BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002460
         (919 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score = 1159 bits (2998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/952 (61%), Positives = 701/952 (73%), Gaps = 93/952 (9%)

Query: 59   ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
            +LR AIST +LLLGK THARI+ S    D FL+NNL+TMYS+CGSL  AR++FD  P+RD
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 119  LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            L++WN+IL AYA S + N  N  EG  LFR LR S+  T+R+TLAP+LKLCL+SG +WA+
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 179  ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
            E VHGYA+KIGL WD FVSGALVNIYSK G++R+A+ LFD M+ERDVVLW +ML+ Y + 
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 239  GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----DLGKRHEEQVQAYAIKLLLYNNN 294
            G  +E F LF + HRSGL PD+ SVQ +L  +S    D GK   +QVQAYA KL L ++N
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDN 866

Query: 295  SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
             +V  WNKKLS  L  GDN GAIECFVNM   N+ YD+VT LV LAAVAGTD+L LG+Q+
Sbjct: 867  PDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQV 926

Query: 355  HGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------C------ 384
            HG  +KSG  S V V NSL+NMYSKMGC                         C      
Sbjct: 927  HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 986

Query: 385  -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                         GL+ D FTLASVLRA SSL +GL++S+QIHVHA+K   +ADSFV+T 
Sbjct: 987  EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046

Query: 432  LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
            LIDVY ++G M EAE+LF+NKD  DLA WNAM+FGYI+ N+  KALELFS +H SGE+ D
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106

Query: 492  EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            +IT+ATA KACGCL++L QGKQ+HA+A+K+GF+ DL V+SGILDMY+KCG MV+A  +FN
Sbjct: 1107 QITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166

Query: 552  DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
             I APDDVAWT+MISGCVDNG ED AL IYH+MR S V+PDE+TFA L+KASSC+TALEQ
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 1226

Query: 612  GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
            GRQ+HAN+IKLDC SDPFVG SLVDMYAKCGNIEDAY LFK+M++RN  LWNAMLVGLAQ
Sbjct: 1227 GRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQ 1286

Query: 672  HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
            HGN EE + LF+ MK+HG+EPD V+FIG+LSACS+ GL SEAYE  H M   YGIEPE+E
Sbjct: 1287 HGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIE 1346

Query: 732  HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
            HYS LVDALGRAG  +EA ++I +MPF+ASAS++RALLGACR+QGD ETGK VA +L AL
Sbjct: 1347 HYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFAL 1406

Query: 792  EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            EPFDS+AYVLLSNI+AAAN+WDDVT AR  MKRKNVKKDP                    
Sbjct: 1407 EPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRS 1466

Query: 832  ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
               AD+I+ KVE ++K I+E GYVPDT+FVLLDVE+EEKER+LYYHSEKLA AYGLISTP
Sbjct: 1467 HPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTP 1526

Query: 889  PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
             S+ I                     +  +E +   ANRFHH RDG+C C D
Sbjct: 1527 ASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGD 1578



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 58   SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
            ++++ +   + L  G+  HA ++    + D F+  +L+ MY++CG++  A RLF KM  R
Sbjct: 1213 TLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR 1272

Query: 118  DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++  WN++L   A  G     N  E   LF+S++       R++   +L  C  +G    
Sbjct: 1273 NIALWNAMLVGLAQHG-----NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 1327

Query: 177  ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            A E +H      G+  +      LV+   + G ++EA  + + M
Sbjct: 1328 AYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 1371


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score = 1050 bits (2714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/960 (56%), Positives = 663/960 (69%), Gaps = 109/960 (11%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           QWF  LR+AI++SDL+LGK THARIL   + P+RFL NNL++MYS+CGSL YARR+FDKM
Sbjct: 41  QWFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           PDRDL+SWNSILAAYA S E   EN+ + F LFR LR+ + +TSR+TL+P+LKLCL SGY
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           VWASE+ HGYA KIGL  DEFV+GALVNIY KFGK++E K LF+ M  RDVVLW +ML+A
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQC---VLGVISDLGKRHEEQVQAYAIKLLLY 291
           Y E GF EE   L    H SGL P++ +++    + G  SD G     QV+++A      
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG-----QVKSFA------ 269

Query: 292 NNN-----SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           N N     S ++  NK LS YL  G     ++CF +M+ S+V+ D VTF++ LA     D
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------------- 381
           +L LGQQ+H   LK G    + V NSLINMY K+                          
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389

Query: 382 ------------CV------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                       C+      CGL+ DQ+T+ SVL+A+SSLPEGL LSKQ+HVHAIK + V
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           +DSFVSTALID Y RN  M EAE LFE +  FDL  WNAM+ GY  S++ HK L+LF+ M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
           H  GER D+ T+AT  K CG L  + QGKQ+HAYA+KSG++LDL VSSGILDMYVKCG M
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             AQ  F+ IP PDDVAWTTMISGC++NGEE+ A  ++ QMRL GV+PDEFT A L KAS
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           SCLTALEQGRQIHAN +KL+C++DPFVG SLVDMYAKCG+I+DAY LFK+++M N   WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           AMLVGLAQHG G+ETL+LF+ MK+ G++PD VTFIGVLSACS++GLVSEAY++   M   
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           YGI+PE+EHYS L DALGRAG  K+A  LI SM  EASASM+R LL ACRVQGDTETGK 
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------- 832
           VA KL+ LEP DSSAYVLLSN++AAA++WD++  AR  MK   VKKDP            
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868

Query: 833 ------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                       +LI+ KV+ +I+ IK+ GYVP+TDF L+DVEEEEKERALYYHSEKLA 
Sbjct: 869 IFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAV 928

Query: 881 AYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           A+GL+STPPS+ I                     + N+E +   ANRFH  +DG+C C D
Sbjct: 929 AFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGD 988


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/969 (55%), Positives = 672/969 (69%), Gaps = 94/969 (9%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           +K   S SS   QWFSILRHAI+ SDL+LGK THA I+ S   PDR++TNNL+TMY++CG
Sbjct: 3   RKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62

Query: 103 SLVYARRLFDKMP--DRDLISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRESITFTSR 159
           SL  AR+LFD  P  DRDL+++N+ILAAYAH+GE  + E   E F +FR LR+S+  T+R
Sbjct: 63  SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            TL+PL KLCL  G   ASE + GYA+KIGL WD FV+GALVNIY+KF +IREA+ LFD 
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD--LGKRH 277
           M  RDVVLW VM++AY E G G+EV  LF   HRSGL PD  SV+ +L  +    + +R 
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE 242

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
            EQV+AYA KL + +++S+V +WNK LS YLQ G+   A++CF +MI+S V  DS+T++V
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------- 383
            L+ VA  ++L LG+QIHG  ++ G+   V V NS INMY K G V              
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 384 ------------------CGLR-----------TDQFTLASVLRASSSLPEGLHLSKQIH 414
                             C LR            DQFT+ SVLRA SSL E   + +Q+H
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
             A+K   V DSFVSTALIDVY + G M EAE LF N+DGFDLA+WNAM+ G+ +S+N  
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL LFS MH  GE+ D+IT A A KA GCL+ L+QGKQ+HA  +K  F  DL V SGIL
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY+KCG M  A+ +FN IP+PDDVAWTT+ISGCV+NGEE+ AL  YHQMRL+GV PDE+
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TFA LVKA S LTALEQG+QIHAN++KL+C+ DPFV  SLVDMYAKCGNIEDAY LF++M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
           + R+  LWNAM+VGLAQHGN EE L  F +MK+ GV PD VTFIGVLSACS++GL S+AY
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
           +NF  M++ YG+EPE+EHYS LVDAL RAG  +EA +++ SMPFEASA+M+R LL ACRV
Sbjct: 723 KNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV 782

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-- 832
           QGD ETG+ VAEKL  ++P DS+AYVLLSNI+AAANQW++  SAR  MKR NVKK+P   
Sbjct: 783 QGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFS 842

Query: 833 ---------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                DLI+ KVE ++KRIKE GYVPDT+F L+D+EEE+KE AL
Sbjct: 843 WIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESAL 902

Query: 872 YYHSEKLARAYGLISTPPSSVI------------------LSN---KEPLY--ANRFHHL 908
            YHSEKLA AYGL+ TPPS+ +                  +SN   +E +   ANRFHH 
Sbjct: 903 SYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHF 962

Query: 909 RDGMCPCAD 917
           R G+C C D
Sbjct: 963 RSGICSCGD 971


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 1040 bits (2689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/953 (57%), Positives = 667/953 (69%), Gaps = 96/953 (10%)

Query: 61   RHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
            R AI+ +DL LGK  HARI+ S  +PDR+LTNNL+TMYS+CGSL  AR++FDK  DRDL+
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 121  SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            +WNSILAAYA   + + ENV EGFRLF  LRE     +RLTLAPLLKLCL SG+V  SET
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 181  VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
            VHGYA+KIG   D FVSGALVNIY K+G + +A+ LFD M ERD VLW VML+AY EN F
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 241  GEEVFHLFVDLHRSGLCPDDESVQCVLG-VISDLG---KRHEEQVQAYAIKLLLYNNNSN 296
             +E    F   HRSG  PD  ++ CV+G V SD+    KRH EQV+AYA+K+  ++  SN
Sbjct: 799  QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858

Query: 297  VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            +  WNKKL+ +L  G    AI+CF  ++RS + +DSVT ++ L+A  G D+L+LG+QIH 
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 357  TTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------------- 383
              +KS F   V V NSL+NMYSK G V                                 
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME 978

Query: 384  --C--------GLRTDQFTLASVLRASSSLPEGLH--LSKQIHVHAIKNDTVADSFVSTA 431
              C        GL+ DQFTLASVLRA S+  EG +  L  Q+HV+AIK   + DSFVSTA
Sbjct: 979  AICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTA 1038

Query: 432  LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
            LID+Y + G M EAE+L   K  FDLA+WNA++FGYI SN S KALE FS MH  G  +D
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPID 1098

Query: 492  EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            EIT+ATA+KA GCL+ LKQGKQ+ AYA+K GF  DL VSSG+LDMY+KCG M +A  +F 
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFG 1158

Query: 552  DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +I  PD+VAWTTMISG ++NG+ED ALS+YH MR+SGV PDE+TFA L+KASSCLTALEQ
Sbjct: 1159 EISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQ 1218

Query: 612  GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
            G+QIHAN++KLD S D FVG SLVDMY KCG+++DAY +F++MD+R  V WNAML+GLAQ
Sbjct: 1219 GKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278

Query: 672  HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
            HG+ +E L LF  M+++G++PD VTFIGVLSACS++GL SEAY+ F  M + YGI PE+E
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIE 1338

Query: 732  HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
            HYS LVDALGRAGR +EA  +I SMPF+ASASM+RALLGACR +GD ET K VA+KL+AL
Sbjct: 1339 HYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLAL 1398

Query: 792  EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            +P DSSAYVLLSNI+AA+ QWDDVT AR  MK KNVKKDP                    
Sbjct: 1399 DPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRS 1458

Query: 832  ---ADLIFAKVEGLIKRIK-EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               A LI+ K+E L+KRI+ EG YVPDTDF LLDVEEEEKERALYYHSEKLA A+GLIST
Sbjct: 1459 HPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLIST 1518

Query: 888  PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            PPS+ I                     L+ +E +   ANRFHH R+G C C D
Sbjct: 1519 PPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGD 1571



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 176/360 (48%), Gaps = 43/360 (11%)

Query: 59   ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
            IL  A+   DL LG+  HA ++ SS  P   ++N+LM MYS+ G +  A + F   P+ D
Sbjct: 900  ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959

Query: 119  LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG----Y 174
            LISWN+++++YA   + N E   E    FR L        + TLA +L+ C S+G    Y
Sbjct: 960  LISWNTMISSYA---QNNLE--MEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEY 1013

Query: 175  VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
                  VH YA+K G++ D FVS AL+++YSK GK+ EA+FL  G  + D+  W  ++  
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFG 1073

Query: 235  YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLY 291
            Y ++    +    F  +H  G+  D+ ++   +   G + +L  +  +Q+QAYAIKL   
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINL--KQGKQIQAYAIKLGFN 1131

Query: 292  NN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            N+                              + V W   +SGY++ GD   A+  +  M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191

Query: 324  IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              S VQ D  TF   + A +    L  G+QIH   +K  +     VG SL++MY K G V
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score = 1040 bits (2688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/953 (57%), Positives = 667/953 (69%), Gaps = 96/953 (10%)

Query: 61   RHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
            R AI+ +DL LGK  HARI+ S  +PDR+LTNNL+TMYS+CGSL  AR++FDK  DRDL+
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 121  SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            +WNSILAAYA   + + ENV EGFRLF  LRE     +RLTLAPLLKLCL SG+V  SET
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 181  VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
            VHGYA+KIG   D FVSGALVNIY K+G + +A+ LFD M ERD VLW VML+AY EN F
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 241  GEEVFHLFVDLHRSGLCPDDESVQCVLG-VISDLG---KRHEEQVQAYAIKLLLYNNNSN 296
             +E    F   HRSG  PD  ++ CV+G V SD+    KRH EQV+AYA+K+  ++  SN
Sbjct: 799  QDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858

Query: 297  VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            +  WNKKL+ +L  G    AI+CF  ++RS + +DSVT ++ L+A  G D+L+LG+QIH 
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 357  TTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------------- 383
              +KS F   V V NSL+NMYSK G V                                 
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME 978

Query: 384  --C--------GLRTDQFTLASVLRASSSLPEGLH--LSKQIHVHAIKNDTVADSFVSTA 431
              C        GL+ DQFTLASVLRA S+  EG +  L  Q+HV+AIK   + DSFVSTA
Sbjct: 979  AICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTA 1038

Query: 432  LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
            LID+Y + G M EAE+L   K  FDLA+WNA++FGYI SN S KALE FS MH  G  +D
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPID 1098

Query: 492  EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            EIT+ATA+KA GCL+ LKQGKQ+ AYA+K GF  DL VSSG+LDMY+KCG M +A  +F 
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFG 1158

Query: 552  DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +I  PD+VAWTTMISG ++NG+ED ALS+YH MR+SGV PDE+TFA L+KASSCLTALEQ
Sbjct: 1159 EISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQ 1218

Query: 612  GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
            G+QIHAN++KLD S D FVG SLVDMY KCG+++DAY +F++MD+R  V WNAML+GLAQ
Sbjct: 1219 GKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278

Query: 672  HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
            HG+ +E L LF  M+++G++PD VTFIGVLSACS++GL SEAY+ F  M + YGI PE+E
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIE 1338

Query: 732  HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
            HYS LVDALGRAGR +EA  +I SMPF+ASASM+RALLGACR +GD ET K VA+KL+AL
Sbjct: 1339 HYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLAL 1398

Query: 792  EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            +P DSSAYVLLSNI+AA+ QWDDVT AR  MK KNVKKDP                    
Sbjct: 1399 DPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRS 1458

Query: 832  ---ADLIFAKVEGLIKRIK-EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               A LI+ K+E L+KRI+ EG YVPDTDF LLDVEEEEKERALYYHSEKLA A+GLIST
Sbjct: 1459 HPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLIST 1518

Query: 888  PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            PPS+ I                     L+ +E +   ANRFHH R+G C C D
Sbjct: 1519 PPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGD 1571



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 176/360 (48%), Gaps = 43/360 (11%)

Query: 59   ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
            IL  A+   DL LG+  HA ++ SS  P   ++N+LM MYS+ G +  A + F   P+ D
Sbjct: 900  ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959

Query: 119  LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG----Y 174
            LISWN+++++YA   + N E   E    FR L        + TLA +L+ C S+G    Y
Sbjct: 960  LISWNTMISSYA---QNNLE--MEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEY 1013

Query: 175  VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
                  VH YA+K G++ D FVS AL+++YSK GK+ EA+FL  G  + D+  W  ++  
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFG 1073

Query: 235  YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLY 291
            Y ++    +    F  +H  G+  D+ ++   +   G + +L  +  +Q+QAYAIKL   
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINL--KQGKQIQAYAIKLGFN 1131

Query: 292  NN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            N+                              + V W   +SGY++ GD   A+  +  M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191

Query: 324  IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              S VQ D  TF   + A +    L  G+QIH   +K  +     VG SL++MY K G V
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score = 1039 bits (2686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/957 (55%), Positives = 658/957 (68%), Gaps = 103/957 (10%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           Q F  LR AISTSDL+LGK THARIL   + P+RFL NNL++MYS+CGSL YARR+FDKM
Sbjct: 48  QCFGFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKM 107

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+RDL+SWNSILAAYA S EG  ENV E F LFR LR+ + +TSR+TL+P+LKLCL SGY
Sbjct: 108 PERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V ASE+ HGYA KIGL  D+FV+GALVNIY KFGK++E + LF+ M  RDVVLW +ML+A
Sbjct: 168 VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA 227

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y E GF EE   L    H SGL P++ +++ +  +  D       QV+++       N N
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGD--DSEAGQVKSFE------NGN 279

Query: 295 -----SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                S ++  NK LSGYL  G     ++CF++M+ S+++ D VTF++ LA     D+L 
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLA 339

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------- 383
           LGQQ+H   LK G    + V NSLINMY K+  +                          
Sbjct: 340 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIA 399

Query: 384 -----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                            CGL+ D +T+ SVL+A+SSLPEGL LSKQIHVHAIK + VADS
Sbjct: 400 QSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS 459

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           FVSTALID Y RN  M EAE LF  ++ FDL  WNAM+ GY  S++ HK LELF+ MH  
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           GER D+ T+AT +K CG L  + QGKQ+HAYA+KSG++LDL VSSGILDMYVKCG M  A
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           Q  F+ IP PDDVAWTT+ISGC++NGEE+ AL ++ QMRL GV+PDEFT A L KASSCL
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           TALEQGRQIHAN +KL+C+SDPFVG SLVDMYAKCG+I+DAY LFK+++M N   WNAML
Sbjct: 639 TALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 698

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
           VGLAQHG G+E L+LF+ M++ G++PD VTFIGVLSACS++GLVSEAY+    M   YGI
Sbjct: 699 VGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGI 758

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
           +PE+EHYS L DALGRAG  KEA  LI SM  EASASM+R LL ACRVQGDTETGK VA 
Sbjct: 759 KPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVAT 818

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------- 832
           KL+ LEP DSSAYVLLSN++AAA++WD++  AR  MK   VKKDP               
Sbjct: 819 KLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFV 878

Query: 833 ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                    +LI+ KV+ +I+ IK+ GYVP+TDF L+DVEEEEKERALYYHSEKLA A+G
Sbjct: 879 VDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFG 938

Query: 884 LISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           L+STPPS+ I                     + ++E +   ANRFH  +DG+C C D
Sbjct: 939 LLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGD 995


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/976 (55%), Positives = 668/976 (68%), Gaps = 108/976 (11%)

Query: 40   PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
            PF+  +H   S    QWFSILRHAI+ SDL LGK  HARIL S   PDRFLTNNL+TMYS
Sbjct: 615  PFIPPAHLIHSIP--QWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYS 672

Query: 100  RCGSLVYARRLFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
            +CGSL  AR+LFD  PD  RDL++WN+IL+A+A       +   +GF LFR LR S    
Sbjct: 673  KCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA-------DKARDGFHLFRLLRRSFVSA 725

Query: 158  SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
            +R TLAP+ K+CL S    A+E++HGYA+KIGL WD FV+GALVNIY+KFG+IREA+ LF
Sbjct: 726  TRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLF 785

Query: 218  DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI----SDL 273
            DGM  RDVVLW VM++AY + G   E   LF + +R+GL PDD ++ C L  +     ++
Sbjct: 786  DGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL-CTLARVVKSKQNV 844

Query: 274  GKRHEEQVQAYAIKLLLYNN---NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
             +   +Q++AY  KL +Y++    S+V+ WNK LS +LQ G+   A++CFV+MI S V  
Sbjct: 845  LEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904

Query: 331  DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-- 388
            D +TF+V L+ VAG + L LG+QIHG  ++SG    V VGN LINMY K G V   RT  
Sbjct: 905  DGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964

Query: 389  -----------------------------------------DQFTLASVLRASSSLPEGL 407
                                                     DQFT+ASVLRA SSL  G 
Sbjct: 965  WQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGC 1024

Query: 408  HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
            HL+ QIH  A+K   V DSFVST LIDVY ++G M EAE+LF N+DGFDLA+WNAM+ GY
Sbjct: 1025 HLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGY 1084

Query: 468  ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            I+S +  KAL L+  M  SGER ++IT+A A KA G L+ LKQGKQ+ A  +K GF LDL
Sbjct: 1085 IVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDL 1144

Query: 528  CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
             V SG+LDMY+KCG M  A+ IFN+IP+PDDVAWTTMISGCV+NG+E+ AL  YH MRLS
Sbjct: 1145 FVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLS 1204

Query: 588  GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
             V PDE+TFA LVKA S LTALEQGRQIHAN +KL+C+ DPFV  SLVDMYAKCGNIEDA
Sbjct: 1205 KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDA 1264

Query: 648  YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
              LFK+ +      WNAM+VGLAQHGN EE L+ FE+MK+ GV PD VTFIGVLSACS++
Sbjct: 1265 RGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHS 1324

Query: 708  GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
            GLVSEAYENF+ M++ YGIEPE+EHYS LVDAL RAGR +EA ++I SMPFEASASM+R 
Sbjct: 1325 GLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRT 1384

Query: 768  LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
            LL ACRVQ D ETGK VAEKL+ALEP DS+AYVLLSN++AAANQW++V SAR  M++ NV
Sbjct: 1385 LLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANV 1444

Query: 828  KKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
            KKDP                        D+I+ KVE ++KRI+E GY+PDTDF L+DVEE
Sbjct: 1445 KKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEE 1504

Query: 865  EEKERALYYHSEKLARAYGLISTPPSSV--ILSN-------------------KEPLY-- 901
            E+KE +LYYHSEKLA AYGL+ TPPS+   ++ N                   +E +   
Sbjct: 1505 EDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRD 1564

Query: 902  ANRFHHLRDGMCPCAD 917
            ANRFHH R G+C C D
Sbjct: 1565 ANRFHHFRSGVCSCGD 1580


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score = 1031 bits (2665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/971 (55%), Positives = 668/971 (68%), Gaps = 99/971 (10%)

Query: 40   PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
            P   ++H   S    Q FSILR AI+ SDL LGK  HARIL S   PDRF+TNNL+TMY+
Sbjct: 645  PLTPRAHLIHSLP--QCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYA 702

Query: 100  RCGSLVYARRLFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
            +CGSL  AR+LFD  PD  RDL++WN+IL+A A     +A+   +GF LFR LR S+  T
Sbjct: 703  KCGSLSSARKLFDTTPDTNRDLVTWNAILSALA----AHADKSHDGFHLFRLLRRSVVST 758

Query: 158  SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
            +R TLAP+ K+CL S    ASE++HGYA+KIGL WD FV+GALVNIY+KFG IREA+ LF
Sbjct: 759  TRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLF 818

Query: 218  DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
            DGM  RDVVLW VM++AY +     E   LF + HR+G  PDD +++ +  V+       
Sbjct: 819  DGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNIL 878

Query: 278  E-EQVQAYAIKLLLYNNN-SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
            E +Q +AYA KL +Y+++ S+V++WNK LS +LQ G+   A++CFV+MI S V  D +TF
Sbjct: 879  ELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTF 938

Query: 336  LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT------- 388
            +V L  VAG + L LG+QIHG  ++SG    V VGN LINMY K G V   R+       
Sbjct: 939  VVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNE 998

Query: 389  ------------------------------------DQFTLASVLRASSSLPEGLHLSKQ 412
                                                DQFT+ASVLRA SSL  G +L+ Q
Sbjct: 999  VDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQ 1058

Query: 413  IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
            IH  A+K   V DSFVSTALIDVY + G M EAE+LF N+DGFDLA+WNA++ GYI+S +
Sbjct: 1059 IHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGD 1118

Query: 473  SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
              KAL L+  M  SGER D+IT+  A KA G L+ LKQGKQ+HA  +K GF LDL V+SG
Sbjct: 1119 FPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSG 1178

Query: 533  ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
            +LDMY+KCG M  A+ +F++IP+PDDVAWTTMISGCV+NG+E+ AL  YHQMRLS V PD
Sbjct: 1179 VLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPD 1238

Query: 593  EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            E+TFA LVKA S LTALEQGRQIHAN++KL+C+ DPFV  SLVDMYAKCGNIEDA  LFK
Sbjct: 1239 EYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFK 1298

Query: 653  QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
            + + R    WNAM+VGLAQHGN +E L+ F+ MK+ GV PD VTFIGVLSACS++GLVSE
Sbjct: 1299 RTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSE 1358

Query: 713  AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            AYENF+ M++ YGIEPE+EHYS LVDAL RAGR +EA ++I SMPFEASASM+R LL AC
Sbjct: 1359 AYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNAC 1418

Query: 773  RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
            RVQ D ETGK VAEKL+ALEP DS+AYVLLSN++AAANQW++V SAR  M++ NVKKDP 
Sbjct: 1419 RVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPG 1478

Query: 833  -----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                   D+I+ KVE ++KRI+E GYVPDTDF L+DVEEE+KE 
Sbjct: 1479 FSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKEC 1538

Query: 870  ALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFH 906
            +LYYHSEKLA AYGL+ TPPS+ +                     +  +E +   ANRFH
Sbjct: 1539 SLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFH 1598

Query: 907  HLRDGMCPCAD 917
            H R+G+C C D
Sbjct: 1599 HFRNGICSCGD 1609



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 20/275 (7%)

Query: 15   HTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKS 74
            H Y++   F K         +L L   +Q+S     S      +  + A     L  GK 
Sbjct: 1111 HGYIVSGDFPK---------ALRLYILMQES--GERSDQITLVNAAKAAGGLVGLKQGKQ 1159

Query: 75   THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
             HA ++      D F+T+ ++ MY +CG +  ARR+F ++P  D ++W ++++       
Sbjct: 1160 IHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMIS------- 1212

Query: 135  GNAENVTEGFRLF--RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            G  EN  E   LF    +R S       T A L+K C     +     +H   +K+   +
Sbjct: 1213 GCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAF 1272

Query: 193  DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
            D FV  +LV++Y+K G I +A+ LF     R +  W  M+   A++G  +E    F  + 
Sbjct: 1273 DPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMK 1332

Query: 253  RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
              G+ PD  +   VL   S  G   E     Y+++
Sbjct: 1333 SRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQ 1367


>gi|255550217|ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223544645|gb|EEF46161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1439

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/769 (59%), Positives = 556/769 (72%), Gaps = 61/769 (7%)

Query: 5    LQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAI 64
            L++NLKP       IFS  +  +Y        SLL F  +    SS SSSQ FS+LR A+
Sbjct: 669  LKSNLKPDS-----IFSLKSPHSY--------SLLSFPFRFSSLSSPSSSQCFSLLRAAV 715

Query: 65   STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
            STS+L LGK  HA I+ S    DRFL NNL+TMYS+CGS+  AR+LFD+ PDRDL++WN+
Sbjct: 716  STSNLHLGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDRDLVTWNA 775

Query: 125  ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
            +L+AYA S E   ++V EGF +FR LRE    TS+LTLAP+LKLCL SGYV AS+ VHGY
Sbjct: 776  VLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLCLLSGYVCASQAVHGY 835

Query: 185  ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            A+KIGL  D FVSGALVNIYSKFG +REA+ LFD MQERDVVLW VML+AY E G  +E 
Sbjct: 836  AVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYVEMGLVKEA 895

Query: 245  FHLFVDLHRSGLCPDDESVQCVLGVIS----DLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
               F   H+SGL PDD S++CV+  IS    D G+R+ EQ+QAYA KL   ++N++VV+W
Sbjct: 896  LSFFSQFHQSGLRPDDASMRCVVSGISEVGYDTGRRYIEQIQAYATKLFFCDDNTDVVMW 955

Query: 301  NKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
            NKKLS YLQ G    A++CF+NM+  S+V+YD+VT +V LAA  GT +L LG+ IHG TL
Sbjct: 956  NKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAATGTGDLMLGKLIHGMTL 1015

Query: 360  KSGFYSAVIVGNSLINMYSKMGCVC----------------------------------- 384
            KSGF S V V NSLINMYSKMG V                                    
Sbjct: 1016 KSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVN 1075

Query: 385  --------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                    GL+ D FTLASVL+A SSL EGL LSKQIHV+  K   +A++FVSTALIDVY
Sbjct: 1076 LLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALIDVY 1135

Query: 437  CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
             R+G MAEAE++FENK+ FDLA WNAM+FGYI+  +  K L+LF+ MH  GE  DE T+A
Sbjct: 1136 SRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLA 1195

Query: 497  TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
            TA KACG L+ L+QGKQ+HA A+K G   DL +SSGILDMY+KCG M D   +F++IP P
Sbjct: 1196 TAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPVP 1255

Query: 557  DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
            DDVAWT MISGCV+NG+ED ALS+Y QMRLSG++PDE+TFA L+KASSCLTALEQGRQIH
Sbjct: 1256 DDVAWTIMISGCVENGDEDRALSVYRQMRLSGILPDEYTFATLIKASSCLTALEQGRQIH 1315

Query: 617  ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
            AN+IKL+C+SDPFVG SL+DMYAKCG IEDAY LF++MD+RN V+WNAMLV LAQHG+GE
Sbjct: 1316 ANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRRMDVRNIVVWNAMLVSLAQHGHGE 1375

Query: 677  ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
            E L LF+ M++H ++PD VTFIGVLSACS++G VSEAY +FH M + YG
Sbjct: 1376 EALHLFKVMQSHSIKPDKVTFIGVLSACSHSGHVSEAYGHFHSMHKDYG 1424


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/816 (48%), Positives = 514/816 (62%), Gaps = 98/816 (12%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LL+  +S+  +   +  H   +  G   D F+S  L+ +YSK G +  A+ +FD   ERD
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 225 VVLWKVMLRAYA-----ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHE 278
           +V W  +L AYA      +G  +E  HLF  L  S       ++  VL +  + G     
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSG-----YLQVGDNHGAIECFVNMIRSNVQYDSV 333
           E V  YAIK+ L         W+  +SG     Y + G    A   F + +R   + D V
Sbjct: 203 EGVHGYAIKIGLE--------WDVFVSGALVNIYSKCGRMRDARLLF-DWMR---ERDVV 250

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
            + + L        + LG +     L S F+ +                  GLR D+F++
Sbjct: 251 LWNMMLKGY-----VQLGLEKEAFQLFSEFHRS------------------GLRPDEFSV 287

Query: 394 ASVLRASS-SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
             +L     +  + L L KQ+H  A+K+   +D  V+ +L+++Y + G    A  +F + 
Sbjct: 288 QLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM 347

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE-----ITIATAVKACGCLLM 507
              DL +WN+MI     S+   +++ LF  +   G + D      IT+ATA KACGCL++
Sbjct: 348 KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVL 407

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L QGKQ+HA+A+K+GF+ DL V+SGILDMY+KCG MV+A  +FN I APDDVAWT+MISG
Sbjct: 408 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 467

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           CVDNG ED AL IYH+MR S V+PDE+TFA L+KASSC+TALEQGRQ+HAN+IKLDC SD
Sbjct: 468 CVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD 527

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           PFVG SLVDMYAKCGNIEDAY LFK+M++RN  LWNAMLVGLAQHGN EE + LF+ MK+
Sbjct: 528 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 587

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
           HG+EPD V+FIG+LSACS+ GL SEAYE  H M   YGIEPE+EHYS LVDALGRAG  +
Sbjct: 588 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 647

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA ++I +MPF+ASAS++RALLGACR+QGD ETGK VA +L ALEPFDS+AYVLLSNI+A
Sbjct: 648 EADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYA 707

Query: 808 AANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIK 844
           AAN+WDDVT AR  MKRKNVKKDP                       AD+I+ KVE ++K
Sbjct: 708 AANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMK 767

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----------- 893
            I+E GYVPDT+FVLLDVE+EEKER+LYYHSEKLA AYGLISTP S+ I           
Sbjct: 768 TIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGD 827

Query: 894 ----------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                     +  +E +   ANRFHH RDG+C C D
Sbjct: 828 CHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGD 863



 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 212/576 (36%), Positives = 314/576 (54%), Gaps = 81/576 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR AIST +LLLGK THARI+ S    D FL+NNL+TMYS+CGSL  AR++FD  P+RD
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L++WN+IL AYA S + N  N  EG  LFR LR S+  T+R+TLAP+LKLCL+SG +WA+
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E VHGYA+KIGL WD FVSGALVNIYSK G++R+A+ LFD M+ERDVVLW +ML+ Y + 
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE---QVQAYAIKLLLYNNNS 295
           G  +E F LF + HRSGL PD+ SVQ +L      G    E   QV   A+K  L ++ S
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 296 ----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       +++ WN  +S   Q      ++  F++++   
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382

Query: 328 VQYD-----SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-- 380
           ++ D     S+T   A  A      L+ G+QIH   +K+GF S + V + +++MY K   
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 442

Query: 381 ------------------------GCV------CGLRT-----------DQFTLASVLRA 399
                                   GCV        LR            D++T A++++A
Sbjct: 443 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 502

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           SS +   L   +Q+H + IK D V+D FV T+L+D+Y + G++ +A  LF+  +  ++A 
Sbjct: 503 SSCVT-ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL 561

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYA 518
           WNAM+ G     N+ +A+ LF  M + G   D ++    + AC    +  +  + +H+  
Sbjct: 562 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMP 621

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
              G E ++   S ++D   + G + +A  +   +P
Sbjct: 622 NDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 657


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/501 (65%), Positives = 389/501 (77%), Gaps = 46/501 (9%)

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           M+FGYI+ N+  KALELFS +H SGE+ D+IT+ATA KACGCL++L QGKQ+HA+A+K+G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F+ DL V+SGILDMY+KCG MV+A  +FN I APDDVAWT+MISGCVDNG ED AL IYH
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +MR S V+PDE+TFA L+KASSC+TALEQGRQ+HAN+IKLDC SDPFVG SLVDMYAKCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           NIEDAY LFK+M++RN  LWNAMLVGLAQHGN EE + LF+ MK+HG+EPD V+FIG+LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           ACS+ GL SEAYE  H M   YGIEPE+EHYS LVDALGRAG  +EA ++I +MPF+ASA
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
           S++RALLGACR+QGD E GK VA +L ALEPFDS+AYVLLSNI+AAAN+WDDVT AR  M
Sbjct: 301 SINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 360

Query: 823 KRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
           KRKNVKKDP                       AD+I+ KVE ++K I+E GYVPDT+FVL
Sbjct: 361 KRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVL 420

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKE 898
           LDVE+EEKER+LYYHSEKLA AYGLISTP S+ I                     +  +E
Sbjct: 421 LDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFERE 480

Query: 899 PLY--ANRFHHLRDGMCPCAD 917
            +   ANRFHH RDG+C C D
Sbjct: 481 IVLRDANRFHHFRDGVCSCGD 501



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 6/287 (2%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G ++DQ TLA+  +A   L   L   KQIH HAIK    +D  V++ ++D+Y + G M  
Sbjct: 25  GEKSDQITLATAAKACGCLVL-LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN 83

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      D   W +MI G + + N  +AL ++  M  S    DE T AT +KA  C
Sbjct: 84  AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 143

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           +  L+QG+Q+HA  +K     D  V + ++DMY KCG + DA  +F  +   +   W  M
Sbjct: 144 VTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAM 203

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF-AILVKASSCLTALEQGRQIHANLIKLD 623
           + G   +G  + A++++  M+  G+ PD  +F  IL   S      E    +H+  +  D
Sbjct: 204 LVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHS--MPND 261

Query: 624 CSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
              +P +     LVD   + G +++A  + + M  + +   N  L+G
Sbjct: 262 YGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 45/293 (15%)

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY+   D   A+E F  + +S  + D +T   A  A      L+ G+QIH   +K+GF S
Sbjct: 4   GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63

Query: 366 AVIVGNSLINMYSKM--------------------------GCV------CGLR------ 387
            + V + +++MY K                           GCV        LR      
Sbjct: 64  DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123

Query: 388 -----TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                 D++T A++++ASS +   L   +Q+H + IK D V+D FV T+L+D+Y + G++
Sbjct: 124 QSRVMPDEYTFATLIKASSCVT-ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 182

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A  LF+  +  ++A WNAM+ G     N+ +A+ LF  M + G   D ++    + AC
Sbjct: 183 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 242

Query: 503 GCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
               +  +  + +H+     G E ++   S ++D   + G + +A  +   +P
Sbjct: 243 SHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 295



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA  + +    D  + + ++ MY +CG +V A  +F+ +   D ++W S+++    
Sbjct: 49  GKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 108

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G     N  +  R++  +R+S       T A L+K       +     +H   +K+  V
Sbjct: 109 NG-----NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCV 163

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV  +LV++Y+K G I +A  LF  M  R++ LW  ML   A++G  EE  +LF  +
Sbjct: 164 SDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 223

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
              G+ PD  S   +L   S  G
Sbjct: 224 KSHGIEPDRVSFIGILSACSHAG 246



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++++ +   + L  G+  HA ++    + D F+  +L+ MY++CG++  A RLF KM  R
Sbjct: 136 TLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR 195

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
           ++  WN++L   A  G     N  E   LF+S++       R++   +L  C  +G    
Sbjct: 196 NIALWNAMLVGLAQHG-----NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 250

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           A E +H      G+  +      LV+   + G ++EA  + + M
Sbjct: 251 AYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 29/231 (12%)

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           +   LF  + +S   + ++TLA   K C     +   + +H +A+K G   D  V+  ++
Sbjct: 13  KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 72

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y K G +  A  +F+ +   D V W  M+    +NG  ++   ++  + +S + PD+ 
Sbjct: 73  DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 132

Query: 262 SVQCVLGVISDLGKRHE-EQVQAYAIKLLLYN---------------------------- 292
           +   ++   S +    +  Q+ A  IKL   +                            
Sbjct: 133 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 192

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           N  N+ LWN  L G  Q G+   A+  F +M    ++ D V+F+  L+A +
Sbjct: 193 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243


>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 351/693 (50%), Positives = 446/693 (64%), Gaps = 57/693 (8%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LL+  +S+  +   +  H   +  G   D F++  L+ +YSK G +  A  +FD   ERD
Sbjct: 90  LLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERD 149

Query: 225 VVLWKVMLRAYA-----ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           +V W  +L AYA      +G  +E  HLF  L  S       ++  VL + S+       
Sbjct: 150 LVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAA 209

Query: 280 Q-VQAYAIKL--------------------------LLYN--NNSNVVLWNKKLSGYLQV 310
           + V  YAIK+                          LL++     +VVLWN  L GY+Q+
Sbjct: 210 KGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQL 269

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ----QIHGTTLK---SGF 363
           G    A + F    RS +  D  +  + L  V    N + G+    Q+     K   S  
Sbjct: 270 GLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEV-NXDEGKWHADQVQAYXXKLSLSDD 328

Query: 364 YSAVIVGNSLINMYSKMG-------CVCGLRT-----DQFTLASVLRASSSLPEGLHLSK 411
              V   N  ++ Y   G       C   +       D  TL  VL A   + +GL++S+
Sbjct: 329 NXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAA---VADGLNISR 385

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           QIHVHA+K   +ADSFV+TALIDVY R+G M EAE LF+NKD  DLA WNAM+FGYI+SN
Sbjct: 386 QIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISN 445

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           + +KAL LFS ++ SGE+ D+IT+ATA KACGCL++L ZGKQ+HA+ +K+GF  DL V+S
Sbjct: 446 DGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIKAGFXSDLYVNS 505

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
           GILDMY+KCG MV+A  +FN I APDDVAWT+MISGCVDNG ED AL IYHQMR SGV+P
Sbjct: 506 GILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSGVMP 565

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           DE+TFA L+KASS +TALEQGRQ+HAN+IKLDC SDPFVG SLVDMYAKCGNIED Y LF
Sbjct: 566 DEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDXYRLF 625

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           K+M++RN VLWNAMLVG+AQHGN EE + LF+ MK+HG+EPD V+FIG+LSACS  GL S
Sbjct: 626 KKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSLAGLTS 685

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           EAYE FH M    GIEPE+EHYS LVDALG AG  +E  ++I +MPF+ASASM+RALLGA
Sbjct: 686 EAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVIETMPFKASASMNRALLGA 745

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           CR+QGD E GK VA +L ALEPFDS+AY   S+
Sbjct: 746 CRIQGDVEIGKRVAARLFALEPFDSAAYGFFSH 778



 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/663 (41%), Positives = 380/663 (57%), Gaps = 53/663 (7%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           QWFS+LR AIST +LLLGK THARI+ S    D FLTNNL+T+YS+CGSL +A ++FD  
Sbjct: 86  QWFSLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTT 145

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+RDL++WN+IL AYA S + N  N  EG  LFR LRES+  T+R+TLAP+LKLC +S  
Sbjct: 146 PERDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXC 205

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +WA++ VHGYA+KIGLVWD FV G L+NIYSK G++ +A+ LFDGM+ERDVVLW +ML+ 
Sbjct: 206 LWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKG 265

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG----VISDLGKRHEEQVQAYAIKLLL 290
           Y + G  +E F LF + HRSGL PD+ SVQ +L     V  D GK H +QVQAY  KL L
Sbjct: 266 YVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSL 325

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            ++N +V  WNKKLS YL  GDN GAIECFVNM   NV YD VT L  LAAVA  D LN+
Sbjct: 326 SDDNXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVA--DGLNI 383

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------CVC---------- 384
            +QIH   LK+   +   V  +LI++YS+ G                  C          
Sbjct: 384 SRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYII 443

Query: 385 -----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G ++DQ TLA+  +A   L   L   KQIH H IK    +D +
Sbjct: 444 SNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVL-LDZGKQIHAHVIKAGFXSDLY 502

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V++ ++D+Y + G M  A  +F      D   W +MI G + + N  +AL ++  M  SG
Sbjct: 503 VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSG 562

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              DE T AT +KA   +  L+QG+Q+HA  +K     D  V + ++DMY KCG + D  
Sbjct: 563 VMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDXY 622

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F  +   + V W  M+ G   +G  + A++++  M+  G+ PD  +F  ++ A S L 
Sbjct: 623 RLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS-LA 681

Query: 608 ALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
            L      + + +  DC  +P +     LVD     G +++   + + M  + +   N  
Sbjct: 682 GLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVIETMPFKASASMNRA 741

Query: 666 LVG 668
           L+G
Sbjct: 742 LLG 744


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 312/985 (31%), Positives = 481/985 (48%), Gaps = 127/985 (12%)

Query: 53   SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
            S  + +IL+  +   D+LL K  H  I+ S    + ++ N L+ +Y RCG L  AR++FD
Sbjct: 118  SFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFD 177

Query: 113  KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            K+  +++  W +++  YA  G        +  R++  +R+     + +T   +LK C   
Sbjct: 178  KLLKKNIYIWTTMIGGYAEYGHAE-----DAMRVYDKMRQECGQPNEITYLSILKACCCP 232

Query: 173  GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
              +   + +H + ++ G   D  V  ALVN+Y K G I +A+ +FD M ER+V+ W VM+
Sbjct: 233  VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292

Query: 233  RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQA-YA 285
               A  G G+E FHLF+ + R G  P+  +   +L      G +  + + H   V A  A
Sbjct: 293  GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352

Query: 286  IKLLLYN------------NNSNVVL----------WNKKLSGYLQVGDNHGAIECFVNM 323
            + L + N            +++ VV           W   + G  Q G    A   F+ M
Sbjct: 353  LDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412

Query: 324  IRSNVQYDSVTFLVAL--AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             R+    +  T+L  L  +A+A T  L   + +H    ++GF S + +GN+LI+MY+K G
Sbjct: 413  QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCG 472

Query: 382  CV-----------------------------CG--------------LRTDQFTLASVLR 398
             +                             CG              L  D  T  S+L 
Sbjct: 473  SIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532

Query: 399  ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
               S  + L    ++H HA++   ++D  V +A I +Y R GS+ +A  LF+      + 
Sbjct: 533  THGS-TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVT 591

Query: 459  TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            TWNAMI G        +AL LF  M   G   D  T    + A      L+  K++H++A
Sbjct: 592  TWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHA 651

Query: 519  MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
              +G  +DL V + ++  Y KCG +  A+ +F+D+   +   WT MI G   +G    A 
Sbjct: 652  TDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAF 710

Query: 579  SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
            S + QM   G+VPD  T+  ++ A +   ALE  +++H + +     SD  VG +LV MY
Sbjct: 711  SHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMY 770

Query: 639  AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
            AKCG+I+DA  +F  M  R+   W  M+ GLAQHG G E L  F  MK+ G +P+  +++
Sbjct: 771  AKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYV 830

Query: 699  GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
             VL+ACS+ GLV E    F  M + YGIEP +EHY+ +VD LGRAG  +EA   IL+MP 
Sbjct: 831  AVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPI 890

Query: 759  EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
            E   +   ALLGAC   G+ E  ++ A++ + L+P  +S YVLLSNI+AA  +W+     
Sbjct: 891  EPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLV 950

Query: 819  RGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDT 855
            R  M+RK ++K+P                       +  I+A++  LI+R+K  GYVPDT
Sbjct: 951  RSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDT 1010

Query: 856  DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------L 894
              VL + ++E KE+AL  HSEKLA  YGL+ T     I                     +
Sbjct: 1011 RLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKI 1070

Query: 895  SNKEPLY--ANRFHHLRDGMCPCAD 917
            + +E +   A RFHH +DG+C C D
Sbjct: 1071 TGREIVARDAKRFHHFKDGVCSCGD 1095



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 186/319 (58%), Gaps = 1/319 (0%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  D F+  ++L+      E + L+KQ+HV  IK+    + +V+  L+ VY R G +  
Sbjct: 113 GIAIDSFSYVNILQRCLK-QEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     ++  W  MI GY    ++  A+ ++  M     + +EIT  + +KAC C
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            + LK GK++HA+ ++SGF+ D+ V + +++MYVKCG++ DAQ IF+ +   + ++WT M
Sbjct: 232 PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM 291

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G    G    A  ++ QM+  G +P+ +T+  ++ A++   ALE  +++H++ +    
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           + D  VG +LV MYAK G+I+DA ++F  M  R+   W  M+ GLAQHG G+E   LF  
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411

Query: 685 MKAHGVEPDSVTFIGVLSA 703
           M+ +G  P+  T++ +L+A
Sbjct: 412 MQRNGCLPNLTTYLSILNA 430



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 267/614 (43%), Gaps = 85/614 (13%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FLQ        +S  + SIL    S   L   K  H+  +N+    D  + N L+ MY++
Sbjct: 308 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 367

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES---ITFT 157
            GS+  AR +FD M +RD+ SW  ++   A  G G      E F LF  ++ +      T
Sbjct: 368 SGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQ-----EAFSLFLQMQRNGCLPNLT 422

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           + L++     +  +S   W  + VH +A + G + D  +  AL+++Y+K G I +A+ +F
Sbjct: 423 TYLSILNASAIASTSALEWV-KVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV------IS 271
           DGM +RDV+ W  M+   A+NG G E F +F+ + + GL PD  +   +L        + 
Sbjct: 482 DGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALE 541

Query: 272 DLGKRHEEQVQAYAIK---------------------LLLYNNNS--NVVLWNKKLSGYL 308
            + + H+  V+   I                       LL++  S  +V  WN  + G  
Sbjct: 542 WVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAA 601

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q      A+  F+ M R     D+ TF+  L+A    + L   +++H     +G    + 
Sbjct: 602 QQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVD-LR 660

Query: 369 VGNSLINMYSKMGCV-----------------------------C--------------G 385
           VGN+L++ YSK G V                             C              G
Sbjct: 661 VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG 720

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +  D  T  S+L A +S    L   K++H HA+    V+D  V  AL+ +Y + GS+ +A
Sbjct: 721 IVPDATTYVSILSACAS-TGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDA 779

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F++    D+ +W  MI G        +AL+ F  M + G + +  +    + AC   
Sbjct: 780 RSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHA 839

Query: 506 LMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
            ++ +G +Q  +     G E  +   + ++D+  + G + +A+    ++P  PDD  W  
Sbjct: 840 GLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGA 899

Query: 564 MISGCVDNGEEDLA 577
           ++  CV  G  ++A
Sbjct: 900 LLGACVTYGNLEMA 913


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 308/980 (31%), Positives = 475/980 (48%), Gaps = 124/980 (12%)

Query: 56   WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
            + SIL    S ++L  GK  H++I+ +    D  + N+L++MY +CG L  AR++F  + 
Sbjct: 131  YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190

Query: 116  DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
             RD++S+N++L  YA         V E   LF  +        ++T   LL    +   +
Sbjct: 191  PRDVVSYNTMLGLYAQKA-----YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245

Query: 176  WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
               + +H   ++ GL  D  V  ALV +  + G +  AK  F G  +RDVV++  ++ A 
Sbjct: 246  DEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAAL 305

Query: 236  AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK---------RHEEQV 281
            A++G   E F  +  +   G+  +  +   +L   S     + GK          H   V
Sbjct: 306  AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365

Query: 282  Q---------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
            Q                 A +L       +++ WN  ++GY +  D   A+  +  M   
Sbjct: 366  QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425

Query: 327  NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---- 382
             V+   VTFL  L+A A +     G+ IH   L+SG  S   + N+L+NMY + G     
Sbjct: 426  GVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485

Query: 383  ------------------VCG---------------------LRTDQFTLASVLRASSSL 403
                              + G                     L  D  T ASVL    + 
Sbjct: 486  QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN- 544

Query: 404  PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            PE L L KQIH    ++    D  +  ALI++Y R GS+ +A  +F +    D+ +W AM
Sbjct: 545  PEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAM 604

Query: 464  IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
            I G        KA+ELF  M   G R  + T ++ +K C     L +GK++ AY + SG+
Sbjct: 605  IGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGY 664

Query: 524  ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            ELD  V + ++  Y K G+M DA+ +F+ +P+ D V+W  +I+G   NG    A+   +Q
Sbjct: 665  ELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQ 724

Query: 584  MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            M+   VVP++F+F  L+ A S  +ALE+G+++HA ++K     D  VG +L+ MYAKCG+
Sbjct: 725  MQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGS 784

Query: 644  IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
              +A  +F  +  +N V WNAM+   AQHG   + L  F  M+  G++PD  TF  +LSA
Sbjct: 785  QGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSA 844

Query: 704  CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
            C++ GLV E Y+ F  M  +YG+ P +EHY  LV  LGRA R +EA  LI  MPF   A+
Sbjct: 845  CNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAA 904

Query: 764  MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
            +   LLGACR+ G+    +  A   + L   + + Y+LLSN++AAA +WDDV   R  M+
Sbjct: 905  VWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVME 964

Query: 824  RKNVKKDP----------------ADL-------IFAKVEGLIKRIKEGGYVPDTDFVLL 860
             + ++K+P                AD        I+A+++ L   ++E GY PDT  VL 
Sbjct: 965  GRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLH 1024

Query: 861  DVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEP 899
            D+ +  +E +L  HSE+LA AYGLI TPP + I                     L  +E 
Sbjct: 1025 DLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREI 1084

Query: 900  LY--ANRFHHLRDGMCPCAD 917
            +   +NRFH  ++G C C D
Sbjct: 1085 IARDSNRFHSFKNGKCSCED 1104



 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 208/775 (26%), Positives = 376/775 (48%), Gaps = 77/775 (9%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           + +  + + ++L++      L   K  HA+++ +   PD FL+N L+ MY +C S++ A 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           ++F +MP RD+ISWNS+++ YA  G        + F+LF  ++ +    +++T   +L  
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKK-----KAFQLFEEMQNAGFIPNKITYISILTA 137

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C S   +   + +H   +K G   D  V  +L+++Y K G +  A+ +F G+  RDVV +
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-HEEQVQ 282
             ML  YA+  + +E   LF  +   G+ PD  +   +L   +     D GKR H+  V+
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257

Query: 283 A-----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                    A +      + +VV++N  ++   Q G N  A E 
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQ 317

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           +  M    V  +  T+L  L A + +  L  G+ IH    + G  S V +GN+LI+MY++
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYAR 377

Query: 380 MGCVCGLRTDQFTL---------------------ASVLR-----ASSSLPEG----LHL 409
            G +   R   +T+                        +R      S  +  G    LHL
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437

Query: 410 ------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                        K IH   +++   ++  ++ AL+++Y R GS+ EA+ +FE     D+
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDV 497

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN+MI G+    +   A +LF  M       D IT A+ +  C     L+ GKQ+H  
Sbjct: 498 ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
             +SG +LD+ + + +++MY++CG++ DA+++F+ +   D ++WT MI GC D GE+  A
Sbjct: 558 ITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKA 617

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           + ++ QM+  G  P + TF+ ++K  +    L++G+++ A ++      D  VG +L+  
Sbjct: 618 IELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISA 677

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+K G++ DA  +F +M  R+ V WN ++ G AQ+G G+  ++    M+   V P+  +F
Sbjct: 678 YSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSF 737

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           + +L+ACS    + E  +  H    K  ++ +V   + L+    + G   EA E+
Sbjct: 738 VSLLNACSSFSALEEG-KRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEV 791



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 173/712 (24%), Positives = 307/712 (43%), Gaps = 88/712 (12%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F Q S    S     + ++L    + S L  GK  H   +      D  +   L+TM  R
Sbjct: 217 FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG +  A++ F    DRD++ +N+++AA A  G        E F  +  +R      +R 
Sbjct: 277 CGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHN-----VEAFEQYYRMRSDGVALNRT 331

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L  C +S  + A + +H +  + G   D  +  AL+++Y++ G + +A+ LF  M
Sbjct: 332 TYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM 391

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GK 275
            +RD++ W  ++  YA      E   L+  +   G+ P   +   +L   ++      GK
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451

Query: 276 RHEEQVQAYAIK---------LLLY---------------NNNSNVVLWNKKLSGYLQVG 311
              E +    IK         + +Y                   +V+ WN  ++G+ Q G
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A + F  M    ++ D++TF   L+     + L LG+QIHG   +SG    V +GN
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571

Query: 372 SLINMYSKMGCV------------------------C-------------------GLRT 388
           +LINMY + G +                        C                   G R 
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRP 631

Query: 389 DQFTLASVLR---ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + T +S+L+   +S+ L EG    K++  + + +    D+ V  ALI  Y ++GSM +A
Sbjct: 632 VKSTFSSILKVCTSSACLDEG----KKVIAYILNSGYELDTGVGNALISAYSKSGSMTDA 687

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     D+ +WN +I GY  +     A+E    M       ++ +  + + AC   
Sbjct: 688 REVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSF 747

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L++GK++HA  +K   + D+ V + ++ MY KCG+  +AQ +F++I   + V W  MI
Sbjct: 748 SALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMI 807

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +    +G    AL  ++ M   G+ PD  TF  ++ A +    + +G QI +++ + +  
Sbjct: 808 NAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSM-ESEYG 866

Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN 674
             P +     LV +  +    ++A  L  QM    +  +W  +L     HGN
Sbjct: 867 VLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 918



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 205/395 (51%), Gaps = 8/395 (2%)

Query: 388 TDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           T++ T  ++L+  +    LPE    +K+IH   ++     D F+S  LI++Y +  S+ +
Sbjct: 25  TERATYVALLQNCTRKRLLPE----AKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D+ +WN++I  Y       KA +LF  M  +G   ++IT  + + AC  
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
              L+ GK++H+  +K+G++ D  V + +L MY KCG +  A+ +F  I   D V++ TM
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +            L ++ QM   G+ PD+ T+  L+ A +  + L++G++IH   ++   
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           +SD  VG +LV M  +CG+++ A   FK    R+ V++NA++  LAQHG+  E  + +  
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M++ GV  +  T++ +L+ACS T    EA +  H    + G   +V+  + L+    R G
Sbjct: 321 MRSDGVALNRTTYLSILNACS-TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
              +A EL  +MP     S +  + G  R +   E
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGE 414


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 304/1001 (30%), Positives = 489/1001 (48%), Gaps = 126/1001 (12%)

Query: 35   SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
            +  L   +Q + F  S  +  + SIL    S ++L  GK  H++I+ +    D  + N+L
Sbjct: 167  AFQLFEEMQTAGFIPSKIT--YISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSL 224

Query: 95   MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
            + MY +C  L  AR++F  +  RD++S+N++L  YA         V E   LF  +    
Sbjct: 225  LNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAY-----VEECIGLFGQMSSEG 279

Query: 155  TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                ++T   LL    +   +   + +H  A+  GL  D  V  AL  ++ + G +  AK
Sbjct: 280  IPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAK 339

Query: 215  FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV----- 269
               +   +RDVV++  ++ A A++G  EE F  +  +   G+  +  +   VL       
Sbjct: 340  QALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSK 399

Query: 270  -----------ISDLGKRHEEQVQAYAIKLL-----------LYNN--NSNVVLWNKKLS 305
                       IS++G   + Q+    I +            L+N     +++ WN  ++
Sbjct: 400  ALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIA 459

Query: 306  GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            GY +  D   A++ +  M    V+   VTFL  L+A   +   + G+ IH   L+SG  S
Sbjct: 460  GYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKS 519

Query: 366  AVIVGNSLINMYSKMGCVC----------------------------------------- 384
               + N+L+NMY + G +                                          
Sbjct: 520  NGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMK 579

Query: 385  --GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
              GL  D+ T ASVL    + PE L L +QIH+  I++    D  +  ALI++Y R GS+
Sbjct: 580  KEGLEPDKITFASVLVGCKN-PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSL 638

Query: 443  AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             +A  +F +    ++ +W AMI G+       KA ELF  M   G +  + T ++ +KAC
Sbjct: 639  QDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKAC 698

Query: 503  GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
                 L +GK++ A+ + SG+ELD  V + ++  Y K G+M DA+ +F+ +P  D ++W 
Sbjct: 699  MSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWN 758

Query: 563  TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
             MI+G   NG    AL   +QM+  GVV ++F+F  ++ A S  +ALE+G+++HA ++K 
Sbjct: 759  KMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKR 818

Query: 623  DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
                D  VG +L+ MYAKCG++E+A  +F     +N V WNAM+   AQHG   + L  F
Sbjct: 819  KMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFF 878

Query: 683  EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
              M   G++PD  TF  +LSAC+++GLV E    F  +  ++G+ P +EHY  LV  LGR
Sbjct: 879  NCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGR 938

Query: 743  AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
            AGR +EA  LI  MPF   A++   LLGACR+ G+    +  A   + L   + + YVLL
Sbjct: 939  AGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLL 998

Query: 803  SNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADL-------IFAKV 839
            SN++AAA +WDDV   R  M+ + ++K+P                AD        I+ ++
Sbjct: 999  SNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEEL 1058

Query: 840  EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
            + L   ++  GY PDT +VL ++++E +E +L  HSE+LA AYGL+ TPP + I      
Sbjct: 1059 KRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNL 1118

Query: 894  ---------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                           L  +E +   +NRFH  ++G C C D
Sbjct: 1119 RICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCED 1159



 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 210/775 (27%), Positives = 373/775 (48%), Gaps = 77/775 (9%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           + ++ + +  ++++      L   K  HA+++ +   PD FL+N L+ MY +C S+  A 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           ++F KMP RD+ISWNS+++ YA  G        + F+LF  ++ +    S++T   +L  
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKK-----KAFQLFEEMQTAGFIPSKITYISILTA 192

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C S   +   + +H   ++ G   D  V  +L+N+Y K   +  A+ +F G+  RDVV +
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSY 252

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-HEEQVQ 282
             ML  YA+  + EE   LF  +   G+ PD  +   +L   +     D GKR H+  V 
Sbjct: 253 NTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVN 312

Query: 283 -----------------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                  A A + L    + +VV++N  ++   Q G    A E 
Sbjct: 313 EGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQ 372

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           +  M    V  +  T+L  L A + +  L  G+ IH    + G  S V +GNSLI+MY++
Sbjct: 373 YYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYAR 432

Query: 380 MG----------------------CVCGL-----RTDQFTLASVLRASSSLPEG---LHL 409
            G                       + G      R +   L   +++    P     LHL
Sbjct: 433 CGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHL 492

Query: 410 ------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                        K IH   +++   ++  ++ AL+++Y R GS+ EA+ +FE     D+
Sbjct: 493 LSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDI 552

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN+MI G+    +   A +LF  M   G   D+IT A+ +  C     L+ G+Q+H  
Sbjct: 553 ISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML 612

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
            ++SG +LD+ + + +++MY++CG++ DA  +F+ +   + ++WT MI G  D GE+  A
Sbjct: 613 IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKA 672

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
             ++ QM+  G  P + TF+ ++KA      L++G+++ A+++      D  VG +L+  
Sbjct: 673 FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISA 732

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+K G++ DA  +F +M  R+ + WN M+ G AQ+G G   L+    M+  GV  +  +F
Sbjct: 733 YSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSF 792

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           + +L+ACS    + E  +  H    K  ++ +V   + L+    + G  +EA E+
Sbjct: 793 VSILNACSSFSALEEG-KRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEV 846



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 193/373 (51%), Gaps = 1/373 (0%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K+IH   ++     D F+S  LI++Y +  S+++A  +F      D+ +WN++I  Y  
Sbjct: 101 AKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQ 160

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                KA +LF  M T+G    +IT  + + AC     L+ GK++H+  +++G++ D  V
Sbjct: 161 QGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRV 220

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +L+MY KC  +  A+ +F+ I   D V++ TM+         +  + ++ QM   G+
Sbjct: 221 QNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGI 280

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            PD+ T+  L+ A +  + L++G++IH   +    +SD  VG +L  M+ +CG++  A  
Sbjct: 281 PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQ 340

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
             +    R+ V++NA++  LAQHG+ EE  + +  M++ GV  +  T++ VL+ACS +  
Sbjct: 341 ALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKA 400

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           +  A E  H    + G   +V+  + L+    R G    A EL  +MP     S +  + 
Sbjct: 401 LG-AGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIA 459

Query: 770 GACRVQGDTETGK 782
           G  R +   E  K
Sbjct: 460 GYARREDRGEAMK 472


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 309/995 (31%), Positives = 485/995 (48%), Gaps = 133/995 (13%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           H    ++   +  +L   +++  L+  K  H +IL      +  L N L+ +Y   G L 
Sbjct: 3   HRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLD 62

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
              ++F+ MP+R + SW+ I++ +      N         LF  + E     + ++ A +
Sbjct: 63  GVVKVFEDMPNRSVRSWDKIISGFMEKKMSN-----RVLDLFSCMIEENVSPTEISFASV 117

Query: 166 LKLCLSSGY---VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           L+ C  SG+   +  +E +H   +  GL+    +S  L+ +Y+K G I  A+ +FD +  
Sbjct: 118 LRAC--SGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCT 175

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRH 277
           +D V W  M+  +++NG+ EE  HLF ++H +G+ P       VL   +     D+G++ 
Sbjct: 176 KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235

Query: 278 EEQVQAYAIKLLLYNNNSNVVLW------------------------NKKLSGYLQVGDN 313
              V  Y   L  Y  N+ V L+                        N  +SG  Q G +
Sbjct: 236 HALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFS 295

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            GA+E F  M R  ++ D VT    L+A A    L  G+Q+H   +K+G  S +IV  +L
Sbjct: 296 DGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGAL 355

Query: 374 INMYSKMGC---------------------------------------------VCGLRT 388
           +++Y  + C                                             + GL  
Sbjct: 356 LDLY--VNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIP 413

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +QFT  S+LR  +S+   L L +QIH   IK     + +V + LID+Y ++G +  A  +
Sbjct: 414 NQFTYPSILRTCTSVG-ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
                  D+ +W A+I GY   N   +AL+ F  M   G + D I  ++A+ AC  +  L
Sbjct: 473 LRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQAL 532

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            QG+Q+HA +  SG+  DL + + ++ +Y +CG + +A   F  I A D ++W  +ISG 
Sbjct: 533 NQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGF 592

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G  + AL ++ QM  + +    FTF   V A++ +  ++QG+QIHA +IK    SD 
Sbjct: 593 AQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDI 652

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L+  YAKCG+IEDA   F +M  +N V WNAM+ G +QHG G E + LFE MK  
Sbjct: 653 EVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQV 712

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G  P+ VTF+GVLSACS+ GLV++    F  M +++G+ P+  HY+ +VD + RAG    
Sbjct: 713 GEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSR 772

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I  MP E  A++ R LL AC V  + E G++ A+ L+ LEP DS+ YVLLSN++A 
Sbjct: 773 ARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAV 832

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
           + +WD     R  M+ + VKK+P                       AD I+  +  L K+
Sbjct: 833 SGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKK 892

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS---TPPSSVI--------- 893
             E GY  D   +L DVE+E+K+  +Y HSEKLA  +GL+S   T P  V+         
Sbjct: 893 AAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDC 952

Query: 894 ---------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                    +SN+  +   A RFHH   G+C C D
Sbjct: 953 HSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKD 987



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 7/200 (3%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F Q +     +S   + S +  A + +++  GK  HA I+      D  ++N L+T
Sbjct: 601 ALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALIT 660

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
            Y++CGS+  ARR F +MP+++ +SWN+++  Y+  G GN     E   LF  +++    
Sbjct: 661 FYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGN-----EAVNLFEKMKQVGEM 715

Query: 157 TSRLTLAPLLKLCLSSGYVWAS-ETVHGYALKIGLVWDEFVSGALVNIYSKFGKI-REAK 214
            + +T   +L  C   G V          + + GLV        +V++ S+ G + R  K
Sbjct: 716 PNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARK 775

Query: 215 FLFDGMQERDVVLWKVMLRA 234
           F+ +   E D  +W+ +L A
Sbjct: 776 FIEEMPIEPDATIWRTLLSA 795


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 286/920 (31%), Positives = 455/920 (49%), Gaps = 127/920 (13%)

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +D    N++L   + +G+ N     E  ++   +  S     R T + LL+LC+    + 
Sbjct: 73  KDTQKANAVLNRLSKAGQFN-----EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG 127

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             E ++ +  K G+  D F+   L+N+Y+K G    AK +FD M+E+DV  W ++L  Y 
Sbjct: 128 DGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL------- 289
           ++G  EE F L   + +  + PD  +   +L   +D  +  ++  + Y + L        
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD-ARNVDKGRELYNLILKAGWDTDL 246

Query: 290 ---------------------LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                +++N    ++V W   ++G  + G    A   F  M   
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--- 383
            VQ D V F+  L A    + L  G+++H    + G+ + + VG ++++MY+K G +   
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDA 366

Query: 384 ----------------------------------------CGLRTDQFTLASVLRASSSL 403
                                                    G+  ++ T  S+L A SS 
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS- 425

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           P  L   +QI  H I+    +D  V TAL+ +Y + GS+ +A  +FE     ++  WNAM
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I  Y+       AL  F  +   G + +  T  + +  C     L+ GK +H   MK+G 
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E DL VS+ ++ M+V CG ++ A+++FND+P  D V+W T+I+G V +G+  +A   +  
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKM 605

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M+ SG+ PD+ TF  L+ A +   AL +GR++HA + +     D  VG  L+ MY KCG+
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           IEDA+ +F ++  +N   W +M+ G AQHG G+E L+LF  M+  GV+PD +TF+G LSA
Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           C++ GL+ E   +F  M+E + IEP +EHY  +VD  GRAG   EA E I+ M  E  + 
Sbjct: 726 CAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSR 784

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +  ALLGAC+V  + E  +  A+K + L+P D+  +V+LSNI+AAA  W +V   R  M 
Sbjct: 785 VWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVML 844

Query: 824 RKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
            + V K P                        + I A++E L   +++ GYVPDT +VL 
Sbjct: 845 DRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLH 904

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------------- 898
           DVE+ EKE+AL+YHSE+LA  YGL+ TPP + I+ +K                       
Sbjct: 905 DVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQI 964

Query: 899 -PLYANRFHHLRDGMCPCAD 917
               +NRFHH +DG+C C D
Sbjct: 965 IARDSNRFHHFKDGVCSCGD 984



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 18/250 (7%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILRHAISTSDL 69
           F K + +N+ +++  +  ++Q   + ++              +SS + SIL    S+  L
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            LGK  H  I+ +    D  ++N L++M+  CG L+ A+ LF+ MP RDL+SWN+I+A +
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G+         F  F+ ++ES     ++T   LL  C S   +     +H    +  
Sbjct: 591 VQHGKNQV-----AFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D  V   L+++Y+K G I +A  +F  + +++V  W  M+  YA++G G+E   LF 
Sbjct: 646 FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFY 705

Query: 250 DLHRSGLCPD 259
            + + G+ PD
Sbjct: 706 QMQQEGVKPD 715



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 34/317 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SIL    S S L  G+     I+ +    D  +   L++MY++CGSL  A R+F+K+ 
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +++++WN+++ AY    +   +N    F+    L+E I   S  T   +L +C SS  +
Sbjct: 476 KQNVVAWNAMITAYVQHEQ--YDNALATFQAL--LKEGIKPNSS-TFTSILNVCKSSDSL 530

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH   +K GL  D  VS ALV+++   G +  AK LF+ M +RD+V W  ++  +
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIK--- 287
            ++G  +  F  F  +  SG+ PD  +   +L   +       G+R    +   A     
Sbjct: 591 VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDV 650

Query: 288 ------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 + +Y                   NV  W   ++GY Q G    A+E F  M + 
Sbjct: 651 LVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQE 710

Query: 327 NVQYDSVTFLVALAAVA 343
            V+ D +TF+ AL+A A
Sbjct: 711 GVKPDWITFVGALSACA 727


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 286/920 (31%), Positives = 455/920 (49%), Gaps = 127/920 (13%)

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +D    N++L   + +G+ N     E  ++   +  S     R T + LL+LC+    + 
Sbjct: 73  KDTQKANAVLNRLSKAGQFN-----EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG 127

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             E ++ +  K G+  D F+   L+N+Y+K G    AK +FD M+E+DV  W ++L  Y 
Sbjct: 128 DGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL------- 289
           ++G  EE F L   + +  + PD  +   +L   +D  +  ++  + Y + L        
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD-ARNVDKGRELYNLILKAGWDTDL 246

Query: 290 ---------------------LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                +++N    ++V W   ++G  + G    A   F  M   
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--- 383
            VQ D V F+  L A    + L  G+++H    + G+ + + VG ++++MY+K G +   
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDA 366

Query: 384 ----------------------------------------CGLRTDQFTLASVLRASSSL 403
                                                    G+  ++ T  S+L A SS 
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS- 425

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           P  L   +QI  H I+    +D  V TAL+ +Y + GS+ +A  +FE     ++  WNAM
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I  Y+       AL  F  +   G + +  T  + +  C     L+ GK +H   MK+G 
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E DL VS+ ++ M+V CG ++ A+++FND+P  D V+W T+I+G V +G+  +A   +  
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKM 605

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M+ SG+ PD+ TF  L+ A +   AL +GR++HA + +     D  VG  L+ MY KCG+
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           IEDA+ +F ++  +N   W +M+ G AQHG G+E L+LF  M+  GV+PD +TF+G LSA
Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           C++ GL+ E   +F  M+E + IEP +EHY  +VD  GRAG   EA E I+ M  E  + 
Sbjct: 726 CAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSR 784

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +  ALLGAC+V  + E  +  A+K + L+P D+  +V+LSNI+AAA  W +V   R  M 
Sbjct: 785 VWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVML 844

Query: 824 RKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
            + V K P                        + I A++E L   +++ GYVPDT +VL 
Sbjct: 845 DRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLH 904

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------------- 898
           DVE+ EKE+AL+YHSE+LA  YGL+ TPP + I+ +K                       
Sbjct: 905 DVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQI 964

Query: 899 -PLYANRFHHLRDGMCPCAD 917
               +NRFHH +DG+C C D
Sbjct: 965 IARDSNRFHHFKDGVCSCGD 984



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 18/250 (7%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILRHAISTSDL 69
           F K + +N+ +++  +  ++Q   + ++              +SS + SIL    S+  L
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            LGK  H  I+ +    D  ++N L++M+  CG L+ A+ LF+ MP RDL+SWN+I+A +
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G+         F  F+ ++ES     ++T   LL  C S   +     +H    +  
Sbjct: 591 VQHGKNQV-----AFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D  V   L+++Y+K G I +A  +F  + +++V  W  M+  YA++G G+E   LF 
Sbjct: 646 FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFY 705

Query: 250 DLHRSGLCPD 259
            + + G+ PD
Sbjct: 706 QMQQEGVKPD 715



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 34/317 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SIL    S S L  G+     I+ +    D  +   L++MY++CGSL  A R+F+K+ 
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +++++WN+++ AY    +   +N    F+    L+E I   S  T   +L +C SS  +
Sbjct: 476 KQNVVAWNAMITAYVQHEQ--YDNALATFQAL--LKEGIKPNSS-TFTSILNVCKSSDSL 530

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH   +K GL  D  VS ALV+++   G +  AK LF+ M +RD+V W  ++  +
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIK--- 287
            ++G  +  F  F  +  SG+ PD  +   +L   +       G+R    +   A     
Sbjct: 591 VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDV 650

Query: 288 ------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 + +Y                   NV  W   ++GY Q G    A+E F  M + 
Sbjct: 651 LVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQE 710

Query: 327 NVQYDSVTFLVALAAVA 343
            V+ D +TF+ AL+A A
Sbjct: 711 GVKPDWITFVGALSACA 727


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 292/892 (32%), Positives = 460/892 (51%), Gaps = 83/892 (9%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA+I++        + N L+ +YS+ G +  A+ +F+++  +D +SW ++++  + +
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  +     E   LF  + +S    +    + +L  C         E +HG+ +K GL  
Sbjct: 192 GRED-----EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           + FV  ALV +YS++G +  A+ +F  M  RD + +  ++   A+ GF +    LF  + 
Sbjct: 247 ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ 306

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
              + PD  +V  +L   + +G  ++ +Q+ +Y IK+ +   +S++++    L  Y++  
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGM---SSDLIIEGSLLDLYVKCF 363

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           D   A E F+     NV    V + V L A     NL+    I                 
Sbjct: 364 DIETAHEYFLTTETENV----VLWNVMLVAYGQLGNLSESYWI----------------- 402

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
             + M      + GL  +Q+T  S+LR  +SL   L L +QIH   IK+    + +V + 
Sbjct: 403 -FLQMQ-----IEGLMPNQYTYPSILRTCTSLG-ALDLGEQIHTQVIKSGFQFNVYVCSV 455

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LID+Y ++G +  A  + +     D+ +W AMI GY   +   +AL+LF  M   G R D
Sbjct: 456 LIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSD 515

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            I  ++A+ AC  +  L QG+Q+HA +  SG+  DL + + ++ +Y +CG   DA   F 
Sbjct: 516 NIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFE 575

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            I A D+++W  +ISG   +G  + AL ++ QM  +GV  + FTF   V A++    ++Q
Sbjct: 576 KIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQ 635

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA +IK    S+      L+ +Y+KCG+IEDA   F +M  +N V WNAM+ G +Q
Sbjct: 636 GKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQ 695

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G E + LFE+MK  G+ P+ VTF+GVLSACS+ GLV+E    F  M +++G+ P+ E
Sbjct: 696 HGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPE 755

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY  +VD LGRA     A E I  MP E  A + R LL AC V  + E G++ A  L+ L
Sbjct: 756 HYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLEL 815

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
           EP DS+ YVLLSN++A + +WD     R  MK + VKK+P                    
Sbjct: 816 EPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRL 875

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS-- 886
              A+ I+  ++ L +R  E GYV D   +L DVE+E+K+   Y HSEKLA A+GL+S  
Sbjct: 876 HPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLT 935

Query: 887 -TPPSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            T P  VI                  +SN+  +   A RFHH   G+C C D
Sbjct: 936 NTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKD 987



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 303/680 (44%), Gaps = 77/680 (11%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           L + C +SG +  ++ +H    K G   ++ +   L++IY   G++  A  LFD +   +
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK---RHEEQV 281
           V  W  ++          +V  LF  +    + PD+ +   VL   S  GK   +  EQ+
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSG-GKAPFQVTEQI 134

Query: 282 QAYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDN 313
            A  I              + LY+ N +V               V W   +SG  Q G  
Sbjct: 135 HAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRE 194

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             AI  F  M +S V      F   L+A    +   LG+Q+HG  +K G  S   V N+L
Sbjct: 195 DEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNAL 254

Query: 374 INMYSKMG----------------------CVCGL---------------------RTDQ 390
           + +YS+ G                       + GL                     + D 
Sbjct: 255 VTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T+AS+L A +S+  G +  KQ+H + IK    +D  +  +L+D+Y +   +  A   F 
Sbjct: 315 VTVASLLSACASVGAG-YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFL 373

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
             +  ++  WN M+  Y    N  ++  +F  M   G   ++ T  + ++ C  L  L  
Sbjct: 374 TTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDL 433

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+Q+H   +KSGF+ ++ V S ++DMY K G +  A+ I   +   D V+WT MI+G   
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +     AL ++ +M   G+  D   F+  + A + + AL QG+QIHA       S D  +
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +LV +YA+CG  +DAY+ F+++D ++ + WNA++ G AQ G+ EE L++F  M   GV
Sbjct: 554 GNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGV 613

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           E +  TF   +SA + T  + +  +  H M  K G + E E  + L+    + G  ++A 
Sbjct: 614 EANLFTFGSAVSATANTANIKQG-KQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAK 672

Query: 751 ELILSMPFEASASMHRALLG 770
                MP +   S +  + G
Sbjct: 673 REFFEMPEKNVVSWNAMITG 692



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/527 (22%), Positives = 217/527 (41%), Gaps = 93/527 (17%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H+ ++      D  +  +L+ +Y +C  +  A   F      +++ WN +L AY  
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     N++E + +F  ++      ++ T   +L+ C S G +   E +H   +K G  
Sbjct: 393 LG-----NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQ 447

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           ++ +V   L+++Y+K G++  A+ +   ++E DVV W  M+  Y ++    E   LF ++
Sbjct: 448 FNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEM 507

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQ-------VQAYAIKLLLYN------------ 292
              G+  D+      +   + +   ++ Q       +  Y+  L + N            
Sbjct: 508 ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRA 567

Query: 293 ----------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                     +  + + WN  +SG+ Q G    A++ F  M ++ V+ +  TF  A++A 
Sbjct: 568 QDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSAT 627

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           A T N+  G+QIH   +K+G+ S     N LI +YSK G +   + + F           
Sbjct: 628 ANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFF----------E 677

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           +PE             KN    +     A+I  Y ++G  +EA  LFE      L   N 
Sbjct: 678 MPE-------------KNVVSWN-----AMITGYSQHGYGSEAVSLFEEMKQLGLMP-NH 718

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           + F  +LS  SH  L            ++E            L   +   + H    K  
Sbjct: 719 VTFVGVLSACSHVGL------------VNE-----------GLSYFRSMSKEHGLVPKP- 754

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            E  +CV    +D+  +   +  A+    ++P  PD + W T++S C
Sbjct: 755 -EHYVCV----VDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSAC 796



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 161/377 (42%), Gaps = 41/377 (10%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  L + S S   FLQ        +   + SILR   S   L LG+  H +++ S    +
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            ++ + L+ MY++ G L  AR +  ++ + D++SW +++A Y        +   E  +LF
Sbjct: 450 VYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH-----DLFAEALKLF 504

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           + +      +  +  +  +  C     +   + +H  +   G   D  +  ALV++Y++ 
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARC 564

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G+ ++A   F+ +  +D + W  ++  +A++G  EE   +F  ++++G+  +  +    +
Sbjct: 565 GRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAV 624

Query: 268 GVISDLGK-RHEEQVQAYAIK-------------LLLYNN---------------NSNVV 298
              ++    +  +Q+ A  IK             + LY+                  NVV
Sbjct: 625 SATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVV 684

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG------- 351
            WN  ++GY Q G    A+  F  M +  +  + VTF+  L+A +    +N G       
Sbjct: 685 SWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSM 744

Query: 352 QQIHGTTLKSGFYSAVI 368
            + HG   K   Y  V+
Sbjct: 745 SKEHGLVPKPEHYVCVV 761


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 295/892 (33%), Positives = 453/892 (50%), Gaps = 83/892 (9%)

Query: 73   KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
            +  HAR +        F+ N L+ +Y + G L  A+++FD +  RD +SW ++L+  + S
Sbjct: 190  EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQS 249

Query: 133  GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            G        E   LF  +  S  + +    + +L  C    +    E +HG  LK G   
Sbjct: 250  G-----CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL 304

Query: 193  DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
            + +V  ALV +YS+ G    A+ +F+ M +RD V +  ++   ++ G+ ++   LF  + 
Sbjct: 305  ETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC 364

Query: 253  RSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
               L PD  +V  +L   S +G     +Q  +YAIK  +   +S+++L    L  Y++  
Sbjct: 365  LDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGM---SSDIILEGALLDLYVKCS 421

Query: 312  DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
            D   A E F++    NV    V + V L A    DNLN   +I                 
Sbjct: 422  DIKTAHEFFLSTETENV----VLWNVMLVAYGLLDNLNESFKI----------------- 460

Query: 372  SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                 +++M  + G+  +QFT  S+LR  SSL   + L +QIH   +K     + +VS+ 
Sbjct: 461  -----FTQMQ-MEGIEPNQFTYPSILRTCSSL-RAVDLGEQIHTQVLKTGFQFNVYVSSV 513

Query: 432  LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
            LID+Y + G +  A  +F      D+ +W AMI GY       +AL LF  M   G   D
Sbjct: 514  LIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSD 573

Query: 492  EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             I  A+A+ AC  +  L QG+Q+HA A  SG+  DL V + ++ +Y +CG + DA   F+
Sbjct: 574  NIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFD 633

Query: 552  DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
             I + D+++W ++ISG   +G  + ALS++ QM  +G   + FTF   V A++ +  ++ 
Sbjct: 634  KIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKL 693

Query: 612  GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
            G+QIHA +IK    S+  V   L+ +YAKCGNI+DA   F +M  +N + WNAML G +Q
Sbjct: 694  GKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQ 753

Query: 672  HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
            HG+G + L LFEDMK  GV P+ VTF+GVLSACS+ GLV E  + F  MRE +G+ P+ E
Sbjct: 754  HGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPE 813

Query: 732  HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
            HY+ +VD LGR+G    A   +  MP +  A + R LL AC V  + + G++ A  L+ L
Sbjct: 814  HYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLEL 873

Query: 792  EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
            EP DS+ YVLLSN++A   +W      R  MK + VKK+P                    
Sbjct: 874  EPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQK 933

Query: 833  ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                D I+  +  L +   E GY+P T+ +L D E  +K      HSEKLA A+GL+S  
Sbjct: 934  HPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLS 993

Query: 889  PSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
             S+ I                     +S++  +  +  RFHH + G+C C D
Sbjct: 994  SSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKD 1045



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 196/716 (27%), Positives = 315/716 (43%), Gaps = 78/716 (10%)

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           +YA+S   N E    G      + E     +  T   LL  CLSSG+      +HG  LK
Sbjct: 40  SYAYS---NDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G   +  +   L+++Y  FG +  A  +FD M  R +  W  +L  +        V  L
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156

Query: 248 FVDLHRSGLCPDDESVQCVLGVI--SDLGKRHEEQVQAYAIK-------------LLLYN 292
           F  + +  + PD+ +   VL      D+     E++ A  I              + LY 
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYF 216

Query: 293 NNS---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
            N                + V W   LSG  Q G    A+  F  M  S V      F  
Sbjct: 217 KNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSS 276

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------------- 381
            L+A    +   +G+Q+HG  LK GF     V N+L+ +YS++G                
Sbjct: 277 VLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD 336

Query: 382 ---------------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                      C+  L+ D  T+AS+L A SS+   L + KQ H
Sbjct: 337 EVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG-ALLVGKQFH 395

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            +AIK    +D  +  AL+D+Y +   +  A   F + +  ++  WN M+  Y L +N +
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN 455

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           ++ ++F+ M   G   ++ T  + ++ C  L  +  G+Q+H   +K+GF+ ++ VSS ++
Sbjct: 456 ESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLI 515

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY K G +  A  IF  +   D V+WT MI+G   + +   AL+++ +M+  G+  D  
Sbjct: 516 DMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNI 575

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            FA  + A + + AL QG+QIHA       S D  VG +LV +YA+CG + DAY  F ++
Sbjct: 576 GFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI 635

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             ++ + WN+++ G AQ G+ EE L LF  M   G E +S TF G   + +      +  
Sbjct: 636 FSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTF-GPAVSAAANVANVKLG 694

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           +  H M  K G + E E  + L+    + G   +A      MP +   S +  L G
Sbjct: 695 KQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTG 750



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 157/347 (45%), Gaps = 41/347 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SILR   S   + LG+  H ++L +    + ++++ L+ MY++ G L +A ++F ++ ++
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEK 537

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW +++A YA       E   E   LF+ +++    +  +  A  +  C     +  
Sbjct: 538 DVVSWTAMIAGYAQH-----EKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQ 592

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  A   G   D  V  ALV++Y++ GK+R+A F FD +  +D + W  ++  +A+
Sbjct: 593 GQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQ 652

Query: 238 NGFGEEVFHLFVDLHRSG-----LCPDDESVQCVLGVISDLGKR---------HEEQVQA 283
           +G  EE   LF  + ++G                      LGK+         H+ + + 
Sbjct: 653 SGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEV 712

Query: 284 YAIKLLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
             + + LY    N+               + WN  L+GY Q G    A+  F +M +  V
Sbjct: 713 SNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGV 772

Query: 329 QYDSVTFLVALAAVAGTDNLNLG-------QQIHGTTLKSGFYSAVI 368
             + VTF+  L+A +    ++ G       +++HG   K   Y+ V+
Sbjct: 773 LPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVV 819


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 295/1019 (28%), Positives = 491/1019 (48%), Gaps = 167/1019 (16%)

Query: 58   SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG---SLVYARRLFDKM 114
            S+++  I ++    GKS H +++++   PD +L   ++ +Y+R G    L YAR+LF++M
Sbjct: 76   SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135

Query: 115  PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
            P+R+L +WN+++ AYA       ++  E  RL+  +R S  F+ + T   ++K C++   
Sbjct: 136  PERNLTAWNTMILAYAR-----VDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMED 190

Query: 175  VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            +     +    +K GL  + FV GALV+ Y++FG + +A    D ++   VV W  ++  
Sbjct: 191  MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAG 250

Query: 235  YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLL 289
            Y +    EE + +F  + + G+CPD+ +    L V       D GK+   ++ A   K  
Sbjct: 251  YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310

Query: 290  LYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
             +  N+                        N V WN  +S   Q G  + A+  F+ M  
Sbjct: 311  TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 370

Query: 326  SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
            S  + +       L A AG  ++  G+++HG  +++   S +I+G++L++MYSK G V  
Sbjct: 371  SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEE 430

Query: 384  ------------------------------------------CGLRTDQFTLASVLRASS 401
                                                       G++ DQFT  ++L   +
Sbjct: 431  AHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490

Query: 402  SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            +     +  +QIH H I+ +   +  V T L+ +Y   G +  A+ +F      +  +WN
Sbjct: 491  N-QRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWN 549

Query: 462  AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
            +MI GY  +  + +AL LF  M  +G + D  ++++ + +C  L   ++G+++H + +++
Sbjct: 550  SMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609

Query: 522  GFELDLCVSSGILDMYVKCGAM-------------------------------VDAQSIF 550
              E +  +   ++DMY KCG+M                                DA+++F
Sbjct: 610  TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLF 669

Query: 551  NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
            + +   +   W ++++G  + G +  + + + +M  S +  D  T   +V   S L ALE
Sbjct: 670  DQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALE 729

Query: 611  QGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
             G Q+H+ +IK   ++CS    +  +LVDMY+KCG I  A  +F  M+ +N V WNAM+ 
Sbjct: 730  HGDQLHSLIIKKGFVNCSV--VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMIS 787

Query: 668  GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
            G ++HG  +E L L+E+M   G+ P+ VTF+ +LSACS+TGLV E    F  M+E Y IE
Sbjct: 788  GYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 847

Query: 728  PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
             + EHY+ +VD LGRAGR ++A E +  MP E   S   ALLGACRV  D + G+  A++
Sbjct: 848  AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQR 907

Query: 788  LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
            L  L+P +   YV++SNI+AAA +W +V   R  MK K VKKDP                
Sbjct: 908  LFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHA 967

Query: 833  --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY---HSEKLARA 881
                    + I+  +  L  + K  GY+PDT F+L +V++ ++E    Y   HSE+LA +
Sbjct: 968  GSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALS 1027

Query: 882  YGLISTPPSSVILSNKE-----------------------PLYANRFHHLRDGMCPCAD 917
             GLIS P  S I   K                            NRFHH  +G C C D
Sbjct: 1028 LGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGD 1086



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 173/706 (24%), Positives = 322/706 (45%), Gaps = 112/706 (15%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE---AKFL 216
           L  + L++ C+ S      +++H   +  G   D ++   ++ +Y++ G + +   A+ L
Sbjct: 72  LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG---VISDL 273
           F+ M ER++  W  M+ AYA      EV  L+  +  SG   D  +   V+     + D+
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191

Query: 274 GKRHEEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLS 305
           G     Q+Q+  +K  L  N                             ++VV WN  ++
Sbjct: 192 GGV--RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY+++     A   F  M++  V  D+ TF  AL       + + G+Q+H   +  GF  
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKG 309

Query: 366 AVIVGNSLINMYSKM----GCV-------------------------------------- 383
              VGN+LI+MY+K      C+                                      
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 384 -CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             G ++++F L S+L AS+ L + +   +++H H ++N   +D  + +AL+D+Y + G +
Sbjct: 370 ESGYKSNRFNLGSILMASAGLAD-IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMV 428

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKA 501
            EA  +F +    +  ++NA++ GY+    + +ALEL+  M +  G + D+ T  T +  
Sbjct: 429 EEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTL 488

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C       QG+Q+HA+ +++    ++ V + ++ MY +CG +  A+ IFN +   +  +W
Sbjct: 489 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 548

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            +MI G   NGE   AL ++ QM+L+G+ PD F+ + ++ +   L+  ++GR++H  +++
Sbjct: 549 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR 608

Query: 622 LDCSSDPFVGISLVDMYAKCGNIE-------------------------------DAYIL 650
                +  + + LVDMYAKCG+++                               DA  L
Sbjct: 609 NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNL 668

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F QM+ RNT LWN++L G A  G  +E+   F +M    +E D +T + +++ CS    +
Sbjct: 669 FDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPAL 728

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
               +   L+ +K  +   V   + LVD   + G   +A  +  +M
Sbjct: 729 EHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM 774



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 128/609 (21%), Positives = 243/609 (39%), Gaps = 130/609 (21%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F+ +L+ FL+       S+     SIL  +   +D+  G+  H  ++ +    D  L + 
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MYS+CG +  A ++F  + +R+ +S+N++LA Y    EG AE   E +   +S  E 
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ--EGKAEEALELYHDMQS--ED 473

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                + T   LL LC +         +H + ++  +  +  V   LV++YS+ G++  A
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 533

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG---VI 270
           K +F+ M ER+   W  M+  Y +NG  +E   LF  +  +G+ PD  S+  +L     +
Sbjct: 534 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 593

Query: 271 SDLGK------------RHEEQV--------------QAYAIKLLLYNNNSNVVLWNKKL 304
           SD  K              EE +                YA K+       +V+L N  +
Sbjct: 594 SDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMV 653

Query: 305 SGYLQVGDNHGA-------------------------------IECFVNMIRSNVQYDSV 333
           S ++  G  + A                                  F+ M+ S+++YD +
Sbjct: 654 SAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 713

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSKMGCVCGLRTDQFT 392
           T +  +   +    L  G Q+H   +K GF + +V++  +L++MYSK G +   RT    
Sbjct: 714 TMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKART---- 769

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFEN 451
                                    + ++    + VS  A+I  Y ++G   EA  L+E 
Sbjct: 770 -------------------------VFDNMNGKNIVSWNAMISGYSKHGCSKEALILYE- 803

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
                                          M   G   +E+T    + AC    ++++G
Sbjct: 804 ------------------------------EMPKKGMYPNEVTFLAILSACSHTGLVEEG 833

Query: 512 KQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            ++   +M+  + ++      + ++D+  + G + DA+     +P  P+   W  ++  C
Sbjct: 834 LRIFT-SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892

Query: 569 VDNGEEDLA 577
             + + D+ 
Sbjct: 893 RVHKDMDMG 901



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           NG +    +  H    S V P    ++ L++      + ++G+ IH  +I    + D ++
Sbjct: 51  NGPDSPKPTSIHTKPASDVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYL 108

Query: 631 GISLVDMYAKCGNIED---AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
              ++ +YA+ G ++D   A  LF++M  RN   WN M++  A+  +  E L+L+  M+ 
Sbjct: 109 MTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRG 168

Query: 688 HGVEPDSVTFIGVLSAC 704
            G   D  TF  V+ AC
Sbjct: 169 SGNFSDKFTFPSVIKAC 185


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 310/1006 (30%), Positives = 495/1006 (49%), Gaps = 137/1006 (13%)

Query: 36   LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
            + L+ F+++    S+  +  W  +L   +++  L      H RI  S    +  L ++L+
Sbjct: 43   IQLMNFMEERGVRSNYQNYLW--LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 96   TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESI 154
              Y R G    A ++FD+  +R + SWN ++  +        ++  + F LFR  L E I
Sbjct: 101  DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ-----KSNFQVFCLFRRMLAEGI 155

Query: 155  TFTSRLTLAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
            T  +  T A +LK C+     +   + VH      G      V+  L+++YSK G I  A
Sbjct: 156  T-PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214

Query: 214  KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV---- 269
            K +F+ +  +D+V W  M+   ++NG  EE   LF D+H S + P    +  VL      
Sbjct: 215  KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274

Query: 270  -ISDLGKRHEEQVQAYAIK-------------LLLYN---------------NNSNVVLW 300
             + +LG    EQ+    IK             + LY+               N+ + V +
Sbjct: 275  QLFELG----EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSY 330

Query: 301  NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
            N  +SG +Q G +  A+E F  M R  ++ D +T    L+A A    L+ G Q+H   +K
Sbjct: 331  NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390

Query: 361  SGFYSAVIVGNSLINMYSKMGCVC------------------------------------ 384
            +G  + +I+  SL+++YSK   V                                     
Sbjct: 391  AGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEI 450

Query: 385  -------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                   G+  +QFT  S+LR  +SL   L+L +QIH H IK     + +V + LID+Y 
Sbjct: 451  FRQMQMEGMIPNQFTYPSILRTCTSLG-ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509

Query: 438  RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
            + G +A A  +       D+ +W AMI GY+  +   +AL+LF  M   G + D I  A+
Sbjct: 510  KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569

Query: 498  AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            A+ AC  +  L+QG+Q+HA +  +GF  DL +++ ++ +Y +CG + +A   F  I   +
Sbjct: 570  AISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629

Query: 558  DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            +++W +++SG   +G  + AL ++ +M  +    + FT+   + A++ L  ++QG+QIH+
Sbjct: 630  NISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS 689

Query: 618  NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             ++K    S+  V  SL+ +YAK G+I DA+  F  M  RN + WNAM+ G +QHG G E
Sbjct: 690  MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGME 749

Query: 678  TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
             L+LFE+MK  G+ P+ VTF+GVLSACS+ GLV E  + F  M + + + P+ EHY  +V
Sbjct: 750  ALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVV 809

Query: 738  DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
            D LGRAG+   A E I  MP  A A + R LL AC +  + E G+  A  L+ LEP DS+
Sbjct: 810  DLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSA 869

Query: 798  AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
             YVL+SNI+A + QW     +R  MK + VKK+P                        + 
Sbjct: 870  TYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQ 929

Query: 835  IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS---TPPSS 891
            I+  +  L +R  E GYV D+  +L + E+ +K+   + HSEKLA A+GL+S     P  
Sbjct: 930  IYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIR 989

Query: 892  VI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            V+                  +SN+  +   A+RFHH   G+C C D
Sbjct: 990  VMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKD 1035



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 6/285 (2%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           K ++L + M   G R +       ++ C     L +  ++H    KSGF+ +  +   ++
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           D Y + G    A  +F++       +W  MI   V          ++ +M   G+ P+ +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 595 TFAILVKASSCL---TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           TFA ++KA  C+    A    +Q+H+        S P V   L+D+Y+K G IE A  +F
Sbjct: 161 TFAGVLKA--CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF 218

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             + M++ V W AM+ GL+Q+G  EE + LF DM A  + P       VLSA +   L  
Sbjct: 219 NCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF- 277

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           E  E  H +  K+G   E    + LV    R+ +   A  +  +M
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM 322



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 159/377 (42%), Gaps = 41/377 (10%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  L + S S   F Q        +   + SILR   S   L LG+  H  ++ +    +
Sbjct: 438 YGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLN 497

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            ++ + L+ MY++ G L  A R+  ++P+ D++SW +++A Y        +  +E  +LF
Sbjct: 498 VYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH-----DMFSEALQLF 552

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +         +  A  +  C     +   + +H  +   G   D  ++ AL+++Y++ 
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARC 612

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS------------- 254
           G+I+EA   F+ + +++ + W  ++   A++G+ EE   +FV + R+             
Sbjct: 613 GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAI 672

Query: 255 ---GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL-----------YNNNS--NVV 298
                  + +  Q +  ++   G   E +V    I L             +N+ S  NV+
Sbjct: 673 SAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVI 732

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLG 351
            WN  ++GY Q G    A+  F  M    +  + VTF+  L+A +       G D     
Sbjct: 733 SWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792

Query: 352 QQIHGTTLKSGFYSAVI 368
            +IH    KS  Y  V+
Sbjct: 793 FKIHDLVPKSEHYVCVV 809


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 288/912 (31%), Positives = 461/912 (50%), Gaps = 87/912 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+      +L LG   HA+++ +      FL + L+ +Y + G +  ARR+FDKM +R
Sbjct: 94  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ SW +I+  Y   G G+ E   E  +LF  +              + K C        
Sbjct: 154 NVFSWTAIMEMYC--GLGDYE---ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + V+ Y L IG   +  V G++++++ K G++  A+  F+ ++ +DV +W +M+  Y  
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 268

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKL-LLYNNNSN 296
            G  ++      D+  SG+ PD  +   ++   +  G+   E+   Y +++  L +   N
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQF--EEASKYFLEMGGLKDFKPN 326

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VV W   ++G  Q G +  A+  F  M+   V+ +S+T   A++A      L  G++IHG
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 386

Query: 357 TTLK-SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             +K     S ++VGNSL++ Y+K                  R+         + KQ   
Sbjct: 387 YCIKVEELDSDLLVGNSLVDYYAK-----------------CRSVEVARRKFGMIKQ--- 426

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENK-DGF--DLATWNAMIFGYILSN 471
                    D     A++  Y   GS  EA E L E K  G   D+ TWN ++ G+    
Sbjct: 427 --------TDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG 478

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           +   ALE F  MH+ G   +  TI+ A+ ACG +  LK GK++H Y +++  EL   V S
Sbjct: 479 DGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS 538

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY  C ++  A S+F+++   D V W ++IS C  +G    AL +  +M LS V  
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  T    + A S L AL QG++IH  +I+    +  F+  SL+DMY +CG+I+ +  +F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             M  R+ V WN M+     HG G + + LF+  +  G++P+ +TF  +LSACS++GL+ 
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 718

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E ++ F +M+ +Y ++P VE Y+ +VD L RAG+  E  E I  MPFE +A++  +LLGA
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR+  + +  ++ A  L  LEP  S  YVL++NI++AA +W+D    R  MK + V K P
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 838

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                   + I AK+E L   IKE GYVPDT+FVL DV+E+EKE
Sbjct: 839 GCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKE 898

Query: 869 RALYYHSEKLARAYGLIST---PPSSVI------------------LSNKEPLYAN--RF 905
            +L  HSEK+A A+GLIST    P  +I                  +  ++ +  +  RF
Sbjct: 899 FSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRF 958

Query: 906 HHLRDGMCPCAD 917
           HH  DG+C C D
Sbjct: 959 HHFVDGVCSCGD 970



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 146/327 (44%), Gaps = 41/327 (12%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS+L+    L   L L  Q+H   + N      F+ + L++VYC+ G + +A  +F+   
Sbjct: 93  ASILQKCRKL-YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             ++ +W A++  Y    +  + ++LF  M   G R D        KAC  L   + GK 
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           ++ Y +  GFE + CV   ILDM++KCG M  A+  F +I   D   W  M+SG    GE
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              AL     M+LSGV PD+ T+  ++                                 
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISG------------------------------- 300

Query: 634 LVDMYAKCGNIEDAYILFKQM----DMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
               YA+ G  E+A   F +M    D + N V W A++ G  Q+G   E L +F  M   
Sbjct: 301 ----YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYE 715
           GV+P+S+T    +SAC+   L+    E
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGRE 383



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 135/265 (50%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A+ ++ C  L  L+ G Q+HA  + +G ++   + S +L++Y + G + DA+ +F+ +  
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            +  +WT ++      G+ +  + +++ M   GV PD F F  + KA S L     G+ +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           +  ++ +    +  V  S++DM+ KCG ++ A   F++++ ++  +WN M+ G    G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           ++ LK   DMK  GV+PD VT+  ++S  + +G   EA + F  M      +P V  ++ 
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 736 LVDALGRAGRTKEAGELILSMPFEA 760
           L+    + G   EA  +   M  E 
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEG 357



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 6/237 (2%)

Query: 39  LPFLQKSHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           L F Q+ H      ++   S  L       +L LGK  H  +L +       + + L++M
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           YS C SL  A  +F ++  RD++ WNSI++A A SG            L R +  S    
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS-----VNALDLLREMNLSNVEV 598

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           + +T+   L  C     +   + +H + ++ GL    F+  +L+++Y + G I++++ +F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           D M +RD+V W VM+  Y  +GFG +  +LF      GL P+  +   +L   S  G
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSG 715



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 591 PDEFT--FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           PDE    +A +++    L  L  G Q+HA L+        F+G  L+++Y + G +EDA 
Sbjct: 85  PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            +F +M  RN   W A++      G+ EET+KLF  M   GV PD   F  V  ACS
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS 201


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 275/878 (31%), Positives = 430/878 (48%), Gaps = 122/878 (13%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R T + LL+LC+    +   E +H +     +  D F+   L+++Y+K G    AK +FD
Sbjct: 104 RQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFD 163

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            M ++DV  W ++L  Y ++   EE F L   + + G+ PD  +   +L   +D  K  +
Sbjct: 164 EMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD-AKNVD 222

Query: 279 EQVQAYAI----------------------------KLLLYNN--NSNVVLWNKKLSGYL 308
           +  + +++                             L ++NN    +++ W   ++G  
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLA 282

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           +      A   F  M    VQ D V F+  L A    + L  G+++H    + G  + + 
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIY 342

Query: 369 VGNSLINMYSKMGCV-------------------------------------------CG 385
           VG +L++MY+K G +                                            G
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +  ++ T  S+L A S  P  L   +QIH   IK   + D  V TAL+ +Y + GS+ +A
Sbjct: 403 IEPNRVTFMSILGACSR-PSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA 461

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +FE     ++  WNAMI  Y+       A+  F  +   G + D  T  + +  C   
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+ GK + +  +++GFE DL + + ++ M+V CG ++ A ++FND+P  D V+W T+I
Sbjct: 522 DALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTII 581

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G V +GE   A   +  M+ SGV PD+ TF  L+ A +   AL +GR++HA + +    
Sbjct: 582 AGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALD 641

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D  VG  L+ MY KCG+I+DA+++F  +  +N   W +M+ G AQHG G+E L+LF  M
Sbjct: 642 CDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQM 701

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +  GV+PD +TF+G LSAC++ GL+ E   +F  M++ + IEP +EHY  +VD  GRAG 
Sbjct: 702 QQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGL 760

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA E I  M  +  + +  ALLGAC+V  D E  + VA+K + L+P D   YV+LSNI
Sbjct: 761 LHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNI 820

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +AAA  W +VT  R  M  + V K P                        + I A++  L
Sbjct: 821 YAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRL 880

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---- 898
              +K+ GYVPDT +VL DVE+ EKE AL +HSE+LA AYGL+ TPP + I+ +K     
Sbjct: 881 HMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVC 940

Query: 899 -------------------PLYANRFHHLRDGMCPCAD 917
                                 +NRFHH +DG+C C D
Sbjct: 941 GDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGD 978



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 5/207 (2%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           SS + SIL    S   L LGK   + I+ +    D  + N L++M+  CG L+ A  LF+
Sbjct: 508 SSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFN 567

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            MP+RDL+SWN+I+A +   GE         F  F+ ++ES     ++T   LL  C S 
Sbjct: 568 DMPERDLVSWNTIIAGFVQHGENQF-----AFDYFKMMQESGVKPDQITFTGLLNACASP 622

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +     +H    +  L  D  V   L+++Y+K G I +A  +F  + +++V  W  M+
Sbjct: 623 EALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMI 682

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPD 259
             YA++G G+E   LF  + + G+ PD
Sbjct: 683 TGYAQHGRGKEALELFCQMQQEGVKPD 709



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 147/317 (46%), Gaps = 34/317 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SIL      S L  G+  H RI+ +  I D  +   L++MY++CGSL+ AR +F+++ 
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS 469

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +++++WN+++ AY    +   +N    F+    L+E I   S  T   +L +C S   +
Sbjct: 470 KQNVVAWNAMITAYVQHEK--YDNAVATFQAL--LKEGIKPDSS-TFTSILNVCKSPDAL 524

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + V    ++ G   D  +  ALV+++   G +  A  LF+ M ERD+V W  ++  +
Sbjct: 525 ELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGF 584

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKL-- 288
            ++G  +  F  F  +  SG+ PD  +   +L   +       G+R    +   A+    
Sbjct: 585 VQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDV 644

Query: 289 --------------------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                               L+++N    NV  W   ++GY Q G    A+E F  M + 
Sbjct: 645 VVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQE 704

Query: 327 NVQYDSVTFLVALAAVA 343
            V+ D +TF+ AL+A A
Sbjct: 705 GVKPDWITFVGALSACA 721


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 310/1006 (30%), Positives = 494/1006 (49%), Gaps = 137/1006 (13%)

Query: 36   LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
            + L+ F+++    S+  +  W  +L   +++  L      H RI  S    +  L ++L+
Sbjct: 43   IQLMNFMEERGVRSNYQNYLW--LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 96   TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESI 154
              Y R G    A ++FD+  +R + SWN ++  +        ++  + F LFR  L E I
Sbjct: 101  DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ-----KSNFQVFCLFRRMLAEGI 155

Query: 155  TFTSRLTLAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
            T  +  T A +LK C+     +   + VH      G      V+  L+++YSK G I  A
Sbjct: 156  T-PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214

Query: 214  KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV---- 269
            K +F+ +  +D+V W  M+   ++NG  EE   LF D+H S + P    +  VL      
Sbjct: 215  KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274

Query: 270  -ISDLGKRHEEQVQAYAIK-------------LLLYN---------------NNSNVVLW 300
             + +LG    EQ+    IK             + LY+               N+ + V +
Sbjct: 275  QLFELG----EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSY 330

Query: 301  NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
            N  +SG +Q G +  A+E F  M R  ++ D +T    L+A A    L+ G Q+H   +K
Sbjct: 331  NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390

Query: 361  SGFYSAVIVGNSLINMYSKMGCVC------------------------------------ 384
            +G  + +I+  SL+++YSK   V                                     
Sbjct: 391  AGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEI 450

Query: 385  -------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                   G+  +QFT  S+LR  +SL   L+L +QIH H IK     + +V + LID+Y 
Sbjct: 451  FRQMQMEGMIPNQFTYPSILRTCTSLG-ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509

Query: 438  RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
            + G +A A  +       D+ +W AMI GY+  +   +AL+LF  M   G + D I  A+
Sbjct: 510  KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569

Query: 498  AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            A+ AC  +  L+QG+Q+HA +  +GF  DL +++ ++ +Y +CG + +A   F  I   +
Sbjct: 570  AISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629

Query: 558  DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            +++W +++SG   +G  + AL ++ +M  +    + FT+   + A++ L  ++QG+QIH+
Sbjct: 630  NISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS 689

Query: 618  NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             ++K    S+  V  SL+ +YAK G+I DA+  F  M  RN + WNAM+ G +QHG G E
Sbjct: 690  MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGME 749

Query: 678  TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
             L+LFE+MK  G+ P+ VTF+GVLSACS+ GLV E  + F  M + + + P+ EHY  +V
Sbjct: 750  ALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVV 809

Query: 738  DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
            D LGRAG+   A E I  MP  A A + R LL AC +  + E G+  A  L+ LEP DS+
Sbjct: 810  DLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSA 869

Query: 798  AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
             YVL+SNI+A + QW     +R  MK   VKK+P                        + 
Sbjct: 870  TYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQ 929

Query: 835  IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS---TPPSS 891
            I+  +  L +R  E GYV D+  +L + E+ +K+   + HSEKLA A+GL+S     P  
Sbjct: 930  IYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIR 989

Query: 892  VI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            V+                  +SN+  +   A+RFHH   G+C C D
Sbjct: 990  VMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKD 1035



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 6/285 (2%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           K ++L + M   G R +       ++ C     L +  ++H    KSGF+ +  +   ++
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           D Y + G    A  +F++       +W  MI   V          ++ +M   G+ P+ +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 595 TFAILVKASSCL---TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           TFA ++KA  C+    A    +Q+H+        S P V   L+D+Y+K G IE A  +F
Sbjct: 161 TFAGVLKA--CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF 218

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             + M++ V W AM+ GL+Q+G  EE + LF DM A  + P       VLSA +   L  
Sbjct: 219 NCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF- 277

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           E  E  H +  K+G   E    + LV    R+ +   A  +  +M
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM 322



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 159/377 (42%), Gaps = 41/377 (10%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  L + S S   F Q        +   + SILR   S   L LG+  H  ++ +    +
Sbjct: 438 YGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLN 497

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            ++ + L+ MY++ G L  A R+  ++P+ D++SW +++A Y        +  +E  +LF
Sbjct: 498 VYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH-----DMFSEALQLF 552

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +         +  A  +  C     +   + +H  +   G   D  ++ AL+++Y++ 
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARC 612

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS------------- 254
           G+I+EA   F+ + +++ + W  ++   A++G+ EE   +FV + R+             
Sbjct: 613 GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAI 672

Query: 255 ---GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL-----------YNNNS--NVV 298
                  + +  Q +  ++   G   E +V    I L             +N+ S  NV+
Sbjct: 673 SAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVI 732

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLG 351
            WN  ++GY Q G    A+  F  M    +  + VTF+  L+A +       G D     
Sbjct: 733 SWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792

Query: 352 QQIHGTTLKSGFYSAVI 368
            +IH    KS  Y  V+
Sbjct: 793 FKIHDLVPKSEHYVCVV 809


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 289/895 (32%), Positives = 447/895 (49%), Gaps = 120/895 (13%)

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           +  +++  +R      + +T   +LK C S   +   + +H + ++ G   D  V  ALV
Sbjct: 13  DAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALV 72

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           N+Y K G I +A+ +FD M ER+V+ W VM+   A  G G+E FH F+ + R G  P+  
Sbjct: 73  NMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSY 132

Query: 262 SVQCVL------GVISDLGKRHEEQVQA-YAIKLLLYN------------NNSNVVL--- 299
           +   +L      G +  + + H   V A  A+ L + N            +++ VV    
Sbjct: 133 TYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM 192

Query: 300 -------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL--AAVAGTDNLNL 350
                  W   + G  Q G    A   F+ M R     +  T+L  L  +A+  T  L  
Sbjct: 193 VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEW 252

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------C---------------- 384
            +++H    K+GF S + VGN+LI+MY+K G +          C                
Sbjct: 253 VKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQ 312

Query: 385 -GLRTDQFTLASVLRASSSLPE--------GLHLS-------KQIHVHAIKNDTVADSFV 428
            G   + FT+   ++    +P+          H+S       K++H HA++   V+D  V
Sbjct: 313 NGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRV 372

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            +A + +Y R GS+ +A+ +F+     ++ TWNAMI G        +AL LF  M   G 
Sbjct: 373 GSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGF 432

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D  T    + A      L+  K++H+YA+ +G  +DL V + ++ MY KCG  + A+ 
Sbjct: 433 FPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQ 491

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+D+   +   WT MISG   +G    A S++ QM   G+VPD  T+  ++ A +   A
Sbjct: 492 VFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGA 551

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE  +++H++ +     SD  VG +LV MYAKCG+++DA  +F  M  R+   W  M+ G
Sbjct: 552 LEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGG 611

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
           LAQHG G + L LF  MK  G +P+  +F+ VLSACS+ GLV E    F  + + YGIEP
Sbjct: 612 LAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEP 671

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            +EHY+ +VD LGRAG+ +EA   IL+MP E   +   ALLGAC   G+ E  ++ A++ 
Sbjct: 672 TMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKER 731

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------- 831
           + L+P  +S YVLLSNI+AA   W+     R  M+R+ ++K+P                 
Sbjct: 732 LKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVG 791

Query: 832 ------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                 +  I+AK++ LIKR+K  GYVPDT  VL + ++E KE+AL  HSEKLA  YGL+
Sbjct: 792 DTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLM 851

Query: 886 STPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            TP  + I                     ++ +E +   A RFHH +DG+C C D
Sbjct: 852 HTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGD 906



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 191/698 (27%), Positives = 318/698 (45%), Gaps = 85/698 (12%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SIL+   S   L  GK  HA I+ S    D  +   L+ MY +CGS+  A+ +FDKM 
Sbjct: 33  YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMV 92

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +R++ISW  ++   AH G G      E F  F  ++      +  T   +L    S+G +
Sbjct: 93  ERNVISWTVMIGGLAHYGRGQ-----EAFHRFLQMQREGFIPNSYTYVSILNANASAGAL 147

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH +A+  GL  D  V  ALV++Y+K G I +A+ +FDGM ERD+  W VM+   
Sbjct: 148 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGL 207

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVL--------GVISDLGKRHEEQVQAYAIK 287
           A++G G+E F LF+ + R G  P+  +   +L        G +  + + H+   +A  I 
Sbjct: 208 AQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267

Query: 288 LLLYNN-----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            L   N                       + +V+ WN  + G  Q G  H A   F+ M 
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQ 327

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           +     DS T+L  L     T      +++H   ++ G  S + VG++ ++MY + G + 
Sbjct: 328 QEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSID 387

Query: 384 ----------------------------CG---------LRTDQF-----TLASVLRASS 401
                                       CG         +R + F     T  ++L A+ 
Sbjct: 388 DAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANV 447

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
              E L   K++H +AI    V D  V  AL+ +Y + G+   A+ +F++    ++ TW 
Sbjct: 448 G-EEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWT 505

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
            MI G       H+A  LF  M   G   D  T  + + AC     L+  K++H++A+ +
Sbjct: 506 VMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNA 565

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           G   DL V + ++ MY KCG++ DA+ +F+D+   D  +WT MI G   +G    AL ++
Sbjct: 566 GLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLF 625

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYA 639
            +M+L G  P+ ++F  ++ A S    +++GR+   +L + D   +P +     +VD+  
Sbjct: 626 VKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQ-DYGIEPTMEHYTCMVDLLG 684

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           + G +E+A      M +      W A+L     +GN E
Sbjct: 685 RAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLE 722



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 178/658 (27%), Positives = 282/658 (42%), Gaps = 107/658 (16%)

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIK-- 287
           M+  YAE G+ E+   ++  + R G  P++ +   +L    S +  +  +++ A+ I+  
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 288 ------------------------LLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFV 321
                                    L+++     NV+ W   + G    G    A   F+
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M R     +S T++  L A A    L   +++H   + +G    + VGN+L++MY+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 382 CVCGLRT--------DQF-----------------------------------TLASVLR 398
            +   R         D F                                   T  S+L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 399 ASSSLPEG-LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           AS+    G L   K++H HA K   ++D  V  ALI +Y + GS+ +A  +F+     D+
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WNAMI G   +   H+A  +F  M   G   D  T  + +         +  K++H +
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           A++ G   DL V S  + MY++CG++ DAQ IF+ +   +   W  MI G         A
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           LS++ QMR  G  PD  TF  ++ A+    ALE  +++H+  I      D  VG +LV M
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHM 479

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           YAKCGN   A  +F  M  RN   W  M+ GLAQHG G E   LF  M   G+ PD+ T+
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539

Query: 698 IGVLSACSYT----------------GLVSEAYENFHL--MREKYG------------IE 727
           + +LSAC+ T                GLVS+      L  M  K G            +E
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMP---FEASASMHRALLGACRVQGDTETGK 782
            +V  ++ ++  L + GR  +A +L + M    F+ +     A+L AC   G  + G+
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGR 657



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 154/614 (25%), Positives = 262/614 (42%), Gaps = 85/614 (13%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FLQ        +S  + SIL    S   L   K  H+  +N+    D  + N L+ MY++
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES---ITFT 157
            GS+  AR +FD M +RD+ SW  ++   A  G G      E F LF  +         T
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQ-----EAFSLFLQMERGGCLPNLT 233

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           + L++     +  +    W  E VH +A K G + D  V  AL+++Y+K G I +A+ +F
Sbjct: 234 TYLSILNASAITSTGALEWVKE-VHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV-ISDLGKR 276
           DGM +RDV+ W  M+   A+NG G E F +F+ + + G  PD  +   +L   +S     
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352

Query: 277 HEEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYL 308
             ++V  +A+++ L ++                              NV  WN  + G  
Sbjct: 353 WVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVA 412

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q      A+  F+ M R     D+ TF+  L+A  G + L   +++H   + +G    + 
Sbjct: 413 QQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVD-LR 471

Query: 369 VGNSLINMYSKMGCVC-------------------------------------------G 385
           VGN+L++MY+K G                                              G
Sbjct: 472 VGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREG 531

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +  D  T  S+L A +S    L   K++H HA+    V+D  V  AL+ +Y + GS+ +A
Sbjct: 532 IVPDATTYVSILSACAS-TGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDA 590

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F++    D+ +W  MI G         AL+LF  M   G + +  +    + AC   
Sbjct: 591 RRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHA 650

Query: 506 LMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
            ++ +G +Q  +     G E  +   + ++D+  + G + +A+    ++P  P D  W  
Sbjct: 651 GLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGA 710

Query: 564 MISGCVDNGEEDLA 577
           ++  CV  G  ++A
Sbjct: 711 LLGACVTYGNLEMA 724



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 187/356 (52%), Gaps = 5/356 (1%)

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY     +  A++++S M   G + +EIT  + +KAC   + LK GK++HA+ ++SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F+ D+ V + +++MYVKCG++ DAQ IF+ +   + ++WT MI G    G    A   + 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           QM+  G +P+ +T+  ++ A++   ALE  +++H++ +    + D  VG +LV MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           +I+DA ++F  M  R+   W  M+ GLAQHG G+E   LF  M+  G  P+  T++ +L+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 703 ACSYTGLVS-EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           A + T   + E  +  H    K G   ++   + L+    + G   +A  L+     +  
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDA-RLVFDGMCDRD 299

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPF--DSSAYVLLSNIFAAANQWDDV 815
                A++G     G       +  K M  E F  DS+ Y+ L N   +   W+ V
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLK-MQQEGFVPDSTTYLSLLNTHVSTGAWEWV 354



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 187/388 (48%), Gaps = 45/388 (11%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHA--ISTSDLLLGKSTHARILNSSQIP 86
           R   +FSL    FLQ        + + + SIL  +   ST  L   K  H     +  I 
Sbjct: 212 RGQEAFSL----FLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D  + N L+ MY++CGS+  AR +FD M DRD+ISWN+++   A +G G+     E F +
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGH-----EAFTI 322

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSG-YVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           F  +++        T   LL   +S+G + W  E VH +A+++GLV D  V  A V++Y 
Sbjct: 323 FLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE-VHKHAVEVGLVSDLRVGSAFVHMYI 381

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           + G I +A+ +FD +  R+V  W  M+   A+   G E   LF+ + R G  PD  +   
Sbjct: 382 RCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVN 441

Query: 266 VLGVISDLGKRHEE---QVQAYAIKLLLYN--------------NNS------------- 295
           +L   +++G+   E   +V +YAI   L +               N+             
Sbjct: 442 ILS--ANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVER 499

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV  W   +SG  Q G  H A   F+ M+R  +  D+ T++  L+A A T  L   +++H
Sbjct: 500 NVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVH 559

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              + +G  S + VGN+L++MY+K G V
Sbjct: 560 SHAVNAGLVSDLRVGNALVHMYAKCGSV 587


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 306/988 (30%), Positives = 470/988 (47%), Gaps = 128/988 (12%)

Query: 49   SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN--NLMTMYSRCGSLVY 106
            SSS+ + +    R   S   L      HA+I+ S       +T+  NL +++ +C     
Sbjct: 25   SSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCD---L 81

Query: 107  ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
            AR +FD  P+   I WNS++ AY  S + N     E   ++  + E      + T   +L
Sbjct: 82   ARSVFDSTPNPSRILWNSMIRAYTRSKQYN-----EALEMYYCMVEKGLEPDKYTFTFVL 136

Query: 167  KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
            K C  +  +      HG   + GL  D F+   LV++YSK G ++ A+ +FD M +RDVV
Sbjct: 137  KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196

Query: 227  LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYA 285
             W  M+   +++    E    F  +   G+ P   S+  +   I  L        +  Y 
Sbjct: 197  AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256

Query: 286  IK-----------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIEC 319
             +           + LY+   +V               V W   ++GY   G     +E 
Sbjct: 257  FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLEL 316

Query: 320  FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
            F  M   NV+ + V+ + A  A A T +L  G++IHG  L+    S ++V   L+ MY+K
Sbjct: 317  FDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAK 376

Query: 380  MG-------CVCGL------------------------------------RTDQFTLASV 396
             G          GL                                    + ++ TL S+
Sbjct: 377  CGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSI 436

Query: 397  LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
            L A + L   L L K IH   +K D  +D    TAL+ +Y + G    A   F      D
Sbjct: 437  LPACADLSL-LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495

Query: 457  LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
            + TWN++I GY    + + A+++F  +  S    D  T+   V AC  L  L QG  +H 
Sbjct: 496  IVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHG 555

Query: 517  YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
              +K GFE D  V + ++DMY KCG++  A+ +FN      D+V W  +I+  + NG   
Sbjct: 556  LIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615

Query: 576  LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
             A+S +HQMRL    P+  TF  ++ A++ L A  +G   HA +I++   S+  VG SL+
Sbjct: 616  EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLI 675

Query: 636  DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            DMYAKCG ++ +  LF +MD ++TV WNAML G A HG+G+  + LF  M+   V+ DSV
Sbjct: 676  DMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 735

Query: 696  TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
            +F+ VLSAC + GLV E  + FH M +KY I+P++EHY+ +VD LGRAG   E    I  
Sbjct: 736  SFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKV 795

Query: 756  MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
            MP E  A +  ALLG+CR+  + + G+   + L+ LEP + + +V+LS+I+A + +W D 
Sbjct: 796  MPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 855

Query: 816  TSARGEMKRKNVKKDP----------------ADLIFAKVEG-------LIKRIKEGGYV 852
              AR +M    +KK P                 D    ++E        L++++++ GYV
Sbjct: 856  GKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYV 915

Query: 853  PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------- 893
            PD   VL +VEEE+KE  LY HSE+LA  + L++TPP S I                   
Sbjct: 916  PDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFI 975

Query: 894  --LSNKEPLY--ANRFHHLRDGMCPCAD 917
              ++ +  +   A RFHH  DG+C C D
Sbjct: 976  SKITTRRIIVRDATRFHHFEDGICSCND 1003


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 306/988 (30%), Positives = 469/988 (47%), Gaps = 128/988 (12%)

Query: 49   SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN--NLMTMYSRCGSLVY 106
            SSS+ + +    R   S   L      HA+I+ S       +T+  NL +++ +C     
Sbjct: 25   SSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCD---L 81

Query: 107  ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
            AR +FD  P+   I WNS++ AY  S + N     E   ++  + E      + T   +L
Sbjct: 82   ARSVFDSTPNPSRILWNSMIRAYTRSKQYN-----EALEMYYCMVEKGLEPDKYTFTFVL 136

Query: 167  KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
            K C  +  +      HG   + GL  D F+   LV++YSK G ++ A+ +FD M +RDVV
Sbjct: 137  KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196

Query: 227  LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYA 285
             W  M+   +++    E    F  +   G+ P   S+  +   I  L        +  Y 
Sbjct: 197  AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256

Query: 286  IK-----------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIEC 319
             +           + LY+   +V               V W   ++GY   G     +E 
Sbjct: 257  FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLEL 316

Query: 320  FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
            F  M   NV+ + V+ + A  A A T +L  G++IHG  L+    S ++V   L+ MY+K
Sbjct: 317  FDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAK 376

Query: 380  MG-------CVCGL------------------------------------RTDQFTLASV 396
             G          GL                                    + ++ TL S+
Sbjct: 377  CGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSI 436

Query: 397  LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
            L A + L   L L K IH   +K D  +D    TAL+ +Y + G    A   F      D
Sbjct: 437  LPACADLSL-LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495

Query: 457  LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
            + TWN++I GY    + + A+++F  +  S    D  T+   V AC  L  L QG  +H 
Sbjct: 496  IVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHG 555

Query: 517  YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
              +K GFE D  V + ++DMY KCG++  A+ +FN      D+V W  +I+  + NG   
Sbjct: 556  LIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615

Query: 576  LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
             A+S +HQMRL    P+  TF  ++ A++ L A  +G   HA +I++   S+  VG SL+
Sbjct: 616  EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLI 675

Query: 636  DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            DMYAKCG +  +  LF +MD ++TV WNAML G A HG+G+  + LF  M+   V+ DSV
Sbjct: 676  DMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 735

Query: 696  TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
            +F+ VLSAC + GLV E  + FH M +KY I+P++EHY+ +VD LGRAG   E    I  
Sbjct: 736  SFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKV 795

Query: 756  MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
            MP E  A +  ALLG+CR+  + + G+   + L+ LEP + + +V+LS+I+A + +W D 
Sbjct: 796  MPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 855

Query: 816  TSARGEMKRKNVKKDP----------------ADLIFAKVEG-------LIKRIKEGGYV 852
              AR +M    +KK P                 D    ++E        L++++++ GYV
Sbjct: 856  GKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYV 915

Query: 853  PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------- 893
            PD   VL +VEEE+KE  LY HSE+LA  + L++TPP S I                   
Sbjct: 916  PDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFI 975

Query: 894  --LSNKEPLY--ANRFHHLRDGMCPCAD 917
              ++ +  +   A RFHH  DG+C C D
Sbjct: 976  SKITTRRIIVRDATRFHHFEDGICSCND 1003


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/712 (34%), Positives = 381/712 (53%), Gaps = 90/712 (12%)

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +N V+W + + GY++ G  + A+  +  M R+ +  D + FL  + A     +L  G+++
Sbjct: 83  NNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKV 142

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGC-------------------------------- 382
           H   +  GF S VIVG +L +MY+K G                                 
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202

Query: 383 -----------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                      V G++ +  TL SV+   + L   L   KQIH +AI++   +D  V   
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHL-LALEQGKQIHCYAIRSGIESDVLVVNG 261

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+++Y + G++  A  LFE     D+A+WNA+I GY L++  H+AL  F+ M   G + +
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            IT+ + + AC  L  L+QG+Q+H YA++SGFE +  V + +++MY KCG +  A  +F 
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P  + VAW  +ISG   +G    AL+++ +M+  G+ PD F    ++ A +   ALEQ
Sbjct: 382 RMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQ 441

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIH   I+    S+  VG  LVD+YAKCGN+  A  LF++M  ++ V W  M++    
Sbjct: 442 GKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGI 501

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG+GE+ L LF  M+  G + D + F  +L+ACS+ GLV +  + F  M+  YG+ P++E
Sbjct: 502 HGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLE 561

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ LVD LGRAG   EA  +I +M  E  A++  ALLGACR+  + E G+  A+ L  L
Sbjct: 562 HYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFEL 621

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
           +P ++  YVLLSNI+A A +W+DV   R  MK K VKK P                    
Sbjct: 622 DPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRT 681

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              ++ I+A +E L +++++ GYVP+T+  L DVEEE KE  L  HSEKLA ++G+I+T 
Sbjct: 682 HPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTS 741

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P   I                     +  +E +   ANRFHH+++G C C D
Sbjct: 742 PGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGD 793



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 229/526 (43%), Gaps = 82/526 (15%)

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + + W   +  Y  +G  N     +  RL+  ++ +     +L    ++K C S   + A
Sbjct: 84  NAVVWKETIIGYVKNGFWN-----KALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQA 138

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VH   +  G   D  V  AL ++Y+K G +  A+ +FD M +RDVV W  ++  Y++
Sbjct: 139 GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQ 198

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIK------LLL 290
           NG   E   LF ++  +G+ P+  ++  V+ V +  L     +Q+  YAI+      +L+
Sbjct: 199 NGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV 258

Query: 291 YNNNSN----------------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            N   N                      V  WN  + GY     +H A+  F  M    +
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---- 384
           + +S+T +  L A A    L  GQQIHG  ++SGF S  +VGN+L+NMY+K G V     
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378

Query: 385 ---------------------------------------GLRTDQFTLASVLRASSSLPE 405
                                                  G++ D F + SVL A +    
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHF-L 437

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   KQIH + I++   ++  V T L+D+Y + G++  A+ LFE     D+ +W  MI 
Sbjct: 438 ALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMIL 497

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            Y +  +   AL LFS M  +G +LD I     + AC    ++ QG Q +   MKS + L
Sbjct: 498 AYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDYGL 556

Query: 526 --DLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              L   + ++D+  + G + +A  I  ++   PD   W  ++  C
Sbjct: 557 APKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 199/440 (45%), Gaps = 49/440 (11%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P  +L+L   +Q +    +SS+    S++        L  GK  H   + S    D  + 
Sbjct: 202 PYEALALFSEMQVNGIKPNSST--LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L+ MY++CG++  A +LF++MP RD+ SWN+I+  Y+ + + +     E    F  ++
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHH-----EALAFFNRMQ 314

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 + +T+  +L  C     +   + +HGYA++ G   ++ V  ALVN+Y+K G + 
Sbjct: 315 VRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVN 374

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A  LF+ M +++VV W  ++  Y+++G   E   LF+++   G+ PD  ++  VL   +
Sbjct: 375 SAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACA 434

Query: 272 D-LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
             L     +Q+  Y I+       SNVV+    +  Y + G+ + A + F  M     + 
Sbjct: 435 HFLALEQGKQIHGYTIRSGF---ESNVVVGTGLVDIYAKCGNVNTAQKLFERM----PEQ 487

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           D V++   + A            IHG             G   + ++SKM    G + D 
Sbjct: 488 DVVSWTTMILAYG----------IHGH------------GEDALALFSKMQ-ETGTKLDH 524

Query: 391 FTLASVLRASSS---LPEGLHLSKQIHVHAIKND-TVADSFVSTA-LIDVYCRNGSMAEA 445
               ++L A S    + +GL      +   +K+D  +A      A L+D+  R G + EA
Sbjct: 525 IAFTAILTACSHAGLVDQGLQ-----YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEA 579

Query: 446 EYLFENKD-GFDLATWNAMI 464
             + +N     D   W A++
Sbjct: 580 NGIIKNMSLEPDANVWGALL 599



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 651 FKQMDMRNT-VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           F Q D+RN  V+W   ++G  ++G   + L+L+  M+  G+ PD + F+ V+ AC     
Sbjct: 76  FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + +A    H      G E +V   + L     + G  + A ++   MP
Sbjct: 136 L-QAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMP 182


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 280/875 (32%), Positives = 426/875 (48%), Gaps = 120/875 (13%)

Query: 162 LAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            A  L+ C  S   W     +H  A+  GL  D      L+++Y+K G ++ A+ +F+ +
Sbjct: 44  FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL------- 273
             RD V W  ML  YA NG GEE   L+  +H SG+ P    +  VL   +         
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163

Query: 274 ---------GKRHEEQVQAYAIKLLLYNNNSNV-------------VLWNKKLSGYLQVG 311
                    G   E  V    I L L   + ++             V +N  +S + Q G
Sbjct: 164 LVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCG 223

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           +   A+E F  M  S    D VT    LAA A   +LN G+Q+H   LK+G     I+  
Sbjct: 224 NGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEG 283

Query: 372 SLINMYSKMGCV-------------------------------------------CGLRT 388
           SL+++Y K G +                                            G+R 
Sbjct: 284 SLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRP 343

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           ++FT   +LR  +   E ++L +QIH+ +IK    +D +VS  LID+Y + G + +A  +
Sbjct: 344 NEFTYPCLLRTCTYAGE-INLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRI 402

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            E  +  D+ +W +MI GY+      +ALE F  M   G   D I +A+A+ AC  +  +
Sbjct: 403 LEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAM 462

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +QG+Q+H+    SG+  D+ + + ++++Y +CG   +A S+F  I   D + W  M+SG 
Sbjct: 463 RQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGF 522

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G  + AL ++ +M  +GV  + FTF   + AS+ L  ++QG+QIHA +IK  C+S+ 
Sbjct: 523 AQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSET 582

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L+ +Y KCG+IEDA + F +M  RN V WN ++   +QHG G E L LF+ MK  
Sbjct: 583 EVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQE 642

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G++P+ VTFIGVL+ACS+ GLV E    F  M  ++GI P  +HY+ +VD LGRAG+   
Sbjct: 643 GLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDR 702

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + +  MP  A+A + R LL ACRV  + E G+  A+ L+ LEP DS++YVLLSN +A 
Sbjct: 703 ARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAV 762

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
             +W      R  MK + V+K+P                       A  I+  +  L  R
Sbjct: 763 TGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDR 822

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN-- 903
           + + GY+    F+  + E+E+K+   + HSEKLA A+GL+S PPS  +   K     N  
Sbjct: 823 LAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDC 882

Query: 904 ---------------------RFHHLRDGMCPCAD 917
                                RFHH  +G C C D
Sbjct: 883 HTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGD 917



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 185/710 (26%), Positives = 329/710 (46%), Gaps = 87/710 (12%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA+ +      DR   N L+ +Y++ G +  ARR+F+++  RD +SW ++L+ YA +G G
Sbjct: 65  HAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLG 124

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E   L+  +  S    +   L+ +L  C  +        VH    K G   +  
Sbjct: 125 E-----EAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  AL+ +Y +FG +  A+ +F  M   D V +  ++  +A+ G GE    +F ++  SG
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLY---------- 291
             PD  ++  +L   + +G  ++ +Q+ +Y +K             L LY          
Sbjct: 240 WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEAL 299

Query: 292 -----NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                 + +NVVLWN  L  Y Q+ D   + + F  M+ + V+ +  T+   L       
Sbjct: 300 EIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG 359

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
            +NLG+QIH  ++K+GF S + V   LI+MYSK G +                       
Sbjct: 360 EINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIA 419

Query: 384 -------C-------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                  C             G+  D   LAS + A + + + +   +QIH     +   
Sbjct: 420 GYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGI-KAMRQGQQIHSRVYVSGYS 478

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           AD  +  AL+++Y R G   EA  LFE  +  D  TWN M+ G+  S    +ALE+F  M
Sbjct: 479 ADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKM 538

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
           + +G + +  T  +++ A   L  +KQGKQ+HA  +K+G   +  V++ ++ +Y KCG++
Sbjct: 539 YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSI 598

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA+  F ++   + V+W T+I+ C  +G    AL ++ QM+  G+ P++ TF  ++ A 
Sbjct: 599 EDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 658

Query: 604 SCLTALEQGRQIHANL-IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
           S +  +E+G     ++  +      P     +VD+  + G ++ A    ++M +  N ++
Sbjct: 659 SHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMV 718

Query: 662 WNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           W  +L     H N   GE   K   +++ H    DS +++ + +A + TG
Sbjct: 719 WRTLLSACRVHKNIEIGELAAKYLLELEPH----DSASYVLLSNAYAVTG 764



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 138/571 (24%), Positives = 256/571 (44%), Gaps = 80/571 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA++       +  + N L+ +Y R GSL  A R+F +MP  D +++N++++ +A 
Sbjct: 162 GRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQ 221

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G G +        +F  +R S      +T+A LL  C S G +   + +H Y LK G+ 
Sbjct: 222 CGNGES-----ALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMS 276

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D  + G+L+++Y K G I EA  +F      +VVLW +ML AY +     + F LF  +
Sbjct: 277 PDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQM 336

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK----------------------- 287
             +G+ P++ +  C+L   +  G+ +  EQ+   +IK                       
Sbjct: 337 VAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWL 396

Query: 288 -----LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                +L      +VV W   ++GY+Q      A+E F +M    +  D++    A++A 
Sbjct: 397 DKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISAC 456

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           AG   +  GQQIH     SG+ + V + N+L+N+Y++ G                     
Sbjct: 457 AGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWN 516

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G++ + FT  S + AS++L + +   KQIH   IK
Sbjct: 517 GMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLAD-IKQGKQIHATVIK 575

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +++ V+ ALI +Y + GS+ +A+  F      +  +WN +I          +AL+L
Sbjct: 576 TGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDL 635

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYV 538
           F  M   G + +++T    + AC  + ++++G     + + + G        + ++D+  
Sbjct: 636 FDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILG 695

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           + G +  A+    ++P + + + W T++S C
Sbjct: 696 RAGQLDRARKFVEEMPVSANAMVWRTLLSAC 726



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 174/355 (49%), Gaps = 34/355 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S  DL  GK  H+ +L +   PD  +  +L+ +Y +CG +V A  +F      
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++ WN +L AY     G   ++ + F LF  +  +    +  T   LL+ C  +G +  
Sbjct: 309 NVVLWNLMLVAY-----GQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H  ++K G   D +VSG L+++YSK+G + +A+ + + ++ +DVV W  M+  Y +
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-------VQAYAIKLLL 290
           + F +E    F D+   G+ PD+  +   +   + +    + Q       V  Y+  + +
Sbjct: 424 HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI 483

Query: 291 YNNNSNV----------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +N   N+                      + WN  +SG+ Q G    A+E F+ M ++ V
Sbjct: 484 WNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +Y+  TF+ +++A A   ++  G+QIH T +K+G  S   V N+LI++Y K G +
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSI 598



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 153/299 (51%), Gaps = 2/299 (0%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHA 516
           A+ N  + G++   +  K L LF+        L  +  A A++ C G +        +HA
Sbjct: 7   ASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHA 66

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+  G   D    + ++D+Y K G +  A+ +F  + A D+V+W  M+SG   NG  + 
Sbjct: 67  KAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEE 126

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           A+ +YHQM  SGVVP  +  + ++ A +     EQGR +HA + K    S+  VG +L+ 
Sbjct: 127 AVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIA 186

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y + G++  A  +F +M   + V +N ++   AQ GNGE  L++FE+M+  G  PD VT
Sbjct: 187 LYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVT 246

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
              +L+AC+  G +++  +  H    K G+ P+      L+D   + G   EA E+  S
Sbjct: 247 IASLLAACASIGDLNKG-KQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 141/314 (44%), Gaps = 34/314 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR      ++ LG+  H   + +    D +++  L+ MYS+ G L  ARR+ + +  +D
Sbjct: 351 LLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKD 410

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW S++A Y        E   E    F+ ++    +   + LA  +  C     +   
Sbjct: 411 VVSWTSMIAGYVQH-----EFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H      G   D  +  ALVN+Y++ G+ +EA  LF+ ++ +D + W  M+  +A++
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK---------- 287
           G  EE   +F+ ++++G+  +  +    +   ++L   +  +Q+ A  IK          
Sbjct: 526 GLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVA 585

Query: 288 ---LLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              + LY                +  N V WN  ++   Q G    A++ F  M +  ++
Sbjct: 586 NALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLK 645

Query: 330 YDSVTFLVALAAVA 343
            + VTF+  LAA +
Sbjct: 646 PNDVTFIGVLAACS 659



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 19/176 (10%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +D+  GK  HA ++ +    +  + N L+++Y +CGS+  A+  F +M +R+ +SWN+I+
Sbjct: 561 ADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTII 620

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS-------GYVWASE 179
            + +  G G      E   LF  +++     + +T   +L  C          GY  +  
Sbjct: 621 TSCSQHGWG-----LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMS 675

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKI-REAKFLFDGMQERDVVLWKVMLRA 234
           + HG   +     D +    +V+I  + G++ R  KF+ +     + ++W+ +L A
Sbjct: 676 SEHGIHPRP----DHY--ACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSA 725


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 307/969 (31%), Positives = 463/969 (47%), Gaps = 133/969 (13%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI---LAA 128
            G+  H++IL      +  L+  L+  Y   G L  A ++FD+MP+R + +WN +   LA+
Sbjct: 87   GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELAS 146

Query: 129  YAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYAL 186
             + SG+         F LF R + E++T  +  T + +L+ C      +   E +H   +
Sbjct: 147  RSLSGKV--------FCLFGRMVNENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARII 197

Query: 187  KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
              GL     V   L+++YS+ G +  A+ +FDG+  +D   W  M+   ++N    E   
Sbjct: 198  YQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIR 257

Query: 247  LFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQAYAIKLL- 289
            LF D++  G+ P   +   VL                G++  LG   +  V    + L  
Sbjct: 258  LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 317

Query: 290  ----------LYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                      +++N S  + V +N  ++G  Q G    A+E F  M    ++ DS T   
Sbjct: 318  HLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLAS 377

Query: 338  ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------ 379
             + A +    L  GQQ+H  T K GF S   +  +L+N+Y+K                  
Sbjct: 378  LVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVEN 437

Query: 380  ------MGCVCGLRTD-------------------QFTLASVLRASSSLPEGLHLSKQIH 414
                  M    GL  D                   Q+T  S+L+    L + L L +QIH
Sbjct: 438  VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD-LELGEQIH 496

Query: 415  VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
               IK     +++V + LID+Y + G +  A  +     G D+ +W  MI GY   N   
Sbjct: 497  SQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 556

Query: 475  KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            KAL  F  M   G R DE+ +  AV AC  L  LK+G+Q+HA A  SGF  DL   + ++
Sbjct: 557  KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 616

Query: 535  DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
             +Y KCG + +A   F    A D++AW  ++SG   +G  + AL ++ +M   G+  + F
Sbjct: 617  TLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNF 676

Query: 595  TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            TF   VKA+S    ++QG+Q+HA + K    S+  V  +++ MYAKCG+I DA   F ++
Sbjct: 677  TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLEL 736

Query: 655  DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             M+N V WNAM+   ++HG G E L  F+ M    V P+ VT +GVLSACS+ GLV +  
Sbjct: 737  SMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 796

Query: 715  ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
            E F  M  +YG+ P+ EHY  +VD L RAG    A + IL MP E  A + R LL AC V
Sbjct: 797  EYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVV 856

Query: 775  QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
              + E G++ A  L+ LEP DS+ YVLLSN++A   +WD     R +MK K VKK+P   
Sbjct: 857  HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQS 916

Query: 832  --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                AD I    + L KR  E GYV D   +L ++++E+K+  +
Sbjct: 917  WIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTI 976

Query: 872  YYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHL 908
            + HSEKLA ++GL+S P +  I                     +SN+E +   A RFHH 
Sbjct: 977  FIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHF 1036

Query: 909  RDGMCPCAD 917
              G C C D
Sbjct: 1037 EGGACSCKD 1045



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 185/678 (27%), Positives = 301/678 (44%), Gaps = 80/678 (11%)

Query: 161 TLAPLLKLCL-SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           TL  LL+ CL ++G +     +H   LK+G   +  +S  L++ Y   G +  A  +FD 
Sbjct: 69  TLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDE 128

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE- 278
           M ER +  W  M++  A      +VF LF  +    + P++ +   VL          + 
Sbjct: 129 MPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDV 188

Query: 279 -EQVQAYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYLQ 309
            EQ+ A  I              + LY+ N  V                 W   +SG  +
Sbjct: 189 VEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSK 248

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 AI  F +M    +      F   L+A    ++L +G+Q+HG  LK GF S   V
Sbjct: 249 NECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 308

Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
            N+L+++Y  +G +                                            GL
Sbjct: 309 CNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGL 368

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             D  TLAS++ A SS    L   +Q+H +  K    ++  +  AL+++Y +   +  A 
Sbjct: 369 EPDSNTLASLVVACSS-DGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETAL 427

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
             F   +  ++  WN M+  Y L ++   +  +F  M       ++ T  + +K C  L 
Sbjct: 428 NYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 487

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L+ G+Q+H+  +K+ F+L+  V S ++DMY K G +  A  I       D V+WTTMI+
Sbjct: 488 DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G      +D AL+ + QM   G+  DE      V A + L AL++G+QIHA       SS
Sbjct: 548 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 607

Query: 627 D-PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           D PF   +LV +Y+KCGNIE+AY+ F+Q +  + + WNA++ G  Q GN EE L++F  M
Sbjct: 608 DLPFQN-ALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARM 666

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G++ ++ TF   + A S T  + +  +  H +  K G + E E  + ++    + G 
Sbjct: 667 NREGIDSNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNAIISMYAKCGS 725

Query: 746 TKEAGE--LILSMPFEAS 761
             +A +  L LSM  E S
Sbjct: 726 ISDAKKQFLELSMKNEVS 743



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 248/590 (42%), Gaps = 88/590 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L +G+  H  +L      D ++ N L+++Y   GSL+ A  +F  M  R
Sbjct: 276 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQR 335

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N+++   +  G G      +   LF+ ++         TLA L+  C S G +++
Sbjct: 336 DAVTYNTLINGLSQCGYGE-----KAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y  K+G   ++ + GAL+N+Y+K   I  A   F   +  +VVLW VML AY  
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
                  F +F  +    + P+  +   +L     LG     EQ+ +  IK         
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYV 510

Query: 288 -------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                              +L+     +VV W   ++GY Q   +  A+  F  M+   +
Sbjct: 511 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 570

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
           + D V    A++A AG   L  GQQIH     SGF S +   N+L+ +YSK G +     
Sbjct: 571 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYL 630

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G+ ++ FT  S ++A+S    
Sbjct: 631 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETA- 689

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            +   KQ+H    K    +++ V  A+I +Y + GS+++A+  F      +  +WNAMI 
Sbjct: 690 NMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMIN 749

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMK 520
            Y       +AL+ F  M  S  R + +T+   + AC  + ++ +G +        Y + 
Sbjct: 750 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLA 809

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
              E  +CV    +DM  + G +  A+    ++P  PD + W T++S CV
Sbjct: 810 PKPEHYVCV----VDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACV 855



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 215/471 (45%), Gaps = 47/471 (9%)

Query: 384 CGLRTDQFTLA----SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           CG+R +  TL       L+ + SL EG  L  QI      N+      +S  L+D Y   
Sbjct: 61  CGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNAC----LSEKLLDFYLFK 116

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G +  A  +F+      + TWN MI      + S K   LF  M       +E T +  +
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL 176

Query: 500 KAC-GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           +AC G  +     +Q+HA  +  G      V + ++D+Y + G +  A+ +F+ +   D 
Sbjct: 177 EACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDH 236

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            +W  MISG   N  E  A+ ++  M + G++P  + F+ ++ A   + +LE G Q+H  
Sbjct: 237 SSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 296

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++KL  SSD +V  +LV +Y   G++  A  +F  M  R+ V +N ++ GL+Q G GE+ 
Sbjct: 297 VLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 356

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG------------- 725
           ++LF+ M+  G+EPDS T   ++ ACS  G +    +  H    K G             
Sbjct: 357 MELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG-QQLHAYTTKLGFASNDKIEGALLN 415

Query: 726 ---------------IEPEVEH---YSFLVDALGRAGRTKEAGELILSMPFE---ASASM 764
                          +E EVE+   ++ ++ A G     + +  +   M  E    +   
Sbjct: 416 LYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 475

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV--LLSNIFAAANQWD 813
           + ++L  C   GD E G+ +  +++    F  +AYV  +L +++A   + D
Sbjct: 476 YPSILKTCIRLGDLELGEQIHSQIIK-TSFQLNAYVCSVLIDMYAKLGKLD 525



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 27/221 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S ++ A  T+++  GK  HA I  +    +  + N +++MY++CGS+  A++ F ++  +
Sbjct: 680 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMK 739

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
           + +SWN+++ AY+  G G     +E    F  +  S    + +TL  +L  C   G    
Sbjct: 740 NEVSWNAMINAYSKHGFG-----SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDK 794

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK-FLFDGMQERDVVLWK 229
              Y  +  T +G A K     + +V   +V++ ++ G +  AK F+ +   E D ++W+
Sbjct: 795 GIEYFESMNTEYGLAPKP----EHYV--CVVDMLTRAGLLSRAKDFILEMPIEPDALVWR 848

Query: 230 VMLRA---YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            +L A   +     GE   H  ++L      P+D +   +L
Sbjct: 849 TLLSACVVHKNMEIGEFAAHHLLELE-----PEDSATYVLL 884


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 286/881 (32%), Positives = 438/881 (49%), Gaps = 125/881 (14%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           + ++ + LL  C ++  +     +H +  K GL  D  +   L+N+YSK      A+ L 
Sbjct: 55  TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLV 114

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLG 274
           D   E D+V W  ++  YA+NG G      F ++H  G+  ++ +   VL    ++ DL 
Sbjct: 115 DESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL- 173

Query: 275 KRHEEQVQAYAI----------------------------KLLLYNNNSNVVLWNKKLSG 306
            R  +QV    +                            +L       NVV WN   S 
Sbjct: 174 -RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y+Q+     A+  F  M+ S ++ +  +    + A  G  + + G+ IHG  +K G+   
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292

Query: 367 VIVGNSLINMYSKMG--------------------------CV----------------- 383
               N+L++MY+K+G                          CV                 
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 384 CGLRTDQFTLASVLRASSSLPEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
            G+  + FTL+S L+A + +  GL  L +Q+H   +K D  +D FVS  L+D+Y +   +
Sbjct: 353 SGICPNIFTLSSALKACAGM--GLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A   F      DL  WNA+I GY       +AL LF  MH  G   ++ T++T +K+ 
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             L ++   +Q+H  ++KSGF  D+ V + ++D Y KC  + DA+ IF +    D V++T
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +MI+     G+ + AL ++ +M+   + PD F  + L+ A + L+A EQG+Q+H +++K 
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 590

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               D F G SLV+MYAKCG+I+DA   F ++  R  V W+AM+ GLAQHG+G + L+LF
Sbjct: 591 GFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLF 650

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             M   GV P+ +T + VL AC++ GLV+EA   F  M E +G +P  EHY+ ++D LGR
Sbjct: 651 NQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGR 710

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG+  EA EL+  MPFEA+AS+  ALLGA R+  D E G+  AE L  LEP  S  +VLL
Sbjct: 711 AGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLL 770

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKV 839
           +NI+A+A +W++V   R  M+   VKK+P                       +  I+AK+
Sbjct: 771 ANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKL 830

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEP 899
           + L   + + GYVP  +  L DVE+ EKE  LY+HSEKLA A+GLI+TP  + I   K  
Sbjct: 831 DELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNL 890

Query: 900 LYA-----------------------NRFHHLRDGMCPCAD 917
                                     NRFHH +DG C C D
Sbjct: 891 RVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGD 931


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 274/871 (31%), Positives = 428/871 (49%), Gaps = 119/871 (13%)

Query: 165  LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            +L+ C S G +   + +HG  +K G+  D  +  +LVN+Y+K G    A  +F  + ERD
Sbjct: 134  MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 225  VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-HE 278
            VV W  ++  +   G+G    +LF ++ R G+  ++ +    L   S     + GK+ H 
Sbjct: 194  VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 279  EQVQA-----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
            E ++                         A ++ L     N V WN  L+G+ Q+GD   
Sbjct: 254  EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 316  AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
             +  F  M  S + +   T    L   A + NL  GQ +H   ++ G      +   L++
Sbjct: 314  VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 376  MYSKMG-------------------------CV------------------CGLRTDQFT 392
            MYSK G                         C+                   G+  +QFT
Sbjct: 374  MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433

Query: 393  LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
            LAS++ A++ L + L+  + IH    K     D+ V  AL+ +Y + GS+ +   +FE  
Sbjct: 434  LASLVSAATDLGD-LYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT 492

Query: 453  DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
               DL +WNA++ G+  +      L +F+ M   G   +  T  + +++C  L  +  GK
Sbjct: 493  TNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 552

Query: 513  QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            Q+HA  +K+  + +  V + ++DMY K   + DA++IFN +   D  AWT +++G   +G
Sbjct: 553  QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 612

Query: 573  EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
            + + A+  + QM+  GV P+EFT A  +   S +  L+ GRQ+H+  IK   S D FV  
Sbjct: 613  QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVAS 672

Query: 633  SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
            +LVDMYAKCG +EDA ++F  +  R+TV WN ++ G +QHG G + LK FE M   G  P
Sbjct: 673  ALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVP 732

Query: 693  DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
            D VTFIGVLSACS+ GL+ E  ++F+ + + YGI P +EHY+ +VD LGRAG+  E    
Sbjct: 733  DEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESF 792

Query: 753  ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
            I  M   ++  +   +LGAC++ G+ E G+  A KL  LEP   S Y+LLSN+FAA   W
Sbjct: 793  IEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMW 852

Query: 813  DDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEG 849
            DDVT+ R  M  + VKK+P                          I  K++ L +++   
Sbjct: 853  DDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSV 912

Query: 850  GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------- 893
            GY P+TD VL +V + EK+  L+YHSE+LA A+ L+ST     I                
Sbjct: 913  GYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFM 972

Query: 894  -----LSNKEPLYA--NRFHHLRDGMCPCAD 917
                 ++N+E +    N FHH ++G C C +
Sbjct: 973  KSISEITNQELVVRDINCFHHFKNGSCSCQN 1003



 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 203/722 (28%), Positives = 335/722 (46%), Gaps = 98/722 (13%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           F S     Q+  +LR   S  DL  GK+ H +++ S   PD  L N+L+ +Y++CGS  Y
Sbjct: 122 FDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANY 181

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           A ++F ++P+RD++SW +++  +   G G+         LF  +R      +  T A  L
Sbjct: 182 ACKVFGEIPERDVVSWTALITGFVAEGYGSG-----AVNLFCEMRREGVEANEFTYATAL 236

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           K C     +   + VH  A+K+G   D FV  ALV++Y+K G++  A+ +F  M +++ V
Sbjct: 237 KACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAV 296

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGL------------------------------ 256
            W  +L  +A+ G  E+V +LF  +  S +                              
Sbjct: 297 SWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLA 356

Query: 257 ----CPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
               C  DE + C L  + S  G      +   A+K+ +   + +VV W+  ++   Q G
Sbjct: 357 IRIGCELDEFISCCLVDMYSKCG------LAGDALKVFVRIEDPDVVSWSAIITCLDQKG 410

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
            +  A E F  M  S V  +  T    ++A     +L  G+ IH    K GF     V N
Sbjct: 411 QSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCN 470

Query: 372 SLINMYSKMG--------------------------------CVCGLR-----------T 388
           +L+ MY K+G                                C  GLR            
Sbjct: 471 ALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNP 530

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           + +T  S+LR+ SSL + + L KQ+H   +KN    + FV TAL+D+Y +N  + +AE +
Sbjct: 531 NMYTFISILRSCSSLSD-VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 589

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F      DL  W  ++ GY       KA++ F  M   G + +E T+A+++  C  +  L
Sbjct: 590 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 649

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G+Q+H+ A+K+G   D+ V+S ++DMY KCG + DA+ +F+ + + D V+W T+I G 
Sbjct: 650 DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGY 709

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G+   AL  +  M   G VPDE TF  ++ A S +  +E+G++ H N +       P
Sbjct: 710 SQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITP 768

Query: 629 FVG--ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN---GEE-TLKL 681
            +     +VD+  + G   +     ++M +  N ++W  +L     HGN   GE   +KL
Sbjct: 769 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL 828

Query: 682 FE 683
           FE
Sbjct: 829 FE 830



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 218/426 (51%), Gaps = 13/426 (3%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           + +LR  +S  + L+  K IH   IK+    DS +  +L++VY + GS   A  +F    
Sbjct: 132 SGMLRTCASKGD-LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D+ +W A+I G++       A+ LF  M   G   +E T ATA+KAC   L L+ GKQ
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +HA A+K G   DL V S ++D+Y KCG MV A+ +F  +P  + V+W  +++G    G+
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            +  L+++ +M  S +   +FT + ++K  +    L  G+ +H+  I++ C  D F+   
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           LVDMY+KCG   DA  +F +++  + V W+A++  L Q G   E  ++F+ M+  GV P+
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
             T   ++SA +  G +    E+ H    KYG E +    + LV    + G  ++   + 
Sbjct: 431 QFTLASLVSAATDLGDLYYG-ESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV- 488

Query: 754 LSMPFEASASMH----RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
               FEA+ +       ALL         +TG  +  +++A E F+ + Y  +S I  + 
Sbjct: 489 ----FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLA-EGFNPNMYTFIS-ILRSC 542

Query: 810 NQWDDV 815
           +   DV
Sbjct: 543 SSLSDV 548


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 292/940 (31%), Positives = 453/940 (48%), Gaps = 166/940 (17%)

Query: 89   FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            F  N  +    R G +  ARR+F++M  RD++SWNS++  Y+ +G+     V E   LF 
Sbjct: 172  FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGK-----VDEARLLFD 226

Query: 149  SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            +                                  +  K    W   ++G     Y+K G
Sbjct: 227  A----------------------------------FVGKNIRTWTILLTG-----YAKEG 247

Query: 209  KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            +I EA+ +F+ M ER+VV W  M+  Y +NG  +    LF ++    +   +  V     
Sbjct: 248  RIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVT---- 303

Query: 269  VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                 G  H  ++ + A +L       N V W   +SGY+ + D   A + FV M R+  
Sbjct: 304  -----GYCHCYRM-SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVA 357

Query: 329  QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
            + D   F+V L+A+ G D+L L   +    +K+G+   V+VG++++N Y++ G +     
Sbjct: 358  RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMH 417

Query: 384  ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI-KN 420
                                  CG   D   L   +   +   +   ++    V  I K 
Sbjct: 418  FFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKA 477

Query: 421  DTVADSFVS------TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              + D  ++       A+I  Y +NG + EA+ LF+     + A+W AMI G++ +  S 
Sbjct: 478  RLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESR 537

Query: 475  KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            +ALEL   +H SG    + +  +A+ AC  +  ++ G+ +H+ A+K+G + +  V +G++
Sbjct: 538  EALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLI 597

Query: 535  DMYVKCG-------------------------------AMVDAQSIFNDIPAPDDVAWTT 563
             MY KCG                                + DA+ +F  +P  D V+WT 
Sbjct: 598  SMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTA 657

Query: 564  MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
            +IS  V  G  ++AL ++  M   G+ P++ T   L+ A   L A++ G Q HA + KL 
Sbjct: 658  IISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLG 717

Query: 624  CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              +  FVG SL+ MY KCG  ED + +F++M   + + WNA+LVG AQ+G G+E +K+FE
Sbjct: 718  FDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFE 776

Query: 684  DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
             M+  G+ PD ++F+GVL ACS+ GLV E + +F+ M +KYGI P V HY+ +VD LGRA
Sbjct: 777  QMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRA 836

Query: 744  GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
            G   EA  LI +MP +  + +  ALLGACR+  + E G+ VAE+L  +    S+ YVLLS
Sbjct: 837  GYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLS 896

Query: 804  NIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADLIFAKVEGLIKRIK 847
            N+FA+   WD V   R  MK + + K+P                 D    ++E +   +K
Sbjct: 897  NLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956

Query: 848  E-------GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
            E        GY+PDT+FVL DVEEE+K+  L YHSEKLA  +G++STP  S I       
Sbjct: 957  EYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLR 1016

Query: 894  ----------LSNKEPLY------ANRFHHLRDGMCPCAD 917
                        +K  L        NRFHH RDG C C D
Sbjct: 1017 ICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGD 1056



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 168/705 (23%), Positives = 322/705 (45%), Gaps = 90/705 (12%)

Query: 61  RHAISTSDLLLGKSTHARILNS----SQIPDRFLT--NNLMTMYSRCGSLVYARRLFDKM 114
           R+ +S + ++ G   +  + N+     ++P++ +   N+++T Y  C  +  AR LFD+M
Sbjct: 262 RNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM 321

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+R+ +SW  +++ Y H       +  E + +F  +  ++    +     +L        
Sbjct: 322 PERNSVSWMVMISGYVH-----ISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDD 376

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +    ++   A+K G   D  V  A++N Y++ G +  A   F+ M ER+   W  M+ A
Sbjct: 377 LELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAA 436

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN- 293
           +A+ G  ++   L+  +    +     +   ++   + +G+  + +        L+++  
Sbjct: 437 FAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKAR--------LIFDEI 484

Query: 294 -NSNVVLWNKKLSGYLQVG-------------------------------DNHGAIECFV 321
            N NVV WN  ++GY Q G                               ++  A+E  +
Sbjct: 485 LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLI 544

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            + RS       +F  AL+A A   ++ +G+ IH   +K+G      V N LI+MY+K  
Sbjct: 545 ELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAK-- 602

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
             CG                ++ +G H+ + I V     DTV+      +LI     N  
Sbjct: 603 --CG----------------NVEDGSHVFRTIRV----KDTVS----WNSLISGLSENYM 636

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           + +A  +FE     D+ +W A+I  Y+ + +   AL+LF  M   G + +++T+ + + A
Sbjct: 637 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSA 696

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           CG L  +K G+Q HA   K GF+  L V + ++ MY KCG   D   +F ++P  D + W
Sbjct: 697 CGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITW 755

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             ++ GC  NG    A+ I+ QM + G++PD+ +F  ++ A S    +++G   H N + 
Sbjct: 756 NAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEG-WAHFNSMT 814

Query: 622 LDCSSDPFV--GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEET 678
                 P V     +VD+  + G + +A  L + M ++ ++V+W A+L     H N E  
Sbjct: 815 QKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELG 874

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            ++ E +     +P S T++ + +  +  G+  +  E   LM+++
Sbjct: 875 QRVAERL-FQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQ 918



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 173/400 (43%), Gaps = 64/400 (16%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L LL  L +S   S  S S + S L    +  D+ +G+  H+  + +    + ++ N L
Sbjct: 539 ALELLIELHRS--GSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGL 596

Query: 95  MTMYSRCGS-------------------------------LVYARRLFDKMPDRDLISWN 123
           ++MY++CG+                               L  AR +F+KMP RD++SW 
Sbjct: 597 ISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWT 656

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           +I++AY  +G G          LF  +       ++LT+  LL  C + G +   E  H 
Sbjct: 657 AIISAYVQAGHGEV-----ALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHA 711

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
              K+G     FV  +L+ +Y K G   +   +F+ M E D++ W  +L   A+NG G+E
Sbjct: 712 LIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKE 770

Query: 244 VFHLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
              +F  +   G+ PD  S   VL      G++ +         Q Y I  L+Y+    V
Sbjct: 771 AIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMV 830

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI--- 354
            L  +  +GYL   +    IE   NM    V+ DSV +   L A     N+ LGQ++   
Sbjct: 831 DLLGR--AGYL--SEAEALIE---NM---PVKPDSVIWEALLGACRIHRNVELGQRVAER 880

Query: 355 --HGTTLKSGFYSAVIVGNSLIN--MYSKMGCVCGLRTDQ 390
               T  KS  Y  V++ N   +  M+ K+  +  L  DQ
Sbjct: 881 LFQMTKPKSATY--VLLSNLFASQGMWDKVAEIRKLMKDQ 918



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 127/545 (23%), Positives = 214/545 (39%), Gaps = 130/545 (23%)

Query: 57  FSILRHAIS-TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           F ++  AI+   DL L  S     + +    D  + + ++  Y+R GSL  A   F+ MP
Sbjct: 364 FVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP 423

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +R+  SW +++AA+A  G      + +  +L+  + E    T    +    ++    G +
Sbjct: 424 ERNEYSWTTMIAAFAQCGR-----LDDAIQLYERVPEQTVATKTAMMTAYAQV----GRI 474

Query: 176 WASETVHGYALKIGLV-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
             +  +    L   +V W+  ++G     Y++ G ++EAK LF  M  ++   W  M+  
Sbjct: 475 QKARLIFDEILNPNVVAWNAIIAG-----YTQNGMLKEAKDLFQKMPVKNSASWAAMIAG 529

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV-QAYAIK------ 287
           + +N    E   L ++LHRSG  P D S    L   +++G     +V  + AIK      
Sbjct: 530 FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 589

Query: 288 -------LLLYNNNSNV---------------VLWNKKLSG------------------- 306
                  + +Y    NV               V WN  +SG                   
Sbjct: 590 SYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPK 649

Query: 307 ------------YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
                       Y+Q G    A++ F++M+   ++ + +T    L+A      + LG+Q 
Sbjct: 650 RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL-------RTDQFTLASVLR--ASSSL-P 404
           H    K GF + + VGNSLI MY K G   G          D  T  +VL   A + L  
Sbjct: 710 HALIFKLGFDTFLFVGNSLITMYFKCGYEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGK 769

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVS----------------------------------T 430
           E + + +Q+ V  I  D +  SF+                                   T
Sbjct: 770 EAIKIFEQMEVEGILPDQM--SFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYT 827

Query: 431 ALIDVYCRNGSMAEAEYLFENKD-GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            ++D+  R G ++EAE L EN     D   W A++    +    H+ +EL   +    ER
Sbjct: 828 CMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRI----HRNVELGQRV---AER 880

Query: 490 LDEIT 494
           L ++T
Sbjct: 881 LFQMT 885


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 300/966 (31%), Positives = 456/966 (47%), Gaps = 127/966 (13%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            G+  H++IL      +  L+  L   Y   G L  A ++FD+MP+R + +WN ++   A 
Sbjct: 104  GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA- 162

Query: 132  SGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIG 189
                +   + E F LF R + E++T  +  T + +L+ C      +   E +H   L  G
Sbjct: 163  ----SRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217

Query: 190  LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
            L     V   L+++YS+ G +  A+ +FDG++ +D   W  M+   ++N    E   LF 
Sbjct: 218  LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277

Query: 250  DLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQAYAIKLLLYNN 293
            D++  G+ P   +   VL                G++  LG   +  V    + L  +  
Sbjct: 278  DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337

Query: 294  N-------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
            N              + V +N  ++G  Q G    A+E F  M    ++ DS T    + 
Sbjct: 338  NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397

Query: 341  AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------- 379
            A +    L  GQQ+H  T K GF S   +  +L+N+Y+K                     
Sbjct: 398  ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457

Query: 380  ---MGCVCGLRTD-------------------QFTLASVLRASSSLPEGLHLSKQIHVHA 417
               M    GL  D                   Q+T  S+L+    L + L L +QIH   
Sbjct: 458  WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD-LELGEQIHSQI 516

Query: 418  IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            IK +   +++V + LID+Y + G +  A  +     G D+ +W  MI GY   N   KAL
Sbjct: 517  IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576

Query: 478  ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
              F  M   G R DE+ +  AV AC  L  LK+G+Q+HA A  SGF  DL   + ++ +Y
Sbjct: 577  TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636

Query: 538  VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
             +CG + ++   F    A D++AW  ++SG   +G  + AL ++ +M   G+  + FTF 
Sbjct: 637  SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696

Query: 598  ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
              VKA+S    ++QG+Q+HA + K    S+  V  +L+ MYAKCG+I DA   F ++  +
Sbjct: 697  SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756

Query: 658  NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
            N V WNA++   ++HG G E L  F+ M    V P+ VT +GVLSACS+ GLV +    F
Sbjct: 757  NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816

Query: 718  HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
              M  +YG+ P+ EHY  +VD L RAG    A E I  MP +  A + R LL AC V  +
Sbjct: 817  ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876

Query: 778  TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------ 831
             E G++ A  L+ LEP DS+ YVLLSN++A + +WD     R +MK K VKK+P      
Sbjct: 877  MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936

Query: 832  -----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                             AD I    + L KR  E GYV D   +L +++ E+K+  ++ H
Sbjct: 937  VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 996

Query: 875  SEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDG 911
            SEKLA ++GL+S P +  I                     +SN+E +   A RFHH   G
Sbjct: 997  SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1056

Query: 912  MCPCAD 917
             C C D
Sbjct: 1057 ACSCKD 1062



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 179/671 (26%), Positives = 302/671 (45%), Gaps = 78/671 (11%)

Query: 161 TLAPLLKLCL-SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           TL  LL+ CL ++G +     +H   LK+GL  +  +S  L + Y   G +  A  +FD 
Sbjct: 86  TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDL 273
           M ER +  W  M++  A      EVF LFV +    + P++ +   VL       V  D+
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205

Query: 274 GKRHEEQVQAYAIK---------LLLYNNNSNVVL---------------WNKKLSGYLQ 309
            ++   ++    ++         + LY+ N  V L               W   +SG  +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 AI  F +M    +      F   L+A    ++L +G+Q+HG  LK GF S   V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325

Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
            N+L+++Y  +G +                                            GL
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             D  TLAS++ A S+    L   +Q+H +  K    +++ +  AL+++Y +   +  A 
Sbjct: 386 EPDSNTLASLVVACSA-DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
             F   +  ++  WN M+  Y L ++   +  +F  M       ++ T  + +K C  L 
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L+ G+Q+H+  +K+ F+L+  V S ++DMY K G +  A  I       D V+WTTMI+
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G      +D AL+ + QM   G+  DE      V A + L AL++G+QIHA       SS
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624

Query: 627 D-PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           D PF   +LV +Y++CG IE++Y+ F+Q +  + + WNA++ G  Q GN EE L++F  M
Sbjct: 625 DLPFQN-ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G++ ++ TF   + A S T  + +  +  H +  K G + E E  + L+    + G 
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGS 742

Query: 746 TKEAGELILSM 756
             +A +  L +
Sbjct: 743 ISDAEKQFLEV 753



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 247/590 (41%), Gaps = 88/590 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L +G+  H  +L      D ++ N L+++Y   G+L+ A  +F  M  R
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N+++   +  G G      +   LF+ +          TLA L+  C + G ++ 
Sbjct: 353 DAVTYNTLINGLSQCGYGE-----KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y  K+G   +  + GAL+N+Y+K   I  A   F   +  +VVLW VML AY  
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
                  F +F  +    + P+  +   +L     LG     EQ+ +  IK         
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527

Query: 288 -------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                              +L+     +VV W   ++GY Q   +  A+  F  M+   +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
           + D V    A++A AG   L  GQQIH     SGF S +   N+L+ +YS+ G +     
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G+  + FT  S ++A+S    
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA- 706

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            +   KQ+H    K    +++ V  ALI +Y + GS+++AE  F      +  +WNA+I 
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-YAMK 520
            Y       +AL+ F  M  S  R + +T+   + AC  + ++ +G    + M++ Y + 
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
              E  +CV    +DM  + G +  A+    ++P  PD + W T++S CV
Sbjct: 827 PKPEHYVCV----VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 214/464 (46%), Gaps = 43/464 (9%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           +T ++ L   L+ + SL EG    +++H   +K    ++  +S  L D Y   G +  A 
Sbjct: 85  QTLKWLLEGCLKTNGSLDEG----RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCL 505
            +F+      + TWN MI      N   +   LF  M +     +E T +  ++AC G  
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +     +Q+HA  +  G      V + ++D+Y + G +  A+ +F+ +   D  +W  MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           SG   N  E  A+ ++  M + G++P  + F+ ++ A   + +LE G Q+H  ++KL  S
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           SD +V  +LV +Y   GN+  A  +F  M  R+ V +N ++ GL+Q G GE+ ++LF+ M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG-------------------- 725
              G+EPDS T   ++ ACS  G +    +  H    K G                    
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439

Query: 726 --------IEPEVEH---YSFLVDALGRAGRTKEAGELILSMPFE---ASASMHRALLGA 771
                   +E EVE+   ++ ++ A G     + +  +   M  E    +   + ++L  
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYV--LLSNIFAAANQWD 813
           C   GD E G+ +  +++    F  +AYV  +L +++A   + D
Sbjct: 500 CIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLD 542



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)

Query: 588 GVVPDEFTFAILVKASSCLT---ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           G+ P+  T   L++   CL    +L++GR++H+ ++KL   S+  +   L D Y   G++
Sbjct: 79  GIRPNHQTLKWLLEG--CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             A+ +F +M  R    WN M+  LA      E   LF  M +  V P+  TF GVL AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
               +  +  E  H      G+       + L+D   R G
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 236



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 27/230 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S ++ A  T+++  GK  HA I  +    +  + N L++MY++CGS+  A + F ++  +
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
           + +SWN+I+ AY+  G G     +E    F  +  S    + +TL  +L  C   G    
Sbjct: 757 NEVSWNAIINAYSKHGFG-----SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDK 811

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
              Y  +  + +G + K     + +V   +V++ ++ G +  AK     M  + D ++W+
Sbjct: 812 GIAYFESMNSEYGLSPKP----EHYV--CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 865

Query: 230 VMLRA---YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
            +L A   +     GE   H  ++L      P+D +   +L  +  + K+
Sbjct: 866 TLLSACVVHKNMEIGEFAAHHLLELE-----PEDSATYVLLSNLYAVSKK 910


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 300/966 (31%), Positives = 456/966 (47%), Gaps = 127/966 (13%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            G+  H++IL      +  L+  L   Y   G L  A ++FD+MP+R + +WN ++   A 
Sbjct: 64   GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA- 122

Query: 132  SGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIG 189
                +   + E F LF R + E++T  +  T + +L+ C      +   E +H   L  G
Sbjct: 123  ----SRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 177

Query: 190  LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
            L     V   L+++YS+ G +  A+ +FDG++ +D   W  M+   ++N    E   LF 
Sbjct: 178  LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 237

Query: 250  DLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQAYAIKLLLYNN 293
            D++  G+ P   +   VL                G++  LG   +  V    + L  +  
Sbjct: 238  DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 297

Query: 294  N-------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
            N              + V +N  ++G  Q G    A+E F  M    ++ DS T    + 
Sbjct: 298  NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 357

Query: 341  AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------- 379
            A +    L  GQQ+H  T K GF S   +  +L+N+Y+K                     
Sbjct: 358  ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 417

Query: 380  ---MGCVCGLRTD-------------------QFTLASVLRASSSLPEGLHLSKQIHVHA 417
               M    GL  D                   Q+T  S+L+    L + L L +QIH   
Sbjct: 418  WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD-LELGEQIHSQI 476

Query: 418  IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            IK +   +++V + LID+Y + G +  A  +     G D+ +W  MI GY   N   KAL
Sbjct: 477  IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536

Query: 478  ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
              F  M   G R DE+ +  AV AC  L  LK+G+Q+HA A  SGF  DL   + ++ +Y
Sbjct: 537  TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596

Query: 538  VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
             +CG + ++   F    A D++AW  ++SG   +G  + AL ++ +M   G+  + FTF 
Sbjct: 597  SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 656

Query: 598  ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
              VKA+S    ++QG+Q+HA + K    S+  V  +L+ MYAKCG+I DA   F ++  +
Sbjct: 657  SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 716

Query: 658  NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
            N V WNA++   ++HG G E L  F+ M    V P+ VT +GVLSACS+ GLV +    F
Sbjct: 717  NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 776

Query: 718  HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
              M  +YG+ P+ EHY  +VD L RAG    A E I  MP +  A + R LL AC V  +
Sbjct: 777  ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 836

Query: 778  TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------ 831
             E G++ A  L+ LEP DS+ YVLLSN++A + +WD     R +MK K VKK+P      
Sbjct: 837  MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 896

Query: 832  -----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                             AD I    + L KR  E GYV D   +L +++ E+K+  ++ H
Sbjct: 897  VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 956

Query: 875  SEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDG 911
            SEKLA ++GL+S P +  I                     +SN+E +   A RFHH   G
Sbjct: 957  SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1016

Query: 912  MCPCAD 917
             C C D
Sbjct: 1017 ACSCKD 1022



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 179/671 (26%), Positives = 302/671 (45%), Gaps = 78/671 (11%)

Query: 161 TLAPLLKLCL-SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           TL  LL+ CL ++G +     +H   LK+GL  +  +S  L + Y   G +  A  +FD 
Sbjct: 46  TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 105

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDL 273
           M ER +  W  M++  A      EVF LFV +    + P++ +   VL       V  D+
Sbjct: 106 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 165

Query: 274 GKRHEEQVQAYAIK---------LLLYNNNSNVVL---------------WNKKLSGYLQ 309
            ++   ++    ++         + LY+ N  V L               W   +SG  +
Sbjct: 166 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 225

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 AI  F +M    +      F   L+A    ++L +G+Q+HG  LK GF S   V
Sbjct: 226 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 285

Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
            N+L+++Y  +G +                                            GL
Sbjct: 286 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 345

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             D  TLAS++ A S+    L   +Q+H +  K    +++ +  AL+++Y +   +  A 
Sbjct: 346 EPDSNTLASLVVACSA-DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 404

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
             F   +  ++  WN M+  Y L ++   +  +F  M       ++ T  + +K C  L 
Sbjct: 405 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 464

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L+ G+Q+H+  +K+ F+L+  V S ++DMY K G +  A  I       D V+WTTMI+
Sbjct: 465 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 524

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G      +D AL+ + QM   G+  DE      V A + L AL++G+QIHA       SS
Sbjct: 525 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 584

Query: 627 D-PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           D PF   +LV +Y++CG IE++Y+ F+Q +  + + WNA++ G  Q GN EE L++F  M
Sbjct: 585 DLPFQN-ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 643

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G++ ++ TF   + A S T  + +  +  H +  K G + E E  + L+    + G 
Sbjct: 644 NREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGS 702

Query: 746 TKEAGELILSM 756
             +A +  L +
Sbjct: 703 ISDAEKQFLEV 713



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 247/590 (41%), Gaps = 88/590 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L +G+  H  +L      D ++ N L+++Y   G+L+ A  +F  M  R
Sbjct: 253 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 312

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N+++   +  G G      +   LF+ +          TLA L+  C + G ++ 
Sbjct: 313 DAVTYNTLINGLSQCGYGE-----KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y  K+G   +  + GAL+N+Y+K   I  A   F   +  +VVLW VML AY  
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
                  F +F  +    + P+  +   +L     LG     EQ+ +  IK         
Sbjct: 428 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487

Query: 288 -------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                              +L+     +VV W   ++GY Q   +  A+  F  M+   +
Sbjct: 488 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 547

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
           + D V    A++A AG   L  GQQIH     SGF S +   N+L+ +YS+ G +     
Sbjct: 548 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 607

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G+  + FT  S ++A+S    
Sbjct: 608 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA- 666

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            +   KQ+H    K    +++ V  ALI +Y + GS+++AE  F      +  +WNA+I 
Sbjct: 667 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 726

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-YAMK 520
            Y       +AL+ F  M  S  R + +T+   + AC  + ++ +G    + M++ Y + 
Sbjct: 727 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 786

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
              E  +CV    +DM  + G +  A+    ++P  PD + W T++S CV
Sbjct: 787 PKPEHYVCV----VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 832



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 214/464 (46%), Gaps = 43/464 (9%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           +T ++ L   L+ + SL EG    +++H   +K    ++  +S  L D Y   G +  A 
Sbjct: 45  QTLKWLLEGCLKTNGSLDEG----RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCL 505
            +F+      + TWN MI      N   +   LF  M +     +E T +  ++AC G  
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 160

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +     +Q+HA  +  G      V + ++D+Y + G +  A+ +F+ +   D  +W  MI
Sbjct: 161 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 220

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           SG   N  E  A+ ++  M + G++P  + F+ ++ A   + +LE G Q+H  ++KL  S
Sbjct: 221 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 280

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           SD +V  +LV +Y   GN+  A  +F  M  R+ V +N ++ GL+Q G GE+ ++LF+ M
Sbjct: 281 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 340

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG-------------------- 725
              G+EPDS T   ++ ACS  G +    +  H    K G                    
Sbjct: 341 HLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399

Query: 726 --------IEPEVEH---YSFLVDALGRAGRTKEAGELILSMPFE---ASASMHRALLGA 771
                   +E EVE+   ++ ++ A G     + +  +   M  E    +   + ++L  
Sbjct: 400 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYV--LLSNIFAAANQWD 813
           C   GD E G+ +  +++    F  +AYV  +L +++A   + D
Sbjct: 460 CIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLD 502



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)

Query: 588 GVVPDEFTFAILVKASSCLT---ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           G+ P+  T   L++   CL    +L++GR++H+ ++KL   S+  +   L D Y   G++
Sbjct: 39  GIRPNHQTLKWLLEG--CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 96

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             A+ +F +M  R    WN M+  LA      E   LF  M +  V P+  TF GVL AC
Sbjct: 97  YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 156

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
               +  +  E  H      G+       + L+D   R G
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 196



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 27/230 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S ++ A  T+++  GK  HA I  +    +  + N L++MY++CGS+  A + F ++  +
Sbjct: 657 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 716

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
           + +SWN+I+ AY+  G G     +E    F  +  S    + +TL  +L  C   G    
Sbjct: 717 NEVSWNAIINAYSKHGFG-----SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDK 771

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWK 229
              Y  +  + +G + K     + +V   +V++ ++ G +  AK     M  + D ++W+
Sbjct: 772 GIAYFESMNSEYGLSPKP----EHYV--CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 825

Query: 230 VMLRA---YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
            +L A   +     GE   H  ++L      P+D +   +L  +  + K+
Sbjct: 826 TLLSACVVHKNMEIGEFAAHHLLELE-----PEDSATYVLLSNLYAVSKK 870


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 271/807 (33%), Positives = 413/807 (51%), Gaps = 124/807 (15%)

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           VN+YSK    R A+ L     E D+V W  ++  Y +NG GEE    + +++  G   ++
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 261 ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
            +   VL   S                                L+  L++G     +   
Sbjct: 149 FTFSSVLKGCS--------------------------------LTRNLELGKQIHRVALV 176

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             MI + +  +  +    L A AG ++ N G ++HG  +K G+ S     N+L++MY+K 
Sbjct: 177 TEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKS 236

Query: 381 GCV------------------------CGLR-------------------TDQFTLASVL 397
           GC                         C L                       FTL+S L
Sbjct: 237 GCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSAL 296

Query: 398 RASSSLPEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           +A +++  GL  L +Q+H   +K D   DSFV   LID+Y + G + +A  +F+     D
Sbjct: 297 KACAAI--GLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKD 354

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN++I GY       +A+ LF++M+  G   ++ T++T +K+          +Q+H 
Sbjct: 355 VIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHT 414

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            ++KSG++ D  V++ +LD Y KC  + DA  +F   PA D VA+T+MI+     G  + 
Sbjct: 415 ISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEE 474

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL +Y +M+   + PD F F+ L  A + L+A EQG+QIH +++K    SD F G SLV+
Sbjct: 475 ALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVN 534

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCG+I+DA  +F ++  R  V W+AM+ GLAQHG+G + L+LF  M  +G+ P+ +T
Sbjct: 535 MYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHIT 594

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            + VLSAC++ GLV+EA   F LM + +GI P  EHY+ +VD LGR GR  EA  L+  M
Sbjct: 595 LVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVT 816
           PF+ASA++  ALLGA R+  + E G+  AE L+ LEP  S  ++LL+NI+A+   WD+V 
Sbjct: 655 PFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVA 714

Query: 817 SARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVP 853
             R  MK   VKK+P                       +  I+ K++ L +R+   GYVP
Sbjct: 715 KVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVP 774

Query: 854 DTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------------- 893
             +  L DVE+ EKE+ L++HSEKLA A+GLI+TPP + I                    
Sbjct: 775 MIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFIS 834

Query: 894 -LSNKEPLY--ANRFHHLRDGMCPCAD 917
            ++++E +    NRFHH RDG C C D
Sbjct: 835 KVASREIIVRDINRFHHFRDGSCSCGD 861



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 122/552 (22%), Positives = 223/552 (40%), Gaps = 113/552 (20%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L    ++ D+  G + HARI+    +  R    NL   YS+C     AR+L     + D
Sbjct: 56  LLLQFTASKDVSSGMAIHARIIRLGLLGLRNRLVNL---YSKCQCFRVARKLVIDSSEPD 112

Query: 119 LISWNSILAAYAHSGEGNA--------------------ENVTEGFRLFRSLR------- 151
           L+SW+++++ Y  +G G                       +V +G  L R+L        
Sbjct: 113 LVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHR 172

Query: 152 -----ESITF---TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
                E I+     +  +L+ +L  C           VHGY +K+G   D F + AL+++
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y+K G    A  +F  + + D+V W  ++     +   +    L   +    + P   ++
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292

Query: 264 QCVLGVISDLG-KRHEEQVQAYAIKLLLYNNN---------------------------- 294
              L   + +G  +   Q+ +  +K+ +  ++                            
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            +V++WN  +SGY   G +  A+  F NM +  ++++  T    L + AG+      +Q+
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGC----------VC-------------------- 384
           H  ++KSG+     V NSL++ Y K  C          VC                    
Sbjct: 413 HTISIKSGYQYDGYVANSLLDSYGKC-CLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL 471

Query: 385 --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                          ++ D F  +S+  A ++L       KQIHVH +K   ++D F   
Sbjct: 472 GEEALKMYLRMQDRDIKPDAFIFSSLFNACANL-SAYEQGKQIHVHVLKCGLLSDVFAGN 530

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +L+++Y + GS+ +A  +F       + +W+AMI G     +  KAL+LF  M  +G   
Sbjct: 531 SLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILP 590

Query: 491 DEITIATAVKAC 502
           + IT+ + + AC
Sbjct: 591 NHITLVSVLSAC 602



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 38/357 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L       D   G   H  ++      D F  N L+ MY++ G    A  +F ++P  
Sbjct: 193 TVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKP 252

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWN+++A     G    E      +L   +       S  TL+  LK C + G V  
Sbjct: 253 DIVSWNAVIA-----GCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKL 307

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +K+ +  D FV   L+++YSK G +++A+ +FD M  +DV++W  ++  Y+ 
Sbjct: 308 GRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSN 367

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---EQVQAYAIKLLL---- 290
            G+  E   LF ++++ GL  +  ++  +L   S  G +     EQV   +IK       
Sbjct: 368 CGYDIEAMSLFTNMYKEGLEFNQTTLSTILK--STAGSQANGFCEQVHTISIKSGYQYDG 425

Query: 291 YNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           Y  NS                        ++V +   ++ Y Q G    A++ ++ M   
Sbjct: 426 YVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDR 485

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +++ D+  F     A A       G+QIH   LK G  S V  GNSL+NMY+K G +
Sbjct: 486 DIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSI 542



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 5/202 (2%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  H   + S    D ++ N+L+  Y +C  L  A ++F+  P  DL+++ S++ AY+  
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G G      E  +++  +++          + L   C +       + +H + LK GL+ 
Sbjct: 470 GLGE-----EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS 524

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D F   +LVN+Y+K G I +A  +F+ +  R +V W  M+   A++G G +   LF  + 
Sbjct: 525 DVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQML 584

Query: 253 RSGLCPDDESVQCVLGVISDLG 274
           ++G+ P+  ++  VL   +  G
Sbjct: 585 KNGILPNHITLVSVLSACNHAG 606


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 277/852 (32%), Positives = 428/852 (50%), Gaps = 94/852 (11%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           + ++ + LL  C ++  +     +H +  K GL  D  +   L+N+YSK      A+ L 
Sbjct: 55  TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLV 114

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLG 274
           D   E D+V W  ++  YA+NG G      F ++H  G+  ++ +   VL    ++ DL 
Sbjct: 115 DESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL- 173

Query: 275 KRHEEQVQAYAI----------------------------KLLLYNNNSNVVLWNKKLSG 306
            R  +QV    +                            +L       NVV WN   S 
Sbjct: 174 -RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y+Q      A+  F  M+ S ++ +  +    + A  G  + + G+ IHG  +K G+   
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292

Query: 367 VIVGNSLINMYSKMGCVCG-------LRTDQFTLASVLRASSSLPEGL--------HLSK 411
               N+L++MY+K+G +         ++       + + A   L E           + +
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H   +K D  +D FVS  L+D+Y +   + +A   F      DL  WNA+I GY    
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 412

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +AL LF  MH  G   ++ T++T +K+   L ++   +Q+H  ++KSGF  D+ V +
Sbjct: 413 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++D Y KC  + DA+ IF +    D V++T+MI+     G+ + AL ++ +M+   + P
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 532

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D F  + L+ A + L+A EQG+Q+H +++K     D F G SLV+MYAKCG+I+DA   F
Sbjct: 533 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 592

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            ++  R  V W+AM+ GLAQHG+G + L+LF  M   GV P+ +T + VL AC++ GLV+
Sbjct: 593 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 652

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           EA   F  M E +G +P  EHY+ ++D LGRAG+  EA EL+  MPFEA+AS+  ALLGA
Sbjct: 653 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
            R+  D E G+  AE L  LEP  S  +VLL+NI+A+A +W++V   R  M+   VKK+P
Sbjct: 713 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 772

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  +  I+AK++ L   + + GYVP  +  L DVE+ EKE
Sbjct: 773 GMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKE 832

Query: 869 RALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRF 905
             LY+HSEKLA A+GLI+TP  + I   K                            NRF
Sbjct: 833 LLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRF 892

Query: 906 HHLRDGMCPCAD 917
           HH +DG C C D
Sbjct: 893 HHFKDGSCSCGD 904



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 185/727 (25%), Positives = 331/727 (45%), Gaps = 77/727 (10%)

Query: 10  KPRHKHTYVIFSSFTKDTYRNLPSFS-----LSLLPFLQKSHFSSSSSSSQWFSILRHAI 64
           KP H+  ++ F    K   + +P FS      ++L  + K +F+ +S S  +  +L    
Sbjct: 11  KPLHQRLHLPFKPAPK-LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVS--YSKLLSQCC 67

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           +T  L  G   HA I  S    D  + N+L+ +YS+C    YAR+L D+  + DL+SW++
Sbjct: 68  TTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSA 127

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +++ YA +G G           F  +       +  T + +LK C     +   + VHG 
Sbjct: 128 LISGYAQNGLGGG-----ALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGV 182

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +  G   D FV+  LV +Y+K  +  ++K LFD + ER+VV W  +   Y +  F  E 
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEA 242

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLLYNNNSNVVLWNKK 303
             LF ++  SG+ P++ S+  ++   + L      + +  Y IKL     + +    N  
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL---GYDWDPFSANAL 299

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN-----LGQ---QIH 355
           +  Y +VGD   AI  F  +     Q D V++   +A     ++       LGQ   Q+H
Sbjct: 300 VDMYAKVGDLADAISVFEKI----KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLH 355

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
            + +K    S + V   L++MYSK   +                                
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G+  +Q TL+++L++++ L + +H+ +Q+H  ++K+   +D +V  +L
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGL-QVVHVCRQVHGLSVKSGFHSDIYVVNSL 474

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID Y +   + +AE +FE     DL ++ +MI  Y       +AL+LF  M     + D 
Sbjct: 475 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
              ++ + AC  L   +QGKQ+H + +K GF LD+   + +++MY KCG++ DA   F++
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 594

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +     V+W+ MI G   +G    AL +++QM   GV P+  T   ++ A +    + + 
Sbjct: 595 LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 654

Query: 613 RQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGL 669
           +    ++ +L     P       ++D+  + G I +A  L  +M    N  +W A+L   
Sbjct: 655 KLYFESMEEL-FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAA 713

Query: 670 AQHGNGE 676
             H + E
Sbjct: 714 RIHKDVE 720



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A  +   +P   +   TT I   +D G                  P   +++ L+     
Sbjct: 24  APKLIQTVPQFSEDPQTTAILNLIDKG---------------NFTPTSVSYSKLLSQCCT 68

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
             +L  G QIHA++ K   S DP +   L+++Y+KC     A  L  +    + V W+A+
Sbjct: 69  TKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSAL 128

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           + G AQ+G G   L  F +M   GV+ +  TF  VL ACS
Sbjct: 129 ISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 273/853 (32%), Positives = 417/853 (48%), Gaps = 104/853 (12%)

Query: 160 LTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           L  A  L+ C  +G  W     +H  A+  GL     V   L+++YSK G +  A+ +F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG---------- 268
            +  RD V W  ML  YA+NG GEE   L+  +HR+G+ P    +  VL           
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161

Query: 269 --VISDLGKRH----EEQVQAYAIKLLLYNN-------------NSNVVLWNKKLSGYLQ 309
             +I   G +H    E  V    I L L                + + V +N  +SG+ Q
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A+E F  M  S +  D VT    LAA A   +L  G Q+H    K+G  S  I+
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281

Query: 370 GNSLINMYSKMGCV-------------------------------------------CGL 386
             SL+++Y K G V                                            G+
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R +QFT   +LR  +   E + L +QIH  ++K    +D +VS  LID+Y + G + +A 
Sbjct: 342 RPNQFTYPCILRTCTCTRE-IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            + E     D+ +W +MI GY+       AL  F  M   G   D I +A+A+  C  + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++QG Q+HA    SG+  D+ + + ++++Y +CG + +A S F +I   D++ W  ++S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G  + AL ++ +M  SGV  + FTF   + AS+ L  ++QG+QIHA +IK   S 
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           +  VG +L+ +Y KCG+ EDA + F +M  RN V WN ++   +QHG G E L LF+ MK
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G++P+ VTFIGVL+ACS+ GLV E    F  M ++YGI P  +HY+ ++D  GRAG+ 
Sbjct: 641 KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
             A + I  MP  A A + R LL AC+V  + E G++ A+ L+ LEP DS++YVLLSN +
Sbjct: 701 DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760

Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
           A   +W +    R  M+ + V+K+P                       A+ I+  +  + 
Sbjct: 761 AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------SSVILSN 896
            R+ + GY  +   +  D E+E ++     HSEKLA  +GL+S PP        ++ +  
Sbjct: 821 DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRVEK 880

Query: 897 KEPLYANRFHHLR 909
              LYAN  H  R
Sbjct: 881 YTSLYANFLHQKR 893



 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 184/734 (25%), Positives = 341/734 (46%), Gaps = 94/734 (12%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA+ +       R + N L+ +YS+ G ++ ARR+F+++  RD +SW ++L+ YA +G G
Sbjct: 65  HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E   L+R +  +    +   L+ +L  C  +        +H    K G   + F
Sbjct: 125 E-----EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  A++ +Y + G  R A+ +F  M  RD V +  ++  +A+ G GE    +F ++  SG
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------------------------L 288
           L PD  ++  +L   + LG   +  Q+ +Y  K                          L
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 289 LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           +++N  + +NVVLWN  L  + Q+ D   + E F  M  + ++ +  T+   L     T 
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
            ++LG+QIH  ++K+GF S + V   LI+MYSK G +                       
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 384 --------------------CGLRTDQFTLASVLRASS---SLPEGLHLSKQIHVHAIKN 420
                               CG+  D   LAS +   +   ++ +GL +  +I+V     
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           D      +  AL+++Y R G + EA   FE  +  D  TWN ++ G+  S    +AL++F
Sbjct: 480 DVS----IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M  SG + +  T  +A+ A   L  +KQGKQ+HA  +K+G   +  V + ++ +Y KC
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G+  DA+  F+++   ++V+W T+I+ C  +G    AL ++ QM+  G+ P++ TF  ++
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655

Query: 601 KASSCLTALEQGRQIHANLI-KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RN 658
            A S +  +E+G     ++  +      P     ++D++ + G ++ A    ++M +  +
Sbjct: 656 AACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD 715

Query: 659 TVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++W  +L     H N   GE   K   +++ H    DS +++ + +A + T   +   +
Sbjct: 716 AMVWRTLLSACKVHKNIEVGEFAAKHLLELEPH----DSASYVLLSNAYAVTEKWANRDQ 771

Query: 716 NFHLMREKYGIEPE 729
              +MR++ G+  E
Sbjct: 772 VRKMMRDR-GVRKE 784



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 165/721 (22%), Positives = 303/721 (42%), Gaps = 108/721 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L           G+  HA+        + F+ N ++T+Y RCGS   A R+F  MP R
Sbjct: 148 SVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N++++ +A  G G          +F  ++ S      +T++ LL  C S G +  
Sbjct: 208 DTVTFNTLISGHAQCGHGE-----HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H Y  K G+  D  + G+L+++Y K G +  A  +F+     +VVLW +ML A+ +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK----- 287
                + F LF  +  +G+ P+  +  C+L   +     DLG    EQ+ + ++K     
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG----EQIHSLSVKTGFES 378

Query: 288 -----------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                  +L      +VV W   ++GY+Q      A+  F  M 
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           +  +  D++    A++  AG + +  G QIH     SG+   V + N+L+N+Y++ G + 
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIR 498

Query: 384 ------------------------------------------CGLRTDQFTLASVLRASS 401
                                                      G++ + FT  S L AS+
Sbjct: 499 EAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           +L E +   KQIH   IK     ++ V  ALI +Y + GS  +A+  F      +  +WN
Sbjct: 559 NLAE-IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMH-A 516
            +I          +AL+LF  M   G + +++T    + AC  + ++++G    K M   
Sbjct: 618 TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDE 677

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-VDNGEE 574
           Y ++   +   CV    +D++ + G +  A+    ++P A D + W T++S C V    E
Sbjct: 678 YGIRPRPDHYACV----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
               +  H + L     D  ++ +L  A +         Q+   +       +P  G S 
Sbjct: 734 VGEFAAKHLLELE--PHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEP--GRSW 789

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV---GLAQHGNGEETLKLFEDMKAHGVE 691
           +++     N+  A+ +  ++      ++N + V    +A+ G  +E   LF D +  G +
Sbjct: 790 IEV----KNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRD 845

Query: 692 P 692
           P
Sbjct: 846 P 846



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 137/252 (54%), Gaps = 1/252 (0%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHA 516
           A+    + G++   +  K L LF+        L  +  A A++AC G     +   ++HA
Sbjct: 7   ASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHA 66

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+  G      V + ++D+Y K G ++ A+ +F ++ A D+V+W  M+SG   NG  + 
Sbjct: 67  KAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEE 126

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL +Y QM  +GVVP  +  + ++ + +      QGR IHA   K    S+ FVG +++ 
Sbjct: 127 ALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVIT 186

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y +CG+   A  +F  M  R+TV +N ++ G AQ G+GE  L++FE+M+  G+ PD VT
Sbjct: 187 LYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVT 246

Query: 697 FIGVLSACSYTG 708
              +L+AC+  G
Sbjct: 247 ISSLLAACASLG 258


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 273/853 (32%), Positives = 417/853 (48%), Gaps = 104/853 (12%)

Query: 160 LTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           L  A  L+ C  +G  W     +H  A+  GL     V   L+++YSK G +  A+ +F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG---------- 268
            +  RD V W  ML  YA+NG GEE   L+  +HR+G+ P    +  VL           
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161

Query: 269 --VISDLGKRH----EEQVQAYAIKLLLYNN-------------NSNVVLWNKKLSGYLQ 309
             +I   G +H    E  V    I L L                + + V +N  +SG+ Q
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A+E F  M  S +  D VT    LAA A   +L  G Q+H    K+G  S  I+
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281

Query: 370 GNSLINMYSKMGCV-------------------------------------------CGL 386
             SL+++Y K G V                                            G+
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R +QFT   +LR  +   E + L +QIH  ++K    +D +VS  LID+Y + G + +A 
Sbjct: 342 RPNQFTYPCILRTCTCTRE-IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            + E     D+ +W +MI GY+       AL  F  M   G   D I +A+A+  C  + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++QG Q+HA    SG+  D+ + + ++++Y +CG + +A S F +I   D++ W  ++S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G  + AL ++ +M  SGV  + FTF   + AS+ L  ++QG+QIHA +IK   S 
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           +  VG +L+ +Y KCG+ EDA + F +M  RN V WN ++   +QHG G E L LF+ MK
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G++P+ VTFIGVL+ACS+ GLV E    F  M ++YGI P  +HY+ ++D  GRAG+ 
Sbjct: 641 KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
             A + I  MP  A A + R LL AC+V  + E G++ A+ L+ LEP DS++YVLLSN +
Sbjct: 701 DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760

Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
           A   +W +    R  M+ + V+K+P                       A+ I+  +  + 
Sbjct: 761 AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------SSVILSN 896
            R+ + GY  +   +  D E+E ++     HSEKLA  +GL+S PP        ++ +  
Sbjct: 821 DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRVEK 880

Query: 897 KEPLYANRFHHLR 909
              LYAN  H  R
Sbjct: 881 YTSLYANFLHQKR 893



 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 184/734 (25%), Positives = 341/734 (46%), Gaps = 94/734 (12%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA+ +       R + N L+ +YS+ G ++ ARR+F+++  RD +SW ++L+ YA +G G
Sbjct: 65  HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E   L+R +  +    +   L+ +L  C  +        +H    K G   + F
Sbjct: 125 E-----EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  A++ +Y + G  R A+ +F  M  RD V +  ++  +A+ G GE    +F ++  SG
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------------------------L 288
           L PD  ++  +L   + LG   +  Q+ +Y  K                          L
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 289 LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           +++N  + +NVVLWN  L  + Q+ D   + E F  M  + ++ +  T+   L     T 
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
            ++LG+QIH  ++K+GF S + V   LI+MYSK G +                       
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 384 --------------------CGLRTDQFTLASVLRASS---SLPEGLHLSKQIHVHAIKN 420
                               CG+  D   LAS +   +   ++ +GL +  +I+V     
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           D      +  AL+++Y R G + EA   FE  +  D  TWN ++ G+  S    +AL++F
Sbjct: 480 DVS----IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M  SG + +  T  +A+ A   L  +KQGKQ+HA  +K+G   +  V + ++ +Y KC
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G+  DA+  F+++   ++V+W T+I+ C  +G    AL ++ QM+  G+ P++ TF  ++
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655

Query: 601 KASSCLTALEQGRQIHANLI-KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RN 658
            A S +  +E+G     ++  +      P     ++D++ + G ++ A    ++M +  +
Sbjct: 656 AACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD 715

Query: 659 TVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++W  +L     H N   GE   K   +++ H    DS +++ + +A + T   +   +
Sbjct: 716 AMVWRTLLSACKVHKNIEVGEFAAKHLLELEPH----DSASYVLLSNAYAVTEKWANRDQ 771

Query: 716 NFHLMREKYGIEPE 729
              +MR++ G+  E
Sbjct: 772 VRKMMRDR-GVRKE 784



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 165/721 (22%), Positives = 303/721 (42%), Gaps = 108/721 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L           G+  HA+        + F+ N ++T+Y RCGS   A R+F  MP R
Sbjct: 148 SVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N++++ +A  G G          +F  ++ S      +T++ LL  C S G +  
Sbjct: 208 DTVTFNTLISGHAQCGHGE-----HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H Y  K G+  D  + G+L+++Y K G +  A  +F+     +VVLW +ML A+ +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK----- 287
                + F LF  +  +G+ P+  +  C+L   +     DLG    EQ+ + ++K     
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG----EQIHSLSVKTGFES 378

Query: 288 -----------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                  +L      +VV W   ++GY+Q      A+  F  M 
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           +  +  D++    A++  AG + +  G QIH     SG+   V + N+L+N+Y++ G + 
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIR 498

Query: 384 ------------------------------------------CGLRTDQFTLASVLRASS 401
                                                      G++ + FT  S L AS+
Sbjct: 499 EAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           +L E +   KQIH   IK     ++ V  ALI +Y + GS  +A+  F      +  +WN
Sbjct: 559 NLAE-IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMH-A 516
            +I          +AL+LF  M   G + +++T    + AC  + ++++G    K M   
Sbjct: 618 TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDE 677

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-VDNGEE 574
           Y ++   +   CV    +D++ + G +  A+    ++P A D + W T++S C V    E
Sbjct: 678 YGIRPRPDHYACV----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
               +  H + L     D  ++ +L  A +         Q+   +       +P  G S 
Sbjct: 734 VGEFAAKHLLELE--PHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEP--GRSW 789

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV---GLAQHGNGEETLKLFEDMKAHGVE 691
           +++     N+  A+ +  ++      ++N + V    +A+ G  +E   LF D +  G +
Sbjct: 790 IEV----KNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRD 845

Query: 692 P 692
           P
Sbjct: 846 P 846



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 137/252 (54%), Gaps = 1/252 (0%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHA 516
           A+    + G++   +  K L LF+        L  +  A A++AC G     +   ++HA
Sbjct: 7   ASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHA 66

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+  G      V + ++D+Y K G ++ A+ +F ++ A D+V+W  M+SG   NG  + 
Sbjct: 67  KAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEE 126

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL +Y QM  +GVVP  +  + ++ + +      QGR IHA   K    S+ FVG +++ 
Sbjct: 127 ALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVIT 186

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y +CG+   A  +F  M  R+TV +N ++ G AQ G+GE  L++FE+M+  G+ PD VT
Sbjct: 187 LYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVT 246

Query: 697 FIGVLSACSYTG 708
              +L+AC+  G
Sbjct: 247 ISSLLAACASLG 258


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 275/836 (32%), Positives = 411/836 (49%), Gaps = 121/836 (14%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L++ YSK  +   A+ +FD + +   V W  ++ AY+ NG        F  +   G+C +
Sbjct: 43  LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIK-------------LLLY--------------- 291
           + ++  VL  + D   R   QV A A+              + +Y               
Sbjct: 103 EFALPVVLKCVPD--ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160

Query: 292 -NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            ++  N V WN  +S Y++      AI+ F  M+ S +Q     F   + A  G+ N+  
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CV- 383
           G+Q+H   ++ G+   V   N+L++MY KMG                          CV 
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            GL  + FTL+S+L+A S       L +QIH   IK +  +D +
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG-AGAFDLGRQIHGFMIKANADSDDY 339

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +   L+D+Y +N  + +A  +F+     DL   NA+I G        +AL LF  +   G
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
             ++  T+A  +K+   L      +Q+HA A+K GF  D  V +G++D Y KC  + DA 
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F +  + D +A T+MI+        + A+ ++ +M   G+ PD F  + L+ A + L+
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A EQG+Q+HA+LIK    SD F G +LV  YAKCG+IEDA + F  +  R  V W+AM+ 
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GLAQHG+G+  L+LF  M   G+ P+ +T   VL AC++ GLV EA   F+ M+E +GI+
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
              EHYS ++D LGRAG+  +A EL+ SMPF+A+AS+  ALLGA RV  D E GK  AEK
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEK 699

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           L  LEP  S  +VLL+N +A+A  W++V   R  MK  N+KK+PA               
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                     I+AK+  L   + + G+VP+ D  L D++  EKE  L +HSE+LA A+ L
Sbjct: 760 GDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819

Query: 885 ISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCAD 917
           +STPP + I   K                            NRFHH RDG C C D
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGD 875



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 240/566 (42%), Gaps = 90/566 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDRDLISWNSIL 126
           D  LG   HA  + +    D F+ N L+ MY   G +  ARR+F++   +R+ +SWN ++
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           +AY  +     +   +  ++F  +  S    +    + ++  C  S  + A   VH   +
Sbjct: 175 SAYVKN-----DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVV 229

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           ++G   D F + ALV++Y K G++  A  +F+ M + DVV W  ++     NG       
Sbjct: 230 RMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 247 LFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK-------------L 288
           L + +  SGL P+  ++  +L   S     DLG+    Q+  + IK             +
Sbjct: 290 LLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGR----QIHGFMIKANADSDDYIGVGLV 345

Query: 289 LLYNNN---------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y  N                +++L N  +SG    G +  A+  F  + +  +  +  
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------- 384
           T    L + A  +  +  +Q+H   +K GF     V N LI+ Y K  C+          
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC 465

Query: 385 ----------------------------------GLRTDQFTLASVLRASSSLPEGLHLS 410
                                             GL  D F L+S+L A +SL       
Sbjct: 466 SSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL-SAYEQG 524

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQ+H H IK   ++D+F   AL+  Y + GS+ +AE  F +     + +W+AMI G    
Sbjct: 525 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQH 584

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  +ALELF  M   G   + IT+ + + AC    ++ + K+ +  +MK  F +D    
Sbjct: 585 GHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEE 643

Query: 531 --SGILDMYVKCGAMVDAQSIFNDIP 554
             S ++D+  + G + DA  + N +P
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMP 669



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 136/313 (43%), Gaps = 34/313 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+         LG+  H  ++ ++   D ++   L+ MY++   L  AR++FD M  R
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DLI  N++++  +H G  +     E   LF  LR+     +R TLA +LK   S      
Sbjct: 368 DLILCNALISGCSHGGRHD-----EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAST 422

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH  A+KIG ++D  V   L++ Y K   + +A  +F+     D++    M+ A ++
Sbjct: 423 TRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQ 482

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------- 287
              GE    LF+++ R GL PD   +  +L   + L    + +QV A+ IK         
Sbjct: 483 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 542

Query: 288 --LLLYN-----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
              L+Y                      VV W+  + G  Q G    A+E F  M+   +
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 602

Query: 329 QYDSVTFLVALAA 341
             + +T    L A
Sbjct: 603 NPNHITMTSVLCA 615



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  HA ++    + D F  N L+  Y++CGS+  A   F  +P+R
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++SW++++   A  G G          LF  + +     + +T+  +L  C  +G V  
Sbjct: 570 GVVSWSAMIGGLAQHGHGK-----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           A    +      G+   E     ++++  + GK+ +A  L + M  + +  +W  +L A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 275/836 (32%), Positives = 410/836 (49%), Gaps = 121/836 (14%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L++ YSK  +   A+  FD + +   V W  ++ AY+ NG        F  +   G+C +
Sbjct: 43  LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIK-------------LLLY--------------- 291
           + ++  VL  + D   R   QV A A+              + +Y               
Sbjct: 103 EFALPVVLKCVPD--ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160

Query: 292 -NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            ++  N V WN  +S Y++      AI+ F  M+ S +Q     F   + A  G+ N+  
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CV- 383
           G+Q+H   ++ G+   V   N+L++MY KMG                          CV 
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            GL  + FTL+S+L+A S       L +QIH   IK +  +D +
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG-AGAFDLGRQIHGFMIKANADSDDY 339

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +   L+D+Y +N  + +A  +F+     DL   NA+I G        +AL LF  +   G
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
             ++  T+A  +K+   L      +Q+HA A+K GF  D  V +G++D Y KC  + DA 
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F +  + D +A T+MI+        + A+ ++ +M   G+ PD F  + L+ A + L+
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A EQG+Q+HA+LIK    SD F G +LV  YAKCG+IEDA + F  +  R  V W+AM+ 
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GLAQHG+G+  L+LF  M   G+ P+ +T   VL AC++ GLV EA   F+ M+E +GI+
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
              EHYS ++D LGRAG+  +A EL+ SMPF+A+AS+  ALLGA RV  D E GK  AEK
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEK 699

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           L  LEP  S  +VLL+N +A+A  W++V   R  MK  N+KK+PA               
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                     I+AK+  L   + + G+VP+ D  L D++  EKE  L +HSE+LA A+ L
Sbjct: 760 GDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819

Query: 885 ISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCAD 917
           +STPP + I   K                            NRFHH RDG C C D
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGD 875



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 240/566 (42%), Gaps = 90/566 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDRDLISWNSIL 126
           D  LG   HA  + +    D F+ N L+ MY   G +  ARR+F++   +R+ +SWN ++
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           +AY  +     +   +  ++F  +  S    +    + ++  C  S  + A   VH   +
Sbjct: 175 SAYVKN-----DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVV 229

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           ++G   D F + ALV++Y K G++  A  +F+ M + DVV W  ++     NG       
Sbjct: 230 RMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 247 LFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK-------------L 288
           L + +  SGL P+  ++  +L   S     DLG+    Q+  + IK             +
Sbjct: 290 LLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGR----QIHGFMIKANADSDDYIGVGLV 345

Query: 289 LLYNNN---------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y  N                +++L N  +SG    G +  A+  F  + +  +  +  
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------- 384
           T    L + A  +  +  +Q+H   +K GF     V N LI+ Y K  C+          
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC 465

Query: 385 ----------------------------------GLRTDQFTLASVLRASSSLPEGLHLS 410
                                             GL  D F L+S+L A +SL       
Sbjct: 466 SSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL-SAYEQG 524

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQ+H H IK   ++D+F   AL+  Y + GS+ +AE  F +     + +W+AMI G    
Sbjct: 525 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQH 584

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  +ALELF  M   G   + IT+ + + AC    ++ + K+ +  +MK  F +D    
Sbjct: 585 GHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEE 643

Query: 531 --SGILDMYVKCGAMVDAQSIFNDIP 554
             S ++D+  + G + DA  + N +P
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMP 669



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 136/313 (43%), Gaps = 34/313 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+         LG+  H  ++ ++   D ++   L+ MY++   L  AR++FD M  R
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DLI  N++++  +H G  +     E   LF  LR+     +R TLA +LK   S      
Sbjct: 368 DLILCNALISGCSHGGRHD-----EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAST 422

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH  A+KIG ++D  V   L++ Y K   + +A  +F+     D++    M+ A ++
Sbjct: 423 TRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQ 482

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------- 287
              GE    LF+++ R GL PD   +  +L   + L    + +QV A+ IK         
Sbjct: 483 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 542

Query: 288 --LLLYN-----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
              L+Y                      VV W+  + G  Q G    A+E F  M+   +
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 602

Query: 329 QYDSVTFLVALAA 341
             + +T    L A
Sbjct: 603 NPNHITMTSVLCA 615



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  HA ++    + D F  N L+  Y++CGS+  A   F  +P+R
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++SW++++   A  G G          LF  + +     + +T+  +L  C  +G V  
Sbjct: 570 GVVSWSAMIGGLAQHGHGK-----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           A    +      G+   E     ++++  + GK+ +A  L + M  + +  +W  +L A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 255/714 (35%), Positives = 390/714 (54%), Gaps = 92/714 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHG-AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           + +VV WN   S Y+   D HG A+  F +M+ S ++ +  +    +    G ++   G+
Sbjct: 73  DRSVVSWNALFSCYVH-SDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CV--- 383
           +IHG  +K G+ S     N+L++MY+K+G                          CV   
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                          G+  + FTL+S L+A + +     L +Q+H   IK D  +DSF+ 
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKACAGMAL-RELGRQLHSSLIKMDMGSDSFLG 250

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             LID+Y +  SM +A  +F+     D+  WNA+I G+  +    +A  LF  MHT G  
Sbjct: 251 VGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIG 310

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            ++ T++T +K+   L      +Q+HA ++KSGFE D  V + ++D Y KCG + DA  +
Sbjct: 311 FNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRV 370

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F + P  D V +T++++    +G+ + AL +Y +M+  G+ PD F  + L+ A + L+A 
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAY 430

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           EQG+Q+H +++K    SD F G SLV+MYAKCG+IEDA   F ++ +R  V W+AM+ GL
Sbjct: 431 EQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGL 490

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQHG G+E L+LF+ M   GV P+ +T + VL AC++ GLV+EA   F+ M+  +GIEP 
Sbjct: 491 AQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPM 550

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            EHY+ ++D LGRAG+ + A EL+  MPF+A+A +  ALLGA R+  + + G+  AE L+
Sbjct: 551 QEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLL 610

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
           ALEP  S  +VLL+NI+A+   WD V   R  MK   VKK+P                  
Sbjct: 611 ALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGD 670

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                +  I+AK++ L   +K+ GYVP  +  L DVE  EKE+ LY+HSEKLA A+GLI+
Sbjct: 671 RSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIA 730

Query: 887 TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           TPP + I                     + ++E +    NRFHH R+G C C +
Sbjct: 731 TPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGE 784



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 251/492 (51%), Gaps = 46/492 (9%)

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------ 381
           ++ +   F   L A   T +L LG+Q+HG  + +GF S   V NSL+ +Y+K G      
Sbjct: 6   IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65

Query: 382 -------------------------------------CVCGLRTDQFTLASVLRASSSLP 404
                                                 + G+R ++F+L+S++   + L 
Sbjct: 66  SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + +   ++IH + IK    +D+F + AL+D+Y + G + +A  +F+     D+ +WNA+I
Sbjct: 126 DSVQ-GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            G +L    H+ALEL   M+ SG   +  T+++A+KAC  + + + G+Q+H+  +K    
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D  +  G++DMY KC +M DA+ +F  +P  D +AW  +ISG   N E++ A S++  M
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
              G+  ++ T + ++K+ + L A    RQIHA  +K     D +V  SL+D Y KCG++
Sbjct: 305 HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHV 364

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           EDA  +F++  + + VL+ +++   AQ G GEE L+L+ +M+  G++PDS     +L+AC
Sbjct: 365 EDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNAC 424

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           +      E  +  H+   K+G   ++   + LV+   + G  ++A      +P     S 
Sbjct: 425 ASLS-AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSW 483

Query: 765 HRALLGACRVQG 776
             A++G     G
Sbjct: 484 -SAMIGGLAQHG 494



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 208/374 (55%), Gaps = 2/374 (0%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G++ ++F   SVL+A + + + L L KQ+H   +     +D FV+ +L+ +Y + G   +
Sbjct: 5   GIKCNEFAFPSVLKACT-VTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+      + +WNA+   Y+ S+   +A+ LF  M  SG R +E ++++ +  C  
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L    QG+++H Y +K G++ D   ++ ++DMY K G + DA S+F++I  PD V+W  +
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+GCV +     AL +  +M  SG+ P+ FT +  +KA + +   E GRQ+H++LIK+D 
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            SD F+G+ L+DMY+KC +++DA ++FK M  R+ + WNA++ G +Q+   EE   LF  
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G+  +  T   VL + +     +      H +  K G E +    + L+D  G+ G
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQ-ANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 745 RTKEAGELILSMPF 758
             ++A  +    P 
Sbjct: 363 HVEDATRVFEESPI 376



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/597 (23%), Positives = 265/597 (44%), Gaps = 87/597 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+    T DL+LGK  H  ++ +    D F+ N+L+ +Y++CG    AR LFD +PDR
Sbjct: 15  SVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDR 74

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SWN++ + Y HS     +   E   LF  +  S    +  +L+ ++ +C        
Sbjct: 75  SVVSWNALFSCYVHS-----DMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQ 129

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HGY +K+G   D F + ALV++Y+K G + +A  +FD + + D+V W  ++     
Sbjct: 130 GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVL 189

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNN-- 294
           + +      L  ++++SG+CP+  ++   L   + +  R    Q+ +  IK+ + +++  
Sbjct: 190 HEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFL 249

Query: 295 --------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      +++ WN  +SG+ Q  ++  A   F  M    +
Sbjct: 250 GVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGI 309

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
            ++  T    L ++A      + +QIH  +LKSGF     V NSLI+ Y K G V     
Sbjct: 310 GFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATR 369

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G++ D F  +S+L A +SL  
Sbjct: 370 VFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL-S 428

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
                KQ+HVH +K   ++D F   +L+++Y + GS+ +A   F       + +W+AMI 
Sbjct: 429 AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIG 488

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           G        +AL+LF  M   G   + IT+ + + AC    ++ + K  +  +MK  F +
Sbjct: 489 GLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKH-YFNSMKILFGI 547

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-----VDNGEE 574
           +      + ++D+  + G +  A  + N +P   + + W  ++        +D GE+
Sbjct: 548 EPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQ 604



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 124/227 (54%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           MH  G + +E    + +KAC     L  GKQ+H   + +GF+ D  V++ ++ +Y KCG 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
             DA+S+F+ IP    V+W  + S  V +     A+S++H M LSG+ P+EF+ + ++  
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + L    QGR+IH  LIKL   SD F   +LVDMYAK G +EDA  +F ++   + V W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           NA++ G   H      L+L  +M   G+ P+  T    L AC+   L
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMAL 227



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  H  IL    + D F  N+L+ MY++CGS+  A   F ++P R
Sbjct: 419 SLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR 478

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SW++++   A  G G      E  +LF+ + +     + +TL  +L  C  +G V  
Sbjct: 479 GIVSWSAMIGGLAQHGYGK-----EALQLFKQMLKVGVPPNHITLVSVLCACNHAGLV-- 531

Query: 178 SETVHGY-ALKI--GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML- 232
           +E  H + ++KI  G+   +     ++++  + GK+  A  L + M  + + ++W  +L 
Sbjct: 532 AEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLG 591

Query: 233 --RAYAENGFGEEVFHLFVDL 251
             R +     GE+   + + L
Sbjct: 592 AARIHKNIDLGEQAAEMLLAL 612


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 283/855 (33%), Positives = 424/855 (49%), Gaps = 119/855 (13%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H + +K G   D  +   LV +YSK  +   A+ L D   E DVV W  +L  Y +NGF
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR----------------HEE 279
            EE   +F ++   G+  ++ +   VL   S     ++G++                   
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122

Query: 280 QVQAYAIKLLLYNNN--------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
            V  YA   LL ++          NVV WN   S Y+Q      A+  F  M+RS +  +
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------------ 379
             +  + L A AG    +LG++IHG  LK G        N+L++MYSK            
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242

Query: 380 --------------MGCV-----------------CGLRTDQFTLASVLRASSSLPEGLH 408
                          GCV                  G R + FTL+S L+A +++     
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK-E 301

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L +Q+H   IK D  +D F +  L+D+Y +   M +A   +++    D+  WNA+I GY 
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
              +   A+ LFS M +     ++ T++T +K+   L  +K  KQ+H  ++KSG   D  
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V + +LD Y KC  + +A  IF +    D VA+T+MI+     G+ + AL +Y QM+ + 
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + PD F  + L+ A + L+A EQG+Q+H + IK     D F   SLV+MYAKCG+IEDA 
Sbjct: 482 IKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDAD 541

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
             F ++  R  V W+AM+ G AQHG+G+E L+LF  M   GV P+ +T + VL AC++ G
Sbjct: 542 RAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAG 601

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV+E  + F  M   +GI+P  EHY+ ++D LGR+G+  EA EL+ S+PFEA   +  AL
Sbjct: 602 LVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGAL 661

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGA R+  + E G+  A+ L  LEP  S  +VLL+NI+A+A  W++V   R  MK   VK
Sbjct: 662 LGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVK 721

Query: 829 KDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                       +D I+AK++ L   + + GY    +  + +V++ 
Sbjct: 722 KEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKS 781

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA----------------------- 902
           EKE+ LY+HSEKLA A+GLI+TPP   I   K                            
Sbjct: 782 EKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDI 841

Query: 903 NRFHHLRDGMCPCAD 917
           NRFHH +DG C C D
Sbjct: 842 NRFHHFKDGSCSCGD 856



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 178/690 (25%), Positives = 317/690 (45%), Gaps = 87/690 (12%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA ++      D  L N+L+T+YS+C    YAR+L D+  + D++SW+S+L+ Y  +G  
Sbjct: 4   HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG-- 61

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
               V E   +F  +       +  T   +LK C     +     VHG A+  G   D F
Sbjct: 62  ---FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGF 118

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V+  LV +Y+K G + +++ LF G+ ER+VV W  +   Y ++    E   LF ++ RSG
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG 178

Query: 256 LCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS--------------- 295
           + P++ S+  +L   +     DLG++    +    + L  ++ N+               
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238

Query: 296 ---------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                    +VV WN  ++G +    N  A+     M  S  + +  T   AL A A   
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
              LG+Q+H + +K   +S +     L++MYSK   +                       
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 384 ----CGLRTD----------------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
               CG   D                Q TL++VL++ +SL + + + KQIH  +IK+   
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASL-QAIKVCKQIHTISIKSGIY 417

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           +D +V  +L+D Y +   + EA  +FE +   DL  + +MI  Y    +  +AL+L+  M
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQM 477

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             +  + D    ++ + AC  L   +QGKQ+H +A+K GF  D+  S+ +++MY KCG++
Sbjct: 478 QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSI 537

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA   F++IP    V+W+ MI G   +G    AL +++QM   GV P+  T   ++ A 
Sbjct: 538 EDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCAC 597

Query: 604 SCLTALEQGRQIHAN---LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NT 659
           +    + +G+Q       +  +  + + +    ++D+  + G + +A  L   +    + 
Sbjct: 598 NHAGLVNEGKQYFEKMEVMFGIKPTQEHYA--CMIDLLGRSGKLNEAVELVNSIPFEADG 655

Query: 660 VLWNAMLVGLAQHGN---GEETLKLFEDMK 686
            +W A+L     H N   G++  K+  D++
Sbjct: 656 FVWGALLGAARIHKNIELGQKAAKMLFDLE 685



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 257/586 (43%), Gaps = 88/586 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+      DL +G+  H   + +    D F+ N L+ MY++CG L  +RRLF  + +R
Sbjct: 87  SVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVER 146

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SWN++ + Y  S     E   E   LF+ +  S    +  +++ +L  C        
Sbjct: 147 NVVSWNALFSCYVQS-----ELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDL 201

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HG  LK+GL  D+F + ALV++YSK G+I  A  +F  +   DVV W  ++     
Sbjct: 202 GRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVL 261

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN--- 293
           +   +    L  ++  SG  P+  ++   L   + +G K    Q+ +  IK+  +++   
Sbjct: 262 HDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFA 321

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      +++ WN  +SGY Q GD+  A+  F  M   ++
Sbjct: 322 AVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDI 381

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
            ++  T    L +VA    + + +QIH  ++KSG YS   V NSL++ Y K   +     
Sbjct: 382 DFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASK 441

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                   ++ D F  +S+L A ++L  
Sbjct: 442 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL-S 500

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
                KQ+HVHAIK   + D F S +L+++Y + GS+ +A+  F       + +W+AMI 
Sbjct: 501 AYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIG 560

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAMK 520
           GY    +  +AL LF+ M   G   + IT+ + + AC    ++ +GKQ        + +K
Sbjct: 561 GYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIK 620

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
              E   C    ++D+  + G + +A  + N IP   D   W  ++
Sbjct: 621 PTQEHYAC----MIDLLGRSGKLNEAVELVNSIPFEADGFVWGALL 662



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 158/298 (53%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H H IK     D  +   L+ +Y +      A  L +     D+ +W++++ GY+ + 
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +AL +F+ M   G + +E T  + +KAC     L  G+++H  A+ +GFE D  V++
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY KCG + D++ +F  I   + V+W  + S  V +     A+ ++ +M  SG++P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +EF+ +I++ A + L   + GR+IH  ++K+    D F   +LVDMY+K G IE A  +F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           + +   + V WNA++ G   H   +  L L ++MK  G  P+  T    L AC+  G 
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 270/873 (30%), Positives = 432/873 (49%), Gaps = 121/873 (13%)

Query: 165  LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--E 222
            +LK C+    + A   VH + ++   V D++   AL+N+Y + G I EA+ +++ +   E
Sbjct: 147  MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206

Query: 223  RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI---SDLGKRHEE 279
            R V  W  M+  Y + G+ EE   L  ++ + GL     +   +L      S L    E 
Sbjct: 207  RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 280  QVQAYAIKLLLYNNNSNVVL--------------------------WNKKLSGYLQVGDN 313
             V+A   +LL   N +N +L                          W   + GY   G +
Sbjct: 267  HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHS 326

Query: 314  HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
              A E F  M +  V  + +T++  L A +G   L  G+ +H   L +G  S + VG +L
Sbjct: 327  EIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTAL 386

Query: 374  INMYSKMGCV--C-----------------------------------------GLRTDQ 390
            + MY+K G    C                                         G+  ++
Sbjct: 387  VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNK 446

Query: 391  FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
             T   +L A  + P  LH  ++IH   +K+  + D  V  ALI +Y R GS+ +A  LF 
Sbjct: 447  ITYVILLNACVN-PTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFN 505

Query: 451  NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 D+ +W AMI G   S    +AL +F  M  +G + + +T  + + AC     L  
Sbjct: 506  KMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDW 565

Query: 511  GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            G+++H   +++G   D  V++ +++MY  CG++ DA+ +F+ +   D VA+  MI G   
Sbjct: 566  GRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAA 625

Query: 571  NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
            +     AL ++ +++  G+ PD+ T+  ++ A +   +LE  ++IH+ ++K    SD  +
Sbjct: 626  HNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSL 685

Query: 631  GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
            G +LV  YAKCG+  DA ++F +M  RN + WNA++ G AQHG G++ L+LFE MK  G+
Sbjct: 686  GNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGI 745

Query: 691  EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            +PD VTF+ +LSACS+ GL+ E    F  M   +GI P +EHY  +VD LGRAG+  E  
Sbjct: 746  KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVE 805

Query: 751  ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
             LI +MPF+A+  +  ALLGACR+ G+    +  AE  + L+P +++ YV LS+++AAA 
Sbjct: 806  ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAG 865

Query: 811  QWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIK 847
             WD     R  M+++ V K+P                       ++ I+A+++ L   +K
Sbjct: 866  MWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMK 925

Query: 848  EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
              GYVPDT  V+ DV+E EKE A+ +HSE+LA AYGLIST P + I              
Sbjct: 926  MEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHT 985

Query: 894  -------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                   + ++E +    NRFHH +DG+C C D
Sbjct: 986  ATKFITKIVDREIVARDVNRFHHFKDGVCSCGD 1018



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 197/766 (25%), Positives = 347/766 (45%), Gaps = 113/766 (14%)

Query: 13  HKHTYVIFSSFT-KDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLL 71
           H HTY    + T KD        ++ ++ +LQ+    +  +S  +  +L+  I   DL+ 
Sbjct: 109 HSHTYKDERTITGKDR-------AMDVVQYLQQQ--GARVNSCDYMKMLKRCIEVKDLVA 159

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM--PDRDLISWNSILAAY 129
           G+  H  I+    + D++  N L+ MY +CGS+  AR++++K+   +R + SWN+++  Y
Sbjct: 160 GREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGY 219

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G      + E  +L R +++      R T   LL  C S   +     +H  A+K  
Sbjct: 220 VQYGY-----IEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L++D  V+  ++N+Y+K G I EA+ +FD M+ + VV W +++  YA+ G  E  F +F 
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQ 334

Query: 250 DLHRSGLCPDDESVQCVLGVISD--------------LGKRHEEQVQAYAIKLLLYNN-- 293
            + + G+ P+  +   VL   S               L   HE  +      + +Y    
Sbjct: 335 KMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG 394

Query: 294 -------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                        N +++ WN  + G  + G+   A E +  M R  +  + +T+++ L 
Sbjct: 395 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLN 454

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------- 383
           A      L+ G++IH   +K GF   + V N+LI+MY++ G +                 
Sbjct: 455 ACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIIS 514

Query: 384 --------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                                      GL+ ++ T  S+L A SS P  L   ++IH   
Sbjct: 515 WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS-PAALDWGRRIHQQV 573

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           I+     D+ V+  L+++Y   GS+ +A  +F+     D+  +NAMI GY   N   +AL
Sbjct: 574 IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEAL 633

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           +LF  +   G + D++T    + AC     L+  K++H+  +K G+  D  + + ++  Y
Sbjct: 634 KLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTY 693

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG+  DA  +F+ +   + ++W  +I GC  +G     L ++ +M++ G+ PD  TF 
Sbjct: 694 AKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFV 753

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDAYI 649
            L+ A S    LE+GR+         CS     GI+        +VD+  + G +++   
Sbjct: 754 SLLSACSHAGLLEEGRRYF-------CSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEA 806

Query: 650 LFKQMDMR-NTVLWNAMLVGLAQHGN-------GEETLKLFEDMKA 687
           L K M  + NT +W A+L     HGN        E +LKL  D  A
Sbjct: 807 LIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAA 852



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 127/233 (54%), Gaps = 2/233 (0%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A+++  ++   G R++       +K C  +  L  G+++H + ++    LD    + ++
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDV--AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +MY++CG++ +A+ ++N +   +    +W  M+ G V  G  + AL +  +M+  G+   
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
             T   L+ +    +ALE GR+IH   +K     D  V   +++MYAKCG+I +A  +F 
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD 303

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +M+ ++ V W  ++ G A  G+ E   ++F+ M+  GV P+ +T+I VL+A S
Sbjct: 304 KMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
           +D A+ +   ++  G   +   +  ++K    +  L  GR++H ++I+     D +   +
Sbjct: 122 KDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA 181

Query: 634 LVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
           L++MY +CG+IE+A  ++ +++   R    WNAM+VG  Q+G  EE LKL  +M+ HG+ 
Sbjct: 182 LINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLA 241

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
               T + +LS+C     + E     H+   K  +  +V   + +++   + G   EA E
Sbjct: 242 LGRATTMRLLSSCKSPSAL-ECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300

Query: 752 LILSMPFEASAS 763
           +   M  ++  S
Sbjct: 301 VFDKMETKSVVS 312


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 281/949 (29%), Positives = 454/949 (47%), Gaps = 117/949 (12%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            G++ HA  +          TN L+ MY++ G +  AR LFD MP R+ +SWN++++    
Sbjct: 91   GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 132  SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET-VHGYALKIGL 190
             G        EG   FR + +     S   +A L+  C  SG ++     VHG+  K GL
Sbjct: 151  VGL-----YLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 205

Query: 191  VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            + D +VS A++++Y  +G +  ++ +F+ M +R+VV W  ++  Y++ G  EEV  ++ D
Sbjct: 206  LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD 265

Query: 251  ----------LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
                      + +SGL         ++ ++  +G         YA  +    +  + + W
Sbjct: 266  ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD------YANYIFDQMSERDTISW 319

Query: 301  NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
            N   + Y Q G    +   F  M R + + +S T    L+ +   D+   G+ IHG  +K
Sbjct: 320  NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 379

Query: 361  SGFYSAVIVGNSLINMYS--------------------------------------KMGC 382
             GF S V V N+L+ MY+                                       +G 
Sbjct: 380  MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 439

Query: 383  VC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
            +C     G   +  T  S L A+   P+     + +H   + +    +  +  AL+ +Y 
Sbjct: 440  LCSMISSGKSVNYVTFTSAL-AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 498

Query: 438  RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
            + G M+E+  +       D+  WNA+I GY    +  KAL  F  M   G   + IT+ +
Sbjct: 499  KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 558

Query: 498  AVKACGCLL---MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
             + AC  LL   +L++GK +HAY + +GFE D  V + ++ MY KCG +  +Q +FN + 
Sbjct: 559  VLSAC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 616

Query: 555  APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
              + + W  M++    +G  +  L +  +MR  GV  D+F+F+  + A++ L  LE+G+Q
Sbjct: 617  NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 676

Query: 615  IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            +H   +KL    D F+  +  DMY+KCG I +   +      R+   WN ++  L +HG 
Sbjct: 677  LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 736

Query: 675  GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
             EE    F +M   G++P  VTF+ +L+ACS+ GLV +    + ++   +G+EP +EH  
Sbjct: 737  FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 796

Query: 735  FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
             ++D LGR+GR  EA   I  MP + +  + R+LL +C++ G+ + G+  AE L  LEP 
Sbjct: 797  CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 856

Query: 795  DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----------------------PA 832
            D S YVL SN+FA   +W+DV + R +M  KN+KK                       P 
Sbjct: 857  DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 916

Query: 833  DL-IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
             + I+AK+E + K IKE GYV DT   L D +EE+KE  L+ HSE+LA AY L+STP  S
Sbjct: 917  TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 976

Query: 892  V--------ILSNKEPLYA---------------NRFHHLRDGMCPCAD 917
                     I S+   +Y                 RFHH   G+C C D
Sbjct: 977  TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKD 1025



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 144/661 (21%), Positives = 253/661 (38%), Gaps = 144/661 (21%)

Query: 35  SLSLLPFLQKSHFSSSSSS-SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           S  +   +++ H   +S++ S   S+L H         G+  H  ++         + N 
Sbjct: 335 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK---WGRGIHGLVVKMGFDSVVCVCNT 391

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY+  G  V A  +F +MP +DLISWNS++A++ + G        +   L  S+  S
Sbjct: 392 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS-----LDALGLLCSMISS 446

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               + +T    L  C +  +      +HG  +  GL +++ +  ALV++Y K G++ E+
Sbjct: 447 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 506

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV---- 269
           + +   M  RDVV W  ++  YAE+   ++    F  +   G+  +  +V  VL      
Sbjct: 507 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 566

Query: 270 -------------ISDLGKRHEEQVQAYAIKLL-----------LYN--NNSNVVLWNKK 303
                        I   G   +E V+   I +            L+N  +N N++ WN  
Sbjct: 567 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 626

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           L+     G     ++    M    V  D  +F   L+A A    L  GQQ+HG  +K GF
Sbjct: 627 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 686

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                + N+  +MYSK G +      +    SV R   SLP                   
Sbjct: 687 EHDSFIFNAAADMYSKCGEIG--EVVKMLPPSVNR---SLPSW----------------- 724

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
                   LI    R+G   E    F                        H+ LE+    
Sbjct: 725 ------NILISALGRHGYFEEVCATF------------------------HEMLEM---- 750

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYV 538
              G +   +T  + + AC    ++ +G   +      + ++   E  +CV    +D+  
Sbjct: 751 ---GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV----IDLLG 803

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           + G + +A++  + +P  P+D+ W ++++ C  +G                         
Sbjct: 804 RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN------------------------ 839

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
                      L++GR+   NL KL+   D    +S  +M+A  G  ED   + KQM  +
Sbjct: 840 -----------LDRGRKAAENLSKLEPEDDSVYVLS-SNMFATTGRWEDVENVRKQMGFK 887

Query: 658 N 658
           N
Sbjct: 888 N 888



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 70/154 (45%)

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           S +T    GR +HA  +K           +L++MY K G ++ A  LF  M +RN V WN
Sbjct: 83  SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            M+ G+ + G   E ++ F  M   G++P S     +++AC  +G +       H    K
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 202

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            G+  +V   + ++   G  G    + ++   MP
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 236


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 296/972 (30%), Positives = 468/972 (48%), Gaps = 134/972 (13%)

Query: 70   LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            + GK+ HA  +  S     F TN L+ MYS+ G++ +AR +FD+M  R+  SW+++L+ Y
Sbjct: 761  MAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 820

Query: 130  AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE--TVHGYALK 187
               G        E   LF  +       +   +A L+  C  SGY+ A E   VHG+ +K
Sbjct: 821  VRVGL-----YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM-ADEGFQVHGFVVK 874

Query: 188  IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             G++ D +V  ALV+ Y   G +  A+ LF+ M + +VV W  ++  Y+++G   EV ++
Sbjct: 875  TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 934

Query: 248  FVDLHRSGLCPDDESVQCV---LGVISD--LGKRHEEQVQAYAIK--------------- 287
            +  + + G+  +  +   V    G++ D  LG +    +  Y  +               
Sbjct: 935  YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 994

Query: 288  ---------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                     +  + N  +++ WN  +S Y   G    ++ CF  M   + + +S T    
Sbjct: 995  FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL 1054

Query: 339  LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------- 381
            L+  +  DNL  G+ IHG  +K G  S V + N+L+ +YS+ G                 
Sbjct: 1055 LSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDL 1114

Query: 382  ---------------CVCGLRT-----------DQFTLASVLRASSSLPEGLHLSKQIHV 415
                           C+ GL+            +  T AS L A S+ PE L  SK +H 
Sbjct: 1115 ISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN-PECLIESKIVHA 1173

Query: 416  HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
              I         V  AL+ +Y + G M EA+ + +     D  TWNA+I G+  +   ++
Sbjct: 1174 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNE 1233

Query: 476  ALELFSHMHTSGERLDEITIATAVKACGCLL-MLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            A++ +  +   G   + IT+ + + AC     +LK G  +HA+ + +GFE D  V + ++
Sbjct: 1234 AVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLI 1293

Query: 535  DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
             MY KCG +  +  IF+ +     + W  M++    +G  + AL I+ +MR  GV  D+F
Sbjct: 1294 TMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQF 1353

Query: 595  TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            +F+  + A++ L  LE+G+Q+H  +IKL   SD  V  + +DMY KCG + D   +  Q 
Sbjct: 1354 SFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQP 1413

Query: 655  DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              R+ + WN ++   A+HG  ++  + F +M   G +PD VTF+ +LSAC++ GLV E  
Sbjct: 1414 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 1473

Query: 715  ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
              +  M  ++G+ P +EH   ++D LGR+GR   A   I  MP   +    R+LL ACR+
Sbjct: 1474 AYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRI 1533

Query: 775  QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
             G+ E  +  AE L+ L+P D SAYVL SN+ A + +W+DV + R EM   N+KK P   
Sbjct: 1534 HGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 1593

Query: 832  --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                A  I AK+  L+K  KE GYVPDT F L D++EE+KE  L
Sbjct: 1594 WVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNL 1653

Query: 872  YYHSEKLARAYGLISTPPSSV--ILSN------------------------KEPLYANRF 905
            + HSE+LA A+GLI+TP SS   I  N                        ++P    RF
Sbjct: 1654 WNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPY---RF 1710

Query: 906  HHLRDGMCPCAD 917
            HH   G C C D
Sbjct: 1711 HHFSGGKCSCGD 1722



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 154/479 (32%), Positives = 251/479 (52%), Gaps = 2/479 (0%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           CG++ +QFT  S LRA +SL   L +  Q+     K   V + FV +AL+D + + G M 
Sbjct: 125 CGVKANQFTYGSALRACTSL-RCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKME 183

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A YLF      D+ +WNAMI GY +   +  +  +F  M   G   D  T+ + ++A  
Sbjct: 184 DASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 243

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
               L    Q+H    + G+     V+  +++ Y K G++  A+ +   +   D  + T 
Sbjct: 244 EGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTA 303

Query: 564 MISGCVDNGEEDL-ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +I+G    G   + AL ++ +M    +  D+     ++   + L +   G QIHA  +K 
Sbjct: 304 LITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKY 363

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             S D  +G +L+DMYAK G IEDA   F +M+ +N + W +++ G A+HG G   + L+
Sbjct: 364 QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLY 423

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           + M++ G +P+ VTF+ +L ACS+TGL +E  E F+ M  KY I+P  EHYS +VD   R
Sbjct: 424 KKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFAR 483

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
            G  +EA  L+  +  + +AS+  A+LGA  + G    GK  A  L  ++P +S  YV+L
Sbjct: 484 QGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVL 543

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           ++I++AA  WDD    R  M+ ++ KK+     F   +  I  ++    V   DF +LD
Sbjct: 544 ASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLLQVQHGVSRRDFNILD 602



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 164/735 (22%), Positives = 296/735 (40%), Gaps = 98/735 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR +     L++    H  I          +T  L+  Y++ GSL  A+ L   M  +
Sbjct: 237 SVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKK 296

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL S  +++  YAH G  +     +   LF+ + +       + L  +L +C +      
Sbjct: 297 DLFSSTALITGYAHEGIYS----VDALDLFKEMNQMNIGMDDVILCSMLNICANLASFAL 352

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H +ALK    +D  +  AL+++Y+K G+I +AK  FD M+E++V+ W  ++  YA+
Sbjct: 353 GTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAK 412

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------EQVQAYAIKLLLY 291
           +G+G     L+  +   G  P+D +   +L   S  G   E        V  Y IK    
Sbjct: 413 HGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAE 472

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           + +  V L+ ++  G L+        E +  + + ++++++  +   L A +    ++LG
Sbjct: 473 HYSCMVDLFARQ--GLLE--------EAYNLLCKIDIKHNASLWGAILGASSIYGYMSLG 522

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           ++                 ++L NM  +         +   LAS+  A+    +   + K
Sbjct: 523 KE---------------AASNLFNMQPEN------SVNYVVLASIYSAAGLWDDAWKIRK 561

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
            +   + K +     F +T             ++  L + + G     +N + FG I  +
Sbjct: 562 LMEERSTKKNAGYSFFQATK------------KSIPLLQVQHGVSRRDFNILDFGAIFLS 609

Query: 472 NSHKALELF------------------SHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
           N     E F                  S  H S +    +T++  V   G  L ++Q ++
Sbjct: 610 NRTPQEECFPDTFVLEPSFLPPSAVWKSSDHRSVQLNGNLTVS--VDEVGSALGMRQVEK 667

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP--------DDVAWTTMI 565
                  +G +            +     +  A ++ N+ P          DD+  +   
Sbjct: 668 PKTVGSHTGQK-----------QWAPVSTITTASALINETPVENFAEQVKDDDLKTSNAG 716

Query: 566 S---GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           S   GC+D    D+A     Q      +         +K  S +T+   G+ +HA  I  
Sbjct: 717 SRRWGCLDG---DIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVG 773

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             +   F   +L++MY+K GNIE A  +F +M  RN   W+ ML G  + G  EE + LF
Sbjct: 774 SVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLF 833

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             M   GVEP+      +++ACS +G +++     H    K GI  +V   + LV   G 
Sbjct: 834 CQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGS 893

Query: 743 AGRTKEAGELILSMP 757
            G    A +L   MP
Sbjct: 894 IGLVYNAQKLFEEMP 908



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 177/394 (44%), Gaps = 26/394 (6%)

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS---------------KQ---IHVHA 417
           M+SK+   C L      LA  L+  SS P  L  S               KQ   IH H 
Sbjct: 1   MFSKIQSACNLGR----LAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHL 56

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           I N   +D  ++T LI  Y + G +  A  +F+      + +W AM+ GY  +    KA 
Sbjct: 57  ITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAF 116

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LFS M   G + ++ T  +A++AC  L  L  G Q+     K  F  +L V S ++D +
Sbjct: 117 VLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFH 176

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG M DA  +F  +   D V+W  MI G    G  D +  ++  M   G+VPD +T  
Sbjct: 177 SKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLG 236

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            +++AS+    L    QIH  + +L   S   V   L++ YAK G++  A  L K M  +
Sbjct: 237 SVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKK 296

Query: 658 NTVLWNAMLVGLAQHG-NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-E 715
           +     A++ G A  G    + L LF++M    +  D V    +L+ C+   L S A   
Sbjct: 297 DLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICA--NLASFALGT 354

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             H    KY    +V   + L+D   ++G  ++A
Sbjct: 355 QIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDA 388



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 135/589 (22%), Positives = 247/589 (41%), Gaps = 89/589 (15%)

Query: 68   DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
            D +LG      I+         + N+L++M+S   S+  A  +FD M + D+ISWN++++
Sbjct: 962  DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 1021

Query: 128  AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            AYAH G        E  R F  +R     T+  TL+ LL +C S   +     +HG  +K
Sbjct: 1022 AYAHHGL-----CRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK 1076

Query: 188  IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            +GL  +  +   L+ +YS+ G+  +A+ +F  M ERD++ W  M+  Y ++G   +   +
Sbjct: 1077 LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 1136

Query: 248  FVDLHRSGLCPDDESVQCVLGVISD---------------LGKRHEEQVQAYAI------ 286
              +L + G   +  +    L   S+               +   H+  +   A+      
Sbjct: 1137 LAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGK 1196

Query: 287  --------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                    K+L      + V WN  + G+ +  + + A++ +  +    +  + +T +  
Sbjct: 1197 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 1256

Query: 339  LAAVAGTDN-LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------- 383
            L A +  D+ L  G  IH   + +GF S   V NSLI MY+K G +              
Sbjct: 1257 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 1316

Query: 384  -----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                          G+  DQF+ +  L A+++L   L   +Q+H
Sbjct: 1317 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV-LEEGQQLH 1375

Query: 415  VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
               IK    +D  V+ A +D+Y + G M +   +          +WN +I  +       
Sbjct: 1376 GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQ 1435

Query: 475  KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCV 529
            KA E F  M   G + D +T  + + AC    ++ +G          + +  G E  +C 
Sbjct: 1436 KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVC- 1494

Query: 530  SSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
               I+D+  + G +  A+    ++P  P+D+AW ++++ C  +G  +LA
Sbjct: 1495 ---IIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA 1540



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 35/358 (9%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S +  IL+  I       G   H  ++ +    D  L   L+  Y + G ++ AR +FD 
Sbjct: 31  SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG 90

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP+R ++SW ++++ Y+ +G        + F LF  +R      ++ T    L+ C S  
Sbjct: 91  MPERSVVSWTAMVSGYSQNGR-----FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLR 145

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     V G   K   V + FV  ALV+ +SK GK+ +A +LF  M ERDVV W  M+ 
Sbjct: 146 CLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIG 205

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRH 277
            YA  GF ++ F +F  + R GL PD  ++  VL                G+I+ LG   
Sbjct: 206 GYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 265

Query: 278 EEQVQAYAIKLLLYNNN-------------SNVVLWNKKLSGYLQVGD-NHGAIECFVNM 323
            + V    I     N +              ++      ++GY   G  +  A++ F  M
Sbjct: 266 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM 325

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            + N+  D V     L   A   +  LG QIH   LK      V +GN+LI+MY+K G
Sbjct: 326 NQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 197/453 (43%), Gaps = 51/453 (11%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y     F  + + F    H    ++   + S LR   S   L +G      I     + +
Sbjct: 106 YSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVEN 165

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F+ + L+  +S+CG +  A  LF  M +RD++SWN+++  YA  G  +     + F +F
Sbjct: 166 LFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD-----DSFCMF 220

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           RS+          TL  +L+     G +  +  +HG   ++G    + V+G L+N Y+K 
Sbjct: 221 RSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKN 280

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCV 266
           G +R AK L  GM ++D+     ++  YA  G +  +   LF ++++  +  DD  +  +
Sbjct: 281 GSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSM 340

Query: 267 LGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           L + ++L       Q+ A+A+K   Y  + +V + N  +  Y + G+   A   F  M  
Sbjct: 341 LNICANLASFALGTQIHAFALK---YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEE 397

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
            NV                         I  T+L SG Y+    G+  +++Y KM    G
Sbjct: 398 KNV-------------------------ISWTSLISG-YAKHGYGHMAVSLYKKMESK-G 430

Query: 386 LRTDQFTLASVLRASSS---LPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
            + +  T  S+L A S      EG    +  ++ + IK    A+ +  + ++D++ R G 
Sbjct: 431 FKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIK--PRAEHY--SCMVDLFARQGL 486

Query: 442 MAEAEYLFENKD-GFDLATWNAM-----IFGYI 468
           + EA  L    D   + + W A+     I+GY+
Sbjct: 487 LEEAYNLLCKIDIKHNASLWGAILGASSIYGYM 519


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/834 (32%), Positives = 408/834 (48%), Gaps = 117/834 (14%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L++ YSK  +   A+ +FD + +   V W  ++ AY+ NG        F  +   G+C +
Sbjct: 43  LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102

Query: 260 DESVQCVLGVISD--LGKRHEEQVQAYAIKLLLYNNNS---------------------- 295
           + ++  VL  + D  LG +      A      ++  N+                      
Sbjct: 103 EFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAG 162

Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              N V WN  +S Y++      AI+ F  M+ S +Q     F   + A  G+ N++ G+
Sbjct: 163 SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGR 222

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CV--- 383
           Q+H   ++ G+   V   N+L++MY KMG                          CV   
Sbjct: 223 QVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 282

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                          GL  + F L+S+L+A +       L +QIH   IK +  +D ++ 
Sbjct: 283 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAG-AGAFDLGRQIHGFMIKANADSDDYIG 341

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             L+D+Y +N  + +A  +F+     DL  WNA+I G        +A  +F  +   G  
Sbjct: 342 VGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLG 401

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           ++  T+A  +K+   L      +Q+HA A K GF  D  V +G++D Y KC  + DA  +
Sbjct: 402 VNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 461

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F +  + D +A T+MI+        + A+ ++ +M   G+ PD F  + L+ A + L+A 
Sbjct: 462 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 521

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           EQG+Q+HA+LIK    SD F G +LV  YAKCG+IEDA + F  +  R  V W+AM+ GL
Sbjct: 522 EQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 581

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQHG+G+  L+LF  M   G+ P+ +T   VL AC++ GLV EA   F+ M+E +GI+  
Sbjct: 582 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRT 641

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            EHYS ++D LGRAG+  +A EL+ SMPF+A+AS+  ALLGA RV  D E GK  AEKL 
Sbjct: 642 EEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLF 701

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
            LEP  S  +VLL+N +A++  W++V   R  MK  N+KK+PA                 
Sbjct: 702 ILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGD 761

Query: 833 ------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I++K++ L   + + GY+P+ D  L D++  EKE  L +HSE+LA A+ L+S
Sbjct: 762 KSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLS 821

Query: 887 TPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCAD 917
           TPP + I   K                            NRFHH RDG C C D
Sbjct: 822 TPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGD 875



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 241/562 (42%), Gaps = 82/562 (14%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDRDLISWNSIL 126
           D  LG   HA  + +    D F+ N L+ MY   G +  ARR+FD+   +R+ +SWN ++
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           +AY  +     +   +  ++F  +  S    +    + ++  C  S  + A   VH   +
Sbjct: 175 SAYVKN-----DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV 229

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           ++G   D F + ALV++Y K G++  A  +F+ M + DVV W  ++     NG       
Sbjct: 230 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 247 LFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-HEEQVQAY---------------- 284
           L + +  SGL P+   +  +L   +     DLG++ H   ++A                 
Sbjct: 290 LLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYA 349

Query: 285 -------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                  A+K+  + ++ +++LWN  +SG    G +  A   F  + +  +  +  T   
Sbjct: 350 KNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAA 409

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------- 384
            L + A  +  +  +Q+H    K GF     V N LI+ Y K  C+              
Sbjct: 410 VLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGD 469

Query: 385 ------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         GL  D F L+S+L A +SL       KQ+H
Sbjct: 470 IIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL-SAYEQGKQVH 528

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            H IK   ++D+F   AL+  Y + GS+ +AE  F +     + +W+AMI G     +  
Sbjct: 529 AHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGK 588

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SG 532
           +ALELF  M   G   + IT+ + + AC    ++ + K+ +  +MK  F +D      S 
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEEHYSC 647

Query: 533 ILDMYVKCGAMVDAQSIFNDIP 554
           ++D+  + G + DA  + N +P
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMP 669



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 14/295 (4%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M ++G    ++T   A +A      L  G  +HA  +KSGF   L   + ++  Y KC  
Sbjct: 1   MRSAGTISQQLTRYAAAQA------LLPGAHLHANLLKSGFLASL--RNHLISFYSKCRR 52

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
              A+ +F++IP P  V+W+++++   +NG    A+  +H MR  GV  +EF   +++K 
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK- 111

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVL 661
             C+   + G Q+HA  +     SD FV  +LV MY   G ++DA  +F +    RN V 
Sbjct: 112 --CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVS 169

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WN ++    ++    + +++F +M   G++P    F  V++AC+ +  + +A    H M 
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMV 228

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            + G E +V   + LVD   + GR   A  +   MP ++      AL+  C + G
Sbjct: 229 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNG 282



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 34/313 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+         LG+  H  ++ ++   D ++   L+ MY++   L  A ++FD M  R
Sbjct: 308 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR 367

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DLI WN++++  +H G  +     E F +F  LR+     +R TLA +LK   S     A
Sbjct: 368 DLILWNALISGCSHGGRHD-----EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA 422

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH  A KIG ++D  V   L++ Y K   + +A  +F+     D++    M+ A ++
Sbjct: 423 TRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ 482

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------- 287
              GE    LF+++ R GL PD   +  +L   + L    + +QV A+ IK         
Sbjct: 483 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 542

Query: 288 --LLLYN-----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
              L+Y                      VV W+  + G  Q G    A+E F  M+   +
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 602

Query: 329 QYDSVTFLVALAA 341
             + +T    L A
Sbjct: 603 NPNHITMTSVLCA 615



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  HA ++    + D F  N L+  Y++CGS+  A   F  +P+R
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++SW++++   A  G G          LF  + +     + +T+  +L  C  +G V  
Sbjct: 570 GVVSWSAMIGGLAQHGHGK-----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           A    +      G+   E     ++++  + GK+ +A  L + M  + +  +W  +L A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 683


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 296/970 (30%), Positives = 467/970 (48%), Gaps = 134/970 (13%)

Query: 70   LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            + GK+ HA  +  S     F TN L+ MYS+ G++ +AR +FD+M  R+  SW+++L+ Y
Sbjct: 111  MAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 170

Query: 130  AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE--TVHGYALK 187
               G        E   LF  +       +   +A L+  C  SGY+ A E   VHG+ +K
Sbjct: 171  VRVGL-----YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM-ADEGFQVHGFVVK 224

Query: 188  IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             G++ D +V  ALV+ Y   G +  A+ LF+ M + +VV W  ++  Y+++G   EV ++
Sbjct: 225  TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 284

Query: 248  FVDLHRSGLCPDDESVQCV---LGVISD--LGKRHEEQVQAY------------------ 284
            +  + + G+  +  +   V    G++ D  LG +    +  Y                  
Sbjct: 285  YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 344

Query: 285  ------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                  A  +  + N  +++ WN  +S Y   G    ++ CF  M   + + +S T    
Sbjct: 345  FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL 404

Query: 339  LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------- 381
            L+  +  DNL  G+ IHG  +K G  S V + N+L+ +YS+ G                 
Sbjct: 405  LSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDL 464

Query: 382  ---------------CVCGLRT-----------DQFTLASVLRASSSLPEGLHLSKQIHV 415
                           C+ GL+            +  T AS L A S+ PE L  SK +H 
Sbjct: 465  ISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN-PECLIESKIVHA 523

Query: 416  HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
              I         V  AL+ +Y + G M EA+ + +     D  TWNA+I G+  +   ++
Sbjct: 524  LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNE 583

Query: 476  ALELFSHMHTSGERLDEITIATAVKACGCLL-MLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            A++ +  +   G   + IT+ + + AC     +LK G  +HA+ + +GFE D  V + ++
Sbjct: 584  AVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLI 643

Query: 535  DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
             MY KCG +  +  IF+ +     + W  M++    +G  + AL I+ +MR  GV  D+F
Sbjct: 644  TMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQF 703

Query: 595  TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            +F+  + A++ L  LE+G+Q+H  +IKL   SD  V  + +DMY KCG + D   +  Q 
Sbjct: 704  SFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQP 763

Query: 655  DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              R+ + WN ++   A+HG  ++  + F +M   G +PD VTF+ +LSAC++ GLV E  
Sbjct: 764  INRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 823

Query: 715  ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
              +  M  ++G+ P +EH   ++D LGR+GR   A   I  MP   +    R+LL ACR+
Sbjct: 824  AYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRI 883

Query: 775  QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
             G+ E  +  AE L+ L+P D SAYVL SN+ A + +W+DV + R EM   N+KK P   
Sbjct: 884  HGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 943

Query: 832  --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                A  I AK+  L+K  KE GYVPDT F L D++EE+KE  L
Sbjct: 944  WVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNL 1003

Query: 872  YYHSEKLARAYGLISTPPSSV--ILSN------------------------KEPLYANRF 905
            + HSE+LA A+GLI+TP SS   I  N                        ++P    RF
Sbjct: 1004 WNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPY---RF 1060

Query: 906  HHLRDGMCPC 915
            HH   G C C
Sbjct: 1061 HHFSGGKCSC 1070



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/589 (22%), Positives = 247/589 (41%), Gaps = 89/589 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D +LG      I+         + N+L++M+S   S+  A  +FD M + D+ISWN++++
Sbjct: 312 DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 371

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AYAH G        E  R F  +R     T+  TL+ LL +C S   +     +HG  +K
Sbjct: 372 AYAHHGL-----CRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK 426

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +GL  +  +   L+ +YS+ G+  +A+ +F  M ERD++ W  M+  Y ++G   +   +
Sbjct: 427 LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 486

Query: 248 FVDLHRSGLCPDDESVQCVLGVISD---------------LGKRHEEQVQAYAI------ 286
             +L + G   +  +    L   S+               +   H+  +   A+      
Sbjct: 487 LAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGK 546

Query: 287 --------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                   K+L      + V WN  + G+ +  + + A++ +  +    +  + +T +  
Sbjct: 547 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 606

Query: 339 LAAVAGTDN-LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------- 383
           L A +  D+ L  G  IH   + +GF S   V NSLI MY+K G +              
Sbjct: 607 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 666

Query: 384 -----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         G+  DQF+ +  L A+++L   L   +Q+H
Sbjct: 667 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV-LEEGQQLH 725

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              IK    +D  V+ A +D+Y + G M +   +          +WN +I  +       
Sbjct: 726 GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQ 785

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCV 529
           KA E F  M   G + D +T  + + AC    ++ +G          + +  G E  +C 
Sbjct: 786 KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVC- 844

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
              I+D+  + G +  A+    ++P  P+D+AW ++++ C  +G  +LA
Sbjct: 845 ---IIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA 890



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 78/158 (49%)

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           +K  S +T+   G+ +HA  I    +   F   +L++MY+K GNIE A  +F +M  RN 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
             W+ ML G  + G  EE + LF  M   GVEP+      +++ACS +G +++     H 
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
              K GI  +V   + LV   G  G    A +L   MP
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 258


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 273/875 (31%), Positives = 424/875 (48%), Gaps = 120/875 (13%)

Query: 162 LAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            A  L+ C  SG  W     +H  A+  GL     +   L+++Y+K G +R A+ +F+ +
Sbjct: 44  FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
             RD V W  +L  YA+NG GEE   L+ ++HRSG+ P    +  +L   +      LG+
Sbjct: 104 SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR 163

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLW------------------------NKKLSGYLQVG 311
               QV         +  N+ + L+                        N  +SG+ Q G
Sbjct: 164 LIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCG 223

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A+  F  M  S +  DSVT    LAA +   +L  G+Q+H   LK+G     I+  
Sbjct: 224 HGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEG 283

Query: 372 SLINMYSKMGCV-------------------------------------------CGLRT 388
           SL+++Y K G +                                            G+R 
Sbjct: 284 SLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRP 343

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           ++FT   +LR  +   E + L +QIH   IKN   +D +VS  LID+Y + G + +A+ +
Sbjct: 344 NKFTYPCMLRTCTHTGE-IGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            +  +  D+ +W +MI GY+      +ALE F  M   G   D I +A+A+ AC  +  +
Sbjct: 403 LDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAV 462

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            QG Q+HA    SG+  D+ + +G++ +Y +CG   +A S F  I   + + W  +ISG 
Sbjct: 463 HQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGF 522

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G  + AL ++ +M  +G   + FTF   + AS+ L  ++QG+QIHA +IK   +S+ 
Sbjct: 523 AQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSET 582

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            +  +L+ +Y KCG+IEDA + F +M  RN V WN ++   +QHG G E L LF+ MK  
Sbjct: 583 EISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQ 642

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G++P  VTF+GVL+ACS+ GLV E    F  M  ++GI P  +HY+ +VD LGRAG+   
Sbjct: 643 GLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDR 702

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A   +  MP  A + + R LL AC+V  + E G++ A+ L+ LEP DS++YVLLSN +A 
Sbjct: 703 AKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAV 762

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
             +W      R  MK + V+K+P                       AD I+  +  L  R
Sbjct: 763 TGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDR 822

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI--------- 893
           + + GY  +   +  + E+E K+   + HSEKLA A+GL+S P   P  VI         
Sbjct: 823 LYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDC 882

Query: 894 ---------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                    +  +E +  +  RFHH  +G C C D
Sbjct: 883 HTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGD 917



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 253/585 (43%), Gaps = 80/585 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL     T    LG+  H ++       + F+ N L+++Y RC S   A R+F  M   
Sbjct: 148 SILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYC 207

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N++++ +A  G G+         +F  ++ S      +T+A LL  C + G +  
Sbjct: 208 DSVTFNTLISGHAQCGHGD-----RALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y LK G+  D  + G+L+++Y K G I EA  +FD     +VVLW +ML AY +
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ 322

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
                + F +F  +  +G+ P+  +  C+L   +  G+    EQ+ +  IK         
Sbjct: 323 IDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYV 382

Query: 288 -------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                              +L      +VV W   ++GY+Q      A+E F  M    +
Sbjct: 383 SGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGI 442

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
             D++    A++A AG   ++ G QIH     SG+ + V + N L+ +Y++ G       
Sbjct: 443 WPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFS 502

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G + + FT  S + AS++L +
Sbjct: 503 SFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLAD 562

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            +   KQIH   IK    +++ +S ALI +Y + GS+ +A+  F      +  +WN +I 
Sbjct: 563 -IKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIIT 621

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-QMHAYAMKSGFE 524
                    +AL+LF  M   G +  ++T    + AC  + ++++G     + + + G  
Sbjct: 622 CCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIH 681

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
                 + ++D+  + G +  A+    ++P P D + W T++S C
Sbjct: 682 PRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSAC 726



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 152/293 (51%), Gaps = 2/293 (0%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHA 516
           A++N  + G++  ++  K L LF+        L  +  A A++AC G         ++HA
Sbjct: 7   ASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHA 66

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+  G      + + ++D+Y K G +  A+ +F ++   D+V+W  ++SG   NG  + 
Sbjct: 67  KAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEE 126

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           A+ +Y +M  SGVVP  +  + ++ A +     + GR IH  + K    S+ FVG +L+ 
Sbjct: 127 AVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALIS 186

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y +C +   A  +F  M   ++V +N ++ G AQ G+G+  L +F++M+  G+ PDSVT
Sbjct: 187 LYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVT 246

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
              +L+ACS  G + +  +  H    K G+  +      L+D   ++G  +EA
Sbjct: 247 IASLLAACSAVGDLRKG-KQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEA 298


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 271/853 (31%), Positives = 415/853 (48%), Gaps = 104/853 (12%)

Query: 160 LTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           L  A  L+ C  +G  W     +H  A+  GL     V   L+++YSK G +  A+ +F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG---------- 268
            +  RD V W  ML  YA+NG GEE   L+  +HR+G+ P    +  VL           
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161

Query: 269 --VISDLGKRH----EEQVQAYAIKLLLYNN-------------NSNVVLWNKKLSGYLQ 309
             +I   G +H    E  V    I L L                + + V +N  +SG+ Q
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A+E F  M  S +  D VT    LAA A   +L  G Q+H    K+G  S  I+
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281

Query: 370 GNSLINMYSKMGCV-------------------------------------------CGL 386
             SL+++Y K G V                                            G+
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R +QFT   +LR  +   E + L +QIH  ++K    +D +VS  LID+Y + G + +A 
Sbjct: 342 RPNQFTYPCILRTCTCTRE-IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            + E     D+ +W +MI GY+       AL  F  M   G   D I +A+A+  C  + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++QG Q+HA    SG+  D+ + + ++++Y +CG + +A S F ++   D +    ++S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVS 520

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G  + AL ++ +M  SGV  + FTF   + AS+ L  ++QG+QIHA +IK   S 
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           +  VG +L+ +Y KCG+ EDA + F +M  RN V WN ++   +QHG G E L LF+ MK
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G++P+ VTFIGVL+ACS+ GLV E    F  M ++YGI P  +HY+ ++D  GRAG+ 
Sbjct: 641 KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
             A + I  MP  A A + R LL AC+V  + E G++ A+ L+ LEP DS++YVLLSN +
Sbjct: 701 DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760

Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
           A   +W +    R  M+ + V+K+P                       A+ I+  +  + 
Sbjct: 761 AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------SSVILSN 896
            R+ + GY  +   +  D E+E ++     HSEKLA  +GL+S PP        ++ +  
Sbjct: 821 DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRVEK 880

Query: 897 KEPLYANRFHHLR 909
              LYAN  H  R
Sbjct: 881 YTSLYANFLHQKR 893



 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 183/734 (24%), Positives = 340/734 (46%), Gaps = 94/734 (12%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA+ +       R + N L+ +YS+ G ++ ARR+F+++  RD +SW ++L+ YA +G G
Sbjct: 65  HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E   L+R +  +    +   L+ +L  C  +        +H    K G   + F
Sbjct: 125 E-----EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  A++ +Y + G  R A+ +F  M  RD V +  ++  +A+ G GE    +F ++  SG
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------------------------L 288
           L PD  ++  +L   + LG   +  Q+ +Y  K                          L
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 289 LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           +++N  + +NVVLWN  L  + Q+ D   + E F  M  + ++ +  T+   L     T 
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
            ++LG+QIH  ++K+GF S + V   LI+MYSK G +                       
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 384 --------------------CGLRTDQFTLASVLRASS---SLPEGLHLSKQIHVHAIKN 420
                               CG+  D   LAS +   +   ++ +GL +  +I+V     
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           D      +  AL+++Y R G + EA   FE  +  D  T N ++ G+  S    +AL++F
Sbjct: 480 DVS----IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVF 535

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M  SG + +  T  +A+ A   L  +KQGKQ+HA  +K+G   +  V + ++ +Y KC
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G+  DA+  F+++   ++V+W T+I+ C  +G    AL ++ QM+  G+ P++ TF  ++
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVL 655

Query: 601 KASSCLTALEQGRQIHANLI-KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RN 658
            A S +  +E+G     ++  +      P     ++D++ + G ++ A    ++M +  +
Sbjct: 656 AACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD 715

Query: 659 TVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++W  +L     H N   GE   K   +++ H    DS +++ + +A + T   +   +
Sbjct: 716 AMVWRTLLSACKVHKNIEVGEFAAKHLLELEPH----DSASYVLLSNAYAVTEKWANRDQ 771

Query: 716 NFHLMREKYGIEPE 729
              +MR++ G+  E
Sbjct: 772 VRKMMRDR-GVRKE 784



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 165/721 (22%), Positives = 303/721 (42%), Gaps = 108/721 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L           G+  HA+        + F+ N ++T+Y RCGS   A R+F  MP R
Sbjct: 148 SVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +++N++++ +A  G G          +F  ++ S      +T++ LL  C S G +  
Sbjct: 208 DTVTFNTLISGHAQCGHGE-----HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H Y  K G+  D  + G+L+++Y K G +  A  +F+     +VVLW +ML A+ +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK----- 287
                + F LF  +  +G+ P+  +  C+L   +     DLG    EQ+ + ++K     
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG----EQIHSLSVKTGFES 378

Query: 288 -----------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                  +L      +VV W   ++GY+Q      A+  F  M 
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           +  +  D++    A++  AG + +  G QIH     SG+   V + N+L+N+Y++ G + 
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIR 498

Query: 384 ------------------------------------------CGLRTDQFTLASVLRASS 401
                                                      G++ + FT  S L AS+
Sbjct: 499 EAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           +L E +   KQIH   IK     ++ V  ALI +Y + GS  +A+  F      +  +WN
Sbjct: 559 NLAE-IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMH-A 516
            +I          +AL+LF  M   G + +++T    + AC  + ++++G    K M   
Sbjct: 618 TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDE 677

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-VDNGEE 574
           Y ++   +   CV    +D++ + G +  A+    ++P A D + W T++S C V    E
Sbjct: 678 YGIRPRPDHYACV----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
               +  H + L     D  ++ +L  A +         Q+   +       +P  G S 
Sbjct: 734 VGEFAAKHLLELE--PHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEP--GRSW 789

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV---GLAQHGNGEETLKLFEDMKAHGVE 691
           +++     N+  A+ +  ++      ++N + V    +A+ G  +E   LF D +  G +
Sbjct: 790 IEVK----NVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRD 845

Query: 692 P 692
           P
Sbjct: 846 P 846



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 137/252 (54%), Gaps = 1/252 (0%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHA 516
           A+    + G++   +  K L LF+        L  +  A A++AC G     +   ++HA
Sbjct: 7   ASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHA 66

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+  G      V + ++D+Y K G ++ A+ +F ++ A D+V+W  M+SG   NG  + 
Sbjct: 67  KAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEE 126

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL +Y QM  +GVVP  +  + ++ + +      QGR IHA   K    S+ FVG +++ 
Sbjct: 127 ALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVIT 186

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y +CG+   A  +F  M  R+TV +N ++ G AQ G+GE  L++FE+M+  G+ PD VT
Sbjct: 187 LYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVT 246

Query: 697 FIGVLSACSYTG 708
              +L+AC+  G
Sbjct: 247 ISSLLAACASLG 258


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 259/754 (34%), Positives = 391/754 (51%), Gaps = 96/754 (12%)

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           R G+ P+   +  +L +    G  +E      A +L    +N +VV WN  +SGY   G 
Sbjct: 72  RFGMKPNVYIINTLLKLYVHCGSVNE------ARRLFDKFSNKSVVSWNVMISGYAHRGL 125

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A   F  M +  ++ D  TF+  L+A +    LN G+++H   +++G  +   VGN+
Sbjct: 126 GQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNA 185

Query: 373 LINMYSKMGCVC-------------------------------------------GLRTD 389
           LI+MY+K G V                                            G+R  
Sbjct: 186 LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPS 245

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           + T  +VL A  SL   L   KQIH   ++++  +D  VSTAL  +Y + G++ +A  +F
Sbjct: 246 RITYMNVLSACGSLA-ALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVF 304

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E     D+  WN MI G + S    +A  +F  M       D +T    + AC     L 
Sbjct: 305 ECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLA 364

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            GK++HA A+K G   D+   + +++MY K G+M DA+ +F+ +P  D V+WT ++ G  
Sbjct: 365 CGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYA 424

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
           D G+   + S + +M   GV  ++ T+  ++KA S   AL+ G++IHA ++K    +D  
Sbjct: 425 DCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLA 484

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           V  +L+ MY KCG++EDA  + + M  R+ V WN ++ GLAQ+G G E L+ FE MK+  
Sbjct: 485 VANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEE 544

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           + P++ TF+ V+SAC    LV E    F  MR+ YGI P  +HY+ +VD L RAG   EA
Sbjct: 545 MRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEA 604

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            ++IL+MPF+ SA+M  ALL ACR  G+ E G+  AE+ + LEP ++  YV LS I+AAA
Sbjct: 605 EDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAA 664

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
             W DV   R  MK + VKK+P                        + I++++E L K+I
Sbjct: 665 GMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQI 724

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           K  GYVPDT FV+ D+++E KERA+ +HSEKLA AYGLISTPP + I             
Sbjct: 725 KSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCH 784

Query: 894 --------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                   ++ +E +   A+RFHH ++G C C D
Sbjct: 785 TATKFISKITGREIIARDAHRFHHFKNGECSCGD 818



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 270/615 (43%), Gaps = 84/615 (13%)

Query: 38  LLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           +L +L +    S   S  +  +L+  +   DL +GK  H  IL     P+ ++ N L+ +
Sbjct: 31  VLQYLHQK--GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL 88

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           Y  CGS+  ARRLFDK  ++ ++SWN +++ YAH G G      E F LF  +++     
Sbjct: 89  YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQ-----EAFNLFTLMQQEGLEP 143

Query: 158 SRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            + T   +L  C S   + W  E VH   ++ GL  +  V  AL+++Y+K G +R+A+ +
Sbjct: 144 DKFTFVSILSACSSPAALNWGRE-VHVRVMEAGLANNATVGNALISMYAKCGSVRDARRV 202

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--- 273
           FD M  RD V W  +  AYAE+G+ +E    +  + + G+ P   +   VL     L   
Sbjct: 203 FDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAAL 262

Query: 274 --GKR---------HEEQVQAYAIKLLLYNN---------------NSNVVLWNKKLSGY 307
             GK+         H   V+       +Y                 N +V+ WN  + G 
Sbjct: 263 EKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGL 322

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           +  G    A   F  M++  V  D VT+L  L+A A    L  G++IH   +K G  S V
Sbjct: 323 VDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDV 382

Query: 368 IVGNSLINMYSKMGCV---------------------------C---------------- 384
             GN+LINMYSK G +                           C                
Sbjct: 383 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  ++ T   VL+A S+ P  L   K+IH   +K    AD  V+ AL+ +Y + GS+ +
Sbjct: 443 GVEANKITYMCVLKACSN-PVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVED 501

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  + E     D+ TWN +I G   +    +AL+ F  M +   R +  T    + AC  
Sbjct: 502 AIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRV 561

Query: 505 LLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
             ++++G++  A   K  G        + ++D+  + G + +A+ +   +P  P    W 
Sbjct: 562 RNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWG 621

Query: 563 TMISGCVDNGEEDLA 577
            +++ C  +G  ++ 
Sbjct: 622 ALLAACRAHGNVEIG 636



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 145/280 (51%), Gaps = 1/280 (0%)

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           ++  ++H  G ++D       +++C     L  GKQ+H + ++ G + ++ + + +L +Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           V CG++ +A+ +F+       V+W  MISG    G    A +++  M+  G+ PD+FTF 
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ A S   AL  GR++H  +++   +++  VG +L+ MYAKCG++ DA  +F  M  R
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           + V W  +    A+ G  +E+LK +  M   GV P  +T++ VLSAC     + E  +  
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAAL-EKGKQI 268

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           H    +     +V   + L     + G  K+A E+   +P
Sbjct: 269 HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 288/923 (31%), Positives = 444/923 (48%), Gaps = 127/923 (13%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+  Y   G L  A  +FD+MP R L  WN I   +    E     V   FR  R L ++
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFI--AERLMGRVPGLFR--RMLTKN 158

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           + F  R+  A +L+ C  +   +   E +H   +  G     F+   L+++Y K G +  
Sbjct: 159 VEFDERI-FAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD--ESVQCVLGVI 270
           AK +F+ ++ RD V W  M+   ++NG+ EE   LF  +  S     +  E  + + G++
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLV 277

Query: 271 SDLGKRHEEQVQAYAIKLLLYNNNSNV---------------VLWNKKLSGYLQVGDNHG 315
              G   E  V    + L  Y+ + N+               V +N  +SG  Q G  + 
Sbjct: 278 LKQGFSSETYVCNALVTL--YSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINR 335

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  F  M     + D VT    L+A A    L  G+Q H   +K+G  S ++V  SL++
Sbjct: 336 ALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLD 395

Query: 376 MYSKMGCV--------C--------------------GLRTDQFTLASVLRASSSLPEGL 407
           +Y K   +        C                    G+  +QFT  S+L+  ++L    
Sbjct: 396 LYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLG-AT 454

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
            L +QIH   +K     + +VS+ LID+Y ++G +  A  +F      D+ +W AMI GY
Sbjct: 455 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGY 514

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
              +   +AL LF  M   G + D I  A+A+ AC  +  L QG+Q+HA +  SG+  DL
Sbjct: 515 TQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDL 574

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            + + ++ +Y +CG + +A + F+ I A D+V+W +++SG   +G  + AL+I+ QM  +
Sbjct: 575 SIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKA 634

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+  + FTF   V A++ +  +  G+QIH  + K    S+  V  +L+ +YAKCG I+D 
Sbjct: 635 GLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD- 693

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
                       + WN+M+ G +QHG G E LKLFEDMK   V P+ VTF+GVLSACS+ 
Sbjct: 694 ------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHV 741

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV E    F  M E + + P+ EHY+ +VD LGR+G    A   +  MP +  A + R 
Sbjct: 742 GLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRT 801

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL AC V  + + G++ A  L+ LEP DS+ YVL+SN++A + +WD     R  MK + V
Sbjct: 802 LLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGV 861

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK+P                       AD+I+  + GL  R  E GYVP  + +L D E 
Sbjct: 862 KKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEI 921

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----------------------- 901
            +K+     HSE+LA A+GL+S       L++  PLY                       
Sbjct: 922 RQKDPTEIIHSERLAIAFGLLS-------LTSSTPLYVFKNLRVCEDCHNWIKHVSKITD 974

Query: 902 -------ANRFHHLRDGMCPCAD 917
                  + RFHH + G C C D
Sbjct: 975 RVIIVRDSYRFHHFKVGSCSCKD 997



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 162/719 (22%), Positives = 315/719 (43%), Gaps = 100/719 (13%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA+ + S      F+ N L+ +Y + G L  A+++F+ +  RD +SW ++++  + +
Sbjct: 184 EQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQN 243

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G        E   LF  +              +L  C    +    + +HG  LK G   
Sbjct: 244 GYEE-----EAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSS 284

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           + +V  ALV +YS+ G +  A+ +F  M +RD V +  ++   A+ G+      LF  ++
Sbjct: 285 ETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMN 344

Query: 253 RSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNNNSNVV 298
                PD  +V  +L   + +G   + +Q  +YAIK             L LY   S++ 
Sbjct: 345 LDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIK 404

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
             ++    Y Q+ + + + + F  M    +  +  T+   L         +LG+QIH   
Sbjct: 405 TAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQV 464

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
           LK+GF   V V + LI+MY+K G +                                   
Sbjct: 465 LKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEAL 524

Query: 384 --------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G+++D    AS + A + + + L   +QIH  +  +    D  +  AL+ +
Sbjct: 525 NLFKEMQDQGIKSDNIGFASAISACAGI-QALDQGRQIHAQSCLSGYSDDLSIGNALVSL 583

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y R G + EA   F+     D  +WN+++ G+  S    +AL +F+ M+ +G  ++  T 
Sbjct: 584 YARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTF 643

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            +AV A   +  ++ GKQ+H    K+G++ +  VS+ ++ +Y KCG +            
Sbjct: 644 GSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI------------ 691

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            DD++W +MI+G   +G    AL ++  M+   V+P+  TF  ++ A S +  +++G   
Sbjct: 692 -DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISY 750

Query: 616 HANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHG 673
             ++ +  +    P     +VD+  + G +  A    ++M ++ + ++W  +L     H 
Sbjct: 751 FRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHK 810

Query: 674 NGEETLKLFEDMKAHGVE---PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           N    + + E   +H +E    DS T++ V +  + +G          +M+++ G++ E
Sbjct: 811 N----IDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDR-GVKKE 864



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 137/586 (23%), Positives = 242/586 (41%), Gaps = 121/586 (20%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
            GK  H  +L      + ++ N L+T+YSR G+L  A ++F  M  RD +S+NS+++  A
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G      +     LF+ +         +T+A LL  C S G +   +  H YA+K G+
Sbjct: 329 QQGY-----INRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  V G+L+++Y K   I+ A   F    + D +                + F +F  
Sbjct: 384 TSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNL---------------NKSFQIFTQ 428

Query: 251 LHRSGLCPDDESVQCVLGVI-----SDLGKRHEEQVQA---------------------- 283
           +   G+ P+  +   +L        +DLG++   QV                        
Sbjct: 429 MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGK 488

Query: 284 --YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
             +A+K+      ++VV W   ++GY Q      A+  F  M    ++ D++ F  A++A
Sbjct: 489 LDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISA 548

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------ 383
            AG   L+ G+QIH  +  SG+   + +GN+L+++Y++ G V                  
Sbjct: 549 CAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSW 608

Query: 384 -------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                     GL  + FT  S + A++++   + + KQIH    
Sbjct: 609 NSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIAN-VRIGKQIHGMIR 667

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           K    +++ VS ALI +Y + G++             D  +WN+MI GY       +AL+
Sbjct: 668 KTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALK 714

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGI 533
           LF  M       + +T    + AC  + ++ +G         A+ +    E   CV    
Sbjct: 715 LFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACV---- 770

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-----VDNGE 573
           +D+  + G +  A+    ++P  PD + W T++S C     +D GE
Sbjct: 771 VDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGE 816



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 25/218 (11%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           + S F +  Y     F  +L  F Q +      +S  + S +  A + +++ +GK  H  
Sbjct: 611 LVSGFAQSGY-----FEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGM 665

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I  +    +  ++N L+T+Y++CG++             D ISWNS++  Y+  G G   
Sbjct: 666 IRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCG--- 709

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVS 197
              E  +LF  +++     + +T   +L  C   G V          +    LV      
Sbjct: 710 --FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHY 767

Query: 198 GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             +V++  + G +  AK   + M  + D ++W+ +L A
Sbjct: 768 ACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSA 805


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 275/906 (30%), Positives = 456/906 (50%), Gaps = 95/906 (10%)

Query: 1   MYTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL 60
           ++ +LQ+N+ P    +  I S    +   N  S   ++LP     HF S  + S      
Sbjct: 5   IHKKLQSNILPSACRS--ISSLAVTENSENFHSTHDTVLPPFDPFHFFSDYTKSG----- 57

Query: 61  RHAISTSDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           R  +  + +L     HA  L ++ +  + F+TN+LM  Y +  S+V+A RLFDK P  ++
Sbjct: 58  RCTLRNTKIL-----HAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNV 112

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           ISWN ++     SG     +  + +R F  +R S    ++ T   +L  C + G     E
Sbjct: 113 ISWNILI-----SGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGE 167

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            V+  ALK G   + +V   ++++++K     +A  +F  +   +VV W  ++    +N 
Sbjct: 168 LVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNR 227

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAY-------------- 284
                  LF  +      P+  +   +L   + L +      VQ +              
Sbjct: 228 ENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGT 287

Query: 285 --------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                         A+K  L     NVV W   +SG++Q  D+  A   F  M +   + 
Sbjct: 288 AIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKI 347

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------ 384
           ++ T    L A      +    Q+H    K+GFY    V ++LINMYSK+G V       
Sbjct: 348 NNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVF 407

Query: 385 --------------------------------------GLRTDQFTLASVLRASSSLPEG 406
                                                 GLR D+F  +SVL    S+ + 
Sbjct: 408 REMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL----SIIDS 463

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L L + IH + +K     D  V ++L  +Y + GS+ E+  +FE     D  +W +MI G
Sbjct: 464 LSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITG 523

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           +   +++ +A++LF  M     R D++T+  A+ AC  L  L++GK++H YA+++    +
Sbjct: 524 FSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKE 583

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           + V   +++MY KCGA+V A+ +F+ +P  D  + ++++SG   NG  + AL ++H++R+
Sbjct: 584 VLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRM 643

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           + +  D FT + ++ A + L +L+ G Q+HA + K+  +++  VG SLV MY+KCG+I++
Sbjct: 644 ADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDE 703

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
            + +F+Q++  + + W AM+V  AQHG G E LK+++ M+  G +PDSVTF+GVLSACS+
Sbjct: 704 CHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSH 763

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            G+V E Y + + M ++YGIEP   HY+ +VD LGR+GR KEA   I +MP E  A +  
Sbjct: 764 NGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWG 823

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
            LL AC+V GD E G+  A++++ LEP ++ AYV LSNI A    W+DV   R  M+   
Sbjct: 824 ILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTG 883

Query: 827 VKKDPA 832
           VKK+P 
Sbjct: 884 VKKEPG 889


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 280/822 (34%), Positives = 411/822 (50%), Gaps = 125/822 (15%)

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD   ++ +     +L  ++ N   +E  +LF+ L RSG   D  S+ CVL V   L  
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 276 R-HEEQVQAYAIKLLLYNNNS----------------------------NVVLWNKKLSG 306
           R   +QV    IK     + S                            NVV W   L+G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q G N  A++ F  M    ++ +  TF   L  +A    +  G Q+H   +KSG  S 
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 367 VIVGNSLINMYSKMGCVC------------------------------------------ 384
           + VGNS++NMYSK   V                                           
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 385 -GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G++  Q   A+V++  +++ E +  +KQ+H   IKN +  D  + TAL+  Y +   + 
Sbjct: 288 EGVKLTQTIFATVIKLCANIKE-MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 444 EAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           +A  LF    G  ++ +W A+I GY+ +  + +A+ LF  M   G R +  T +T + A 
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             +       Q+HA  +K+ +E    V + + D Y K G   +A  IF  I   D VAW+
Sbjct: 407 AAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWS 462

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIHANLIK 621
            M+SG    G+ + A+ I+ Q+   GV P+EFTF+ ++ A +  TA +EQG+Q H+  IK
Sbjct: 463 AMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 522

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
              S+   V  +LV MYAK GNIE A  +FK+   R+ V WN+M+ G AQHG G+++LK+
Sbjct: 523 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKI 582

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE+M++  +E D +TFIGV+SAC++ GLV+E    F LM + Y I P +EHYS +VD   
Sbjct: 583 FEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYS 642

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG  ++A +LI  MPF A A++ R LL ACRV  + + G+  AEKL++L+P DS+AYVL
Sbjct: 643 RAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVL 702

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI+A A  W +    R  M  K VKK+                        +D I+ K
Sbjct: 703 LSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLK 762

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           +E L  R+K+ GY PDT +VL DVEEE KE  L  HSE+LA A+GLI+TPP + I     
Sbjct: 763 LEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKN 822

Query: 894 ----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                           +  ++ +   +NRFHH + G C C D
Sbjct: 823 LRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGD 864



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/646 (25%), Positives = 280/646 (43%), Gaps = 88/646 (13%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
           ++++LFD+ P + L   N +L  ++ + +       E   LF  LR S + T   +L+ +
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNK-----EALNLFLGLRRSGSPTDGSSLSCV 98

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LK+C         + VH   +K G V D  V  +LV++Y K   + + + +FD M+ ++V
Sbjct: 99  LKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV 158

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------- 278
           V W  +L  Y +NG  E+   LF  +   G+ P+  +   VLG ++  G   +       
Sbjct: 159 VSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTM 218

Query: 279 --------------EQVQAYAIKLLLYN--------NNSNVVLWNKKLSGYLQVGDNHGA 316
                           V  Y+  L++ +         N N V WN  ++G++  G +  A
Sbjct: 219 VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEA 278

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
            E F  M    V+     F   +   A    ++  +Q+H   +K+G    + +  +L+  
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338

Query: 377 YSK---------------------------------------MGCVC-----GLRTDQFT 392
           YSK                                       M   C     G+R + FT
Sbjct: 339 YSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFT 398

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
            +++L A++++        QIH   +K +      V TAL D Y + G   EA  +FE  
Sbjct: 399 YSTILTANAAVS-----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELI 453

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC-LLMLKQG 511
           D  D+  W+AM+ GY    +   A+++F  +   G   +E T ++ + AC      ++QG
Sbjct: 454 DEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG 513

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           KQ H+ ++KSGF   LCVSS ++ MY K G +  A  +F      D V+W +MISG   +
Sbjct: 514 KQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQH 573

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G    +L I+ +MR   +  D  TF  ++ A +    + +G Q + +L+  D    P + 
Sbjct: 574 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG-QRYFDLMVKDYHIVPTME 632

Query: 632 --ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN 674
               +VD+Y++ G +E A  L  +M       +W  +L     H N
Sbjct: 633 HYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 678



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 261/613 (42%), Gaps = 94/613 (15%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L+L   L++S   S +  S    +L+      D ++GK  H + +    + D  +  +L
Sbjct: 76  ALNLFLGLRRS--GSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY +  S+    R+FD+M  ++++SW S+LA Y  +G        +  +LF  ++   
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNE-----QALKLFSQMQLEG 188

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  T A +L    + G V     VH   +K GL    FV  ++VN+YSK   + +AK
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M+ R+ V W  M+  +  NG   E F LF  +   G+         V+ + +++ 
Sbjct: 249 AVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIK 308

Query: 275 K-RHEEQVQAYAIK-------------LLLYNNNS----------------NVVLWNKKL 304
           +    +Q+    IK             ++ Y+  S                NVV W   +
Sbjct: 309 EMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAII 368

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           SGY+Q G    A+  F  M R  V+ +  T+   L A A         QIH   +K+ + 
Sbjct: 369 SGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVS----PSQIHALVVKTNYE 424

Query: 365 SAVIVGNSLINMYSKMG------------------------------------------- 381
           ++  VG +L + YSK+G                                           
Sbjct: 425 NSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQL 484

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
              G+  ++FT +SVL A ++    +   KQ H  +IK+       VS+AL+ +Y + G+
Sbjct: 485 AKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGN 544

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +  A  +F+ +   DL +WN+MI GY       K+L++F  M +    LD IT    + A
Sbjct: 545 IESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISA 604

Query: 502 CGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           C    ++ +G++     +  Y +    E   C    ++D+Y + G +  A  + N +P P
Sbjct: 605 CTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC----MVDLYSRAGMLEKAMDLINKMPFP 660

Query: 557 DDVA-WTTMISGC 568
                W T+++ C
Sbjct: 661 AGATIWRTLLAAC 673



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 169/312 (54%), Gaps = 1/312 (0%)

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           ++ LF+      L+  N ++F +  ++ + +AL LF  +  SG   D  +++  +K CGC
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L     GKQ+H   +K GF  D+ V + ++DMY+K  ++ D + +F+++   + V+WT++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ++G   NG  + AL ++ QM+L G+ P+ FTFA ++   +   A+E+G Q+H  +IK   
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            S  FVG S+V+MY+K   + DA  +F  M+ RN V WN+M+ G   +G   E  +LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  GV+     F  V+  C+    +S A +  H    K G + ++   + L+ A  +  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFA-KQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 745 RTKEAGELILSM 756
              +A +L   M
Sbjct: 344 EIDDAFKLFCMM 355


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 280/943 (29%), Positives = 452/943 (47%), Gaps = 130/943 (13%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY++ G +  AR LFD MP R+ +SWN++++     G        EG   FR + +    
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGL-----YLEGMEFFRKMCDLGIK 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
            S   +A L+  C  SG ++     VHG+  K GL+ D +VS A++++Y  +G +  ++ 
Sbjct: 56  PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISD 272
           +F+ M +R+VV W  ++  Y++ G  EEV  ++  +   G+  ++ S+  V+   G++ D
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175

Query: 273 --LGKRHEEQVQAYAIKLLLYNNNS------------------------NVVLWNKKLSG 306
             LG++   QV    ++  L   NS                        + + WN   + 
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q G    +   F  M R + + +S T    L+ +   D+   G+ IHG  +K GF S 
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295

Query: 367 VIVGNSLINMYS--------------------------------------KMGCVC---- 384
           V V N+L+ MY+                                       +G +C    
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355

Query: 385 -GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G   +  T  S L A  + P+     + +H   + +    +  +  AL+ +Y + G M+
Sbjct: 356 SGKSVNYVTFTSALAACFT-PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           E+  +       D+  WNA+I GY    +  KAL  F  M   G   + IT+ + + AC 
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC- 473

Query: 504 CLL---MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
            LL   +L++GK +HAY + +GFE D  V + ++ MY KCG +  +Q +FN +   + + 
Sbjct: 474 -LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  M++    +G  +  L +  +MR  GV  D+F+F+  + A++ L  LE+G+Q+H   +
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           KL    D F+  +  DMY+KCG I +   +      R+   WN ++  L +HG  EE   
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
            F +M   G++P  VTF+ +L+ACS+ GLV +    + ++   +G+EP +EH   ++D L
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 712

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
           GR+GR  EA   I  MP + +  + R+LL +C++ G+ + G+  AE L  LEP D S YV
Sbjct: 713 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 772

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKD----------------------PADL-IFA 837
           L SN+FA   +W+DV + R +M  KN+KK                       P  + I+A
Sbjct: 773 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 832

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV----- 892
           K+E + K IKE GYV DT   L D +EE+KE  L+ HSE+LA AY L+STP  S      
Sbjct: 833 KLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFK 892

Query: 893 ---ILSNKEPLYA---------------NRFHHLRDGMCPCAD 917
              I S+   +Y                 RFHH   G+C C D
Sbjct: 893 NLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKD 935



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 164/699 (23%), Positives = 311/699 (44%), Gaps = 81/699 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  +  S  + D +++  ++ +Y   G +  +R++F++MPDR+++SW S++  Y+ 
Sbjct: 78  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            GE   E V +   +++ +R      +  +++ ++  C           + G  +K GL 
Sbjct: 138 KGE--PEEVID---IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 192

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V  +L+++    G +  A ++FD M ERD + W  +  AYA+NG  EE F +F  +
Sbjct: 193 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252

Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKL---------------------- 288
            R     +  +V  +L V+  +  ++    +    +K+                      
Sbjct: 253 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312

Query: 289 ----LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               L++      +++ WN  ++ ++  G +  A+    +MI S    + VTF  ALAA 
Sbjct: 313 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
              D    G+ +HG  + SG +   I+GN+L++MY K+G                     
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                  V G+ ++  T+ SVL A     + L   K +H + + 
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +D  V  +LI +Y + G ++ ++ LF   D  ++ TWNAM+       +  + L+L
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
            S M + G  LD+ + +  + A   L +L++G+Q+H  A+K GFE D  + +   DMY K
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG + +   +          +W  +IS    +G  +   + +H+M   G+ P   TF  L
Sbjct: 613 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR 657
           + A S    +++G   + ++I  D   +P +   I ++D+  + G + +A     +M M+
Sbjct: 673 LTACSHGGLVDKGLAYY-DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 731

Query: 658 -NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            N ++W ++L     HGN +   K  E++     E DSV
Sbjct: 732 PNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 153/678 (22%), Positives = 274/678 (40%), Gaps = 129/678 (19%)

Query: 64  ISTSDLL----LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           IS+  LL    LG+    +++ S       + N+L++M    G++ YA  +FD+M +RD 
Sbjct: 167 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 226

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           ISWNSI AAYA +G     ++ E FR+F  +R      +  T++ LL +     +     
Sbjct: 227 ISWNSIAAAYAQNG-----HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            +HG  +K+G      V   L+ +Y+  G+  EA  +F  M  +D++ W  ++ ++  +G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341

Query: 240 FGEEVFHLFVDLHRSG---------------LCPD-DESVQCVLGVISDLGKRHEEQV-- 281
              +   L   +  SG                 PD  E  + + G++   G  + + +  
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401

Query: 282 -----------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                       + + ++LL     +VV WN  + GY +  D   A+  F  M    V  
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461

Query: 331 DSVTFLVALAA-VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----- 384
           + +T +  L+A +   D L  G+ +H   + +GF S   V NSLI MY+K G +      
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521

Query: 385 --------------------------------------GLRTDQFTLASVLRASSSLPEG 406
                                                 G+  DQF+ +  L A++ L   
Sbjct: 522 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV- 580

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L   +Q+H  A+K     DSF+  A  D+Y + G + E   +        L +WN +I  
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKS 521
                   +    F  M   G +   +T  + + AC    ++ +G   +      + ++ 
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
             E  +CV    +D+  + G + +A++  + +P  P+D+ W ++++ C  +G        
Sbjct: 701 AIEHCICV----IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN------- 749

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
                                       L++GR+   NL KL+   D    +S  +M+A 
Sbjct: 750 ----------------------------LDRGRKAAENLSKLEPEDDSVYVLS-SNMFAT 780

Query: 641 CGNIEDAYILFKQMDMRN 658
            G  ED   + KQM  +N
Sbjct: 781 TGRWEDVENVRKQMGFKN 798


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 282/968 (29%), Positives = 466/968 (48%), Gaps = 130/968 (13%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            G++ HA  +          TN L+ MY++ G +  AR LFDKMP R+ +SWN++++    
Sbjct: 77   GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 132  SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET-VHGYALKIGL 190
             G        EG   F+ + +     S   +A L+  C  SG ++     VHG+  K GL
Sbjct: 137  VGL-----YLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 191

Query: 191  VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            + D +VS A++++Y  +G +  ++ +F+ M +R+VV W  ++  Y++ G  EEV  ++  
Sbjct: 192  LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKS 251

Query: 251  LHRSGLCPDDESVQCVL---GVISD--LGKRHEEQVQAYAIK---------LLLYNNNSN 296
            +   G+  ++ S+  V+   G++ D  LG++   QV    ++         + ++ N  N
Sbjct: 252  MRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGN 311

Query: 297  V---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
            V               + WN  ++ Y Q G    +   F  M R + + +S T    L+ 
Sbjct: 312  VDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSV 371

Query: 342  VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS----------------------- 378
            +   D+   G+ IHG  +K GF S V V N+L+ MY+                       
Sbjct: 372  LGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISW 431

Query: 379  ---------------KMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                            +G +C     G   +  T  S L A  S PE     + +H   +
Sbjct: 432  NSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFS-PEFFDKGRILHGLVV 490

Query: 419  KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
             +    +  +  AL+ +Y + G M+ +  +       D+  WNA+I GY  + +  KAL 
Sbjct: 491  VSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALA 550

Query: 479  LFSHMHTSGERLDEITIATAVKACGCLL---MLKQGKQMHAYAMKSGFELDLCVSSGILD 535
             F  +   G   + IT+ + + AC  L+   +L++GK +HAY + +GFE D  V + ++ 
Sbjct: 551  AFQTLRVEGVSANYITVVSVLSAC--LVPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 608

Query: 536  MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            MY KCG +  +Q +FN +     + W  +++    +G  +  L +  +MR  G+  D+F+
Sbjct: 609  MYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFS 668

Query: 596  FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            F+  + A++ L  LE+G+Q+H   +KL    D F+  +  DMY+KCG I +   +     
Sbjct: 669  FSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSV 728

Query: 656  MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             R+   WN ++  L +HG  EE  + F +M   G++P  VTF+ +L+ACS+ GLV +   
Sbjct: 729  NRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLA 788

Query: 716  NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
             + ++ + +G+EP +EH   ++D LGR+GR  EA   I  MP + +  + R+LL +C++ 
Sbjct: 789  YYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 848

Query: 776  GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----- 830
             D + G+  AE L  LEP D S +VL SN+FA   +W+DV + R +M  KN+KK      
Sbjct: 849  RDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 908

Query: 831  -----------------PADL-IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                             P  + I+AK+E + K IKE GYV DT   L D +EE+KE  L+
Sbjct: 909  VKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLW 968

Query: 873  YHSEKLARAYGLISTPPSSV--------ILSNKEPLYA---------------NRFHHLR 909
             HSE+LA AY L+STP  S         I S+   +Y                 RFHH  
Sbjct: 969  NHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFE 1028

Query: 910  DGMCPCAD 917
             G+C C D
Sbjct: 1029 SGLCSCKD 1036



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 154/679 (22%), Positives = 276/679 (40%), Gaps = 131/679 (19%)

Query: 64  ISTSDLL----LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           IS+  LL    LG+    +++ S       + N+L++M+   G++ YA  +F+++ +RD 
Sbjct: 268 ISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDT 327

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           ISWNSI+AAYA +G     ++ E  R+F  +R      +  T++ LL +     +     
Sbjct: 328 ISWNSIVAAYAQNG-----HIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGR 382

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            +HG  +K+G      V   L+ +Y+  G+  EA  +F  M  +D++ W  ++ ++  +G
Sbjct: 383 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDG 442

Query: 240 FGEEVFHLFVDLHRSG---------------LCP---DDESVQCVLGVISDLGKRHEEQV 281
              +   +   + R+G                 P   D   +   L V+S L    + Q+
Sbjct: 443 RSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGL---FDNQI 499

Query: 282 QAYAI--------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
              A+              ++LL     +VV WN  + GY +  D   A+  F  +    
Sbjct: 500 IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEG 559

Query: 328 VQYDSVTFLVALAA-VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-- 384
           V  + +T +  L+A +   D L  G+ +H   + +GF S   V NSLI MY+K G +   
Sbjct: 560 VSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 619

Query: 385 -----------------------------------------GLRTDQFTLASVLRASSSL 403
                                                    GL  DQF+ +  L A++ L
Sbjct: 620 QDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKL 679

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L   +Q+H  A+K     D F+  A  D+Y + G + E   +        L +WN +
Sbjct: 680 AV-LEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 738

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-G 522
           I          +  E F  M   G +   +T  + + AC    ++ QG   +    K  G
Sbjct: 739 ISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFG 798

Query: 523 FE--LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            E  ++ C+   ++D+  + G + +A++  + +P  P+D+ W ++++ C           
Sbjct: 799 LEPAIEHCIC--VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC----------K 846

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           I+                           L++GR+   NL KL+   D    +S  +M+A
Sbjct: 847 IHRD-------------------------LDRGRKAAENLSKLEPEDDSVFVLS-SNMFA 880

Query: 640 KCGNIEDAYILFKQMDMRN 658
             G  ED   + KQM  +N
Sbjct: 881 TTGRWEDVENVRKQMGFKN 899



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 198/426 (46%), Gaps = 29/426 (6%)

Query: 300 WNKKLSGYLQVGDNHGAIE---------CFVNMIRSNVQYDS--VTFLVALAAVAGT--- 345
           WN +LS + Q G +    E         C   ++R +V + +  +        V      
Sbjct: 56  WNPELSCFDQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYL 115

Query: 346 -DNLNLGQQIHGTTLKSGFYSAVIVGNSLINM--YSKMGCVCGLRTDQFTLASVL----R 398
            D + +  ++   T+ SG    V VG  L  M  + KM C  G++   F +AS++    R
Sbjct: 116 FDKMPVRNEVSWNTMMSGI---VRVGLYLEGMEFFQKM-CDLGIKPSSFVIASLVTACGR 171

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           + S   EG+    Q+H    K+  ++D +VSTA++ +Y   G ++ +  +FE     ++ 
Sbjct: 172 SGSMFREGV----QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 227

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           +W +++ GY       + ++++  M   G   +E +++  + +CG L     G+Q+    
Sbjct: 228 SWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQV 287

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           +KSG E  L V + ++ M+   G +  A  IFN I   D ++W ++++    NG  + + 
Sbjct: 288 IKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESS 347

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
            I++ MR      +  T + L+     +   + GR IH  ++K+   S   V  +L+ MY
Sbjct: 348 RIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 407

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           A  G  E+A ++FKQM  ++ + WN+++      G   + L +   M   G   + VTF 
Sbjct: 408 AGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFT 467

Query: 699 GVLSAC 704
             L+AC
Sbjct: 468 SALAAC 473



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%)

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           S +T    GR +HA  +K           +L++MY K G ++ A  LF +M +RN V WN
Sbjct: 69  SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            M+ G+ + G   E ++ F+ M   G++P S     +++AC  +G +       H    K
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            G+  +V   + ++   G  G    + ++   MP
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 222


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 270/873 (30%), Positives = 422/873 (48%), Gaps = 121/873 (13%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--E 222
           +LK C+    + A   VH + ++   V D++   AL+N+Y + G I EA+ ++  +   E
Sbjct: 29  MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK---RHEE 279
           R V  W  M+  Y + G+ E+   L   + + GL PD  ++   L      G      E 
Sbjct: 89  RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 280 QVQAYAIKLLLYNNNSNVVL--------------------------WNKKLSGYLQVGDN 313
             QA    LL     +N +L                          W   + GY   G +
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A E F  M +  V  + +T++  L A +    L  G+ +H   L +G  S   VG +L
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTAL 268

Query: 374 INMYSKMGCV--C-----------------------------------------GLRTDQ 390
           + MY+K G    C                                         G+  ++
Sbjct: 269 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNK 328

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T   +L A  +    LH  K+IH    K    +D  V  ALI +Y R GS+ +A  +F+
Sbjct: 329 ITYVILLNACVN-SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD 387

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D+ +W AMI G   S    +AL ++  M  +G   + +T  + + AC     L+ 
Sbjct: 388 KMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEW 447

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+++H   +++G   D  V + +++MY  CG++ DA+ +F+ +   D VA+  MI G   
Sbjct: 448 GRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAA 507

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +     AL ++ +++  G+ PD+ T+  ++ A +   +LE  R+IH  + K    SD  V
Sbjct: 508 HNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSV 567

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +LV  YAKCG+  DA I+F++M  RN + WNA++ G AQHG G++ L+LFE MK  GV
Sbjct: 568 GNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGV 627

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +PD VTF+ +LSACS+ GL+ E    F  M + + I P +EHY  +VD LGRAG+  EA 
Sbjct: 628 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAE 687

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
            LI +MPF+A+  +  ALLGACR+ G+    +  AE  + L+  ++  YV LS+++AAA 
Sbjct: 688 ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAG 747

Query: 811 QWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIK 847
            WD     R  M+++ V K+P                       ++ I+A+++ L   +K
Sbjct: 748 MWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMK 807

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
             GYVPDT  V+ DV+E EKE A+ +HSE+LA AYGLISTPP + I              
Sbjct: 808 MKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHT 867

Query: 894 -------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                  + ++E +    NRFHH +DG+C C D
Sbjct: 868 ATKFISKIVDREIIARDVNRFHHFKDGVCSCGD 900



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 200/779 (25%), Positives = 357/779 (45%), Gaps = 102/779 (13%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ ++ +LQ+    +  +SS +  +L+  I   DL+ G+  H  I+    +PD++  N L
Sbjct: 7   AVDVVQYLQQQ--GAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64

Query: 95  MTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           + MY +CGS+  AR+++ K+   +R + SWN+++  Y   G      + +  +L R +++
Sbjct: 65  INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYG-----YIEKALKLLRQMQQ 119

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                 R T+   L  C S G +     +H  A++ GL++D  V+  ++N+Y+K G I E
Sbjct: 120 HGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEE 179

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ +FD M+++ VV W + +  YA+ G  E  F +F  + + G+ P+  +   VL   S 
Sbjct: 180 AREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239

Query: 273 --------------LGKRHEEQVQAYAIKLLLYNN---------------NSNVVLWNKK 303
                         L   HE         + +Y                 N +++ WN  
Sbjct: 240 PAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 299

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + G  + G    A E +  M R  V  + +T+++ L A   +  L+ G++IH    K+GF
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359

Query: 364 YSAVIVGNSLINMYSKMGCV---------------------------------------- 383
            S + V N+LI+MYS+ G +                                        
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419

Query: 384 ---CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G+  ++ T  S+L A SS P  L   ++IH   ++     D+ V   L+++Y   G
Sbjct: 420 MQQAGVEPNRVTYTSILNACSS-PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCG 478

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           S+ +A  +F+     D+  +NAMI GY   N   +AL+LF  +   G + D++T    + 
Sbjct: 479 SVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 538

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC     L+  +++H    K GF  D  V + ++  Y KCG+  DA  +F  +   + ++
Sbjct: 539 ACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVIS 598

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  +I G   +G    AL ++ +M++ GV PD  TF  L+ A S    LE+GR+   ++ 
Sbjct: 599 WNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMS 658

Query: 621 KLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN--- 674
           + D +  P +     +VD+  + G +++A  L K M  + NT +W A+L     HGN   
Sbjct: 659 Q-DFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPV 717

Query: 675 ----GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
                E +LKL  D        ++V ++ +    +  G+   A +   LM E+ G+  E
Sbjct: 718 AERAAESSLKLDLD--------NAVVYVALSHMYAAAGMWDSAAKLRKLM-EQRGVTKE 767



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           E+D A+ +   ++  G   +   +  ++K    +  L  GRQ+H ++I+     D +   
Sbjct: 3   EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62

Query: 633 SLVDMYAKCGNIEDAYILFKQMD-MRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           +L++MY +CG+IE+A  ++K++  M  TV  WNAM+VG  Q+G  E+ LKL   M+ HG+
Sbjct: 63  ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            PD  T +  LS+C   G +    E  H    + G+  +V+  + +++   + G  +EA 
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGRE-IHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL--MALEPFDSSAYVLLSNIFA- 807
           E+   M  ++  S    + G     G +ET   + +K+    + P +   Y+ + N F+ 
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADC-GRSETAFEIFQKMEQEGVVP-NRITYISVLNAFSS 239

Query: 808 -AANQWDDVTSAR 819
            AA +W     +R
Sbjct: 240 PAALKWGKAVHSR 252



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 17/211 (8%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           NL   +L L   LQ+        +  + ++L    ++  L   +  H  +       D  
Sbjct: 509 NLGKEALKLFDRLQEEGLKPDKVT--YINMLNACANSGSLEWAREIHTLVRKGGFFSDTS 566

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N L++ Y++CGS   A  +F+KM  R++ISWN+I+   A  G G      +  +LF  
Sbjct: 567 VGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQ-----DALQLFER 621

Query: 150 LRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           ++        +T   LL  C     L  G  +       +A+   +  + +  G +V++ 
Sbjct: 622 MKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTI--EHY--GCMVDLL 677

Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            + G++ EA+ L   M  + +  +W  +L A
Sbjct: 678 GRAGQLDEAEALIKTMPFQANTRIWGALLGA 708


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 259/754 (34%), Positives = 389/754 (51%), Gaps = 96/754 (12%)

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           R G+ P+      +L + +  G  +E      A +L    +N +VV WN  +SGY   G 
Sbjct: 56  RCGVKPNVYITNTLLKLYAHCGSVNE------ARQLFDKFSNKSVVSWNVMISGYAHRGL 109

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A   F  M +  ++ D  TF+  L+A +    LN G++IH   +++G  +   VGN+
Sbjct: 110 AQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNA 169

Query: 373 LINMYSKMGCVCG-------------------------------------------LRTD 389
           LI+MY+K G V                                             +R  
Sbjct: 170 LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPS 229

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           + T  +VL A  SL   L   KQIH H ++++  +D  VSTAL  +Y + G+  +A  +F
Sbjct: 230 RITYMNVLSACGSLA-ALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVF 288

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E     D+  WN MI G++ S    +A   F  M   G   D  T  T + AC     L 
Sbjct: 289 ECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLA 348

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           +GK++HA A K G   D+   + +++MY K G+M DA+ +F+ +P  D V+WTT++    
Sbjct: 349 RGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYA 408

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
           D  +   + + + QM   GV  ++ T+  ++KA S   AL+ G++IHA ++K    +D  
Sbjct: 409 DCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLA 468

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           V  +L+ MY KCG++EDA  +F+ M MR+ V WN ++ GL Q+G G E L+ +E MK+ G
Sbjct: 469 VTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEG 528

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           + P++ TF+ VLSAC    LV E    F  M + YGI P  +HY+ +VD L RAG  +EA
Sbjct: 529 MRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREA 588

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            ++IL++P + SA+M  ALL ACR+  + E G+  AE  + LEP ++  YV LS I+AAA
Sbjct: 589 EDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAA 648

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
             W DV   R  MK + VKK+P                          I+A++E L K++
Sbjct: 649 GMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQM 708

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           K  GYVPDT FV+ D+++E KERA+ +HSEKLA AYGLISTPP + I             
Sbjct: 709 KSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCH 768

Query: 894 --------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                   ++ +E +   A+RFHH ++G C C D
Sbjct: 769 TATKFISKITKREIIARDAHRFHHFKNGECSCGD 802



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 265/591 (44%), Gaps = 82/591 (13%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  +  +L+  +   DL +GK  H  IL     P+ ++TN L+ +Y+ CGS+  AR+LFD
Sbjct: 28  SYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFD 87

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           K  ++ ++SWN +++ YAH G        E F LF  +++      + T   +L  C S 
Sbjct: 88  KFSNKSVVSWNVMISGYAHRGLAQ-----EAFNLFTLMQQERLEPDKFTFVSILSACSSP 142

Query: 173 GYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
             + W  E +H   ++ GL  D  V  AL+++Y+K G +R+A+ +FD M  RD V W  +
Sbjct: 143 AVLNWGRE-IHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 201

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLL 290
             AYAE+G+GEE    +  + +  + P   +   VL     L    + +Q+ A+ ++   
Sbjct: 202 TGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEY 261

Query: 291 YNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
           +++                              +V+ WN  + G++  G    A   F  
Sbjct: 262 HSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHR 321

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+   V  D  T+   L+A A    L  G++IH    K G  S V  GN+LINMYSK G 
Sbjct: 322 MLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGS 381

Query: 383 V---------------------------C----------------GLRTDQFTLASVLRA 399
           +                           C                G++ ++ T   VL+A
Sbjct: 382 MKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKA 441

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            S+ P  L   K+IH   +K   +AD  V+ AL+ +Y + GS+ +A  +FE     D+ T
Sbjct: 442 CSN-PVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVT 500

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN +I G   +    +AL+ +  M + G R +  T    + AC    ++++G++  A+  
Sbjct: 501 WNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMS 560

Query: 520 KS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           K  G        + ++D+  + G + +A+ +   IP  P    W  +++ C
Sbjct: 561 KDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAAC 611



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 193/373 (51%), Gaps = 2/373 (0%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G + D +    +L+ S    + L + KQ+H H ++     + +++  L+ +Y   GS+ E
Sbjct: 23  GPQVDSYDYVKLLQ-SCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNE 81

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+      + +WN MI GY     + +A  LF+ M       D+ T  + + AC  
Sbjct: 82  ARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSS 141

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
             +L  G+++H   M++G   D  V + ++ MY KCG++ DA+ +F+ + + D+V+WTT+
Sbjct: 142 PAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 201

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
                ++G  + +L  YH M    V P   T+  ++ A   L ALE+G+QIHA++++ + 
Sbjct: 202 TGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEY 261

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            SD  V  +L  MY KCG  +DA  +F+ +  R+ + WN M+ G    G  EE    F  
Sbjct: 262 HSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHR 321

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   GV PD  T+  VLSAC+  G ++   E  H    K G+  +V   + L++   +AG
Sbjct: 322 MLEEGVAPDRATYTTVLSACARPGGLARGKE-IHARAAKDGLVSDVRFGNALINMYSKAG 380

Query: 745 RTKEAGELILSMP 757
             K+A ++   MP
Sbjct: 381 SMKDARQVFDRMP 393



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 174/385 (45%), Gaps = 36/385 (9%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           +R L   + +L   +Q+        +  + SIL    S + L  G+  H R++ +    D
Sbjct: 106 HRGLAQEAFNLFTLMQQERLEPDKFT--FVSILSACSSPAVLNWGREIHVRVMEAGLAND 163

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             + N L++MY++CGS+  ARR+FD M  RD +SW ++  AYA SG G      E  + +
Sbjct: 164 TTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGE-----ESLKTY 218

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
            ++ +     SR+T   +L  C S   +   + +H + ++     D  VS AL  +Y K 
Sbjct: 219 HAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC 278

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G  ++A+ +F+ +  RDV+ W  M+R + ++G  EE    F  +   G+ PD  +   VL
Sbjct: 279 GAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338

Query: 268 GVISDLGK-RHEEQVQAYAIKLLLYNN----------------------------NSNVV 298
              +  G     +++ A A K  L ++                              +VV
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 398

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W   L  Y        +   F  M++  V+ + +T++  L A +    L  G++IH   
Sbjct: 399 SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV 458

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV 383
           +K+G  + + V N+L++MY K G V
Sbjct: 459 VKAGLLADLAVTNALMSMYFKCGSV 483



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 147/283 (51%), Gaps = 3/283 (1%)

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           ++  ++H  G ++D       +++C     L  GKQ+H + ++ G + ++ +++ +L +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
             CG++ +A+ +F+       V+W  MISG    G    A +++  M+   + PD+FTF 
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ A S    L  GR+IH  +++   ++D  VG +L+ MYAKCG++ DA  +F  M  R
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-N 716
           + V W  +    A+ G GEE+LK +  M    V P  +T++ VLSAC     + +  + +
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            H++  +Y    +V   + L     + G  K+A E+   + + 
Sbjct: 254 AHIVESEY--HSDVRVSTALTKMYMKCGAFKDAREVFECLSYR 294


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 261/875 (29%), Positives = 421/875 (48%), Gaps = 120/875 (13%)

Query: 162 LAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           L   L+ C   G  W     +H  ++  GL  D  +   L+++Y+K G + +A+ +F  +
Sbjct: 45  LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVISDLGK 275
             RD V W  ML  YA++G G+E F L+  +H + + P    +      C  G +   G+
Sbjct: 105 SSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGR 164

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLW------------------------NKKLSGYLQVG 311
               QV   A     +  N+ + L+                        N  +SG+ Q G
Sbjct: 165 MIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCG 224

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A++ F  M  S ++ D VT    LAA A   +L  G+Q+H   LK+G     I   
Sbjct: 225 HGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEG 284

Query: 372 SLINMYSKMGCV-------------------------------------------CGLRT 388
           SL+++Y K G +                                            G+  
Sbjct: 285 SLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHP 344

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +QFT   +LR  +   + + L +QIH  +IKN   +D +VS  LID+Y + G + +A  +
Sbjct: 345 NQFTYPCILRTCTCTGQ-IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKI 403

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            E  +  D+ +W +MI GY+  +   +AL  F  M   G   D I +A+A  AC  +  +
Sbjct: 404 LEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAM 463

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +QG Q+HA    SG+  D+ + + ++++Y +CG   +A S+F +I   D++ W  +ISG 
Sbjct: 464 RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGF 523

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +     AL ++ +M  +G   + FTF   + A + L  ++QG+Q+H   +K   +S+ 
Sbjct: 524 GQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSET 583

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L+ +Y KCG+IEDA ++F +M +RN V WN ++   +QHG G E L LF+ MK  
Sbjct: 584 EVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQE 643

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G++P+ VTFIGVL+ACS+ GLV E    F  M   YG+ P  +HY+ +VD LGRAG+   
Sbjct: 644 GLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDR 703

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A   +  MP  A+A + R LL AC+V  + E G+  A+ L+ LEP DS++YVLLSN +A 
Sbjct: 704 ARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAV 763

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
             +W +    R  MK + ++K+P                       +D I+  +  L  R
Sbjct: 764 TGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDR 823

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------ 893
           + + GY  +   +  + E+E+K+   + HSEKLA A+GL++ PP   +            
Sbjct: 824 LSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDC 883

Query: 894 ---------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                    ++ +E +  +  RFHH   G C C D
Sbjct: 884 HSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGD 918



 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 191/722 (26%), Positives = 334/722 (46%), Gaps = 92/722 (12%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           DR + N L+ +Y++ G +  AR++F ++  RD +SW ++L+ YA SG G      E FRL
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGK-----EAFRL 131

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +  +  +    +   L+ +L  C           +H    K     + FV  AL+ +Y  
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           FG  + A+ +F  M   D V +  ++  +A+ G GE    +F ++  SGL PD  +V  +
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251

Query: 267 LGVISDLGKRHE-EQVQAYAIK-------------LLLY---------------NNNSNV 297
           L   + +G   + +Q+ +Y +K             L LY                + +NV
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNV 311

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           VLWN  L  Y Q+ D   + E F  M  + +  +  T+   L     T  + LG+QIH  
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSL 371

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
           ++K+GF S + V   LI+MYSK GC+                                  
Sbjct: 372 SIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEA 431

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                    CG+  D   LAS   A + + + +    QIH     +   AD  +   L++
Sbjct: 432 LATFKEMQDCGVWPDNIGLASAASACAGI-KAMRQGLQIHARVYVSGYAADISIWNTLVN 490

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y R G   EA  LF   +  D  TWN +I G+  S    +AL +F  M  +G + +  T
Sbjct: 491 LYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFT 550

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
             +A+ A   L  +KQGKQ+H  A+K+G   +  V++ ++ +Y KCG++ DA+ IF+++ 
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR- 613
             ++V+W T+I+ C  +G    AL ++ QM+  G+ P++ TF  ++ A S +  +E+G  
Sbjct: 611 LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS 670

Query: 614 --QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLA 670
             +  +N+  L+   D +  +  VD+  + G ++ A     +M +  N ++W  +L    
Sbjct: 671 YFKSMSNVYGLNPIPDHYACV--VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACK 728

Query: 671 QHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
            H N   GE   K   +++ H    DS +++ + +A + TG  +   +   +M+++ GI 
Sbjct: 729 VHKNIEIGELAAKHLLELEPH----DSASYVLLSNAYAVTGKWANRDQVRKMMKDR-GIR 783

Query: 728 PE 729
            E
Sbjct: 784 KE 785



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 251/575 (43%), Gaps = 88/575 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA++   +   + F+ N L+ +Y   GS   A R+F  M   D +++N++++ +A 
Sbjct: 163 GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G G         ++F  ++ S      +T+A LL  C S G +   + +H Y LK G+ 
Sbjct: 223 CGHGEC-----ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS 277

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           +D    G+L+++Y K G I  A  +F+     +VVLW +ML AY +     + F +F  +
Sbjct: 278 FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM 337

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAI------------------------ 286
             +G+ P+  +  C+L   +  G+    EQ+ + +I                        
Sbjct: 338 QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCL 397

Query: 287 ----KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               K+L      +VV W   ++GY+Q      A+  F  M    V  D++    A +A 
Sbjct: 398 DKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC 457

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           AG   +  G QIH     SG+ + + + N+L+N+Y++ G                     
Sbjct: 458 AGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWN 517

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G + + FT  S + A ++L + +   KQ+H  A+K
Sbjct: 518 GLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLAD-IKQGKQVHGRAVK 576

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +++ V+ ALI +Y + GS+ +A+ +F      +  +WN +I          +AL+L
Sbjct: 577 TGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDL 636

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM-HAYAMKSGFELDLCVSSGIL 534
           F  M   G + +++T    + AC  + ++++G    K M + Y +    +   CV    +
Sbjct: 637 FDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV----V 692

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           D+  + G +  A+   +++P   + + W T++S C
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 173/355 (48%), Gaps = 34/355 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S  DL  GK  H+ +L +    D     +L+ +Y +CG +  A  +F+     
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++ WN +L AY     G   ++ + F +F  ++ +    ++ T   +L+ C  +G +  
Sbjct: 310 NVVLWNLMLVAY-----GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIEL 364

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H  ++K G   D +VSG L+++YSK+G + +A+ + + +++RDVV W  M+  Y +
Sbjct: 365 GEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQ 424

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQA------YAIKLLL 290
           + F EE    F ++   G+ PD+  +       + +   R   Q+ A      YA  + +
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484

Query: 291 YNNNSNV----------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +N   N+                      + WN  +SG+ Q      A+  F+ M ++  
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +Y+  TF+ A++A+A   ++  G+Q+HG  +K+G  S   V N+LI++Y K G +
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 96/209 (45%), Gaps = 19/209 (9%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           +  +L+ F++     +  +   + S +    + +D+  GK  H R + +    +  + N 
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+++Y +CGS+  A+ +F +M  R+ +SWN+I+ + +  G G      E   LF  +++ 
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG-----LEALDLFDQMKQE 643

Query: 154 ITFTSRLTLAPLLKLCLSSG-------YVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
               + +T   +L  C   G       Y  +   V+G    +  + D +    +V+I  +
Sbjct: 644 GLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG----LNPIPDHY--ACVVDILGR 697

Query: 207 FGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            G++  A+   D M    + ++W+ +L A
Sbjct: 698 AGQLDRARRFVDEMPITANAMIWRTLLSA 726


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 259/802 (32%), Positives = 407/802 (50%), Gaps = 116/802 (14%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A LLKLC  S     ++ +H   LK     + F+S  L+  Y K G +  A  +FD + +
Sbjct: 9   ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
            ++  W  +L  Y++ G   ++  +F       L P  + V                   
Sbjct: 69  PNLFSWNTILSVYSKLGLLSQMQQIF------NLMPFRDGVS------------------ 104

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAA 341
                            WN  +SGY   G    A+  +  M++ + +  + +TF   L  
Sbjct: 105 -----------------WNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLIL 147

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
            +    ++LG+QI+G  LK GF S V VG+ L++MY+K+G +   +          R   
Sbjct: 148 CSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAK----------RYFD 197

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            +PE             +N  + ++ ++  +     R G + E++ LF      D  +W 
Sbjct: 198 EMPE-------------RNVVMCNTMITGLM-----RCGMIEESQRLFCGLKERDSISWT 239

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
            MI G + +    +AL++F  M  +G  +D+ T  + + ACG LL L +GKQ+HAY +++
Sbjct: 240 IMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT 299

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
             + ++ V S ++DMY KC ++  A+++F  +P  + ++WT M+ G   NG  + A+ I+
Sbjct: 300 DHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIF 359

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
            +M+ +GV PD+FT   ++ + + L +LE+G Q H   +     S   V  +L+ +Y KC
Sbjct: 360 FEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKC 419

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+ E+++ LF +M++R+ V W A+L G AQ G   ET+ LFE M AHG++PD VTFIGVL
Sbjct: 420 GSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVL 479

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS  GLV +  + F  M +++GI P V+H + ++D LGRAGR +EA   I +MP    
Sbjct: 480 SACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPD 539

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
                 LL +CRV GD E GKW A+ L+ALEP + ++YVLLS+++A+  +WD V   R  
Sbjct: 540 VVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRG 599

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           M+ K V+K+P                          I+A++E L  ++ E GYVPD   V
Sbjct: 600 MRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSV 659

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNK 897
           L DVEE EK + L +HSEKLA A+GLI  PP   I                     ++ +
Sbjct: 660 LHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQR 719

Query: 898 EPLY--ANRFHHLRDGMCPCAD 917
           E L   A RFH  +DG C C D
Sbjct: 720 EILVRDAVRFHLFKDGTCSCGD 741



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 150/619 (24%), Positives = 248/619 (40%), Gaps = 152/619 (24%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           SSSS+ + S+L+    + +    K  H  IL + + P+ FL+NNL+T Y + G+L YA  
Sbjct: 2   SSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHH 61

Query: 110 LFDKMPDRDLISWNSILAAY--------------------------AHSGEGNAENVTEG 143
           +FD +P  +L SWN+IL+ Y                          A SG  N  + ++ 
Sbjct: 62  VFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDA 121

Query: 144 FRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
            R+++  L+++    +R+T + +L LC     V     ++G  LK G   D FV   LV+
Sbjct: 122 VRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVD 181

Query: 203 IYSKFGKIREAKFLFDGMQERDVVL-------------------------------WKVM 231
           +Y+K G I +AK  FD M ER+VV+                               W +M
Sbjct: 182 MYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIM 241

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLL 290
           +    +NG   E   +F ++  +G   D  +   VL     L    E +Q+ AY I+   
Sbjct: 242 ITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH 301

Query: 291 YNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N                              NV+ W   L GY Q G +  A++ F  
Sbjct: 302 KDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFE 361

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M R+ V+ D  T    +++ A   +L  G Q H   L SG  S + V N+LI +Y K   
Sbjct: 362 MQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGK--- 418

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
            CG   +   L + +                         + D    TAL+  Y + G  
Sbjct: 419 -CGSTENSHRLFTEM------------------------NIRDEVSWTALLAGYAQFG-- 451

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
                                         +++ + LF  M   G + D +T    + AC
Sbjct: 452 -----------------------------KANETIGLFERMLAHGLKPDGVTFIGVLSAC 482

Query: 503 GCLLMLKQGKQMHAYAMKS-GFE--LDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDD 558
               ++++G Q     +K  G    +D C    I+D+  + G + +A++  N++P  PD 
Sbjct: 483 SRAGLVEKGLQYFESMIKEHGIMPIVDHCTC--IIDLLGRAGRLEEARNFINNMPCHPDV 540

Query: 559 VAWTTMISGCVDNGEEDLA 577
           V W T++S C  +G+ ++ 
Sbjct: 541 VGWATLLSSCRVHGDMEIG 559


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/685 (34%), Positives = 361/685 (52%), Gaps = 90/685 (13%)

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            MI    +  S  F   L   A   +L  G+++H   LKSG      + N+L++MY+K G
Sbjct: 86  TMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG 145

Query: 382 CV-------------------------------------------CGLRTDQFTLASVLR 398
            +                                            G + D+ T  S+L 
Sbjct: 146 SLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLN 205

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A ++ PE L + +++H+   K     +  V T+L+ +Y + G +++A+ +F+     ++ 
Sbjct: 206 AFTN-PELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVV 264

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           TW  +I GY        ALEL   M  +    ++IT  + ++ C   L L+ GK++H Y 
Sbjct: 265 TWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYI 324

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           ++SG+  ++ V + ++ MY KCG + +A+ +F D+P  D V WT M++G    G  D A+
Sbjct: 325 IQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAI 384

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
            ++ +M+  G+ PD+ TF   + + S    L++G+ IH  L+    S D ++  +LV MY
Sbjct: 385 DLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMY 444

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG+++DA ++F QM  RN V W AM+ G AQHG   E L+ FE MK  G++PD VTF 
Sbjct: 445 AKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFT 504

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VLSAC++ GLV E  ++F  M   YGI+P VEHYS  VD LGRAG  +EA  +IL+MPF
Sbjct: 505 SVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPF 564

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           +   S+  ALL ACR+  D E G+  AE ++ L+P D  AYV LSNI+AAA +++D    
Sbjct: 565 QPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKV 624

Query: 819 RGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDT 855
           R  M++++V K+P                       A  I+A++  L ++IKE GYVPDT
Sbjct: 625 RQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDT 684

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------L 894
            FVL DV+EE+K + L  HSE+LA  YGL+ TPP + I                     +
Sbjct: 685 RFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKV 744

Query: 895 SNKEPLY--ANRFHHLRDGMCPCAD 917
             +E +   A+RFHH  DG+C C D
Sbjct: 745 VGREIIARDAHRFHHFVDGVCSCGD 769



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 251/551 (45%), Gaps = 60/551 (10%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D   +   V+I  K G+++EA  + + M  +   ++  + R   +            ++H
Sbjct: 60  DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119

Query: 253 ----RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
               +SG+ P+      +L + +  G   + +     I+      + N+V W   +  ++
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR------DRNIVSWTAMIEAFV 173

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
               N  A +C+  M  +  + D VTF+  L A    + L +GQ++H    K+G      
Sbjct: 174 AGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPR 233

Query: 369 VGNSLINMYSKMGCVCGLRT---------------------------------------- 388
           VG SL+ MY+K G +   +                                         
Sbjct: 234 VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293

Query: 389 ---DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
              ++ T  S+L+  ++ P  L   K++H + I++    + +V  ALI +YC+ G + EA
Sbjct: 294 VAPNKITYTSILQGCTT-PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEA 352

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             LF +    D+ TW AM+ GY       +A++LF  M   G + D++T  +A+ +C   
Sbjct: 353 RKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSP 412

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L++GK +H   + +G+ LD+ + S ++ MY KCG+M DA+ +FN +   + VAWT MI
Sbjct: 413 AFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMI 472

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +GC  +G    AL  + QM+  G+ PD+ TF  ++ A + +  +E+GR+ H   + LD  
Sbjct: 473 TGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYG 531

Query: 626 SDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLF 682
             P V      VD+  + G++E+A  +   M  +    +W A+L     H + E   +  
Sbjct: 532 IKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAA 591

Query: 683 EDMKAHGVEPD 693
           E++    ++PD
Sbjct: 592 ENVLK--LDPD 600



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 153/684 (22%), Positives = 288/684 (42%), Gaps = 149/684 (21%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+       L  G+  HA IL S   P+R+L N L++MY++CGSL  ARR+FD + DR+
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW +++ A+  +G  N     E ++ + +++ +     ++T   LL    +   +   
Sbjct: 162 IVSWTAMIEAFV-AGNQN----LEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVG 216

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + VH    K GL  +  V  +LV +Y+K G I +A+ +FD + E++VV W +++  YA+ 
Sbjct: 217 QKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQ 276

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIK---------- 287
           G  +    L   + ++ + P+  +   +L G  + L   H ++V  Y I+          
Sbjct: 277 GQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336

Query: 288 ---LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              + +Y                 + +VV W   ++GY Q+G +  AI+ F  M +  ++
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            D +TF  AL + +    L  G+ IH   + +G+   V + ++L++MY+K    CG   D
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAK----CGSMDD 452

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                               ++ +     + + VA     TA+I    ++G   EA   F
Sbjct: 453 --------------------ARLVFNQMSERNVVA----WTAMITGCAQHGRCREALEYF 488

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E                                M   G + D++T  + + AC  + +++
Sbjct: 489 E-------------------------------QMKKQGIKPDKVTFTSVLSACTHVGLVE 517

Query: 510 QGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMIS 566
           +G++ H  +M   + +   V   S  +D+  + G + +A+++   +P  P    W  ++S
Sbjct: 518 EGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
            C  + +                                   +E+G +   N++KLD   
Sbjct: 577 ACRIHSD-----------------------------------VERGERAAENVLKLD-PD 600

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL-----W-------NAMLVGLAQHGN 674
           D    ++L ++YA  G  EDA  + + M+ R+ V      W       +   V    H  
Sbjct: 601 DDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPE 660

Query: 675 GEETL----KLFEDMKAHGVEPDS 694
            +E      KL E +K  G  PD+
Sbjct: 661 AKEIYAELGKLTEQIKEQGYVPDT 684



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 1/283 (0%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL + + M   G R+        ++ C  L  L+QG+++HA  +KSG + +  + + +L
Sbjct: 79  EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            MY KCG++ DA+ +F+ I   + V+WT MI   V   +   A   Y  M+L+G  PD+ 
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  L+ A +    L+ G+++H  + K     +P VG SLV MYAKCG+I  A ++F ++
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             +N V W  ++ G AQ G  +  L+L E M+   V P+ +T+  +L  C+ T L  E  
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT-TPLALEHG 317

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +  H    + G   E+   + L+    + G  KEA +L   +P
Sbjct: 318 KKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLP 360



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 35/315 (11%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           F  L +A +  +LL +G+  H  I  +    +  +  +L+ MY++CG +  A+ +FDK+P
Sbjct: 200 FVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP 259

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++++++W  ++A YA  G+     V     L   ++++    +++T   +L+ C +   +
Sbjct: 260 EKNVVTWTLLIAGYAQQGQ-----VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH Y ++ G   + +V  AL+ +Y K G ++EA+ LF  +  RDVV W  M+  Y
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA-YAIKL 288
           A+ GF +E   LF  + + G+ PD  +    L   S       GK  H++ V A Y++ +
Sbjct: 375 AQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDV 434

Query: 289 --------------------LLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                               L++N  S  NVV W   ++G  Q G    A+E F  M + 
Sbjct: 435 YLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQ 494

Query: 327 NVQYDSVTFLVALAA 341
            ++ D VTF   L+A
Sbjct: 495 GIKPDKVTFTSVLSA 509



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 143/285 (50%), Gaps = 15/285 (5%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L LL  +Q++  + +  +  + SIL+   +   L  GK  H  I+ S    + ++ N L
Sbjct: 282 ALELLEKMQQAEVAPNKIT--YTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNAL 339

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           +TMY +CG L  AR+LF  +P RD+++W +++  YA  G  +     E   LFR +++  
Sbjct: 340 ITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHD-----EAIDLFRRMQQQG 394

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
               ++T    L  C S  ++   +++H   +  G   D ++  ALV++Y+K G + +A+
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR 454

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------G 268
            +F+ M ER+VV W  M+   A++G   E    F  + + G+ PD  +   VL      G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
           ++ +  K        Y IK ++ + +  V L  +  +G+L+  +N
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR--AGHLEEAEN 557



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 2/236 (0%)

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D +A +  +S     G    AL I + M L G       F  L++  + L +LEQGR++H
Sbjct: 60  DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A ++K     + ++  +L+ MYAKCG++ DA  +F  +  RN V W AM+          
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E  K +E MK  G +PD VTF+ +L+A +   L+ +  +  H+   K G+E E    + L
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELL-QVGQKVHMEIAKAGLELEPRVGTSL 238

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           V    + G   +A  +   +P E +      L+     QG  +    + EK+   E
Sbjct: 239 VGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 284/882 (32%), Positives = 431/882 (48%), Gaps = 132/882 (14%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+   L    +S  ++A   +H + LK GL+     S  L+ +YS+      A+ +FD +
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            +   V W  ++ AY+ NG   +    F  +   G+  ++ ++  VL    D+  R   Q
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDV--RFGAQ 121

Query: 281 VQAYAIKLLLYNN--------------------------------NSNVVLWNKKLSGYL 308
           V A A+   L ++                                  N V WN  +S Y+
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           +   +  AI  F  M+ S  + +   F   + A  G+ +L  G+Q+HG  +++G+   V 
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVF 241

Query: 369 VGNSLINMYSKMG--------------------------CVC-----------------G 385
             N+L++MYSK+G                          CV                  G
Sbjct: 242 TANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSG 301

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L  + FTL+SVL+A +      +L +QIH   +K     D FV+  L+D+Y ++G + +A
Sbjct: 302 LVPNVFTLSSVLKACAG-AGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA 360

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD--EITIATAVKACG 503
             +F+     DL  WNA+I G        + L LF  M   G  LD    T+A+ +K+  
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA 420

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
               +   +Q+HA A K G   D  V +G++D Y KCG +  A  +F +  + D ++ TT
Sbjct: 421 SSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT 480

Query: 564 MISGC--VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           M++     D+GE+  A+ ++ QM   G+ PD F  + L+ A + L+A EQG+Q+HA+LIK
Sbjct: 481 MMTALSQCDHGED--AIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK 538

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
              +SD F G +LV  YAKCG+IEDA + F  +  R  V W+AM+ GLAQHG+G+  L L
Sbjct: 539 RQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDL 598

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M   GV P+ +T   VLSAC++ GLV +A + F  M+E +GI+   EHY+ ++D LG
Sbjct: 599 FHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILG 658

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG+ ++A EL+ +MPF+A+A++  ALLGA RV  D E G+  AEKL  LEP  S  +VL
Sbjct: 659 RAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVL 718

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           L+N +A+A  WD++   R  MK  NVKK+PA                         I+ K
Sbjct: 719 LANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGK 778

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           +  L   + + GYVP+ +  L DV+  EKE  L +HSE+LA A+ LISTP  + I   K 
Sbjct: 779 LAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKN 838

Query: 899 PLYA-----------------------NRFHHLRDGMCPCAD 917
                                      NRFHH  +G C C D
Sbjct: 839 LRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGD 880



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 195/745 (26%), Positives = 335/745 (44%), Gaps = 106/745 (14%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           ++  L  G   H+ +L S  +     +N+L+T+YSRC     AR +FD++PD   +SW+S
Sbjct: 16  TSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSS 73

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ AY+++G        +    FR++R      +   L  +LK C     V     VH  
Sbjct: 74  LVTAYSNNGMPR-----DALLAFRAMRGRGVPCNEFALPVVLK-CAPD--VRFGAQVHAL 125

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM----QERDVVLWKVMLRAYAENGF 240
           A+   LV D FV+ ALV +Y  FG + EA+ +FD       ER+ V W  M+ AY +N  
Sbjct: 126 AVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQ 185

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE---QVQAYAIK---------- 287
             +   +F ++  SG  P++    CV+   +  G R  E   QV    ++          
Sbjct: 186 SGDAIGVFREMVWSGERPNEFGFSCVVNACT--GSRDLEAGRQVHGAVVRTGYEKDVFTA 243

Query: 288 ---LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              + +Y+                 ++VV WN  +SG +  G +H A+E  + M  S + 
Sbjct: 244 NALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLV 303

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLK--SGFYSAVIVGNSLINMYSKMGCV---- 383
            +  T    L A AG    NLG+QIHG  +K  + F   V VG  L++MY+K G +    
Sbjct: 304 PNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG--LVDMYAKHGFLDDAR 361

Query: 384 --------------------CG---------------------LRTDQFTLASVLRASSS 402
                               C                      L  ++ TLASVL++++S
Sbjct: 362 KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTAS 421

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
             E +  ++Q+H  A K   ++DS V   LID Y + G +  A  +F+     D+ +   
Sbjct: 422 -SEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT 480

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           M+      ++   A++LF  M   G   D   +++ + AC  L   +QGKQ+HA+ +K  
Sbjct: 481 MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ 540

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  D+   + ++  Y KCG++ DA   F+ +P    V+W+ MI G   +G    AL ++H
Sbjct: 541 FTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFH 600

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYA 639
           +M   GV P+  T   ++ A +    ++  ++   ++     +D + + +    ++D+  
Sbjct: 601 RMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYA--CMIDILG 658

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTF 697
           + G +EDA  L   M  + N  +W A+L     H + E  L      K   +EP+ S T 
Sbjct: 659 RAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPE--LGRMAAEKLFTLEPEKSGTH 716

Query: 698 IGVLSACSYTGLVSEAYENFHLMRE 722
           + + +  +  G+  E  +   LM++
Sbjct: 717 VLLANTYASAGMWDEMAKVRKLMKD 741



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 187/384 (48%), Gaps = 28/384 (7%)

Query: 386 LRTDQFTLASVLR--ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           +RT +   +++ R   S SL  G HL    H H +K+  +A    S  L+ +Y R    +
Sbjct: 1   MRTPETIGSALARFGTSRSLFAGAHL----HSHLLKSGLLAG--FSNHLLTLYSRCRLPS 54

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A  +F+        +W++++  Y  +     AL  F  M   G   +E  +   +K   
Sbjct: 55  AARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK--- 111

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA----PDDV 559
           C   ++ G Q+HA A+ +    D+ V++ ++ +Y   G + +A+ +F++        + V
Sbjct: 112 CAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAV 171

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +W TMIS  V N +   A+ ++ +M  SG  P+EF F+ +V A +    LE GRQ+H  +
Sbjct: 172 SWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAV 231

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           ++     D F   +LVDMY+K G+IE A  +F++M   + V WNA + G   HG+    L
Sbjct: 232 VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRAL 291

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG--IEPEVEHYSF-- 735
           +L   MK+ G+ P+  T   VL AC+  G        F+L R+ +G  ++   +   F  
Sbjct: 292 ELLLQMKSSGLVPNVFTLSSVLKACAGAGA-------FNLGRQIHGFMVKAVADFDEFVA 344

Query: 736 --LVDALGRAGRTKEAGELILSMP 757
             LVD   + G   +A ++   MP
Sbjct: 345 VGLVDMYAKHGFLDDARKVFDFMP 368



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 162/359 (45%), Gaps = 37/359 (10%)

Query: 57  FSILRHAISTS-DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FS + +A + S DL  G+  H  ++ +    D F  N L+ MYS+ G +  A  +F+KMP
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP 267

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
             D++SWN+ ++     G  +         L   ++ S    +  TL+ +LK C  +G  
Sbjct: 268 AADVVSWNAFISGCVTHGHDH-----RALELLLQMKSSGLVPNVFTLSSVLKACAGAGAF 322

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +HG+ +K    +DEFV+  LV++Y+K G + +A+ +FD M  RD++LW  ++   
Sbjct: 323 NLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGC 382

Query: 236 AENGFGEEVFHLFVDLHRSGLCPD--DESVQCVL-GVISDLGKRHEEQVQA--------- 283
           + +G   EV  LF  + + GL  D    ++  VL    S     H  QV A         
Sbjct: 383 SHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLS 442

Query: 284 -------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                              YAIK+   + + +++     ++   Q      AI+ FV M+
Sbjct: 443 DSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQML 502

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           R  ++ DS      L A         G+Q+H   +K  F S V  GN+L+  Y+K G +
Sbjct: 503 RKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSI 561



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 13/258 (5%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           LSL   ++K       + +   S+L+   S+  +   +  HA       + D  + N L+
Sbjct: 392 LSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLI 451

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESI 154
             Y +CG L YA ++F +    D+IS  +++ A +    G      +  +LF + LR+ +
Sbjct: 452 DSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGE-----DAIKLFVQMLRKGL 506

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              S   L+ LL  C S       + VH + +K     D F   ALV  Y+K G I +A 
Sbjct: 507 EPDS-FVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------G 268
             F G+ ER +V W  M+   A++G G+    LF  +   G+ P+  ++  VL      G
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625

Query: 269 VISDLGKRHEEQVQAYAI 286
           ++ D  K  E   + + I
Sbjct: 626 LVDDAKKYFESMKETFGI 643


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 270/877 (30%), Positives = 418/877 (47%), Gaps = 127/877 (14%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           + +L+ C S   +  ++ +HG  +K  +  D  +  +LVN+Y+K      A+ +   M +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVISDLGKRH 277
           RDVV W  +++     GF  +  +LF ++   G+ P++ ++      C L +  DLGK+ 
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 278 EEQ----------------VQAYAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDN 313
             Q                V  YA         K+ +     N V WN  L+GY Q GD 
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            G ++ F +M+  +V+ +  T    L   A + NL  GQ IH   +K G+     +G  L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 374 INMYSKMGCVCGLRTD-------------------------------------------- 389
           ++MYSK    CGL  D                                            
Sbjct: 356 VDMYSK----CGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411

Query: 390 ---QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
              Q+T+ S+L A+++    L   + IH    K     D  VS AL+ +Y +NG + +  
Sbjct: 412 LPNQYTICSLLSAATN-TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            L+E+    DL +WNA + G        + L +F HM   G   +  T  + + +C CL 
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            +  G+Q+HA+ +K+  + +  V + ++DMY KC  + DA   FN +   D   WT +I+
Sbjct: 531 DVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIIT 590

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
                 + + AL+ + QM+  GV P+EFT A  +   S L +LE G+Q+H+ + K    S
Sbjct: 591 NYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS 650

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D FVG +LVDMYAKCG +E+A  LF+ +  R+T+ WN ++ G AQ+G G + L  F  M 
Sbjct: 651 DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+ PD VTF G+LSACS+ GLV E  E+F+ M   +GI P V+H + +VD LGR G+ 
Sbjct: 711 DEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKF 770

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            E  + I  M    +A +   +LGA ++  +   G+  A KL  L+P + S+Y+LLSNIF
Sbjct: 771 DELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIF 830

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLI 843
           A   +WDDV   R  M  K VKK+P                          I  K++ L 
Sbjct: 831 ATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELD 890

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------- 893
           + +    YVP T++VL +V E EK+  L +HSE+LA  + LIST     I          
Sbjct: 891 RELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICR 950

Query: 894 -----------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                      ++N+E +  +  RFHH ++G C C D
Sbjct: 951 DCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCND 987



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 205/716 (28%), Positives = 326/716 (45%), Gaps = 86/716 (12%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           +SS      + S+LR   S   L + K+ H  I+     PD  L  +L+ +Y++C    Y
Sbjct: 106 WSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAY 165

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           AR +  KMPDRD++SW +++      G  N     +   LF+ ++      +  TLA  L
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFAN-----DSIYLFQEMQNEGIMPNEFTLATGL 220

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           K C     +   + +H  A K+GL+ D FV  ALV++Y+K G+I  A  +F GM E++ V
Sbjct: 221 KACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV 280

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI 286
            W V+L  YA+ G    V  LF  +    +  ++ ++  VL   ++     + QV    I
Sbjct: 281 TWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLI 340

Query: 287 KLLLYNNNS-----------------------------NVVLWNKKLSGYLQVGDNHGAI 317
               Y  N                              ++V+W+  ++   Q G +  +I
Sbjct: 341 IKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESI 400

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           + F  M   +   +  T    L+A   T NL  GQ IH    K GF + V V N+L+ MY
Sbjct: 401 KLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460

Query: 378 SKMGCV---------------------------CGLR----------------TDQFTLA 394
            K GCV                           CG+                  + +T  
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S+L + S L + +H  +Q+H H IKN    ++FV TALID+Y +   + +A+  F     
Sbjct: 521 SILGSCSCLFD-VHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            DL TW  +I  Y  +N   KAL  F  M   G + +E T+A  +  C  L  L+ G+Q+
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           H+   KSG   D+ V S ++DMY KCG M +A+++F  +   D +AW T+I G   NG+ 
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--I 632
           + AL+ +  M   G+ PD  TF  ++ A S    +E+G++ H N +  D    P V    
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE-HFNSMYRDFGISPTVDHCA 758

Query: 633 SLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN---GEETL-KLFE 683
            +VD+  + G  ++     ++M + +N ++W  +L     H N   GE+   KLFE
Sbjct: 759 CMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFE 814



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 2/183 (1%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           ++ +++  +   +L   + IH  ++K   + D  + +SLV++YAKC     A ++  +M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            R+ V W A++ GL   G   +++ LF++M+  G+ P+  T    L ACS   +  +  +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLC-MALDLGK 233

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
             H    K G+  ++   S LVD   + G  + A ++ + MP E +      LL     +
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNGYAQR 292

Query: 776 GDT 778
           GD 
Sbjct: 293 GDV 295


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 269/875 (30%), Positives = 417/875 (47%), Gaps = 127/875 (14%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           + +L+ C S   +  ++ +HG  +K  +  D  +  +LVN+Y+K      A+ +   M +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVISDLGKRH 277
           RDVV W  +++     GF  +  +LF ++   G+ P++ ++      C L +  DLGK+ 
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 278 EEQ----------------VQAYAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDN 313
             Q                V  YA         K+ +     N V WN  L+GY Q GD 
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            G ++ F +M+  +V+ +  T    L   A + NL  GQ IH   +K G+     +G  L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 374 INMYSKMGCVCGLRTD-------------------------------------------- 389
           ++MYSK    CGL  D                                            
Sbjct: 356 VDMYSK----CGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411

Query: 390 ---QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
              Q+T+ S+L A+++    L   + IH    K     D  VS AL+ +Y +NG + +  
Sbjct: 412 LPNQYTICSLLSAATN-TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            L+E+    DL +WNA + G        + L +F HM   G   +  T  + + +C CL 
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            +  G+Q+HA+ +K+  + +  V + ++DMY KC  + DA   FN +   D   WT +I+
Sbjct: 531 DVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIIT 590

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
                 + + AL+ + QM+  GV P+EFT A  +   S L +LE G+Q+H+ + K    S
Sbjct: 591 NYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS 650

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D FVG +LVDMYAKCG +E+A  LF+ +  R+T+ WN ++ G AQ+G G + L  F  M 
Sbjct: 651 DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+ PD VTF G+LSACS+ GLV E  E+F+ M   +GI P V+H + +VD LGR G+ 
Sbjct: 711 DEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKF 770

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            E  + I  M    +A +   +LGA ++  +   G+  A KL  L+P + S+Y+LLSNIF
Sbjct: 771 DELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIF 830

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLI 843
           A   +WDDV   R  M  K VKK+P                          I  K++ L 
Sbjct: 831 ATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELD 890

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------- 893
           + +    YVP T++VL +V E EK+  L +HSE+LA  + LIST     I          
Sbjct: 891 RELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICR 950

Query: 894 -----------LSNKEPLYAN--RFHHLRDGMCPC 915
                      ++N+E +  +  RFHH ++G C C
Sbjct: 951 DCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 205/716 (28%), Positives = 326/716 (45%), Gaps = 86/716 (12%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           +SS      + S+LR   S   L + K+ H  I+     PD  L  +L+ +Y++C    Y
Sbjct: 106 WSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAY 165

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           AR +  KMPDRD++SW +++      G  N     +   LF+ ++      +  TLA  L
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFAN-----DSIYLFQEMQNEGIMPNEFTLATGL 220

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           K C     +   + +H  A K+GL+ D FV  ALV++Y+K G+I  A  +F GM E++ V
Sbjct: 221 KACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV 280

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI 286
            W V+L  YA+ G    V  LF  +    +  ++ ++  VL   ++     + QV    I
Sbjct: 281 TWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLI 340

Query: 287 KLLLYNNNS-----------------------------NVVLWNKKLSGYLQVGDNHGAI 317
               Y  N                              ++V+W+  ++   Q G +  +I
Sbjct: 341 IKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESI 400

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           + F  M   +   +  T    L+A   T NL  GQ IH    K GF + V V N+L+ MY
Sbjct: 401 KLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460

Query: 378 SKMGCV---------------------------CGLR----------------TDQFTLA 394
            K GCV                           CG+                  + +T  
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S+L + S L + +H  +Q+H H IKN    ++FV TALID+Y +   + +A+  F     
Sbjct: 521 SILGSCSCLFD-VHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            DL TW  +I  Y  +N   KAL  F  M   G + +E T+A  +  C  L  L+ G+Q+
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           H+   KSG   D+ V S ++DMY KCG M +A+++F  +   D +AW T+I G   NG+ 
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--I 632
           + AL+ +  M   G+ PD  TF  ++ A S    +E+G++ H N +  D    P V    
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE-HFNSMYRDFGISPTVDHCA 758

Query: 633 SLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN---GEETL-KLFE 683
            +VD+  + G  ++     ++M + +N ++W  +L     H N   GE+   KLFE
Sbjct: 759 CMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFE 814



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 2/183 (1%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           ++ +++  +   +L   + IH  ++K   + D  + +SLV++YAKC     A ++  +M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            R+ V W A++ GL   G   +++ LF++M+  G+ P+  T    L ACS   +  +  +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLC-MALDLGK 233

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
             H    K G+  ++   S LVD   + G  + A ++ + MP E +      LL     +
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNGYAQR 292

Query: 776 GDT 778
           GD 
Sbjct: 293 GDV 295


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 259/875 (29%), Positives = 420/875 (48%), Gaps = 120/875 (13%)

Query: 162 LAPLLKLCLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           L   L+ C   G  W     +H  ++  GL  D  +   L+++Y+K G + +A+ +F  +
Sbjct: 45  LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVISDLGK 275
             RD V W  ML  YA+ G G+E F L+  +H + + P    +      C  G +   G+
Sbjct: 105 SSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGR 164

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLW------------------------NKKLSGYLQVG 311
               QV   A     +  N+ + L+                        N  +SG+ Q G
Sbjct: 165 MIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCG 224

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A++ F  M  S ++ D VT    LAA A   +L  G+Q+H   LK+G     I   
Sbjct: 225 HGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEG 284

Query: 372 SLINMYSKMGCV-------------------------------------------CGLRT 388
           SL+++Y K G +                                            G+  
Sbjct: 285 SLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHP 344

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           ++FT   +LR  +   + + L +QIH  +IKN   +D +VS  LID+Y +   + +A  +
Sbjct: 345 NKFTYPCILRTCTCTGQ-IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKI 403

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            E  +  D+ +W +MI GY+  +   +AL  F  M   G   D I +A+A  AC  +  +
Sbjct: 404 LEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAM 463

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +QG Q+HA    SG+  D+ + + ++++Y +CG   +A S+F +I   D++ W  +ISG 
Sbjct: 464 RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGF 523

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +   + AL ++ +M  +G   + FTF   + A + L  ++QG+Q+H   +K   +S+ 
Sbjct: 524 GQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSET 583

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L+ +Y KCG+IEDA ++F +M +RN V WN ++   +QHG G E L LF+ MK  
Sbjct: 584 EVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQE 643

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G++P+ VTFIGVL+ACS+ GLV E    F  M   YG+ P  +HY+ +VD LGRAG+   
Sbjct: 644 GLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDR 703

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A   +  MP  A+A + R LL AC+V  + E G+  A+ L+ LEP DS++YVLLSN +A 
Sbjct: 704 ARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAV 763

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
             +W +    R  MK + ++K+P                       +D I+  +  L  R
Sbjct: 764 TGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDR 823

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------ 893
           + + GY  +   +  + E+E+K+   + HSEKLA A+GL++ PP   +            
Sbjct: 824 LSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDC 883

Query: 894 ---------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                    ++ +E +  +  RFHH   G C C D
Sbjct: 884 HSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGD 918



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 190/722 (26%), Positives = 332/722 (45%), Gaps = 92/722 (12%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           DR + N L+ +Y++ G +  AR++F ++  RD +SW ++L+ YA  G G      E FRL
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGK-----EAFRL 131

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +  +  +    +   L+ +L  C           +H    K     + FV  AL+ +Y  
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           FG  + A+ +F  M   D V +  ++  +A+ G GE    +F ++  SGL PD  +V  +
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251

Query: 267 LGVISDLGKRHE-EQVQAYAIK-------------LLLY---------------NNNSNV 297
           L   + +G   + +Q+ +Y +K             L LY                + +NV
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNV 311

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           VLWN  L  Y Q+ D   + E F  M  + +  +  T+   L     T  + LG+QIH  
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSL 371

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
           ++K+GF S + V   LI+MYSK  C+                                  
Sbjct: 372 SIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEA 431

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                    CG+  D   LAS   A + + + +    QIH     +   AD  +   L++
Sbjct: 432 LATFKEMQDCGVWPDNIGLASAASACAGI-KAMRQGLQIHARVYVSGYAADISIWNTLVN 490

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y R G   EA  LF   D  D  TWN +I G+  S    +AL +F  M  +G + +  T
Sbjct: 491 LYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFT 550

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
             +A+ A   L  +KQGKQ+H  A+K+G   +  V++ ++ +Y KCG++ DA+ IF+++ 
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR- 613
             ++V+W T+I+ C  +G    AL ++ QM+  G+ P++ TF  ++ A S +  +E+G  
Sbjct: 611 LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS 670

Query: 614 --QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLA 670
             +  +N+  L+   D +  +  VD+  + G ++ A     +M +  N ++W  +L    
Sbjct: 671 YFKSMSNVYGLNPIPDHYACV--VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACK 728

Query: 671 QHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
            H N   GE   K   +++ H    DS +++ + +A + TG  +   +   +M+++ GI 
Sbjct: 729 VHKNIEIGELAAKHLLELEPH----DSASYVLLSNAYAVTGKWANRDQVRKMMKDR-GIR 783

Query: 728 PE 729
            E
Sbjct: 784 KE 785



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 251/575 (43%), Gaps = 88/575 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA++   +   + F+ N L+ +Y   GS   A R+F  M   D +++N++++ +A 
Sbjct: 163 GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G G         ++F  ++ S      +T+A LL  C S G +   + +H Y LK G+ 
Sbjct: 223 CGHGEC-----ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS 277

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           +D    G+L+++Y K G I  A  +F+     +VVLW +ML AY +     + F +F  +
Sbjct: 278 FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM 337

Query: 252 HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAI------------------------ 286
             +G+ P+  +  C+L   +  G+    EQ+ + +I                        
Sbjct: 338 QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCL 397

Query: 287 ----KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               K+L      +VV W   ++GY+Q      A+  F  M    V  D++    A +A 
Sbjct: 398 DKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC 457

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           AG   +  G QIH     SG+ + + + N+L+N+Y++ G                     
Sbjct: 458 AGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWN 517

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G + + FT  S + A ++L + +   KQ+H  A+K
Sbjct: 518 GLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLAD-IKQGKQVHGRAVK 576

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +++ V+ ALI +Y + GS+ +A+ +F      +  +WN +I          +AL+L
Sbjct: 577 TGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDL 636

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM-HAYAMKSGFELDLCVSSGIL 534
           F  M   G + +++T    + AC  + ++++G    K M + Y +    +   CV    +
Sbjct: 637 FDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV----V 692

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           D+  + G +  A+   +++P   + + W T++S C
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 172/355 (48%), Gaps = 34/355 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S  DL  GK  H+ +L +    D     +L+ +Y +CG +  A  +F+     
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++ WN +L AY     G   ++ + F +F  ++ +    ++ T   +L+ C  +G +  
Sbjct: 310 NVVLWNLMLVAY-----GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIEL 364

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H  ++K G   D +VSG L+++YSK+  + +A+ + + +++RDVV W  M+  Y +
Sbjct: 365 GEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQ 424

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQA------YAIKLLL 290
           + F EE    F ++   G+ PD+  +       + +   R   Q+ A      YA  + +
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484

Query: 291 YNNNSNV----------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +N   N+                      + WN  +SG+ Q      A+  F+ M ++  
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA 544

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +Y+  TF+ A++A+A   ++  G+Q+HG  +K+G  S   V N+LI++Y K G +
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 97/209 (46%), Gaps = 19/209 (9%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           +  +L+ F++ S   +  +   + S +    + +D+  GK  H R + +    +  + N 
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+++Y +CGS+  A+ +F +M  R+ +SWN+I+ + +  G G      E   LF  +++ 
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG-----LEALDLFDQMKQE 643

Query: 154 ITFTSRLTLAPLLKLCLSSG-------YVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
               + +T   +L  C   G       Y  +   V+G    +  + D +    +V+I  +
Sbjct: 644 GLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG----LNPIPDHY--ACVVDILGR 697

Query: 207 FGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            G++  A+   D M    + ++W+ +L A
Sbjct: 698 AGQLDRARRFVDEMPITANAMIWRTLLSA 726


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 290/977 (29%), Positives = 468/977 (47%), Gaps = 142/977 (14%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H+R+  +    D +L NNL+  Y   G  V AR++FD+MP R+ +SW  I++ Y+ +GE 
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA--SETVHGYALKIGLVWD 193
                 E     R + +   F+++     +L+ C   G V       +HG   K+    D
Sbjct: 84  K-----EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138

Query: 194 EFVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             VS  L+++Y K  G +  A   F  ++ ++ V W  ++  Y++ G     F +F  + 
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198

Query: 253 RSGLCPDD---------------------ESVQCVL---GVISDL-------GKRHEEQV 281
             G  P +                     E + C +   G+++DL           +   
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
            +YA K+       N V  N  + G ++      A + F++M  S +     ++++ L++
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSS 317

Query: 342 -----VAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLR------TD 389
                +A    L  G+++HG  + +G    ++ +GN L+NMY+K G +   R      TD
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377

Query: 390 Q-------------------------------------FTLASVLRASSSLPEGLHLSKQ 412
           +                                     FTL S L + +SL     L +Q
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA-KLGQQ 436

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH  ++K     +  VS AL+ +Y   G + E   +F +    D  +WN++I     S  
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496

Query: 473 S-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           S  +A+  F +   +G++L+ IT ++ + A   L   + GKQ+H  A+K+    +    +
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN 556

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            ++  Y KCG M   + IF+ +    D+V W +MISG + N     AL +   M  +G  
Sbjct: 557 ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQR 616

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D F +A ++ A + +  LE+G ++HA  ++    SD  VG +LVDMY+KCG ++ A   
Sbjct: 617 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F  M +RN+  WN+M+ G A+HG GEE LKLFE MK  G   PD VTF+GVLSACS+ GL
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           + E +++F  M + YG+ P +EH+S + D LGRAG   +  + I  MP + +  + R +L
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796

Query: 770 GA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           GA CR  G   E GK  AE L  LEP ++  YVLL N++AA  +W+D+  AR +MK  +V
Sbjct: 797 GACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADV 856

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK+                        AD+I+ K++ L +++++ GYVP T F L D+E+
Sbjct: 857 KKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQ 916

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----------------------- 901
           E KE  L YHSEKLA A+ L +   S++ +   + L                        
Sbjct: 917 ENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILR 976

Query: 902 -ANRFHHLRDGMCPCAD 917
            +NRFHH +DG C C+D
Sbjct: 977 DSNRFHHFQDGACSCSD 993



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 176/714 (24%), Positives = 297/714 (41%), Gaps = 89/714 (12%)

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G+  A+   H    K  L  D ++   L+N Y + G    A+ +FD M  R+ V W  ++
Sbjct: 15  GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV---ISDLGKRHEEQVQ------A 283
             Y+ NG  +E      D+ + G+  +  +   VL     I  +G     Q+       +
Sbjct: 75  SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134

Query: 284 YAIKLLLYN-----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECF 320
           YA+  ++ N                          N V WN  +S Y Q GD   A   F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194

Query: 321 VNMIRSNVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            +M     +    TF  LV  A      ++ L +QI  T  KSG  + + VG+ L++ ++
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254

Query: 379 KMGCVCGLRT----------------------------------DQFTLASVLRAS---- 400
           K G +   R                                   D  ++  V   S    
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314

Query: 401 -SSLPE-------GLHLSKQIHVHAIKNDTVADSFV--STALIDVYCRNGSMAEAEYLFE 450
            SS PE       GL   +++H H I    V D  V     L+++Y + GS+A+A  +F 
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLV-DFMVGIGNGLVNMYAKCGSIADARRVFY 373

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D  +WN+MI G   +    +A+E +  M          T+ +++ +C  L   K 
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+Q+H  ++K G +L++ VS+ ++ +Y + G + + + IF+ +P  D V+W ++I G + 
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALA 492

Query: 571 NGEEDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             E  L  A+  +   + +G   +  TF+ ++ A S L+  E G+QIH   +K + + + 
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
               +L+  Y KCG ++    +F +M + R+ V WN+M+ G   +    + L L   M  
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G   DS  +  VLSA +    +    E  H    +  +E +V   S LVD   + GR  
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLD 671

Query: 748 EAGELILSMPFEASASMHRALLGACR-VQGDTETGKWVAEKLMALEPFDSSAYV 800
            A     +MP   S S +  + G  R  QG+     +   KL    P D   +V
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFV 725



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 247/592 (41%), Gaps = 96/592 (16%)

Query: 63  AISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           +++  D+ L +     I  S  + D F+ + L++ +++ GSL YAR++F++M  R+ ++ 
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277

Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESI-----TFTSRLTLAPLLKLCLSSGYVWA 177
           N ++        G      E  +LF  +   I     ++   L+  P   L    G    
Sbjct: 278 NGLMVGLVRQKWGE-----EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332

Query: 178 SETVHGYALKIGLVWDEFVSG---ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            E VHG+ +  GLV  +F+ G    LVN+Y+K G I +A+ +F  M ++D V W  M+  
Sbjct: 333 RE-VHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN 293
             +NG   E    +  + R  + P   ++   L   + L   +  +Q+   ++KL +  N
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449

Query: 294 --NSNVVLWNKKLSGYL--------------QVGDNH-------------GAIECFVNMI 324
              SN ++     +GYL              QV  N               A+ CF+N  
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           R+  + + +TF   L+AV+      LG+QIHG  LK+         N+LI  Y K G + 
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569

Query: 384 -------------------------------------------CGLRTDQFTLASVLRAS 400
                                                       G R D F  A+VL A 
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           +S+   L    ++H  +++    +D  V +AL+D+Y + G +  A   F      +  +W
Sbjct: 630 ASVAT-LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           N+MI GY       +AL+LF  M   G+   D +T    + AC    +L++G + H  +M
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESM 747

Query: 520 KSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              + L   +   S + D+  + G +   +     +P  P+ + W T++  C
Sbjct: 748 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 26/238 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  G   HA  + +    D  + + L+ MYS+CG L YA R F+ MP R
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC-----LS 171
           +  SWNS+++ YA  G+G      E  +LF +++ +  T    +T   +L  C     L 
Sbjct: 684 NSYSWNSMISGYARHGQGE-----EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKV 230
            G+         Y L   +  + F    + ++  + G++ + +   + M  + +V++W+ 
Sbjct: 739 EGFKHFESMSDSYGLAPRI--EHF--SCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794

Query: 231 MLRAYAE-NG----FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           +L A    NG     G++   +   L      P++     +LG +   G R E+ V+A
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLE-----PENAVNYVLLGNMYAAGGRWEDLVKA 847



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%)

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           SC+      R  H+ L K     D ++  +L++ Y + G+   A  +F +M +RN V W 
Sbjct: 12  SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
            ++ G +++G  +E L    DM   G+  +   F+ VL AC   G V
Sbjct: 72  CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 271/827 (32%), Positives = 415/827 (50%), Gaps = 125/827 (15%)

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           R A+ LFD    RD+     +L  Y+     +E  HLFV L+RSGL PD  ++ CVL V 
Sbjct: 53  RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC 112

Query: 271 S-DLGKRHEEQVQAYAIKLLLYNN----------------------------NSNVVLWN 301
           +        EQV    +K  L ++                            + +VV WN
Sbjct: 113 AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWN 172

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             L+GY     N    E F  M     + D  T    +AA+A    + +G QIH   +K 
Sbjct: 173 SLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKL 232

Query: 362 GFYSAVIVGNSLINMYSKMGCV-------------------------------------- 383
           GF +  +V NSLI+M SK G +                                      
Sbjct: 233 GFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETF 292

Query: 384 -----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                 G +    T ASV+++ +SL E L L + +H   +K+    +  V TAL+    +
Sbjct: 293 NNMQLAGAKPTHATFASVIKSCASLKE-LGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351

Query: 439 NGSMAEAEYLFENKDGFD-LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
              + +A  LF    G   + +W AMI GY+ + ++ +A+ LFS M   G + +  T +T
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +     + +     ++HA  +K+ +E    V + +LD +VK G + DA  +F  I   D
Sbjct: 412 ILTVQHAVFI----SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKD 467

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIH 616
            +AW+ M++G    GE + A  I+HQ+   G+ P+EFTF  ++ A +  TA +EQG+Q H
Sbjct: 468 VIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFH 527

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  IKL  ++   V  SLV +YAK GNIE A+ +FK+   R+ V WN+M+ G AQHG  +
Sbjct: 528 AYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAK 587

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + L++FE+M+   +E D++TFIGV+SAC++ GLV +    F++M   + I P +EHYS +
Sbjct: 588 KALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCM 647

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D   RAG   +A ++I  MPF  +A++ R +L A RV  + E GK  AEK+++LEP  S
Sbjct: 648 IDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHS 707

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
           +AYVLLSNI+AAA  W +  + R  M ++ VKK+P                       +D
Sbjct: 708 AAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSD 767

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV- 892
            I++K+  L  R+++ GY PDT++V  D+E+E+KE  L +HSE+LA A+GLI+T P    
Sbjct: 768 HIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPL 827

Query: 893 -----------------ILSNKEPLY-----ANRFHHLRDGMCPCAD 917
                            ++S  E  Y     +NRFHH + G+C C D
Sbjct: 828 QIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGD 874



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 149/664 (22%), Positives = 280/664 (42%), Gaps = 124/664 (18%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +G+  H + +    +    + N+L+ MY++ G++   RR+FD+M DRD++SWNS+L  Y+
Sbjct: 120 VGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYS 179

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +   +     + + LF  ++         T++ ++    + G V     +H   +K+G 
Sbjct: 180 WNRFND-----QVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +  V  +L+++ SK G +R+A+ +FD M+ +D V W  M+  +  NG   E F  F +
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294

Query: 251 LHRSGLCPDDESVQCVL---GVISDLG----------------------------KRHEE 279
           +  +G  P   +   V+     + +LG                             + +E
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
              A+++  L++   S VV W   +SGYLQ GD   A+  F  M R  V+ +  T+    
Sbjct: 355 IDDAFSLFSLMHGVQS-VVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTY---- 409

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------- 384
           + +    +     +IH   +K+ +  +  VG +L++ + K+G +                
Sbjct: 410 STILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469

Query: 385 ----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                                       G++ ++FT  S++ A ++    +   KQ H +
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAY 529

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           AIK        VS++L+ +Y + G++  A  +F+ +   DL +WN+MI GY     + KA
Sbjct: 530 AIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKA 589

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGIL 534
           LE+F  M      +D IT    + AC    ++ +G Q +   M +   ++  +   S ++
Sbjct: 590 LEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKG-QNYFNIMINDHHINPTMEHYSCMI 648

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           D+Y + G +  A  I N +P P                                  P   
Sbjct: 649 DLYSRAGMLGKAMDIINGMPFP----------------------------------PAAT 674

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCS-SDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            + I++ AS     +E G+     +I L+   S  +V +S  ++YA  GN  +   + K 
Sbjct: 675 VWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLS--NIYAAAGNWHEKVNVRKL 732

Query: 654 MDMR 657
           MD R
Sbjct: 733 MDKR 736



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 123/247 (49%), Gaps = 20/247 (8%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           DT + +  FSL     ++ +HF+ S+        ++HA+  S++      HA ++ ++  
Sbjct: 386 DTDQAVNLFSLMRREGVKPNHFTYST-----ILTVQHAVFISEI------HAEVIKTNYE 434

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
               +   L+  + + G++  A ++F+ +  +D+I+W+++LA YA +GE       E  +
Sbjct: 435 KSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGE-----TEEAAK 489

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLS-SGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           +F  L       +  T   ++  C + +  V   +  H YA+K+ L     VS +LV +Y
Sbjct: 490 IFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLY 549

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G I  A  +F   +ERD+V W  M+  YA++G  ++   +F ++ +  L  D  +  
Sbjct: 550 AKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAIT-- 607

Query: 265 CVLGVIS 271
             +GVIS
Sbjct: 608 -FIGVIS 613



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 83/173 (47%), Gaps = 11/173 (6%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           T+ +  GK  HA  +         ++++L+T+Y++ G++  A  +F +  +RDL+SWNS+
Sbjct: 517 TASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSM 576

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           ++ YA  G+       +   +F  +++       +T   ++  C  +G V   +      
Sbjct: 577 ISGYAQHGQAK-----KALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIM 631

Query: 186 LK---IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           +    I    + +    ++++YS+ G + +A  + +GM       +W+++L A
Sbjct: 632 INDHHINPTMEHY--SCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA 682


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 268/846 (31%), Positives = 434/846 (51%), Gaps = 56/846 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+      +L LG   HA+++ +      FL + L+ +Y + G +  ARR+FDKM +R
Sbjct: 94  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ SW +I+  Y   G G+ E   E  +LF  +              + K C        
Sbjct: 154 NVFSWTAIMEMYC--GLGDYE---ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + V+ Y L IG   +  V G++++++ K G++  A+  F+ ++ +DV +W +M+  Y  
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 268

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKL-LLYNNNSN 296
            G  ++      D+  SG+ PD  +   ++   +  G+   E+   Y +++  L +   N
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQF--EEASKYFLEMGGLKDFKPN 326

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VV W   ++G  Q G +  A+  F  M+   V+ +S+T   A++A      L  G++IHG
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 386

Query: 357 TTLK-SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             +K     S ++VGNSL++ Y+K                  R+         + KQ   
Sbjct: 387 YCIKVEELDSDLLVGNSLVDYYAK-----------------CRSVEVARRKFGMIKQ--- 426

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENK-DGF--DLATWNAMIFGYILSN 471
                    D     A++  Y   GS  EA E L E K  G   D+ TWN ++ G+    
Sbjct: 427 --------TDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG 478

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           +   ALE F  MH+ G   +  TI+ A+ ACG +  LK GK++H Y +++  EL   V S
Sbjct: 479 DGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS 538

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY  C ++  A S+F+++   D V W ++IS C  +G    AL +  +M LS V  
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  T    + A S L AL QG++IH  +I+    +  F+  SL+DMY +CG+I+ +  +F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             M  R+ V WN M+     HG G + + LF+  +  G++P+ +TF  +LSACS++GL+ 
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIE 718

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E ++ F +M+ +Y ++P VE Y+ +VD L RAG+  E  E I  MPFE +A++  +LLGA
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR+  + +  ++ A  L  LEP  S  YVL++NI++AA +W+D    R  MK + V K P
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 838

Query: 832 ADLIFAKVEGLIKRIKEGGYVPDTDFVL----------LDVEEEEKERALYYHSEKLARA 881
                + +E  +KR      V DT   L          LDV+E+EKE +L  HSEK+A A
Sbjct: 839 G---CSWIE--VKRKLHSFVVGDTSHPLMEQISGKDGKLDVDEDEKEFSLCGHSEKIALA 893

Query: 882 YGLIST 887
           +GLIST
Sbjct: 894 FGLIST 899



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 146/327 (44%), Gaps = 41/327 (12%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS+L+    L   L L  Q+H   + N      F+ + L++VYC+ G + +A  +F+   
Sbjct: 93  ASILQKCRKL-YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             ++ +W A++  Y    +  + ++LF  M   G R D        KAC  L   + GK 
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           ++ Y +  GFE + CV   ILDM++KCG M  A+  F +I   D   W  M+SG    GE
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              AL     M+LSGV PD+ T+  ++                                 
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISG------------------------------- 300

Query: 634 LVDMYAKCGNIEDAYILFKQM----DMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
               YA+ G  E+A   F +M    D + N V W A++ G  Q+G   E L +F  M   
Sbjct: 301 ----YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYE 715
           GV+P+S+T    +SAC+   L+    E
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGRE 383



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 135/265 (50%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A+ ++ C  L  L+ G Q+HA  + +G ++   + S +L++Y + G + DA+ +F+ +  
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            +  +WT ++      G+ +  + +++ M   GV PD F F  + KA S L     G+ +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           +  ++ +    +  V  S++DM+ KCG ++ A   F++++ ++  +WN M+ G    G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           ++ LK   DMK  GV+PD VT+  ++S  + +G   EA + F  M      +P V  ++ 
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 736 LVDALGRAGRTKEAGELILSMPFEA 760
           L+    + G   EA  +   M  E 
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEG 357



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 6/237 (2%)

Query: 39  LPFLQKSHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           L F Q+ H      ++   S  L       +L LGK  H  +L +       + + L++M
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           YS C SL  A  +F ++  RD++ WNSI++A A SG            L R +  S    
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS-----VNALDLLREMNLSNVEV 598

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           + +T+   L  C     +   + +H + ++ GL    F+  +L+++Y + G I++++ +F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           D M +RD+V W VM+  Y  +GFG +  +LF      GL P+  +   +L   S  G
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSG 715



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 591 PDEFT--FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           PDE    +A +++    L  L  G Q+HA L+        F+G  L+++Y + G +EDA 
Sbjct: 85  PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            +F +M  RN   W A++      G+ EET+KLF  M   GV PD   F  V  ACS
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS 201


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 274/830 (33%), Positives = 407/830 (49%), Gaps = 133/830 (16%)

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL--- 267
           R A  LFD    +D+  +  +L  ++ N    E  HLF DLH SGL  D  ++ C L   
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 268 GVISD--LGKRHEEQVQAYAIKLLLYNNNS----------------------------NV 297
           GV+ D  +G+    QV   ++K     + S                            NV
Sbjct: 115 GVLFDQVVGR----QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V W   LSGY + G N   I     M    V  +  TF   L A+A    +  G Q+H  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
            +K+GF     V N+LI MY K   V                                  
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G++  +    + L+  S   E L+ +KQ+H   +KN       + TAL+ 
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRE-LNFTKQLHCGVVKNGYEFAQDIRTALMV 349

Query: 435 VYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            Y +  S+ EA  LF   D   ++ TW AMI G++ +NN+ KA++LF  M   G R +  
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T +T +      L+     Q+HA  +K+ +E    V++ +LD YVK G +V++  +F  I
Sbjct: 410 TYSTVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI 465

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA-SSCLTALEQG 612
           PA D VAW+ M++G     + + A+ ++ Q+   GV P+E+TF+ ++ A SS    +E G
Sbjct: 466 PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +QIHA  +K   S+   V  +L+ MY+K GNIE A  +F + + R+ V WN+M+ G  QH
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQH 585

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+ ++ L++F+ M+  G+  D VTFIGVL+AC++ GLV E  + F++M + Y I+ ++EH
Sbjct: 586 GDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEH 645

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           YS +VD   RAG   +A ++I  MPF AS ++ R LL ACRV  + E GK  AEKL++L+
Sbjct: 646 YSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQ 705

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------------- 831
           P D+  YVLLSNI A A  W++    R  M  + VKK+                      
Sbjct: 706 PNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSH 765

Query: 832 --ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
             +DL++AK+E L  ++K+ GY PDT++V  DVEEE KE  L  HSE+LA AYGLI+ PP
Sbjct: 766 PFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPP 825

Query: 890 SSVILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
            + I   K                           +NRFHH + G+C C 
Sbjct: 826 GAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCG 875



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 251/578 (43%), Gaps = 88/578 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D ++G+  H + L S  + D  +  +L+ MY +       R +FD+M  ++++SW S+L+
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            YA +G  +     E   L   ++      +  T A +L        +     VH   +K
Sbjct: 179 GYARNGLND-----EVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G  +  FV  AL+ +Y K   + +A+ +FD M  RD V W +M+  YA  GF  E F +
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 248 F-------VDLHRSGLCPD----------DESVQCVLGVISDLGKRHEEQVQAY------ 284
           F       V L R+  C            + + Q   GV+ + G    + ++        
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMVTYS 352

Query: 285 -------AIKLL-LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                  A KL  + +   NVV W   + G++Q  +N  A++ F  M R  V+ +  T+ 
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYS 412

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------ 384
             LA    +    L  Q+H   +K+ +     V  +L++ Y K G V             
Sbjct: 413 TVLAGKPSS----LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468

Query: 385 -------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                                          G++ +++T +SV+ A SS    +   KQI
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H  A+K+       VS+AL+ +Y + G++  AE +F  ++  D+ +WN+MI GY    ++
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--S 531
            KALE+F  M   G  LD++T    + AC    ++++G++     +K  + +D  +   S
Sbjct: 589 KKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD-YHIDKKIEHYS 647

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
            ++D+Y + G    A  I N +P P     W T+++ C
Sbjct: 648 CMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAAC 685



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 16/217 (7%)

Query: 67  SDLLLGKST------HARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           S +L GK +      HA+I+ +   ++P   +   L+  Y + G++V + R+F  +P +D
Sbjct: 412 STVLAGKPSSLLSQLHAQIIKAYYEKVPS--VATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS-GYVWA 177
           +++W+++L   A + +  +E   E F   + ++E +   +  T + ++  C SS   V  
Sbjct: 470 IVAWSAMLTGLAQTRD--SEKAMEVF--IQLVKEGVK-PNEYTFSSVINACSSSAATVEH 524

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  A+K G      VS AL+ +YSK G I  A+ +F   +ERD+V W  M+  Y +
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G  ++   +F  +   GL  DD +   VL   +  G
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 57  FSILRHAISTSDLLL--GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           FS + +A S+S   +  GK  HA  + S +     +++ L+TMYS+ G++  A ++F + 
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
            +RD++SWNS++  Y   G+       +   +F+ ++        +T   +L  C  +G 
Sbjct: 568 EERDIVSWNSMITGYGQHGDAK-----KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622

Query: 175 VWASETVHGYALKIGLVWDEFVS--GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
           V   E      +K   + D+ +     +V++YS+ G   +A  + +GM       +W+ +
Sbjct: 623 VEEGEKYFNIMIKDYHI-DKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681

Query: 232 LRA 234
           L A
Sbjct: 682 LAA 684


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/707 (33%), Positives = 370/707 (52%), Gaps = 91/707 (12%)

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           ++ +S   + G    A+     MI    +  S  F   L   A   +L  G+++H   LK
Sbjct: 16  SRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILK 75

Query: 361 SGFYSAVIVGNSLINMYSKMGCV------------------------------------- 383
           SG      + N+L++MY+K G +                                     
Sbjct: 76  SGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKC 135

Query: 384 ------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                  G + D+ T  S+L A ++ PE L L +++H+  ++     +  V T+L+ +Y 
Sbjct: 136 YETMKLAGCKPDKVTFVSLLNAFTN-PELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYA 194

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + G +++A  +F+     ++ TW  +I GY        ALEL   M  +    ++IT A+
Sbjct: 195 KCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFAS 254

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            ++ C     L+ GK++H Y ++SG+  +L V + ++ MY KCG + +A+ +F+D+P  D
Sbjct: 255 ILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V WT M++G    G  D A++++ +M+  G+ PD+ TF  ++ + S    L++G++IH 
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG-LAQHGNGE 676
            L+    + D ++  +LV MYAKCG+++DA ++F QM  RN V W A++ G  AQHG   
Sbjct: 375 QLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCR 434

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L+ F+ MK  G++PD VTF  VLSAC++ GLV E  ++F  M   YGI+P VEHYS  
Sbjct: 435 EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCF 494

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG  +EA  +ILSMPF    S+  ALL ACRV  D E G+  AE ++ L+P D 
Sbjct: 495 VDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDD 554

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
            AYV LS+I+AAA +++D    R  M++++V K+P                       ++
Sbjct: 555 GAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESE 614

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP---- 889
            I+ ++  L ++IKE GYVPDT FVL DV+EE+KER L+ HSE+LA  YGL+ TPP    
Sbjct: 615 QIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPI 674

Query: 890 -------------------SSVILSNKEPLYANRFHHLRDGMCPCAD 917
                              S V+        A RFHH  DG+C C D
Sbjct: 675 RIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGD 721



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 147/635 (23%), Positives = 268/635 (42%), Gaps = 134/635 (21%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+       L  G+  HA IL S   P+R+L N L++MY++CGSL  ARR+FD + DR+
Sbjct: 53  LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW +++ A+  +G  N     E F+ + +++ +     ++T   LL    +   +   
Sbjct: 113 IVSWTAMIEAFV-AGNKN----LEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLG 167

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + VH   ++ GL  +  V  +LV +Y+K G I +A+ +FD + E++VV W +++  YA+ 
Sbjct: 168 QKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQ 227

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIK------LLLY 291
           G  +    L   + ++ + P+  +   +L G  +     H ++V  Y I+      L + 
Sbjct: 228 GQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287

Query: 292 NN----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
           N+                      + +VV W   ++GY Q+G +  AI  F  M +  ++
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            D +TF   L + +    L  G++IH   + +G+   V + ++L++MY+K    CG   D
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAK----CGSMDD 403

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC-RNGSMAEAEYL 448
               AS++    S                + + VA     TA+I   C ++G   EA   
Sbjct: 404 ----ASLVFNQMS----------------ERNVVA----WTAIITGCCAQHGRCREALEY 439

Query: 449 FEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
           F+   K G      + + F  +LS  +H  L      H     LD               
Sbjct: 440 FDQMKKQGIKP---DKVTFTSVLSACTHVGLVEEGRKHFRSMYLD--------------- 481

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
                     Y +K   E   C     +D+  + G + +A+++   +P  P    W  ++
Sbjct: 482 ----------YGIKPMVEHYSC----FVDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           S C  + +                                   +E+G +   N++KLD  
Sbjct: 528 SACRVHSD-----------------------------------VERGERAAENVLKLD-P 551

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            D    ++L  +YA  G  EDA  + + M+ R+ V
Sbjct: 552 DDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 36/316 (11%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           F  L +A +  +LL LG+  H  I+ +    +  +  +L+ MY++CG +  AR +FD++P
Sbjct: 151 FVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP 210

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++++++W  ++A YA  G+     V     L  +++++    +++T A +L+ C +   +
Sbjct: 211 EKNVVTWTLLIAGYAQQGQ-----VDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH Y ++ G   + +V  +L+ +Y K G + EA+ LF  +  RDVV W  M+  Y
Sbjct: 266 EHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGY 325

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA-YAIKL 288
           A+ GF +E  +LF  + + G+ PD  +   VL   S       GKR H++ V A Y + +
Sbjct: 326 AQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDV 385

Query: 289 --------------------LLYNNNS--NVVLWNKKLSGYL-QVGDNHGAIECFVNMIR 325
                               L++N  S  NVV W   ++G   Q G    A+E F  M +
Sbjct: 386 YLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK 445

Query: 326 SNVQYDSVTFLVALAA 341
             ++ D VTF   L+A
Sbjct: 446 QGIKPDKVTFTSVLSA 461


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 248/713 (34%), Positives = 367/713 (51%), Gaps = 94/713 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N V WN  +S Y++      AI+ F  M+ S +Q     F   + A  G+ N++ G+Q+H
Sbjct: 73  NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 132

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CV------ 383
              ++ G+   V   N+L++MY KMG                          CV      
Sbjct: 133 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 192

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       GL  + F L+S+L+A +       L +QIH   IK +  +D ++   L
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAG-AGAFDLGRQIHGFMIKANADSDDYIGVGL 251

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D+Y +N  + +A  +F+     DL  WNA+I G        +A  +F  +   G  ++ 
Sbjct: 252 VDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNR 311

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+A  +K+   L      +Q+HA A K GF  D  V +G++D Y KC  + DA  +F +
Sbjct: 312 TTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 371

Query: 553 IPAPDDVAWTTMISGC--VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
             + D +A T+MI+     D+GE   A+ ++ +M   G+ PD F  + L+ A + L+A E
Sbjct: 372 CSSGDIIAVTSMITALSQCDHGEG--AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 429

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QG+Q+HA+LIK    SD F G +LV  YAKCG+IEDA + F  +  R  V W+AM+ GLA
Sbjct: 430 QGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLA 489

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           QHG+G+  L+LF  M   G+ P+ +T   VL AC++ GLV EA   F+ M+E +GI+   
Sbjct: 490 QHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTE 549

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHYS ++D LGRAG+  +A EL+ SMPF+A+AS+  ALLGA RV  D E GK  AEKL  
Sbjct: 550 EHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFI 609

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           LEP  S  +VLL+N +A++  W++V   R  MK  N+KK+PA                  
Sbjct: 610 LEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDK 669

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                  I++K++ L   + + GY+P+ D  L D++  EKE  L +HSE+LA A+ L+ST
Sbjct: 670 SHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST 729

Query: 888 PPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCAD 917
           PP + I   K                            NRFHH RDG C C D
Sbjct: 730 PPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGD 782



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/530 (22%), Positives = 216/530 (40%), Gaps = 97/530 (18%)

Query: 57  FSILRHAISTS-DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FS + +A + S ++  G+  HA ++      D F  N L+ MY + G +  A  +F+KMP
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 171

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D D++SWN++++    +G  +         L   ++ S    +   L+ +LK C  +G  
Sbjct: 172 DSDVVSWNALISGCVLNGHDH-----RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 226

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +HG+ +K     D+++   LV++Y+K   + +A  +FD M  RD++LW  ++   
Sbjct: 227 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 286

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAY---------- 284
           +  G  +E F +F  L + GL  +  ++  VL   + L       QV A           
Sbjct: 287 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA 346

Query: 285 ------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                             AI++    ++ +++     ++   Q     GAI+ F+ M+R 
Sbjct: 347 HVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK 406

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            ++ D       L A A       G+Q+H   +K  F S    GN+L+  Y+K G     
Sbjct: 407 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG----- 461

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                ++     A SSLPE                                         
Sbjct: 462 -----SIEDAELAFSSLPER---------------------------------------- 476

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
                     + +W+AMI G     +  +ALELF  M   G   + IT+ + + AC    
Sbjct: 477 ---------GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 527

Query: 507 MLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP 554
           ++ + K+ +  +MK  F +D      S ++D+  + G + DA  + N +P
Sbjct: 528 LVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 576



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  HA ++    + D F  N L+  Y++CGS+  A   F  +P+R
Sbjct: 417 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 476

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++SW++++   A  G G          LF  + +     + +T+  +L  C  +G V  
Sbjct: 477 GVVSWSAMIGGLAQHGHGK-----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 531

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           A    +      G+   E     ++++  + GK+ +A  L + M  + +  +W  +L A
Sbjct: 532 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 289/940 (30%), Positives = 445/940 (47%), Gaps = 125/940 (13%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MYSRCGSL  A   F K+  R+++SWN +++AY+     + ++  E   LF ++      
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYS-----SYKSFQEALALFHAMLLEGVA 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            + +TL  +L  C S   +     VH  +L+ G   +  V+ AL+N+Y K G + +A+ +
Sbjct: 56  PNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSV 115

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEV-FHLFVDLHRSGLCPDDESVQCVLGVISD--- 272
           F+ M E++VV W  ML  Y+  G   ++   LF  +   G+  +  +   VL  + D   
Sbjct: 116 FEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDA 175

Query: 273 --LGK------RHEEQVQAYAIKLLLYNNNS------------------NVVLWNKKLSG 306
              GK      R  E      +   L N  +                  +V  WN  +S 
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y     +  A   F  M +   + D VTFL  L A    + L  G+ +  +  ++ F   
Sbjct: 236 YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELD 295

Query: 367 VIVGNSLINMYSK-------------------------------------------MGCV 383
           + VG +LI MY++                                           M   
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQ 355

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G+  ++ T  S+L   ++ P GL    +IH+   ++     + +  AL++VY R  S  
Sbjct: 356 EGILPNRVTFISLLNGFTT-PSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A  +F+  +  +L +WN+MI  Y+       AL+LF  M   G + D +   T + AC 
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
                +  K +H    +SG      V + +++MY K G +  A+ I  ++      AW  
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNV 534

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           +I+G   +G    AL  Y +++L  +  D+ TF  ++ A +  T+L +G+ IH+N ++  
Sbjct: 535 LINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECG 594

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             SD  V  +L +MY+KCG++E+A  +F  M +R+ V WN ML   AQHG  EE LKL  
Sbjct: 595 LDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIR 654

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M+  GV+ + +TF+ VLS+CS+ GL++E  + FH +    GIE + EHY  LVD LGRA
Sbjct: 655 KMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRA 714

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G+ +EA + I  MP E       +LLGACRVQ D + GK  A KL+ L+P +SSA V+LS
Sbjct: 715 GKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLS 774

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           NI++    W +    R  M  + VKK P                       A  I+ KVE
Sbjct: 775 NIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVE 834

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
            L   ++E GYVPDT  VL DV+EE+KE  L YHSEKLA A+GLISTP +S +       
Sbjct: 835 ELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLR 894

Query: 894 --------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                         ++ +E +  +  RFHH RDG C C D
Sbjct: 895 VCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKD 934



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/590 (22%), Positives = 249/590 (42%), Gaps = 86/590 (14%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L   +    L  GK  H+ +  S    D F+   L+  Y++CGSL  AR++FD MP
Sbjct: 163 FLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP 222

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R + +WNS+++AY+ S     E   E F +F+ +++      R+T   +L  C++   +
Sbjct: 223 CRSVGTWNSMISAYSIS-----ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETL 277

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + V     +     D FV  AL+ +Y++     +A  +F  M++ +++ W  ++ A+
Sbjct: 278 QHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAF 337

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNN 294
           A++G   E    F  + + G+ P+  +   +L G  +  G     ++     +  L +  
Sbjct: 338 ADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTT 397

Query: 295 S----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           +                            N++ WN  +  Y+Q   +  A++ F  M + 
Sbjct: 398 TMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQ 457

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----- 381
            +Q D V F+  L A     +    + +H    +SG   + +V  SL+NMY+K G     
Sbjct: 458 GIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVA 517

Query: 382 --------------------------------------CVCGLRTDQFTLASVLRA---S 400
                                                  +  +  D+ T  SVL A   S
Sbjct: 518 EVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSS 577

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           +SL EG    K IH +A++    +D  V  AL ++Y + GSM  A  +F++       +W
Sbjct: 578 TSLAEG----KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSW 633

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAM 519
           N M+  Y     S + L+L   M   G +L+ IT  + + +C    ++ +G Q  H+   
Sbjct: 634 NGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGH 693

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             G E+       ++D+  + G + +A+   + +P  P  V W +++  C
Sbjct: 694 DRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGAC 743


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/798 (31%), Positives = 403/798 (50%), Gaps = 116/798 (14%)

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           KLC  +     ++ +H   +K     + F+   L+N YSK G I  A+ +FD M + +  
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI 286
            W  ML AY+++G                   D  ++Q +  ++                
Sbjct: 73  SWNTMLSAYSKSG-------------------DLSTMQEIFSIMP--------------- 98

Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV-QYDSVTFLVALAAVAGT 345
                  N + V WN  +SGY+  G    A++ + +M++  V   + +TF   L  V+  
Sbjct: 99  -------NRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQ 151

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
             ++LG+QIHG  +K GF + V VG+SL++MY+KMG V                      
Sbjct: 152 GCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLV---------------------- 189

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
              ++ Q+     + + V  + + T L+    R+G + +++ LF      D  +W  MI 
Sbjct: 190 --SVASQVFDEVQERNVVMYNTMITGLL----RSGMVKDSKRLFHGMKERDSISWTTMIT 243

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           G I +    +A++LF  M   G  +D+ T  + + ACG L  LK+GK++H   ++SG+  
Sbjct: 244 GLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNH 303

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           ++ V S ++DMY KC ++  A+++F  +   + V+WT M+ G   NG  + A+ ++  M+
Sbjct: 304 NVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQ 363

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
            +G+ PD+FT   ++ + + L +LE+G Q H   +     S   V  +L+ +Y KCG+IE
Sbjct: 364 RNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIE 423

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           D+  LF +M  R+ V W A++ G AQ G   ET+ LFE M   G++PD+VTFI VLSACS
Sbjct: 424 DSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACS 483

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
             GLV    + F  M + +GI P  +HY+ ++D  GRAGR +EA   I  MPF   +   
Sbjct: 484 RAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGW 543

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
             LL +CR+ G+ E GKW AE L+ L+P + + Y+LLS+I+AA  +W +V   R  M+ K
Sbjct: 544 ATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREK 603

Query: 826 NVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
             +K+P                       +D I+A++E L  ++ E GYVPD   VL DV
Sbjct: 604 GARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDV 663

Query: 863 EEEEKERALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY 901
           E+ EK + L +HSEKLA A+GL+  P   P  V+                  +S +E L 
Sbjct: 664 EDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILV 723

Query: 902 --ANRFHHLRDGMCPCAD 917
             A RFH  +DG C C D
Sbjct: 724 RDAVRFHLFKDGTCSCGD 741



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 240/601 (39%), Gaps = 148/601 (24%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           T +    K  H  I+ S   P+ FL NNL+  YS+ G++ YAR +FDKMP  +  SWN++
Sbjct: 18  TRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTM 77

Query: 126 LAAYAHSGE-----------GNAENVT-----EGFRLFRSLRESI-TFTS---------- 158
           L+AY+ SG+            N + V+      G+  + S+ E++ T+ S          
Sbjct: 78  LSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLN 137

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF----------- 207
           R+T + +L L  S G V     +HG  +K G     FV  +LV++Y+K            
Sbjct: 138 RITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFD 197

Query: 208 --------------------GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
                               G ++++K LF GM+ERD + W  M+    +NG   E   L
Sbjct: 198 EVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDL 257

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDL----------------GKRHEEQVQA-------- 283
           F D+ + G+  D  +   VL     L                G  H   V +        
Sbjct: 258 FRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCK 317

Query: 284 -----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                YA  +     N NVV W   L GY Q G +  A+  F +M R+ ++ D  T    
Sbjct: 318 CRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSV 377

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           +++ A   +L  G Q H   L SG  S + V N+LI +Y K    CG   D   L   + 
Sbjct: 378 ISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGK----CGSIEDSNQLFDEM- 432

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
                                  +  D    TAL+  Y + G                  
Sbjct: 433 -----------------------SFRDEVSWTALVSGYAQFG------------------ 451

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
                         +++ ++LF  M   G + D +T    + AC    ++++G+Q     
Sbjct: 452 -------------KANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESM 498

Query: 519 MKSGFELDLCVS-SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDL 576
           +K    +      + ++D++ + G + +A++  N +P +PD + W T++S C   G E++
Sbjct: 499 LKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEI 558

Query: 577 A 577
            
Sbjct: 559 G 559



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 10/190 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    + + L  G   H + L S  I    ++N L+T+Y +CGS+  + +LFD+M  R
Sbjct: 376 SVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFR 435

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SW ++++ YA  G+ N     E   LF  +         +T   +L  C  +G V  
Sbjct: 436 DEVSWTALVSGYAQFGKAN-----ETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER 490

Query: 178 SETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML--- 232
            +      LK  G++        +++++ + G++ EAK   + M    D + W  +L   
Sbjct: 491 GQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550

Query: 233 RAYAENGFGE 242
           R Y     G+
Sbjct: 551 RLYGNEEIGK 560


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 274/830 (33%), Positives = 406/830 (48%), Gaps = 133/830 (16%)

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL--- 267
           R A  LFD    +D+  +  +L  ++ N    E  HLF DLH SGL  D  ++ C L   
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 268 GVISD--LGKRHEEQVQAYAIKLLLYNNNS----------------------------NV 297
           GV+ D  +G+    QV   ++K     + S                            NV
Sbjct: 115 GVLFDQVVGR----QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V W   LSGY + G N   I     M    V  +  TF   L A+A    +  G Q+H  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
            +K+GF     V N+LI MY K   V                                  
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G++  +    + L+  S   E L+ +KQ+H   +KN       + TAL+ 
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRE-LNFTKQLHCGVVKNGYEFAQDIRTALMV 349

Query: 435 VYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            Y +  S+ EA  LF   D   ++ TW AMI G++ +NN+ KA++LF  M   G R +  
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T +T +      L+     Q+HA  +K+ +E    V++ +LD YVK G +V++  +F  I
Sbjct: 410 TYSTVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI 465

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA-SSCLTALEQG 612
           PA D VAW+ M++G     + + A+ ++ Q+   GV P+E+TF+ ++ A SS    +E G
Sbjct: 466 PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +QIHA  +K   S+   V  +L+ MY+K GNIE A  +F + + R+ V WN+M+ G  QH
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQH 585

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+ ++ L++F+ M+  G+  D VTFIGVL+AC++ GLV E  + F++M + Y I+ + EH
Sbjct: 586 GDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEH 645

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           YS +VD   RAG   +A ++I  MPF AS ++ R LL ACRV  + E GK  AEKL++L+
Sbjct: 646 YSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQ 705

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------------- 831
           P D+  YVLLSNI A A  W++    R  M  + VKK+                      
Sbjct: 706 PNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSH 765

Query: 832 --ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
             +DL++AK+E L  ++K+ GY PDT++V  DVEEE KE  L  HSE+LA AYGLI+ PP
Sbjct: 766 PFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPP 825

Query: 890 SSVILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
            + I   K                           +NRFHH + G+C C 
Sbjct: 826 GAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCG 875



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 250/578 (43%), Gaps = 88/578 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D ++G+  H + L S  + D  +  +L+ MY +       R +FD+M  ++++SW S+L+
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            YA +G  +     E   L   ++      +  T A +L        +     VH   +K
Sbjct: 179 GYARNGLND-----EVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G  +  FV  AL+ +Y K   + +A+ +FD M  RD V W +M+  YA  GF  E F +
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 248 F-------VDLHRSGLCPD----------DESVQCVLGVISDLGKRHEEQVQAY------ 284
           F       V L R+  C            + + Q   GV+ + G    + ++        
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMVTYS 352

Query: 285 -------AIKLL-LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                  A KL  + +   NVV W   + G++Q  +N  A++ F  M R  V+ +  T+ 
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYS 412

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------ 384
             LA    +    L  Q+H   +K+ +     V  +L++ Y K G V             
Sbjct: 413 TVLAGKPSS----LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468

Query: 385 -------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                                          G++ +++T +SV+ A SS    +   KQI
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H  A+K+       VS+AL+ +Y + G++  AE +F  ++  D+ +WN+MI GY    ++
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--S 531
            KALE+F  M   G  LD++T    + AC    ++++G++     +K  + +D      S
Sbjct: 589 KKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD-YHIDKKXEHYS 647

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
            ++D+Y + G    A  I N +P P     W T+++ C
Sbjct: 648 CMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAAC 685



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 16/217 (7%)

Query: 67  SDLLLGKST------HARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           S +L GK +      HA+I+ +   ++P   +   L+  Y + G++V + R+F  +P +D
Sbjct: 412 STVLAGKPSSLLSQLHAQIIKAYYEKVPS--VATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS-GYVWA 177
           +++W+++L   A + +  +E   E F   + ++E +   +  T + ++  C SS   V  
Sbjct: 470 IVAWSAMLTGLAQTRD--SEKAMEVF--IQLVKEGVK-PNEYTFSSVINACSSSAATVEH 524

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  A+K G      VS AL+ +YSK G I  A+ +F   +ERD+V W  M+  Y +
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G  ++   +F  +   GL  DD +   VL   +  G
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 13/184 (7%)

Query: 57  FSILRHAISTSDLLL--GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           FS + +A S+S   +  GK  HA  + S +     +++ L+TMYS+ G++  A ++F + 
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
            +RD++SWNS++  Y   G+       +   +F+ ++        +T   +L  C  +G 
Sbjct: 568 EERDIVSWNSMITGYGQHGDAK-----KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622

Query: 175 VWASETVHGYALK---IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKV 230
           V   E      +K   I    + +    +V++YS+ G   +A  + +GM       +W+ 
Sbjct: 623 VEEGEKYFNIMIKDYHIDKKXEHY--SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRT 680

Query: 231 MLRA 234
           +L A
Sbjct: 681 LLAA 684


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 275/875 (31%), Positives = 426/875 (48%), Gaps = 123/875 (14%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+ PLL    ++  +     +H + LK GL         L++ YSK      A+ +FD +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            +   V W  ++ AY+ N    +    F  +    +  ++  +  VL    D G   +  
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLH 123

Query: 281 VQAYAIKL------------------------LLYNN---NSNVVLWNKKLSGYLQVGDN 313
             A A  L                        ++++      N V WN  +S Y++    
Sbjct: 124 ALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRC 183

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A++ F  M+   VQ +   F   + A  G+ +L  G+++H   +++G+   V   N+L
Sbjct: 184 SHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANAL 243

Query: 374 INMYSKMG--------------------------CV-----------------CGLRTDQ 390
           ++MYSK+G                          CV                  GL  + 
Sbjct: 244 VDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNV 303

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           FTL+S+L+A +      +L +QIH   +K +  +D++++  L+D+Y ++G + +A+ +F+
Sbjct: 304 FTLSSILKACAG-SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFD 362

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                DL  WNA+I G        +AL LF  M   G  ++  T+A  +K+   L  +  
Sbjct: 363 WIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISD 422

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC-- 568
            +Q+HA A K GF  D  V +G++D Y KC  +  A  +F    + D +A+T+MI+    
Sbjct: 423 TRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQ 482

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
            D+GE+  A+ ++ +M   G+ PD F  + L+ A + L+A EQG+Q+HA+LIK    SD 
Sbjct: 483 CDHGED--AIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDV 540

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           F G +LV  YAKCG+IEDA + F  +  +  V W+AM+ GLAQHG+G+  L +F  M   
Sbjct: 541 FAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDE 600

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            + P+ +T   VL AC++ GLV EA   F+ M+E +GIE   EHY+ ++D LGRAG+  +
Sbjct: 601 HISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDD 660

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A EL+ SMPF+ +A++  ALL A RV  D E G+  AEKL  LEP  S  +VLL+N +A+
Sbjct: 661 AMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYAS 720

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
           A  WDDV   R  MK   VKK+P                       A  I+AK++ L   
Sbjct: 721 AGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDL 780

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA--- 902
           + + GYVP+ +  L DV++ EKE  L +HSE+LA A+ LISTP  + I   K        
Sbjct: 781 MTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDC 840

Query: 903 --------------------NRFHHLRDGMCPCAD 917
                               NRFHH RDG C C D
Sbjct: 841 HAAFKFISDIVSREIIIRDINRFHHFRDGACSCRD 875



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 34/313 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+    +    LG+  H  ++ ++   D ++   L+ MY++ G L  A+++FD +P R
Sbjct: 308 SILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQR 367

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+ WN++++  +H  +       E   LF  +R+     +R TLA +LK   S   +  
Sbjct: 368 DLVLWNALISGCSHGAQH-----AEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISD 422

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH  A K+G + D  V   L++ Y K   +  A  +F+     D++ +  M+ A ++
Sbjct: 423 TRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQ 482

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------- 287
              GE+   LF+++ R GL PD   +  +L   + L    + +QV A+ IK         
Sbjct: 483 CDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFA 542

Query: 288 --LLLYN-----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
              L+Y                      VV W+  + G  Q G    A++ F  M+  ++
Sbjct: 543 GNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHI 602

Query: 329 QYDSVTFLVALAA 341
             + +T    L A
Sbjct: 603 SPNHITMTSVLCA 615



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  HA ++    + D F  N L+  Y++CGS+  A   F  +P++
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEK 569

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++SW++++   A  G G          +F  + +     + +T+  +L  C  +G V  
Sbjct: 570 GVVSWSAMIGGLAQHGHGK-----RALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDE 624

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           A    +      G+   E     ++++  + GK+ +A  L + M  + +  +W  +L A
Sbjct: 625 AKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/801 (30%), Positives = 409/801 (51%), Gaps = 117/801 (14%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LLKLC  +     ++ +H + +K     + F+   L++ Y+K G I  A  +FD M   +
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           +  W  +L AY++ G   E+ +LF  + R                               
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPRR------------------------------ 104

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD--SVTFLVALAAV 342
                      + V WN  +SGY   G  + +++ +  M++++  ++   +TF   L   
Sbjct: 105 -----------DGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILA 153

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           +    + LG+QIHG  +K GF S V VG+ L++MYSKMG +   R          +    
Sbjct: 154 SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR----------KVFDE 203

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           LPE             KN  + ++ +   +     R G + +++ LF      D  +W +
Sbjct: 204 LPE-------------KNVVMYNTLIMGLM-----RCGRVEDSKRLFFEMRERDSISWTS 245

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI G+  +     A+++F  M     ++D+ T  + + ACG ++ L++GKQ+HAY +++ 
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           ++ ++ V+S ++DMY KC  +  A+++F  +   + V+WT M+ G   NG  + A+  + 
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            M+  G+ PD+FT   ++ + + L +LE+G Q HA  +     S   V  +LV +Y KCG
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           +IED++ LF ++  ++ V W A++ G AQ G   ET+ LFE M AHG++PD VTFIGVLS
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           ACS  GLV +  + F  M  ++GI P  +HY+ ++D   RAGR +EA   I  MPF   A
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDA 545

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
                LL +CR  G+ + GKW AE LM L+P ++++YVLLS+++AA  +W++V   R +M
Sbjct: 546 ISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDM 605

Query: 823 KRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
           + K ++K+P                       +D I++++E L  ++ + GYVPD + VL
Sbjct: 606 RDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVL 665

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKE 898
            DV + EK + L +HSEKLA A+GL+  PP   I                     ++N+E
Sbjct: 666 HDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNRE 725

Query: 899 PLYAN--RFHHLRDGMCPCAD 917
            L  +  RFH  +DG C C D
Sbjct: 726 ILVRDTARFHLFKDGTCSCGD 746



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/619 (22%), Positives = 247/619 (39%), Gaps = 159/619 (25%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + + ++L+    T +    K+ H+ I+ +   P+ FL NNL++ Y++ GS+ YA ++FD+
Sbjct: 10  NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 69

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTS------------- 158
           MP  +L SWN+IL+AY+  G      V+E   LF ++  R+ +++ S             
Sbjct: 70  MPHPNLYSWNTILSAYSKLGR-----VSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQ 124

Query: 159 ------------------RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
                             R+T + LL L    G V     +HG+ +K G +   FV   L
Sbjct: 125 SVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPL 184

Query: 201 VNIYSKF-------------------------------GKIREAKFLFDGMQERDVVLWK 229
           V++YSK                                G++ ++K LF  M+ERD + W 
Sbjct: 185 VDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWT 244

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKL 288
            M+  + +NG   +   +F ++    L  D  +   VL     +    E +QV AY I+ 
Sbjct: 245 SMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT 304

Query: 289 LLYNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECF 320
              +N                              NVV W   L GY Q G +  A++ F
Sbjct: 305 DYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTF 364

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            +M +  ++ D  T    +++ A   +L  G Q H   L SG  S + V N+L+ +Y K 
Sbjct: 365 SDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKC 424

Query: 381 GCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
           G                    S+ +   L  +I        +  D    TAL+  Y + G
Sbjct: 425 G--------------------SIEDSHRLFNEI--------SFKDEVTWTALVSGYAQFG 456

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
              E   LFE+                               M   G + D++T    + 
Sbjct: 457 KANETIGLFES-------------------------------MLAHGLKPDKVTFIGVLS 485

Query: 501 ACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDD 558
           AC    ++++G Q+  +   + G        + ++D++ + G + +A++  N +P +PD 
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDA 545

Query: 559 VAWTTMISGCVDNGEEDLA 577
           ++W T++S C   G  D+ 
Sbjct: 546 ISWATLLSSCRFYGNMDIG 564



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 27/249 (10%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGK--------- 73
           F K T +N+ S++  L+ + Q  +  S  +   +  + ++ I   D  LG          
Sbjct: 333 FKKMTCKNVVSWTAMLVGYGQNGY--SEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLA 390

Query: 74  ------STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
                   HAR L S  I    ++N L+T+Y +CGS+  + RLF+++  +D ++W ++++
Sbjct: 391 SLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVS 450

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL- 186
            YA  G+ N     E   LF S+        ++T   +L  C  +G V     +    + 
Sbjct: 451 GYAQFGKAN-----ETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGE 242
           + G+V  +     +++++S+ G+I EA+   + M    D + W  +L   R Y     G+
Sbjct: 506 EHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGK 565

Query: 243 EVFHLFVDL 251
                 ++L
Sbjct: 566 WAAEFLMEL 574


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/749 (33%), Positives = 363/749 (48%), Gaps = 130/749 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNH--GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +VV W+  ++ Y   G+NH   A + F  M  +N++ + +TFL  L A      L   ++
Sbjct: 143 DVVTWSSMIAAY--AGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKARE 200

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           IH     SG  + V V  +LI MYSK G +                              
Sbjct: 201 IHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRK 260

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G+  +  T  S+L  S + PE L+  ++IH H  +     D  V+ 
Sbjct: 261 LNEAFELYEKMLQAGISPNAVTFVSLLN-SCNTPEALNRGRRIHSHISERGLETDVVVAN 319

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-----ALELFSHMHT 485
           ALI +YC+   + +A   F+     D+ +W+AMI GY  S    K       +L   M  
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G   +++T  + +KAC     L+QG+Q+HA   K GFE D  + + I +MY KCG++ +
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYE 439

Query: 546 AQSIFNDIPAPDDVAWTT-------------------------------MISGCVDNGEE 574
           A+ +F+ +   + VAW +                               MI+G   +G+ 
Sbjct: 440 AEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDI 499

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
                +   M++ G  PD  T   +++A   L+ALE+G+ +HA  +KL   SD  V  SL
Sbjct: 500 AKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSL 559

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           + MY+KCG + +A  +F ++  R+TV WNAML G  QHG G E + LF+ M    V P+ 
Sbjct: 560 IGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNE 619

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           +TF  V+SAC   GLV E  E F +M+E + ++P  +HY  +VD LGRAGR +EA E I 
Sbjct: 620 ITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQ 679

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            MP E   S+  ALLGAC+   + +  +W A  ++ LEP ++S YV LSNI+A A +WDD
Sbjct: 680 RMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDD 739

Query: 815 VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
            T  R  M  K +KKD                         D I A++E L K +KE GY
Sbjct: 740 STKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGY 799

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------ 893
            PD  FVL DV+E +KERAL +HSEKLA AYGL+ TPP + I                  
Sbjct: 800 TPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKF 859

Query: 894 ---LSNKEPLY--ANRFHHLRDGMCPCAD 917
              +  +E +   ANRFH+ ++G C C D
Sbjct: 860 ISKIRKREIVARDANRFHYFKNGTCSCGD 888



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 311/661 (47%), Gaps = 73/661 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S+ +  I+ H         GK  H ++       D +L N+L+  YS+ G +    ++F
Sbjct: 77  NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
            +M  RD+++W+S++AAYA    GN  +  + F  F  ++++    +R+T   +LK C +
Sbjct: 137 RRMTLRDVVTWSSMIAAYA----GN-NHPAKAFDTFERMKDANIEPNRITFLSILKACNN 191

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +  +  +H      G+  D  V+ AL+ +YSK G+I  A  +F  M+ER+VV W  +
Sbjct: 192 YSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAI 251

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI 286
           ++A A++    E F L+  + ++G+ P+  +   +L   +     + G+R    +    +
Sbjct: 252 IQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 311

Query: 287 KLLLYNNNS------------------------NVVLWNKKLSGYLQVG--DNHGAIECF 320
           +  +   N+                        +V+ W+  ++GY Q G  D     E F
Sbjct: 312 ETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVF 371

Query: 321 V---NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
                M R  V  + VTF+  L A +    L  G+QIH    K GF S   +  ++ NMY
Sbjct: 372 QLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMY 431

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
           +K G                         ++ ++Q+       + VA      +L+ +Y 
Sbjct: 432 AKCG------------------------SIYEAEQVFSKMENKNVVA----WASLLTMYI 463

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + G +  AE +F      ++ +WN MI GY  S +  K  EL S M   G + D +TI +
Sbjct: 464 KCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIIS 523

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            ++ACG L  L++GK +HA A+K G E D  V++ ++ MY KCG + +A+++F+ I   D
Sbjct: 524 ILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRD 583

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            VAW  M++G   +G    A+ ++ +M    V P+E TF  ++ A      +++GR+I  
Sbjct: 584 TVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIF- 642

Query: 618 NLIKLDCSSDP---FVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHG 673
            +++ D    P     G  +VD+  + G +++A    ++M     + +W+A+L     H 
Sbjct: 643 RIMQEDFRMKPGKQHYG-CMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHD 701

Query: 674 N 674
           N
Sbjct: 702 N 702



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 180/351 (51%), Gaps = 6/351 (1%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H    +     D ++  +LI+ Y + G +A  E +F      D+ TW++MI  Y  +
Sbjct: 98  KMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGN 157

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           N+  KA + F  M  +    + IT  + +KAC    ML++ +++H     SG E D+ V+
Sbjct: 158 NHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVA 217

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++ MY KCG +  A  IF  +   + V+WT +I     + + + A  +Y +M  +G+ 
Sbjct: 218 TALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGIS 277

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P+  TF  L+ + +   AL +GR+IH+++ +    +D  V  +L+ MY KC  I+DA   
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337

Query: 651 FKQMDMRNTVLWNAMLVGLAQHG-----NGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           F +M  R+ + W+AM+ G AQ G     + +E  +L E M+  GV P+ VTF+ +L ACS
Sbjct: 338 FDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS 397

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
             G + +  +  H    K G E +    + + +   + G   EA ++   M
Sbjct: 398 VHGALEQGRQ-IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 179/411 (43%), Gaps = 56/411 (13%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S ++  + S+L    +   L  G+  H+ I       D  + N L+TMY +C  +  AR 
Sbjct: 277 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARE 336

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
            FD+M  RD+ISW++++A YA SG  + E++ E F+L   +R    F +++T   +LK C
Sbjct: 337 TFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
              G +     +H    K+G   D  +  A+ N+Y+K G I EA+ +F  M+ ++VV W 
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWA 456

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
            +L  Y +                   C D  S +    V S++  R             
Sbjct: 457 SLLTMYIK-------------------CGDLTSAE---KVFSEMSTR------------- 481

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 NVV WN  ++GY Q GD     E   +M     Q D VT +  L A      L 
Sbjct: 482 ------NVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALE 535

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSL---- 403
            G+ +H   +K G  S  +V  SLI MYSK G V   RT  D+ +    +  ++ L    
Sbjct: 536 RGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYG 595

Query: 404 -----PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                PE + L K++    +K     +    TA+I    R G + E   +F
Sbjct: 596 QHGIGPEAVDLFKRM----LKERVPPNEITFTAVISACGRAGLVQEGREIF 642



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 121/231 (52%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A++L   +   G  ++  T    ++ C  L   + GK +H    + G  +D+ + + ++
Sbjct: 61  EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           + Y K G +   + +F  +   D V W++MI+    N     A   + +M+ + + P+  
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  ++KA +  + LE+ R+IH  +      +D  V  +L+ MY+KCG I  A  +F++M
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
             RN V W A++   AQH    E  +L+E M   G+ P++VTF+ +L++C+
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/827 (32%), Positives = 419/827 (50%), Gaps = 127/827 (15%)

Query: 213 AKFLFDGMQERDVVLWK--VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           A  LFD +  R   L +   +L +Y+ +   +E  +LFV L  S L PD+ ++ CV  + 
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 271 S-DLGKRHEEQVQAYAIKLLLYNNNS----------------------------NVVLWN 301
           +  L  +   QV    +K  L ++ S                            NVV W 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             L+GY   G      E F  M    V  +  T    +AA+     + +G Q+H   +K 
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 362 GFYSAVIVGNSLINMYSKMGCV-------------------------------------- 383
           GF  A+ V NSLI++YS++G +                                      
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283

Query: 384 -----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                 G++    T ASV+++ +SL E L L K +   A+K+    D  V TAL+    +
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRE-LALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 439 NGSMAEAEYLFE-NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
              M +A  LF   ++G ++ +W AMI G + +  + +A+ LFS M   G + +  T + 
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +     + +     +MHA  +K+ +E    V + +LD YVK G  +DA  +F  I A D
Sbjct: 403 ILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL-EQGRQIH 616
            +AW+ M++G    GE + A  ++HQ+   G+ P+EFTF+ ++ A +  TA  EQG+Q H
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFH 518

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  IK+  ++   V  +LV MYAK GNI+ A+ +FK+   R+ V WN+M+ G +QHG  +
Sbjct: 519 AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAK 578

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + L++F++M+   ++ D+VTFIGV++AC++ GLV +  + F+ M   + I P ++HYS +
Sbjct: 579 KALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCM 638

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D   RAG  ++A  +I  MPF   A++ R LLGA RV  + E G+  AEKL++L+P DS
Sbjct: 639 IDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDS 698

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
           +AYVLLSN++AAA  W + T+ R  M ++ VKK+P                       ++
Sbjct: 699 AAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSN 758

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS--- 890
            I++K+  L  R+K+ GY PDT  V  D+E+E+KE  L +HSE+LA A+GLI+TPP    
Sbjct: 759 QIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPI 818

Query: 891 ---------------SVILSNKEPLY-----ANRFHHLRDGMCPCAD 917
                          + ++S  E  Y     +NRFHH +DG+C C D
Sbjct: 819 QIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGD 865



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 154/633 (24%), Positives = 269/633 (42%), Gaps = 102/633 (16%)

Query: 14  KHTYVIFS-SFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLG 72
           +H  ++FS S  K T   L  F +SLL      H S     S    +      + D  LG
Sbjct: 60  EHNQLLFSYSRDKQTKEALNLF-VSLL------HSSLQPDESTLSCVFNICAGSLDGKLG 112

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  H + +    +    +  +L+ MY +  ++   RR+FD+M +R+++SW S+LA Y+ +
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWN 172

Query: 133 GEGNAENVTEGF--RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
           G         G+   LF  ++      +R T++ ++   ++ G V     VH   +K G 
Sbjct: 173 G-------LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGF 225

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
                V  +L+++YS+ G +R+A+ +FD M+ RD V W  M+  Y  NG   EVF +F  
Sbjct: 226 EEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNK 285

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL--------------------- 289
           +  +G+ P   +   V+   + L  R    V+    K L                     
Sbjct: 286 MQLAGVKPTHMTFASVIKSCASL--RELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343

Query: 290 -----------LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                      L     NVV W   +SG LQ G N  A+  F  M R  V+ +  T+   
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTY--- 400

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------- 384
            +A+          ++H   +K+ +  +  VG +L++ Y K+G                 
Sbjct: 401 -SAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDL 459

Query: 385 -----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G++ ++FT +SV+ A +S        KQ H 
Sbjct: 460 MAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHA 519

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           +AIK        VS+AL+ +Y + G++  A  +F+ +   DL +WN+MI GY     + K
Sbjct: 520 YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKK 579

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGI 533
           ALE+F  M      +D +T    + AC    ++++G Q +  +M +   ++  +   S +
Sbjct: 580 ALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKG-QKYFNSMINDHHINPTMKHYSCM 638

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
           +D+Y + G +  A  I N++P  P    W T++
Sbjct: 639 IDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA  +         +++ L+TMY++ G++  A  +F +  +RDL+SWNS+++ Y+ 
Sbjct: 514 GKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQ 573

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G+       +   +F  +++       +T   ++  C  +G V   +          ++
Sbjct: 574 HGQAK-----KALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFN-----SMI 623

Query: 192 WDEFVS------GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            D  ++        ++++YS+ G + +A  + + M       +W+ +L A
Sbjct: 624 NDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA 673


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 257/803 (32%), Positives = 402/803 (50%), Gaps = 124/803 (15%)

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LK C  +      + +H   ++     + F+   L+N Y K G ++ A+ +FD + + ++
Sbjct: 12  LKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL 71

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYA 285
             W  +L AY++ G+ +++  +F  +                                  
Sbjct: 72  FSWNTLLSAYSKLGYLQDMQRVFDSM---------------------------------- 97

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAG 344
                   N +VV WN  LSGY   G    ++  +  M++  +V  + +TF   L   + 
Sbjct: 98  -------PNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSN 150

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
              ++LG+QIHG   K G+ S + VG+ L++MY+K G +              R    +P
Sbjct: 151 RGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFI----------NDANRIFEEIP 200

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           E             KN  V ++ ++  L    CR   + EAE LF+N    D  +W  +I
Sbjct: 201 E-------------KNIVVYNTMITGLL---RCR--FIVEAEQLFDNMPEKDSISWTTII 242

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            G   +    +A++ F  M   G  +D+ T  + + ACG  L L +GKQ+HAY +++ ++
Sbjct: 243 TGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQ 302

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            ++ V S +LDMY KC  +  A+++F  +   + ++WT M+ G   NG  + A+ I+  M
Sbjct: 303 DNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDM 362

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGIS--LVDMYAK 640
           + + + PD+FT   ++ + + L +LE+G Q H   +   L C    FV +S  L+ +Y K
Sbjct: 363 QRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLIC----FVTVSNALITLYGK 418

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG++E A+ LF +M +R+ V W A++ G AQ G   ET+ LFE M AHG+ PD VTF+GV
Sbjct: 419 CGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGV 478

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS  GLV + Y  F  M +++ I P  +HY+ ++D L RAGR +EA   I  MPF  
Sbjct: 479 LSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSP 538

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            A     LL +CR+ G+ E GKW AE L  LEP + ++Y+LLS+I+AA  +WDDV   R 
Sbjct: 539 DAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRK 598

Query: 821 EMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDF 857
            M+   VKK+P                       +D I+AK+E L  ++ E GYVPD  F
Sbjct: 599 GMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSF 658

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSN 896
           VL DVE+ EK + L +HSEKLA A+GL+  P    I                     ++ 
Sbjct: 659 VLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQ 718

Query: 897 KEPLY--ANRFHHLRDGMCPCAD 917
           +E L   A RFH  +DG+C C D
Sbjct: 719 REILVRDAVRFHLFKDGVCSCGD 741



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 146/617 (23%), Positives = 234/617 (37%), Gaps = 148/617 (23%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           SSSS+ + + L+      +    K  H RI+ +   P+ FL NNL+  Y + G L  AR 
Sbjct: 2   SSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARN 61

Query: 110 LFDKMPDRDLISWNSILAAYAHSG------------------------EGNAEN--VTEG 143
           +FD +P  +L SWN++L+AY+  G                         G A N  ++E 
Sbjct: 62  VFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISES 121

Query: 144 FRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
            R++   L++     +R+T + +L L  + G+V     +HG   K G     FV   LV+
Sbjct: 122 VRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVD 181

Query: 203 IYSKFGKIR-------------------------------EAKFLFDGMQERDVVLWKVM 231
           +Y+K G I                                EA+ LFD M E+D + W  +
Sbjct: 182 MYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTI 241

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLL 290
           +    +NG  +E    F ++   G C D  +   VL      L     +Q+ AY I+   
Sbjct: 242 ITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301

Query: 291 YNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N                            + NV+ W   L GY Q G +  A+  F +
Sbjct: 302 QDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCD 361

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M R+ +  D  T    +++ A   +L  G Q HG  L SG    V V N+LI +Y K G 
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCG- 420

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                              SL     L      H +K   + D    TAL+  Y + G  
Sbjct: 421 -------------------SLEHAHQL-----FHEMK---IRDEVSWTALVSGYAQFGKA 453

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            E   LFE                                M   G   D +T    + AC
Sbjct: 454 NETISLFET-------------------------------MLAHGIVPDGVTFVGVLSAC 482

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVS-SGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
               ++++G       +K      +    + ++D+  + G + +A++  N +P +PD + 
Sbjct: 483 SRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIG 542

Query: 561 WTTMISGCVDNGEEDLA 577
           W T++S C  NG  ++ 
Sbjct: 543 WATLLSSCRLNGNLEIG 559


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 277/964 (28%), Positives = 453/964 (46%), Gaps = 122/964 (12%)

Query: 71   LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
            +GK+ HA  +      + F TN L+ MYS+ GS+ YA+ +FDKM DR+  SWN++++ + 
Sbjct: 165  VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 131  HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIG 189
              G  +     +  + F  + E+    S   +A ++  C  SG +   +  +HGY +K G
Sbjct: 225  RVGWYH-----KAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCG 279

Query: 190  LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
            L+ + FV  +L++ Y   G + EA  LF+ ++E ++V W  ++  YA+NG  +EV +++ 
Sbjct: 280  LMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYR 339

Query: 250  DLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLL------------------ 290
             L  +GL     ++  V+      G K    Q+    IK  L                  
Sbjct: 340  HLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNY 399

Query: 291  ---------YNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                     +NN    + + WN  ++     G    ++  F  M R++ + D +T    L
Sbjct: 400  DSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALL 459

Query: 340  AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC----------------- 382
             A     +L  G+ +HG   KSG  S V V NSL++MY++ G                  
Sbjct: 460  PACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLI 519

Query: 383  ----------------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                  V  L+T +         + S    L   K +H   I  
Sbjct: 520  SWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHF 579

Query: 421  DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                +  +   L+ +Y + G M EA+ + +     D+ TWNA+I G+    + +  ++ F
Sbjct: 580  AVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAF 639

Query: 481  SHMHTSGERLDEITIATAVKACGCL-LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
            + M   G   + ITI   +  C     +LK G  +HA+ + +GFELD  V S ++ MY +
Sbjct: 640  NLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQ 699

Query: 540  CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
            CG +  +  IF+ +   +   W  + S     G  + AL    +MR  GV  D+F+F++ 
Sbjct: 700  CGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVA 759

Query: 600  VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
            +     LT L++G+Q+H+ +IKL    D +V  + +DMY KCG I+D + +     +R+ 
Sbjct: 760  LATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSK 819

Query: 660  VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
              WN ++  LA+HG   +  + F +M   G++PD VTF+ +LSACS+ GLV E    F  
Sbjct: 820  RSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSS 879

Query: 720  MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
            M  ++G+   +EH   ++D LGR+GR  EA   I  MP   +  + R+LL AC+V G+ E
Sbjct: 880  MTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLE 939

Query: 780  TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
             G+  A++L  L   D SAYVL SN+ A+  +W DV + R +M+ +++KK PA       
Sbjct: 940  LGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLK 999

Query: 833  ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                              I+AK+E L K  +E G++PDT + L D +EE+KE  L+ HSE
Sbjct: 1000 NKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSE 1059

Query: 877  KLARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRDGMC 913
            ++A A+GLI++   S +   K                             RFHH   G C
Sbjct: 1060 RIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKC 1119

Query: 914  PCAD 917
             C+D
Sbjct: 1120 SCSD 1123



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 121/548 (22%), Positives = 215/548 (39%), Gaps = 105/548 (19%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S   L  G+  H  I  S    +  + N+L++MY++ GS   A  +F  MP RDLISWNS
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNS 523

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++A++   G+      +    L   + ++    + +T    L  C +   +   + VH +
Sbjct: 524 MMASHVEDGK-----YSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAF 575

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +   +  +  +   LV +Y KFG + EA+ +   M ERDVV W  ++  +A++      
Sbjct: 576 VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNAT 635

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVI--SDLGKRHEEQVQAYAIK-------------LL 289
              F  + R GL  +  ++  +LG     D   +H   + A+ +              + 
Sbjct: 636 IQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLIT 695

Query: 290 LYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y                 N N   WN   S     G    A++    M    V  D  +
Sbjct: 696 MYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFS 755

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
           F VALA +     L+ GQQ+H   +K GF     V N+ ++MY K    CG   D F + 
Sbjct: 756 FSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGK----CGEIDDVFRIL 811

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
            + +  S     +                        LI    R+G   +A   F     
Sbjct: 812 PIPKIRSKRSWNI------------------------LISALARHGFFRQATEAF----- 842

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                              H+ L+L       G + D +T  + + AC    ++ +G  +
Sbjct: 843 -------------------HEMLDL-------GLKPDHVTFVSLLSACSHGGLVDEG-LV 875

Query: 515 HAYAMKSGF----ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCV 569
           +  +M S F     ++ CV   I+D+  + G + +A+   + +P  P++  W ++++ C 
Sbjct: 876 YFSSMTSEFGVPTAIEHCVC--IIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACK 933

Query: 570 DNGEEDLA 577
            +G  +L 
Sbjct: 934 VHGNLELG 941



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L K  S ++    G+ +HA  +K     + F   +LV+MY+K G+I+ A  +F +M  RN
Sbjct: 153 LQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRN 212

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
              WN M+ G  + G   + ++ F  M  +GV P S     +++AC  +G ++E     H
Sbjct: 213 DASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIH 272

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
               K G+   V   + L+   G  G   EA +L
Sbjct: 273 GYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKL 306


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 280/878 (31%), Positives = 425/878 (48%), Gaps = 127/878 (14%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           +++PLL    ++  ++    +H + LK GL+        L++ YSK      A+ +FD  
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            +   V W  ++ AY+ N    E    F  +   G+  ++ ++  VL    D G     Q
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL--GVQ 121

Query: 281 VQAYAIKLLLYNN-----------------------------NSNVVLWNKKLSGYLQVG 311
           V A A+   L  +                             + N V WN  +S +++  
Sbjct: 122 VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKND 181

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A+E F  M+ S V+ +   F   + A  G+ +L  G+++H   +++G+   V   N
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241

Query: 372 SLINMYSKMG--------------------------CV-----------------CGLRT 388
           +L++MYSK+G                          CV                  GL  
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301

Query: 389 DQFTLASVLRASSSLPEGLHLS-KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           + FTL+S+L+A +    G     +QIH   IK    +D ++  AL+D+Y + G + +A  
Sbjct: 302 NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARK 361

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +FE     DL  WNA+I G        ++L LF  M   G  ++  T+A  +K+   L  
Sbjct: 362 VFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEA 421

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           +    Q+HA A K GF  D  V +G++D Y KC  +  A  +F +  + + +A+T+MI+ 
Sbjct: 422 ISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITA 481

Query: 568 C--VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
               D+GE+  A+ ++ +M   G+ PD F  + L+ A + L+A EQG+Q+HA+LIK    
Sbjct: 482 LSQCDHGED--AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFM 539

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +D F G +LV  YAKCG+IEDA + F  +  +  V W+AM+ GLAQHG+G+  L +F  M
Sbjct: 540 TDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRM 599

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
               + P+ +T   VL AC++ GLV EA   F  M+E +GI+   EHYS ++D LGRAG+
Sbjct: 600 VDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGK 659

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             +A EL+ SMPFEA+A++  ALL A RV  D E GK  AEKL  LEP  S  +VLL+N 
Sbjct: 660 LDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANT 719

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
           +A+A  WD+V   R  MK   VKK+P                       A  I+AK+E L
Sbjct: 720 YASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEEL 779

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA 902
              + + GYVP+ +  L DV++ EKE  L +HSE+LA A+ LISTP  + I   K     
Sbjct: 780 GDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRIC 839

Query: 903 -----------------------NRFHHLRDGMCPCAD 917
                                  NRFHH  DG C C D
Sbjct: 840 RDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGD 877



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 7/240 (2%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           SLSL   ++K    S  + +   ++L+   S   +      HA       + D  + N L
Sbjct: 390 SLSLFCRMRKE--GSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGL 447

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           +  Y +C  L YA ++F++    ++I++ S++ A +    G      +  +LF  +    
Sbjct: 448 IDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGE-----DAIKLFMEMLRKG 502

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                  L+ LL  C S       + VH + +K   + D F   ALV  Y+K G I +A 
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             F G+ ++ VV W  M+   A++G G+    +F  +    + P+  ++  VL   +  G
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S S    GK  HA ++    + D F  N L+  Y++CGS+  A   F  +PD+
Sbjct: 512 SLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDK 571

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SW++++   A  G G          +FR + +     + +TL  +L  C  +G V  
Sbjct: 572 GVVSWSAMIGGLAQHGHGK-----RALDVFRRMVDERIAPNHITLTSVLCACNHAGLV-- 624

Query: 178 SETVHGY--ALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            +   GY  ++K   G+   E     ++++  + GK+ +A  L + M  E +  +W  +L
Sbjct: 625 -DEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALL 683

Query: 233 RA 234
            A
Sbjct: 684 AA 685


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 254/798 (31%), Positives = 395/798 (49%), Gaps = 97/798 (12%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R   A LL+L +S   +   + +HG  +  GL  D F++  L+N+ SK  ++  A+ +FD
Sbjct: 27  RREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFD 86

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDLGKRH 277
            M  ++++ W  M+  Y++ G+ EE   +FVDL R SG  P++  +  V+   + LG   
Sbjct: 87  KMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVE 146

Query: 278 E-EQVQAYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYL 308
           +  Q+  + ++             +  Y+ N N+               V W   ++GY 
Sbjct: 147 KGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYT 206

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G +  ++E F  M  +NV  D       L+A +  + L  G+QIH   L+ G    V 
Sbjct: 207 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 266

Query: 369 VGNSLINMYSKMGCV-------------------------------------------CG 385
           V N LI+ Y+K   V                                            G
Sbjct: 267 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 326

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + D F   SVL +  S  E L   +Q+H + IK +  +D FV   LID+Y ++  + +A
Sbjct: 327 WKPDGFACTSVLTSCGS-REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDA 385

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
           + +F+     ++ ++NAMI GY       +ALELF  M         +T  + +     L
Sbjct: 386 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASL 445

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+  KQ+H   +K G  LDL   S ++D+Y KC  + DA+ +F ++   D V W  M 
Sbjct: 446 FALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMF 505

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   + E + AL +Y  ++ S   P+EFTFA L+ A+S L +L  G+Q H  L+K+   
Sbjct: 506 FGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 565

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
             PFV  +LVDMYAKCG+IE+A  +F     R+ V WN+M+   AQHG  EE L +F +M
Sbjct: 566 FCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREM 625

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G++P+ VTF+ VLSACS+ G V +   +F+ M   +GI+P  EHY+ +V  LGR+G+
Sbjct: 626 MKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGK 684

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA E I  MP E +A + R+LL ACR+ G+ E GK+ AE  ++ +P DS +Y+LLSNI
Sbjct: 685 LFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNI 744

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFAK------------VEGLI 843
           FA+   W DV   R  M    V K+P           ++  A+            ++ LI
Sbjct: 745 FASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREADIGSVLDILI 804

Query: 844 KRIKEGGYVPDTDFVLLD 861
           + IK  GYVPD   +L++
Sbjct: 805 QHIKGAGYVPDATALLMN 822



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 144/654 (22%), Positives = 245/654 (37%), Gaps = 152/654 (23%)

Query: 3   TQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSH--------FS--SSSS 52
           TQL    K    H +V+ S F +D Y        SL+ F  K+         F   S  +
Sbjct: 140 TQLGVVEKGAQLHGFVVRSGFDQDVY-----VGTSLIDFYSKNGNIEEARLVFDQLSEKT 194

Query: 53  SSQWFSIL-------RHAIS------------------TSDLLL----------GKSTHA 77
           +  W +I+       R A+S                   S +L           GK  HA
Sbjct: 195 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 254

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
            +L      D  + N L+  Y++C  +   R+LFD+M  +++ISW ++++ Y  +     
Sbjct: 255 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD-- 312

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
               E  +LF  +              +L  C S   +     VH Y +K  L  DEFV 
Sbjct: 313 ---WEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVK 369

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+++Y+K   + +AK +FD M E++V+ +  M+  Y+      E   LF ++      
Sbjct: 370 NGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFP 429

Query: 258 PDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYN-------------------- 292
           P   +   +LGV +     +L K+    +  + + L L+                     
Sbjct: 430 PSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHV 489

Query: 293 ----NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
               N  ++V+WN    GY Q  +N  A++ +  +  S  + +  TF   + A +   +L
Sbjct: 490 FEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASL 549

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
             GQQ H   +K G      V N+L++MY+K    CG                S+ E   
Sbjct: 550 RHGQQFHNQLVKMGLDFCPFVTNALVDMYAK----CG----------------SIEEARK 589

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           +                 F S+   DV C                      WN+MI  + 
Sbjct: 590 M-----------------FNSSIWRDVVC----------------------WNSMISTHA 610

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHAYAMKSGFE 524
               + +AL +F  M   G + + +T    + AC     ++ G      M  + +K G E
Sbjct: 611 QHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTE 670

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
              CV S    +  + G + +A+     +P  P  + W +++S C   G  +L 
Sbjct: 671 HYACVVS----LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELG 720



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 2/167 (1%)

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           +++  + P    FA L++ S     +   + IH  +I     SD F+   L+++ +K   
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLS 702
           +++A ++F +M  +N + W++M+   +Q G  EE L +F D+ +  G  P+      V+ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           AC+  G+V +  +  H    + G + +V   + L+D   + G  +EA
Sbjct: 138 ACTQLGVVEKGAQ-LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA 183


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 273/947 (28%), Positives = 454/947 (47%), Gaps = 137/947 (14%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MYS+ G + YA+ +FD+M +R+  SWN +++ Y   G     +  E    FR +      
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVG-----SYVEAVLFFRDICGIGIK 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASE--TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
            S   +A L+  C  S  + A E    HG+A+K GL++D FV  + V+ Y+ +G +  A+
Sbjct: 56  PSGFMIASLVTACNKSS-IMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQ 114

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVIS 271
            +F+ M +R+VV W  ++ +Y++NG  +EV + +  +   G+C ++ ++  V+   G + 
Sbjct: 115 KMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLM 174

Query: 272 DLGKRH-----------EEQVQAYAIKLLLYN---------------NNSNVVLWNKKLS 305
           D+   H           E +V A    + ++                N  + + WN  +S
Sbjct: 175 DIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIIS 234

Query: 306 GYLQVGDNHGAIECF--VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
              Q   +  +   F  + ++   + Y +++ L+++      D L  G+ +HG  +K G 
Sbjct: 235 ANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICG--SVDYLKWGKGVHGLAVKYGL 292

Query: 364 YSAVIVGNSLINMYSKMG--------------------------------CVCGLRT--- 388
            S + + N+L+++YS  G                                C+C L+    
Sbjct: 293 ESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAE 352

Query: 389 --------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
                   +  T  S L A    PE     K +H   +      +  +   LI  Y +  
Sbjct: 353 MLWMKKEINYVTFTSALAACLD-PEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCH 411

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH---TSGERLDEITIAT 497
            MAEA+ +F+     D  TWNA+I G+  +   ++A+  F  M    TSG  +D ITI  
Sbjct: 412 KMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSG--VDYITIVN 469

Query: 498 AVKACGCLL-MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
            + +C     ++K G  +HA+ + +GF+LD  V S ++ MY KCG +  +  IF+ +   
Sbjct: 470 ILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFK 529

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
               W  +I+     G  + AL +  +MR +G+  D+F F+  +  ++ L  LE+G+Q+H
Sbjct: 530 TSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLH 589

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
            + IKL    D F+  + +DMY KCG ++DA  +  Q   R+ + WN ++   A+HG   
Sbjct: 590 GSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFH 649

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           +  + F DM   GV+P+ V+F+ +LSACS+ GLV E    +  M   YGI+P +EH   +
Sbjct: 650 KAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCM 709

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D LGR+GR  EA   I  MP   +  + R+LL +CR+  + + G+  A+ L+ L+P D 
Sbjct: 710 IDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDD 769

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
           SAYVL SN+FA   +W+DV   RG+M    ++K PA                       +
Sbjct: 770 SAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQME 829

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV- 892
            I  K+ GL+K + E GYVPDT + L D +EE+KE  ++ HSE++A A+GLI+ P  S  
Sbjct: 830 QINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTV 889

Query: 893 ---------------------ILSNKEPLY-ANRFHHLRDGMCPCAD 917
                                +L  K  L    RFHH  +G C C+D
Sbjct: 890 RIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSD 936



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 161/682 (23%), Positives = 292/682 (42%), Gaps = 104/682 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H   +    I D F+  + +  Y+  G +  A+++F++MPDR+++SW S++ +Y+ 
Sbjct: 78  GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSD 137

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        E    ++ +R      +   +A ++  C     +     + G+ALK GL 
Sbjct: 138 NGSKK-----EVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLE 192

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF--- 248
                + +L+ ++   G I EA  +F+ M ERD + W  ++ A A+N   EE F  F   
Sbjct: 193 TKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWM 252

Query: 249 ---------------------VD-------LHRSGLCPDDESVQC----VLGVISDLGKR 276
                                VD       +H   +    ES  C    +L V SD G+ 
Sbjct: 253 RLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRS 312

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
            + ++      +       +++ WN  L+ Y+Q G    A++ F  M+    + + VTF 
Sbjct: 313 KDAEL------IFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFT 366

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM---------------- 380
            ALAA    +    G+ +HG  +  G    +I+GN+LI  Y K                 
Sbjct: 367 SALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKL 426

Query: 381 ------------------------------GCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
                                         G   G+  D  T+ ++L +  +  + +   
Sbjct: 427 DKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYG 484

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
             IH H +      D  V ++LI +Y + G +  + Y+F+       + WNA+I      
Sbjct: 485 IPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARY 544

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +AL+L   M ++G   D+   +TA+     L ML++G+Q+H   +K GFELD  + 
Sbjct: 545 GFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFII 604

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDD---VAWTTMISGCVDNGEEDLALSIYHQMRLS 587
           +  +DMY KCG + DA  I   +P P D   ++W T+IS    +G+   A   +H M   
Sbjct: 605 NAAMDMYGKCGELDDALRI---LPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKL 661

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV--GISLVDMYAKCGNIE 645
           GV P+  +F  L+ A S    +++G   +A++  +     P +   + ++D+  + G + 
Sbjct: 662 GVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSV-YGIQPGIEHCVCMIDLLGRSGRLV 720

Query: 646 DAYILFKQMDM-RNTVLWNAML 666
           +A     +M +  N ++W ++L
Sbjct: 721 EAEAFITEMPIPPNDLVWRSLL 742



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 250/590 (42%), Gaps = 108/590 (18%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D++LG       L           N+L+ M+  CG +  A  +F++M +RD ISWNSI++
Sbjct: 175 DIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIIS 234

Query: 128 AYAHSGEGNAENV--TEGFRLFRSLR---ESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
           A       NA+N    E FR F  +R   E I +T   TL+ LL +C S  Y+   + VH
Sbjct: 235 A-------NAQNTLHEESFRYFHWMRLVHEEINYT---TLSILLSICGSVDYLKWGKGVH 284

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
           G A+K GL  +  +   L+++YS  G+ ++A+ +F  M ERD++ W  ML  Y ++G   
Sbjct: 285 GLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCL 344

Query: 243 EVFHLFVDL-----------HRSGL--CPDDE---------SVQCVLGVISDL------- 273
               +F ++             S L  C D E             VLG+  +L       
Sbjct: 345 CALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLI 404

Query: 274 ---GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR---SN 327
              GK H+    A A K+       + V WN  + G+    + + A+  F  M     S 
Sbjct: 405 TFYGKCHK---MAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSG 461

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
           V Y ++  ++  + +   D +  G  IH  T+ +GF     V +SLI MY+K G +    
Sbjct: 462 VDYITIVNILG-SCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSS 520

Query: 384 ---------------------------------------CGLRTDQFTLASVLRASSSLP 404
                                                   G+  DQF  ++ L  ++ L 
Sbjct: 521 YIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLA 580

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             L   +Q+H   IK     D F+  A +D+Y + G + +A  +          +WN +I
Sbjct: 581 M-LEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLI 639

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAM 519
                    HKA E F  M   G + + ++    + AC    ++ +G   +A     Y +
Sbjct: 640 SISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGI 699

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           + G E  +C    ++D+  + G +V+A++   ++P  P+D+ W ++++ C
Sbjct: 700 QPGIEHCVC----MIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASC 745



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 103/218 (47%), Gaps = 6/218 (2%)

Query: 58  SILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +IL   ++  DL+  G   HA  + +    D+ + ++L+TMY++CG L  +  +FD++  
Sbjct: 469 NILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVF 528

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +    WN+I+AA A  G G      E  +L   +R +     +   +  L +      + 
Sbjct: 529 KTSSVWNAIIAANARYGFGE-----EALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLE 583

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +HG  +K+G   D F+  A +++Y K G++ +A  +     +R  + W  ++   A
Sbjct: 584 EGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISA 643

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +G   +    F D+ + G+ P+  S  C+L   S  G
Sbjct: 644 RHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGG 681


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 247/749 (32%), Positives = 360/749 (48%), Gaps = 130/749 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNH--GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +VV W+  ++ Y   G+NH   A + F  M  +N++ + +TFL  L A      L  G++
Sbjct: 121 DVVTWSSMIAAY--AGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRK 178

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           IH      G  + V V  +LI MYSK G +                              
Sbjct: 179 IHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRK 238

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G+  +  T  S+L  S + PE L+  ++IH H  +     D  V+ 
Sbjct: 239 LNEAFELYEQMLQAGISPNAVTFVSLLN-SCNTPEALNRGRRIHSHISERGLETDMIVAN 297

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-----ALELFSHMHT 485
           ALI +YC+  S+ EA  +F+     D+ +W+AMI GY  S    K       +L   M  
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI------------ 533
            G   +++T  + ++AC     L+QG+Q+HA   K GFELD  + + I            
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYE 417

Query: 534 -------------------LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
                              L MY+KCG +  A+ +F+++P  + V+W  MI+G   NG+ 
Sbjct: 418 AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDI 477

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
                +   M+  G  PD  T   +++A   L  LE+G+ +HA  +KL   SD  V  SL
Sbjct: 478 VKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSL 537

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           + MY+KCG + +A  +F +M  R+TV WNAML G  QHG+G E + LF+ M    V P+ 
Sbjct: 538 IGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNE 597

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           +T   V+SACS  GLV E  E F +M+E + + P  +HY  +VD LGRAGR +EA E I 
Sbjct: 598 ITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQ 657

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
           SMP E   S+  ALLGAC+   + +  +  A  ++ LEP  +S Y+ LSNI+A A +WDD
Sbjct: 658 SMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDD 717

Query: 815 VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
            T  R  M  + +KKD                         D I A++E L K +KE GY
Sbjct: 718 STKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGY 777

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------ 893
            PD  FVL DV++ +KE+AL +HSEKLA AYGL+ TP  + I                  
Sbjct: 778 TPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKF 837

Query: 894 ---LSNKEPLY--ANRFHHLRDGMCPCAD 917
              +  +E +   ANRFH+  +G C C D
Sbjct: 838 ISKIRKREIVARDANRFHYFNNGTCSCGD 866



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 171/661 (25%), Positives = 310/661 (46%), Gaps = 73/661 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S+ +  ++ H         GK  H ++       D +L N+L+  YS+   +  A ++F
Sbjct: 55  NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
            +M  RD+++W+S++AAYA    GN  +  + F  F  + ++    +R+T   +LK C +
Sbjct: 115 RRMTLRDVVTWSSMIAAYA----GN-NHPAKAFDTFERMTDANIEPNRITFLSILKACNN 169

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +     +H     +G+  D  V+ AL+ +YSK G+I  A  +F  M ER+VV W  +
Sbjct: 170 YSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAI 229

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR---------- 276
           ++A A++    E F L+  + ++G+ P+  +   +L   +     + G+R          
Sbjct: 230 IQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 289

Query: 277 HEEQVQAYAIKLLLYNNNS--------------NVVLWNKKLSGYLQVG--DNHGAIECF 320
             + + A A+  +    NS              +V+ W+  ++GY Q G  D     E F
Sbjct: 290 ETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVF 349

Query: 321 V---NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
                M R  V  + VTF+  L A      L  G+QIH    K GF     +  ++ NMY
Sbjct: 350 QLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMY 409

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
           +K G                         ++ ++Q+       + VA     T+ + +Y 
Sbjct: 410 AKCG------------------------SIYEAEQVFSKMANKNVVA----WTSFLSMYI 441

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + G ++ AE +F      ++ +WN MI GY  + +  K  EL S M   G + D +T+ T
Sbjct: 442 KCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVIT 501

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            ++ACG L  L++GK +HA A+K G E D  V++ ++ MY KCG + +A+++F+ +   D
Sbjct: 502 ILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRD 561

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            VAW  M++G   +G+   A+ ++ +M    V P+E T   ++ A S    +++GR+I  
Sbjct: 562 TVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIF- 620

Query: 618 NLIKLDCSSDP---FVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHG 673
            +++ D    P     G  +VD+  + G +++A    + M     + +W+A+L     H 
Sbjct: 621 RMMQEDFKMTPRKQHYG-CMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHN 679

Query: 674 N 674
           N
Sbjct: 680 N 680



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D ++  +LI+ Y +   +A AE +F      D+ TW++MI  Y  +N+  KA + F  M 
Sbjct: 90  DIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
            +    + IT  + +KAC    +L++G+++H      G E D+ V++ ++ MY KCG + 
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A  +F+ +   + V+WT +I     + + + A  +Y QM  +G+ P+  TF  L+ + +
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
              AL +GR+IH+++ +    +D  V  +L+ MY KC ++++A  +F +M  R+ + W+A
Sbjct: 270 TPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSA 329

Query: 665 MLVGLAQHG-----NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           M+ G AQ G     + +E  +L E M+  GV P+ VTF+ +L AC+  G + +  +  H 
Sbjct: 330 MIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQ-IHA 388

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
              K G E +    + + +   + G   EA ++   M
Sbjct: 389 ELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 60/365 (16%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S ++  + S+L    +   L  G+  H+ I       D  + N L+TMY +C S+  AR 
Sbjct: 255 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEARE 314

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +FD+M  RD+ISW++++A YA SG  + E++ E F+L   +R    F +++T   +L+ C
Sbjct: 315 IFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK--------------- 214
            + G +     +H    K+G   D  +  A+ N+Y+K G I EA+               
Sbjct: 375 TAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWT 434

Query: 215 -FL---------------FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
            FL               F  M  R+VV W +M+  YA+NG   +VF L   +   G  P
Sbjct: 435 SFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQP 494

Query: 259 DDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN------------------------ 293
           D  +V  +L     L G    + V A A+KL L ++                        
Sbjct: 495 DRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVF 554

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               N + V WN  L+GY Q GD   A++ F  M++  V  + +T    ++A +    + 
Sbjct: 555 DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQ 614

Query: 350 LGQQI 354
            G++I
Sbjct: 615 EGREI 619



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 140/282 (49%), Gaps = 1/282 (0%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A++L   +   G  ++  T    ++ C      + GK +H    + G E+D+ + + ++
Sbjct: 39  EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           + Y K   +  A+ +F  +   D V W++MI+    N     A   + +M  + + P+  
Sbjct: 99  NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  ++KA +  + LE+GR+IH  +  +   +D  V  +L+ MY+KCG I  A  +F +M
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             RN V W A++   AQH    E  +L+E M   G+ P++VTF+ +L++C+    ++   
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG- 277

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
              H    + G+E ++   + L+    +    +EA E+   M
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 260/787 (33%), Positives = 399/787 (50%), Gaps = 97/787 (12%)

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   D   S   V  + K G++ +A+ LF+ M  ++ V   +M+  Y ++G   E  
Sbjct: 39  VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 98

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LF           D  V+                                 V W   + 
Sbjct: 99  KLF-----------DGMVE------------------------------RTAVTWTILIG 117

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY Q+     A E FV M R   + D VTF+  L+   G +  N   Q+    +K G+ S
Sbjct: 118 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDS 177

Query: 366 AVIVGNSLINMYSK---MGCVCGL-----RTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            +IVGN+L++ Y K   +   C L       D FT A+VL A+  L + + L +QIH   
Sbjct: 178 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGL-DDIVLGQQIHSFV 236

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           IK + V + FVS AL+D Y ++ S+ +A  LF+     D  ++N +I GY        A 
Sbjct: 237 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           +LF  +  +     +   AT +      L  + G+Q+HA  + +  + ++ V + ++DMY
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 356

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG   +A+ IF ++     V WT MIS  V  G  +  L ++++MR + V+ D+ TFA
Sbjct: 357 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFA 416

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            L++AS+ + +L  G+Q+H+ +IK    S+ F G +L+D+YAKCG+I+DA   F++M  R
Sbjct: 417 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 476

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N V WNAM+   AQ+G  E TLK F++M   G++PDSV+F+GVLSACS++GLV E   +F
Sbjct: 477 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 536

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           + M + Y ++P  EHY+ +VD L R+GR  EA +L+  MP +    M  ++L ACR+  +
Sbjct: 537 NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 596

Query: 778 TETGKWVAEKLMALEPF-DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---- 832
            E  +  A++L  +E   D++ YV +SNI+AAA QW++V+     M+ + VKK PA    
Sbjct: 597 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWV 656

Query: 833 -------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                              + I  K++ L K ++E GY PDT   L + +E+ K  +L Y
Sbjct: 657 EIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKY 716

Query: 874 HSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRD 910
           HSE+LA A+ LISTP  S IL  K                           + RFHH RD
Sbjct: 717 HSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRD 776

Query: 911 GMCPCAD 917
           G C C D
Sbjct: 777 GFCSCGD 783



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 249/582 (42%), Gaps = 84/582 (14%)

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-G 135
           ARI+ +   PD   +N  +  + + G L  AR+LF+KMP ++ +S N +++ Y  SG  G
Sbjct: 36  ARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLG 95

Query: 136 NAENVTEG-------------------------FRLFRSLRESITFTSRLTLAPLLKLCL 170
            A  + +G                         F LF  ++   T    +T   LL  C 
Sbjct: 96  EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC- 154

Query: 171 SSGYVWASETVHGYALKIGLVWDE--FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
            +G+   ++        I L +D    V   LV+ Y K  ++  A  LF  M E D   +
Sbjct: 155 -NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF 213

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKL 288
             +L A      G +   L   +H   +  +      V   + D   +H+  + A   KL
Sbjct: 214 AAVLCA----NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDAR--KL 267

Query: 289 LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                  + V +N  +SGY   G +  A + F  +  +        F   L+  + T + 
Sbjct: 268 FDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDW 327

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------- 383
            +G+QIH  T+ +   S ++VGNSL++MY+K G                           
Sbjct: 328 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 387

Query: 384 ------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
                               +  DQ T AS+LRAS+S+   L L KQ+H   IK+  +++
Sbjct: 388 VQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIA-SLSLGKQLHSFIIKSGFMSN 446

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            F  +AL+DVY + GS+ +A   F+     ++ +WNAMI  Y  +  +   L+ F  M  
Sbjct: 447 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 506

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAM 543
           SG + D ++    + AC    ++++G   H  +M   ++LD      + ++DM  + G  
Sbjct: 507 SGLQPDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 565

Query: 544 VDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +A+ +  ++P  PD++ W+++++ C  +  ++LA     Q+
Sbjct: 566 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQL 607



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 44/381 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L   I   D++LG+  H+ ++ ++ + + F++N L+  YS+  S++ AR+LFD+MP++
Sbjct: 215 AVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ 274

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +S+N I++ YA  G+         F LFR L+ +     +   A +L +  ++     
Sbjct: 275 DGVSYNVIISGYAWDGKHKY-----AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +      +  V  +LV++Y+K GK  EA+ +F  +  R  V W  M+ AY +
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN--- 293
            GF EE   LF  + ++ +  D  +   +L   + +      +Q+ ++ IK    +N   
Sbjct: 390 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                    + N+V WN  +S Y Q G+    ++ F  M+ S +
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509

Query: 329 QYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI---VGNSLINMYS 378
           Q DSV+FL  L+A +       G  + N   QI+    +   Y++V+     +   N   
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 569

Query: 379 KMGCVCGLRTDQFTLASVLRA 399
           K+     +  D+   +SVL A
Sbjct: 570 KLMAEMPIDPDEIMWSSVLNA 590



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 164/413 (39%), Gaps = 68/413 (16%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN--------------- 451
           L++   I    +K     D+  S   +  + +NG +++A  LFE                
Sbjct: 28  LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 87

Query: 452 --KDG--------FD------LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
             K G        FD        TW  +I GY   N   +A ELF  M   G   D +T 
Sbjct: 88  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            T +  C    M  Q  Q+    +K G++  L V + ++D Y K   +  A  +F ++P 
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 207

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
                                               D FTFA ++ A+  L  +  G+QI
Sbjct: 208 -----------------------------------IDSFTFAAVLCANIGLDDIVLGQQI 232

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H+ +IK +   + FV  +L+D Y+K  ++ DA  LF +M  ++ V +N ++ G A  G  
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           +    LF +++    +     F  +LS  S T L  E     H        + E+   + 
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNT-LDWEMGRQIHAQTIVTTADSEILVGNS 351

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           LVD   + G+ +EA E+I +     SA    A++ A   +G  E G  +  K+
Sbjct: 352 LVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM 403


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 302/988 (30%), Positives = 469/988 (47%), Gaps = 142/988 (14%)

Query: 65   STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
            ++S L      H ++  +    D F  N L+ +Y R G+LV AR+LFD+MP ++L+SW+ 
Sbjct: 152  TSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSC 211

Query: 125  ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY--VWASETVH 182
            +++ Y  +   +     E   LF+ +  S    +   +   L+ C   G   +     +H
Sbjct: 212  LISGYTQNRMPD-----EACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIH 266

Query: 183  GYALKIGLVWDEFVSGALVNIYSKF-GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
             +  K+  V D  +S  L+++YS   G I +A  +FD ++ R+ V W  ++  Y   G  
Sbjct: 267  AFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDA 326

Query: 242  EEVFHLFVDLHRSG----LCPDDESV-----------QCVLGVISDLGKRHEEQ------ 280
               F LF  +   G    L P++ ++            C L ++  +  R E+       
Sbjct: 327  VSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDL 386

Query: 281  ------VQAYA-------IKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                  V  +A        K++     + N V  N  + G  +      A + F  M + 
Sbjct: 387  YVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KD 445

Query: 327  NVQYDSVTFLVALAAVAGTDNLN----LGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMG 381
             V+ +S + +V L+      NL      GQ++H    +SG   A I +GN+L+NMY K  
Sbjct: 446  LVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCT 505

Query: 382  CV------------------------------------C-------GLRTDQFTLASVLR 398
             +                                    C       G+    F++ S L 
Sbjct: 506  AIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLS 565

Query: 399  ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
            + SSL   L L +QIH    K     D  VS AL+ +Y    S+ E + +F     +D  
Sbjct: 566  SCSSLG-WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV 624

Query: 459  TWNAMIFGYILSNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN+ I        S  +AL+ F  M  +G R + +T    + A     +L  G Q+HA 
Sbjct: 625  SWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHAL 684

Query: 518  AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDL 576
             +K     D  + + +L  Y KC  M D + IF+ +    D+V+W +MISG + +G    
Sbjct: 685  ILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHK 744

Query: 577  ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
            A+ +   M   G   D FTFA ++ A + +  LE+G ++HA  ++    SD  VG +LVD
Sbjct: 745  AMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVD 804

Query: 637  MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
            MYAKCG I+ A   F+ M +RN   WN+M+ G A+HG+G++ LK+F  MK HG  PD VT
Sbjct: 805  MYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVT 864

Query: 697  FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            F+GVLSACS+ GLV E Y++F  M E YG+ P +EH+S +VD LGRAG  K+  + I +M
Sbjct: 865  FVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTM 924

Query: 757  PFEASASMHRALLGA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            P + +  + R +LGA CR  G +TE G+  A+ L+ LEP ++  YVLLSN+ AA   W+D
Sbjct: 925  PMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWED 984

Query: 815  VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
            V  AR  M++  VKKD                         + I+ K++ L+ +I++ GY
Sbjct: 985  VVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGY 1044

Query: 852  VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI--STPPSSVI---------------- 893
            VP+T + L D+E E KE  L YHSEKLA A+ L   S  P  ++                
Sbjct: 1045 VPETKYALYDLELENKEELLSYHSEKLAIAFVLTRKSELPIRIMKNLRVCGDCHTAFKYI 1104

Query: 894  --LSNKEPLY--ANRFHHLRDGMCPCAD 917
              +  ++ +   +NRFHH   GMC C D
Sbjct: 1105 SKIVGRQIILRDSNRFHHFGGGMCSCGD 1132



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 6/258 (2%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V ++SF     +   S   +L  FL+        +   + +IL    S S L LG   HA
Sbjct: 624 VSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHA 683

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGN 136
            IL  S   D  + N L+  Y +C  +     +F +M + RD +SWNS+++ Y HSG   
Sbjct: 684 LILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGI-- 741

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
              + +   L   + +        T A +L  C S   +     VH  A++  L  D  V
Sbjct: 742 ---LHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
             ALV++Y+K GKI  A   F+ M  R++  W  M+  YA +G G++   +F  + + G 
Sbjct: 799 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858

Query: 257 CPDDESVQCVLGVISDLG 274
            PD  +   VL   S +G
Sbjct: 859 SPDHVTFVGVLSACSHVG 876



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 34/316 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S L    S   L LG+  H          D  ++N L+T+Y+   S+   +++F +MP+ 
Sbjct: 562 STLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY 621

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWNS + A A        +V +  + F  + ++    +R+T   +L    S   +  
Sbjct: 622 DQVSWNSFIGALAKY----EASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGL 677

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYA 236
              +H   LK  +  D  +  AL+  Y K  ++ + + +F  M E RD V W  M+  Y 
Sbjct: 678 GHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYL 737

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQA------- 283
            +G   +   L   + + G   D  +   VL   + +       + H   V+A       
Sbjct: 738 HSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVV 797

Query: 284 ----------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                           YA +        N+  WN  +SGY + G    A++ F  M +  
Sbjct: 798 VGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHG 857

Query: 328 VQYDSVTFLVALAAVA 343
              D VTF+  L+A +
Sbjct: 858 QSPDHVTFVGVLSACS 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 24/207 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  G   HA  + +    D  + + L+ MY++CG + YA R F+ MP R
Sbjct: 766 TVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR 825

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           ++ SWNS+++ YA  G G      +  ++F  +++       +T   +L  C   G V  
Sbjct: 826 NIYSWNSMISGYARHGHGQ-----KALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDE 880

Query: 176 -----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWK 229
                 +   V+G + +I    + F    +V++  + G +++ +     M  + ++++W+
Sbjct: 881 GYKHFKSMGEVYGLSPRI----EHF--SCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWR 934

Query: 230 VML----RAYAENG-FGEEVFHLFVDL 251
            +L    RA   N   G+    + ++L
Sbjct: 935 TVLGACCRANGRNTELGQRAAKMLIEL 961


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 277/894 (30%), Positives = 428/894 (47%), Gaps = 144/894 (16%)

Query: 68   DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
            D+ LGK  H  ++      + F   +L+ MYS+CGSLV AR++FD + D D +SW +++A
Sbjct: 197  DIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIA 256

Query: 128  AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
             Y   G        E  ++F  ++                                   K
Sbjct: 257  GYVQVGLPE-----EALKVFEDMQ-----------------------------------K 276

Query: 188  IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            +GLV D+     ++      G++ +A  LF  M   +VV W VM+  + + G   E    
Sbjct: 277  LGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDF 336

Query: 248  FVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN------------- 293
            F ++ ++G+     ++  VL  I+ L    +   V A AIK  L +N             
Sbjct: 337  FKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAK 396

Query: 294  ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                             N+VLWN  L GY Q G     ++ F  M       D  T+   
Sbjct: 397  CEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSI 456

Query: 339  LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
            L+A A  + L +G+Q+H   +K  F   + V N+L++MY+K G +               
Sbjct: 457  LSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDN 516

Query: 384  ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                         G+  D+ +LAS+L   ++L + L   +Q+H 
Sbjct: 517  VSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANL-QALEQGEQVHC 575

Query: 416  HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
              +K+      +  ++LID+Y + G++  A Y+F       + + NA+I GY   N+  +
Sbjct: 576  FLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA-QNDLVE 634

Query: 476  ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD---LCVSSG 532
            A++LF  M   G    EIT A+ + AC     L  G+Q+H    K G   D   L VS  
Sbjct: 635  AIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVS-- 692

Query: 533  ILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +L MY+      DA  +F++   P   + WT +ISG   NG  + AL +Y +M  +   P
Sbjct: 693  LLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARP 752

Query: 592  DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
            D+ TFA +++A S L +L  GR IH+ +  +   SD   G ++VDMYAKCG+++ +  +F
Sbjct: 753  DQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVF 812

Query: 652  KQMDMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
            ++M  +N V+ WN+M+VG A++G  E  LK+F++MK   + PD VTF+GVL+ACS+ G V
Sbjct: 813  EEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRV 872

Query: 711  SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            SE  E F +M   Y I P ++H + ++D LGR G  KEA E I  + FE +A +   LLG
Sbjct: 873  SEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLG 932

Query: 771  ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
            ACR+ GD   G+  AEKL+ LEP +SS YVLLSNI+AA+  WD+V S R  M+ K ++K 
Sbjct: 933  ACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKL 992

Query: 831  P-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
            P                       A  I A ++ LI  +KE GY+ +TD +L D
Sbjct: 993  PGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAETDSLLED 1046



 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 223/731 (30%), Positives = 370/731 (50%), Gaps = 63/731 (8%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K+ HA+ L         L + ++ +Y++CG++ +A + F+++  RD+++WNS+L+ Y  S
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY--S 158

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            +G+ E V      F SL+      ++ T A +L  C     +   + VH   +K+G  +
Sbjct: 159 RQGSLEQV---IWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF 215

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           + F  G+L+++YSK G + +A+ +FD + + D V W  M+  Y + G  EE   +F D+ 
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           + GL PD  +   V+     LG+  +      A  L +   N+NVV WN  +SG+++ G 
Sbjct: 276 KLGLVPDQVAFVTVITACVGLGRLDD------ACDLFVQMPNTNVVAWNVMISGHVKRGC 329

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
           +  AI+ F NM ++ V+    T    L+A+A  + LN G  +H   +K G  S V VG+S
Sbjct: 330 DIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSS 389

Query: 373 LINMYSKMGCV-------------------------------------------CGLRTD 389
           LINMY+K   +                                           CG   D
Sbjct: 390 LINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPD 449

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           +FT  S+L A + L E L + +Q+H   IK++   + FV   L+D+Y + G++ EA   F
Sbjct: 450 EFTYTSILSACACL-ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF 508

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E     D  +WNA+I GY+   +  +A  +F  M   G   DE+++A+ +  C  L  L+
Sbjct: 509 EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALE 568

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           QG+Q+H + +KSG +  L   S ++DMYVKCGA+  A+ +F+ +P+   V+   +I+G  
Sbjct: 569 QGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA 628

Query: 570 DNGEEDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            N   DL  A+ ++ +M+  G+ P E TFA L+ A +    L  GRQIH  + K     D
Sbjct: 629 QN---DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYD 685

Query: 628 -PFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
             F+G+SL+ MY       DA ILF +    ++T+LW A++ G  Q+G  EE L+L+++M
Sbjct: 686 GDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEM 745

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
             +   PD  TF  VL ACS    + +     H +    G++ +    S +VD   + G 
Sbjct: 746 HRNNARPDQATFASVLRACSILASLGDG-RMIHSLIFHVGLDSDELTGSAVVDMYAKCGD 804

Query: 746 TKEAGELILSM 756
            K + ++   M
Sbjct: 805 MKSSVQVFEEM 815



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 182/577 (31%), Positives = 292/577 (50%), Gaps = 63/577 (10%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           S+T+H   LK G      +  A+V++Y+K G +  A   F+ +++RD++ W  +L  Y+ 
Sbjct: 100 SKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSR 159

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLG-----VISDLGKRHEEQVQAYAIKLLLYN 292
            G  E+V   F  L   G+ P+  +   VL      V  DLGK    QV    IK+    
Sbjct: 160 QGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGK----QVHCGVIKMGFEF 215

Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           N                            + + V W   ++GY+QVG    A++ F +M 
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 325 RSNVQYDSVTFLVALAAVAG----TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           +  +  D V F+  + A  G     D  +L  Q+  T         V+  N +I+ + K 
Sbjct: 276 KLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTN--------VVAWNVMISGHVKR 327

Query: 381 GC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           GC              G+++ + TL SVL A +SL E L+    +H  AIK    ++ +V
Sbjct: 328 GCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL-EALNYGLLVHAQAIKQGLNSNVYV 386

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            ++LI++Y +   M  A+ +F+  D  +L  WNAM+ GY  +  + K ++LFS M   G 
Sbjct: 387 GSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGF 446

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             DE T  + + AC CL  L+ G+Q+H++ +K  FE +L V + ++DMY KCGA+ +A+ 
Sbjct: 447 WPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQ 506

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
            F  I   D+V+W  +I G V   +ED A +++ +M L G+ PDE + A ++   + L A
Sbjct: 507 QFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQA 566

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LEQG Q+H  L+K    +  + G SL+DMY KCG IE A  +F  M  R+ V  NA++ G
Sbjct: 567 LEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAG 626

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            AQ+ +  E + LF++M+  G+ P  +TF  +L AC+
Sbjct: 627 YAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACT 662



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 241/498 (48%), Gaps = 16/498 (3%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +A K        +++ WN  LS Y + G     I CF ++    V  +  T+ + L++ A
Sbjct: 134 FAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCA 193

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR----------TDQFTL 393
              +++LG+Q+H   +K GF        SLI+MYSK G +   R          T  +T 
Sbjct: 194 RLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTA 253

Query: 394 ASVLRASSSLP-EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
                    LP E L + + +    +  D VA   V TA + +    G + +A  LF   
Sbjct: 254 MIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL----GRLDDACDLFVQM 309

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              ++  WN MI G++      +A++ F +M  +G +    T+ + + A   L  L  G 
Sbjct: 310 PNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGL 369

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +HA A+K G   ++ V S +++MY KC  M  A+ +F+ +   + V W  M+ G   NG
Sbjct: 370 LVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNG 429

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
                + ++ +MR  G  PDEFT+  ++ A +CL  LE GRQ+H+ +IK +   + FV  
Sbjct: 430 YASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVEN 489

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +LVDMYAKCG +E+A   F+ +  R+ V WNA++VG  Q  + +E   +F  M   G+ P
Sbjct: 490 TLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAP 549

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           D V+   +LS C+    + +  E  H    K G++  +   S L+D   + G  + A  +
Sbjct: 550 DEVSLASILSGCANLQALEQG-EQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYV 608

Query: 753 ILSMPFEASASMHRALLG 770
              MP  +  SM+  + G
Sbjct: 609 FSCMPSRSVVSMNAIIAG 626



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/605 (24%), Positives = 263/605 (43%), Gaps = 92/605 (15%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S+ S   S+L    S   L  G   HA+ +      + ++ ++L+ MY++C  +  A+++
Sbjct: 347 STRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKV 406

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           FD + +R+L+ WN++L  YA +G       ++  +LF  +R    +    T   +L  C 
Sbjct: 407 FDALDERNLVLWNAMLGGYAQNGYA-----SKVMKLFSEMRGCGFWPDEFTYTSILSACA 461

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
               +     +H + +K    ++ FV   LV++Y+K G + EA+  F+ ++ RD V W  
Sbjct: 462 CLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNA 521

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-- 287
           ++  Y +    +E F++F  +   G+ PD+ S+  +L   ++L    + EQV  + +K  
Sbjct: 522 IIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSG 581

Query: 288 --LLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFV 321
               LY  +S                        +VV  N  ++GY Q  D   AI+ F 
Sbjct: 582 LQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQ 640

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMY--- 377
            M    +    +TF   L A  G   LNLG+QIH    K G  Y    +G SL+ MY   
Sbjct: 641 EMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNS 700

Query: 378 -----------------------------SKMGCV------------CGLRTDQFTLASV 396
                                        ++ GC                R DQ T ASV
Sbjct: 701 QRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASV 760

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF- 455
           LRA S L   L   + IH         +D    +A++D+Y + G M  +  +FE      
Sbjct: 761 LRACSILAS-LGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKN 819

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM- 514
           D+ +WN+MI G+  +  +  AL++F  M  +  R D++T    + AC     + +G+++ 
Sbjct: 820 DVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIF 879

Query: 515 ----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
               H+Y +     LD C    ++D+  + G + +A+   + +   P+ + W T++  C 
Sbjct: 880 DIMVHSYKIVP--RLDHCAC--MIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACR 935

Query: 570 DNGEE 574
            +G++
Sbjct: 936 IHGDD 940



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 35/301 (11%)

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L +    SK IH   +K    +   + +A++D+Y + G++  A   F   +  D+  WN+
Sbjct: 93  LAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNS 152

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           ++  Y    +  + +  F  +   G   ++ T A  + +C  L+ +  GKQ+H   +K G
Sbjct: 153 VLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMG 212

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           FE +      ++DMY KCG++VDA+ IF+ +  PD V+WT MI+G V  G  + AL ++ 
Sbjct: 213 FEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFE 272

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            M+  G+VPD+  F  ++ A                           VG+         G
Sbjct: 273 DMQKLGLVPDQVAFVTVITAC--------------------------VGL---------G 297

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            ++DA  LF QM   N V WN M+ G  + G   E +  F++M   GV+    T   VLS
Sbjct: 298 RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLS 357

Query: 703 A 703
           A
Sbjct: 358 A 358



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 122/212 (57%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +  K +HA  +K GF     + S I+D+Y KCG +  A   FN +   D +AW +++S  
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
              G  +  +  +  ++  GV P++FT+AI++ + + L  ++ G+Q+H  +IK+    + 
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           F   SL+DMY+KCG++ DA  +F  +   +TV W AM+ G  Q G  EE LK+FEDM+  
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           G+ PD V F+ V++AC   G + +A + F  M
Sbjct: 278 GLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 271/905 (29%), Positives = 449/905 (49%), Gaps = 130/905 (14%)

Query: 139 NVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE- 194
           +V E F+    L   +    F+     + +L+LC S   +   + VH + +    +++  
Sbjct: 55  SVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSV 114

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+S  LV +Y K G + +A+ LFDGM  + +  W  M+ AY  NG       L+ ++  S
Sbjct: 115 FLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVS 174

Query: 255 GLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIK----LLLYNNNS------------ 295
           G+  D  +  C+L   G++ D  +R+  +V   AIK     +++  NS            
Sbjct: 175 GIPLDACTFPCILKACGLLKD--RRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 232

Query: 296 -------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        +VV WN  +S Y   G +  A+  F  M ++++  ++ TF+ AL A 
Sbjct: 233 GARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC 292

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
             +  +  G  IH T LKS +Y  V V N+LI MY++ G +                   
Sbjct: 293 EDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWN 352

Query: 384 ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G + D   + S++ AS+     LH   QIH +A+K
Sbjct: 353 SMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLH-GMQIHAYAMK 411

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           N   +D  V  +L+D+Y +  SM   + +F+     D+ +W  +I G+  + +  +ALEL
Sbjct: 412 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 471

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  +   G  LD + I++ + AC  L ++   K++H+Y ++ G   DL + +GI+D+Y +
Sbjct: 472 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGE 530

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +  A  +F  I   D V+WT+MIS  V NG  + AL ++H M+ +GV PD  +   +
Sbjct: 531 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 590

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A++ L+AL++G++IH  LI+     +  +  +LVDMYA+CG +E +  +F  +  ++ 
Sbjct: 591 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 650

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           VLW +M+     HG G   + LF  M+   + PD + F+ VL ACS++GL++E       
Sbjct: 651 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES 710

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M+ +Y +EP  EHY+ LVD LGRA   +EA + +  M  E +A +  ALLGAC++  + E
Sbjct: 711 MKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKE 770

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------- 831
            G+  A+KL+ ++P +   YVL+SN+++A  +W DV   R  MK   +KK+P        
Sbjct: 771 LGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVG 830

Query: 832 ---------------ADLIFAKVEGLIKRI-KEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                          +  I++K+  + +++ KEGGYV  T FVL + +EEEK + LY HS
Sbjct: 831 NKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHS 890

Query: 876 EKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGM 912
           E+LA AYG+++TP  + +   K                           ANRFHH + G+
Sbjct: 891 ERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGV 950

Query: 913 CPCAD 917
           C C D
Sbjct: 951 CSCGD 955


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/665 (35%), Positives = 346/665 (52%), Gaps = 91/665 (13%)

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           A T  L  G+Q+H   + +G+     + N L+NMYSK G                     
Sbjct: 16  AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75

Query: 382 -------------------C---VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                              C   +CG    QF  +S +RA +SL   + + KQ+H  A+K
Sbjct: 76  AMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS-IEMGKQMHCLALK 134

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               ++ FV + L D+Y + G+M +A  +FE     D  +W AMI GY       +AL  
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M      +D+  + + + ACG L   K G+ +H+  +K GFE D+ V + + DMY K
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254

Query: 540 CGAMVDAQSIFN-DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
            G M  A ++F  D    + V++T +I G V+  + +  LS++ ++R  G+ P+EFTF+ 
Sbjct: 255 AGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 314

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L+KA +   ALEQG Q+HA ++K++   DPFV   LVDMY KCG +E A   F ++    
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPT 374

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            + WN+++    QHG G++ +K+FE M   GV+P+++TFI +L+ CS+ GLV E  + F+
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M + YG+ P  EHYS ++D LGRAGR KEA E I  MPFE +A    + LGACR+ GD 
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 494

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           E GK  AEKL+ LEP +S A VLLSNI+A   QW+DV S R  M+  NVKK P       
Sbjct: 495 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 554

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                              I+ K++ L+ +IK  GYVP TD V LD+++  KE+ L+ HS
Sbjct: 555 GYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHS 614

Query: 876 EKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGM 912
           E++A A+ LIS P    I+  K                            +RFHH  DG 
Sbjct: 615 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 674

Query: 913 CPCAD 917
           C C D
Sbjct: 675 CSCGD 679



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D   LA V++  +     L   KQ+H   I       +F++  L+++Y + G +  A  L
Sbjct: 4   DTNALAHVIQTYAKTKR-LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     +L +W AMI G   ++   +A+  F  M   GE   +   ++A++AC  L  +
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + GKQMH  A+K G   +L V S + DMY KCGAM DA  +F ++P  D+V+WT MI G 
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
              GE + AL  + +M    V  D+      + A   L A + GR +H++++KL   SD 
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 629 FVGISLVDMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           FVG +L DMY+K G++E A  +F    + RN V +  ++ G  +    E+ L +F +++ 
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            G+EP+  TF  ++ AC+    + +  + +  +M+  +  +P V   S LVD  G+ G  
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLL 360

Query: 747 KEA 749
           ++A
Sbjct: 361 EQA 363



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 125/555 (22%), Positives = 222/555 (40%), Gaps = 104/555 (18%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++    T  L  GK  HA ++ +   P  FLTN+L+ MYS+CG L +A +LFD MP R+
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SW +++     SG       +E  R F  +R      ++   +  ++ C S G +   
Sbjct: 71  LVSWTAMI-----SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H  ALK G+  + FV   L ++YSK G + +A  +F+ M  +D V W  M+  Y++ 
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNN 293
           G  EE    F  +    +  D   +   LG    L     G+     V     +  ++  
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 294 NS-------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           N+                         NVV +   + GY++       +  FV + R  +
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           + +  TF   + A A    L  G Q+H   +K  F     V + L++MY K    CGL  
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK----CGL-- 359

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
               L   ++A   + +   ++                    +L+ V+ ++G   +A  +
Sbjct: 360 ----LEQAIQAFDEIGDPTEIA------------------WNSLVSVFGQHGLGKDAIKI 397

Query: 449 FENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATAVKACG 503
           FE      +   NA+ F  +L+  SH     + L+ F  M  +                 
Sbjct: 398 FERMVDRGVKP-NAITFISLLTGCSHAGLVEEGLDYFYSMDKT----------------- 439

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
                        Y +  G E   CV    +D+  + G + +A+   N +P  P+   W 
Sbjct: 440 -------------YGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482

Query: 563 TMISGCVDNGEEDLA 577
           + +  C  +G++++ 
Sbjct: 483 SFLGACRIHGDKEMG 497



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 166/404 (41%), Gaps = 58/404 (14%)

Query: 15  HTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILR 61
           H   +F +  +   RNL S++  +    Q S FS +              +   + S +R
Sbjct: 58  HALKLFDTMPQ---RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIR 114

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
              S   + +GK  H   L      + F+ +NL  MYS+CG++  A ++F++MP +D +S
Sbjct: 115 ACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS 174

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           W +++  Y+  GE       E    F+ + +      +  L   L  C +        +V
Sbjct: 175 WTAMIDGYSKIGE-----FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSV 229

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGF 240
           H   +K+G   D FV  AL ++YSK G +  A  +F    E R+VV +  ++  Y E   
Sbjct: 230 HSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ 289

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKL----------- 288
            E+   +FV+L R G+ P++ +   ++   ++     +  Q+ A  +K+           
Sbjct: 290 IEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI 349

Query: 289 ---------LLYN--------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                    LL           +   + WN  +S + Q G    AI+ F  M+   V+ +
Sbjct: 350 LVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPN 409

Query: 332 SVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           ++TF+  L   +       G D      + +G       YS VI
Sbjct: 410 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 24/255 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++   + + L  G   HA+++  +   D F+++ L+ MY +CG L  A + FD++ D 
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 373

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             I+WNS+++ +   G G      +  ++F  + +     + +T   LL  C  +G V  
Sbjct: 374 TEIAWNSLVSVFGQHGLGK-----DAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEE 428

Query: 178 S-ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML--- 232
             +  +      G+V  E     ++++  + G+++EAK   + M  E +   W   L   
Sbjct: 429 GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 488

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
           R + +   G+      V L      P +     +L  I    +R  E V++  +++    
Sbjct: 489 RIHGDKEMGKLAAEKLVKLE-----PKNSGALVLLSNIY-ANERQWEDVRSVRMRM---- 538

Query: 293 NNSNVVLWNKKLSGY 307
            + NV    KKL GY
Sbjct: 539 RDGNV----KKLPGY 549


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 283/931 (30%), Positives = 442/931 (47%), Gaps = 169/931 (18%)

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           R G +  AR +FD MP RD+I+WNS+++AY H+G  +A          R L ++I+    
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAA---------RDLYDAIS---- 92

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
                                  G  ++ G +        L++ Y + G++ EA+ +FDG
Sbjct: 93  -----------------------GGNMRTGAI--------LLSGYGRLGRVLEARRVFDG 121

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           M ER+ V W  M+  Y +NG       LF  +       D  S   +L      G  H  
Sbjct: 122 MLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSML-----TGYCHSL 172

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG-AIECFVNMIRSNVQYDSVTFLVA 338
           Q+   A  L       N+V W   +SGY ++ +NHG A + F  M R  +  D   F  A
Sbjct: 173 QM-VDARNLFEKMPERNLVSWTVMISGYGRI-ENHGKAWDIFCKMHREGLLPDQSNFASA 230

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG---------LRTD 389
           L+AV G  NL++ + +    LK+GF   V++G +++N+YS+   V           +  +
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290

Query: 390 QFTLASVLRASS------------------------SLPEGLHLSKQIHVHAIKNDTVAD 425
           ++T ++++ A S                        +L  GL    +I    I  + + +
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPE 350

Query: 426 SFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
             V +  ALI  Y +NG + EA+ LF+     +  +W  MI GY  +  S +AL L   +
Sbjct: 351 PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC--- 540
           H SG      ++ +   AC  ++ L+ G Q+H+ A+K G + +    + ++ MY KC   
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNM 470

Query: 541 ----------------------GAMV------DAQSIFNDIPAPDDVAWTTMISGCVDNG 572
                                  A+V      +A++ F+++ + DDV+WTT+IS      
Sbjct: 471 EYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAE 530

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           + + A+  +  M     +P+     IL+     L A + G+QIH   IKL   S+  V  
Sbjct: 531 QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVAN 590

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +L+ MY KCG   D+  +F  M+ R+   WN ++ G AQHG G E +K+++ M++ GV P
Sbjct: 591 ALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLP 649

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           + VTF+G+L+ACS+ GLV E ++ F  M + YG+ P  EHY+ +VD LGR G  + A + 
Sbjct: 650 NEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQF 709

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I  MP E    +  ALLGAC++  + E GK  AEKL  +EP ++  YV+LSNI+++   W
Sbjct: 710 IYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMW 769

Query: 813 DDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEG 849
            +V   R  MK++ V K+P                        + I A +E L   +K  
Sbjct: 770 GEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKAT 829

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------------------- 889
           GYVPDT+FVL D++EE+KE +L YHSEKLA AY L++TP                     
Sbjct: 830 GYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFI 889

Query: 890 ---SSVILSNKEPLYANRFHHLRDGMCPCAD 917
              S V     +    NRFHH R+G C C D
Sbjct: 890 KFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 174/715 (24%), Positives = 315/715 (44%), Gaps = 83/715 (11%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNN------LMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           LL G     R+L + ++ D  L  N      +++ Y + G +  ARRLFD MP RD+ SW
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161

Query: 123 NSILAAYAH--------------------------SGEGNAENVTEGFRLFRSLRESITF 156
           NS+L  Y H                          SG G  EN  + + +F  +      
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF- 215
             +   A  L      G +   E++   ALK G   D  +  A++N+YS+   + +    
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-- 273
            F+ M ER+   W  M+ A +  G  +    ++    R  +    +S+ C   +I+ L  
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPV----KSIACRTALITGLAQ 334

Query: 274 -GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYD 331
            G+  + ++    I   +      VV WN  ++GY+Q G  + A E F  M  R+ + + 
Sbjct: 335 CGRIDDARILFEQIPEPI------VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWA 388

Query: 332 SVTFLVALAAVAGTDNLNLG--QQIHG-------TTLKSGFYS-----AVIVGNSLINMY 377
               ++A  A  G     LG  Q++H        ++L S F++     A+  G  + ++ 
Sbjct: 389 G---MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
            K+GC    + + F   +++         +  ++Q+    +  D V+ +    AL+    
Sbjct: 446 VKVGC----QFNSFACNALITMYGKC-RNMEYARQVFSRMVTKDIVSWNSFLAALV---- 496

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           +N  + EA   F+N    D  +W  +I  Y  +  S++A+  F  M    E  +   +  
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +  CG L   K G+Q+H  A+K G + +L V++ ++ MY KCG   D++ IF+ +   D
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERD 615

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
              W T+I+G   +G    A+ +Y  M  +GV+P+E TF  L+ A S    +++G +   
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 618 NLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNG 675
           ++ +    +  P     +VD+  + G+++ A      M +  +TV+W+A+L     H N 
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735

Query: 676 EETLKLFEDMKAHGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREKYGI-EP 728
           E   +  E  K   +EP +   ++ + +  S  G+  E  E   +M+++  I EP
Sbjct: 736 EIGKRAAE--KLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEP 788



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 50/381 (13%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L LL  L +S    S SS    SI     +   L  G   H+  +      + F  N L
Sbjct: 403 ALGLLQELHRSGMLPSLSSLT--SIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNAL 460

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH----------------------- 131
           +TMY +C ++ YAR++F +M  +D++SWNS LAA                          
Sbjct: 461 ITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWT 520

Query: 132 ---SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              S   +AE   E    F+++       +   L  LL +C S G     + +H  A+K+
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKL 580

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+  +  V+ AL+++Y K G   +++ +FD M+ERD+  W  ++  YA++G G E   ++
Sbjct: 581 GMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMY 639

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQAYAIKLLLYNNNSNVVLWNK 302
             +  +G+ P++ +   +L   S  G      K  +   Q Y +  L  +    V L  +
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
                   GD  GA +   +M    ++ D+V +   L A     N  +G++      +  
Sbjct: 700 -------TGDVQGAEQFIYDM---PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIE 749

Query: 363 FYSAVIVGNSLI--NMYSKMG 381
             +A   GN ++  N+YS +G
Sbjct: 750 PSNA---GNYVMLSNIYSSLG 767


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/665 (35%), Positives = 345/665 (51%), Gaps = 91/665 (13%)

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           A T  L  G+Q+H   + +G+     + N L+NMYSK G                     
Sbjct: 16  AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75

Query: 382 -------------------C---VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                              C   +CG    QF  +S +RA +SL   + + KQ+H  A+K
Sbjct: 76  AMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS-IEMGKQMHCLALK 134

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               ++ FV + L D+Y + G+M +A  +FE     D  +W AMI GY       +AL  
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M      +D+  + + + ACG L   K G+ +H+  +K GFE D+ V + + DMY K
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254

Query: 540 CGAMVDAQSIFN-DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
            G M  A ++F  D    + V++T +I G V+  + +  LS++ ++R  G+ P+EFTF+ 
Sbjct: 255 AGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 314

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L+KA +   ALEQG Q+HA ++K++   DPFV   LVDMY KCG +E A   F ++    
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPT 374

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            + WN+++    QHG G++ +K FE M   GV+P+++TFI +L+ CS+ GLV E  + F+
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M + YG+ P  EHYS ++D LGRAGR KEA E I  MPFE +A    + LGACR+ GD 
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 494

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           E GK  AEKL+ LEP +S A VLLSNI+A   QW+DV S R  M+  NVKK P       
Sbjct: 495 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 554

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                              I+ K++ L+ +IK  GYVP TD V LD+++  KE+ L+ HS
Sbjct: 555 GYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHS 614

Query: 876 EKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGM 912
           E++A A+ LIS P    I+  K                            +RFHH  DG 
Sbjct: 615 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 674

Query: 913 CPCAD 917
           C C D
Sbjct: 675 CSCGD 679



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 189/363 (52%), Gaps = 5/363 (1%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D   LA V++  +     L   KQ+H   I       +F++  L+++Y + G +  A  L
Sbjct: 4   DTNALAHVIQTYAKTKR-LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     +L +W AMI G   ++   +A+  F  M   GE   +   ++A++AC  L  +
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + GKQMH  A+K G   +L V S + DMY KCGAM DA  +F ++P  D+V+WT MI G 
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
              GE + AL  + +M    V  D+      + A   L A + GR +H++++KL   SD 
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 629 FVGISLVDMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           FVG +L DMY+K G++E A  +F    + RN V +  ++ G  +    E+ L +F +++ 
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            G+EP+  TF  ++ AC+    + +  + +  +M+  +  +P V   S LVD  G+ G  
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLL 360

Query: 747 KEA 749
           + A
Sbjct: 361 EHA 363



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 128/558 (22%), Positives = 220/558 (39%), Gaps = 110/558 (19%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++    T  L  GK  HA ++ +   P  FLTN+L+ MYS+CG L +A +LFD MP R+
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SW +++     SG       +E  R F  +R      ++   +  ++ C S G +   
Sbjct: 71  LVSWTAMI-----SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H  ALK G+  + FV   L ++YSK G + +A  +F+ M  +D V W  M+  Y++ 
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNN 293
           G  EE    F  +    +  D   +   LG    L     G+     V     +  ++  
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 294 NS-------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           N+                         NVV +   + GY++       +  FV + R  +
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           + +  TF   + A A    L  G Q+H   +K  F     V + L++MY K    CGL  
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK----CGLLE 361

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKN-DTVAD--SFVSTALIDVYCRNGSMAEA 445
                                      HAI+  D + D       +L+ V+ ++G   +A
Sbjct: 362 ---------------------------HAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATAVK 500
              FE      +   NA+ F  +L+  SH     + L+ F  M  +              
Sbjct: 395 IKFFERMVDRGVKP-NAITFISLLTGCSHAGLVEEGLDYFYSMDKT-------------- 439

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
                           Y +  G E   CV    +D+  + G + +A+   N +P  P+  
Sbjct: 440 ----------------YGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMPFEPNAF 479

Query: 560 AWTTMISGCVDNGEEDLA 577
            W + +  C  +G++++ 
Sbjct: 480 GWCSFLGACRIHGDKEMG 497



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 165/404 (40%), Gaps = 58/404 (14%)

Query: 15  HTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILR 61
           H   +F +  +   RNL S++  +    Q S FS +              +   + S +R
Sbjct: 58  HALKLFDTMPQ---RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIR 114

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
              S   + +GK  H   L      + F+ +NL  MYS+CG++  A ++F++MP +D +S
Sbjct: 115 ACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS 174

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           W +++  Y+  GE       E    F+ + +      +  L   L  C +        +V
Sbjct: 175 WTAMIDGYSKIGE-----FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSV 229

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGF 240
           H   +K+G   D FV  AL ++YSK G +  A  +F    E R+VV +  ++  Y E   
Sbjct: 230 HSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ 289

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQA------------ 283
            E+   +FV+L R G+ P++ +   ++   +     + G +   QV              
Sbjct: 290 IEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI 349

Query: 284 ------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                       +AI+      +   + WN  +S + Q G    AI+ F  M+   V+ +
Sbjct: 350 LVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPN 409

Query: 332 SVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           ++TF+  L   +       G D      + +G       YS VI
Sbjct: 410 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 24/255 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++   + + L  G   HA+++  +   D F+++ L+ MY +CG L +A + FD++ D 
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDP 373

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             I+WNS+++ +   G G      +  + F  + +     + +T   LL  C  +G V  
Sbjct: 374 TEIAWNSLVSVFGQHGLGK-----DAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEE 428

Query: 178 S-ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML--- 232
             +  +      G+V  E     ++++  + G+++EAK   + M  E +   W   L   
Sbjct: 429 GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 488

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
           R + +   G+      V L      P +     +L  I    +R  E V++  +++    
Sbjct: 489 RIHGDKEMGKLAAEKLVKLE-----PKNSGALVLLSNIY-ANERQWEDVRSVRMRM---- 538

Query: 293 NNSNVVLWNKKLSGY 307
            + NV    KKL GY
Sbjct: 539 RDGNV----KKLPGY 549


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 283/931 (30%), Positives = 442/931 (47%), Gaps = 169/931 (18%)

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           R G +  AR +FD MP RD+I+WNS+++AY H+G  +A          R L ++I+    
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAA---------RDLYDAIS---- 92

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
                                  G  ++ G +        L++ Y + G++ EA+ +FDG
Sbjct: 93  -----------------------GGNMRTGAI--------LLSGYGRLGRVLEARRVFDG 121

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           M ER+ V W  M+  Y +NG       LF  +       D  S   +L      G  H  
Sbjct: 122 MLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSML-----TGYCHSL 172

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG-AIECFVNMIRSNVQYDSVTFLVA 338
           Q+   A  L       N+V W   +SGY ++ +NHG A + F  M R  +  D   F  A
Sbjct: 173 QM-VDARNLFEKMPERNLVSWTVMISGYGRI-ENHGKAWDIFCKMHREGLLPDQSNFASA 230

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG---------LRTD 389
           L+AV G  NL++ + +    LK+GF   V++G +++N+YS+   V           +  +
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290

Query: 390 QFTLASVLRASS------------------------SLPEGLHLSKQIHVHAIKNDTVAD 425
           ++T ++++ A S                        +L  GL    +I    I  + + +
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPE 350

Query: 426 SFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
             V +  ALI  Y +NG + EA+ LF+     +  +W  MI GY  +  S +AL L   +
Sbjct: 351 PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC--- 540
           H SG      ++ +   AC  ++ L+ G Q+H+ A+K G + +    + ++ MY KC   
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNM 470

Query: 541 ----------------------GAMV------DAQSIFNDIPAPDDVAWTTMISGCVDNG 572
                                  A+V      +A++ F+++ + DDV+WTT+IS      
Sbjct: 471 EYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAE 530

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           + + A+  +  M     +P+     IL+     L A + G+QIH   IKL   S+  V  
Sbjct: 531 QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVAN 590

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +L+ MY KCG   D+  +F  M+ R+   WN ++ G AQHG G E +K+++ M++ GV P
Sbjct: 591 ALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLP 649

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           + VTF+G+L+ACS+ GLV E ++ F  M + YG+ P  EHY+ +VD LGR G  + A + 
Sbjct: 650 NEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQF 709

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I  MP E    +  ALLGAC++  + E GK  AEKL  +EP ++  YV+LSNI+++   W
Sbjct: 710 IYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMW 769

Query: 813 DDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEG 849
            +V   R  MK++ V K+P                        + I A +E L   +K  
Sbjct: 770 GEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKAT 829

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------------------- 889
           GYVPDT+FVL D++EE+KE +L YHSEKLA AY L++TP                     
Sbjct: 830 GYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFI 889

Query: 890 ---SSVILSNKEPLYANRFHHLRDGMCPCAD 917
              S V     +    NRFHH R+G C C D
Sbjct: 890 KFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 174/715 (24%), Positives = 315/715 (44%), Gaps = 83/715 (11%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNN------LMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           LL G     R+L + ++ D  L  N      +++ Y + G +  ARRLFD MP RD+ SW
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161

Query: 123 NSILAAYAH--------------------------SGEGNAENVTEGFRLFRSLRESITF 156
           NS+L  Y H                          SG G  EN  + + +F  +      
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF- 215
             +   A  L      G +   E++   ALK G   D  +  A++N+YS+   + +    
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-- 273
            F+ M ER+   W  M+ A +  G  +    ++    R  +    +S+ C   +I+ L  
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPV----KSIACRTALITGLAQ 334

Query: 274 -GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYD 331
            G+  + ++    I   +      VV WN  ++GY+Q G  + A E F  M  R+ + + 
Sbjct: 335 CGRIDDARILFEQIPEPI------VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWA 388

Query: 332 SVTFLVALAAVAGTDNLNLG--QQIHG-------TTLKSGFYS-----AVIVGNSLINMY 377
               ++A  A  G     LG  Q++H        ++L S F++     A+  G  + ++ 
Sbjct: 389 G---MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
            K+GC    + + F   +++         +  ++Q+    +  D V+ +    AL+    
Sbjct: 446 VKVGC----QFNSFACNALITMYGKC-RNMEYARQVFSRMVTKDIVSWNSFLAALV---- 496

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           +N  + EA   F+N    D  +W  +I  Y  +  S++A+  F  M    E  +   +  
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +  CG L   K G+Q+H  A+K G + +L V++ ++ MY KCG   D++ IF+ +   D
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERD 615

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
              W T+I+G   +G    A+ +Y  M  +GV+P+E TF  L+ A S    +++G +   
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 618 NLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNG 675
           ++ +    +  P     +VD+  + G+++ A      M +  +TV+W+A+L     H N 
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735

Query: 676 EETLKLFEDMKAHGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREKYGI-EP 728
           E   +  E  K   +EP +   ++ + +  S  G+  E  E   +M+++  I EP
Sbjct: 736 EIGKRAAE--KLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEP 788



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 50/381 (13%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L LL  L +S    S SS    SI     +   L  G   H+  +      + F  N L
Sbjct: 403 ALGLLQELHRSGMLPSLSSLT--SIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNAL 460

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH----------------------- 131
           +TMY +C ++ YAR++F +M  +D++SWNS LAA                          
Sbjct: 461 ITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWT 520

Query: 132 ---SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              S   +AE   E    F+++       +   L  LL +C S G     + +H  A+K+
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKL 580

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+  +  V+ AL+++Y K G   +++ +FD M+ERD+  W  ++  YA++G G E   ++
Sbjct: 581 GMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMY 639

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQAYAIKLLLYNNNSNVVLWNK 302
             +  +G+ P++ +   +L   S  G      K  +   Q Y +  L  +    V L  +
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
                   GD  GA +   +M    ++ D+V +   L A     N  +G++      +  
Sbjct: 700 -------TGDVQGAEQFIYDM---PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIE 749

Query: 363 FYSAVIVGNSLI--NMYSKMG 381
             +A   GN ++  N+YS +G
Sbjct: 750 PSNA---GNYVMLSNIYSSLG 767


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 268/877 (30%), Positives = 421/877 (48%), Gaps = 127/877 (14%)

Query: 39  LPFLQKSHFSSSSSSSQW-----FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTN 92
            P L   +F    +S  W     F+I+  + +  +++  G+  H  ++        +   
Sbjct: 140 FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEG 199

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
            L+ MY++C  L  AR +FD   + D +SW S++  Y   G        E  ++F+ +  
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPE-----EAVKVFQEME- 253

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                                             K+G   D+     ++N Y   G++  
Sbjct: 254 ----------------------------------KVGQEPDQVAFVTVINAYVDLGRLDN 279

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A  LF  M  R+VV W +M+  +A+ G+G E    F ++ ++G+     ++  VL  I+ 
Sbjct: 280 ASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339

Query: 273 LGKR------HEEQVQA-----------------------YAIKLLLYNNNSNVVLWNKK 303
           L         H E ++                         A K+    N  NVVLWN  
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAM 399

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           L GY+Q G  +  +E F NM       D  T+   L+A A    L+LG Q+H   +K+ F
Sbjct: 400 LGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKF 459

Query: 364 YSAVIVGNSLINMYSKMGCV---------------------------------------- 383
            S + VGN+L++MY+K G +                                        
Sbjct: 460 ASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRR 519

Query: 384 ---CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G+  D+ +LAS+L A +S+  GL   KQ+H  ++K       +  ++LID+Y + G
Sbjct: 520 MNLLGILPDEVSLASILSACASV-RGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCG 578

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           ++  A  +        + + NA+I GY    N  +A+ LF  M   G    EIT A+ + 
Sbjct: 579 AIDSAHKILACMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLVEGINSTEITFASLLD 637

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELD---LCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           AC     L  G+Q+H+  +K G +LD   L VS  +L MY+      DA  +F++   P 
Sbjct: 638 ACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVS--LLGMYMNSLRTTDASVLFSEFSNPK 695

Query: 558 D-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
             V WT MISG   N    +AL +Y +MR   V+PD+ TF   ++A + +++++ G + H
Sbjct: 696 SAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETH 755

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAMLVGLAQHGNG 675
           + +      SD     +LVDMYAKCG+++ +  +FK+M  +  V+ WN+M+VG A++G  
Sbjct: 756 SLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYA 815

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           E+ L++F++MK   V PD VTF+GVL+ACS++G VSE    F +M   YG++P  +H + 
Sbjct: 816 EDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCAC 875

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD LGR G  KEA E I  + FE  A +   +LGACR+ GD   G+  AEKL+ LEP +
Sbjct: 876 MVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQN 935

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           SS YVLLSNI+AA+  WD+V + R EM+ K VKK P 
Sbjct: 936 SSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPG 972



 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 221/729 (30%), Positives = 354/729 (48%), Gaps = 59/729 (8%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA+ L         L N ++ +Y++C  + YA R F ++ D+D+++WNSIL+   HS
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSM--HS 136

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            +G    V + F L   L  S  + +  T A +L  C     V     VH   +K+G   
Sbjct: 137 KQGFPHLVVKYFGL---LWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFES 193

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             +  GAL+ +Y+K   + +A+ +FDG  E D V W  M+  Y + G  EE   +F ++ 
Sbjct: 194 ISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEME 253

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           + G  PD  +   V+    DLG+         A  L     N NVV WN  +SG+ + G 
Sbjct: 254 KVGQEPDQVAFVTVINAYVDLGRLDN------ASDLFSRMPNRNVVAWNLMISGHAKGGY 307

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              AIE F NM ++ ++    T    L+A+A    L+ G  +H   LK G +S V VG+S
Sbjct: 308 GVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSS 367

Query: 373 LINMYSKMGCV-------------------------------------------CGLRTD 389
           L++MY+K G +                                           CG   D
Sbjct: 368 LVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPD 427

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
            FT +S+L A + L + L L  Q+H   IKN   ++ FV  AL+D+Y ++G++ +A   F
Sbjct: 428 DFTYSSILSACACL-KYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF 486

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E     D  +WN +I GY+   +  +A  LF  M+  G   DE+++A+ + AC  +  L+
Sbjct: 487 ELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLE 546

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           QGKQ+H  ++K+G E  L   S ++DMY KCGA+  A  I   +P    V+   +I+G  
Sbjct: 547 QGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYA 606

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS-SDP 628
               E  A++++  M + G+   E TFA L+ A      L  GRQIH+ ++K+     D 
Sbjct: 607 QINLEQ-AVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDE 665

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           F+G+SL+ MY       DA +LF +  + ++ V+W AM+ GL+Q+      L+L+++M++
Sbjct: 666 FLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRS 725

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             V PD  TF+  L AC+    + +  E   L+    G + +    S LVD   + G  K
Sbjct: 726 CNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHT-GFDSDELTSSALVDMYAKCGDVK 784

Query: 748 EAGELILSM 756
            + ++   M
Sbjct: 785 SSMQVFKEM 793



 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 293/576 (50%), Gaps = 51/576 (8%)

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           S +   ++ +H  +LK+G  W + V G  +V++Y+K   +  A+  F  ++++D++ W  
Sbjct: 72  SQFSTTNKIIHAQSLKLGF-WSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNS 130

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDD-------------ESVQCVLGVISDLGKRH 277
           +L  +++ GF   V   F  L  SG+ P++             E V+C   V  ++ K  
Sbjct: 131 ILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMG 190

Query: 278 EEQVQ--------AYAIKLLLYNNNS--------NVVLWNKKLSGYLQVGDNHGAIECFV 321
            E +          YA    L +  S        + V W   + GY++VG    A++ F 
Sbjct: 191 FESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQ 250

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSKM 380
            M +   + D V F+  + A      ++LG+  + + L S   +  V+  N +I+ ++K 
Sbjct: 251 EMEKVGQEPDQVAFVTVINAY-----VDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKG 305

Query: 381 GC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           G               G+++ + TL SVL A +SL   L     +H  A+K    ++ +V
Sbjct: 306 GYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLA-ALDFGLLVHAEALKQGLHSNVYV 364

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            ++L+ +Y + G M  A+ +F+  +  ++  WNAM+ GY+ +  +++ +ELF +M + G 
Sbjct: 365 GSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGF 424

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D+ T ++ + AC CL  L  G Q+H+  +K+ F  +L V + ++DMY K GA+ DA+ 
Sbjct: 425 YPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQ 484

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
            F  I   D+V+W  +I G V   +E  A  ++ +M L G++PDE + A ++ A + +  
Sbjct: 485 QFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRG 544

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LEQG+Q+H   +K    +  + G SL+DMYAKCG I+ A+ +   M  R+ V  NA++ G
Sbjct: 545 LEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAG 604

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            AQ  N E+ + LF DM   G+    +TF  +L AC
Sbjct: 605 YAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDAC 639



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 251/503 (49%), Gaps = 18/503 (3%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA +      + +++ WN  LS + + G  H  ++ F  +  S V  +  TF + L++ A
Sbjct: 112 YAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCA 171

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--------DQFTLAS 395
             + +  G+Q+H   +K GF S      +LI MY+K   +   R+        D+ +  S
Sbjct: 172 RLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTS 231

Query: 396 VLRA--SSSLPE-GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           ++       LPE  + + +++     + D VA  FV+  +I+ Y   G +  A  LF   
Sbjct: 232 MIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVA--FVT--VINAYVDLGRLDNASDLFSRM 287

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              ++  WN MI G+       +A+E F +M  +G +    T+ + + A   L  L  G 
Sbjct: 288 PNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGL 347

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +HA A+K G   ++ V S ++ MY KCG M  A+ +F+ +   + V W  M+ G V NG
Sbjct: 348 LVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNG 407

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
             +  + ++  M+  G  PD+FT++ ++ A +CL  L+ G Q+H+ +IK   +S+ FVG 
Sbjct: 408 YANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGN 467

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +LVDMYAK G +EDA   F+ +  R+ V WN ++VG  Q  +  E   LF  M   G+ P
Sbjct: 468 ALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILP 527

Query: 693 DSVTFIGVLSAC-SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           D V+   +LSAC S  GL  E  +  H +  K G E ++   S L+D   + G    A +
Sbjct: 528 DEVSLASILSACASVRGL--EQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHK 585

Query: 752 LILSMPFEASASMHRALLGACRV 774
           ++  MP  +  SM+  + G  ++
Sbjct: 586 ILACMPERSVVSMNALIAGYAQI 608



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 165/366 (45%), Gaps = 45/366 (12%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K IH  ++K    +   +   ++D+Y +   +  AE  F+  +  D+  WN+++  +  
Sbjct: 78  NKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSK 137

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
               H  ++ F  +  SG   +E T A  + +C  L M+K G+Q+H   +K GFE     
Sbjct: 138 QGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYC 197

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
              ++ MY KC  + DA+SIF+     D V+WT+MI G +  G  + A+ ++ +M   G 
Sbjct: 198 EGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ 257

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            PD+  F                                   +++++ Y   G +++A  
Sbjct: 258 EPDQVAF-----------------------------------VTVINAYVDLGRLDNASD 282

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           LF +M  RN V WN M+ G A+ G G E ++ F++M+  G++    T   VLSA     +
Sbjct: 283 LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSA-----I 337

Query: 710 VSEAYENFHLMRE----KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
            S A  +F L+      K G+   V   S LV    + G+  EA + +     E +  + 
Sbjct: 338 ASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKM-EAAKKVFDTLNEQNVVLW 396

Query: 766 RALLGA 771
            A+LG 
Sbjct: 397 NAMLGG 402


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 256/795 (32%), Positives = 392/795 (49%), Gaps = 105/795 (13%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVS-GALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           CL   Y+  S+    + +  G+   + VS  A++  Y+  G I  A+ LFD M ERDVV 
Sbjct: 82  CLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVS 141

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY--- 284
           W  ++  Y  NG   +V  +F+ + R G   D  +   VL   S L + H   +Q +   
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSL-EDHGGGIQIHGLA 200

Query: 285 ---------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
                                      +I+        N V W+  ++G +Q  D  G +
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           E F  M ++ V     TF     + AG   L LG Q+HG  LK+ F + V++G + ++MY
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMY 320

Query: 378 SKMGCVC-------------------------------------------GLRTDQFTLA 394
            K   +                                            GL  D+ +L+
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS 380

Query: 395 SVLRASSSLP---EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
              RA + +    EGL    Q+H  ++K+   ++  V+ A++D+Y + G++ EA  +FE 
Sbjct: 381 GAFRACAVIKGDLEGL----QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 436

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  +WNA+I  +  + N  K L LF  M  SG   DE T  + +KAC     L  G
Sbjct: 437 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 496

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
            ++H   +KS   LD  V   ++DMY KCG M  A+ + + +     V+W  +ISG    
Sbjct: 497 MEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 556

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
            + + A   + +M   GV PD FT+A ++   + L  +E G+QIHA +IK +  SD ++ 
Sbjct: 557 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS 616

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +LVDMY+KCGN++D  ++F++   R+ V WNAM+ G AQHG GEE LK+FE M+   V+
Sbjct: 617 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 676

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+  TF+ VL AC + GLV +    FH M   YG++P++EHYS +VD +GR+G+  +A E
Sbjct: 677 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 736

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           LI  MPFEA A + R LL  C++ G+ E  +  A  ++ LEP DS+AYVLLSNI+A A  
Sbjct: 737 LIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGM 796

Query: 812 WDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKE 848
           W++VT  R  M+   +KK+P                       +  I+  ++ L   +K 
Sbjct: 797 WNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKW 856

Query: 849 GGYVPDTDFVLLDVE 863
            GY+PDTDF+L D E
Sbjct: 857 VGYMPDTDFILNDDE 871



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 222/844 (26%), Positives = 368/844 (43%), Gaps = 136/844 (16%)

Query: 12  RHKHTYVIFSSF-TKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS-ILRHAISTSDL 69
           RH      F +F +K  ++ LP     + PF   S + ++ +  + FS I +       L
Sbjct: 7   RHLFPIRFFFNFQSKSPFKTLP-----ISPF---SSYQATPTKKKTFSHIFQECSDRKAL 58

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA---------------------- 107
             GK  HAR++ +   P  F+TN L+ MY +C  L +A                      
Sbjct: 59  CPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGY 118

Query: 108 ---------RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS 158
                    ++LFD MP+RD++SWNS+++ Y H+G+       +   +F  +    T   
Sbjct: 119 AGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHR-----KVIDVFLQMGRMGTVFD 173

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R T A +LK C S         +HG A+K+G   D     AL+++Y+K  K+  +   F 
Sbjct: 174 RTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFH 233

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RH 277
            M E++ V W  ++    +N        LF ++ ++G+     +   V    + L   R 
Sbjct: 234 SMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRL 293

Query: 278 EEQVQAYAIK-------------LLLY---NN------------NSNVVLWNKKLSGYLQ 309
             Q+  +A+K             L +Y   NN            N N+  +N  + GY +
Sbjct: 294 GSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR 353

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 A+  F  + +S +  D V+   A  A A       G Q+HG ++KS   S + V
Sbjct: 354 SDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 413

Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
            N++++MY K G +                                            G+
Sbjct: 414 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 473

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             D+FT  SVL+A +   + L+   +IH   IK+    DSFV  ALID+Y + G M +AE
Sbjct: 474 EPDEFTYGSVLKACAGW-QALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 532

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            L +      + +WNA+I G+ L   S +A + FS M   G   D  T AT +  C  L+
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++ GKQ+HA  +K   + D  +SS ++DMY KCG M D Q IF   P  D V W  M+ 
Sbjct: 593 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 652

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LD 623
           G   +G  + AL I+  M+L  V P+  TF  +++A   +  +E+G     +++    LD
Sbjct: 653 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 712

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLF 682
              + +  +  VD+  + G +  A  L + M    + V+W  +L     HGN E   K  
Sbjct: 713 PQLEHYSCV--VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAA 770

Query: 683 EDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYE-----NFHLMREKYG---IEPEVEHY 733
             +    +EP DS  ++ + +  +  G+ +E  +      F+ ++++ G   IE + E +
Sbjct: 771 YSILQ--LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVH 828

Query: 734 SFLV 737
           +FLV
Sbjct: 829 AFLV 832



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 201/429 (46%), Gaps = 30/429 (6%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           G+Q H   + + F   V V N LI MY K             L    +    +P+     
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKCS----------DLEFAFKVFDGMPQ----- 105

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
                     DTV+      A++  Y   G +  A+ LF+     D+ +WN++I GY+ +
Sbjct: 106 ---------RDTVS----WNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHN 152

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  K +++F  M   G   D  T A  +K+C  L     G Q+H  A+K GF+ D+   
Sbjct: 153 GDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTG 212

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY KC  +  +   F+ +P  + V+W+ +I+GCV N +    L ++ +M+ +GV 
Sbjct: 213 SALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVG 272

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
             + TFA + ++ + L+AL  G Q+H + +K D  +D  +G + +DMY KC N+ DA  L
Sbjct: 273 VSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKL 332

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  +   N   +NA++VG A+   G E L +F  ++  G+  D V+  G   AC+     
Sbjct: 333 FNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGD 392

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  +  H +  K   +  +   + ++D  G+ G   EA  L+        A    A++ 
Sbjct: 393 LEGLQ-VHGLSMKSLCQSNICVANAILDMYGKCGALVEAC-LVFEEMVSRDAVSWNAIIA 450

Query: 771 ACRVQGDTE 779
           A    G+ E
Sbjct: 451 AHEQNGNEE 459


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 276/942 (29%), Positives = 448/942 (47%), Gaps = 131/942 (13%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MYS+ GS+ +A+ +FDKMP+R+  SWN++++ +   G        +  + F  + E    
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGW-----YQKAMQFFCHMLEHGVR 55

Query: 157 TSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
            S    A L+  C  SG +   +  VH + +K GL  D FV  +L++ Y  FG + E   
Sbjct: 56  PSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDM 115

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISD 272
           +F  ++E ++V W  ++  YA NG  +EV  ++  L R G+  ++ ++  V+   GV+ D
Sbjct: 116 VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVD 175

Query: 273 LGKRHEEQVQAYAIK-------------LLLYNNNSNV---------------VLWNKKL 304
             K    QV    IK             + ++ N  ++               + WN  +
Sbjct: 176 --KMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSII 233

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +  +  G    ++E F  M  ++ + D +T    L       NL  G+ +HG  +KSG  
Sbjct: 234 TASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLE 293

Query: 365 SAVIVGNSLINMYSKMG---------------------------------------CVCG 385
           S V V NSL++MYS+ G                                        +  
Sbjct: 294 SNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEM 353

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L+T + T       + S    L   K +H   I      +  +  AL+ +Y + GSMA A
Sbjct: 354 LQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAA 413

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
           + + +     D  TWNA+I G+  +   + A+E F+ +   G  ++ ITI   + A    
Sbjct: 414 QRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA---F 470

Query: 506 L----MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           L    +L  G  +HA+ + +GFEL+  V S ++ MY +CG +  +  IF+ +   +   W
Sbjct: 471 LSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTW 530

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             ++S     G  + AL +  +MR  G+  D+F+F++       LT L++G+Q+H+ +IK
Sbjct: 531 NAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIK 590

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               S+ +V  + +DMY KCG I+D + +  Q   R+   WN ++  LA+HG  ++  + 
Sbjct: 591 HGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREA 650

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F +M   G+ PD VTF+ +LSACS+ GLV E    F  M  K+G+   +EH   ++D LG
Sbjct: 651 FHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLG 710

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG+  EA   I  MP   +  + R+LL AC++ G+ E  +  A++L  L+  D SAYVL
Sbjct: 711 RAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVL 770

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
            SN+ A+  +W DV + R +M+  N+KK PA                         I+AK
Sbjct: 771 YSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAK 830

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV------ 892
           +E L K I+E GY+PDT + L D +EE+KE  L+ HSE++A A+GLI++   S       
Sbjct: 831 LEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKN 890

Query: 893 ----------------ILSNKEPLY-ANRFHHLRDGMCPCAD 917
                           I+  K  L  A RFHH   G C C+D
Sbjct: 891 LRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSD 932



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 166/701 (23%), Positives = 299/701 (42%), Gaps = 114/701 (16%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            HA ++      D F+  +L+  Y   G +     +F ++ + +++SW S++  YA++G 
Sbjct: 81  VHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG- 139

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
                V E   ++R LR    + +   +A +++ C           V G  +K GL    
Sbjct: 140 ----CVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTV 195

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR- 253
            V+ +L++++     I EA  +FD M+ERD + W  ++ A   NG  E+    F  +   
Sbjct: 196 SVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYT 255

Query: 254 ---------SGLCPDDESVQ---------------------CV----LGVISDLGKRHEE 279
                    S L P   S Q                     CV    L + S  GK  + 
Sbjct: 256 HAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDA 315

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
           +   + ++        +++ WN  ++ ++  G+   A+E  + M+++    + VTF  AL
Sbjct: 316 EFVFHKMR------ERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTAL 369

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC------VCGLRTDQ--- 390
           +A    + L +   +H   +  G +  +I+GN+L+ MY K G       VC +  D+   
Sbjct: 370 SACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEV 426

Query: 391 ----------------------------------FTLASVLRASSSLPEGLHLSKQIHVH 416
                                              T+ ++L A  S  + L     IH H
Sbjct: 427 TWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAH 486

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH-- 474
            +      ++FV ++LI +Y + G +  + Y+F+     + +TWNA     ILS N+H  
Sbjct: 487 IVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNA-----ILSANAHYG 541

Query: 475 ---KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +AL+L   M   G  LD+ + + A    G L +L +G+Q+H+  +K GFE +  V +
Sbjct: 542 PGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLN 601

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP---DDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
             +DMY KCG + D   +F  +P P      +W  +IS    +G    A   +H+M   G
Sbjct: 602 ATMDMYGKCGEIDD---VFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLG 658

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANL-IKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           + PD  TF  L+ A S    +++G    +++  K    +     + ++D+  + G + +A
Sbjct: 659 LRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEA 718

Query: 648 YILFKQMDMRNT-VLWNAMLVGLAQHGNGEETLK----LFE 683
                +M +  T ++W ++L     HGN E   K    LFE
Sbjct: 719 ENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFE 759



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 260/599 (43%), Gaps = 92/599 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +++R      D +LG      ++ S       + N+L++M+  C S+  A  +FD M +R
Sbjct: 165 TVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKER 224

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ISWNSI+ A  H+G     +  +    F  +R +   T  +T++ LL +C S+  +  
Sbjct: 225 DTISWNSIITASVHNG-----HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRW 279

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HG  +K GL  +  V  +L+++YS+ GK  +A+F+F  M+ERD++ W  M+ ++ +
Sbjct: 280 GRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVD 339

Query: 238 NGFGEEVFHLFVDLHRS-------------GLCPDDESVQCVLGVISDLGKRHEEQV--- 281
           NG       L +++ ++               C + E+++ V   +  LG  H   +   
Sbjct: 340 NGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNA 399

Query: 282 ----------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                      A A ++     + + V WN  + G+    + + AIE F  +    V  +
Sbjct: 400 LVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVN 459

Query: 332 SVTFLVALAAVAGTDN-LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------ 384
            +T +  L+A    D+ L+ G  IH   + +GF     V +SLI MY++ G +       
Sbjct: 460 YITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIF 519

Query: 385 -------------------------------------GLRTDQFTLA---SVLRASSSLP 404
                                                G+  DQF+ +   +++   + L 
Sbjct: 520 DVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLD 579

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           EG    +Q+H   IK+   ++ +V  A +D+Y + G + +   +          +WN +I
Sbjct: 580 EG----QQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILI 635

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAM 519
                     +A E F  M   G R D +T  + + AC    ++ +G    +     + +
Sbjct: 636 SALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGV 695

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
            +G E  +C    I+D+  + G + +A++  N +P  P D+ W ++++ C  +G  +LA
Sbjct: 696 PTGIEHCVC----IIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELA 750


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 261/879 (29%), Positives = 428/879 (48%), Gaps = 107/879 (12%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP R+ +SWN++++     G        EG   FR + +     S   +A L+  C  SG
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGL-----YLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG 55

Query: 174 YVWASET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            ++     VHG+  K GL+ D +VS A++++Y  +G +  ++ +F+ M +R+VV W  ++
Sbjct: 56  SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 115

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISD--LGKRHEEQVQAYAIK 287
             Y++ G  EEV  ++  +   G+  ++ S+  V+   G++ D  LG++   QV    ++
Sbjct: 116 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 175

Query: 288 LLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
             L   NS                        + + WN   + Y Q G    +   F  M
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS----- 378
            R + + +S T    L+ +   D+   G+ IHG  +K GF S V V N+L+ MY+     
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295

Query: 379 ---------------------------------KMGCVC-----GLRTDQFTLASVLRAS 400
                                             +G +C     G   +  T  S L A 
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
            + P+     + +H   + +    +  +  AL+ +Y + G M+E+  +       D+  W
Sbjct: 356 FT-PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL---MLKQGKQMHAY 517
           NA+I GY    +  KAL  F  M   G   + IT+ + + AC  LL   +L++GK +HAY
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAY 472

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
            + +GFE D  V + ++ MY KCG +  +Q +FN +   + + W  M++    +G  +  
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L +  +MR  GV  D+F+F+  + A++ L  LE+G+Q+H   +KL    D F+  +  DM
Sbjct: 533 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADM 592

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KCG I +   +      R+   WN ++  L +HG  EE    F +M   G++P  VTF
Sbjct: 593 YSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTF 652

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + +L+ACS+ GLV +    + ++   +G+EP +EH   ++D LGR+GR  EA   I  MP
Sbjct: 653 VSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP 712

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            + +  + R+LL +C++ G+ + G+  AE L  LEP D S YVL SN+FA   +W+DV +
Sbjct: 713 MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVEN 772

Query: 818 ARGEMKRKNVKKD----------------------PADL-IFAKVEGLIKRIKEGGYVPD 854
            R +M  KN+KK                       P  + I+AK+E + K IKE GYV D
Sbjct: 773 VRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVAD 832

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
           T   L D +EE+KE  L+ HSE+LA AY L+STP  S +
Sbjct: 833 TSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTV 871



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 170/731 (23%), Positives = 326/731 (44%), Gaps = 86/731 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  +  S  + D +++  ++ +Y   G +  +R++F++MPDR+++SW S++  Y+ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            GE   E V +   +++ +R      +  +++ ++  C           + G  +K GL 
Sbjct: 121 KGE--PEEVID---IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 175

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V  +L+++    G +  A ++FD M ERD + W  +  AYA+NG  EE F +F  +
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235

Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKL---------------------- 288
            R     +  +V  +L V+  +  ++    +    +K+                      
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295

Query: 289 ----LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               L++      +++ WN  ++ ++  G +  A+    +MI S    + VTF  ALAA 
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
              D    G+ +HG  + SG +   I+GN+L++MY K+G                     
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                  V G+ ++  T+ SVL A     + L   K +H + + 
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +D  V  +LI +Y + G ++ ++ LF   D  ++ TWNAM+       +  + L+L
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
            S M + G  LD+ + +  + A   L +L++G+Q+H  A+K GFE D  + +   DMY K
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG + +   +          +W  +IS    +G  +   + +H+M   G+ P   TF  L
Sbjct: 596 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR 657
           + A S    +++G   + ++I  D   +P +   I ++D+  + G + +A     +M M+
Sbjct: 656 LTACSHGGLVDKGLAYY-DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 714

Query: 658 -NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
            N ++W ++L     HGN +   K  E++     E DSV    VLS+  +    +  +E+
Sbjct: 715 PNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY---VLSSNMFA--TTGRWED 769

Query: 717 FHLMREKYGIE 727
              +R++ G +
Sbjct: 770 VENVRKQMGFK 780



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 153/678 (22%), Positives = 274/678 (40%), Gaps = 129/678 (19%)

Query: 64  ISTSDLL----LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           IS+  LL    LG+    +++ S       + N+L++M    G++ YA  +FD+M +RD 
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           ISWNSI AAYA +G     ++ E FR+F  +R      +  T++ LL +     +     
Sbjct: 210 ISWNSIAAAYAQNG-----HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            +HG  +K+G      V   L+ +Y+  G+  EA  +F  M  +D++ W  ++ ++  +G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324

Query: 240 FGEEVFHLFVDLHRSG---------------LCPD-DESVQCVLGVISDLGKRHEEQV-- 281
              +   L   +  SG                 PD  E  + + G++   G  + + +  
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384

Query: 282 -----------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                       + + ++LL     +VV WN  + GY +  D   A+  F  M    V  
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444

Query: 331 DSVTFLVALAA-VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----- 384
           + +T +  L+A +   D L  G+ +H   + +GF S   V NSLI MY+K G +      
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504

Query: 385 --------------------------------------GLRTDQFTLASVLRASSSLPEG 406
                                                 G+  DQF+ +  L A++ L   
Sbjct: 505 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV- 563

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L   +Q+H  A+K     DSF+  A  D+Y + G + E   +        L +WN +I  
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKS 521
                   +    F  M   G +   +T  + + AC    ++ +G   +      + ++ 
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
             E  +CV    +D+  + G + +A++  + +P  P+D+ W ++++ C  +G        
Sbjct: 684 AIEHCICV----IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN------- 732

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
                                       L++GR+   NL KL+   D    +S  +M+A 
Sbjct: 733 ----------------------------LDRGRKAAENLSKLEPEDDSVYVLS-SNMFAT 763

Query: 641 CGNIEDAYILFKQMDMRN 658
            G  ED   + KQM  +N
Sbjct: 764 TGRWEDVENVRKQMGFKN 781


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 271/905 (29%), Positives = 447/905 (49%), Gaps = 130/905 (14%)

Query: 139 NVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE- 194
           +V E F+    L   +    F+     + +L+LC S   +   + VH + +    +++  
Sbjct: 91  SVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSV 150

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+S  LV +Y K G + +A+ LFDGM  + +  W  M+ AY  NG       L+ ++  S
Sbjct: 151 FLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVS 210

Query: 255 GLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIK----LLLYNNNS------------ 295
           G+  D  +  C+L   G++ D  +R   +V   AIK     +++  NS            
Sbjct: 211 GIPLDACTFPCILKACGLLKD--RRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 268

Query: 296 -------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        +VV WN  +S Y   G +  A+  F  M ++++  ++ TF+ AL A 
Sbjct: 269 GARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC 328

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
             +  +  G  IH T LKS +Y  V V N+LI MY++ G +                   
Sbjct: 329 EDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWN 388

Query: 384 ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G + D   + S++ AS+     L+   QIH +A+K
Sbjct: 389 SMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLN-GMQIHAYAMK 447

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           N   +D  V  +L+D+Y +  SM   + +F+     D+ +W  +I G+  + +  +ALEL
Sbjct: 448 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 507

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  +   G  LD + I++ + AC  L ++   K++H+Y ++ G   DL + +GI+D+Y +
Sbjct: 508 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGE 566

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +  A  +F  I   D V+WT+MIS  V NG  + AL ++H M+ +GV PD  +   +
Sbjct: 567 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 626

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A++ L+AL++G++IH  LI+     +  +  +LVDMYA+CG +E +  +F  +  ++ 
Sbjct: 627 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 686

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           VLW +M+     HG G   + LF  M+   + PD + F+ VL ACS++GL++E       
Sbjct: 687 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES 746

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M+ +Y +EP  EHY  LVD LGRA   +EA + +  M  E +A +  ALLGAC++  + E
Sbjct: 747 MKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKE 806

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------- 831
            G+  A+KL+ ++P +   YVL+SN++AA  +W DV   R  MK   +KK+P        
Sbjct: 807 LGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVG 866

Query: 832 ---------------ADLIFAKVEGLIKRI-KEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                          +  I++K+  + +++ KEGGYV  T FVL + +EEEK + LY HS
Sbjct: 867 NKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHS 926

Query: 876 EKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGM 912
           E+LA AYG+++TP  + +   K                           ANRFHH + G+
Sbjct: 927 ERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGV 986

Query: 913 CPCAD 917
           C C D
Sbjct: 987 CSCGD 991


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 279/906 (30%), Positives = 428/906 (47%), Gaps = 121/906 (13%)

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET-VHGYALKIGL 190
           SG   A +  E  R F  +R+     S + +A L+  C  S ++      VHG+ +K+GL
Sbjct: 2   SGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGL 61

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           + D FV  +LV++Y  +G   +A  +F  M  ++VV W  ++ AY + G    V +++  
Sbjct: 62  LSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRR 121

Query: 251 LHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNNNS-------------- 295
           +   G+  +D ++  V+     L  +    QV  + IK  L  N S              
Sbjct: 122 MRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181

Query: 296 --------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         + + WN  ++ Y++ G    ++ CF  M R + + +S T    LA 
Sbjct: 182 VEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------------------- 381
               DNL  G+ IH   LK G+ S V   N+LI MYS  G                    
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301

Query: 382 ------------CVCGLR-----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                       C+  L+            +  T  S L A S  PE     K +H   I
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSD-PEFATEGKILHALVI 360

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                 +  V  AL+ +Y ++G M EA+ +F+     D  TWNA+I G+  S    +AL+
Sbjct: 361 HVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALK 420

Query: 479 LFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            F  M   G  ++ ITI+  + AC     +L+ G  +HA+ + +GF+ D  V + ++ MY
Sbjct: 421 AFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMY 480

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG +  + +IF+ + + +  AW  M++    +G  + AL    +MR +GV  DEF+F+
Sbjct: 481 AKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFS 540

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
             + A++ L  LE+G+Q+H   +KL C S+PFV  + +DMY KCG I+D   +  +   R
Sbjct: 541 ECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINR 600

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           + + WN +    ++HG  E+  + F +M   GV+PD VTF+ +LSACS+ G+V E    +
Sbjct: 601 SRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYY 660

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
             M +++GI  ++ H   ++D LGR+GR  EA   I  MP   +  + R+LL AC+  G+
Sbjct: 661 DSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGN 720

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----- 832
            E G+   E L+ L+P D SAYVL SNI A   +W+DV   R +M    +KK PA     
Sbjct: 721 LELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVK 780

Query: 833 ------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                               I+AK+E L K IKE GY+PD  + L D +EE+KE  L+ H
Sbjct: 781 LKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNH 840

Query: 875 SEKLARAYGLISTPPSSV----------------------ILSNKEPLY-ANRFHHLRDG 911
           SE+LA AYGLIS+P  S                       IL  K  L    RFH    G
Sbjct: 841 SERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGG 900

Query: 912 MCPCAD 917
            C C D
Sbjct: 901 QCSCTD 906



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 171/737 (23%), Positives = 327/737 (44%), Gaps = 94/737 (12%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ G   H  I+    + D F+  +L+ +Y   G    A ++F +M  ++++SW +++ A
Sbjct: 46  LIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVA 105

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y   GE +         ++R +R      +  T++ ++  C+S         V G+ +K 
Sbjct: 106 YVDYGEPSMV-----MNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKY 160

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE----- 243
           GL  +  V+ +L++++  FG + EA ++F GM E D + W  M+ AY  NG  +E     
Sbjct: 161 GLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCF 220

Query: 244 --VFHLFVDLHRSGL------CPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN- 293
             +F +  +++ + L      C   ++++   G+ S + K      V A    + +Y++ 
Sbjct: 221 SWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDA 280

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           +++ WN  ++ Y Q G+   A++    M       + VTF  AL
Sbjct: 281 GRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSAL 340

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------- 384
           AA +  +    G+ +H   +  G +  VIVGN+L+ +Y+K G +                
Sbjct: 341 AACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGV 400

Query: 385 ----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                                       G+  +  T+++VL A  +  + L     IH  
Sbjct: 401 TWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAF 460

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            I     +D +V  +LI +Y + G +  +  +F+     + + WNAM+       +  +A
Sbjct: 461 IILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEA 520

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           L+    M  +G  +DE + +  + A   L +L++G+Q+H  A+K G + +  V+S  +DM
Sbjct: 521 LKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDM 580

Query: 537 YVKCGAMVDAQSIFNDIPAPDD---VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           Y KCG + D   I   IP P +   ++W  + S    +G  + A   +H+M   GV PD 
Sbjct: 581 YGKCGEIDDVLRI---IPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDH 637

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILF 651
            TF  L+ A S    +E+G   + ++IK +      +G  + ++D+  + G   +A    
Sbjct: 638 VTFVSLLSACSHGGMVEEGLAYYDSMIK-EFGIPAKIGHCVCIIDLLGRSGRFAEAETFI 696

Query: 652 KQMDMRNT-VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGL 709
           K+M +  T  +W ++L     HGN E   K  E++    ++P D   ++   + C+ TG 
Sbjct: 697 KEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLK--LDPSDDSAYVLYSNICATTG- 753

Query: 710 VSEAYENFHLMREKYGI 726
               +E+   +R + G+
Sbjct: 754 ---KWEDVEKIRRQMGL 767



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 150/677 (22%), Positives = 261/677 (38%), Gaps = 123/677 (18%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++   +S  + LLG      ++      +  + N+L++M+   GS+  A  +F  M + 
Sbjct: 136 SVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEH 195

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ISWNS++AAY  +G        E  R F  +       +  TL+ +L  C S   +  
Sbjct: 196 DTISWNSMIAAYIRNGL-----CKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKW 250

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   LK G   +   S  L+ +YS  G+  +A+ +F GM E+D++ W  M+  YA+
Sbjct: 251 GRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQ 310

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV-QAYAIKLLLYNN--- 293
           +G   +   L   +       +  +    L   SD     E ++  A  I + L+ N   
Sbjct: 311 DGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIV 370

Query: 294 -NSNVVL------------------------WNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            N+ V L                        WN  + G+    +   A++ F  M    V
Sbjct: 371 GNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGV 430

Query: 329 QYDSVTFLVALAA-VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
             + +T    L A +A  D L  G  IH   + +GF S   V NSLI MY+K G +    
Sbjct: 431 PINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSN 490

Query: 384 ---------------------------------------CGLRTDQFTLASV---LRASS 401
                                                   G+  D+F+ +         +
Sbjct: 491 NIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLA 550

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L EG    +Q+H  A+K    ++ FV++A +D+Y + G + +   +          +WN
Sbjct: 551 ILEEG----QQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWN 606

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
            +   +       KA E F  M   G + D +T  + + AC    M+++G   +   +K 
Sbjct: 607 ILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKE 666

Query: 522 -GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G    +     I+D+  + G   +A++   ++P +P D  W ++++ C  +G       
Sbjct: 667 FGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGN------ 720

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
                                        LE GR+   NL+KLD S D    +   ++ A
Sbjct: 721 -----------------------------LELGRKAVENLLKLDPSDDSAY-VLYSNICA 750

Query: 640 KCGNIEDAYILFKQMDM 656
             G  ED   + +QM +
Sbjct: 751 TTGKWEDVEKIRRQMGL 767



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 12/191 (6%)

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA---LEQGRQIHANLIK 621
           +SG V  G    ++  +++MR  GV P     A LV A  C  +   L +G Q+H  ++K
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTA--CERSEWMLIEGVQVHGFIVK 58

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
           +   SD FVG SLV +Y   G   DA  +F++M  +N V W A++V    +G     + +
Sbjct: 59  VGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNI 118

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSE--AYENF-HLMREKYGIEPEVEHYSFLVD 738
           +  M++ G+  +  T   V+S C    L +E   Y+   H++  KYG+E  V   + L+ 
Sbjct: 119 YRRMRSEGMSCNDNTMSSVISTC--VSLENELLGYQVLGHVI--KYGLETNVSVANSLIS 174

Query: 739 ALGRAGRTKEA 749
             G  G  +EA
Sbjct: 175 MFGYFGSVEEA 185


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 244/700 (34%), Positives = 373/700 (53%), Gaps = 99/700 (14%)

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
           N  A+  F+ + RS    D  +    L       +  +G+Q+H   +K GF   V VG S
Sbjct: 73  NKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTS 132

Query: 373 LINMYSKMGCVC-------------------------------------------GLRTD 389
           L++MY K   V                                            G++ +
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192

Query: 390 QFTLASVL---RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
            FT A+VL    A  ++ +G+    Q+H   IK+   +  FV  +++++Y ++  +++A+
Sbjct: 193 PFTFAAVLGGLAADGAVEKGV----QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F++ +  +  +WN+MI G++ +    +A ELF  M   G +L +   AT +K C  + 
Sbjct: 249 AVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIK 308

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMI 565
            +   KQ+H   +K+G + DL + + ++  Y KC  + DA  +F  +    +V +WT +I
Sbjct: 309 EMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAII 368

Query: 566 SGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTA-LEQGRQIHANLIKLD 623
           SG V NG  D A++++ QMR   GV P+EFTF+ ++ A +  TA +EQG+Q H+  IK  
Sbjct: 369 SGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 428

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
            S+   V  +LV MYAK GNIE A  +FK+   R+ V WN+M+ G AQHG G+++LK+FE
Sbjct: 429 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 488

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           +M++  +E D +TFIGV+SAC++ GLV+E    F LM + Y I P +EHYS +VD   RA
Sbjct: 489 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRA 548

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  ++A +LI  MPF A A++ R LL ACRV  + + G+  AEKL++L+P DS+AYVLLS
Sbjct: 549 GMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLS 608

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           NI+A A  W +    R  M  K VKK+                        +D I+ K+E
Sbjct: 609 NIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLE 668

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
            L  R+K+ GY PDT +VL DVEEE KE  L  HSE+LA A+GLI+TPP + I       
Sbjct: 669 ELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLR 728

Query: 894 --------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                         +  ++ +   +NRFHH + G C C D
Sbjct: 729 VCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGD 768



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 234/537 (43%), Gaps = 80/537 (14%)

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD   ++ +     +L  ++ N   +E  +LF+ L RSG   D  S+ CVL V   L  
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 276 R-HEEQVQAYAIKLLLYNNNS----------------------------NVVLWNKKLSG 306
           R   +QV    IK     + S                            NVV W   L+G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q G N  A++ F  M    ++ +  TF   L  +A    +  G Q+H   +KSG  S 
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 367 VIVGNSLINMYSKMGCVC------------------------------------------ 384
           + VGNS++NMYSK   V                                           
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 385 -GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G++  Q   A+V++  +++ E +  +KQ+H   IKN +  D  + TAL+  Y +   + 
Sbjct: 288 EGVKLTQTIFATVIKLCANIKE-MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 444 EAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKA 501
           +A  LF    G  ++ +W A+I GY+ +  + +A+ LF  M    G   +E T ++ + A
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNA 406

Query: 502 CGC-LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           C      ++QGKQ H+ ++KSGF   LCVSS ++ MY K G +  A  +F      D V+
Sbjct: 407 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 466

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W +MISG   +G    +L I+ +MR   +  D  TF  ++ A +    + +G Q + +L+
Sbjct: 467 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG-QRYFDLM 525

Query: 621 KLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN 674
             D    P +     +VD+Y++ G +E A  L  +M       +W  +L     H N
Sbjct: 526 VKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 582



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 169/312 (54%), Gaps = 1/312 (0%)

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           ++ LF+      L+  N ++F +  ++ + +AL LF  +  SG   D  +++  +K CGC
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L     GKQ+H   +K GF  D+ V + ++DMY+K  ++ D + +F+++   + V+WT++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ++G   NG  + AL ++ QM+L G+ P+ FTFA ++   +   A+E+G Q+H  +IK   
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            S  FVG S+V+MY+K   + DA  +F  M+ RN V WN+M+ G   +G   E  +LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  GV+     F  V+  C+    +S A +  H    K G + ++   + L+ A  +  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFA-KQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 745 RTKEAGELILSM 756
              +A +L   M
Sbjct: 344 EIDDAFKLFCMM 355



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 232/543 (42%), Gaps = 89/543 (16%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
           ++++LFD+ P + L   N +L  ++     N +N  E   LF  LR S + T   +L+ +
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSR----NDQN-KEALNLFLGLRRSGSPTDGSSLSCV 98

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LK+C         + VH   +K G V D  V  +LV++Y K   + + + +FD M+ ++V
Sbjct: 99  LKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV 158

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------- 278
           V W  +L  Y +NG  E+   LF  +   G+ P+  +   VLG ++  G   +       
Sbjct: 159 VSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTM 218

Query: 279 --------------EQVQAYAIKLLLYN--------NNSNVVLWNKKLSGYLQVGDNHGA 316
                           V  Y+  L++ +         N N V WN  ++G++  G +  A
Sbjct: 219 VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEA 278

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG-------------- 362
            E F  M    V+     F   +   A    ++  +Q+H   +K+G              
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338

Query: 363 ------------------------FYSAVIVG-------NSLINMYSKMGCVCGLRTDQF 391
                                    ++A+I G       +  +N++ +M    G+  ++F
Sbjct: 339 YSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEF 398

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T +SVL A ++    +   KQ H  +IK+       VS+AL+ +Y + G++  A  +F+ 
Sbjct: 399 TFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 458

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
           +   DL +WN+MI GY       K+L++F  M +    LD IT    + AC    ++ +G
Sbjct: 459 QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG 518

Query: 512 KQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMI 565
           ++     +  Y +    E   C    ++D+Y + G +  A  + N +P P     W T++
Sbjct: 519 QRYFDLMVKDYHIVPTMEHYSC----MVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLL 574

Query: 566 SGC 568
           + C
Sbjct: 575 AAC 577



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 11/217 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           ++++   +  ++   K  H +++ +    D  +   LM  YS+C  +  A +LF  M   
Sbjct: 299 TVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV 358

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLS-SGY 174
           ++++SW +I++ Y  +G  +         LF  + RE     +  T + +L  C + +  
Sbjct: 359 QNVVSWTAIISGYVQNGRTD-----RAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTAS 413

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V   +  H  ++K G      VS ALV +Y+K G I  A  +F    +RD+V W  M+  
Sbjct: 414 VEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISG 473

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           YA++G G++   +F ++    L  D  +    +GVIS
Sbjct: 474 YAQHGCGKKSLKIFEEMRSKNLELDGIT---FIGVIS 507



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 11/176 (6%)

Query: 63  AISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           A  T+ +  GK  H+  + S       +++ L+TMY++ G++  A  +F +  DRDL+SW
Sbjct: 408 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSW 467

Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
           NS+++ YA  G G      +  ++F  +R        +T   ++  C  +G V   +   
Sbjct: 468 NSMISGYAQHGCGK-----KSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 522

Query: 183 GYALK---IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
              +K   I    + +    +V++YS+ G + +A  L + M       +W+ +L A
Sbjct: 523 DLMVKDYHIVPTMEHY--SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 310/1055 (29%), Positives = 491/1055 (46%), Gaps = 167/1055 (15%)

Query: 11   PRHKHTYVIFSSFTKDTYRNLP--SFSLSLLPFLQKS---------HFSSSSSSSQWFSI 59
            P   H  ++F+ FT      LP  S  L +L  L KS         H     S +Q +  
Sbjct: 30   PHSHHYPLLFNPFTNP----LPPSSIPLQVLVDLYKSSQLHHNPVQHDEKIESLAQRY-- 83

Query: 60   LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
             R++  + D    +  H ++  +  + D FL N L+ +Y+R G L   R++FD+MP R+L
Sbjct: 84   -RYSCGSKD---AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNL 139

Query: 120  ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY--VWA 177
            +SW+ +++ Y  +   N     E   LFR +       +      +++ C   G   +  
Sbjct: 140  VSWSCLISGYTRNRMPN-----EACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKF 194

Query: 178  SETVHGYALKIGLVWDEFVSGALVNIY-SKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +HG   K   V D   S  L+++Y +  G +  A+  FD +  R++V    M+  Y 
Sbjct: 195  GMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYC 254

Query: 237  ENGFGEEVFHLFVDLHRS----GLCPDDESVQCVLGVISDL------------------G 274
            + G     F +F  + +     GL P++ +   ++     L                  G
Sbjct: 255  QRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSG 314

Query: 275  KRHEEQVQA-------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
              H+  V +             YA  +    +  NVV  N  + G ++      A+E F+
Sbjct: 315  FLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFM 374

Query: 322  NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ----QIHGTTLKSGFYSAVI-VGNSLINM 376
             M + +V+ +  ++++ L A      L  G+    ++H   ++SG  +A I +GN LINM
Sbjct: 375  EM-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINM 433

Query: 377  YSKMG-----CVC-----------------GL-----------------RTD----QFTL 393
            Y+K G     CV                  GL                 RT+     FT+
Sbjct: 434  YAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTM 493

Query: 394  ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
             S L + +SL   + + +Q+H   +K     D  VS AL+ +Y   G + E +  F    
Sbjct: 494  ISALSSCASLG-WISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552

Query: 454  GFDLATWNAMIFGYILSNNSH-KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
             +D  +WN++I     S  S  +A+E F  M  +G   + +T  T + A   L + + GK
Sbjct: 553  DYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGK 612

Query: 513  QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDN 571
            Q+HA  +K     D  + + +L  Y KCG M   ++IF+ +    D+V+W +MISG + N
Sbjct: 613  QIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHN 672

Query: 572  GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
                 A+ +   M   G   D FTFA ++ A + +  LE+G ++H   ++    SD  +G
Sbjct: 673  ELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIG 732

Query: 632  ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
             +LVDMYAKCG I+ A   F+ M  RN   WN+M+ G A+HG+G ++L LF  MK  G  
Sbjct: 733  SALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPL 792

Query: 692  PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
            PD VTF+GVLSACS+ GLV+E + +F  M E YG+ P +EH+S +VD LGR G   +  +
Sbjct: 793  PDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMED 852

Query: 752  LILSMPFEASASMHRALLGA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
             +  MP + +  + R +LGA CR  G +T  G+  AE L+ +EP ++  Y+LLSN++A+ 
Sbjct: 853  FLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASG 912

Query: 810  NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
             +WDDV   R  M++  VKK+                         DLI+ K++ L  ++
Sbjct: 913  GKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKM 972

Query: 847  KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV---ILSNKEPLY-- 901
            +  GY+P+T F L D+E E KE  L YHSEK+A A+ L  T PS +   IL N       
Sbjct: 973  RLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAFVL--TRPSKMPIRILKNLRVCGDC 1030

Query: 902  -------------------ANRFHHLRDGMCPCAD 917
                               +NRFHH  +G C C D
Sbjct: 1031 HSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGD 1065


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/632 (37%), Positives = 341/632 (53%), Gaps = 69/632 (10%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGA--IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            N +VV WN  ++GY Q G +  +  +E F  M   N   ++ TF     A +   +   
Sbjct: 67  QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------------- 388
           G+  H   +K      V VG+SL+NMY K G     R                       
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186

Query: 389 ---------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                                ++F   SVL A + LPE ++  KQIH  A+KN  ++   
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALT-LPELVNNGKQIHCIAVKNGLLSIVS 245

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  AL+ +Y + GS+ +A   FE     +  TW+AMI GY  S +S KAL+LFS MH SG
Sbjct: 246 VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSG 305

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R  E T    + AC  L    +GKQ+H Y +K GFE  + V + ++DMY KC ++VDA+
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
             F+ +  PD V WT+MI G V NGE + ALS+Y +M + G++P+E T A ++KA S L 
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           ALEQG+QIHA  +K     +  +G +L  MYAKCG ++D  ++F++M  R+ + WNAM+ 
Sbjct: 426 ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMIS 485

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GL+Q+G G+E L+LFE+M+  G +PD VTF+ +LSACS+ GLV   +  F +M +++G++
Sbjct: 486 GLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMD 545

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P VEHY+ +VD L RAG+ KEA E   S   +    + R +LGACR   + E G +  EK
Sbjct: 546 PRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEK 605

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           LM L   +SSAYVLLS+I++A  +W+DV   R  MK + V K+P                
Sbjct: 606 LMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVV 665

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTD 856
                     I  ++  L K++K+ GY P TD
Sbjct: 666 KDQMHPQIGDIHVELRQLSKQMKDEGYEPATD 697



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 6/335 (1%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L   K +H   IK+ +    +++ +L+++Y +   + EA+++FE     D+ +WN +I G
Sbjct: 22  LQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80

Query: 467 YIL---SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           Y     S +SH  +ELF  M       +  T A    A   L+    G+  HA A+K   
Sbjct: 81  YSQHGPSGSSH-VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             D+ V S +++MY K G   +A+ +F+ +P  + V+W TMISG         AL ++  
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           MR      +EF F  ++ A +    +  G+QIH   +K    S   VG +LV MYAKCG+
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           ++DA   F+    +N++ W+AM+ G AQ G+ ++ LKLF  M   G+ P   TF+GV++A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           CS  G   E  +  H    K G E ++   + LVD
Sbjct: 320 CSDLGAAWEG-KQVHDYLLKLGFESQIYVMTALVD 353



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 235/536 (43%), Gaps = 85/536 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S+  +F+ L        L  GK+ HA+I+ SS     ++ N+L+ +Y++C  L  A+ +F
Sbjct: 5   SNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVF 63

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           +++ ++D++SWN I+  Y+  G   + +V E   LF+ +R   T  +  T A +     +
Sbjct: 64  ERIQNKDVVSWNCIINGYSQHGPSGSSHVME---LFQRMRAENTAPNAHTFAGVFTAAST 120

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                     H  A+K+    D FV  +L+N+Y K G   EA+ +FD M ER+ V W  M
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI 286
           +  YA      E   LF  + R     ++     VL  ++     + GK    Q+   A+
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGK----QIHCIAV 236

Query: 287 K-------------LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           K             + +Y               +++ N + W+  ++GY Q GD+  A++
Sbjct: 237 KNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALK 296

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F +M  S ++    TF+  + A +       G+Q+H   LK GF S + V  +L++MY+
Sbjct: 297 LFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYA 356

Query: 379 KMGCVC-------------------------------------------GLRTDQFTLAS 395
           K   +                                            G+  ++ T+AS
Sbjct: 357 KCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMAS 416

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           VL+A SSL   L   KQIH   +K     +  + +AL  +Y + G + +   +F      
Sbjct: 417 VLKACSSLA-ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR 475

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
           D+ +WNAMI G   +    +ALELF  M   G + D +T    + AC  + ++++G
Sbjct: 476 DVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 182/388 (46%), Gaps = 47/388 (12%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFL 90
           PS S  ++   Q+    +++ ++  F+ +  A ST  D   G+  HA  +      D F+
Sbjct: 86  PSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFV 145

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            ++LM MY + G    AR++FD MP+R+ +SW ++++ YA     + +   E   LFR +
Sbjct: 146 GSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA-----SQKLAAEALGLFRLM 200

Query: 151 RES------ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           R          FTS L+   L +L      V   + +H  A+K GL+    V  ALV +Y
Sbjct: 201 RREEEGENEFVFTSVLSALTLPEL------VNNGKQIHCIAVKNGLLSIVSVGNALVTMY 254

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G + +A   F+   +++ + W  M+  YA++G  ++   LF  +H SG+ P + +  
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314

Query: 265 CVLGVISDLGKRHE-EQVQAYAIKLLL----------------------------YNNNS 295
            V+   SDLG   E +QV  Y +KL                              Y    
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++VLW   + GY+Q G+N  A+  +  M    +  + +T    L A +    L  G+QIH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             T+K GF   V +G++L  MY+K GC+
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCL 462


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 255/722 (35%), Positives = 386/722 (53%), Gaps = 96/722 (13%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           Y++++     NSN  +WN  +  Y+Q      A+  +  M+++NV  D+ T+ + + A A
Sbjct: 93  YSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA 152

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ---FTLASVLRAS 400
                  G++IH   LK GF S V V N+LINMY+    VCG   D    F  + VL + 
Sbjct: 153 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYA----VCGNMRDARKLFDESPVLDSV 208

Query: 401 S--SLPEG------LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           S  S+  G      +  +K I     + + VA    S ++I +  + G + EA  LF   
Sbjct: 209 SWNSILAGYVKKGDVEEAKLIFDQMPQRNIVA----SNSMIVLLGKMGQVMEAWKLFNEM 264

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           D  D+ +W+A+I GY  +    +AL +F  M+ +G RLDE+ + + + AC  L ++K GK
Sbjct: 265 DEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGK 324

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +H   ++ G E  + + + ++ MY   G ++DAQ +FN     D ++W +MISGC+  G
Sbjct: 325 MIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCG 384

Query: 573 -------------EEDLA------------------LSIYHQMRLSGVVPDEFTFAILVK 601
                        E+D+                   L+++H+M+L  + PDE     ++ 
Sbjct: 385 SVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVIS 444

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A + L AL+QG+ +HA + K     +  +G +L+DMY KCG +E+A  +F  M+ +    
Sbjct: 445 ACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSS 504

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WNA+++GLA +G  E +L +F +MK +GV P+ +TF+GVL AC + GLV E   +F  M 
Sbjct: 505 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 564

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
           EK+GIEP V+HY  +VD LGRAG   EA +LI SMP     +   ALLGAC+  GDTE G
Sbjct: 565 EKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMG 624

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-DLIFA--- 837
           + V  KL+ L+P     +VLLSNIFA+   W+DV   RG MK++ V K P   LI A   
Sbjct: 625 ERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGV 684

Query: 838 ---------------KVEGLI----KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                          KVEG++    KR+K  GY PDT+ V LD++EEEKE  L+ HSEKL
Sbjct: 685 VHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKL 744

Query: 879 ARAYGLIS-TPPSSV-ILSNKE-------------PLYA--------NRFHHLRDGMCPC 915
           A A+GL++ +PP+ + I+ N                 YA        +RFH+ ++G C C
Sbjct: 745 AIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSC 804

Query: 916 AD 917
            D
Sbjct: 805 MD 806



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 170/662 (25%), Positives = 308/662 (46%), Gaps = 65/662 (9%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARI 79
            SS  K T+ + P+F  ++   + ++H  +  +  Q+  IL   I T             
Sbjct: 21  LSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTG------------ 68

Query: 80  LNSSQIPDRFLTNNLMTMYSRCG--SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
                I D F  + L+   +      L Y+ ++FD++ + +   WN+++ AY  S     
Sbjct: 69  ----FISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQS----- 119

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            +  +   L++ + ++       T   +++ C      +  + +H + LK+G   D +V 
Sbjct: 120 NSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 179

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+N+Y+  G +R+A+ LFD     D V W  +L  Y + G  EE   +F  + +  + 
Sbjct: 180 NTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIV 239

Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
             + S+  +LG    +G+  E      A KL    +  ++V W+  +SGY Q G    A+
Sbjct: 240 ASN-SMIVLLG---KMGQVME------AWKLFNEMDEKDMVSWSALISGYEQNGMYEEAL 289

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F+ M  + ++ D V  +  L+A A    +  G+ IHG  ++ G  S V + N+LI+MY
Sbjct: 290 VMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMY 349

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
           S  G +                +  L  G H   QI           +S +S  +     
Sbjct: 350 SGSGEIMD--------------AQKLFNGSHNLDQIS---------WNSMISGCM----- 381

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + GS+ +A  LF+     D+ +W+A+I GY   +   + L LF  M     R DE  + +
Sbjct: 382 KCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVS 441

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            + AC  L  L QGK +HAY  K+G ++++ + + +LDMY+KCG + +A  +FN +    
Sbjct: 442 VISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKG 501

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
             +W  +I G   NG  + +L ++ +M+ +GV+P+E TF  ++ A   +  +++GR   A
Sbjct: 502 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 561

Query: 618 NLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGN 674
           ++I+     +P V     +VD+  + G + +A  L + M M   V  W A+L    +HG+
Sbjct: 562 SMIE-KHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGD 620

Query: 675 GE 676
            E
Sbjct: 621 TE 622



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 15/204 (7%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA I  +    +  L   L+ MY +CG +  A  +F+ M ++ + SWN+++   A 
Sbjct: 455 GKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAV 514

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-KIGL 190
           +G      V     +F  ++ +    + +T   +L  C   G V          + K G+
Sbjct: 515 NGL-----VERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI 569

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENG---FGEEVFH 246
             +    G +V++  + G + EA+ L + M    DV  W  +L A  ++G    GE V  
Sbjct: 570 EPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGR 629

Query: 247 LFVDLHRSGLCPDDESVQCVLGVI 270
             ++L      PD +    +L  I
Sbjct: 630 KLIELQ-----PDHDGFHVLLSNI 648


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 264/856 (30%), Positives = 419/856 (48%), Gaps = 120/856 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENG 239
           +H   + +GL   +F SG L++ YS F     +  +F  +   ++V +W  ++RA+++NG
Sbjct: 26  IHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNG 85

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNN 294
           +  +    +  L  S + PD  +   V+   +     ++G    +Q+     +  LY  N
Sbjct: 86  WFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGN 145

Query: 295 S------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
           +                        ++V WN  +SGY   G    A+E +  +  S +  
Sbjct: 146 ALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVP 205

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------- 381
           DS T    L A A    +  GQ +HG TLKSG  S  +V N L+ MY K           
Sbjct: 206 DSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVF 265

Query: 382 -------------CVCG--------------------LRTDQFTLASVLRASSSLPEGLH 408
                         +CG                     + D  T+ SVL A   L + L 
Sbjct: 266 DEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRD-LS 324

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L+K I+ + ++   V +S V   LIDVY + G M  A  +F + +  D  +WN++I GYI
Sbjct: 325 LAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
            S +  +A++LF  M    E+ D IT    +     L  LK GK +H+  +KSG  +DL 
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLS 444

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           VS+ ++DMY KCG + D+  IFN +   D V W T+IS CV  G+    L +  QMR + 
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNK 504

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           VVPD  TF + +   + L A   G++IH  L++    S+  +G +L++MY+KCG +E ++
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSF 564

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M  R+ V W  M+     +G GE+ L+ F DM+  G+ PDSV FI ++ ACS++G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSG 624

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV +    F  M+  Y I+P +EHY+ +VD L R+ +  +A E I +MP E  AS+  ++
Sbjct: 625 LVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASV 684

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L ACR  GD ET + V+ +++ L P D    +L SN +AA  +WD V+  R  ++ K++K
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIK 744

Query: 829 KDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV-EE 864
           K+P                       ++ I   +E L   + + GY+PD+  V  ++ EE
Sbjct: 745 KNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEE 804

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY-- 901
           EEK R +  HSE+LA A+GL++T P + +                     +  +E L   
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRD 864

Query: 902 ANRFHHLRDGMCPCAD 917
           ANRFH  +DG+C C D
Sbjct: 865 ANRFHLFKDGICSCKD 880



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 161/633 (25%), Positives = 279/633 (44%), Gaps = 87/633 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++      D  +G   + +IL      D ++ N L+ MYSR G L  AR++FD+MP R
Sbjct: 111 SVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR 170

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SWNS+++ Y+  G        E   ++  LR S       T++ +L    +   V  
Sbjct: 171 DLVSWNSLISGYSSHG-----YYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQ 225

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG+ LK G+     V+  L+ +Y KF +  +A+ +FD M  RD V +  M+  Y +
Sbjct: 226 GQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK 285

Query: 238 NGFGEEVFHLFVDLHRSGLCPDD---ESVQCVLGVISDL-------------GKRHEEQV 281
               EE   +F++ +     PD     SV C  G + DL             G   E  V
Sbjct: 286 LEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTV 344

Query: 282 QAYAIKLL-----------LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +   I +            ++N+    + V WN  +SGY+Q GD   A++ F  M+    
Sbjct: 345 KNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------- 381
           Q D +T+L+ ++      +L  G+ +H   +KSG Y  + V N+LI+MY+K G       
Sbjct: 405 QADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLK 464

Query: 382 -------------------CV------CGLRT-----------DQFTLASVLRASSSLPE 405
                              CV       GL+            D  T    L   +SL  
Sbjct: 465 IFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLA- 523

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
              L K+IH   ++    ++  +  ALI++Y + G +  +  +FE     D+ TW  MI+
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIY 583

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            Y +     KALE F  M  SG   D +     + AC    ++++G       MK+ +++
Sbjct: 584 AYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFE-KMKTHYKI 642

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYH 582
           D  +   + ++D+  +   +  A+     +P  PD   W +++  C  +G+ + A  +  
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERV-- 700

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
             R+  + PD+  ++IL  AS+   AL +  ++
Sbjct: 701 SRRIIELNPDDPGYSIL--ASNAYAALRKWDKV 731


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/713 (33%), Positives = 357/713 (50%), Gaps = 90/713 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N  VV WN  ++GY QVG    A   F  M+   ++   +TFL  L A +    LN G++
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKE 179

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +H   + +GF S   +G +L++MY K G +                              
Sbjct: 180 VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGD 239

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         GL+ ++ +  S+L    + PE L   K +H   +    V D  V+T
Sbjct: 240 WEKAFELFYRMQQVGLKPNKISFLSILDGCWT-PEALAWGKAVHAQCMNAGLVDDIRVAT 298

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +LI +Y   GS+  A  +F+N    D+ +W  MI GY  + N   A  LF+ M   G + 
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D IT    + AC     L   +++H+    +GF  DL VS+ ++ MY KCGA+ DA+ +F
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVF 418

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +P  D V+W+ MI   V+NG    A   +H M+ S + PD  T+  L+ A   L AL+
Sbjct: 419 DAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALD 478

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G +I+   IK D  S   +G +L+ M AK G++E A  +F  M  R+ + WNAM+ G +
Sbjct: 479 VGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYS 538

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HGN  E L LF+ M      P+SVTF+GVLSACS  G V E    F  + E  GI P V
Sbjct: 539 LHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTV 598

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           + Y  +VD LGRAG   EA  LI SMP + ++S+  +LL ACR+ G+ +  +  AE+ + 
Sbjct: 599 KLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLM 658

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           ++P+D + YV LS+++AAA  W++V   R  M+ + ++K+                    
Sbjct: 659 IDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDR 718

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                  I+A++  L+  IK  GY+P T  VL DV E++KE A+ YHSEKLA AYG++S 
Sbjct: 719 SHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSL 778

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P  + I                     ++ +E +   A+RFHH +DG+C C D
Sbjct: 779 PSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGD 831



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 205/430 (47%), Gaps = 44/430 (10%)

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------ 384
           DS T++          +  LG+Q+    ++ G    +   N+LI +YS  G V       
Sbjct: 56  DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115

Query: 385 -------------------------------------GLRTDQFTLASVLRASSSLPEGL 407
                                                GL     T  SVL A SS P GL
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS-PAGL 174

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           +  K++H   +    V+D  + TAL+ +Y + GSM +A  +F+     D++T+N M+ GY
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
             S +  KA ELF  M   G + ++I+  + +  C     L  GK +HA  M +G   D+
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI 294

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V++ ++ MY  CG++  A+ +F+++   D V+WT MI G  +NG  + A  ++  M+  
Sbjct: 295 RVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEE 354

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+ PD  T+  ++ A +    L   R+IH+ +      +D  V  +LV MYAKCG I+DA
Sbjct: 355 GIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDA 414

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F  M  R+ V W+AM+    ++G G E  + F  MK   +EPD VT+I +L+AC + 
Sbjct: 415 RQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHL 474

Query: 708 GLVSEAYENF 717
           G +    E +
Sbjct: 475 GALDVGMEIY 484



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/600 (25%), Positives = 275/600 (45%), Gaps = 82/600 (13%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  +  + +      D  LGK     I+   +  + +  N L+ +YS CG++  AR++FD
Sbjct: 57  SRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFD 116

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS- 171
            + ++ +++WN+++A YA  G     +V E F LFR + +     S +T   +L  C S 
Sbjct: 117 SVENKTVVTWNALIAGYAQVG-----HVKEAFALFRQMVDEGLEPSIITFLSVLDACSSP 171

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
           +G  W  E VH   +  G V D  +  ALV++Y K G + +A+ +FDG+  RDV  + VM
Sbjct: 172 AGLNWGKE-VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVM 230

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDES---------------------VQCV-LGV 269
           +  YA++G  E+ F LF  + + GL P+  S                      QC+  G+
Sbjct: 231 VGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGL 290

Query: 270 ISDLGKRHEEQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
           + D+ +     ++ Y        A ++       +VV W   + GY + G+   A   F 
Sbjct: 291 VDDI-RVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFA 349

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M    +Q D +T++  + A A + NLN  ++IH     +GF + ++V  +L++MY+K G
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCG 409

Query: 382 CVCGLR---------------------------TDQFTLASVLRASSSLPEG-------- 406
            +   R                           T+ F    +++ S+  P+G        
Sbjct: 410 AIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLN 469

Query: 407 -------LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
                  L +  +I+  AIK D V+   +  ALI +  ++GS+  A Y+F+     D+ T
Sbjct: 470 ACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVIT 529

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WNAMI GY L  N+ +AL LF  M     R + +T    + AC     + +G++   Y +
Sbjct: 530 WNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLL 589

Query: 520 KS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           +  G    + +   ++D+  + G + +A+ +   +P  P    W++++  C  +G  D+A
Sbjct: 590 EGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVA 649



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 2/363 (0%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L KQ+  H I+     + +    LI +Y   G++ EA  +F++ +   + TWNA+I GY 
Sbjct: 75  LGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYA 134

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
              +  +A  LF  M   G     IT  + + AC     L  GK++HA  + +GF  D  
Sbjct: 135 QVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFR 194

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + + ++ MYVK G+M DA+ +F+ +   D   +  M+ G   +G+ + A  ++++M+  G
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P++ +F  ++       AL  G+ +HA  +      D  V  SL+ MY  CG+IE A 
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F  M +R+ V W  M+ G A++GN E+   LF  M+  G++PD +T++ +++AC+ + 
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
            ++ A E  H   +  G   ++   + LV    + G  K+A ++  +MP     S   A+
Sbjct: 375 NLNHARE-IHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWS-AM 432

Query: 769 LGA 771
           +GA
Sbjct: 433 IGA 435



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 119/229 (51%)

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A ++   +   G  +D  T     + C  L     GKQ+  + ++ G +L++   + ++ 
Sbjct: 41  ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y  CG + +A+ IF+ +     V W  +I+G    G    A +++ QM   G+ P   T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F  ++ A S    L  G+++HA ++     SD  +G +LV MY K G+++DA  +F  + 
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           +R+   +N M+ G A+ G+ E+  +LF  M+  G++P+ ++F+ +L  C
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 245/772 (31%), Positives = 381/772 (49%), Gaps = 101/772 (13%)

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           W+  + G     Y+  G +  A+FLFD M ERDVV W  ML  Y +NGF  +   +F  +
Sbjct: 107 WNTMIFG-----YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKM 161

Query: 252 HRSGLCPDDESVQCVLGV---ISDLG---KRHEEQVQA---------------------- 283
               +  D  +   VL     I D G   + H   +Q                       
Sbjct: 162 RLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKL 221

Query: 284 -YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
            +A  +       N V W+  ++GY++       ++ +  M+   +     TF  A  + 
Sbjct: 222 DHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-------------- 388
           AG     LG Q+H   LK+ F    IVG + ++MY+K   +   R               
Sbjct: 282 AGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHN 341

Query: 389 -----------------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                        D+ +L+  L A S++ +G     Q+H  A+K
Sbjct: 342 ALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI-KGYLEGIQLHGLAVK 400

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                +  V+  ++D+Y + G++ EA  +F++ +  D  +WNA+I  +  + +  + L L
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M  S    D+ T  + VKAC     L  G ++H   +KSG  LD  V S I+DMY K
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK 520

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +V+A+ I   +     V+W ++ISG     + + ALS + +M   GV+PD FT+A +
Sbjct: 521 CGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATV 580

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           +   + L  +E G+QIH  ++KL   SD ++  ++VDMY+KCGN++D+ I+F++   R+ 
Sbjct: 581 LDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDY 640

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           V W+AM+   A HG GE+ +KLFE+M+   V+P+   FI VL AC++ G V +    F  
Sbjct: 641 VTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFRE 700

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           MR  YG++P++EHYS +VD LGR+G+  EA ELI SMPFEA   + R LLG CR+QG+ E
Sbjct: 701 MRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVE 760

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------- 831
             +  A  L+ L+P DSSAYVLLSN++A A  W +V   R  MK   +KK+P        
Sbjct: 761 VAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVR 820

Query: 832 ---------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                          ++ I+ +   L+  +K  GYVP+ D  LLD E +E++
Sbjct: 821 DEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQD 872



 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 185/644 (28%), Positives = 294/644 (45%), Gaps = 86/644 (13%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T +LT + + + C +   +   +  H      G V   FVS  L+  Y K   +  A  +
Sbjct: 36  TKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNV 95

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD M +RDV+ W  M+  YA  G G   F  F                    +   + +R
Sbjct: 96  FDKMPQRDVISWNTMIFGYA--GVGNMEFAQF--------------------LFDSMPER 133

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                              +VV WN  LS YLQ G +  +IE F  M    +Q+D  TF 
Sbjct: 134 -------------------DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFA 174

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS----------------KM 380
           V L A  G ++  LG Q+H   ++ GF S V+ G +L++MYS                + 
Sbjct: 175 VVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPER 234

Query: 381 GCVC---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQI 413
             VC                           G+   Q T AS  R+ + L     L  Q+
Sbjct: 235 NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGL-SAFELGTQL 293

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H +A+K +   D+ V TA +D+Y +   M +A  +F         + NA+I GY   +  
Sbjct: 294 HAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQV 353

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            +ALE+F  +  S    DEI+++ A+ AC  +    +G Q+H  A+K G + ++CV++ I
Sbjct: 354 LEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTI 413

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LDMY KCGA+++A  IF+D+   D V+W  +I+    N   +  L+++  M  S + PD+
Sbjct: 414 LDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDD 473

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           +TF  +VKA +   AL  G ++H  +IK     D FVG +++DMY KCG + +A  + ++
Sbjct: 474 YTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHER 533

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ R TV WN+++ G +    GE  L  F  M   GV PD+ T+  VL  C+    V E 
Sbjct: 534 LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV-EL 592

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +  H    K  +  +V   S +VD   + G  +++  +    P
Sbjct: 593 GKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP 636



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 300/713 (42%), Gaps = 117/713 (16%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRC------------------------------ 101
           GK  HA+I  +  +P  F++N L+  Y +C                              
Sbjct: 57  GKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG 116

Query: 102 -GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            G++ +A+ LFD MP+RD++SWNS+L+ Y  +G        +   +F  +R         
Sbjct: 117 VGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHR-----KSIEIFTKMRLLEIQHDYA 171

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T A +LK C           VH  A+++G   D     ALV++YS   K+  A  +F  M
Sbjct: 172 TFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEM 231

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EE 279
            ER+ V W  ++  Y  N    E   L+  +   G+     +        + L       
Sbjct: 232 PERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGT 291

Query: 280 QVQAYAIKLLL-YNN---------------------------NSNVVLWNKKLSGYLQVG 311
           Q+ AYA+K    Y+N                           N      N  + GY +  
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQD 351

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A+E F ++ +S + +D ++   AL A +       G Q+HG  +K G    + V N
Sbjct: 352 QVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVAN 411

Query: 372 SLINMYSKMGC---------------------------------------VCGLRT---- 388
           ++++MY+K G                                        V  LR+    
Sbjct: 412 TILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEP 471

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D +T  SV++A +   + L+   ++H   IK+    D FV +A+ID+YC+ G + EAE +
Sbjct: 472 DDYTFGSVVKACAG-KKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKI 530

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            E  +     +WN++I G+        AL  FS M   G   D  T AT +  C  L  +
Sbjct: 531 HERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV 590

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + GKQ+H   +K     D+ ++S I+DMY KCG M D++ +F   P  D V W+ MI   
Sbjct: 591 ELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAY 650

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG----RQIHANLIKLDC 624
             +G  + A+ ++ +M+L  V P+   F  +++A + +  +++G    R++ ++   LD 
Sbjct: 651 AYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHY-GLDP 709

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
             + +    +VD+  + G + +A  L + M    + V+W  +L      GN E
Sbjct: 710 QMEHYS--CMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVE 760



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 254/596 (42%), Gaps = 86/596 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D  LG   H   +      D      L+ MYS C  L +A  +F +MP+R+
Sbjct: 176 VLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERN 235

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + W++++A Y  +     +  TEG +L++ + +     S+ T A   + C         
Sbjct: 236 SVCWSAVIAGYVRN-----DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H YALK    +D  V  A +++Y+K  ++ +A+ +F+            ++  YA  
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKL---------- 288
               E   +F  L +S L  D+ S+   L   S + K + E +Q + + +          
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI-KGYLEGIQLHGLAVKCGLDFNICV 409

Query: 289 ------------------LLYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                             L++++    + V WN  ++ + Q       +  FV+M+RS +
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
           + D  TF   + A AG   LN G ++HG  +KSG      VG+++I+MY K G +     
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK 529

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G+  D FT A+VL   ++L  
Sbjct: 530 IHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLAT 589

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            + L KQIH   +K    +D ++++ ++D+Y + G+M ++  +FE     D  TW+AMI 
Sbjct: 590 -VELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC 648

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY-AMKSGFE 524
            Y        A++LF  M     + +     + ++AC  +  + +G  +H +  M+S + 
Sbjct: 649 AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG--LHYFREMRSHYG 706

Query: 525 LDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           LD  +   S ++D+  + G + +A  +   +P   DDV W T++  C   G  ++A
Sbjct: 707 LDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVA 762



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 188/407 (46%), Gaps = 33/407 (8%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           T + T + + +  S+L + ++  KQ H        V   FVS  L+  YC+  ++  A  
Sbjct: 36  TKKLTFSHIFQKCSNL-KAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFN 94

Query: 448 LFENKDGFDLATWNAMIFGY--------------------ILSNNS-----------HKA 476
           +F+     D+ +WN MIFGY                    ++S NS            K+
Sbjct: 95  VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           +E+F+ M     + D  T A  +KAC  +     G Q+H  A++ GF+ D+   + ++DM
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y  C  +  A +IF ++P  + V W+ +I+G V N      L +Y  M   G+   + TF
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATF 274

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           A   ++ + L+A E G Q+HA  +K +   D  VG + +DMYAKC  + DA  +F     
Sbjct: 275 ASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPN 334

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
                 NA++VG A+     E L++F  ++   ++ D ++  G L+ACS      E  + 
Sbjct: 335 PTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ- 393

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
            H +  K G++  +   + ++D   + G   EA  +   M  + + S
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS 440



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++       L  G   H R++ S    D F+ + ++ MY +CG LV A ++ +++ +R
Sbjct: 478 SVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEER 537

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             +SWNSI++ +  S E   EN       F  + +        T A +L +C +   V  
Sbjct: 538 TTVSWNSIISGF--SSEKQGEN---ALSYFSRMLQVGVIPDNFTYATVLDICANLATVEL 592

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  LK+ L  D +++  +V++YSK G +++++ +F+   +RD V W  M+ AYA 
Sbjct: 593 GKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAY 652

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G GE+   LF ++    + P+      VL   + +G
Sbjct: 653 HGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG 689


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 255/882 (28%), Positives = 419/882 (47%), Gaps = 120/882 (13%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
           T T R T   LL+ C     +  ++ +H   ++ G+  D F+S  L+N+Y K   + +A 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD-------------- 260
            +F  M  RDV+ W  ++  YA+ GF ++ F LF ++  +G  P+               
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 261 --ESVQCVLGVISDLGKRHEEQVQ-------------AYAIKLLLYNNNSNVVLWNKKLS 305
             E+ + +   I   G + + +VQ               A ++    +  +VV +N  L 
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            Y Q       +  F  M    +  D VT++  L A      L+ G++IH  T++ G  S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 366 AVIVGNSLINMYSKMGCVC----------------------------------------- 384
            + VG +L+ M  + G V                                          
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 385 --GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             G+  ++ T  S+L A S+  + L   K IH H  ++   +D  +  ALI +Y R G +
Sbjct: 323 SDGVALNRTTYLSILNACST-SKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A  LF      DL +WNA+I GY    +  +A+ L+  M + G +   +T    + AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
                   GK +H   ++SG + +  +++ +++MY +CG++++AQ++F    A D ++W 
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +MI+G   +G  + A  ++ +M+   + PD  TFA ++       ALE G+QIH  + + 
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               D  +G +L++MY +CG+++DA  +F  +  R+ + W AM+ G A  G   + ++LF
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621

Query: 683 EDMKAHGVE-PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
             M+  G   PD  TF  +LSAC++ GLV E Y+ F  M  +YG+ P +EHY  LV  LG
Sbjct: 622 WQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 681

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RA R +EA  LI  MPF   A++   LLGACR+ G+    +  A   + L   + + Y+L
Sbjct: 682 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADL-------IFAK 838
           LSN++AAA +WDDV   R  M+ + ++K+P                AD        I+A+
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAE 801

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           ++ L   ++E GY PDT  VL D+ +  +E +L  HSE+LA AYGLI TPP + I     
Sbjct: 802 LKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKN 861

Query: 894 ----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                           L  +E +   +NRFH  ++G C C D
Sbjct: 862 LRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCED 903



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 131/573 (22%), Positives = 227/573 (39%), Gaps = 104/573 (18%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F Q S    S     + ++L    + S L  GK  H   +      D  +   L+TM  R
Sbjct: 217 FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG +  A++ F  + DRD++ +N+++AA A  G        E F  +  +R      +R 
Sbjct: 277 CGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHN-----VEAFEQYYRMRSDGVALNRT 331

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L  C +S  + A + +H +  + G   D  +  AL+++Y++ G + +A+ LF  M
Sbjct: 332 TYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM 391

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GK 275
            +RD++ W  ++  YA      E   L+  +   G+ P   +   +L   ++      GK
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451

Query: 276 RHEEQVQAYAIK---------LLLY---------------NNNSNVVLWNKKLSGYLQVG 311
              E +    IK         + +Y                   +V+ WN  ++G+ Q G
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A + F  M    ++ D++TF   L+     + L LG+QIHG   +SG    V +GN
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           +LINMY +    CG   D   +                      H++++    D    TA
Sbjct: 572 ALINMYIR----CGSLQDARNV---------------------FHSLQH---RDVMSWTA 603

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL-----ELFSHMHTS 486
           +I      G   +A  LF           +   F  ILS  +H  L     ++FS M + 
Sbjct: 604 MIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMES- 662

Query: 487 GERLDEITIATAVKACGCLL-MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
                E  +   ++  GCL+ +L + ++                               +
Sbjct: 663 -----EYGVLPTIEHYGCLVGLLGRARRFQ-----------------------------E 688

Query: 546 AQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLA 577
           A+++ N +P P D A W T++  C  +G   LA
Sbjct: 689 AETLINQMPFPPDAAVWETLLGACRIHGNIALA 721


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 238/722 (32%), Positives = 372/722 (51%), Gaps = 90/722 (12%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL      +N + +     GY +    H A+   + + +   + +   F   L  +  
Sbjct: 89  ASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVS 148

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------------- 381
            D  +L   +H    K G ++   VG +LI+ YS  G                       
Sbjct: 149 MDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGM 208

Query: 382 -------C-------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                  C             + G + + FT++  L++   L E  ++ K +H  A+K  
Sbjct: 209 VACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGL-EAFNVGKSVHGCALKGC 267

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D FV  AL+++Y ++G + +A+ LFE     DL  W+ MI  Y  S+ S +AL+LF 
Sbjct: 268 YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFL 327

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M  +    +  T A+ ++AC   + L  GKQ+H+  +K G   ++ VS+ I+D+Y KCG
Sbjct: 328 RMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCG 387

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            + ++  +F ++P  +DV W T+I G V  G+ + A++++  M    + P E T++ +++
Sbjct: 388 EIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLR 447

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           AS+ L ALE G QIH+  IK   + D  V  SL+DMYAKCG I DA + F +M+ R+ V 
Sbjct: 448 ASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVS 507

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WNAM+ G + HG   E L LF+ M+    +P+ +TF+GVLSACS  GL+ +   +F  M 
Sbjct: 508 WNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMS 567

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
           + Y I+P +EHY+ +V  LGR GR  EA +LI  + ++ S  + RALLGAC +    + G
Sbjct: 568 KDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLG 627

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------- 832
           +  A+ ++ +EP D + +VLLSN++A A +WD+V   R  M++K V+K+P          
Sbjct: 628 RVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGV 687

Query: 833 --------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                          LI A +E L K+ ++ GYVPD + VLLDV+++EKER L+ HSE+L
Sbjct: 688 VHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERL 747

Query: 879 ARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
           A AYGLI TP S  I                     +  +E +    NRFHH R G+C C
Sbjct: 748 ALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSC 807

Query: 916 AD 917
            D
Sbjct: 808 GD 809



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 274/609 (44%), Gaps = 91/609 (14%)

Query: 49  SSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           S+  S  +  +L+  I   +D + GK  H  IL      D F  N L+  Y +  SL  A
Sbjct: 30  SALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDA 89

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK 167
            +LFD+MP  + IS+ ++   Y+   + + + +    R+F+   E   F        LLK
Sbjct: 90  SKLFDEMPQTNTISFVTLAQGYSRDHQFH-QALHFILRIFKEGHEVNPF----VFTTLLK 144

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           L +S        T+H    K+G   D FV  AL++ YS  G +  A+ +FD +  +D+V 
Sbjct: 145 LLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVS 204

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV----QCVLGVIS-DLGKRHEEQVQ 282
           W  M+  YAEN F EE   LF  +   G  P++ ++    +  LG+ + ++GK     V 
Sbjct: 205 WTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGK----SVH 260

Query: 283 AYAIK-------------LLLYNNN---------------SNVVLWNKKLSGYLQVGDNH 314
             A+K             L LY  +               ++++ W+  ++ Y Q   + 
Sbjct: 261 GCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSK 320

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            A++ F+ M +++V  ++ TF   L A A + +L+LG+QIH   LK G  S V V N+++
Sbjct: 321 EALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIM 380

Query: 375 NMYSKMG----------------------CVCG---------------------LRTDQF 391
           ++Y+K G                       + G                     ++  + 
Sbjct: 381 DVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEV 440

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T +SVLRAS+SL   L    QIH   IK     D+ V+ +LID+Y + G + +A   F+ 
Sbjct: 441 TYSSVLRASASLA-ALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDK 499

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
            +  D  +WNAMI GY +   S +AL LF  M  +  + +++T    + AC    +L +G
Sbjct: 500 MNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG 559

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            Q H  +M   +++  C+      +++  + G   +A  +  +I   P  + W  ++  C
Sbjct: 560 -QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGAC 618

Query: 569 VDNGEEDLA 577
           V + + DL 
Sbjct: 619 VIHKKVDLG 627



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 2/369 (0%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H H +K  T  D F    L++ Y ++ S+ +A  LF+     +  ++  +  GY   
Sbjct: 55  KHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRD 114

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           +  H+AL     +   G  ++     T +K    + +      +HA   K G   D  V 
Sbjct: 115 HQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVG 174

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++D Y   G +  A+ +F+DI   D V+WT M++   +N   + +L +++QMR+ G  
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P+ FT +  +K+   L A   G+ +H   +K     D FVGI+L+++YAK G I DA  L
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL 294

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F++M   + + W+ M+   AQ    +E L LF  M+   V P++ TF  VL AC+ + + 
Sbjct: 295 FEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA-SSVS 353

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            +  +  H    K+G+   V   + ++D   + G  + + +L   +P     + +  ++G
Sbjct: 354 LDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVG 413

Query: 771 ACRVQGDTE 779
             ++ GD E
Sbjct: 414 YVQL-GDGE 421



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 5/242 (2%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FL+    S   ++  + S+L+   S+  L LGK  H+ +L      + F++N +M +Y++
Sbjct: 326 FLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAK 385

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG +  + +LF+++PDR+ ++WN+I+  Y   G+G          LF  + E     + +
Sbjct: 386 CGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGE-----RAMNLFTHMLEHDMQPTEV 440

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T + +L+   S   +     +H   +K     D  V+ +L+++Y+K G+I +A+  FD M
Sbjct: 441 TYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKM 500

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            +RD V W  M+  Y+ +G   E  +LF  +  +   P+  +   VL   S+ G  ++ Q
Sbjct: 501 NKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ 560

Query: 281 VQ 282
             
Sbjct: 561 AH 562



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 13/253 (5%)

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GK +H + +K G  LDL   + +L+ YV+  ++ DA  +F+++P  + +++ T+  G   
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           + +   AL    ++   G   + F F  L+K    +        +HA + KL   +D FV
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +L+D Y+  GN++ A  +F  +  ++ V W  M+   A++   EE+L+LF  M+  G 
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG--IEPEVEHYSF----LVDALGRAG 744
           +P++ T  G L +C   GL     E F++ +  +G  ++   +H  F    L++   ++G
Sbjct: 234 KPNNFTISGALKSC--LGL-----EAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSG 286

Query: 745 RTKEAGELILSMP 757
              +A  L   MP
Sbjct: 287 EIIDAQRLFEEMP 299


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/582 (38%), Positives = 340/582 (58%), Gaps = 48/582 (8%)

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           + G R + FT+++ L++ + L E   + K +H  A+K     D +V  AL+++Y ++G +
Sbjct: 198 IMGYRPNNFTISAALKSCNGL-EAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEI 256

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKA 501
           AEA+  FE     DL  W+ MI  Y  S+ S +ALELF  M  S   + +  T A+ ++A
Sbjct: 257 AEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQA 316

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L++L  G Q+H+  +K G + ++ VS+ ++D+Y KCG + ++  +F      ++VAW
Sbjct: 317 CASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAW 376

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            T+I G V  G+ + AL+++  M    + P E T++ +++AS+ L ALE GRQIH+  IK
Sbjct: 377 NTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIK 436

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
              + D  V  SL+DMYAKCG I+DA + F +MD ++ V WNA++ G + HG G E L L
Sbjct: 437 TMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNL 496

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F+ M+    +P+ +TF+GVLSACS  GL+ +   +F  M + YGIEP +EHY+ +V  LG
Sbjct: 497 FDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLG 556

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           R+G+  EA +LI  +PF+ S  + RALLGAC +  + + GK  A++++ +EP D + +VL
Sbjct: 557 RSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVL 616

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LSN++A A +WD+V   R  MK+K VKK+P                         LIFA 
Sbjct: 617 LSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAM 676

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           +E L K+ ++ GYVPD   VLLDVE++EKER L+ HSE+LA A+GLI  P    I     
Sbjct: 677 LEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKN 736

Query: 894 ----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                           +  +E +    NRFHH R G+C C D
Sbjct: 737 LRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGD 778



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 161/607 (26%), Positives = 260/607 (42%), Gaps = 95/607 (15%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + ++L+ AI   D   GKS H  IL      D F  N L+  Y   G L  A +LFD
Sbjct: 3   SHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFD 62

Query: 113 KMPDRDLISWNSILAAYAHSGE------GNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           +MP  + +S+ ++   ++ S +             EG+ +           ++     LL
Sbjct: 63  EMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEV-----------NQFVFTTLL 111

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           KL +S        +VH Y  K+G   D FV  AL++ YS  G +  A+ +FDG+  +D+V
Sbjct: 112 KLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMV 171

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYA 285
            W  M+  YAEN   E+   LF  +   G  P++ ++   L   + L   +  + V   A
Sbjct: 172 SWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCA 231

Query: 286 IK-------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAI 317
           +K             L LY  +  +               + W+  +S Y Q   +  A+
Sbjct: 232 LKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEAL 291

Query: 318 ECFVNMIRSNVQY-DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           E F  M +S+V   ++ TF   L A A    LNLG QIH   LK G  S V V N+L+++
Sbjct: 292 ELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDV 351

Query: 377 YSKMGCV-------------------------------------------CGLRTDQFTL 393
           Y+K G +                                             ++  + T 
Sbjct: 352 YAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTY 411

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           +SVLRAS+SL   L   +QIH   IK     DS V+ +LID+Y + G + +A   F+  D
Sbjct: 412 SSVLRASASLV-ALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMD 470

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D  +WNA+I GY +     +AL LF  M  S  + +++T    + AC    +L +G+ 
Sbjct: 471 KQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRA 530

Query: 514 MHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
            H  +M   + ++ C+      +++  + G   +A  +  +IP  P  + W  ++  CV 
Sbjct: 531 -HFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVI 589

Query: 571 NGEEDLA 577
           +   DL 
Sbjct: 590 HKNLDLG 596



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 185/383 (48%), Gaps = 3/383 (0%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H H +K+    D F    L++ Y   G + +A  LF+     +  ++  +  G+  S
Sbjct: 23  KSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS 82

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           +   +A  L   +   G  +++    T +K    + +      +HAY  K G + D  V 
Sbjct: 83  HQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVG 142

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++D Y  CG +  A+ +F+ I   D V+WT M++   +N   + +L ++ QMR+ G  
Sbjct: 143 TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYR 202

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P+ FT +  +K+ + L A + G+ +H   +K+    D +VGI+L+++Y K G I +A   
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF 262

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F++M   + + W+ M+   AQ    +E L+LF  M+    V P++ TF  VL AC+   L
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVL 322

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           ++      H    K G++  V   + L+D   + G  + + +L      +   + +  ++
Sbjct: 323 LNLG-NQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIV 381

Query: 770 GACRVQGDTETGKWVAEKLMALE 792
           G  ++ GD E    +   ++ L+
Sbjct: 382 GYVQL-GDGEKALNLFSNMLGLD 403



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 13/253 (5%)

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GK +H + +K G  LDL   + +L+ YV  G + DA  +F+++P  + V++ T+  G   
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           + +   A  +  ++   G   ++F F  L+K    +   +    +HA + KL   +D FV
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +L+D Y+ CGN++ A  +F  +  ++ V W  M+   A++   E++L LF  M+  G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS------FLVDALGRAG 744
            P++ T    L +C+  GL     E F + +  +G   +V +         L++   ++G
Sbjct: 202 RPNNFTISAALKSCN--GL-----EAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSG 254

Query: 745 RTKEAGELILSMP 757
              EA +    MP
Sbjct: 255 EIAEAQQFFEEMP 267


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 260/822 (31%), Positives = 402/822 (48%), Gaps = 132/822 (16%)

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   D   S   V  + K G++ +A+ LF+ M  ++ V   +M+  Y ++G      
Sbjct: 44  VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG------ 97

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
                                     +LG+         A KL         V W   + 
Sbjct: 98  --------------------------NLGE---------ARKLFDGMVERTAVTWTILIG 122

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY Q+     A E FV M R   + D VTF+  L+   G +  N   Q+    +K G+ S
Sbjct: 123 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDS 182

Query: 366 AVIVGNSLINMYSK---MGCVC-------------------------------------- 384
            +IVGN+L++ Y K   +   C                                      
Sbjct: 183 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQ 242

Query: 385 --GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             GL+  +FT A+VL A+  L + + L +QIH   IK + V + FVS AL+D Y ++ S+
Sbjct: 243 NSGLKPTEFTFAAVLCANIGL-DDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSV 301

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A  LF+     D  ++N +I GY        A +LF  +  +     +   AT +   
Sbjct: 302 IDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIA 361

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
              L  + G+Q+HA  + +  + ++ V + ++DMY KCG   +A+ IF ++     V WT
Sbjct: 362 SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWT 421

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            MIS  V  G  +  L ++++MR + V+ D+ TFA L++AS+ + +L  G+Q+H+ +IK 
Sbjct: 422 AMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 481

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              S+ F G +L+D+YAKCG+I+DA   F++M  RN V WNAM+   AQ+G  E TLK F
Sbjct: 482 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 541

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           ++M   G++PDSV+F+GVLSACS++GLV E   +F+ M + Y ++P  EHY+ +VD L R
Sbjct: 542 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCR 601

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF-DSSAYVL 801
           +GR  EA +L+  MP +    M  ++L ACR+  + E  +  A++L  +E   D++ YV 
Sbjct: 602 SGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN 661

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           +SNI+AAA QW++V+     M+ + VKK PA                       + I  K
Sbjct: 662 MSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKK 721

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           ++ L K ++E GY PDT   L + +E+ K  +L YHSE+LA A+ LISTP  S IL  K 
Sbjct: 722 IDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKN 781

Query: 899 PLY-----------------------ANRFHHLRDGMCPCAD 917
                                     + RFHH RDG C C D
Sbjct: 782 LRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGD 823



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 258/573 (45%), Gaps = 90/573 (15%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           TN +++ Y + G+L  AR+LFD M +R  ++W  ++  Y+   +       E F LF  +
Sbjct: 86  TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ-----FKEAFELFVQM 140

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE--FVSGALVNIYSKFG 208
           +   T    +T   LL  C  +G+   ++        I L +D    V   LV+ Y K  
Sbjct: 141 QRCGTEPDYVTFVTLLSGC--NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSN 198

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           ++  A  LF  M E D V +  M+  Y+++G  E+  +LFV++  SGL P + +   VL 
Sbjct: 199 RLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL- 257

Query: 269 VISDLGKRH---EEQVQAYAIK-------------LLLYNNNSNV--------------- 297
             +++G       +Q+ ++ IK             L  Y+ + +V               
Sbjct: 258 -CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 316

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V +N  +SGY   G +  A + F  +  +        F   L+  + T +  +G+QIH  
Sbjct: 317 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQ 376

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
           T+ +   S ++VGNSL++MY+K G                                    
Sbjct: 377 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 436

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                      +  DQ T AS+LRAS+S+   L L KQ+H   IK+  +++ F  +AL+D
Sbjct: 437 LQLFNKMRQASVIADQATFASLLRASASIA-SLSLGKQLHSFIIKSGFMSNVFSGSALLD 495

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           VY + GS+ +A   F+     ++ +WNAMI  Y  +  +   L+ F  M  SG + D ++
Sbjct: 496 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 555

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFND 552
               + AC    ++++G   H  +M   ++LD      + ++DM  + G   +A+ +  +
Sbjct: 556 FLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAE 614

Query: 553 IPA-PDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +P  PD++ W+++++ C  +  ++LA     Q+
Sbjct: 615 MPIDPDEIMWSSVLNACRIHKNQELARRAADQL 647



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 44/381 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L   I   D++LG+  H+ ++ ++ + + F++N L+  YS+  S++ AR+LFD+MP++
Sbjct: 255 AVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ 314

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +S+N I++ YA  G+         F LFR L+ +     +   A +L +  ++     
Sbjct: 315 DGVSYNVIISGYAWDGKHKY-----AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 369

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +      +  V  +LV++Y+K GK  EA+ +F  +  R  V W  M+ AY +
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 429

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN--- 293
            GF EE   LF  + ++ +  D  +   +L   + +      +Q+ ++ IK    +N   
Sbjct: 430 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 489

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                    + N+V WN  +S Y Q G+    ++ F  M+ S +
Sbjct: 490 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 549

Query: 329 QYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI---VGNSLINMYS 378
           Q DSV+FL  L+A +       G  + N   QI+    +   Y++V+     +   N   
Sbjct: 550 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 609

Query: 379 KMGCVCGLRTDQFTLASVLRA 399
           K+     +  D+   +SVL A
Sbjct: 610 KLMAEMPIDPDEIMWSSVLNA 630



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           I A ++K     D       V  + K G +  A  LF++M  +NTV  N M+ G  + GN
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             E  KLF+ M    VE  +VT+  ++   S      EA+E F  M ++ G EP+
Sbjct: 99  LGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQM-QRCGTEPD 148


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/582 (38%), Positives = 323/582 (55%), Gaps = 48/582 (8%)

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           +CG    QF  +S +RA +SL   + + KQ+H  A+K    ++ FV + L D+Y + G+M
Sbjct: 34  ICGEVPTQFAFSSAIRACASLGS-IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAM 92

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A  +FE     D  +W AMI GY       +AL  F  M      +D+  + + + AC
Sbjct: 93  FDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 152

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAW 561
           G L   K G+ +H+  +K GFE D+ V + + DMY K G M  A ++F  D    + V++
Sbjct: 153 GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSY 212

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T +I G V+  + +  LS++ ++R  G+ P+EFTF+ L+KA +   ALEQG Q+HA ++K
Sbjct: 213 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 272

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
           ++   DPFV   LVDMY KCG +E A   F ++     + WN+++    QHG G++ +K+
Sbjct: 273 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKI 332

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE M   GV+P+++TFI +L+ CS+ GLV E  + F+ M + YG+ P  EHYS ++D LG
Sbjct: 333 FERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 392

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAGR KEA E I  MPFE +A    + LGACR+ GD E GK  AEKL+ LEP +S A VL
Sbjct: 393 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVL 452

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LSNI+A   QW+DV S R  M+  NVKK P                          I+ K
Sbjct: 453 LSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEK 512

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           ++ L+ +IK  GYVP TD V LD+++  KE+ L+ HSE++A A+ LIS P    I+  K 
Sbjct: 513 LDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKN 572

Query: 899 PLYA-----------------------NRFHHLRDGMCPCAD 917
                                      +RFHH  DG C C D
Sbjct: 573 LRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGD 614



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 161/296 (54%), Gaps = 4/296 (1%)

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           +L +W AMI G   ++   +A+  F  M   GE   +   ++A++AC  L  ++ GKQMH
Sbjct: 5   NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 64

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
             A+K G   +L V S + DMY KCGAM DA  +F ++P  D+V+WT MI G    GE +
Sbjct: 65  CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 124

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            AL  + +M    V  D+      + A   L A + GR +H++++KL   SD FVG +L 
Sbjct: 125 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 184

Query: 636 DMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           DMY+K G++E A  +F    + RN V +  ++ G  +    E+ L +F +++  G+EP+ 
Sbjct: 185 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 244

Query: 695 VTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            TF  ++ AC+    + +  + +  +M+  +  +P V   S LVD  G+ G  ++A
Sbjct: 245 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 298



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 18/288 (6%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + V+WT MISG   N +   A+  +  MR+ G VP +F F+  ++A + L ++E G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +Q+H   +K    S+ FVG +L DMY+KCG + DA  +F++M  ++ V W AM+ G ++ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G  EE L  F+ M    V  D       L AC           + H    K G E ++  
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG-RSVHSSVVKLGFESDIFV 179

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK-------WVA 785
            + L D   +AG  + A  +     F   +     +   C + G  ET +       +V 
Sbjct: 180 GNALTDMYSKAGDMESASNV-----FGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE 234

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQ--WDDVTSARGEMKRKNVKKDP 831
            +   +EP   + +   S I A ANQ   +  T    ++ + N  +DP
Sbjct: 235 LRRQGIEP---NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDP 279



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 162/390 (41%), Gaps = 55/390 (14%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILRHAISTSDLLLGKST 75
           RNL S++  +    Q S FS +              +   + S +R   S   + +GK  
Sbjct: 4   RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 63

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H   L      + F+ +NL  MYS+CG++  A ++F++MP +D +SW +++  Y+  GE 
Sbjct: 64  HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE- 122

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E    F+ + +      +  L   L  C +        +VH   +K+G   D F
Sbjct: 123 ----FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 178

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           V  AL ++YSK G +  A  +F    E R+VV +  ++  Y E    E+   +FV+L R 
Sbjct: 179 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 255 GLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKL----------LLYN----------- 292
           G+ P++ +   ++   ++     +  Q+ A  +K+          +L +           
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 293 -------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-- 343
                   +   + WN  +S + Q G    AI+ F  M+   V+ +++TF+  L   +  
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 344 -----GTDNLNLGQQIHGTTLKSGFYSAVI 368
                G D      + +G       YS VI
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 388



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 103/500 (20%), Positives = 189/500 (37%), Gaps = 104/500 (20%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP R+L+SW +++     SG       +E  R F  +R      ++   +  ++ C S G
Sbjct: 1   MPQRNLVSWTAMI-----SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 55

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   + +H  ALK G+  + FV   L ++YSK G + +A  +F+ M  +D V W  M+ 
Sbjct: 56  SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 115

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKL 288
            Y++ G  EE    F  +    +  D   +   LG    L     G+     V     + 
Sbjct: 116 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 175

Query: 289 LLYNNNS-------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            ++  N+                         NVV +   + GY++       +  FV +
Sbjct: 176 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 235

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            R  ++ +  TF   + A A    L  G Q+H   +K  F     V + L++MY K    
Sbjct: 236 RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK---- 291

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           CGL      L   ++A   + +   ++                    +L+ V+ ++G   
Sbjct: 292 CGL------LEQAIQAFDEIGDPTEIA------------------WNSLVSVFGQHGLGK 327

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATA 498
           +A  +FE      +   NA+ F  +L+  SH     + L+ F  M  +            
Sbjct: 328 DAIKIFERMVDRGVKP-NAITFISLLTGCSHAGLVEEGLDYFYSMDKT------------ 374

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APD 557
                             Y +  G E   CV    +D+  + G + +A+   N +P  P+
Sbjct: 375 ------------------YGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMPFEPN 412

Query: 558 DVAWTTMISGCVDNGEEDLA 577
              W + +  C  +G++++ 
Sbjct: 413 AFGWCSFLGACRIHGDKEMG 432



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 6/235 (2%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           D Y  +  F  +LL F +      +       S L    +      G+S H+ ++     
Sbjct: 115 DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 174

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGF 144
            D F+ N L  MYS+ G +  A  +F    + R+++S+  ++  Y  +     E + +G 
Sbjct: 175 SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVET-----EQIEKGL 229

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            +F  LR      +  T + L+K C +   +     +H   +KI    D FVS  LV++Y
Sbjct: 230 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 289

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
            K G + +A   FD + +   + W  ++  + ++G G++   +F  +   G+ P+
Sbjct: 290 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPN 344


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/585 (38%), Positives = 328/585 (56%), Gaps = 46/585 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGA--IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
           +N +V+ WN  ++GY Q G    +  +E F  M   N+  ++ TF     A +   ++  
Sbjct: 70  HNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFF 129

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR----------------------- 387
           GQQ H   +K   +  V VG+SL+NMY K G +   R                       
Sbjct: 130 GQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAI 189

Query: 388 --------------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                                ++F   SVL A + +PE +   KQIH  A+K   +    
Sbjct: 190 QRLAGEAFEVFELMRREEEDVNEFAFTSVLSALA-VPEFVDSGKQIHCLAVKTGLLVFLS 248

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  AL+ +Y + GS+ ++  +FE  +  +  TW+AMI GY  S +SHKAL+LFS MH +G
Sbjct: 249 ILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAG 308

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
               E T+   + AC     +++GKQ+H Y +K GFE  L + + ++DMY K G   DA+
Sbjct: 309 INPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDAR 368

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
             FN +  PD V WT+MI+G V NGE + ALS+Y +M++ G++P+E T A ++KA S L 
Sbjct: 369 KGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLA 428

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A +QGRQIHA  IK     +  +G +L  MYAKCGN+E+  I+F++M  R+ + WNAM+ 
Sbjct: 429 AFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMIS 488

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GL+Q+G G+E L+LFE+M+    +PD VTF+ VLSACS+ GLV   +  F +M +++G+ 
Sbjct: 489 GLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLL 548

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P+VEHY+ +VD L RAG+  EA E I S   +    + R LLGACR   + E G +  EK
Sbjct: 549 PKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEK 608

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           LM L   +SSAYVLLS I+ A  + +DV   R  MK + V K+P 
Sbjct: 609 LMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPG 653



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 237/535 (44%), Gaps = 91/535 (17%)

Query: 57  FSILRHAISTSDLLLGKSTHARILN-SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           F+ L        L  G++ HA+I+  +S     +L N+L+  Y++C  L  A+ +FD++ 
Sbjct: 11  FNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIH 70

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS---LRESITFTSRLTLAPLLKLCLSS 172
           ++D+ISWN ++  Y+  G   +  V E F+  R+   L  + TF+   T A  L      
Sbjct: 71  NKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLS----- 125

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             ++  +  H  A+K+   +D FV  +L+N+Y K G + EA+ +FD M ER+ V W  M+
Sbjct: 126 -SIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMI 184

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK 287
             YA      E F +F  + R     ++ +   VL  ++     D GK    Q+   A+K
Sbjct: 185 SGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGK----QIHCLAVK 240

Query: 288 --LLLY--------------------------NNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
             LL++                          +N+ N + W+  ++GY Q GD+H A++ 
Sbjct: 241 TGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKL 300

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  M  + +     T +  L A +    +  G+Q+H   LK GF S + +  +L++MY+K
Sbjct: 301 FSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAK 360

Query: 380 MGCV--------------------------------------C-----GLRTDQFTLASV 396
            G                                        C     G+  ++ T+ASV
Sbjct: 361 SGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASV 420

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L+A S+L       +QIH   IK     +  + +AL  +Y + G++ E   +F      D
Sbjct: 421 LKACSNLA-AFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERD 479

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
           + +WNAMI G   +    +ALELF  M     + D++T    + AC  + ++  G
Sbjct: 480 IISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG 534



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 176/348 (50%), Gaps = 4/348 (1%)

Query: 405 EGLHLSKQIHVHAIKNDTVADS-FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           + L   + +H   IK  + +   +++ +LI+ Y +   + +A+ +F+     D+ +WN +
Sbjct: 21  KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCL 80

Query: 464 IFGYILS--NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           I GY       S   +ELF  M       +  T +    A   L  +  G+Q HA A+K 
Sbjct: 81  INGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKM 140

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
               D+ V S +L+MY K G + +A+ +F+ +P  ++V W TMISG         A  ++
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVF 200

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
             MR      +EF F  ++ A +    ++ G+QIH   +K        +  +LV MYAKC
Sbjct: 201 ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKC 260

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+++D+  +F+  + +N++ W+AM+ G AQ G+  + LKLF  M   G+ P   T +GVL
Sbjct: 261 GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVL 320

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           +ACS    V E  +  H    K G E ++   + LVD   ++G T++A
Sbjct: 321 NACSDACAVEEG-KQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDA 367



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 174/380 (45%), Gaps = 35/380 (9%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFL 90
           P+ S  ++   Q+    +   ++  FS I   A + S +  G+  HA  +  +   D F+
Sbjct: 89  PTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFV 148

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            ++L+ MY + G L  AR +FD+MP+R+ ++W ++++ YA           E F +F  +
Sbjct: 149 GSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQ-----RLAGEAFEVFELM 203

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           R      +      +L       +V + + +H  A+K GL+    +  ALV +Y+K G +
Sbjct: 204 RREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSL 263

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
            ++  +F+   +++ + W  M+  YA++G   +   LF  +H +G+ P + ++  VL   
Sbjct: 264 DDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNAC 323

Query: 271 SDLGKRHE-EQVQAYAIKL----------------------------LLYNNNSNVVLWN 301
           SD     E +QV  Y +KL                              Y    ++VLW 
Sbjct: 324 SDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWT 383

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             ++GY+Q G+N  A+  +  M    +  + +T    L A +     + G+QIH  T+K 
Sbjct: 384 SMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKY 443

Query: 362 GFYSAVIVGNSLINMYSKMG 381
           G    V +G++L  MY+K G
Sbjct: 444 GLGLEVTIGSALSTMYAKCG 463



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 4/153 (2%)

Query: 608 ALEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           +L++GR +HA +IKL  SS   ++  SL++ YAKC ++  A ++F ++  ++ + WN ++
Sbjct: 22  SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLI 81

Query: 667 VGLAQHG--NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
            G +Q G       ++LF+ M+A  + P++ TF G+ +A S    +    +  H +  K 
Sbjct: 82  NGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFG-QQAHAVAIKM 140

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
               +V   S L++   +AG   EA E+   MP
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMP 173


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 262/835 (31%), Positives = 397/835 (47%), Gaps = 122/835 (14%)

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y K G + +A+ +FD M ER +  W  M+  Y  NG       ++ ++   G+  D  +
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 263 VQCVL---GVISDL--GKRHEEQVQAYAIKLLLYNNNS---------------------- 295
              +L   G++ DL  G         Y     ++  NS                      
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              +VV WN  +S Y   G    A+  F  M+++ V  ++ TF  AL A   +  + LG 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------------- 383
           QIH   LKSG    V V N+L+ MY + G +                             
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                           L+ DQ ++ S++ AS  L   L+  K+IH +AIKN   ++  V 
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLN-GKEIHAYAIKNGFDSNILVG 299

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             LID+Y +   M+     F+     DL +W     GY  +    +ALEL   +   G  
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   I + + AC  L  L + K++H Y ++ G   D  + + I+D+Y +CG +  A  I
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRI 418

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F  I   D V+WT+MIS  V NG  + AL ++  M+ +G+ PD  T   ++ A   L+ L
Sbjct: 419 FESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTL 478

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           ++G++IH  +I+     +  +  +LVDMYA+CG++EDAY +F     RN +LW AM+   
Sbjct: 479 KKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAY 538

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG GE  ++LF  MK   + PD +TF+ +L ACS++GLV+E      +M+ +Y +EP 
Sbjct: 539 GMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPW 598

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            EHY+ LVD LGR    +EA +++ SM  E +  +  ALLGACR+  + E G+  AEKL+
Sbjct: 599 PEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLL 658

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
            L+  +   YVL+SN+FAA  +W DV   R  MK   + K+P                  
Sbjct: 659 ELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRD 718

Query: 833 ------DLIFAKVEGLIKRIK-EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                 D I+ K+  + +++K EGGYV  T FVL +V EEEK + LY HSE+LA AYGL+
Sbjct: 719 KLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLL 778

Query: 886 STPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           +T   + I   K                           A+RFHH +DGMC C D
Sbjct: 779 ATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGD 833



 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 183/656 (27%), Positives = 312/656 (47%), Gaps = 84/656 (12%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CGS++ A  +FDKM +R + +WN+++  Y  +GE  A    E +R  R L   ++F
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGE--ALGALEMYREMRHL--GVSF 56

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            S  T   LLK C     ++    +HG A+K G     FV  +LV +Y+K   I  A+ L
Sbjct: 57  DS-YTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKL 115

Query: 217 FDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD--- 272
           FD M  R DVV W  ++ AY+ NG   E   LF ++ ++G+  +  +    L    D   
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175

Query: 273 --LGKRHEEQVQAYAIKLLLYNNNS------------------------NVVLWNKKLSG 306
             LG +    +      L +Y  N+                        ++V WN  L+G
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           ++Q G    A+E F ++  ++++ D V+ +  + A      L  G++IH   +K+GF S 
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295

Query: 367 VIVGNSLINMYSKMGCVC------------------------------------------ 384
           ++VGN+LI+MY+K  C+                                           
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355

Query: 385 -GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G+  D   + S+L A   L   L   K+IH + I+   ++D  +   +IDVY   G + 
Sbjct: 356 EGMDVDATMIGSILLACRGL-NCLGKIKEIHGYTIRGG-LSDPVLQNTIIDVYGECGIID 413

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A  +FE+ +  D+ +W +MI  Y+ +  ++KALE+FS M  +G   D +T+ + + A  
Sbjct: 414 YAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVC 473

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  LK+GK++H + ++ GF L+  +S+ ++DMY +CG++ DA  IF      + + WT 
Sbjct: 474 SLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTA 533

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MIS    +G  + A+ ++ +M+   ++PD  TF  L+ A S    + +G+     ++K +
Sbjct: 534 MISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSF-LEIMKCE 592

Query: 624 CSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGE 676
              +P+      LVD+  +   +E+AY + K M    T  +W A+L     H N E
Sbjct: 593 YQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKE 648



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 154/610 (25%), Positives = 260/610 (42%), Gaps = 88/610 (14%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  + +  H   S  S  +  +L+      DL  G   H   +        F+ N+L+ 
Sbjct: 42  ALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVA 101

Query: 97  MYSRCGSLVYARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
           +Y++C  +  AR+LFD+M  R D++SWNSI++AY+ +G       TE   LF  + ++  
Sbjct: 102 LYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGM-----CTEALCLFSEMLKAGV 156

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
            T+  T A  L+ C  S ++     +H   LK G V D +V+ ALV +Y +FGK+ EA  
Sbjct: 157 VTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAV 216

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           +F  ++ +D+V W  ML  + +NG   E    F DL  + L PD  S+  ++     LG 
Sbjct: 217 IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGY 276

Query: 276 -RHEEQVQAYAIK------LLLYNN----------------------NSNVVLWNKKLSG 306
             + +++ AYAIK      +L+ N                       + +++ W    +G
Sbjct: 277 LLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAG 336

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q      A+E    +    +  D+      L A  G + L   ++IHG T++ G  S 
Sbjct: 337 YAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SD 395

Query: 367 VIVGNSLINMYSKMGCV------------------------------------------- 383
            ++ N++I++Y + G +                                           
Sbjct: 396 PVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKE 455

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            GL  D  TL S+L A  SL   L   K+IH   I+   + +  +S  L+D+Y R GS+ 
Sbjct: 456 TGLEPDYVTLVSILSAVCSLST-LKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVE 514

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A  +F      +L  W AMI  Y +      A+ELF  M       D IT    + AC 
Sbjct: 515 DAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDI---PAPDD 558
              ++ +GK      MK  ++L+      + ++D+  +   + +A  I   +   P P+ 
Sbjct: 575 HSGLVNEGKSFLE-IMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPE- 632

Query: 559 VAWTTMISGC 568
             W  ++  C
Sbjct: 633 -VWCALLGAC 641


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 260/838 (31%), Positives = 412/838 (49%), Gaps = 82/838 (9%)

Query: 68  DLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +L   K   A +L    +P D FLT +L++ YS  GS+  A +LFD +P  D++S N ++
Sbjct: 63  NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           + Y            E  R F  +       + ++   ++  C +      SE V  + +
Sbjct: 123 SGYKQH-----RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTI 177

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K+G  + E V  AL++++SK  +  +A  +F      +V  W  ++     N     VF 
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD 237

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------LLLYNN 293
           LF ++      PD  +   VL   + L K R  + VQA  IK            + LY  
Sbjct: 238 LFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                          N +VV W   LSGY +  D   A+E F  M  S V+ ++ T    
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------- 384
           ++A      +    Q+H    KSGFY    V  +LI+MYSK G +               
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQR 417

Query: 385 ------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         GLRTD+F++ S+L    S+ + L+L KQ+H
Sbjct: 418 QNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCLNLGKQVH 473

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            + +K+  V D  V ++L  +Y + GS+ E+  LF+     D A W +MI G+       
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A+ LFS M   G   DE T+A  +  C     L +GK++H Y +++G +  + + S ++
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +MY KCG++  A+ +++ +P  D V+ +++ISG   +G       ++  M +SG   D F
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
             + ++KA++       G Q+HA + K+   ++P VG SL+ MY+K G+I+D    F Q+
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
           +  + + W A++   AQHG   E L+++  MK  G +PD VTF+GVLSACS+ GLV E+Y
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
            + + M + YGIEPE  HY  +VDALGR+GR +EA   I +M  +  A +   LL AC++
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
            G+ E GK  A+K + LEP D+ AY+ LSNI A   +WD+V   R  MK   V+K+P 
Sbjct: 834 HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/603 (23%), Positives = 265/603 (43%), Gaps = 91/603 (15%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + S+L    S   L  GK   AR++      D F+   ++ +Y++CG +  A  +F 
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFS 309

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           ++P+  ++SW  +L+ Y  S +  +        +F+ +R S    +  T+  ++  C   
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFS-----ALEIFKEMRHSGVEINNCTVTSVISACGRP 364

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF---DGMQERDVVLWK 229
             V  +  VH +  K G   D  V+ AL+++YSK G I  ++ +F   D +Q +++V   
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--N 422

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--DLGKRHEEQVQAYAIK 287
           VM+ +++++    +   LF  + + GL  D+ SV  +L V+   +LGK    QV  Y +K
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGK----QVHGYTLK 478

Query: 288 -------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIEC 319
                          LY+   ++                 W   +SG+ + G    AI  
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  M+      D  T    L   +   +L  G++IHG TL++G    + +G++L+NMYSK
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598

Query: 380 MG-------------------------------------------CVCGLRTDQFTLASV 396
            G                                            + G   D F ++S+
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L+A ++L +   L  Q+H +  K     +  V ++L+ +Y + GS+ +    F   +G D
Sbjct: 659 LKA-AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-QMH 515
           L  W A+I  Y     +++AL++++ M   G + D++T    + AC    ++++    ++
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
           +     G E +      ++D   + G + +A+S  N++   PD + W T+++ C  +GE 
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837

Query: 575 DLA 577
           +L 
Sbjct: 838 ELG 840



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 5/230 (2%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           +S   S   ++L    S   L  GK  H   L +       L + L+ MYS+CGSL  AR
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           +++D++P+ D +S +S+++ Y+  G      + +GF LFR +  S        ++ +LK 
Sbjct: 607 QVYDRLPELDPVSCSSLISGYSQHGL-----IQDGFLLFRDMVMSGFTMDSFAISSILKA 661

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
              S        VH Y  KIGL  +  V  +L+ +YSKFG I +    F  +   D++ W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
             ++ +YA++G   E   ++  +   G  PD  +   VL   S  G   E
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEE 771


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 257/834 (30%), Positives = 427/834 (51%), Gaps = 99/834 (11%)

Query: 147 FRSLRESITFTSRLTLAPL------LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           F SLR++I+     T +PL      LK C+ SG +   + +H   +  GL  D  +  +L
Sbjct: 21  FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80

Query: 201 VNIYSKFGKIREAKFLFDGM--QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           + +YSK G    A  +F  M   +RD+V W  ++  +A N         F+ +       
Sbjct: 81  ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHM------- 133

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY---LQVG--DN 313
               +QC   +I             Y    LL  + SN + +   L+ +   L+ G  D+
Sbjct: 134 ----LQCSRNIIYP---------NEYCFTALL-RSCSNPLFFTTGLAIFAFLLKTGYFDS 179

Query: 314 HGAIEC-FVNMIRS---NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
           H  + C  ++M      ++Q   + F          D +   + +   TL    YS + +
Sbjct: 180 HVCVGCALIDMFTKGGLDIQSARMVF----------DKMQ-HKNLVTWTLMITRYSQLGL 228

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
            +  ++++ ++  V     D+FTL S+L A   L E   L KQ+H   I++   +D FV 
Sbjct: 229 LDDAVDLFCRL-LVSEYTPDKFTLTSLLSACVEL-EFFSLGKQLHSWVIRSGLASDVFVG 286

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             L+D+Y ++ ++  +  +F      ++ +W A+I GY+ S    +A++LF +M      
Sbjct: 287 CTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVT 346

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            +  T ++ +KAC  L     GKQ+H   +K G     CV + +++MY + G M  A+  
Sbjct: 347 PNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKA 406

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           FN +   + +++ T         + D + +  H++  +GV    FT+A L+  ++C+  +
Sbjct: 407 FNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTI 464

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
            +G QIHA ++K    ++  +  +L+ MY+KCGN E A  +F  M  RN + W +++ G 
Sbjct: 465 VKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGF 524

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           A+HG   + L+LF +M   GV+P+ VT+I VLSACS+ GL+ EA+++F+ M   + I P 
Sbjct: 525 AKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPR 584

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +EHY+ +VD LGR+G   EA E I SMPF+A A + R  LG+CRV  +T+ G+  A+K++
Sbjct: 585 MEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKIL 644

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
             EP D + Y+LLSN++A+  +WDDV + R  MK+K + K+                   
Sbjct: 645 EREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGD 704

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                A  I+ +++ L  +IK  GY+P+TDFVL DVE+E+KE+ L+ HSEK+A AY LIS
Sbjct: 705 TSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALIS 764

Query: 887 TP-PSSV--------------------ILSNKEPLY--ANRFHHLRDGMCPCAD 917
           TP P  +                    I++ +E +   ANRFHH++DG C C D
Sbjct: 765 TPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCND 818



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 261/590 (44%), Gaps = 87/590 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP--D 116
           +L+  I + +L LGK  H ++++S    D  L N+L+T+YS+CG    A  +F  M    
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RDL+SW++I++ +A++   +   +T  F        +I + +      LL+ C +  +  
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLT--FLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 177 ASETVHGYALKIGLVWDEFVSG-ALVNIYSKFG-KIREAKFLFDGMQERDVVLWKVMLRA 234
               +  + LK G        G AL+++++K G  I+ A+ +FD MQ +++V W +M+  
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQV-------- 281
           Y++ G  ++   LF  L  S   PD  ++  +L    +L     GK+    V        
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 282 --------QAYAIKLLLYNNNS--------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                     YA    + N+          NV+ W   +SGY+Q      AI+ F NM+ 
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
            +V  +  TF   L A A   +  +G+Q+HG T+K G  +   VGNSLINMY++ G +  
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMEC 402

Query: 384 ---------------------------------------CGLRTDQFTLASVLRASSSLP 404
                                                   G+    FT A +L  ++ + 
Sbjct: 403 ARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIG 462

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             +   +QIH   +K+    +  ++ ALI +Y + G+   A  +F +    ++ TW ++I
Sbjct: 463 TIVK-GEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSII 521

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML----KQGKQMH-AYAM 519
            G+     + KALELF  M   G + +E+T    + AC  + ++    K    MH  +++
Sbjct: 522 SGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSI 581

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
               E   C    ++D+  + G +++A    N +P   D + W T +  C
Sbjct: 582 SPRMEHYAC----MVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSC 627



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 7/217 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   S  D  +GK  H + +         + N+L+ MY+R G++  AR+ F+ + ++
Sbjct: 354 SVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEK 413

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +LIS+N+       + + NA+ +         +  +    S  T A LL      G +  
Sbjct: 414 NLISYNT-------AADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVK 466

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H   +K G   +  ++ AL+++YSK G    A  +F+ M  R+V+ W  ++  +A+
Sbjct: 467 GEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAK 526

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +GF  +   LF ++   G+ P++ +   VL   S +G
Sbjct: 527 HGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 145/315 (46%), Gaps = 36/315 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   +      LGK  H+ ++ S    D F+   L+ MY++  ++  +R++F+ M   
Sbjct: 253 SLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHH 312

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW ++++ Y  S +       E  +LF ++       +  T + +LK C S      
Sbjct: 313 NVMSWTALISGYVQSRQEQ-----EAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGI 367

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  +K+GL     V  +L+N+Y++ G +  A+  F+ + E++++ +     A A+
Sbjct: 368 GKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAK 427

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------- 287
               +E F+  V+   +G+     +  C+L   + +G   + EQ+ A  +K         
Sbjct: 428 ALDSDESFNHEVE--HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCI 485

Query: 288 -----------------LLLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                            L ++N+    NV+ W   +SG+ + G    A+E F  M+   V
Sbjct: 486 NNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGV 545

Query: 329 QYDSVTFLVALAAVA 343
           + + VT++  L+A +
Sbjct: 546 KPNEVTYIAVLSACS 560



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 14/204 (6%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           H    +S   +  +L  A     ++ G+  HA I+ S    +  + N L++MYS+CG+  
Sbjct: 441 HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKE 500

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
            A ++F+ M  R++I+W SI++ +A  G       T+   LF  + E     + +T   +
Sbjct: 501 AALQVFNDMGYRNVITWTSIISGFAKHGFA-----TKALELFYEMLEIGVKPNEVTYIAV 555

Query: 166 LKLCLSSGYV---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ- 221
           L  C   G +   W       Y   I    + +    +V++  + G + EA    + M  
Sbjct: 556 LSACSHVGLIDEAWKHFNSMHYNHSISPRMEHY--ACMVDLLGRSGLLLEAIEFINSMPF 613

Query: 222 ERDVVLWKVML---RAYAENGFGE 242
           + D ++W+  L   R +     GE
Sbjct: 614 DADALVWRTFLGSCRVHRNTKLGE 637


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/585 (37%), Positives = 327/585 (55%), Gaps = 46/585 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGD--NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            N +VV WN  ++GY Q G       +E F  M   N   +  TF     A + +     
Sbjct: 72  TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------------- 388
           G Q H   +K+  +  V VG+SLINMY K+GC+   R                       
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191

Query: 389 ---------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                                D+F   SVL A + +P+ +H  KQIH  A+KN  ++ + 
Sbjct: 192 ERMAFEAWELFXLMRREEGAHDKFIYTSVLSALT-VPDLVHYGKQIHCLALKNGLLSIAS 250

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  AL+ +Y + G + +A   FE     D  TW+AMI GY  + +SH+AL LF +MH +G
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            +  E T    + AC  +  L++GKQ+H Y++K+G+E  +   + ++DMY KCG++VDA+
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDAR 370

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
             F+ +  PD V WT+MISG   NGE + AL++Y +M++  ++P E T A +++A S L 
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           ALEQG+QIHA  IK   S +  +G +L  MYAKCG++ED  ++F++M  R+ + WNAM+ 
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GL+Q+G G + L+LFE+++    +PD VTF+ VLSACS+ GLV      F +M +++GI 
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P VEHY+ +VD L RAG+  E  E I S   +    + R LLGACR   + E G +  EK
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           LM L   +SSAY+LLS+I+ A  + DDV   R  MK + V K+P 
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPG 655



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 236/527 (44%), Gaps = 78/527 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L       DL  GK+ HA++L +      +LTN+L+ +Y++CGS+V A+ +F+ + ++D
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SWN ++  Y+  G      V E   LF+ +R   T  +  T + +     SS   +  
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVME---LFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
              H  A+K    +D FV  +L+N+Y K G + +A+ +FD + ER+ V W  ++  YA  
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--DLGKRHEEQVQAYAIK--------- 287
               E + LF  + R     D      VL  ++  DL   + +Q+   A+K         
Sbjct: 193 RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDL-VHYGKQIHCLALKNGLLSIASV 251

Query: 288 ----LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               + +Y               + + + + W+  ++GY Q GD+H A+  F NM  +  
Sbjct: 252 GNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           +    TF+  + A +    L  G+QIHG +LK+G+   +    +L++MY+K G +   R 
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARK 371

Query: 389 D-------------------------------------------QFTLASVLRASSSLPE 405
                                                       + T+ASVLRA SSL  
Sbjct: 372 GFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA- 430

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   KQIH   IK     +  + +AL  +Y + GS+ +   +F      D+ TWNAMI 
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           G   +    KALELF  +     + D +T    + AC  + ++++GK
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 537



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 3/345 (0%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L   K IH   ++  + +  +++ +L+++Y + GS+ +A+ +FE+    D+ +WN +I G
Sbjct: 26  LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLING 85

Query: 467 YILSNNSHKA--LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
           Y        +  +ELF  M       +  T +    A         G Q HA A+K+   
Sbjct: 86  YSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNF 145

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D+ V S +++MY K G M+DA+ +F+ IP  + V+W T+ISG         A  ++  M
Sbjct: 146 YDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLM 205

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           R      D+F +  ++ A +    +  G+QIH   +K    S   VG +LV MY KCG +
Sbjct: 206 RREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCL 265

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           +DA   F+    ++ + W+AM+ G AQ G+  E L LF +M  +G +P   TF+GV++AC
Sbjct: 266 DDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINAC 325

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           S  G + E  +  H    K G E ++   + LVD   + G   +A
Sbjct: 326 SDIGALEEG-KQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 2/124 (1%)

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M L  + P   +F  L+   +    L++G+ IHA L++    S  ++  SLV++YAKCG+
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET--LKLFEDMKAHGVEPDSVTFIGVL 701
           I  A ++F+ +  ++ V WN ++ G +Q G    +  ++LF+ M+A    P+  TF GV 
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 702 SACS 705
           +A S
Sbjct: 121 TAAS 124


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 245/792 (30%), Positives = 405/792 (51%), Gaps = 126/792 (15%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           ++ +H + +K     + F+   LV+ Y+KF +I  A+ +FD M +R++  W  +L +Y++
Sbjct: 28  TKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSK 87

Query: 238 NGF---GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
                  E VFH                                                
Sbjct: 88  LACLPEMERVFHAM--------------------------------------------PT 103

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS---NVQYDSVTFLVALAAVAGTDNLNLG 351
            ++V WN  +S Y   G    +++ +  M+ +   N+   +++ ++ LA+  G   ++LG
Sbjct: 104 RDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGC--VHLG 161

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
            Q+HG  +K GF S V VG+ L++MYSK G V   R          +A   +PE      
Sbjct: 162 LQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCAR----------QAFDEMPE------ 205

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
                  KN  + ++ ++  +     R   + ++  LF +    D  +W AMI G+  + 
Sbjct: 206 -------KNVVMYNTLIAGLM-----RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +A++LF  M      +D+ T  + + ACG ++ L++GKQ+HAY +++ ++ ++ V S
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY KC ++  A+++F  +   + V+WT M+ G   NG  + A+ I+  M+ +G+ P
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEP 373

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D+FT   ++ + + L +LE+G Q H   +     S   V  +LV +Y KCG+IED++ LF
Sbjct: 374 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLF 433

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   + V W A++ G AQ G   ETL+LFE M AHG +PD VTFIGVLSACS  GLV 
Sbjct: 434 SEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQ 493

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           +  + F  M +++ I P  +HY+ ++D   RAGR +EA + I  MPF   A    +LL +
Sbjct: 494 KGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSS 553

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR   + E GKW AE L+ LEP ++++Y+LLS+I+AA  +W++V + R  M+ K ++K+P
Sbjct: 554 CRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEP 613

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  +D I++++E L  ++ + GYVPD + VL DV++ EK 
Sbjct: 614 GCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKI 673

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
           + L +HSEKLA A+GLI  PP   I                     ++ +E L   A RF
Sbjct: 674 KMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARF 733

Query: 906 HHLRDGMCPCAD 917
           H  +DG C C D
Sbjct: 734 HLFKDGRCSCGD 745



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 143/614 (23%), Positives = 237/614 (38%), Gaps = 158/614 (25%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
            F+S S S+ +  +L+H   T      K  H  I+ + + P+ FL NNL++ Y++   + 
Sbjct: 8   QFNSMSLSNHYCELLKHCRDT------KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRIT 61

Query: 106 YARRLFDKMPDRDLISWNSILAAY-----------------------------AHSGEGN 136
           YARR+FD+MP R+L SWN++L++Y                             A++G G 
Sbjct: 62  YARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGF 121

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
                + + L   L       +R+ L+ +L L    G V     VHG+ +K G     FV
Sbjct: 122 LLQSVKAYNLM--LYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFV 179

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVL----------------------------- 227
              LV++YSK G +  A+  FD M E++VV+                             
Sbjct: 180 GSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDS 239

Query: 228 --WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAY 284
             W  M+  + +NG   E   LF ++    L  D  +   VL     +    E +QV AY
Sbjct: 240 ISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAY 299

Query: 285 AIK----------------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
            I+                            +    N  NVV W   L GY Q G +  A
Sbjct: 300 IIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEA 359

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           ++ F +M  + ++ D  T    +++ A   +L  G Q H   L SG  S + V N+L+ +
Sbjct: 360 VKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTL 419

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           Y K    CG   D   L S +                        +  D    TAL+  Y
Sbjct: 420 YGK----CGSIEDSHRLFSEM------------------------SYVDEVSWTALVSGY 451

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + G   E                                L LF  M   G + D++T  
Sbjct: 452 AQFGKANE-------------------------------TLRLFESMLAHGFKPDKVTFI 480

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS-SGILDMYVKCGAMVDAQSIFNDIP- 554
             + AC    ++++G Q+    +K    + +    + ++D++ + G + +A+   N +P 
Sbjct: 481 GVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPF 540

Query: 555 APDDVAWTTMISGC 568
           +PD + W +++S C
Sbjct: 541 SPDAIGWASLLSSC 554


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 237/714 (33%), Positives = 369/714 (51%), Gaps = 90/714 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +SN  + +  ++ Y++      A + +  M  ++ + D+      L A     +  LGQ+
Sbjct: 86  SSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQE 145

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR--------TDQFTLASVLRA---SSS 402
           +HG  +K+GF+  V V N+LI MYS++G +   R         D  + ++++R+   S  
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205

Query: 403 LPEG-------------------------------LHLSKQIHVHAIKNDTVADSFVS-- 429
           L E                                L L K +H + ++N     S V   
Sbjct: 206 LDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLC 265

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TALID+Y +  ++A A  +F+      + +W AMI  YI  NN ++ + LF  M   G  
Sbjct: 266 TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF 325

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            +EIT+ + VK CG    L+ GK +HA+ +++GF L L +++  +DMY KCG +  A+S+
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSV 385

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+   + D + W+ MIS    N   D A  I+  M   G+ P+E T   L+   +   +L
Sbjct: 386 FDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSL 445

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           E G+ IH+ + K     D  +  S VDMYA CG+I+ A+ LF +   R+  +WNAM+ G 
Sbjct: 446 EMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGF 505

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           A HG+GE  L+LFE+M+A GV P+ +TFIG L ACS++GL+ E    FH M  ++G  P+
Sbjct: 506 AMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPK 565

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           VEHY  +VD LGRAG   EA ELI SMP   + ++  + L AC++  + + G+W A++ +
Sbjct: 566 VEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFL 625

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
           +LEP  S   VL+SNI+A+AN+W DV   R  MK + + K+P                  
Sbjct: 626 SLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGD 685

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                A  ++  ++ + +++++ GY PD   VL ++++E+K  AL YHSEKLA AYGLIS
Sbjct: 686 REHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLIS 745

Query: 887 TPPSSVILSNKE---------------PLYA--------NRFHHLRDGMCPCAD 917
           T P   I   K                 +Y         NRFHH ++G C C D
Sbjct: 746 TAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCD 799



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 217/477 (45%), Gaps = 39/477 (8%)

Query: 347 NLNLGQQIHGTTLKS--------------GFYSAVIVGNSLINMYSKMGCVC-------- 384
           NLN  QQ+HG  +K+               + S   + + LI  Y K  C          
Sbjct: 55  NLNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAY 114

Query: 385 ----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
                   D F + SVL+A   +P  L L +++H   +KN    D FV  ALI +Y   G
Sbjct: 115 MRGTDTEVDNFVIPSVLKACCLIPSFL-LGQEVHGFVVKNGFHGDVFVCNALIMMYSEVG 173

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           S+A A  LF+  +  D+ +W+ MI  Y  S    +AL+L   MH    +  EI + +   
Sbjct: 174 SLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITH 233

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI------LDMYVKCGAMVDAQSIFNDIP 554
               L  LK GK MHAY M++G     C  SG+      +DMYVKC  +  A+ +F+ + 
Sbjct: 234 VLAELADLKLGKAMHAYVMRNG----KCGKSGVPLCTALIDMYVKCENLAYARRVFDGLS 289

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               ++WT MI+  +     +  + ++ +M   G+ P+E T   LVK      ALE G+ 
Sbjct: 290 KASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKL 349

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +HA  ++   +    +  + +DMY KCG++  A  +F     ++ ++W+AM+   AQ+  
Sbjct: 350 LHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNC 409

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            +E   +F  M   G+ P+  T + +L  C+  G + E  +  H   +K GI+ ++   +
Sbjct: 410 IDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSL-EMGKWIHSYIDKQGIKGDMILKT 468

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
             VD     G    A  L  +   +   SM  A++    + G  E    + E++ AL
Sbjct: 469 SFVDMYANCGDIDTAHRL-FAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 215/500 (43%), Gaps = 77/500 (15%)

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           +++  +R + T      +  +LK C         + VHG+ +K G   D FV  AL+ +Y
Sbjct: 110 KIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMY 169

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD---E 261
           S+ G +  A+ LFD ++ +DVV W  M+R+Y  +G  +E   L  D+H   + P +    
Sbjct: 170 SEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMI 229

Query: 262 SVQCVLGVISD--LGKRHEEQVQ--------------------------AYAIKLLLYNN 293
           S+  VL  ++D  LGK     V                           AYA ++    +
Sbjct: 230 SITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLS 289

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            ++++ W   ++ Y+   + +  +  FV M+   +  + +T L  +        L LG+ 
Sbjct: 290 KASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKL 349

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG-------------------------------C 382
           +H  TL++GF  ++++  + I+MY K G                               C
Sbjct: 350 LHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNC 409

Query: 383 V------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           +            CG+R ++ T+ S+L   +     L + K IH +  K     D  + T
Sbjct: 410 IDEAFDIFVHMTGCGIRPNERTMVSLLMICAK-AGSLEMGKWIHSYIDKQGIKGDMILKT 468

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           + +D+Y   G +  A  LF      D++ WNAMI G+ +  +   ALELF  M   G   
Sbjct: 469 SFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTP 528

Query: 491 DEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           ++IT   A+ AC    +L++GK++ H    + GF   +     ++D+  + G + +A  +
Sbjct: 529 NDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHEL 588

Query: 550 FNDIPA-PDDVAWTTMISGC 568
              +P  P+   + + ++ C
Sbjct: 589 IKSMPMRPNIAVFGSFLAAC 608



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 173/350 (49%), Gaps = 43/350 (12%)

Query: 67  SDLLLGKSTHARILNS-----SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           +DL LGK+ HA ++ +     S +P   L   L+ MY +C +L YARR+FD +    +IS
Sbjct: 239 ADLKLGKAMHAYVMRNGKCGKSGVP---LCTALIDMYVKCENLAYARRVFDGLSKASIIS 295

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           W +++AAY H       N+ EG RLF  +     F + +T+  L+K C ++G +   + +
Sbjct: 296 WTAMIAAYIH-----CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLL 350

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H + L+ G      ++ A +++Y K G +R A+ +FD  + +D+++W  M+ +YA+N   
Sbjct: 351 HAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCI 410

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK--------- 287
           +E F +FV +   G+ P++ ++  +L + +     ++GK     +    IK         
Sbjct: 411 DEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSF 470

Query: 288 LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
           + +Y N               + ++ +WN  +SG+   G    A+E F  M    V  + 
Sbjct: 471 VDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPND 530

Query: 333 VTFLVALAAVAGTDNLNLGQQI-HGTTLKSGFYSAVIVGNSLINMYSKMG 381
           +TF+ AL A + +  L  G+++ H    + GF   V     ++++  + G
Sbjct: 531 ITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAG 580



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 157/355 (44%), Gaps = 36/355 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+        LLG+  H  ++ +    D F+ N L+ MYS  GSL  AR LFDK+ ++
Sbjct: 129 SVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENK 188

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW++++ +Y  SG      + E   L R +       S + +  +  +      +  
Sbjct: 189 DVVSWSTMIRSYDRSGL-----LDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKL 243

Query: 178 SETVHGYALKIGLVWDEFVS--GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            + +H Y ++ G      V    AL+++Y K   +  A+ +FDG+ +  ++ W  M+ AY
Sbjct: 244 GKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAY 303

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGK-RHEEQVQ-AYAIKL 288
                  E   LFV +   G+ P++ ++     +C      +LGK  H   ++  + + L
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363

Query: 289 LLYN----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           +L                         + ++++W+  +S Y Q      A + FV+M   
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            ++ +  T +  L   A   +L +G+ IH    K G    +I+  S ++MY+  G
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCG 478


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 284/929 (30%), Positives = 434/929 (46%), Gaps = 169/929 (18%)

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           R G L  AR +FD MP RD+I+WNS++ AY ++G  +A          RSL ++I+  + 
Sbjct: 45  RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG---------RSLADAISGGNL 95

Query: 160 LTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
            T   LL     +G V  A     G  ++  + W+     A+V  Y + G I  A+ LFD
Sbjct: 96  RTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWN-----AMVTCYVQNGDITLARKLFD 150

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            M  RDV  W  ML  Y  +   EE  +LF                          +R  
Sbjct: 151 AMPSRDVSSWNTMLTGYCHSQLMEEARNLF--------------------------ERMP 184

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
           E+               N V W   +SGY+ +  +  A + F  M+   +  +    +  
Sbjct: 185 ER---------------NGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSV 229

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------MGCVCGLRT-D 389
           L+AV       + + IH    K+GF   V+VG +++N Y+K        +    G+   +
Sbjct: 230 LSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARN 289

Query: 390 QFTLASVLRASS------------------SLPE------GLHLSKQIHVHAIKNDTVAD 425
           ++T ++++ A S                  S+P       GL    +I    I  D + +
Sbjct: 290 EYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHE 349

Query: 426 SFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
             V +  A+I  Y +N  + EAE LF      +  +W  MI GY  +  S +AL     +
Sbjct: 350 PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQAL 409

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK---- 539
           H  G      ++ ++  AC  +  L+ GKQ+H+ A+K+G + +  V + ++ +Y K    
Sbjct: 410 HRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSI 469

Query: 540 ---------------------CGAMV------DAQSIFNDIPAPDDVAWTTMISGCVDNG 572
                                  A+V      +A+ +FN++P+PD V+WTT+IS C    
Sbjct: 470 GSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQAD 529

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           + + A+ I+  M     +P+     IL+  S  L A + G+QIH   IKL   S   V  
Sbjct: 530 QGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVAN 589

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +LV MY KC +  D+  +F  M+ R+   WN ++ G AQHG G E +++++ M + GV P
Sbjct: 590 ALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLP 648

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           + VTF+G+L ACS++GLV E ++ F  M   YG+ P +EHY+ +VD LGRAG  + A   
Sbjct: 649 NEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHF 708

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I  MP E  + +  ALLGAC++  + E G+  AEKL ++EP ++  YV+LSNI+++   W
Sbjct: 709 IYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMW 768

Query: 813 DDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEG 849
           D+V   R  MK + V KDP                          I+A +  L   +K  
Sbjct: 769 DEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKAT 828

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------------------- 889
           GYVPDTDFVL D++EE+KE +L YHSEKLA AYGL+ TP                     
Sbjct: 829 GYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFI 888

Query: 890 ---SSVILSNKEPLYANRFHHLRDGMCPC 915
              SSV     +    NRFHH R+G C C
Sbjct: 889 KFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 162/701 (23%), Positives = 291/701 (41%), Gaps = 90/701 (12%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS----- 132
           R+ +   + +    N ++T Y + G +  AR+LFD MP RD+ SWN++L  Y HS     
Sbjct: 116 RVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEE 175

Query: 133 --------GEGNA-------------ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
                    E N              E     + +FR++        +  L  +L     
Sbjct: 176 ARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRH 235

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKV 230
            G     E++H    K G   D  V  A++N Y+K    +  A   F+GM  R+   W  
Sbjct: 236 LGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWST 295

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGL--CPDDESVQCVL---GVISD----LGKRHEEQV 281
           ++ A ++ G  ++ F ++    R  L   P   S+   L   G I D      + HE  V
Sbjct: 296 IIAALSQAGRIDDAFAVY---QRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNV 352

Query: 282 QAYAIKLLLYNNNS---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
            ++   +  Y  N                N + W   ++GY + G +  A+     + R 
Sbjct: 353 VSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRK 412

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            +     +   +  A +  + L  G+Q+H   +K+G      V N+LI +Y K   +  +
Sbjct: 413 GMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSV 472

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R                        QI       DTV+ +   +AL+    +N    EA 
Sbjct: 473 R------------------------QIFDRMTVKDTVSYNSFMSALV----QNNLFDEAR 504

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F N    D+ +W  +I     ++  ++A+E+F  M    E  +   +   +   G L 
Sbjct: 505 DVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
             + G+Q+H  A+K G +  L V++ ++ MY KC +  D+  +F+ +   D   W T+I+
Sbjct: 565 APQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIIT 623

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G    A+ +Y  M  +GV+P+E TF  L+ A S    +++G Q   ++   D   
Sbjct: 624 GYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSS-DYGL 682

Query: 627 DPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFE 683
            P +     +VD+  + G+++ A      M +  ++V+W+A+L     H N E   +  E
Sbjct: 683 TPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAE 742

Query: 684 DMKAHGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREK 723
             K   +EP +   ++ + +  S  G+  E  +   LM+E+
Sbjct: 743 --KLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKER 781



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 114/520 (21%), Positives = 201/520 (38%), Gaps = 120/520 (23%)

Query: 60  LRHAISTSDLLLGKSTHARILNSS----QI--PDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           L+   S + +L G + + RI ++     QI  P+    N ++T Y +   +  A  LF++
Sbjct: 318 LKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNR 377

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP R+ ISW  ++A YA +G      V+      ++L       S  +L      C +  
Sbjct: 378 MPFRNTISWAGMIAGYARNGRSEQALVS-----LQALHRKGMLPSLSSLTSSFFACSNIE 432

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   + VH  A+K G  ++ +V  AL+ +Y K+  I   + +FD M  +D V +   + 
Sbjct: 433 ALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMS 492

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
           A  +N   +E   +F ++      PD                                  
Sbjct: 493 ALVQNNLFDEARDVFNNMP----SPD---------------------------------- 514

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLG 351
              VV W   +S   Q    + A+E F +M+  R       +T L+ L+   G     LG
Sbjct: 515 ---VVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAP--QLG 569

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           QQIH   +K G  S ++V N+L++MY K  C         + A  L+   S+ E      
Sbjct: 570 QQIHTIAIKLGMDSGLVVANALVSMYFK--C---------SSADSLKVFDSMEE------ 612

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
                        D F    +I  Y ++G   E                           
Sbjct: 613 ------------RDIFTWNTIITGYAQHGLGRE--------------------------- 633

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS- 530
               A+ ++  M ++G   +E+T    + AC    ++ +G Q    +M S + L   +  
Sbjct: 634 ----AIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFK-SMSSDYGLTPLLEH 688

Query: 531 -SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            + ++D+  + G +  A+    D+P  PD V W+ ++  C
Sbjct: 689 YACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC 728


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/713 (33%), Positives = 356/713 (49%), Gaps = 90/713 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N  VV WN  ++GY Q+G    A   F  M+   ++   +TFL+ L A +    L LG++
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKE 183

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT------------------------- 388
            H   +K GF S   +G +L++MY K G + G R                          
Sbjct: 184 FHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGD 243

Query: 389 ------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                             ++ +  S+L   S+ PE L   K +H   +    V D  V+T
Sbjct: 244 GEKAFQLFYRMQQEGFKPNRISFLSILDGCST-PEALAWGKAVHAQCMNTGLVDDVRVAT 302

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ALI +Y   GS+  A  +F+     D+ +W  MI GY  ++N   A  LF+ M   G + 
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQP 362

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D IT    + AC     L   +++H+  +++GF  DL V + ++ MY KCGA+ DA+ +F
Sbjct: 363 DRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVF 422

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   D V+W+ MI   V+NG  + A   +H M+ + V PD  T+  L+ A   L AL+
Sbjct: 423 DAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALD 482

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G +I+   IK D  S   VG +L++M  K G+IE A  +F+ M  R+ V WN M+ G +
Sbjct: 483 LGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYS 542

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HGN  E L LF+ M      P+SVTF+GVLSACS  G V E    F  + +  GI P +
Sbjct: 543 LHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTM 602

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           E Y  +VD LGRAG   EA  LI  MP + ++S+   LL ACR+ G+ +  +  AE+ + 
Sbjct: 603 ELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLM 662

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD-------------------- 830
            EP+D + YV LS+++AAA  W++V   R  M+ + V+K+                    
Sbjct: 663 SEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDR 722

Query: 831 ---PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               A  I+A++  L+  IK  GY+P T  VL +V E+EKE A+ YHSEKLA AYG++S 
Sbjct: 723 SHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSL 782

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P  + I                     ++ +E +   A+RFHH ++G+C C D
Sbjct: 783 PSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGD 835



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 283/605 (46%), Gaps = 82/605 (13%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           S+   S  +  + +  +   D  LGK     I+ S +  + +  N L+ ++S CG+++ A
Sbjct: 56  SNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEA 115

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK 167
           R+ FD + ++ +++WN+I+A YA  G     +V E F LFR + +     S +T   +L 
Sbjct: 116 RQTFDSVENKTVVTWNAIIAGYAQLG-----HVKEAFALFRQMVDEAMEPSIITFLIVLD 170

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
            C S   +   +  H   +K+G V D  +  ALV++Y K G +  A+ +FDG+ +RDV  
Sbjct: 171 ACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVST 230

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES---------------------VQCV 266
           + VM+  YA++G GE+ F LF  + + G  P+  S                      QC+
Sbjct: 231 FNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCM 290

Query: 267 -LGVISDLGKRHEEQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
             G++ D+ +     ++ Y        A ++       +VV W   + GY +  +   A 
Sbjct: 291 NTGLVDDV-RVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAF 349

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  M    +Q D +T++  + A A + +L+L ++IH   +++GF + ++V  +L++MY
Sbjct: 350 GLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMY 409

Query: 378 SKMGCV-----------------------------CG--------------LRTDQFTLA 394
           +K G +                             CG              +  D  T  
Sbjct: 410 AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           ++L A   L   L L  +I+  AIK D V+   V  ALI++  ++GS+  A Y+FEN   
Sbjct: 470 NLLNACGHLG-ALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQ 528

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            D+ TWN MI GY L  N+ +AL+LF  M     R + +T    + AC     +++G++ 
Sbjct: 529 RDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRF 588

Query: 515 HAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
            +Y +   G    + +   ++D+  + G + +A+ + N +P  P+   W+T+++ C   G
Sbjct: 589 FSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYG 648

Query: 573 EEDLA 577
             D+A
Sbjct: 649 NLDVA 653



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 123/226 (54%), Gaps = 3/226 (1%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQ---GKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           +H  GE  + I   T VK     +ML+    GKQ+  + ++SG +L++   + ++ ++  
Sbjct: 49  LHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSI 108

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG M++A+  F+ +     V W  +I+G    G    A +++ QM    + P   TF I+
Sbjct: 109 CGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIV 168

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A S    L+ G++ HA +IK+   SD  +G +LV MY K G+++ A  +F  +  R+ 
Sbjct: 169 LDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDV 228

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
             +N M+ G A+ G+GE+  +LF  M+  G +P+ ++F+ +L  CS
Sbjct: 229 STFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 263/825 (31%), Positives = 402/825 (48%), Gaps = 160/825 (19%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           +++H   +K GL    F+   L+N Y+K G I +A  +FD M  + V  W ++L  YA+ 
Sbjct: 33  KSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKG 92

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
           G  EE   +F ++      P+ +SV                                   
Sbjct: 93  GRLEEAHRVFEEM------PEPDSVS---------------------------------- 112

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W   + GY Q+G    AI  F  M+  +V     T    LA+ A  + L +G+++H   
Sbjct: 113 -WTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFV 171

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV-----LRASSSLPEGLHLSKQI 413
           +K G  S + V NSL+NMY+K G       D  T   V     L+++SS           
Sbjct: 172 VKHGLSSYISVANSLLNMYAKSG-------DPVTAKIVFDRMKLKSTSSW---------- 214

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                  +T+  S + + L+D+         A+  FE     D+ +WNAMI GY      
Sbjct: 215 -------NTMISSHMQSGLVDL---------AQVQFEQMIERDVVSWNAMISGYNQHGFD 258

Query: 474 HKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE-------- 524
            +AL++FS M   S  + D+ T+A+A+ AC  L  LK GKQ+HA+ +++ F+        
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318

Query: 525 -------------------------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
                                    LD+   + +LD YVK G +  A+ IF+ +   D V
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           AWT MI G V NG    A+ ++  M   G  P+ +T A ++  SS L +L+ GRQIHA+ 
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEET 678
            +   +S   V  +L+ MYAK G+I DA  +F  +   R+T+ W +M++ LAQHG GEE 
Sbjct: 439 TRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEA 498

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L LFE M  +G++PD +T++GVLSAC++ GLV +    ++LM+  + I P   HY+ ++D
Sbjct: 499 LTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMID 558

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
             GRAG  +EA   I +MP E       +LL +C+V  + E  +  AE+L+ +EP +S A
Sbjct: 559 LFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGA 618

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLI 835
           Y  L+N+++A  QW++  + R  MK K VKKD                         D I
Sbjct: 619 YSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAI 678

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-- 893
           +  +  + K IK+ G+VPDT+ VL D+EEE KE+ L +HSEKLA A+GLI TP ++ +  
Sbjct: 679 YEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRI 738

Query: 894 -------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                              L  +E +   A RFHH ++G+C C D
Sbjct: 739 MKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRD 783



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 149/656 (22%), Positives = 262/656 (39%), Gaps = 192/656 (29%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +S S  + S L+ ++   D   GKS HARI+ +      FL NNLM  Y++ G +  A R
Sbjct: 10  TSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHR 69

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE--SITFT---------- 157
           +FD+MP + + SWN IL+ YA  G      + E  R+F  + E  S+++T          
Sbjct: 70  VFDEMPVKSVFSWNIILSGYAKGGR-----LEEAHRVFEEMPEPDSVSWTAMIVGYNQMG 124

Query: 158 -------------------SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
                              ++ TL  +L  C +   +     VH + +K GL     V+ 
Sbjct: 125 QFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVAN 184

Query: 199 ALVNIYSKFGKIREAKFLFDGMQ-------------------------------ERDVVL 227
           +L+N+Y+K G    AK +FD M+                               ERDVV 
Sbjct: 185 SLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVS 244

Query: 228 WKVMLRAYAENGFGEEVFHLFVD-LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYA 285
           W  M+  Y ++GF  E   +F   L  S   PD  ++   L   ++L   +  +Q+ A+ 
Sbjct: 245 WNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHI 304

Query: 286 IK-------------LLLYN-----------------NNSNVVLWNKKLSGYLQVGD--- 312
           I+             + +Y+                 +N +V+ +   L GY+++GD   
Sbjct: 305 IRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINP 364

Query: 313 ----------------------------NHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                                       N  A+E F +MI+   + ++ T    L+  + 
Sbjct: 365 ARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSS 424

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
             +L+ G+QIH +  +SG  S+V V N+LI MY+K G +   R   F L           
Sbjct: 425 LASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARW-VFNL----------- 472

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             +H  +             D+   T++I    ++G   EA                   
Sbjct: 473 --IHWKR-------------DTITWTSMIIALAQHGLGEEA------------------- 498

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
                       L LF  M  +G + D IT    + AC  + +++QG+  +   M++  +
Sbjct: 499 ------------LTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNL-MQNAHK 545

Query: 525 LDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +    S  + ++D++ + G + +A +   ++P  PD +AW ++++ C  +   +LA
Sbjct: 546 IIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELA 601



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 38/313 (12%)

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA--------------- 555
           GK +HA  +K+G  L + + + +++ Y K G + DA  +F+++P                
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 556 ----------------PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
                           PD V+WT MI G    G+ + A+ ++ +M    V P +FT   +
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + + + +  L  GR++H+ ++K   SS   V  SL++MYAK G+   A I+F +M +++T
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
             WN M+    Q G  +     FE M    +E D V++  ++S  +  G   EA + F  
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQM----IERDVVSWNAMISGYNQHGFDREALDIFSK 267

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL---ILSMPFEASASMHRALLGACRVQG 776
           M      +P+    +  + A       K   ++   I+   F+   ++  AL+      G
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG 327

Query: 777 DTETGKWVAEKLM 789
             E  + + E+ M
Sbjct: 328 GVEIAQKIIEQSM 340



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 197/462 (42%), Gaps = 96/462 (20%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSL 150
           N +++ + + G +  A+  F++M +RD++SWN++++ Y   G        E   +F + L
Sbjct: 215 NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDR-----EALDIFSKML 269

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-----IGLVWDEFVS-------- 197
            +S +   + TLA  L  C +   +   + +H + ++      G V +  +S        
Sbjct: 270 MDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGV 329

Query: 198 --------------------GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
                                AL++ Y K G I  A+ +FD ++ RDVV W  M+  Y +
Sbjct: 330 EIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQ 389

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIKLLLYNNNSN 296
           NGF ++   LF  + + G  P++ ++  +L V S L    H  Q+ A A +     N S+
Sbjct: 390 NGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATR---SGNASS 446

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           V + N  ++ Y + G  + A   F N+I  + + D++T+   + A+A           HG
Sbjct: 447 VSVSNALITMYAKSGSINDARWVF-NLI--HWKRDTITWTSMIIALAQ----------HG 493

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                       +G   + ++ +M    G++ D  T   VL A + +  GL    + + +
Sbjct: 494 ------------LGEEALTLFERM-LENGIKPDHITYVGVLSACTHV--GLVEQGRSYYN 538

Query: 417 AIKNDTVADSFVSTA-----LIDVYCRNGSMAEAEYLFENKD-GFDLATWNAMIFGYILS 470
            ++N   A   + T      +ID++ R G + EA    EN     D+  W ++    + S
Sbjct: 539 LMQN---AHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSL----LAS 591

Query: 471 NNSHKALELFSHMHTSGERLDEI---------TIATAVKACG 503
              HK +EL      + ERL  I          +A    ACG
Sbjct: 592 CKVHKNVEL---AEVAAERLLLIEPENSGAYSALANVYSACG 630


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 275/931 (29%), Positives = 432/931 (46%), Gaps = 167/931 (17%)

Query: 99  SRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS 158
           +R G L  AR +FD MP RD+I+WNS+++AY +SG                         
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSG------------------------- 78

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
            L  A +L   +S G V  +                     L++ Y++ G++ +A+ +FD
Sbjct: 79  MLEDARILFDAISGGNVRTATI-------------------LLSGYARLGRVLDARRVFD 119

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           GM ER+ V W  M+  Y +NG       LF  +    +   +  V          G  H 
Sbjct: 120 GMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVT---------GYCHS 170

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
            Q+   A  L       N+V W   +SGY+++  +    + F  M       D   F   
Sbjct: 171 RQM-VDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASV 229

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL---------RTD 389
           L+AV G  +L + + +    LK+GF S V++G S++N+Y++      +           +
Sbjct: 230 LSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERN 289

Query: 390 QFTLASVLRASS------------------SLPE------GLHLSKQIHVHAIKNDTVAD 425
           ++T ++++ A S                  S+P       GL    +I    I  + + D
Sbjct: 290 EYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPD 349

Query: 426 SFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
             V +  A+I  Y +NG + EA+ LF+     +  +W  MI GY  +  S +AL+L   +
Sbjct: 350 PIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQAL 409

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC--- 540
           H +G      ++ ++  AC  +  L+ G+Q+H+ A+K+G + +  V + ++ MY KC   
Sbjct: 410 HRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNM 469

Query: 541 ----------------------GAMV------DAQSIFNDIPAPDDVAWTTMISGCVDNG 572
                                  A+V      DA+ IF+++ + D V+WTT+IS      
Sbjct: 470 EYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAE 529

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
             D A+  +  M      P+     IL+     L + + G+QIH   IK    S+  V  
Sbjct: 530 RGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVAN 589

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +L+ MY KCG   D++ +F  M+ R+   WN  + G AQHG G E +K++E M++ GV P
Sbjct: 590 ALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLP 648

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           + VTF+G+L+ACS+ GLV E ++ F  M   YG+ P +EHY+ +VD LGR G  + A + 
Sbjct: 649 NEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKF 708

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I  MP E    +  ALLGAC++  + E G+  AEKL   EP ++  YV+LSNI+++   W
Sbjct: 709 IYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMW 768

Query: 813 DDVTSARGEMKRKNVKKDP----------------ADLIFAKVE-------GLIKRIKEG 849
            +V   R  MK++ V K+P                 D    K+E        L   ++  
Sbjct: 769 VEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGT 828

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------------------- 889
           GYVPDT+FVL D++EE+KE +L YHSEKLA AYGL+ TP                     
Sbjct: 829 GYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFI 888

Query: 890 ---SSVILSNKEPLYANRFHHLRDGMCPCAD 917
              S V   + +    NRFHH R+G C C D
Sbjct: 889 KFVSHVTKRDIDIRDGNRFHHFRNGSCSCGD 919



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 171/726 (23%), Positives = 308/726 (42%), Gaps = 105/726 (14%)

Query: 69  LLLGKSTHARILNSSQI----PDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           LL G +   R+L++ ++    P+R     N +++ Y + G +  ARRLFD MP RD+ SW
Sbjct: 101 LLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSW 160

Query: 123 NSILAAYAH--------------------------SGEGNAENVTEGFRLFRSLRESITF 156
           NS++  Y H                          SG    E   +G+ +FR +      
Sbjct: 161 NSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGAS 220

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE-AKF 215
             +   A +L        +   E +    LK G   D  +  +++N+Y++     + A  
Sbjct: 221 PDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIK 280

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE--SVQCVLGVISDL 273
            FDGM ER+   W  M+ A +  G  +    ++      G  P     S   +L  ++  
Sbjct: 281 FFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GRDPVKSIPSQTALLTGLARC 334

Query: 274 GKRHEEQ----------VQAYAIKLLLYNNNS---------------NVVLWNKKLSGYL 308
           G+  E +          V ++   +  Y  N                N + W   ++GY 
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G +  A++    + R+ +     +   +  A +    L  G+Q+H   +K+G      
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY 454

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSF 427
           V N+LI+MY K  C                        +   +Q+       DTV+ +SF
Sbjct: 455 VCNALISMYGK--C----------------------RNMEYVRQVFNRMRVKDTVSWNSF 490

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           ++ AL+    +N  + +A ++F+N    D+ +W  +I  Y  +    +A+E F  M    
Sbjct: 491 IA-ALV----QNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEH 545

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           E+ +   +   +  CG L   K G+Q+H  A+K G + +L V++ ++ MY KCG   D+ 
Sbjct: 546 EKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSH 604

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +   D   W T I+GC  +G    A+ +Y  M   GV+P+E TF  L+ A S   
Sbjct: 605 KVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAG 664

Query: 608 ALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNA 664
            +++G Q   ++ + D    P +     +VD+  + G+++ A      M +  +TV+W+A
Sbjct: 665 LVDEGWQFFKSMSR-DYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSA 723

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREK 723
           +L     H N E   +  E  K    EP +   ++ + +  S  G+  E  E   +M+++
Sbjct: 724 LLGACKIHKNAEIGRRAAE--KLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQR 781

Query: 724 YGIEPE 729
            G+  E
Sbjct: 782 -GVSKE 786



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 160/409 (39%), Gaps = 86/409 (21%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F    H  +S   S + S+L       DL + +     +L +    D  +  +++ +Y+R
Sbjct: 211 FRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR 270

Query: 101 CGS-LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS- 158
             S L  A + FD M +R+  +W++++AA +H G  +A     G    +S+       + 
Sbjct: 271 DASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTG 330

Query: 159 -----RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                R+T A +L   +    V              + W+  ++G + N     G + EA
Sbjct: 331 LARCGRITEARILFEQIPDPIV--------------VSWNAMITGYMQN-----GMVDEA 371

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           K LFD M  R+ + W  M+  YA+NG  EE   L   LHR+G+ P   S+       S +
Sbjct: 372 KELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHI 431

Query: 274 GKRHE-EQVQAYAIK-------------LLLYNNNSNV---------------VLWNKKL 304
           G      QV + A+K             + +Y    N+               V WN  +
Sbjct: 432 GALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFI 491

Query: 305 -------------------------------SGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                          S Y Q      A+E F  M+  + + +S 
Sbjct: 492 AALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSP 551

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
              + L+   G  +  LGQQIH   +K G  S +IV N+L++MY K GC
Sbjct: 552 ILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC 600



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 39/215 (18%)

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE-ED-------- 575
           LD    S  +    + G + +A+ +F+ +P  D +AW +MIS   ++G  ED        
Sbjct: 31  LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI 90

Query: 576 ---------LALSIYHQM-------RLSGVVPDEFTFAILVKASSCLTA--LEQGRQIHA 617
                    + LS Y ++       R+   +P+  T A     S  +    +   R++  
Sbjct: 91  SGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFD 150

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG---LAQHGN 674
            +   D +S      S+V  Y     + DA+ LFKQM  RN V W  M+ G   + QHG 
Sbjct: 151 AMPSRDVTS----WNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGK 206

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           G +   +F  M   G  PD   F  VLSA   TGL
Sbjct: 207 GWD---IFRMMHHEGASPDQSNFASVLSAV--TGL 236


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 244/814 (29%), Positives = 394/814 (48%), Gaps = 135/814 (16%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           + +  L+N  SK G++ +A+ LFD M ++D   W  M+ +Y   G   E   LF      
Sbjct: 66  YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELF------ 119

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
                 +   C                              + + W+  +SGY + G   
Sbjct: 120 ------DGCSC-----------------------------KSSITWSSIISGYCKFGCKV 144

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            A + F +M     +    T    L   +    +  G+ IHG  +K+GF   V V   L+
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204

Query: 375 NMYSKMGCVC---------------------------------------------GLRTD 389
           +MY+K  CV                                              G+  +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECN 264

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           Q+T  ++L A SS+       +Q+H   +K+   ++ +V +AL+D+Y + G +  A+ + 
Sbjct: 265 QYTFPTILTACSSVLARC-FGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNML 323

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E  +  D+ +WN+++ G++      +AL LF +MH    ++D+ T  + +  C  ++   
Sbjct: 324 ETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSI 381

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
             K +H   +K+GFE    VS+ ++DMY K G M  A ++F  +   D ++WT++++G  
Sbjct: 382 NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYA 441

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N   + +L I+  MR++GV PD+F  A ++ A + LT LE G+Q+H + IK        
Sbjct: 442 QNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS 501

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           V  SLV MYAKCG ++DA  +F  M +++ + W A++VG AQ+G G  +LK ++ M + G
Sbjct: 502 VYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSG 561

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             PD +TFIG+L ACS+ GLV E  + F  M + YGI+P  EHY+ ++D  GR+G+  EA
Sbjct: 562 TRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEA 621

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            +L+  M  +  A++ ++LL ACRV  + E  +  A  L  LEP ++  YV+LSN+++A+
Sbjct: 622 KQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSAS 681

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
            +W+DV   R  MK K + K+P                          I+ K++ +I RI
Sbjct: 682 RKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRI 741

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----- 901
           KE GYVPD  F L D+++E KE  L YHSEKLA A+GL++ PPS+ I   K         
Sbjct: 742 KEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCH 801

Query: 902 ------------------ANRFHHLRDGMCPCAD 917
                             +N FHH R+G C C D
Sbjct: 802 SAMKYISRVFTRHIILRDSNCFHHFREGECSCGD 835



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 243/560 (43%), Gaps = 79/560 (14%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           DE+    +++ Y   G++ EA+ LFDG   +  + W  ++  Y + G   E F LF  + 
Sbjct: 95  DEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMR 154

Query: 253 RSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN------------------ 293
             G      ++  VL V S LG  +  E +  + +K     N                  
Sbjct: 155 LEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVS 214

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         N VLW   ++GY Q GD + A+E F  M    V+ +  TF   L A
Sbjct: 215 EAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTA 274

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------------- 384
            +       G+Q+HG  +KSGF S V V ++L++MY+K G +                  
Sbjct: 275 CSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW 334

Query: 385 --------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                      ++ D +T  SVL        G    K +H   I
Sbjct: 335 NSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVV---GSINPKSVHGLII 391

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           K        VS AL+D+Y + G M  A  +FE     D+ +W +++ GY  +N+  ++L+
Sbjct: 392 KTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLK 451

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           +F  M  +G   D+  +A+ + AC  L +L+ GKQ+H   +KSG      V + ++ MY 
Sbjct: 452 IFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYA 511

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG + DA +IF  +   D + WT +I G   NG+   +L  Y  M  SG  PD  TF  
Sbjct: 512 KCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIG 571

Query: 599 LVKASSCLTALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           L+ A S    +++GR+    + K+      P     ++D++ + G +++A  L  QMD++
Sbjct: 572 LLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVK 631

Query: 658 -NTVLWNAMLVGLAQHGNGE 676
            +  +W ++L     H N E
Sbjct: 632 PDATVWKSLLSACRVHENLE 651



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 229/550 (41%), Gaps = 111/550 (20%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP-D 116
           S+LR   S   +  G+  H  ++ +    + F+   L+ MY++C  +  A  LF  +  D
Sbjct: 167 SVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD 226

Query: 117 R-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           R + + W +++  YA +G+G      +    FR +       ++ T   +L  C S    
Sbjct: 227 RKNHVLWTAMVTGYAQNGDG-----YKAVEFFRYMHAQGVECNQYTFPTILTACSSVLAR 281

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              E VHG+ +K G   + +V  ALV++Y+K G ++ AK + + M++ DVV W  ++  +
Sbjct: 282 CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGF 341

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVIS------------------- 271
             +G  EE   LF ++H   +  DD +       CV+G I+                   
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLV 401

Query: 272 -----DLGKRHEEQVQAYAI--KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                D+  +  +   AY +  K+L      +V+ W   ++GY Q   +  +++ F +M 
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKML----EKDVISWTSLVTGYAQNNSHEESLKIFCDMR 457

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
            + V  D       L+A A    L  G+Q+H   +KSG   +  V NSL+ MY+K GC+ 
Sbjct: 458 VTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCL- 516

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
                                               D     FVS  + DV         
Sbjct: 517 ------------------------------------DDADAIFVSMQVKDV--------- 531

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
                         TW A+I GY  +     +L+ +  M +SG R D IT    + AC  
Sbjct: 532 -------------ITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSH 578

Query: 505 LLMLKQGK----QMH-AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDD 558
             ++ +G+    QM+  Y +K G E   C    ++D++ + G + +A+ + + +   PD 
Sbjct: 579 AGLVDEGRKYFQQMNKVYGIKPGPEHYAC----MIDLFGRSGKLDEAKQLLDQMDVKPDA 634

Query: 559 VAWTTMISGC 568
             W +++S C
Sbjct: 635 TVWKSLLSAC 644


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 240/714 (33%), Positives = 371/714 (51%), Gaps = 97/714 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +V  WN  +S Y++ G    AI+CF  ++  +  Q D  TF   L A      L  G++I
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKA---CQTLVDGRKI 194

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------ 384
           H    K GF   V V  SLI+MYS+ G V                               
Sbjct: 195 HCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 254

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G+  D  T+AS+L   + L + +  +  IH++ IK+    + FVS A
Sbjct: 255 AQALDVLDEMRLEGINMDSVTVASILPVCAQLGD-ISTATLIHLYVIKHGLEFELFVSNA 313

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI++Y + G++ +A+ +F+     D+ +WN++I  Y  +++   A   F  M  +G   D
Sbjct: 314 LINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPD 373

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILDMYVKCGAMVDAQSIF 550
            +T+ +           K  + +H + M+ G+ ++ + + + ++DMY K G +  A  +F
Sbjct: 374 LLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVF 433

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTAL 609
           N IP  D V+W T+ISG   NG    A+ +Y  M     +  ++ T+  ++ A + + AL
Sbjct: 434 NLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGAL 493

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           +QG +IH +LIK +   D FVG  L+D+Y KCG + DA  LF Q+   ++V WNA++   
Sbjct: 494 QQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCH 553

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG+GE+ LKLF +M+  GV+PD VTFI +LSACS++GLV E    FHLM+E YGI+P 
Sbjct: 554 GIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPS 612

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           ++HY  +VD LGRAG  + A + I  MP    AS+  ALLGACR+ G+ E GK+ +++L 
Sbjct: 613 LKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLF 672

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DL----- 834
            ++  +   YVLLSNI+A   +W+ V   R   + + +KK P           D+     
Sbjct: 673 EVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGN 732

Query: 835 --------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I+A++  L  ++K  GY+PD  FVL DVEE+EKE  L  HSE+LA A+G+IS
Sbjct: 733 QSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 792

Query: 887 TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           TPP S I                     ++ +E +   + RFHH ++G+C C D
Sbjct: 793 TPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGD 846



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/590 (25%), Positives = 261/590 (44%), Gaps = 87/590 (14%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S +  LL K  HA ++ S +I   F++  L+ +Y+  G +  +R  FD++  +D+ +WNS
Sbjct: 85  SCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNS 144

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL-TLAPLLKLCLSSGYVWASETVHG 183
           +++AY  +G     +  E    F  L     F +   T  P+LK C +   +     +H 
Sbjct: 145 MISAYVRNG-----HFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT---LVDGRKIHC 196

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           +  K+G  WD FV+ +L+++YS+FG +  A+ LFD M  RD+  W  M+    +NG   +
Sbjct: 197 WVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 256

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK----LLLYNNNS--- 295
              +  ++   G+  D  +V  +L V + LG       +  Y IK      L+ +N+   
Sbjct: 257 ALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALIN 316

Query: 296 ---------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                                +VV WN  ++ Y Q  D   A   F  M  + ++ D +T
Sbjct: 317 MYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT 376

Query: 335 FLVALAAVAG-TDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCV--------- 383
            LV+LA++A  + +    + +HG  ++ G+   AV++GN++++MY+K+G +         
Sbjct: 377 -LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNL 435

Query: 384 ----------------------------------CG-LRTDQFTLASVLRASSSLPEGLH 408
                                             C  ++ +Q T  S+L A + +   L 
Sbjct: 436 IPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVG-ALQ 494

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
              +IH H IK +   D FV T LID+Y + G + +A  LF          WNA+I  + 
Sbjct: 495 QGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHG 554

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           +  +  KAL+LF  M   G + D +T  + + AC    ++ +GK       + G +  L 
Sbjct: 555 IHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLK 614

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
               ++D+  + G +  A     D+P  PD   W  ++  C  +G  +L 
Sbjct: 615 HYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELG 664



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 162/295 (54%), Gaps = 4/295 (1%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L+K++H   + +  +  +F+S  L+++Y   G ++ +   F+     D+ TWN+MI  Y+
Sbjct: 91  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 469 LSNNSHKALELFSHMH-TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            + +  +A++ F  +   +  + D  T    +KAC  L+    G+++H +  K GF+ D+
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV---DGRKIHCWVFKLGFQWDV 207

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V++ ++ MY + G +  A+S+F+D+P  D  +W  MISG + NG    AL +  +MRL 
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+  D  T A ++   + L  +     IH  +IK     + FV  +L++MYAK GN+ DA
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
             +F+QM +R+ V WN+++    Q+ +       F  M+ +G+EPD +T + + S
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLAS 382



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL       D+      H  ++      + F++N L+ MY++ G+L  A+++F +M  R
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR 337

Query: 118 DLISWNSILAAYAHSGEGNAENVT-EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           D++SWNSI+AAY    E N + VT  GF  F  ++ +      LTL  L  +   S    
Sbjct: 338 DVVSWNSIIAAY----EQNDDPVTARGF--FFKMQLNGLEPDLLTLVSLASIAAQSRDYK 391

Query: 177 ASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            S +VHG+ ++ G + +  V G A++++Y+K G I  A  +F+ +  +DVV W  ++  Y
Sbjct: 392 NSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGY 451

Query: 236 AENGFGEEVFHLF 248
            +NG   E   ++
Sbjct: 452 TQNGLASEAIEVY 464



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 14/184 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SIL        L  G   H  ++ ++   D F+   L+ +Y +CG LV A  LF ++P
Sbjct: 480 WVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP 539

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               + WN+I++ +   G G      +  +LFR +++       +T   LL  C  SG V
Sbjct: 540 RESSVPWNAIISCHGIHGHGE-----KALKLFREMQDEGVKPDHVTFISLLSACSHSGLV 594

Query: 176 ----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKV 230
               W    +  Y +K  L       G +V++  + G +  A  F+ D     D  +W  
Sbjct: 595 DEGKWFFHLMQEYGIKPSLK----HYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGA 650

Query: 231 MLRA 234
           +L A
Sbjct: 651 LLGA 654


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 279/996 (28%), Positives = 452/996 (45%), Gaps = 137/996 (13%)

Query: 48   SSSSSSSQWFSILRHAISTSDLLLGKSTHARI----LNSSQIPDRFLTNNLMTMYSRCGS 103
            S++ +S    ++L    ++ DL +G+S HA I    L  +      + N ++ MY++CGS
Sbjct: 122  SAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGS 181

Query: 104  LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
            L  A  +F  +P++D++SW ++  AYA           +  R+FR +       + +T  
Sbjct: 182  LEDAIAVFLAIPEKDVVSWTAMAGAYAQ----ERRFYPDALRIFREMLLQPLAPNVITFI 237

Query: 164  PLLKLCLS-SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-- 220
              L  C S     W    +H    +  L +D   S AL+N+Y K G    A  +F  M  
Sbjct: 238  TALGACTSLRDGTWLHSLLH----EASLGFDPLASNALINMYGKCGDWEGAYSVFKAMAS 293

Query: 221  -QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----DLGK 275
             QE D+V W  M+ A  E G   +   +F  L   G+ P+  ++  +L  ++    D G 
Sbjct: 294  RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353

Query: 276  R---HEEQVQAYAIKLLLYNN------------------------NSNVVLWNKKLSGYL 308
                H    ++  ++ ++  N                          +V+ WN  L    
Sbjct: 354  ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASE 413

Query: 309  QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL-KSGFYSAV 367
                    +  F +M+ + +  + V+F+  L A + ++ L+ G++IH   L +   Y   
Sbjct: 414  DRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES 473

Query: 368  IVGNSLINMYSKMGCVC--------------GLRTDQFTLASVLRASSS----------- 402
             V   L++MY K G +                L T    L +  +   S           
Sbjct: 474  SVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533

Query: 403  ----LPEGLHLSK-----------QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                LP+ L  +            Q+    I       + + TALI ++ R   + +A  
Sbjct: 534  QGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARS 593

Query: 448  LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
            +F   D  D+ +W AM+     + +  +   LF  M   G   D+ T+AT +  C     
Sbjct: 594  VFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT 653

Query: 508  LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            L  GK +HA   + G E D+ V + +L+MY  CG   +A S F  + A D V+W  M + 
Sbjct: 654  LGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 568  CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
                G    A+ ++ QM+L GV PD+ TF+  +  S     +  G+  HA   +    SD
Sbjct: 714  YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSD 773

Query: 628  PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
              V   LV +YAKCG +++A  LF+       VL NA++  LAQHG  EE +K+F  M+ 
Sbjct: 774  VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 688  HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             GV PD  T + ++SAC + G+V E   +F  M+E +GI P +EHY+  VD LGRAG+ +
Sbjct: 834  EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 748  EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
             A ++I  MPFE +  +  +LLG C++QGD E G+  A++++ L+P +S+A+V+LSNI+ 
Sbjct: 894  HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 808  AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
            A  +W D    R +M  +NVK  P                        D I+  ++ L  
Sbjct: 954  ATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLEL 1013

Query: 845  RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----------- 893
             ++  GY  D     LDVE+E KE+AL YHSE++A A+GLI+TPP + +           
Sbjct: 1014 LMRRAGYEADKG---LDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGD 1070

Query: 894  ----------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                      +  +E +  +  RFHH  +G C C D
Sbjct: 1071 CHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKD 1106



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 207/782 (26%), Positives = 369/782 (47%), Gaps = 96/782 (12%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           ++ ++L+  + ++DL  GK  H  I N+      FL N L+ MY RCGSL  A  +F KM
Sbjct: 27  EYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKM 86

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSG 173
            +R+++SW ++++A A  G          F LFR+ L ES    +  TL  +L  C +S 
Sbjct: 87  EERNVVSWTALISANAQCGA-----FARAFALFRTMLLESSAAPNSYTLVAMLNACANSR 141

Query: 174 YVWASETVHGYALKIGL----VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            +    ++H    ++GL         V  A++N+Y+K G + +A  +F  + E+DVV W 
Sbjct: 142 DLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWT 201

Query: 230 VMLRAYA-ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR-------HEEQV 281
            M  AYA E  F  +   +F ++    L P+  +    LG  + L          HE  +
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASL 261

Query: 282 ---------------------QAYAI-KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                 AY++ K +      ++V WN  +S  ++ G +  A+  
Sbjct: 262 GFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTD-NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
           F  +    ++ +SVT +  L A+A +  +    +  HG   +SG+   V++GN++I+MY+
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYA 381

Query: 379 KMG---------------C-----------------------------VCGLRTDQFTLA 394
           K G               C                             + G+  ++ +  
Sbjct: 382 KCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFI 441

Query: 395 SVLRASSSLPEGLHLSKQIH--VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           ++L A S+  E L   ++IH  +   + D V +S V+T L+ +Y + GS++EAE +F+  
Sbjct: 442 AILNACSN-SEALDFGRKIHSLILTRRRDYV-ESSVATMLVSMYGKCGSISEAELVFKEM 499

Query: 453 --DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 L TWN M+  Y  ++ S +A      M   G   D ++  + + +C C    ++
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYC---SQE 556

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            + +    ++SG+    C+ + ++ M+ +C  +  A+S+FN++   D V+WT M+S   +
Sbjct: 557 AQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAE 615

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           N +     +++ +M+L GV+PD+FT A  +      T L  G+ IHA + ++   +D  V
Sbjct: 616 NRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAV 675

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +L++MY+ CG+  +A   F+ M  R+ V WN M    AQ G  +E + LF  M+  GV
Sbjct: 676 ENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGV 735

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +PD +TF   L+    + LVS+  + FH +  + G++ +V   + LV    + G+  EA 
Sbjct: 736 KPDKLTFSTTLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAM 794

Query: 751 EL 752
            L
Sbjct: 795 SL 796



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 8/161 (4%)

Query: 604 SCLTA--LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           SC+ +  L +G+  H  +         F+G  L++MY +CG++E+A+ +F +M+ RN V 
Sbjct: 34  SCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVS 93

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           W A++   AQ G       LF  M       P+S T + +L+AC+ +  ++    + H M
Sbjct: 94  WTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIG-RSIHAM 152

Query: 721 REKYGIEPEVEHYSFLVDAL----GRAGRTKEAGELILSMP 757
             + G+E      + + +A+     + G  ++A  + L++P
Sbjct: 153 IWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP 193


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 242/722 (33%), Positives = 361/722 (50%), Gaps = 90/722 (12%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL     + N V +   + GY Q      AI  F  +     + +   F   L  +  
Sbjct: 98  AAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVS 157

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------------- 381
            +   LG  +H    K GF S   VG +LI+ YS  G                       
Sbjct: 158 AEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGM 217

Query: 382 --------C------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                   C            + G + + FT ASVL+A   L E  ++ K +H  A K  
Sbjct: 218 VACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGL-EVFNVGKAVHGCAFKTS 276

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
            + + FV   LID+Y ++G + +A  +FE     D+  W+ MI  Y  S  S +A+E+F 
Sbjct: 277 YLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFC 336

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M       ++ T+A+ ++AC  L+ L+ G Q+H + +K G ++++ VS+ ++DMY KCG
Sbjct: 337 RMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCG 396

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            M ++  +F++ P   DV+W T+I G V  G  + AL ++  M    V   E T++ +++
Sbjct: 397 RMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLR 456

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A + + ALE G QIH+  +K     +  VG +L+DMYAKCGNI+DA ++F  +   + V 
Sbjct: 457 ACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVS 516

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WNAM+ G + HG   E LK FE M     +PD VTF+G+LSACS  GL+      F  M 
Sbjct: 517 WNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMV 576

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
           E+Y IEP  EHY+ +V  LGR+G   +A +L+  +PFE S  + RALL AC +  D E G
Sbjct: 577 EEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELG 636

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------- 832
           +  A++++ +EP D + +VLLSNI+A A +W +V S R  MKRK ++K+P          
Sbjct: 637 RISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGR 696

Query: 833 --------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                          LI   +E L  + +  GYVPD   VLLDVE+ +KE+ L+ HSE+L
Sbjct: 697 VHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERL 756

Query: 879 ARAYGLISTPP-----------------------SSVILSNKEPLYANRFHHLRDGMCPC 915
           A AYGLI TP                        S ++  +      NRFHH  +G+C C
Sbjct: 757 ALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSC 816

Query: 916 AD 917
            D
Sbjct: 817 GD 818



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 231/463 (49%), Gaps = 12/463 (2%)

Query: 316 AIECFVNMIRSN--VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            ++ F N I  N  V+YDS+       A    D +     +   TL  G YS  +  +  
Sbjct: 76  CLDLFANNILLNFYVKYDSLP-----DAAKLFDEMPDRNTVSFVTLIQG-YSQCLRFSEA 129

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I ++S++    G   + F  ++VL+   S  E   L   +H    K    +D+FV TALI
Sbjct: 130 IGLFSRLQGE-GHELNPFVFSTVLKLLVS-AEWAKLGFSVHACVYKLGFDSDAFVGTALI 187

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D Y   G    A  +F+  +  D+ +W  M+  Y+ +    ++L+LFS M   G + +  
Sbjct: 188 DCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNF 247

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T A+ +KAC  L +   GK +H  A K+ +  +L V   ++D+Y+K G + DA  +F ++
Sbjct: 248 TFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEM 307

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
           P  D + W+ MI+    + + + A+ ++ +MR   V+P++FT A L++A + L  L+ G 
Sbjct: 308 PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           QIH +++K+    + FV  +L+DMYAKCG +E++  LF +      V WN ++VG  Q G
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           NGE+ L LF+DM    V+   VT+  VL AC+    + E     H +  K   +      
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAAL-EPGSQIHSLSVKTIYDKNTVVG 486

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           + L+D   + G  K+A  L+  M  E       A++    V G
Sbjct: 487 NALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVHG 528



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 272/632 (43%), Gaps = 83/632 (13%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           + SH S   ++  + S+L+  I   D   GK  H  I+      D F  N L+  Y +  
Sbjct: 34  RTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYD 93

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           SL  A +LFD+MPDR+ +S+ +++  Y+          +E   LF  L+      +    
Sbjct: 94  SLPDAAKLFDEMPDRNTVSFVTLIQGYSQ-----CLRFSEAIGLFSRLQGEGHELNPFVF 148

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           + +LKL +S+ +     +VH    K+G   D FV  AL++ YS  G    A+ +FD ++ 
Sbjct: 149 STVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY 208

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV-----ISDLGKRH 277
           +D+V W  M+  Y EN   EE   LF  +   G  P++ +   VL       + ++GK  
Sbjct: 209 KDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAV 268

Query: 278 E----------------EQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
                            E +  Y        A+++       +V+ W+  ++ Y Q   +
Sbjct: 269 HGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQS 328

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             AIE F  M R  V  +  T    L A A   +L LG QIH   +K G    V V N+L
Sbjct: 329 EEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388

Query: 374 INMYSKMG--------------CV-----------------------------CGLRTDQ 390
           ++MY+K G              C                              C ++  +
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T +SVLRA + +   L    QIH  ++K     ++ V  ALID+Y + G++ +A  +F+
Sbjct: 449 VTYSSVLRACAGIA-ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFD 507

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D  +WNAMI GY +     +AL+ F  M  +  + D++T    + AC    +L +
Sbjct: 508 MLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDR 567

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIP-APDDVAWTTMISG 567
           G Q +  +M   ++++ C       +++  + G +  A  + ++IP  P  + W  ++S 
Sbjct: 568 G-QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSA 626

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CV + + +L   I  Q  L     DE T  +L
Sbjct: 627 CVIHNDVELG-RISAQRVLEIEPEDEATHVLL 657



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 24/405 (5%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H   IK     D F +  L++ Y +  S+ +A  LF+     +  ++  +I GY   
Sbjct: 64  KYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQC 123

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +A+ LFS +   G  L+    +T +K        K G  +HA   K GF+ D  V 
Sbjct: 124 LRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVG 183

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++D Y  CG    A+ +F+ I   D V+WT M++  V+N   + +L ++ +MR+ G  
Sbjct: 184 TALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFK 243

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P+ FTFA ++KA   L     G+ +H    K     + FVG+ L+D+Y K G+++DA  +
Sbjct: 244 PNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQV 303

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F++M   + + W+ M+   AQ    EE +++F  M+   V P+  T   +L AC+   LV
Sbjct: 304 FEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACA--SLV 361

Query: 711 SEAYEN-FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
                N  H    K G++  V   + L+D   + GR + + +L    P     S +  ++
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIV 421

Query: 770 G------------------ACRVQGDTETGKWVAEK---LMALEP 793
           G                   C+VQG   T   V      + ALEP
Sbjct: 422 GYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP 466



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 132/256 (51%), Gaps = 19/256 (7%)

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG--- 567
           GK +H   +K G  LDL  ++ +L+ YVK  ++ DA  +F+++P  + V++ T+I G   
Sbjct: 63  GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQ 122

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           C+   E   A+ ++ +++  G   + F F+ ++K        + G  +HA + KL   SD
Sbjct: 123 CLRFSE---AIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSD 179

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FVG +L+D Y+ CG  E A  +F  ++ ++ V W  M+    ++   EE+LKLF  M+ 
Sbjct: 180 AFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRI 239

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS------FLVDALG 741
            G +P++ TF  VL AC   GL     E F++ +  +G   +  +         L+D   
Sbjct: 240 VGFKPNNFTFASVLKAC--VGL-----EVFNVGKAVHGCAFKTSYLEELFVGVELIDLYI 292

Query: 742 RAGRTKEAGELILSMP 757
           ++G   +A ++   MP
Sbjct: 293 KSGDVDDALQVFEEMP 308


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 248/844 (29%), Positives = 394/844 (46%), Gaps = 103/844 (12%)

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           K+  +D   WNS++       + N +N       +  +       +  TL  +LK C + 
Sbjct: 12  KIQIKDPKHWNSVI-----KHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ 66

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             V   +++H       L+ D  V  A+V+ Y K G + +A+ +FD M +RDVVLW  M+
Sbjct: 67  NAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMV 126

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLY 291
             Y   G  EE   L  ++ R  L P+  ++  +L       + R    V  Y ++  ++
Sbjct: 127 YGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMF 186

Query: 292 NNNS----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           ++N                             N+V WN  +SGY  VGD   A+E FV M
Sbjct: 187 DSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 246

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +   V++D VT LVA+ A A   +L LG+QIH   +K  F   + + N+L+NMYS  G +
Sbjct: 247 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSL 306

Query: 384 -----------------------------C--------------GLRTDQFTLASVLRAS 400
                                        C              G++ D+ T+  +L   
Sbjct: 307 ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 366

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             L  GL   K +H H IK+    D+ +  AL+ +Y     +   + +F+   G D+ +W
Sbjct: 367 EELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISW 426

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N MI     +    +A ELF  M  S  + +  TI + + AC  +  L  G+ +H Y MK
Sbjct: 427 NTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK 486

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
              E++  + + + DMY+ CG    A+ +F   P  D ++W  MI+  V N +   AL +
Sbjct: 487 HSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLL 546

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGISLVDMY 638
           +H+M +S   P+  T   ++ + + L  L QG+ +HA + +       D  +  + + MY
Sbjct: 547 FHRM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMY 605

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           A+CG+++ A  +FK +  RN + WNAM+ G   +G G + +  F  M   G  P+ VTF+
Sbjct: 606 ARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFV 665

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VLSACS++G +    + FH M + + + PE+ HYS +VD L R G   EA E I SMP 
Sbjct: 666 SVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPI 725

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E  AS+ RALL +CR   D +  K + EKL  LEP ++  YVLLSN++A A  W +V   
Sbjct: 726 EPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRI 785

Query: 819 RGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDT 855
           R  +K K ++K P                       +D I+AK+  L+  ++E GY PD 
Sbjct: 786 RTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDL 845

Query: 856 DFVL 859
            +V 
Sbjct: 846 RWVF 849



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 191/700 (27%), Positives = 322/700 (46%), Gaps = 90/700 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GKS H  I  +  + D  +   ++  Y +CG +  AR +FD M DRD++ WN+++  Y +
Sbjct: 72  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMV--YGY 129

Query: 132 SGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            G G  E   E   L R + RE++   SR T+  LL  C  +  +     VHGY L+ G+
Sbjct: 130 VGWGCYE---EAMLLVREMGRENLRPNSR-TMVALLLACEGASELRLGRGVHGYCLRNGM 185

Query: 191 V-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              +  V+ AL+  Y +F  +R    LFD M  R++V W  M+  Y + G   +   LFV
Sbjct: 186 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 244

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNNNS 295
            +    +  D  ++   +   ++LG  +  +Q+   AIK             L +Y+NN 
Sbjct: 245 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 304

Query: 296 NV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           ++                LWN  +S Y   G +  A++ F+ M    V+ D  T ++ L+
Sbjct: 305 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 364

Query: 341 AVAG-TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------- 383
                   L  G+ +H   +KSG      +GN+L++MY+++ CV                
Sbjct: 365 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 424

Query: 384 ------------------CGL---------RTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                             C L         + + +T+ S+L A   +   L   + IH +
Sbjct: 425 SWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDV-TCLDFGRSIHGY 483

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            +K+    +  + TAL D+Y   G  A A  LFE     DL +WNAMI  Y+ +N +HKA
Sbjct: 484 VMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKA 543

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE--LDLCVSSGIL 534
           L LF  M +  E  + +TI   + +   L  L QG+ +HAY  + GF   LDL +++  +
Sbjct: 544 LLLFHRMISEAEP-NSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFI 602

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            MY +CG++  A++IF  +P  + ++W  MI+G   NG    A+  + QM   G  P+  
Sbjct: 603 TMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGV 662

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQ 653
           TF  ++ A S    +E G Q+  ++++    +   V  S +VD+ A+ G I++A      
Sbjct: 663 TFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDS 722

Query: 654 MDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           M +  +  +W A+L     + + ++   +FE  K   +EP
Sbjct: 723 MPIEPDASVWRALLSSCRAYSDAKQAKTIFE--KLDKLEP 760



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 246/599 (41%), Gaps = 92/599 (15%)

Query: 67  SDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           S+L LG+  H   L +     +  +   L+  Y R    V    LFD M  R+++SWN++
Sbjct: 168 SELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAM 226

Query: 126 LAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ Y   G+       +   LF + L + + F   +T+   ++ C   G +   + +H  
Sbjct: 227 ISGYYDVGD-----YFKALELFVQMLVDEVKFDC-VTMLVAVQACAELGSLKLGKQIHQL 280

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A+K   V D ++  AL+N+YS  G +  +  LF+ +  RD  LW  M+ AYA  G  EE 
Sbjct: 281 AIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEA 340

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDL--GKRHEEQVQAYAIK-------------LL 289
             LF+ +   G+  D+ +V  +L +  +L  G    + + A+ IK             L 
Sbjct: 341 MDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLS 400

Query: 290 LYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y                   +++ WN  +    +      A E F  M  S ++ +S T
Sbjct: 401 MYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYT 460

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------- 381
            +  LAA      L+ G+ IHG  +K        +  +L +MY   G             
Sbjct: 461 IISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCP 520

Query: 382 -----------------------------CVCGLRTDQFTLASVLRASS---SLPEGLHL 409
                                         +     +  T+ +VL + +   +LP+G   
Sbjct: 521 DRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQG--- 577

Query: 410 SKQIHVHAIKN--DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
            + +H +  +       D  ++ A I +Y R GS+  AE +F+     ++ +WNAMI GY
Sbjct: 578 -QSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGY 636

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELD 526
            ++     A+  FS M   G R + +T  + + AC     ++ G Q+ H+         +
Sbjct: 637 GMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPE 696

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           L   S I+D+  + G + +A+   + +P  PD   W  ++S C    +   A +I+ ++
Sbjct: 697 LVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 755



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 8/220 (3%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            SIL      + L  G+S H  ++  S   ++ L   L  MY  CG    AR LF+  PD
Sbjct: 462 ISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPD 521

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RDLISWN+++A+Y  + + +     +   LF  +       S +T+  +L        + 
Sbjct: 522 RDLISWNAMIASYVKNNQAH-----KALLLFHRMISEAEPNS-VTIINVLSSFTHLATLP 575

Query: 177 ASETVHGYALKIG--LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
             +++H Y  + G  L  D  ++ A + +Y++ G ++ A+ +F  + +R+++ W  M+  
Sbjct: 576 QGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAG 635

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           Y  NG G +    F  +   G  P+  +   VL   S  G
Sbjct: 636 YGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSG 675


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 277/974 (28%), Positives = 452/974 (46%), Gaps = 125/974 (12%)

Query: 60   LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
            L+  +    L  GK  H  + ++   PD +L N L++MYS+CGS+  A  +F  M D+D+
Sbjct: 107  LQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDV 166

Query: 120  ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
            +SWN++++ YA  G        E   LF  ++      ++ T   +L  C S   +   E
Sbjct: 167  VSWNAMISGYALHGRDQ-----EAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGE 221

Query: 180  TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
             +H    K G   D  VS AL+N+Y K G +  A+ +F+ M+ER+VV W  M+  Y ++G
Sbjct: 222  QIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 281

Query: 240  FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS---DLG---KRHEEQVQAYAIKLLLYNN 293
               E   LF  L RSG+ P+  S   +LG  +   DLG   K H    QA   + +L  N
Sbjct: 282  DSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGN 341

Query: 294  -----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                                   + N   WN  ++GY + G    A   F  M +   Q 
Sbjct: 342  ALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQP 400

Query: 331  DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------- 381
            D  T+   LA  A   +L+ G+++H     +G+ + + V  +LI+MY+K G         
Sbjct: 401  DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460

Query: 382  ----------------CVC------------------GLRTDQFTLASVLRASSSLPEGL 407
                            C C                   +  D  T  ++L + +S PE L
Sbjct: 461  NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTS-PEDL 519

Query: 408  HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
               + IH    +   ++++ V+ ALI +Y R G++A+A  +F      DL +WNAMI   
Sbjct: 520  ERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAAN 579

Query: 468  ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            +    +  A +LF    + G + D+ T    ++A   L  L  G+ +H    K GF  D+
Sbjct: 580  VQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDI 639

Query: 528  CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
             V + ++ MY KCG++ DA+++F+ +   D V W  M++    +     AL ++ QM+L 
Sbjct: 640  RVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLE 699

Query: 588  GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            GV PD  T++  + A + LTA+E G++IHA L +    +D  V  SL++MY++CG +  A
Sbjct: 700  GVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSA 759

Query: 648  YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
              +F++M  R+   WNA++ G  Q+G G   L+ +E M    + P+  TF  +LS+ +  
Sbjct: 760  KQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQL 819

Query: 708  GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
            G   +A++    +++++ +EP  +HY+++V ALGRAG  KEA E I  +  E++A M  +
Sbjct: 820  GEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWES 879

Query: 768  LLGACRVQGDTETGKWVAEKLMALEPFDSSAYV-LLSNIFAAANQWDDVTSARGEMKRKN 826
            LL ACR+  + E  +   E L+  +   S A    L +I+AAA +W+DV+  +  M+   
Sbjct: 880  LLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAG 939

Query: 827  VKK--------------------DPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
            +                       P   +  K+E L++++ + G+  D  +   D    E
Sbjct: 940  LVALKSCTIEVNSEFHNFIANHLSPQIGVQCKIEELVRKMTDRGFSLDPQYASND--SRE 997

Query: 867  KERALYYHSEKLARAYGLISTP---------------PSSVILSNKEPLY--------AN 903
            KE   +   E LA AYGL  T                PS  +L      Y         N
Sbjct: 998  KECLFFQCPELLAVAYGLEHTASGVSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPN 1057

Query: 904  RFHHLRDGMCPCAD 917
             FH   DG+C C D
Sbjct: 1058 CFHIFEDGICSCGD 1071



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 186/712 (26%), Positives = 319/712 (44%), Gaps = 85/712 (11%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F Q        + + + SIL    S   L  G+  H+RI  +    D  ++  L+ MY +
Sbjct: 189 FYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCK 248

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CGSL  AR++F++M +R+++SW ++++ Y   G+       E   LFR L  S    +++
Sbjct: 249 CGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSR-----EALALFRKLIRSGIQPNKV 303

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           + A +L  C +   +     +H Y  + GL  +  V  AL+++YS+ G +  A+ +FD +
Sbjct: 304 SFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNL 363

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +   W  M+  Y E G  EE F LF  + + G  PD  +   +L + +     D GK
Sbjct: 364 RSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGK 422

Query: 276 RHEEQVQAY------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVG 311
               Q+ +                         A K+       NV+ WN  +S   +  
Sbjct: 423 ELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHD 482

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A + F  M R +V  D +TF+  L +    ++L  G+ IHG   + G  S   V N
Sbjct: 483 LGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVAN 542

Query: 372 SLINMYSKMGCVC-------------------------------------------GLRT 388
           +LI+MY + G +                                            G + 
Sbjct: 543 ALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKG 602

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D++T  +VLRA ++L E L   + IH    K     D  V T LI +Y + GS+ +AE +
Sbjct: 603 DKYTFINVLRAVANL-EDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENV 661

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F      D+  WNAM+  Y  S+    AL+LF  M   G   D  T +TA+ AC  L  +
Sbjct: 662 FSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAV 721

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + GK++HA   ++G E D  VS+ +++MY +CG +  A+ +F  + + D  +W  +I+G 
Sbjct: 722 EHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGY 781

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCS 625
             NG+ ++AL  Y  M  + +VP++ TF  ++ + + L   EQ      ++ K   ++ S
Sbjct: 782 CQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPS 841

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAMLVGLAQHGNGE 676
              +    +V    + G +++A    +++   +  L W ++LV    H N E
Sbjct: 842 EQHYA--YMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVE 891



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 142/257 (55%), Gaps = 1/257 (0%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A  ++ C     L +GK++H +   + F+ D+ +++ ++ MY KCG++ DA ++F  +  
Sbjct: 104 ARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMED 163

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V+W  MISG   +G +  A  +++QM+  G+ P++ TF  ++ A     ALE G QI
Sbjct: 164 KDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQI 223

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H+ + K    SD  V  +L++MY KCG++E A  +F +M  RN V W AM+ G  QHG+ 
Sbjct: 224 HSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDS 283

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E L LF  +   G++P+ V+F  +L AC+    + E  +  H   ++ G+E EV   + 
Sbjct: 284 REALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLK-LHAYIKQAGLEQEVLVGNA 342

Query: 736 LVDALGRAGRTKEAGEL 752
           L+    R G    A ++
Sbjct: 343 LISMYSRCGSLANARQV 359


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 257/855 (30%), Positives = 406/855 (47%), Gaps = 120/855 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERDVVLWKVMLRAYAENG 239
           +H   + +GL      S  L+  Y+ F     +  +F       +V LW  ++RA   NG
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNN 294
              E   L+ +  R  L PD  +   V+   +     ++ K   ++V        LY  N
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGN 154

Query: 295 S------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
           +                        +VV WN  +SGY   G  + A+E +       V  
Sbjct: 155 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVP 214

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------- 381
           DS T    L A  G  ++  G  IHG   K G    VIV N L++MY K           
Sbjct: 215 DSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIF 274

Query: 382 -------------CVCG--------------------LRTDQFTLASVLRASSSLPEGLH 408
                         +CG                     + D  T+ S+L+A   L + L 
Sbjct: 275 DKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD-LE 333

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
             K +H + I +    D+  S  LI++Y + G++  ++ +F      D  +WN+MI  YI
Sbjct: 334 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYI 393

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
            + +  +A++LF  M T   + D +T    +     L  L  GK++H    K GF  ++ 
Sbjct: 394 QNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIV 452

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           VS+ ++DMY KCG M D+  +F ++ A D + W T+I+ CV + + +L L +  +MR  G
Sbjct: 453 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 512

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V PD  T   ++   S L A  QG++IH  + KL   SD  VG  L++MY+KCG++ +++
Sbjct: 513 VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSF 572

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +FK M  ++ V W A++     +G G++ ++ F +M+A G+ PD V F+ ++ ACS++G
Sbjct: 573 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 632

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV E    FH M++ Y IEP +EHY+ +VD L R+    +A + ILSMP +  +S+  AL
Sbjct: 633 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 692

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L ACR+ GDTE  + V+E+++ L P D+  YVL+SNI+AA  +WD V S R  +K + +K
Sbjct: 693 LSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLK 752

Query: 829 KDP----------------ADLIFAKVEGLIKRI-------KEGGYVPDTDFVLLDVEEE 865
           KDP                    F + E + K +        + GY+ +  FVL D++E+
Sbjct: 753 KDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDED 812

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--A 902
           EK   L  HSE+LA A+GL++T P + +                     +  +E L   A
Sbjct: 813 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 872

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH  +DG C C D
Sbjct: 873 NRFHVFKDGACSCGD 887



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 155/636 (24%), Positives = 273/636 (42%), Gaps = 82/636 (12%)

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P  ++  WNSI+ A  H+G       +E   L+   +         T   ++  C     
Sbjct: 76  PSNNVYLWNSIIRALTHNGL-----FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLD 130

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
              ++++H   L +G   D ++  AL+++Y +F  + +A+ +F+ M  RDVV W  ++  
Sbjct: 131 FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 190

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-----VQAYAIKLL 289
           Y  NG+  E   ++      G+ PD  ++  VL     LG   E       ++   IK  
Sbjct: 191 YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKD 250

Query: 290 LYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           +  NN                         + V WN  + GY QVG    +I+ F+ M+ 
Sbjct: 251 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV- 309

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           +  + D +T    L A     +L  G+ +H   + SG+       N LINMY+K G +  
Sbjct: 310 NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 369

Query: 386 ------------------------------------------LRTDQFTLASVLRASSSL 403
                                                     ++ D  T   +L  S+ L
Sbjct: 370 SQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQL 429

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            + LHL K++H    K    ++  VS  L+D+Y + G M ++  +FEN    D+ TWN +
Sbjct: 430 GD-LHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTI 488

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I   + S + +  L + S M T G   D  T+ + +  C  L   +QGK++H    K G 
Sbjct: 489 IASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL 548

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E D+ V + +++MY KCG++ ++  +F  +   D V WT +IS C   GE   A+  + +
Sbjct: 549 ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGE 608

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKC 641
           M  +G+VPD   F  ++ A S    +E+G   + + +K D   +P +     +VD+ ++ 
Sbjct: 609 MEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRS 667

Query: 642 GNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
             ++ A      M ++ ++ +W A+L      G+ E
Sbjct: 668 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTE 703



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 177/719 (24%), Positives = 315/719 (43%), Gaps = 93/719 (12%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T+  L S +LSL    Q+      + +  + S++       D  + KS H R+L+     
Sbjct: 91  THNGLFSEALSLYSETQRIRLQPDTYT--FPSVINACAGLLDFEMAKSIHDRVLDMGFGS 148

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D ++ N L+ MY R   L  AR++F++MP RD++SWNS+++ Y  +G  N     E   +
Sbjct: 149 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN-----EALEI 203

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +   R         T++ +L+ C   G V   + +HG   KIG+  D  V+  L+++Y K
Sbjct: 204 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 263

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           F  + + + +FD M  RD V W  M+  Y++ G  EE   LF+++      PD  ++  +
Sbjct: 264 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 322

Query: 267 LGVISDLG--------------KRHEEQVQAYAIKLLLYNNNSNV--------------- 297
           L     LG                +E    A  I + +Y    N+               
Sbjct: 323 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 382

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  ++ Y+Q G    A++ F  M++++V+ DSVT+++ L+      +L+LG+++H  
Sbjct: 383 VSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCD 441

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG--------------------------------CVCG 385
             K GF S ++V N+L++MY+K G                                C  G
Sbjct: 442 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 501

Query: 386 LRT-----------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
           LR            D  T+ S+L   S L       K+IH    K    +D  V   LI+
Sbjct: 502 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ-GKEIHGCIFKLGLESDVPVGNVLIE 560

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+  +  +F+     D+ TW A+I    +     KA+  F  M  +G   D + 
Sbjct: 561 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 620

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFND 552
               + AC    ++++G   + + MK  ++++  +   + ++D+  +   +  A+     
Sbjct: 621 FVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILS 679

Query: 553 IP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV-KASSCLTALE 610
           +P  PD   W  ++S C  +G+ ++A  +    R+  + PD+  + +LV    + L   +
Sbjct: 680 MPLKPDSSIWGALLSACRMSGDTEIAERVSE--RIIELNPDDTGYYVLVSNIYAALGKWD 737

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           Q R I  ++       DP  G S +++  K          F+Q +  N +L   ML GL
Sbjct: 738 QVRSIRKSIKARGLKKDP--GCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL--GMLAGL 792



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 153/333 (45%), Gaps = 36/333 (10%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTTMISGC 568
           Q  ++H+  +  G    +  S+ ++  Y        + S+F    P+ +   W ++I   
Sbjct: 31  QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRAL 90

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG    ALS+Y + +   + PD +TF  ++ A + L   E  + IH  ++ +   SD 
Sbjct: 91  THNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDL 150

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           ++G +L+DMY +  +++ A  +F++M +R+ V WN+++ G   +G   E L+++   +  
Sbjct: 151 YIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNL 210

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV------------------ 730
           GV PDS T   VL AC   G V E  +  H + EK GI+ +V                  
Sbjct: 211 GVVPDSYTMSSVLRACGGLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID 269

Query: 731 -------------EHYSFLVDALGRAGRTKEAGELILSM--PFEASASMHRALLGACRVQ 775
                          ++ ++    + G  +E+ +L + M   F+       ++L AC   
Sbjct: 270 GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHL 329

Query: 776 GDTETGKWVAEKLMALE-PFDSSAYVLLSNIFA 807
           GD E GK+V + ++      D++A  +L N++A
Sbjct: 330 GDLEFGKYVHDYMITSGYECDTTASNILINMYA 362


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 264/892 (29%), Positives = 420/892 (47%), Gaps = 122/892 (13%)

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS-ETVHGYALKIGLVWDEFVSGALVNI 203
           R+ ++LR  +   SR TL   +   L+S         +H   + +GL      S  L+  
Sbjct: 58  RVMKTLR-VLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAK 116

Query: 204 YSKFGKIREAKFLFD-GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           Y+ F     +  +F       +V  W  ++RA   NG   E   L+ +  R  L PD  +
Sbjct: 117 YAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYT 176

Query: 263 VQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS---------------------- 295
              V+   +     ++ K   ++V        LY  N+                      
Sbjct: 177 FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 236

Query: 296 --NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             +VV WN  +SGY   G  + A+E +       V  DS T    L A  G  ++  G  
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 296

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG----------------------CVCG------ 385
           IHG   K G    VIV N L++MY K                         +CG      
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 356

Query: 386 --------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                          + D  T+ S+L+A   L + L   K +H + I +    D+  S  
Sbjct: 357 YEESIKLFMEMVNQFKPDLLTITSILQACGHLGD-LEFGKYVHDYMITSGYECDTTASNI 415

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI++Y + G++  ++ +F      D  +WN+MI  YI + +  +A++LF  M T   + D
Sbjct: 416 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPD 474

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            +T    +     L  L  GK++H    K GF  ++ VS+ ++DMY KCG M D+  +F 
Sbjct: 475 SVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFE 534

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           ++ A D + W T+I+ CV + + +L L +  +MR  GV PD  T   ++   S L A  Q
Sbjct: 535 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 594

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G++IH  + KL   SD  VG  L++MY+KCG++ +++ +FK M  ++ V W A++     
Sbjct: 595 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 654

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +G G++ ++ F +M+A G+ PD V F+ ++ ACS++GLV E    FH M++ Y IEP +E
Sbjct: 655 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 714

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD L R+    +A + ILSMP +  +S+  ALL ACR+ GDTE  + V+E+++ L
Sbjct: 715 HYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIEL 774

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
            P D+  YVL+SN++AA  +WD V S R  +K + +KKDP                    
Sbjct: 775 NPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKF 834

Query: 833 DLIFAKVEGLIKRIK----EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              F +V  L+  +     + GY+ +  FVL D++E+EK   L  HSE+LA A+GL++T 
Sbjct: 835 SEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTK 894

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P + +                     +  +E L   ANRFH  +DG C C D
Sbjct: 895 PGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGD 946



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 158/662 (23%), Positives = 283/662 (42%), Gaps = 84/662 (12%)

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P  ++  WNSI+ A  H+G       +E   L+   +         T   ++  C     
Sbjct: 135 PSNNVYXWNSIIRALTHNGL-----FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLD 189

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
              ++++H   L +G   D ++  AL+++Y +F  + +A+ +F+ M  RDVV W  ++  
Sbjct: 190 FEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 249

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-----VQAYAIKLL 289
           Y  NG+  E   ++      G+ PD  ++  VL     LG   E       ++   IK  
Sbjct: 250 YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKD 309

Query: 290 LYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           +  NN                         + V WN  + GY QVG    +I+ F+ M+ 
Sbjct: 310 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV- 368

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           +  + D +T    L A     +L  G+ +H   + SG+       N LINMY+K G +  
Sbjct: 369 NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 428

Query: 386 ------------------------------------------LRTDQFTLASVLRASSSL 403
                                                     ++ D  T   +L  S+ L
Sbjct: 429 SQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQL 488

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            + L L K++H    K    ++  VS  L+D+Y + G M ++  +FEN    D+ TWN +
Sbjct: 489 GD-LXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTI 547

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I   + S + +  L + S M T G   D  T+ + +  C  L   +QGK++H    K G 
Sbjct: 548 IASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL 607

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E D+ V + +++MY KCG++ ++  +F  +   D V WT +IS C   GE   A+  + +
Sbjct: 608 ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGE 667

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKC 641
           M  +G+VPD   F  ++ A S    +E+G   + + +K D   +P +     +VD+ ++ 
Sbjct: 668 MEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRS 726

Query: 642 GNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
             ++ A      M ++ ++ +W A+L      G+ E   ++ E +    + PD   +  +
Sbjct: 727 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIE--LNPDDTGYYVL 784

Query: 701 LS 702
           +S
Sbjct: 785 VS 786



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 176/719 (24%), Positives = 312/719 (43%), Gaps = 93/719 (12%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T+  L S +LSL    Q+      + +  + S++       D  + KS H R+L      
Sbjct: 150 THNGLFSEALSLYSETQRIRLQPDTYT--FPSVINACAGLLDFEMAKSIHDRVLXMGFGS 207

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D ++ N L+ MY R   L  AR++F++MP RD++SWNS+++ Y  +G  N     E   +
Sbjct: 208 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN-----EALEI 262

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +   R         T++ +L+ C   G V   + +HG   KIG+  D  V+  L+++Y K
Sbjct: 263 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 322

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           F  + + + +FD M  RD V W  M+  Y++ G  EE   LF+++      PD  ++  +
Sbjct: 323 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 381

Query: 267 LGVISDLG--------------KRHEEQVQAYAIKLLLYNNNSNV--------------- 297
           L     LG                +E    A  I + +Y    N+               
Sbjct: 382 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 441

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  ++ Y+Q G    A++ F  M++++V+ DSVT+++ L+      +L LG+++H  
Sbjct: 442 VSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCD 500

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG--------------------------------CVCG 385
             K GF S ++V N+L++MY+K G                                C  G
Sbjct: 501 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 560

Query: 386 LR-----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
           LR            D  T+ S+L   S L       K+IH    K    +D  V   LI+
Sbjct: 561 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ-GKEIHGCIFKLGLESDVPVGNVLIE 619

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+  +  +F+     D+ TW A+I    +     KA+  F  M  +G   D + 
Sbjct: 620 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 679

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFND 552
               + AC    ++++G   + + MK  ++++  +   + ++D+  +   +  A+     
Sbjct: 680 FVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILS 738

Query: 553 IP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV-KASSCLTALE 610
           +P  PD   W  ++S C  +G+ ++A  +    R+  + PD+  + +LV    + L   +
Sbjct: 739 MPLKPDSSIWGALLSACRMSGDTEIAQRVSE--RIIELNPDDTGYYVLVSNVYAALGKWD 796

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           Q R I  ++       DP  G S +++  K           +Q +  N +L   ML GL
Sbjct: 797 QVRSIRKSIKARGLKKDP--GCSWMEIQNKVYVFGTGTKFSEQFEEVNKLL--GMLAGL 851


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 269/870 (30%), Positives = 421/870 (48%), Gaps = 137/870 (15%)

Query: 175 VWASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKF-----LFDGMQERDVVLW 228
           +W   ++  +  K  +    + +G A V IY  FG +  ++      LFD    RD   +
Sbjct: 7   IWRPPSLENFKPKFRI----YANGVAQVRIYC-FGTVSSSRLYNAHNLFDKSPGRDRESY 61

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIK 287
             +L  ++ +G  +E   LF+++HR G+  D      VL V + L  +    Q+    IK
Sbjct: 62  ISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK 121

Query: 288 LLLYNNNS----------------------------NVVLWNKKLSGYLQVGDNHGAIEC 319
               ++ S                            NVV W   +SGY +   N   +  
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F+ M     Q +S TF  AL  +A       G Q+H   +K+G    + V NSLIN+Y K
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241

Query: 380 MGCV---------------------------CGL----------------RTDQFTLASV 396
            G V                            GL                R  + + ASV
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF- 455
           ++  ++L E L  ++Q+H   +K   + D  + TAL+  Y +  +M +A  LF+      
Sbjct: 302 IKLCANLKE-LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           ++ +W AMI G++ ++   +A++LFS M   G R +E T +  + A    L +    ++H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVH 416

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
           A  +K+ +E    V + +LD YVK G + +A  +F+ I   D VAW+ M++G    GE +
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIHANLIKLDCSSDPFVGISL 634
            A+ ++ ++   G+ P+EFTF+ ++   +   A + QG+Q H   IK    S   V  +L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           + MYAK GNIE A  +FK+   ++ V WN+M+ G AQHG   + L +F++MK   V+ D 
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           VTFIGV +AC++ GLV E  + F +M     I P  EH S +VD   RAG+ ++A ++I 
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
           +MP  A +++ R +L ACRV   TE G+  AEK++A++P DS+AYVLLSN++A +  W +
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716

Query: 815 VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
               R  M  +NVKK+P                        D I+ K+E L  R+K+ GY
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGY 776

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVIL----------------- 894
            PDT +VL D+++E KE  L  HSE+LA A+GLI+TP  S +L                 
Sbjct: 777 EPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKL 836

Query: 895 ----SNKEPLY--ANRFHHL-RDGMCPCAD 917
                 +E +   +NRFHH   DG+C C D
Sbjct: 837 IAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/591 (23%), Positives = 259/591 (43%), Gaps = 94/591 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+ + +  D L G+  H + +    + D  +  +L+  Y +  +    R++FD+M +R
Sbjct: 98  SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++++W ++++ YA     N+ N  E   LF  ++   T  +  T A  L +    G    
Sbjct: 158 NVVTWTTLISGYAR----NSMN-DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VH   +K GL     VS +L+N+Y K G +R+A+ LFD  + + VV W  M+  YA 
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-LLYNNN- 294
           NG   E   +F  +  + +   + S   V+ + ++L + R  EQ+    +K   L++ N 
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 295 ---------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       NVV W   +SG+LQ      A++ F  M R  
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
           V+ +  T+ V L A+          ++H   +K+ +  +  VG +L++ Y K+G V    
Sbjct: 393 VRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448

Query: 384 ---------------------------------------CGLRTDQFTLASVLRASSSLP 404
                                                   G++ ++FT +S+L   ++  
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             +   KQ H  AIK+   +   VS+AL+ +Y + G++  AE +F+ +   DL +WN+MI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY     + KAL++F  M     ++D +T      AC    ++++G++     ++    
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR---- 624

Query: 525 LDLCVS------SGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
            D  ++      S ++D+Y + G +  A  +  ++P P     W T+++ C
Sbjct: 625 -DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 162/362 (44%), Gaps = 41/362 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S S + S+++   +  +L   +  H  ++    + D+ +   LM  YS+C +++ A RLF
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353

Query: 112 DKMP-DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
            ++    +++SW ++++ +  + +G  E V     LF  ++      +  T +    + L
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQN-DGKEEAVD----LFSEMKRKGVRPNEFTYS----VIL 404

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           ++  V +   VH   +K        V  AL++ Y K GK+ EA  +F G+ ++D+V W  
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI--SDLGKRHEEQVQAYAIK- 287
           ML  YA+ G  E    +F +L + G+ P++ +   +L V   ++      +Q   +AIK 
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524

Query: 288 ------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECF 320
                       L +Y    N+               V WN  +SGY Q G    A++ F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS-LINMYSK 379
             M +  V+ D VTF+   AA      +  G++     ++    +     NS ++++YS+
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644

Query: 380 MG 381
            G
Sbjct: 645 AG 646


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 260/843 (30%), Positives = 409/843 (48%), Gaps = 123/843 (14%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+  GK  H  +         F    L+ MY++C +L  AR +FD   + D +SW +++A
Sbjct: 157 DINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIA 216

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y          V +GF +     E++    ++                          +
Sbjct: 217 GY----------VRDGFPM-----EAVKVFDKMQ-------------------------R 236

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G V D+     ++N Y   G++ +A+ LF  +   +VV W VM+  +A+ GF EE    
Sbjct: 237 VGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN------------- 293
           F++L ++GL     S+  VL  I+ L    +   V A AIK  L +N             
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAK 356

Query: 294 -----------NS----NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                      NS    N+VLWN  L G+ Q G     +E F  M R   Q D  TF   
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSI 416

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
            +A A    L+ G Q+H   +K+ F S + V N+L++MY+K G +               
Sbjct: 417 FSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDN 476

Query: 384 ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G+  D+ +LAS++ A +++ E     +Q H 
Sbjct: 477 VSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKE-FKQGQQCHC 535

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             +K      +   ++LID+Y + G +  A  +F +    ++ + NA+I GY +S+   +
Sbjct: 536 LLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSH-LEE 594

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF----ELDLCVSS 531
           A+ LF  +   G +  E+T A  +  C    ML  G+Q+H   MK GF    E+ +CVS 
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM-VCVS- 652

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            +L MY+      D++++F+++  P   V WT +ISG       + AL  Y  MR   ++
Sbjct: 653 -LLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+ TFA +++A + +++L+ G+++H+ +     + D     SL+DMYAKCG+++ +  +
Sbjct: 712 PDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQV 771

Query: 651 FKQMDMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           F +M  RN+V+ WN+M+VGLA++G  EE L++F+ M+   + PD VTF+GVLSACS+ G 
Sbjct: 772 FHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           VSE  + F LM   Y ++P V+H   +VD LGR G   EA E I  +  +A   +   LL
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLL 891

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR  GD   GK  A KLM L+P  SS+YVLLS ++A +  W    S R EMK K VKK
Sbjct: 892 GACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKK 951

Query: 830 DPA 832
            P 
Sbjct: 952 LPG 954



 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 208/749 (27%), Positives = 355/749 (47%), Gaps = 80/749 (10%)

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
            A+ST+     K  H++ L         L N ++ +Y +CG++ +A++ F ++  +D+ +
Sbjct: 55  QALSTA-----KVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFA 109

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-------TSRLTLAPLLKLCLSSGY 174
           WNS+L+ Y   G            LF ++ +S           +  T A +L  C     
Sbjct: 110 WNSVLSMYLDHG------------LFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQD 157

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + VH    K+G  +  F  G L+++Y+K   +R+A+ +FDG    D V W  ++  
Sbjct: 158 INYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAG 217

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +GF  E   +F  + R G  PD  ++  V+     LG+       A A KL     N
Sbjct: 218 YVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRL------ADARKLFTQIPN 271

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            NVV WN  +SG+ + G    AI  F+ + ++ ++    +    L+A+A    LN G  +
Sbjct: 272 PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV 331

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSK-------------------------MGCVC----- 384
           H   +K G    V VG++L+NMY+K                         +G        
Sbjct: 332 HAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA 391

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G + D+FT  S+  A +SL   L    Q+H   IKN   ++ FV+ A
Sbjct: 392 QEVMEFFSYMKRHGPQPDEFTFTSIFSACASL-HYLDFGGQLHTVMIKNKFTSNLFVANA 450

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y ++G++ EA   FE     D  +WNA+I GY+    + +A  +F  M ++G   D
Sbjct: 451 LVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E+++A+ V AC  +   KQG+Q H   +K G +   C  S ++DMYVKCG ++ A+ +F 
Sbjct: 511 EVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P  + V+   +I+G   +  E+ A+ ++ ++++ G+ P E TFA L+        L  
Sbjct: 571 SMPYRNVVSINALIAGYTMSHLEE-AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629

Query: 612 GRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGL 669
           GRQIH  ++K    SS   V +SL+ MY       D+  LF ++   +  V+W A++ G 
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGY 689

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS-EAYENFHLMREKYGIEP 728
           AQ  + E+ L+ ++ M++  + PD  TF  VL AC+  G+ S +  +  H +    G   
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQATFASVLRACA--GMSSLQTGQEVHSLIFHTGFNM 747

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +    S L+D   + G  K + ++   MP
Sbjct: 748 DEITCSSLIDMYAKCGDVKGSLQVFHEMP 776



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 301/681 (44%), Gaps = 103/681 (15%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R     ++S    L+K+   ++ SS    S+L    S S L  G   HA+ +      + 
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLG--SVLSAIASLSMLNYGSMVHAQAIKEGLDDNV 344

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           ++ + L+ MY++C  +  A+++F+ + +R+++ WN++L  +A +G   A+ V E    F 
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL--AQEVME---FFS 399

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            ++         T   +   C S  Y+     +H   +K     + FV+ ALV++Y+K G
Sbjct: 400 YMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSG 459

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            ++EA+  F+ M+  D V W  ++  Y +  + +E F +F  +  +G+ PD+ S+  ++ 
Sbjct: 460 ALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519

Query: 269 VISDLGK-RHEEQVQAYAIKLLLYNNN----------------------------SNVVL 299
             +++ + +  +Q     +K+ L  +                              NVV 
Sbjct: 520 ACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVS 579

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
            N  ++GY  +     AI  F  +    ++   VTF   L    G   LNLG+QIHG  +
Sbjct: 580 INALIAGY-TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM 638

Query: 360 KSGFYSAV-IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           K GF S+  +V  SL+ MY        + + +F  +  L +    P+GL           
Sbjct: 639 KWGFLSSSEMVCVSLLCMY--------MNSQRFADSETLFSELQYPKGL----------- 679

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                                                    W A+I GY   N+  KAL+
Sbjct: 680 ---------------------------------------VVWTALISGYAQQNHHEKALQ 700

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            + HM +     D+ T A+ ++AC  +  L+ G+++H+    +GF +D    S ++DMY 
Sbjct: 701 FYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYA 760

Query: 539 KCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           KCG +  +  +F+++P  + V +W +MI G   NG  + AL I+ QM    ++PDE TF 
Sbjct: 761 KCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFL 820

Query: 598 ILVKASSCLTALEQGRQIH---ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            ++ A S    + +GR++     N  KL    D      +VD+  + G + +A     ++
Sbjct: 821 GVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLG--CMVDILGRWGFLNEAEEFINKL 878

Query: 655 DMR-NTVLWNAMLVGLAQHGN 674
             + + +LW+ +L    +HG+
Sbjct: 879 GCKADPMLWSTLLGACRKHGD 899



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 159/333 (47%), Gaps = 11/333 (3%)

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           K    L  L   K +H+ ++K G  L   + + I+D+YVKCG +  AQ  F+ +   D  
Sbjct: 49  KPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           AW +++S  +D+G     +  +  M   GV P+EFTFA+++ A S L  +  G+Q+H  +
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGV 168

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            K+      F    L+DMYAKC N+ DA ++F      +TV W  ++ G  + G   E +
Sbjct: 169 FKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAV 228

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           K+F+ M+  G  PD +  + V++A    G +++A + F  +       P V  ++ ++  
Sbjct: 229 KVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIP-----NPNVVAWNVMISG 283

Query: 740 LGRAGRTKEAGELILSMP---FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
             + G  +EA    L +     +A+ S   ++L A         G  V  + +  E  D 
Sbjct: 284 HAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIK-EGLDD 342

Query: 797 SAYV--LLSNIFAAANQWDDVTSARGEMKRKNV 827
           + YV   L N++A  ++ D        +  +N+
Sbjct: 343 NVYVGSALVNMYAKCSKMDAAKQVFNSLGERNI 375


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/786 (31%), Positives = 379/786 (48%), Gaps = 117/786 (14%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +HG  ++     + F+   +V+ Y+       A+ +FD + + ++  W  +L AY++ 
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
           G   E+   F  L      PD + V                                   
Sbjct: 86  GLISEMESTFEKL------PDRDGVT---------------------------------- 105

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            WN  + GY   G    A++ +  M+R  +     VT +  L   +   +++LG+QIHG 
Sbjct: 106 -WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            +K GF S ++VG+ L+ MY+ +GC+   +   + L                        
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD---------------------- 202

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            +N  + +S +   L    C  G + +A  LF   +  D  +W AMI G   +  + +A+
Sbjct: 203 -RNTVMYNSLMGGLLA---C--GMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAI 255

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           E F  M   G ++D+    + + ACG L  + +GKQ+HA  +++ F+  + V S ++DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KC  +  A+++F+ +   + V+WT M+ G    G  + A+ I+  M+ SG+ PD +T  
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
             + A + +++LE+G Q H   I         V  SLV +Y KCG+I+D+  LF +M++R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           + V W AM+   AQ G   ET++LF+ M  HG++PD VT  GV+SACS  GLV +    F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
            LM  +YGI P + HYS ++D   R+GR +EA   I  MPF   A     LL ACR +G+
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----- 832
            E GKW AE L+ L+P   + Y LLS+I+A+  +WD V   R  M+ KNVKK+P      
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615

Query: 833 ------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                             D I+AK+E L  +I + GY PDT FV  DVEE  K + L YH
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYH 675

Query: 875 SEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDG 911
           SE+LA A+GLI  P    I                     ++ +E L   A RFH  +DG
Sbjct: 676 SERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDG 735

Query: 912 MCPCAD 917
            C C D
Sbjct: 736 TCSCGD 741



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 236/594 (39%), Gaps = 149/594 (25%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  H  I+ +   P+ FL NN++  Y+   S  YARR+FD++P  +L SWN++L AY+ +
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 133 G---------------EGNAENV-TEGFRLF-----------RSLRESITFTSRLTLAPL 165
           G               +G   NV  EG+ L              +R+     +R+TL  +
Sbjct: 86  GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LKL  S+G+V   + +HG  +K+G      V   L+ +Y+  G I +AK +F G+ +R+ 
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205

Query: 226 VL------------------------------WKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V+                              W  M++  A+NG  +E    F ++   G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265

Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQA----------------------------YAI 286
           L  D      VL     LG  +E +Q+ A                            YA 
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325

Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
            +       NVV W   + GY Q G    A++ F++M RS +  D  T   A++A A   
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           +L  G Q HG  + SG    V V NSL+ +Y K    CG   D   L + +         
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK----CGDIDDSTRLFNEM--------- 432

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
                           V D+   TA++  Y + G   E                      
Sbjct: 433 ---------------NVRDAVSWTAMVSAYAQFGRAVE---------------------- 455

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
                     ++LF  M   G + D +T+   + AC    ++++G Q +   M S + + 
Sbjct: 456 ---------TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGIV 505

Query: 527 LCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             +   S ++D++ + G + +A    N +P  PD + WTT++S C + G  ++ 
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA I+ ++     ++ + L+ MY +C  L YA+ +FD+M  ++++SW +++  Y  
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        E  ++F  ++ S       TL   +  C +   +      HG A+  GL+
Sbjct: 349 TGRAE-----EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               VS +LV +Y K G I ++  LF+ M  RD V W  M+ AYA+ G   E   LF  +
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
            + GL PD  ++  V+   S  G
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAG 486



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/390 (20%), Positives = 161/390 (41%), Gaps = 55/390 (14%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           FS++ +     ++L+ + S   + LGK  H +++         + + L+ MY+  G +  
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSG-----------------------EGNAEN--VT 141
           A+++F  + DR+ + +NS++      G                       +G A+N    
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E    FR ++       +     +L  C   G +   + +H   ++       +V  AL+
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y K   +  AK +FD M++++VV W  M+  Y + G  EE   +F+D+ RSG+ PD  
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372

Query: 262 SVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYN--------------- 292
           ++   +   +++    E  Q    AI              + LY                
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N  + V W   +S Y Q G     I+ F  M++  ++ D VT    ++A +    +  GQ
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492

Query: 353 QIHG-TTLKSGFYSAVIVGNSLINMYSKMG 381
           +     T + G   ++   + +I+++S+ G
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           + S L  G   H + + S  I    ++N+L+T+Y +CG +  + RLF++M  RD +SW +
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +++AYA  G        E  +LF  + +       +TL  ++  C  +G V   +     
Sbjct: 443 MVSAYAQFGRA-----VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497

Query: 185 AL-KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
              + G+V        +++++S+ G++ EA    +GM    D + W  +L A    G
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 267/857 (31%), Positives = 418/857 (48%), Gaps = 120/857 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENG 239
           +H   + +GL   +F SG L++ YS F +   +  +F  +   ++V LW  ++RA+++NG
Sbjct: 26  IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNN 294
              E    +  L  S + PD  +   V+   +     ++G    EQ+     +  L+  N
Sbjct: 86  LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145

Query: 295 S------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
           +                        ++V WN  +SGY   G    A+E +  +  S +  
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM---------- 380
           DS T    L A      +  GQ +HG  LKSG  S V+V N L+ MY K           
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265

Query: 381 ------------GCVCG--------------------LRTDQFTLASVLRASSSLPEGLH 408
                         +CG                     + D  T++SVLRA   L + L 
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRD-LS 324

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L+K I+ + +K   V +S V   LIDVY + G M  A  +F + +  D  +WN++I GYI
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
            S +  +A++LF  M    E+ D IT    +     L  LK GK +H+  +KSG  +DL 
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           VS+ ++DMY KCG + D+  IF+ +   D V W T+IS CV  G+    L +  QMR S 
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           VVPD  TF + +   + L A   G++IH  L++    S+  +G +L++MY+KCG +E++ 
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M  R+ V W  M+     +G GE+ L+ F DM+  G+ PDSV FI ++ ACS++G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV E    F  M+  Y I+P +EHY+ +VD L R+ +  +A E I +MP +  AS+  ++
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L ACR  GD ET + V+ +++ L P D    +L SN +AA  +WD V+  R  +K K++ 
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744

Query: 829 KDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV-EE 864
           K+P                       ++ I+  +E L   + + GY+PD   V  ++ EE
Sbjct: 745 KNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEE 804

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY-- 901
           EEK R +  HSE+LA A+GL++T P + +                     +  +E L   
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864

Query: 902 ANRFHHLRDGMCPCADN 918
           ANRFH  +DG C C D 
Sbjct: 865 ANRFHLFKDGTCSCKDR 881



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 170/740 (22%), Positives = 313/740 (42%), Gaps = 89/740 (12%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDR 117
           I R   S+S+L   +  HA +++       F +  L+  YS       +  +F ++ P +
Sbjct: 10  ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++  WNSI+ A++ +G        E    +  LRES     + T   ++K C        
Sbjct: 70  NVYLWNSIIRAFSKNGL-----FPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + V+   L +G   D FV  ALV++YS+ G +  A+ +FD M  RD+V W  ++  Y+ 
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKL-------- 288
           +G+ EE   ++ +L  S + PD  +V  VL    +L    + Q +  +A+K         
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244

Query: 289 --------LLYNNNSNV------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                   L +   ++             V +N  + GYL++     ++  F+  +    
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQF 303

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR- 387
           + D +T    L A     +L+L + I+   LK+GF     V N LI++Y+K G +   R 
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363

Query: 388 ------------------------------------------TDQFTLASVLRASSSLPE 405
                                                      D  T   ++  S+ L +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   K +H + IK+    D  VS ALID+Y + G + ++  +F +    D  TWN +I 
Sbjct: 424 -LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
             +   +    L++ + M  S    D  T    +  C  L   + GK++H   ++ G+E 
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           +L + + +++MY KCG + ++  +F  +   D V WT MI      GE + AL  +  M 
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGN 643
            SG+VPD   F  ++ A S    +++G      + K     DP +     +VD+ ++   
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM-KTHYKIDPMIEHYACVVDLLSRSQK 661

Query: 644 IEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           I  A    + M ++ +  +W ++L      G+ E   ++    +   + PD   +  +L+
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV--SRRIIELNPDDPGY-SILA 718

Query: 703 ACSYTGLVSEAYENFHLMRE 722
           + +Y  L    ++   L+R+
Sbjct: 719 SNAYAAL--RKWDKVSLIRK 736



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 281/632 (44%), Gaps = 85/632 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++      D  +G   + +IL+     D F+ N L+ MYSR G L  AR++FD+MP R
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SWNS+++ Y+  G        E   ++  L+ S       T++ +L    +   V  
Sbjct: 171 DLVSWNSLISGYSSHG-----YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQ 225

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG+ALK G+     V+  LV +Y KF +  +A+ +FD M  RD V +  M+  Y +
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDL-------------GKRHEEQV 281
               EE   +F++ +     PD  +V  VL   G + DL             G   E  V
Sbjct: 286 LEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344

Query: 282 QAYAIKLL-----------LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +   I +            ++N+    + V WN  +SGY+Q GD   A++ F  M+    
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------- 381
           Q D +T+L+ ++      +L  G+ +H   +KSG    + V N+LI+MY+K G       
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464

Query: 382 -------------------CV-CGLRTDQFTLASVLRASSSLPE---------------G 406
                              CV  G       + + +R S  +P+                
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
             L K+IH   ++    ++  +  ALI++Y + G +  +  +FE     D+ TW  MI+ 
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y +     KALE F+ M  SG   D +     + AC    ++ +G       MK+ +++D
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFE-KMKTHYKID 643

Query: 527 LCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +   + ++D+  +   +  A+     +P  PD   W +++  C  +G+ + A  +   
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV--S 701

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            R+  + PD+  ++IL  AS+   AL +  ++
Sbjct: 702 RRIIELNPDDPGYSIL--ASNAYAALRKWDKV 731



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 205/415 (49%), Gaps = 9/415 (2%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN- 451
           ++  L +SS+L E     ++IH   I     +  F S  LID Y      A +  +F   
Sbjct: 10  ISRALSSSSNLNE----LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               ++  WN++I  +  +    +ALE +  +  S    D+ T  + +KAC  L   + G
Sbjct: 66  SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
             ++   +  GFE DL V + ++DMY + G +  A+ +F+++P  D V+W ++ISG   +
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G  + AL IYH+++ S +VPD FT + ++ A   L  ++QG+ +H   +K   +S   V 
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
             LV MY K     DA  +F +MD+R++V +N M+ G  +    EE++++F +      +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFK 304

Query: 692 PDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           PD +T   VL AC +   +S A Y   ++++  + +E  V +   L+D   + G    A 
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITAR 362

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           ++  SM  + + S +  + G  +     E  K     ++  E  D   Y++L ++
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/720 (32%), Positives = 382/720 (53%), Gaps = 96/720 (13%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N  ++V W+  +S +        AI  F++M+      +   F   + A +  +   +G+
Sbjct: 89  NKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGE 148

Query: 353 QIHGTTLKSGFYSA-VIVGNSLINMYSK-------------------------------- 379
            I+G  +K+G+  A V VG  LI+M+ K                                
Sbjct: 149 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQ 208

Query: 380 MGC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +GC            + G   D+FT +SVL A + L   L L KQ+H   I+     D  
Sbjct: 209 LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL-LALGKQLHSRVIRLGLALDVC 267

Query: 428 VSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-ALELFSHM 483
           V  +L+D+Y +   +GS+ ++  +FE     ++ +W A+I  Y+ S    K A+ELF  M
Sbjct: 268 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 327

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
            +   R +  + ++ +KACG L     G+Q+++YA+K G     CV + ++ MY + G M
Sbjct: 328 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 387

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA+  F+ +   + V++  ++ G   N + + A  +++++  +G+    FTFA L+  +
Sbjct: 388 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 447

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + + A+ +G QIH  L+K    S+  +  +L+ MY++CGNIE A+ +F +M+ RN + W 
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 507

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           +M+ G A+HG     L++F  M   G +P+ +T++ VLSACS+ G++SE  ++F+ M ++
Sbjct: 508 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 567

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           +GI P +EHY+ +VD LGR+G   EA E I SMP  A A + R LLGACRV G+TE G+ 
Sbjct: 568 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 627

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------ 831
            AE ++  EP D +AY+LLSN+ A+A QW DV   R  MK +N+ K+             
Sbjct: 628 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 687

Query: 832 -----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                      A  I+ +++ L  +IKE GY+PDTDFVL D+EEE+KE+ L+ HSEK+A 
Sbjct: 688 RFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAV 747

Query: 881 AYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           A+GLIST  S  I                      + +E +   +NRFHH+++G+C C D
Sbjct: 748 AFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 807



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 271/600 (45%), Gaps = 87/600 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-R 117
           +L+  I   +  LGK  H +++ S    D  + N L+++YS+CG    AR +F+ M + R
Sbjct: 32  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 91

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SW+++++ +A     N     +    F  + E   + +    A +++ C ++ Y W 
Sbjct: 92  DLVSWSAMVSCFA-----NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146

Query: 178 SETVHGYALKIG-LVWDEFVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            E ++G+ +K G L  D  V   L++++ K  G +  A  +FD M ER++V W +M+  +
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN- 293
           A+ G   +   LF+D+  SG  PD  +   VL   ++LG     +Q+ +  I+L L  + 
Sbjct: 207 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266

Query: 294 ------------------------------NSNVVLWNKKLSGYLQVGD-NHGAIECFVN 322
                                           NV+ W   ++ Y+Q G+ +  AIE F  
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 326

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           MI  +++ +  +F   L A     +   G+Q++   +K G  S   VGNSLI+MY++ G 
Sbjct: 327 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 386

Query: 383 V-------------------------------------------CGLRTDQFTLASVLRA 399
           +                                            G+    FT AS+L  
Sbjct: 387 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 446

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           ++S+   +   +QIH   +K    ++  +  ALI +Y R G++  A  +F   +  ++ +
Sbjct: 447 AASIG-AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 505

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYA 518
           W +MI G+     + +ALE+F  M  +G + +EIT    + AC  + M+ +G K  ++  
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            + G    +   + ++D+  + G +V+A    N +P   D + W T++  C  +G  +L 
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 625



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 232/499 (46%), Gaps = 52/499 (10%)

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           L VG  H A      M + N   D  T+ + L +     N  LG+ +H   ++SG     
Sbjct: 2   LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 61

Query: 368 IVGNSLINMYSKMG--------------------------CVC----------------- 384
           +V N+LI++YSK G                          C                   
Sbjct: 62  VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121

Query: 385 -GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCR-NGS 441
            G   +++  A+V+RA S+      + + I+   +K   + AD  V   LID++ + +G 
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAW-VGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD 180

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +  A  +F+     +L TW  MI  +     +  A++LF  M  SG   D  T ++ + A
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---GAMVDAQSIFNDIPAPDD 558
           C  L +L  GKQ+H+  ++ G  LD+CV   ++DMY KC   G++ D++ +F  +P  + 
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300

Query: 559 VAWTTMISGCVDNGEEDL-ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           ++WT +I+  V +GE D  A+ ++ +M    + P+ F+F+ ++KA   L+    G Q+++
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 360

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             +KL  +S   VG SL+ MYA+ G +EDA   F  +  +N V +NA++ G A++   EE
Sbjct: 361 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 420

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
              LF ++   G+   + TF  +LS  +  G + +  E  H    K G +      + L+
Sbjct: 421 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG-EQIHGRLLKGGYKSNQCICNALI 479

Query: 738 DALGRAGRTKEAGELILSM 756
               R G  + A ++   M
Sbjct: 480 SMYSRCGNIEAAFQVFNEM 498



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 162/328 (49%), Gaps = 36/328 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC---GSLVYARRLFDKM 114
           S+L        L LGK  H+R++      D  +  +L+ MY++C   GS+  +R++F++M
Sbjct: 236 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 295

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+ +++SW +I+ AY  SGE + E +     LF  +       +  + + +LK C +   
Sbjct: 296 PEHNVMSWTAIITAYVQSGECDKEAI----ELFCKMISGHIRPNHFSFSSVLKACGNLSD 351

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            +  E V+ YA+K+G+     V  +L+++Y++ G++ +A+  FD + E+++V +  ++  
Sbjct: 352 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 411

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------ 287
           YA+N   EE F LF ++  +G+     +   +L   + +G   + EQ+    +K      
Sbjct: 412 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 471

Query: 288 -------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                  + +Y+                + NV+ W   ++G+ + G    A+E F  M+ 
Sbjct: 472 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 531

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +  + + +T++  L+A +    ++ GQ+
Sbjct: 532 TGTKPNEITYVAVLSACSHVGMISEGQK 559



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 12/239 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HFS SS       +L+   + SD   G+  ++  +         + N+L++MY+R 
Sbjct: 332 IRPNHFSFSS-------VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 384

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G +  AR+ FD + +++L+S+N+I+  YA + +       E F LF  + ++    S  T
Sbjct: 385 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE-----EAFLLFNEIADTGIGISAFT 439

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    S G +   E +HG  LK G   ++ +  AL+++YS+ G I  A  +F+ M+
Sbjct: 440 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 499

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +R+V+ W  M+  +A++GF      +F  +  +G  P++ +   VL   S +G   E Q
Sbjct: 500 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 558


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 265/819 (32%), Positives = 399/819 (48%), Gaps = 115/819 (14%)

Query: 179  ETVHGYALKIGLVWDEFVSGA--LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
            + +H +  K G      V+ A  LVN+Y K G +  A+ +FD + +RD V W  M+    
Sbjct: 350  KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 237  ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--GKRHEEQVQAYAIK---LLLY 291
                 E   HLF  +    + P   ++  V    S +  G R  +QV AY ++   L  Y
Sbjct: 410  RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY 469

Query: 292  NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
             NN+ V +       Y ++G  + A   F                       G D ++  
Sbjct: 470  TNNALVTM-------YARLGRVNDAKALF-------------------GVFDGKDLVSWN 503

Query: 352  QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
              I   +    F  A+        MY  +  V G+R D  TLASVL A S L E L + +
Sbjct: 504  TVISSLSQNDRFEEAL--------MYVYLMIVDGVRPDGVTLASVLPACSQL-ERLRIGR 554

Query: 412  QIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            +IH +A++N D + +SFV TAL+D+YC      +   +F+      +A WNA++ GY  +
Sbjct: 555  EIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARN 614

Query: 471  NNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                +AL LF  M +  E   +  T A+ + AC    +    + +H Y +K GF  D  V
Sbjct: 615  EFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYV 674

Query: 530  SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL--- 586
             + ++DMY + G +  +++IF  +   D V+W TMI+GC+  G  D AL++ H+M+    
Sbjct: 675  QNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQG 734

Query: 587  -------------SGVV--PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
                          GV   P+  T   ++   + L AL +G++IHA  +K   + D  VG
Sbjct: 735  EDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVG 794

Query: 632  ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-- 689
             +LVDMYAKCG +  A  +F QM +RN + WN +++    HG GEE L+LF  M A G  
Sbjct: 795  SALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGS 854

Query: 690  ----VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
                + P+ VT+I + +ACS++G+V E    FH M+  +G+EP  +HY+ LVD LGR+GR
Sbjct: 855  NREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGR 914

Query: 746  TKEAGELILSMPFEAS-ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
             KEA ELI +MP   +      +LLGACR+    E G+  A+ L  LEP  +S YVL+SN
Sbjct: 915  VKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSN 974

Query: 805  IFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEG 841
            I+++A  WD     R +MK   V+K+P                       +  +   +E 
Sbjct: 975  IYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLET 1034

Query: 842  LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY 901
            L +R+++ GYVPD   VL +V++EEKE  L  HSE+LA A+GL++TPP + I   K    
Sbjct: 1035 LSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRV 1094

Query: 902  AN-----------------------RFHHLRDGMCPCAD 917
             N                       RFHH  +G C C D
Sbjct: 1095 CNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGD 1133



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 160/615 (26%), Positives = 259/615 (42%), Gaps = 111/615 (18%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMP 115
           ++L+ A +  DL LGK  HA +      P     + N+L+ MY +CG L  AR++FD +P
Sbjct: 335 AVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIP 394

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS-SGY 174
           DRD +SWNS++A      E   E     FRL   L E++  TS  TL  +   C    G 
Sbjct: 395 DRDHVSWNSMIATLCRFEEW--ELSLHLFRLM--LSENVDPTS-FTLVSVAHACSHVRGG 449

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V   + VH Y L+ G +   + + ALV +Y++ G++ +AK LF     +D+V W  ++ +
Sbjct: 450 VRLGKQVHAYTLRNGDL-RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISS 508

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------ 287
            ++N   EE       +   G+ PD  ++  VL   S L + R   ++  YA++      
Sbjct: 509 LSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIE 568

Query: 288 --------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                   + +Y N                  V +WN  L+GY +   +  A+  FV MI
Sbjct: 569 NSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMI 628

Query: 325 -RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-- 381
             S    ++ TF   L A       +  + IHG  +K GF     V N+L++MYS+MG  
Sbjct: 629 SESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRV 688

Query: 382 -------------------------CVCGLRTDQF------------------------- 391
                                     VCG   D                           
Sbjct: 689 EISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDG 748

Query: 392 ---------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                    TL +VL   ++L   L   K+IH +A+K     D  V +AL+D+Y + G +
Sbjct: 749 GVPFKPNSVTLMTVLPGCAAL-AALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCL 807

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE------RLDEITIA 496
             A  +F+     ++ TWN +I  Y +     +ALELF  M   G       R +E+T  
Sbjct: 808 NLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYI 867

Query: 497 TAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
               AC    M+ +G  + H      G E      + ++D+  + G + +A  + N +P+
Sbjct: 868 AIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPS 927

Query: 556 PDDV--AWTTMISGC 568
             +   AW++++  C
Sbjct: 928 NLNKVDAWSSLLGAC 942



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           + W  ++     S++   A+  ++ M  +    D       +KA   +  L  GKQ+HA+
Sbjct: 296 SQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAH 355

Query: 518 AMKSGF--ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
             K G      + V++ +++MY KCG +  A+ +F+DIP  D V+W +MI+      E +
Sbjct: 356 VFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWE 415

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLT-ALEQGRQIHANLIKLDCSSDPFVGISL 634
           L+L ++  M    V P  FT   +  A S +   +  G+Q+HA  ++ +     +   +L
Sbjct: 416 LSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR-NGDLRTYTNNAL 474

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           V MYA+ G + DA  LF   D ++ V WN ++  L+Q+   EE L     M   GV PD 
Sbjct: 475 VTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDG 534

Query: 695 VTFIGVLSACS 705
           VT   VL ACS
Sbjct: 535 VTLASVLPACS 545



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            ++L    + + L  GK  HA  +      D  + + L+ MY++CG L  A R+FD+MP 
Sbjct: 760 MTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI 819

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFR----SLRESITFTSRLTLAPLLKLCLSS 172
           R++I+WN ++ AY   G+G  E   E FR+      S RE I   + +T   +   C  S
Sbjct: 820 RNVITWNVLIMAYGMHGKG--EEALELFRIMTAGGGSNREVIR-PNEVTYIAIFAACSHS 876

Query: 173 GYVWASETVHGY-----ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE--RDV 225
           G V   E +H +     +  +    D +    LV++  + G+++EA  L + M      V
Sbjct: 877 GMV--DEGLHLFHTMKASHGVEPRGDHY--ACLVDLLGRSGRVKEAYELINTMPSNLNKV 932

Query: 226 VLWKVML---RAYAENGFGE-EVFHLFV 249
             W  +L   R +    FGE    HLFV
Sbjct: 933 DAWSSLLGACRIHQSVEFGEIAAKHLFV 960


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 257/807 (31%), Positives = 397/807 (49%), Gaps = 115/807 (14%)

Query: 161 TLAPLLKLCLSSG---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           +LA +L  CL +G       +  +H  A   G + D F++  L+  YS  G++R+A+ LF
Sbjct: 17  SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF 76

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL-CPDDESVQCVLGVISD---- 272
           D M  R++V W  ++  Y ++G  +    LFV   ++    P++  +  VL   +     
Sbjct: 77  DRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAV 136

Query: 273 -LGKRHEEQVQAYAIKLLLYNNNSNV-------------------------------VLW 300
            LG    EQV   A+KL L   ++NV                               V W
Sbjct: 137 SLG----EQVHGIAVKLDL---DANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTW 189

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  ++GY Q+G    A+E F  M    V+ D      A++A +    L  G+QIHG   +
Sbjct: 190 NTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYR 249

Query: 361 SGFYSAVIVGNSLINMYSK----------MGCV--------------------------- 383
           S   +   V N LI++Y K            C+                           
Sbjct: 250 SATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITM 309

Query: 384 ------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                  G + D F   S+L +  SL   +   +QIH H IK D  AD +V  ALID+Y 
Sbjct: 310 FWNMTQAGWQPDGFACTSILNSCGSLA-AIWQGRQIHAHVIKADLEADEYVKNALIDMYA 368

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           +   + EA  +F+     D  ++NAMI GY  + +  +A+ +F  M     R   +T  +
Sbjct: 369 KCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVS 428

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +      L ++  KQ+H   +KSG  LDL  +S ++D+Y KC  + DA+++FN +   D
Sbjct: 429 LLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKD 488

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V W +MI G   N + + A+ +++Q+ LSG+ P+EFTF  LV  +S L ++  G+Q HA
Sbjct: 489 MVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHA 548

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +IK    +DP V  +L+DMYAKCG I++  +LF+     + + WN+M+   AQHG+ EE
Sbjct: 549 WIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEE 608

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L++F  M    VEP+ VTF+GVLSAC++ G V E   +F+ M+  Y IEP +EHY+ +V
Sbjct: 609 ALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVV 668

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           +  GR+G+   A E I  MP + +A++ R+LL AC + G+ E G++ AE  +  +P DS 
Sbjct: 669 NLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSG 728

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADL 834
            YVLLSNI+A+   W DV + R +M      K+                        A+L
Sbjct: 729 PYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAEL 788

Query: 835 IFAKVEGLIKRIKEGGYVPDT-DFVLL 860
           I++ ++ L   IK  GYVPDT D  LL
Sbjct: 789 IYSVLDELTSLIKNLGYVPDTSDHTLL 815



 Score =  248 bits (634), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 187/682 (27%), Positives = 305/682 (44%), Gaps = 83/682 (12%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           L  + HAR   + ++ D FLTN L+  YS  G L  AR LFD+MP R+L+SW S+++ Y 
Sbjct: 36  LNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYT 95

Query: 131 HSGEGNAENVTEGFRLFRSLRE-SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             G  +         LF + ++ S    +   LA +L+ C  S  V   E VHG A+K+ 
Sbjct: 96  QHGRDDC-----AISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLD 150

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  + +V  AL+N+Y+K G + EA  +F  +  R  V W  ++  YA+ G G     LF 
Sbjct: 151 LDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFD 210

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNNNS------------- 295
            +   G+ PD   +   +   S LG      Q+  YA +     + S             
Sbjct: 211 RMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCS 270

Query: 296 ---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                          N+V W   +SGY+Q   N  AI  F NM ++  Q D       L 
Sbjct: 271 RLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILN 330

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------- 384
           +      +  G+QIH   +K+   +   V N+LI+MY+K   +                 
Sbjct: 331 SCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAIS 390

Query: 385 ---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                                       LR    T  S+L  SSS    + LSKQIH   
Sbjct: 391 YNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSS-QLAIELSKQIHGLI 449

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           IK+ T  D + ++ALIDVY +   + +A+ +F      D+  WN+MIFG+  +    +A+
Sbjct: 450 IKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAI 509

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           +LF+ +  SG   +E T    V     L  +  G+Q HA+ +K+G + D  VS+ ++DMY
Sbjct: 510 KLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMY 569

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG + + + +F      D + W +MI+    +G  + AL ++  M  + V P+  TF 
Sbjct: 570 AKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFV 629

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A +    + +G   H N +K +   +P +    S+V+++ + G +  A    ++M 
Sbjct: 630 GVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMP 688

Query: 656 MRN-TVLWNAMLVGLAQHGNGE 676
           ++    +W ++L      GN E
Sbjct: 689 IKPAAAVWRSLLSACHLFGNAE 710



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/586 (22%), Positives = 248/586 (42%), Gaps = 82/586 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR    +  + LG+  H   +      + ++   L+ +Y++ G +  A  +F  +P R
Sbjct: 125 SVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVR 184

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++WN+++  YA  G G          LF  +        R  LA  +  C + G++  
Sbjct: 185 TPVTWNTVITGYAQIGCGGV-----ALELFDRMGIEGVRPDRFVLASAVSACSALGFLEG 239

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HGYA +     D  V   L+++Y K  ++  A+ LFD M+ R++V W  M+  Y +
Sbjct: 240 GRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQ 299

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLL----YN 292
           N F  E   +F ++ ++G  PD  +   +L     L    +  Q+ A+ IK  L    Y 
Sbjct: 300 NSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYV 359

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            N+                        + + +N  + GY +  D   A+  F  M   ++
Sbjct: 360 KNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSL 419

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
           +   +TF+  L   +    + L +QIHG  +KSG    +   ++LI++YSK   V     
Sbjct: 420 RPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKT 479

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G+  ++FT  +++  +S+L  
Sbjct: 480 VFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
             H  +Q H   IK     D  VS ALID+Y + G + E   LFE+  G D+  WN+MI 
Sbjct: 540 MFH-GQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMIT 598

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            Y    ++ +AL++F  M  +    + +T    + AC     + +G   H  +MKS +++
Sbjct: 599 TYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDI 657

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           +  +   + +++++ + G +  A+     +P  P    W +++S C
Sbjct: 658 EPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSAC 703



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 54/400 (13%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQW--------------FSILRHAISTSDLLLGK 73
           YRNL S++  +  ++Q S F++ + +  W               SIL    S + +  G+
Sbjct: 284 YRNLVSWTTMISGYMQNS-FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGR 342

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
             HA ++ +    D ++ N L+ MY++C  L  AR +FD + + D IS+N+++  Y+ + 
Sbjct: 343 QIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNR 402

Query: 134 E-GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           +   A N+ +  R F SLR S+     LT   LL +  S   +  S+ +HG  +K G   
Sbjct: 403 DLAEAVNIFQRMRFF-SLRPSL-----LTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSL 456

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D + + AL+++YSK   + +AK +F+ +  +D+V+W  M+  +A+N  GEE   LF  L 
Sbjct: 457 DLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLL 516

Query: 253 RSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIKLLLYNN------------------ 293
            SG+ P++ +   ++ V S L    H +Q  A+ IK  + N+                  
Sbjct: 517 LSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIK 576

Query: 294 ----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       +V+ WN  ++ Y Q G    A++ F  M  + V+ + VTF+  L+A A
Sbjct: 577 EGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACA 636

Query: 344 GTDNLNLGQQIHGTTLKSGF--YSAVIVGNSLINMYSKMG 381
               +  G   H  ++KS +     +    S++N++ + G
Sbjct: 637 HAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSG 675


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/720 (32%), Positives = 382/720 (53%), Gaps = 96/720 (13%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N  ++V W+  +S +        AI  F++M+      +   F   + A +  +   +G+
Sbjct: 107 NKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGE 166

Query: 353 QIHGTTLKSGFYSA-VIVGNSLINMYSK-------------------------------- 379
            I+G  +K+G+  A V VG  LI+M+ K                                
Sbjct: 167 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQ 226

Query: 380 MGC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +GC            + G   D+FT +SVL A + L   L L KQ+H   I+     D  
Sbjct: 227 LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL-LALGKQLHSRVIRLGLALDVC 285

Query: 428 VSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-ALELFSHM 483
           V  +L+D+Y +   +GS+ ++  +FE     ++ +W A+I  Y+ S    K A+ELF  M
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
            +   R +  + ++ +KACG L     G+Q+++YA+K G     CV + ++ MY + G M
Sbjct: 346 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 405

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA+  F+ +   + V++  ++ G   N + + A  +++++  +G+    FTFA L+  +
Sbjct: 406 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 465

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + + A+ +G QIH  L+K    S+  +  +L+ MY++CGNIE A+ +F +M+ RN + W 
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 525

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           +M+ G A+HG     L++F  M   G +P+ +T++ VLSACS+ G++SE  ++F+ M ++
Sbjct: 526 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 585

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           +GI P +EHY+ +VD LGR+G   EA E I SMP  A A + R LLGACRV G+TE G+ 
Sbjct: 586 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 645

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------ 831
            AE ++  EP D +AY+LLSN+ A+A QW DV   R  MK +N+ K+             
Sbjct: 646 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 705

Query: 832 -----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                      A  I+ +++ L  +IKE GY+PDTDFVL D+EEE+KE+ L+ HSEK+A 
Sbjct: 706 RFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAV 765

Query: 881 AYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           A+GLIST  S  I                      + +E +   +NRFHH+++G+C C D
Sbjct: 766 AFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 825



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 271/600 (45%), Gaps = 87/600 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-R 117
           +L+  I   +  LGK  H +++ S    D  + N L+++YS+CG    AR +F+ M + R
Sbjct: 50  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 109

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SW+++++ +A     N     +    F  + E   + +    A +++ C ++ Y W 
Sbjct: 110 DLVSWSAMVSCFA-----NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 164

Query: 178 SETVHGYALKIG-LVWDEFVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            E ++G+ +K G L  D  V   L++++ K  G +  A  +FD M ER++V W +M+  +
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN- 293
           A+ G   +   LF+D+  SG  PD  +   VL   ++LG     +Q+ +  I+L L  + 
Sbjct: 225 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284

Query: 294 ------------------------------NSNVVLWNKKLSGYLQVGD-NHGAIECFVN 322
                                           NV+ W   ++ Y+Q G+ +  AIE F  
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 344

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           MI  +++ +  +F   L A     +   G+Q++   +K G  S   VGNSLI+MY++ G 
Sbjct: 345 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 404

Query: 383 V-------------------------------------------CGLRTDQFTLASVLRA 399
           +                                            G+    FT AS+L  
Sbjct: 405 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 464

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           ++S+   +   +QIH   +K    ++  +  ALI +Y R G++  A  +F   +  ++ +
Sbjct: 465 AASIG-AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 523

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYA 518
           W +MI G+     + +ALE+F  M  +G + +EIT    + AC  + M+ +G K  ++  
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            + G    +   + ++D+  + G +V+A    N +P   D + W T++  C  +G  +L 
Sbjct: 584 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 643



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 236/513 (46%), Gaps = 52/513 (10%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N N      +L   L VG  H A      M + N   D  T+ + L +     N  LG+ 
Sbjct: 6   NPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKL 65

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CVC--- 384
           +H   ++SG     +V N+LI++YSK G                          C     
Sbjct: 66  VHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS 125

Query: 385 ---------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFV 428
                          G   +++  A+V+RA S+      + + I+   +K   + AD  V
Sbjct: 126 MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAW-VGEIIYGFVVKTGYLEADVCV 184

Query: 429 STALIDVYCR-NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
              LID++ + +G +  A  +F+     +L TW  MI  +     +  A++LF  M  SG
Sbjct: 185 GCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSG 244

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---GAMV 544
              D  T ++ + AC  L +L  GKQ+H+  ++ G  LD+CV   ++DMY KC   G++ 
Sbjct: 245 YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVD 304

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL-ALSIYHQMRLSGVVPDEFTFAILVKAS 603
           D++ +F  +P  + ++WT +I+  V +GE D  A+ ++ +M    + P+ F+F+ ++KA 
Sbjct: 305 DSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 364

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
             L+    G Q+++  +KL  +S   VG SL+ MYA+ G +EDA   F  +  +N V +N
Sbjct: 365 GNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYN 424

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           A++ G A++   EE   LF ++   G+   + TF  +LS  +  G + +  E  H    K
Sbjct: 425 AIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG-EQIHGRLLK 483

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            G +      + L+    R G  + A ++   M
Sbjct: 484 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 516



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 162/328 (49%), Gaps = 36/328 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC---GSLVYARRLFDKM 114
           S+L        L LGK  H+R++      D  +  +L+ MY++C   GS+  +R++F++M
Sbjct: 254 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 313

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+ +++SW +I+ AY  SGE + E +     LF  +       +  + + +LK C +   
Sbjct: 314 PEHNVMSWTAIITAYVQSGECDKEAI----ELFCKMISGHIRPNHFSFSSVLKACGNLSD 369

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            +  E V+ YA+K+G+     V  +L+++Y++ G++ +A+  FD + E+++V +  ++  
Sbjct: 370 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 429

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------ 287
           YA+N   EE F LF ++  +G+     +   +L   + +G   + EQ+    +K      
Sbjct: 430 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 489

Query: 288 -------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                  + +Y+                + NV+ W   ++G+ + G    A+E F  M+ 
Sbjct: 490 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 549

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +  + + +T++  L+A +    ++ GQ+
Sbjct: 550 TGTKPNEITYVAVLSACSHVGMISEGQK 577



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 12/239 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HFS SS       +L+   + SD   G+  ++  +         + N+L++MY+R 
Sbjct: 350 IRPNHFSFSS-------VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 402

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G +  AR+ FD + +++L+S+N+I+  YA + +       E F LF  + ++    S  T
Sbjct: 403 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE-----EAFLLFNEIADTGIGISAFT 457

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    S G +   E +HG  LK G   ++ +  AL+++YS+ G I  A  +F+ M+
Sbjct: 458 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 517

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +R+V+ W  M+  +A++GF      +F  +  +G  P++ +   VL   S +G   E Q
Sbjct: 518 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 576


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 274/873 (31%), Positives = 423/873 (48%), Gaps = 139/873 (15%)

Query: 175 VWASETVHGYALKIGLVWDEFVSGAL---VNIYSKFGKIREAKF-----LFDGMQERDVV 226
           VW  +++  + LK  +  +E   G L     IY  FG    ++      LFD   +RD  
Sbjct: 7   VWRPQSLENFKLKFCIYANEL--GNLKPNFRIYC-FGAASSSRLYYAHNLFDKSPDRDRE 63

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYA 285
            +  +L  ++ +G  +E   LF+++   G+  D      VL V + L  +    Q+    
Sbjct: 64  SYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 123

Query: 286 IKLLLYNNNS----------------------------NVVLWNKKLSGYLQVGDNHGAI 317
           IK    ++ S                            NVV W   +SGY +   N   +
Sbjct: 124 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVL 183

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F+ M     Q +S TF  AL  +A       G Q+H   +K+G    + V NSLIN+Y
Sbjct: 184 TLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 243

Query: 378 SKMGCV---------------------------CGL----------------RTDQFTLA 394
            K G V                            GL                R  + + A
Sbjct: 244 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFA 303

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S+++  ++L E L  ++Q+H   +K   V D  + TAL+  Y +  +M +A  LF+ + G
Sbjct: 304 SIIKLCANLKE-LRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFK-ETG 361

Query: 455 F--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           F  ++ +W AMI G++ ++   +A+ LFS M   G R +E T +  + A    L +    
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA----LPVISPS 417

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           ++HA  +K+ +E    V + +LD YVK G + +A  +F+ I   D VAW+ M++G    G
Sbjct: 418 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAG 477

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIHANLIKLDCSSDPFVG 631
           E + A+ I+ ++   GV P+EFTF+ ++   +  TA + QG+Q H   IK    S   V 
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVS 537

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +L+ MYAK G+IE A  +FK+   ++ V WN+M+ G AQHG   + L +F++MK   V+
Sbjct: 538 SALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 597

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
            DSVTFIGV +AC++ GLV E  + F +M     I P  EH S +VD   RAG+ ++A +
Sbjct: 598 MDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 657

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           +I +MP  A +++ R +L ACRV   TE G+  AEK++A+ P DS+AYVLLSN++A +  
Sbjct: 658 VIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGD 717

Query: 812 WDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKE 848
           W +    R  M  +NVKK+P                        D I+ K+E L  R+K+
Sbjct: 718 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKD 777

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVIL-------------- 894
            GY PDT +VL D+++E KE  L  HSE+LA A+GLI+TP  S +L              
Sbjct: 778 LGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVV 837

Query: 895 -------SNKEPLY--ANRFHHL-RDGMCPCAD 917
                    +E +   +NRFHH   DG+C C D
Sbjct: 838 IKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 870



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 146/639 (22%), Positives = 276/639 (43%), Gaps = 100/639 (15%)

Query: 10  KPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL 69
           + R  +T ++F  F++D  R   +  L    FL   H       S + S+L+ + +  D 
Sbjct: 60  RDRESYTSLLFG-FSRDG-RTQEATRL----FLNIQHLGMEMDCSIFSSVLKVSATLCDE 113

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           L G+  H + +    + D  +  +L+  Y +  +    R +FD+M +R++++W ++++ Y
Sbjct: 114 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGY 173

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           A     N+ N  E   LF  +++  T  +  T A  L +    G       VH   +K G
Sbjct: 174 AR----NSLN-EEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L     VS +L+N+Y K G +R+A+ LFD  + + VV W  M+  YA NG   E   +F 
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-LLYNNN------------- 294
            +  + +   + S   ++ + ++L + R  EQ+    +K   +++ N             
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348

Query: 295 ---------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           NVV W   +SG+LQ      A+  F  M R  V+ +  T+ V L
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------- 383
            A+          ++H   +K+ +  +  VG +L++ Y K+G V                
Sbjct: 409 TALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV 464

Query: 384 ---------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                                       G++ ++FT +S+L   ++    +   KQ H  
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGF 524

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           AIK+   +   VS+AL+ +Y + G +  AE +F+ +   DL +WN+MI GY     + KA
Sbjct: 525 AIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 584

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS------ 530
           L++F  M     ++D +T      AC    ++++G++     ++     D  ++      
Sbjct: 585 LDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVR-----DCKIAPTKEHN 639

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
           S ++D+Y + G +  A  + +++P       W T+++ C
Sbjct: 640 SCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAAC 678


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 233/722 (32%), Positives = 359/722 (49%), Gaps = 90/722 (12%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A +L       N V WN  L+GY Q+GD    ++ F  M     ++   T    L   A 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------- 384
           T +L  G+ +H   L+SG      +G SL++MYSK G V                     
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G R +QFTL+S++  ++++ + L   + IH    K  
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD-LRYGQSIHGCICKYG 182

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
             +D+ VS  LI +Y ++  + +   +FE     DL +WNA++ G+  S    +   +F 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M   G + +  T  + +++C  LL  + GKQ+HA+ +K+  + D  V + ++DMY K  
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            + DA   F+ +   D  +WT +ISG     + + A+  + QM+  G+ P+E+T A  + 
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
             S +  LE GRQ+HA  +K     D FVG +LVD+Y KCG +E A  +FK +  R+ V 
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WN ++ G +QHG GE+ L+ F  M + G+ PD  TFIGVLSACS+ GLV E  + F  M 
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
           + YGI P +EHY+ +VD LGRAG+  E    I  M     + +   +LGAC++ G+ + G
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------- 832
           +  A+KL  +EP   S+Y+LLSNIFA+  +WDDV + R  M  + +KK+P          
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQ 602

Query: 833 --------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                           I+AK++ L + +   GYVP T+ VL +V  +EK   LYYHSE+L
Sbjct: 603 VHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERL 662

Query: 879 ARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPC 915
           A ++ L+ST     I                     ++N+E +  +  RFHH + G C C
Sbjct: 663 ALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSC 722

Query: 916 AD 917
            D
Sbjct: 723 QD 724



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 240/549 (43%), Gaps = 88/549 (16%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           A RLF  MP+++ +SWN++L  YA  G+G      +  +LF  ++E  T  S+ TL+ +L
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGK-----KVLKLFCKMKECETKFSKFTLSTVL 58

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           K C ++G +   + +H  AL+ G   DEF+  +LV++YSK G + +A  +F  ++  DVV
Sbjct: 59  KGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVV 118

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYA 285
            W  M+    + G G+E   LF  + R G  P+  ++  ++   +++G  R+ + +    
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178

Query: 286 IK-------------LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAI 317
            K             +++Y                 N ++V WN  LSG+          
Sbjct: 179 CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGP 238

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  M+    + +  TF+  L + +   +   G+Q+H   +K+       VG +L++MY
Sbjct: 239 RIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMY 298

Query: 378 SKMGCV-------------------------------------------CGLRTDQFTLA 394
           +K  C+                                            G++ +++TLA
Sbjct: 299 AKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLA 358

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S L   S +   L   +Q+H  A+K     D FV +AL+D+Y + G M  AE +F+    
Sbjct: 359 SCLSGCSHMAT-LENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLIS 417

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            D+ +WN +I GY       KALE F  M + G   DE T    + AC  + ++++GK+ 
Sbjct: 418 RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKR 477

Query: 515 -----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
                  Y +    E   C    ++D+  + G   + +    ++   P  + W T++  C
Sbjct: 478 FDSMSKIYGINPSIEHYAC----MVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533

Query: 569 VDNGEEDLA 577
             +G  D  
Sbjct: 534 KLHGNVDFG 542



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 136/264 (51%)

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M  AE LF      +  +WNA++ GY    +  K L+LF  M     +  + T++T +K 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C     L++GK +HA A++SG E+D  +   ++DMY KCG + DA  +F  I  PD VAW
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           + MI+G    G    A  ++H MR  G  P++FT + LV  ++ +  L  G+ IH  + K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               SD  V   L+ MY K   +ED   +F+ M   + V WNA+L G           ++
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 682 FEDMKAHGVEPDSVTFIGVLSACS 705
           F  M   G +P+  TFI VL +CS
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCS 264



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 11/237 (4%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S+LR   S  D   GK  HA I+ +S   D F+   L+ MY++   L  A   FD++ 
Sbjct: 256 FISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLV 315

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +RD+ SW  I++ YA + +  AE   + FR  +  RE I   +  TLA  L  C     +
Sbjct: 316 NRDIFSWTVIISGYAQTDQ--AEKAVKYFRQMQ--REGIK-PNEYTLASCLSGCSHMATL 370

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +H  A+K G   D FV  ALV++Y K G +  A+ +F G+  RD+V W  ++  Y
Sbjct: 371 ENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGY 430

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQAYAI 286
           +++G GE+    F  +   G+ PD+ +   VL   S +G      KR +   + Y I
Sbjct: 431 SQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGI 487



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           +E A  LF  M  +N V WNA+L G AQ G+G++ LKLF  MK    +    T   VL  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           C+ TG + E  +  H +  + G E +      LVD   + G   +A
Sbjct: 61  CANTGSLREG-KVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA 105


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 253/853 (29%), Positives = 394/853 (46%), Gaps = 128/853 (15%)

Query: 160 LTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           L  A  L+ C  +G  W     +H  A+  GL  D  V   L+++YSK G +  A+ +F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD---LGK 275
            +  RD V W  ML  YA+NG GEE   L+  +HR+G+ P    +  VL   +      +
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161

Query: 276 RHEEQVQAY--------------------------AIKLLLYNNNSNVVLWNKKLSGYLQ 309
                 Q Y                          A ++     + + V +N  +SG+ Q
Sbjct: 162 GRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQ 221

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 A+E F  M  S +  D VT    LAA A   +L  G Q+H    K+G  S  I+
Sbjct: 222 CAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIM 281

Query: 370 GNSLINMYSKMGCV-------------------------------------------CGL 386
             SL+++Y K G V                                            G+
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGI 341

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R +QFT   +LR  +   E + L +QIH  ++K    +D +VS  LID+Y + G + +A 
Sbjct: 342 RPNQFTYPCILRTCTCTGE-IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            + E     D+ +W +MI GY+       AL  F  M   G   D I +A+A+  C  + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIK 460

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++QG Q+HA    SG+  D+ + + ++++Y +CG + +A S F +I   D++ W  ++S
Sbjct: 461 AMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G  + AL ++ +M  SGV  + FTF   + AS+ L  ++QG+QIHA +IK   S 
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           +  VG +L+ +Y KCG+ EDA + F +M  RN V WN ++   +QHG G E L  F+ MK
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK 640

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+              SY          F  M +KYGI P  +HY+ ++D  GRAG+ 
Sbjct: 641 KEGL--------------SY----------FKSMSDKYGIRPRPDHYACVIDIFGRAGQL 676

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
             A + +  MP  A A + R LL AC+V  + E G+  A+ L+ LEP DS++YVLLSN +
Sbjct: 677 DRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAY 736

Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
           A   +W +    R  M+ + V+K+P                       A+ I+  +  + 
Sbjct: 737 AVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 796

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-------SSVILSN 896
            R+ + GY  +   +  D E+E ++     HSEKLA  +GL+S PP        ++ +  
Sbjct: 797 DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRVEK 856

Query: 897 KEPLYANRFHHLR 909
              LY N  H  R
Sbjct: 857 YTSLYVNFLHQKR 869



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 182/730 (24%), Positives = 326/730 (44%), Gaps = 110/730 (15%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA+ +      DR + N L+ +YS+ G ++ ARR+F+++  RD +SW ++L+ YA +G G
Sbjct: 65  HAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E   L+R +  +    +   L+ +L  C  +       +VH    K G   + F
Sbjct: 125 E-----EALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETF 179

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  AL+ +Y + G  R A+ +F  M  RD V +  ++  +A+   GE    +F ++  SG
Sbjct: 180 VGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSG 239

Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------------------------L 288
           L PD  ++  +L   + LG   +  Q+ +Y  K                          L
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL 299

Query: 289 LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           +++N  N +NVVLWN  L  + Q+ D   + E F  M  + ++ +  T+   L     T 
Sbjct: 300 VIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTG 359

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
            ++LG+QIH  ++K+GF S + V   LI+MYSK G +                       
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 384 --------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                               CG+  D   LAS +   + + + +    QIH     +   
Sbjct: 420 GYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI-KAMRQGLQIHARVYVSGYS 478

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            D  +  AL+++Y R G + EA   FE  +  D  TWN ++ G+  S    +AL++F  M
Sbjct: 479 GDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRM 538

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             SG + +  T  +A+ A   L  +KQGKQ+HA  +K+G   +  V + ++ +Y KCG+ 
Sbjct: 539 DQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSF 598

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA+  F+++   ++V+W T+I+ C  +G    AL  + QM+  G+              
Sbjct: 599 EDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL-------------- 644

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLW 662
           S   ++     I        C         ++D++ + G ++ A    ++M +  + ++W
Sbjct: 645 SYFKSMSDKYGIRPRPDHYAC---------VIDIFGRAGQLDRAKKFVEEMPIAADAMVW 695

Query: 663 NAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
             +L     H N   GE   K   +++ H    DS +++ + +A + TG  +   +   +
Sbjct: 696 RTLLSACKVHKNIEVGELAAKHLLELEPH----DSASYVLLSNAYAVTGKWANRDQVRKM 751

Query: 720 MREKYGIEPE 729
           MR++ G+  E
Sbjct: 752 MRDR-GVRKE 760



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 160/703 (22%), Positives = 286/703 (40%), Gaps = 124/703 (17%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+S HA+        + F+ N L+T+Y RCGS   A R+F  MP RD +++N++++ +A 
Sbjct: 162 GRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQ 221

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
              G          +F  ++ S      +T++ LL  C S G +     +H Y  K G+ 
Sbjct: 222 CAHGE-----HALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMS 276

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D  + G+L+++Y K G +  A  +F+     +VVLW ++L A+ +     + F LF  +
Sbjct: 277 SDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQM 336

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK------------------- 287
             +G+ P+  +  C+L   +     DLG    EQ+ + ++K                   
Sbjct: 337 QTAGIRPNQFTYPCILRTCTCTGEIDLG----EQIHSLSVKTGFESDMYVSGVLIDMYSK 392

Query: 288 ---------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                    +L      +VV W   ++GY+Q      A+  F  M +  +  D++    A
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASA 452

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
           ++  AG   +  G QIH     SG+   V + N+L+N+Y++ G +               
Sbjct: 453 ISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE 512

Query: 384 ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G++ + FT  S L AS++L E +   KQIH 
Sbjct: 513 ITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE-IKQGKQIHA 571

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             IK     ++ V  ALI +Y + GS  +A+  F      +  +WN +I          +
Sbjct: 572 RVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLE 631

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-AYAMKSGFELDLCVSSGIL 534
           AL+ F  M   G                    L   K M   Y ++   +   CV    +
Sbjct: 632 ALDFFDQMKKEG--------------------LSYFKSMSDKYGIRPRPDHYACV----I 667

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-VDNGEEDLALSIYHQMRLSGVVPD 592
           D++ + G +  A+    ++P A D + W T++S C V    E   L+  H + L     D
Sbjct: 668 DIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEP--HD 725

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
             ++ +L  A +         Q+   +       +P  G S +++     N+  A+ +  
Sbjct: 726 SASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEP--GRSWIEV----KNVVHAFFVGD 779

Query: 653 QMDMRNTVLWNAMLV---GLAQHGNGEETLKLFEDMKAHGVEP 692
           ++      ++N + V    +A+ G  +E   LF D +  G +P
Sbjct: 780 RLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDP 822



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 135/244 (55%), Gaps = 1/244 (0%)

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHAYAMKSGFE 524
           G++   +  K L LF+        L  +  A A++AC G     +   ++HA A+  G  
Sbjct: 15  GFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRGLG 74

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D  V + ++D+Y K G ++ A+ +F ++ A D+V+W  M+SG   NG  + AL +Y QM
Sbjct: 75  KDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQM 134

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
             +GVVP  +  + ++ + +      QGR +HA   K    S+ FVG +L+ +Y +CG+ 
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSF 194

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             A  +F  M  R+TV +N ++ G AQ  +GE  L++FE+M++ G+ PD VT   +L+AC
Sbjct: 195 RLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAAC 254

Query: 705 SYTG 708
           +  G
Sbjct: 255 ASLG 258



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 173/353 (49%), Gaps = 34/353 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S  DL  G   H+ +  +    D  +  +L+ +Y +CG +  A  +F+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++ WN IL A+     G   ++ + F LF  ++ +    ++ T   +L+ C  +G +  
Sbjct: 309 NVVLWNLILVAF-----GQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDL 363

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H  ++K G   D +VSG L+++YSK+G + +A+ + + ++E+DVV W  M+  Y +
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQA------YAIKLLL 290
           + + ++    F ++ + G+ PD+  +   + G       R   Q+ A      Y+  + +
Sbjct: 424 HEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI 483

Query: 291 YNNNSNV----------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +N   N+                      + WN  +SG+ Q G +  A++ F+ M +S V
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           +++  TF+ AL+A A    +  G+QIH   +K+G      VGN+LI++Y K G
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCG 596


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 247/713 (34%), Positives = 364/713 (51%), Gaps = 96/713 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   L+GY+Q G     +E F  M    V  +SVTF   L+ VA    ++LG+++H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------CGLRT-------------------- 388
             ++K G  S V V NSL+NMY+K G V       CG+ T                    
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 389 ----------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                            Q T A+V++  +++ + L L++Q+H   +K    +   V TAL
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQ-LGLARQLHSSVLKRGFHSYGNVMTAL 347

Query: 433 IDVYCRNGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           +D Y + G +  A  +F    G  ++ +W AMI G I + +   A  LFS M   G   +
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           + T +T + A    L      Q+HA  +K+ +E    V + +L  Y K     +A SIF 
Sbjct: 408 DFTYSTILTASVASL----PPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFK 463

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LE 610
            I   D V+W+ M++     G+ D A +I+ +M + G+ P+EFT + ++ A +  TA ++
Sbjct: 464 MIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVD 523

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            GRQ HA  IK  C     V  +LV MYA+ G+IE A  +F++   R+ V WN+ML G A
Sbjct: 524 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYA 583

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           QHG  ++ L +F  M+A G+E D VTF+ V+  C++ GLV E    F  M   YGI P +
Sbjct: 584 QHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTM 643

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +VD   RAG+  EA  LI  M F A   + R LLGAC+V  + E GK  AEKL++
Sbjct: 644 EHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLS 703

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------- 831
           LEPFDS+ YVLLSNI++AA +W +    R  M  K VKK+                    
Sbjct: 704 LEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDK 763

Query: 832 ----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               ++ I+AK+  +  ++K+ GY PDT F L +V EE+KE  L  HSE+LA A+GLI+T
Sbjct: 764 SHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIAT 823

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           PP + +                     + ++E +    +RFHH   G+C C D
Sbjct: 824 PPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGD 876



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 256/588 (43%), Gaps = 89/588 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQ-IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +L+   S  D +LGK  H   +       D  +  +L+ MY +  S+V  R++F+ MP R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++++W S+L  Y   G      +++   LF  +R    + + +T A +L +  S G V  
Sbjct: 169 NVVTWTSLLTGYIQDGA-----LSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDL 223

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VH  ++K G     FV  +L+N+Y+K G + EA+ +F GM+ RD+V W  ++     
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL 283

Query: 238 NGFGEEVFHLFVD-------------------------------LHRSGLCPDDESVQCV 266
           NG   E   LF D                               LH S L     S   V
Sbjct: 284 NGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNV 343

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           +  + D   +  +   A  I  LL + + NVV W   ++G +Q GD   A   F  M   
Sbjct: 344 MTALMDAYSKAGQLGNALDI-FLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRED 402

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---- 382
            V  +  T+   L A   +    L  QIH   +K+ +    IVG +L+  YSK+ C    
Sbjct: 403 GVAPNDFTYSTILTASVAS----LPPQIHAQVIKTNYECTSIVGTALLASYSKL-CNTEE 457

Query: 383 --------------------VC--------------------GLRTDQFTLASVLRASSS 402
                                C                    GL+ ++FT++SV+ A +S
Sbjct: 458 ALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACAS 517

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
              G+ L +Q H  +IK+       VS+AL+ +Y R GS+  A+ +FE +   DL +WN+
Sbjct: 518 PTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNS 577

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKS 521
           M+ GY     S KAL++F  M   G  +D +T  + +  C    ++++G++   + A   
Sbjct: 578 MLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDY 637

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           G    +   + ++D+Y + G + +A S+   +  P   + W T++  C
Sbjct: 638 GITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGAC 685



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 166/321 (51%), Gaps = 3/321 (0%)

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           T +  +F +    + H+AL+ F  +H   G R+    +   +K CG +     GKQ+H  
Sbjct: 69  TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGL 128

Query: 518 AMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            ++ G +  D+ V + ++DMY+K  ++VD + +F  +P  + V WT++++G + +G    
Sbjct: 129 CIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSD 188

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
            + ++ +MR  GV P+  TFA ++   +    ++ GR++HA  +K  C S  FV  SL++
Sbjct: 189 VMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMN 248

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCG +E+A ++F  M+ R+ V WN ++ GL  +G+  E L+LF D ++        T
Sbjct: 249 MYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQST 308

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           +  V+  C+    +  A +  H    K G        + L+DA  +AG+   A ++ L M
Sbjct: 309 YATVIKLCANIKQLGLARQ-LHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLM 367

Query: 757 PFEASASMHRALLGACRVQGD 777
               +     A++  C   GD
Sbjct: 368 SGSQNVVSWTAMINGCIQNGD 388



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 168/321 (52%), Gaps = 3/321 (0%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK-NDTVADSFVSTALIDVYCRNGSMA 443
           G R     L  VL+   S+P+ + L KQ+H   I+      D  V T+L+D+Y +  S+ 
Sbjct: 98  GGRVGGGALVGVLKVCGSVPDRV-LGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVV 156

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +   +FE     ++ TW +++ GYI        +ELF  M   G   + +T A+ +    
Sbjct: 157 DGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVA 216

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
              M+  G+++HA ++K G    + V + +++MY KCG + +A+ +F  +   D V+W T
Sbjct: 217 SQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNT 276

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           +++G V NG +  AL ++H  R S  +  + T+A ++K  + +  L   RQ+H++++K  
Sbjct: 277 LMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRG 336

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMD-MRNTVLWNAMLVGLAQHGNGEETLKLF 682
             S   V  +L+D Y+K G + +A  +F  M   +N V W AM+ G  Q+G+      LF
Sbjct: 337 FHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALF 396

Query: 683 EDMKAHGVEPDSVTFIGVLSA 703
             M+  GV P+  T+  +L+A
Sbjct: 397 SRMREDGVAPNDFTYSTILTA 417


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 255/855 (29%), Positives = 407/855 (47%), Gaps = 129/855 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L      +++  G+  H  ++      + +    L+ MY++C  +  ARR+F+ + D +
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + W  + + Y  +G        E   +F  +R+                          
Sbjct: 226 TVCWTCLFSGYVKAGLPE-----EAVLVFERMRDE------------------------- 255

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
                     G   D      ++N Y + GK+++A+ LF  M   DVV W VM+  + + 
Sbjct: 256 ----------GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR 305

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN 293
           G        F ++ +S +     ++  VL  I      DLG      V A AIKL L +N
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL----VVHAEAIKLGLASN 361

Query: 294 ----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         N V WN  + GY   G++H  +E F++M  
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
           S    D  TF   L+  A + +L +G Q H   +K      + VGN+L++MY+K G +  
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481

Query: 384 -----------------------------------------CGLRTDQFTLASVLRASSS 402
                                                    CG+ +D   LAS L+A + 
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           +  GL+  KQ+H  ++K     D    ++LID+Y + G + +A  +F +   + + + NA
Sbjct: 542 V-HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I GY   NN  +A+ LF  M T G    EIT AT V+AC     L  G Q H    K G
Sbjct: 601 LIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659

Query: 523 FELD---LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLAL 578
           F  +   L +S  +L MY+    M +A ++F+++ +P  +  WT M+SG   NG  + AL
Sbjct: 660 FSSEGEYLGIS--LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
             Y +MR  GV+PD+ TF  +++  S L++L +GR IH+ +  L    D     +L+DMY
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777

Query: 639 AKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           AKCG+++ +  +F +M  R N V WN+++ G A++G  E+ LK+F+ M+   + PD +TF
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +GVL+ACS+ G VS+  + F +M  +YGIE  V+H + +VD LGR G  +EA + I +  
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            +  A +  +LLGACR+ GD   G+  AEKL+ LEP +SSAYVLLSNI+A+   W+   +
Sbjct: 898 LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 957

Query: 818 ARGEMKRKNVKKDPA 832
            R  M+ + VKK P 
Sbjct: 958 LRKVMRDRGVKKVPG 972



 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 205/682 (30%), Positives = 339/682 (49%), Gaps = 59/682 (8%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L +GK+ H++ L      +  L N ++ +Y++C  + YA + FD + ++D+ +WNS+L+ 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y+  G+       +  R F SL E+  F ++ T + +L  C     V     +H   +K+
Sbjct: 135 YSSIGKPG-----KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GL  + +  GALV++Y+K  +I +A+ +F+ + + + V W  +   Y + G  EE   +F
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +   G  PD  +   V+     LGK  + ++      L    ++ +VV WN  +SG+ 
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL------LFGEMSSPDVVAWNVMISGHG 303

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G    AIE F NM +S+V+    T    L+A+    NL+LG  +H   +K G  S + 
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363

Query: 369 VGNSLINMYSKMGCV-------------------------------------------CG 385
           VG+SL++MYSK   +                                            G
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
              D FT  S+L ++ +    L +  Q H   IK     + FV  AL+D+Y + G++ +A
Sbjct: 424 YNIDDFTFTSLL-STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +FE     D  TWN +I  Y+   N  +A +LF  M+  G   D   +A+ +KAC  +
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L QGKQ+H  ++K G + DL   S ++DMY KCG + DA+ +F+ +P    V+   +I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G   N  E+ A+ ++ +M   GV P E TFA +V+A     +L  G Q H  + K   S
Sbjct: 603 AGYSQNNLEE-AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661

Query: 626 SD-PFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFE 683
           S+  ++GISL+ MY     + +A  LF ++   ++ VLW  M+ G +Q+G  EE LK ++
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721

Query: 684 DMKAHGVEPDSVTFIGVLSACS 705
           +M+  GV PD  TF+ VL  CS
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCS 743



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 145/611 (23%), Positives = 253/611 (41%), Gaps = 84/611 (13%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F      S  S+ S   S+L      ++L LG   HA  +      + ++ ++L++MYS+
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           C  +  A ++F+ + +++ + WN+++  YAH+GE  +  V E   LF  ++ S       
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE--SHKVME---LFMDMKSSGYNIDDF 429

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   LL  C +S  +      H   +K  L  + FV  ALV++Y+K G + +A+ +F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEE 279
            +RD V W  ++ +Y ++    E F LF  ++  G+  D   +   L   + + G    +
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549

Query: 280 QVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVG 311
           QV   ++K  L  +                              +VV  N  ++GY Q  
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-N 608

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS-AVIVG 370
           +   A+  F  M+   V    +TF   + A    ++L LG Q HG   K GF S    +G
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668

Query: 371 NSLINMYSK---MGCVC-----------------------------------------GL 386
            SL+ MY     M   C                                         G+
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             DQ T  +VLR  S L   L   + IH          D   S  LID+Y + G M  + 
Sbjct: 729 LPDQATFVTVLRVCSVLSS-LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787

Query: 447 YLF-ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
            +F E +   ++ +WN++I GY  +  +  AL++F  M  S    DEIT    + AC   
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847

Query: 506 LMLKQGKQMHAYAM-KSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTT 563
             +  G+++    + + G E  +   + ++D+  + G + +A          PD   W++
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907

Query: 564 MISGCVDNGEE 574
           ++  C  +G++
Sbjct: 908 LLGACRIHGDD 918



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 137/266 (51%), Gaps = 7/266 (2%)

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           L L+ GK +H+ ++  G + +  + + I+D+Y KC  +  A+  F D    D  AW +M+
Sbjct: 74  LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSML 132

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           S     G+    L  +  +  + + P++FTF+I++   +  T +E GRQIH ++IK+   
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            + + G +LVDMYAKC  I DA  +F+ +   NTV W  +  G  + G  EE + +FE M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +  G  PD + F+ V++     G + +A   F  M       P+V  ++ ++   G+ G 
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGC 307

Query: 746 TKEAGELILSMPFEASASMHRALLGA 771
              A E   +M  ++S    R+ LG+
Sbjct: 308 ETVAIEYFFNMR-KSSVKSTRSTLGS 332


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/722 (31%), Positives = 379/722 (52%), Gaps = 101/722 (13%)

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-----NVQYDSVTFLVALAAVAGT 345
           Y +  N+  WN  +S Y++ G  H A+ C VN + S     +++ D  TF   L A    
Sbjct: 79  YIHKKNIFSWNSIISAYVRFGKYHEAMNC-VNQLFSMCGGGHLRPDFYTFPPILKACV-- 135

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------- 383
            +L  G+++H    K GF   V V  SL+++YS+ G +                      
Sbjct: 136 -SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194

Query: 384 ---C------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
              C                  G++ D  T+AS+L   +   + ++    IH+H +K+  
Sbjct: 195 SGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN-GVLIHLHVLKHGL 253

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
            +D FVS ALI++Y + G + +A+ +F+  +  DL +WN++I  Y  +N+   AL  F  
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCG 541
           M   G R D +T+ +       L   +  + +  + ++  + + D+ + + +++MY K G
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILV 600
            M  A ++F+ +P  D ++W T+++G   NG    A+  Y+ M      +P++ T+  ++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A S + AL+QG +IHA LIK     D FV   L+D+Y KCG +EDA  LF ++    +V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WNA++  L  HG GEE L+LF+DM A  V+ D +TF+ +LSACS++GLV E  + F +M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +++YGI+P ++HY  +VD LGRAG  ++A EL+ +MP +  AS+  ALL AC++ G+ E 
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
           G   +++L+ ++  +   YVLLSNI+A   +W+ V   R   + + ++K P         
Sbjct: 614 GTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGS 673

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                            I+ +++ L  ++K  GYVPD  FV  D+EE+EKE+ L  HSE+
Sbjct: 674 KAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSER 733

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCP 914
           LA A+G+ISTPP S I                     +S +E +   +NRFHH +DG+C 
Sbjct: 734 LAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICS 793

Query: 915 CA 916
           CA
Sbjct: 794 CA 795



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 166/319 (52%), Gaps = 9/319 (2%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K++H   +      +  +ST LI++Y  +G ++ +   F+     ++ +WN++I  Y+ 
Sbjct: 38  TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVR 97

Query: 470 SNNSHKAL----ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
               H+A+    +LFS       R D  T    +KAC  L+    GK++H    K GFE 
Sbjct: 98  FGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFED 154

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D+ V++ ++ +Y + G +  A  +F D+P  D  +W  MISG   NG    AL + ++M+
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
             GV  D  T A ++   +    +  G  IH +++K    SD FV  +L++MY+K G ++
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQ 274

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           DA ++F QM++R+ V WN+++    Q+ +    L+ F+ M+  G+ PD +T + + S  S
Sbjct: 275 DAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 706 YTG--LVSEAYENFHLMRE 722
                 +S +   F + RE
Sbjct: 335 QLSDQRISRSILGFVIRRE 353



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 194/439 (44%), Gaps = 64/439 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+  +S  D   GK  H  +       D F+  +L+ +YSR G L  A ++F  MP +D
Sbjct: 130 ILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           + SWN++++ +  +G     N      +   ++        +T+A +L +C  S  V   
Sbjct: 187 VGSWNAMISGFCQNG-----NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H + LK GL  D FVS AL+N+YSKFG++++A+ +FD M+ RD+V W  ++ AY +N
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKL--------- 288
                    F  +   G+ PD  +V  +  + S L  +R    +  + I+          
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361

Query: 289 ----------LLYNNNSNVVL----------WNKKLSGYLQVGDNHGAIECFVNMIRS-- 326
                     L Y N ++ V           WN  ++GY Q G    AI+ + NM+    
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECR 420

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           +   +  T++  + A +    L  G +IH   +K+  Y  V V   LI++Y K    CG 
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK----CGR 476

Query: 387 RTDQFTLASVLRASSSLP---------------EGLHLSKQIHVHAIKNDTVADSFVSTA 431
             D  +L   +   +S+P               E L L K +    +K D +  +FVS  
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI--TFVS-- 532

Query: 432 LIDVYCRNGSMAEAEYLFE 450
           L+     +G + E +  F+
Sbjct: 533 LLSACSHSGLVDEGQKCFD 551



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 134/587 (22%), Positives = 239/587 (40%), Gaps = 93/587 (15%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA +L   +  +  L+  L+ +Y   G +  +R  FD +  +++ SWNSI++AY   
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+ + E +    +LF             T  P+LK C+S   +   + VH    K+G   
Sbjct: 99  GKYH-EAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFED 154

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D FV+ +LV++YS++G +  A  +F  M  +DV  W  M+  + +NG       +   + 
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214

Query: 253 RSGLCPDDESVQCVLGVI-----------------------------------SDLGKRH 277
             G+  D  +V  +L V                                    S  G+  
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQ 274

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           + Q+    +++       ++V WN  ++ Y Q  D   A+  F  M    ++ D +T + 
Sbjct: 275 DAQMVFDQMEV------RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSKMGCV-C----------- 384
             +  +   +  + + I G  ++  +    V++GN+L+NMY+K+G + C           
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388

Query: 385 ---------------GLRTD-----------------QFTLASVLRASSSLPEGLHLSKQ 412
                          GL ++                 Q T  S++ A S +   L    +
Sbjct: 389 DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHV-GALQQGMK 447

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH   IKN    D FV+T LID+Y + G + +A  LF          WNA+I    +   
Sbjct: 448 IHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGR 507

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSS 531
             +AL+LF  M     + D IT  + + AC    ++ +G++      K  G +  L    
Sbjct: 508 GEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYG 567

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            ++D+  + G +  A  +  ++P  PD   W  ++S C   G  +L 
Sbjct: 568 CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELG 614



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 36/327 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL     + D++ G   H  +L      D F++N L+ MYS+ G L  A+ +FD+M  R
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SWNSI+AAY  + +      +   R F+ ++        LT+  L  +         
Sbjct: 287 DLVSWNSIIAAYEQNNDP-----STALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRI 341

Query: 178 SETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           S ++ G+ ++   L  D  +  ALVN+Y+K G +  A  +FD +  +D + W  ++  Y 
Sbjct: 342 SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT 401

Query: 237 ENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN- 293
           +NG   E    +  +       P+  +   ++   S +G   +  ++ A  IK  LY + 
Sbjct: 402 QNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV 461

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                          V WN  ++     G    A++ F +M+  
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            V+ D +TF+  L+A + +  ++ GQ+
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQK 548



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 15/193 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SI+        L  G   HA+++ +S   D F+   L+ +Y +CG L  A  LF ++P
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               + WN+I+A+    G G      E  +LF+ +         +T   LL  C  SG V
Sbjct: 489 RDTSVPWNAIIASLGIHGRGE-----EALQLFKDMLAERVKADHITFVSLLSACSHSGLV 543

Query: 176 WASETVHG-----YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
              +         Y +K  L       G +V++  + G + +A  L   M  + D  +W 
Sbjct: 544 DEGQKCFDIMQKEYGIKPSLKH----YGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599

Query: 230 VMLRAYAENGFGE 242
            +L A    G  E
Sbjct: 600 ALLSACKIYGNAE 612



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 9/175 (5%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
           +SC+  +   +++HA L+    S +  +   L+++Y   G+I  +   F  +  +N   W
Sbjct: 30  NSCVN-VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSW 88

Query: 663 NAMLVGLAQHGNGEETL----KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
           N+++    + G   E +    +LF       + PD  TF  +L AC    LV    +  H
Sbjct: 89  NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVDG--KKVH 144

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
               K G E +V   + LV    R G    A ++ + MP +   S +  + G C+
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 241/836 (28%), Positives = 404/836 (48%), Gaps = 116/836 (13%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +L S      F    L+ MY++C  +  ARR+FD +   D I W S++A Y  
Sbjct: 179 GRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHR 238

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G                 ++++   SR+                          K+G  
Sbjct: 239 VGR---------------YQQALALFSRME-------------------------KMGSA 258

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D+     +++  +  G++ +A+ L   +Q    V W  ++ +Y+++G   EVF L+ D+
Sbjct: 259 PDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDM 318

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI------------------------ 286
            R GL P   +   +L   + +    E +Q+ A A+                        
Sbjct: 319 KRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCI 378

Query: 287 ----KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               K+  ++   N+V+WN  L G++Q       I+ F  M R++++ D  TF+  L A 
Sbjct: 379 SDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGAC 438

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
              D+L++G+Q+H  T+K+   + + V N++++MYSK+G +                   
Sbjct: 439 INLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWN 498

Query: 384 -----------------------C-GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                  C G+  D+ + A+ + A S++       KQIH  +IK
Sbjct: 499 ALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNI-RATETGKQIHCASIK 557

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
            +  ++  V ++LID+Y + G +  +  +  + D   +   NA+I G + +N   +A+EL
Sbjct: 558 YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIEL 617

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYV 538
           F  +   G +    T A+ +  C   +    GKQ+H+Y +KS     D  +   ++ +Y+
Sbjct: 618 FQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYL 677

Query: 539 KCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           KC  + DA  +  ++P   + V WT  ISG   NG  D +L ++ +MR   V  DE TFA
Sbjct: 678 KCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFA 737

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DM 656
            ++KA S + AL  G++IH  +IK    S      +L+DMY+KCG++  ++ +FK++ + 
Sbjct: 738 SVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNK 797

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           +N + WN+M+VG A++G   E L LF+ M+   ++PD VT +GVL ACS+ GL+SE    
Sbjct: 798 QNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNL 857

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F  M + YGI P V+HY+ L+D LGR G  +EA E+I  +PF A   +    L AC++  
Sbjct: 858 FDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHK 917

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           D E GK  A+KL+ +EP  SS YV LS++ AAA  W +   AR  M+ K V K P 
Sbjct: 918 DEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPG 973



 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 203/716 (28%), Positives = 328/716 (45%), Gaps = 59/716 (8%)

Query: 76  HARILNSSQIPDR-FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           HAR+L    +P R  L + L+ +Y R G + YA R              +      H+  
Sbjct: 79  HARVLRLG-LPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 135 GNAENVTEGFRLFRSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
           G+  +V + F+    LR SI  T  +  LA +L  C   G +     VH   LK G    
Sbjct: 138 GSPRDVLDAFQ---RLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSS 194

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
            F    LV++Y+K  ++++A+ +FDG+   D + W  M+  Y   G  ++   LF  + +
Sbjct: 195 AFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEK 254

Query: 254 SGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
            G  PD  +   ++  ++ +G+  + +     I++       + V WN  +S Y Q G  
Sbjct: 255 MGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQM------PSTVAWNAVISSYSQSGLE 308

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
                 + +M R  +     TF   L+A A     + GQQIH   +K G  + V VG+SL
Sbjct: 309 SEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSL 368

Query: 374 INMYSKMGCV-------------------------------------------CGLRTDQ 390
           IN+Y K GC+                                             L  D 
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADD 428

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           FT  SVL A  +L + L + +Q+H   IKN   AD FV+ A++D+Y + G++  A+ LF 
Sbjct: 429 FTFVSVLGACINL-DSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFS 487

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
              G D  +WNA+I G   +    +A+ +   M   G   DE++ ATA+ AC  +   + 
Sbjct: 488 LIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATET 547

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GKQ+H  ++K     +  V S ++D+Y K G +  ++ +   + A   V    +I+G V 
Sbjct: 548 GKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQ 607

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPF 629
           N  ED A+ ++ Q+   G  P  FTFA ++   +   +   G+Q+H+  +K    + D  
Sbjct: 608 NNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTS 667

Query: 630 VGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           +GISLV +Y KC  +EDA  L  ++ D +N V W A + G AQ+G  +++L +F  M++H
Sbjct: 668 LGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSH 727

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
            V  D  TF  VL ACS    +++  E  H +  K G        S L+D   + G
Sbjct: 728 DVRSDEATFASVLKACSEIAALTDGKE-IHGLIIKSGFVSYETAASALMDMYSKCG 782



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 164/579 (28%), Positives = 286/579 (49%), Gaps = 51/579 (8%)

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD--GMQERDVVLWKVMLRA 234
           A   +H   L++GL     +  ALV++Y + G++  A                   +L  
Sbjct: 74  ACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSC 133

Query: 235 YAENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK----- 287
           +A +G   +V   F  L  S G  PD   +  VL   S LG   +  QV    +K     
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193

Query: 288 --------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMI 324
                   + +Y     V               + W   ++GY +VG    A+  F  M 
Sbjct: 194 SAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC-- 382
           +     D VT++  ++ +A    L+  +    T LK     + +  N++I+ YS+ G   
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDAR----TLLKRIQMPSTVAWNAVISSYSQSGLES 309

Query: 383 -VCGLRTD---------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
            V GL  D         + T AS+L A++S+       +QIH  A+K+   A+ FV ++L
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASM-TAFDEGQQIHAAAVKHGLDANVFVGSSL 368

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I++Y ++G +++A+ +F+     ++  WNAM++G++ ++   + +++F +M  +    D+
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADD 428

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T  + + AC  L  L  G+Q+H   +K+  + DL V++ +LDMY K GA+  A+++F+ 
Sbjct: 429 FTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSL 488

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           IP  D V+W  +I G   N EE+ A+ +  +M+  G+ PDE +FA  + A S + A E G
Sbjct: 489 IPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETG 548

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +QIH   IK +  S+  VG SL+D+Y+K G++E +  +   +D  + V  NA++ GL Q+
Sbjct: 549 KQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQN 608

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
              +E ++LF+ +   G +P + TF  +LS C  TG VS
Sbjct: 609 NREDEAIELFQQVLKDGFKPSNFTFASILSGC--TGPVS 645



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 267/605 (44%), Gaps = 91/605 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S+L  A S +    G+  HA  +      + F+ ++L+ +Y + G +  A+++F
Sbjct: 326 TRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF 385

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D   +++++ WN++L  +  +     +   E  ++F+ +R +       T   +L  C++
Sbjct: 386 DFSTEKNIVMWNAMLYGFVQN-----DLQEETIQMFQYMRRADLEADDFTFVSVLGACIN 440

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +     VH   +K  +  D FV+ A++++YSK G I  AK LF  +  +D V W  +
Sbjct: 441 LDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNAL 500

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAI---- 286
           +   A N   EE  ++   +   G+ PD+ S    +   S++      +Q+   +I    
Sbjct: 501 IVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNV 560

Query: 287 ------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                                   K+L + + S++V  N  ++G +Q      AIE F  
Sbjct: 561 CSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQ 620

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSK-- 379
           +++   +  + TF   L+   G  +  +G+Q+H  TLKS   +    +G SL+ +Y K  
Sbjct: 621 VLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCK 680

Query: 380 ---------------------MGCVCG---------------------LRTDQFTLASVL 397
                                   + G                     +R+D+ T ASVL
Sbjct: 681 LLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVL 740

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF-ENKDGFD 456
           +A S +   L   K+IH   IK+  V+    ++AL+D+Y + G +  +  +F E K+  +
Sbjct: 741 KACSEIA-ALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQN 799

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-- 514
           +  WN+MI G+  +  +++AL LF  M  S  + DE+T+   + AC    ++ +G+ +  
Sbjct: 800 IMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFD 859

Query: 515 ---HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
                Y +    +   C    ++D+  + G + +AQ + + +P   D V W T ++ C  
Sbjct: 860 SMSQVYGIVPRVDHYAC----LIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQM 915

Query: 571 NGEED 575
           + +E+
Sbjct: 916 HKDEE 920



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 153/342 (44%), Gaps = 40/342 (11%)

Query: 431 ALIDVYCRNGSMAEAEYLFE--NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-G 487
           AL+D+Y R+G +  A              A  ++++  +  S +    L+ F  +  S G
Sbjct: 96  ALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARSGSPRDVLDAFQRLRCSIG 155

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              D+  +A  + AC  L  L+QG+Q+H   +KSGF       +G++DMY KC  + DA+
Sbjct: 156 GTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDAR 215

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ I  PD + W +MI+G    G    AL+++ +M   G  PD+ T+           
Sbjct: 216 RVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTY----------- 264

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
                                   ++++   A  G + DA  L K++ M +TV WNA++ 
Sbjct: 265 ------------------------VTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVIS 300

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             +Q G   E   L++DMK  G+ P   TF  +LSA +      E  +  H    K+G++
Sbjct: 301 SYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEG-QQIHAAAVKHGLD 359

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
             V   S L++   + G   +A + +     E +  M  A+L
Sbjct: 360 ANVFVGSSLINLYVKHGCISDAKK-VFDFSTEKNIVMWNAML 400



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 12/217 (5%)

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN--DIPAPD 557
           +ACG L         HA  ++ G  L   +   ++D+Y + G +  A             
Sbjct: 73  RACGVL---------HARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPAS 123

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIH 616
             A ++++S    +G     L  + ++R S G  PD+F  A+++ A S L ALEQGRQ+H
Sbjct: 124 GAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVH 183

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
            +++K    S  F    LVDMYAKC  ++DA  +F  +   +T+ W +M+ G  + G  +
Sbjct: 184 CDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQ 243

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           + L LF  M+  G  PD VT++ ++S  +  G +S+A
Sbjct: 244 QALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDA 280



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 16/230 (6%)

Query: 11  PRHKHTY---VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTS 67
           P HK+        S + ++ Y +      SL+ F +       S  + + S+L+     +
Sbjct: 693 PDHKNLVEWTATISGYAQNGYSDQ-----SLVMFWRMRSHDVRSDEATFASVLKACSEIA 747

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSIL 126
            L  GK  H  I+ S  +      + LM MYS+CG ++ +  +F ++ ++ +++ WNS++
Sbjct: 748 ALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMI 807

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             +A +G  N     E   LF+ ++ES      +TL  +L  C  +G +     +     
Sbjct: 808 VGFAKNGYAN-----EALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMS 862

Query: 187 KI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           ++ G+V        L+++  + G ++EA+ + D +  R D V+W   L A
Sbjct: 863 QVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAA 912


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 290/977 (29%), Positives = 463/977 (47%), Gaps = 142/977 (14%)

Query: 76   HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
            H +I  +    D F  N L+ ++ R G+LV A++LFD+MP ++L+SW+ +++ YA +G  
Sbjct: 62   HLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMP 121

Query: 136  NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC--LSSGYVWASETVHGYALKIGLVWD 193
            +     E   LFR +  +    +   +   L+ C  L    +     +HG   K     D
Sbjct: 122  D-----EACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASD 176

Query: 194  EFVSGALVNIYSKF-GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
              +S  L+++YS     I +A+ +F+ ++ +    W  ++  Y   G     F LF  + 
Sbjct: 177  MVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQ 236

Query: 253  RSGL---CPDDESVQCVLGVIS----DLGKRHEEQVQAYAIK------------------ 287
            R      C  +E   C L  ++    D G    EQ+ A   K                  
Sbjct: 237  REATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFA 296

Query: 288  ----------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                      +    ++ N V  N  + G  +      A + F  M +  V+ ++ ++ V
Sbjct: 297  RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAV 355

Query: 338  ALAAVAGTDNLN----LGQQIHGTTLKSGFYSA-VIVGNSLINMYSKMGCV--------- 383
             L+A     NL      GQ++H   +++      +++GN+L+N+Y+K   +         
Sbjct: 356  LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 384  ---------------------------C-------GLRTDQFTLASVLRASSSLPEGLHL 409
                                       C       G+   +F++ S L + +SL   + L
Sbjct: 416  MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLG-WIML 474

Query: 410  SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
             +QIH   IK     D  VS AL+ +Y     M E + +F     +D  +WN+ I     
Sbjct: 475  GQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALAT 534

Query: 470  SNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
            S  S  +A++ F  M  +G + + +T    + A   L +L+ G+Q+HA  +K     D  
Sbjct: 535  SEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNA 594

Query: 529  VSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            + + +L  Y KC  M D + IF+ +    D+V+W  MISG + NG    A+ +   M   
Sbjct: 595  IENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQK 654

Query: 588  GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            G   D+FT A ++ A + +  LE+G ++HA  I+    ++  VG +LVDMYAKCG I+ A
Sbjct: 655  GQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYA 714

Query: 648  YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
               F+ M +RN   WN+M+ G A+HG+G + LKLF  MK HG  PD VTF+GVLSACS+ 
Sbjct: 715  SRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHV 774

Query: 708  GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
            GLV E +E+F  M E Y + P +EH+S +VD LGRAG  K+  E I +MP   +A + R 
Sbjct: 775  GLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRT 834

Query: 768  LLGA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
            +LGA CR    +TE G+  A+ L+ LEP ++  YVLLSN+ AA  +W+DV  AR  M+  
Sbjct: 835  ILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNA 894

Query: 826  NVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
             VKK+                         + I+ K++ ++ ++++ GYVP+T + L D+
Sbjct: 895  EVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDL 954

Query: 863  EEEEKERALYYHSEKLARAYGLI--STPPSSVI------------------LSNKEPLY- 901
            E E KE  L YHSEKLA A+ L   S  P  +I                  + N++ +  
Sbjct: 955  ELENKEELLSYHSEKLAIAFVLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILR 1014

Query: 902  -ANRFHHLRDGMCPCAD 917
             +NRFHH   G+C C D
Sbjct: 1015 DSNRFHHFDGGICSCQD 1031



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 175/683 (25%), Positives = 295/683 (43%), Gaps = 89/683 (13%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  +H    K GL  D F    LVNI+ + G +  A+ LFD M ++++V W  ++  YA+
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE---------QVQAYAIKL 288
           NG  +E   LF  +  +GL P+  ++   L    +LG    +             YA  +
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177

Query: 289 LLYN-------------NNSNVVL----------WNKKLSGYLQVGDNHGAIECFVNMIR 325
           +L N             +++  V           WN  +S Y + GD   A + F +M R
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237

Query: 326 S----NVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
                N + +  TF  LV +A       L L +Q+     KS F   + VG++L++ +++
Sbjct: 238 EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297

Query: 380 MGCV----------------------CGL-RTDQ----------------------FTLA 394
            G +                       GL R  Q                        L 
Sbjct: 298 YGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLL 357

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           S     S+L EG    +++H + I+N  V     +  AL+++Y +  ++  A  +F+   
Sbjct: 358 SAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMP 417

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D  +WN++I G   +    +A+  F  M  +G    + ++ + + +C  L  +  G+Q
Sbjct: 418 SKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQ 477

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   +K G +LD+ VS+ +L +Y +   M + Q +F  +P  D V+W + I G +   E
Sbjct: 478 IHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFI-GALATSE 536

Query: 574 EDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
             +  A+  + +M  +G  P+  TF  ++ A S L+ LE GRQIHA ++K   + D  + 
Sbjct: 537 ASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIE 596

Query: 632 ISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
            +L+  Y KC  +ED  I+F +M + R+ V WNAM+ G   +G   + + L   M   G 
Sbjct: 597 NTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQ 656

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
             D  T   VLSAC+    +    E  H    +  +E EV   S LVD   + G+   A 
Sbjct: 657 RLDDFTLATVLSACASVATLERGME-VHACAIRACLEAEVVVGSALVDMYAKCGKIDYAS 715

Query: 751 ELILSMPFEASASMHRALLGACR 773
                MP     S +  + G  R
Sbjct: 716 RFFELMPVRNIYSWNSMISGYAR 738



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 240/523 (45%), Gaps = 64/523 (12%)

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y ++   E+   L + ++++GL  D      ++ +    G     Q      KL      
Sbjct: 49  YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQ------KLFDEMPQ 102

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA--GTDNLNLGQ 352
            N+V W+  +SGY Q G    A   F  +I + +  +      AL A    G + L LG 
Sbjct: 103 KNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGM 162

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYS----------------KMG------------CVC 384
           +IHG   KS + S +++ N L++MYS                KM             C  
Sbjct: 163 EIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRR 222

Query: 385 G--------------------LRTDQFTLASVLRASSSLPE-GLHLSKQIHVHAIKNDTV 423
           G                     R +++T  S++  + SL + GL L +Q+     K+  V
Sbjct: 223 GDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFV 282

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            D +V +AL+  + R G +  A+ +FE  D  +  T N ++ G    +   +A ++F  M
Sbjct: 283 KDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM 342

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGK----QMHAYAMKSGF-ELDLCVSSGILDMYV 538
               E ++  + A  + A      LK+GK    ++HAY +++   ++ + + + ++++Y 
Sbjct: 343 KDLVE-INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYA 401

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC A+ +A+SIF  +P+ D V+W ++ISG   N   + A++ +H MR +G+VP +F+   
Sbjct: 402 KCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVIS 461

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
            + + + L  +  G+QIH   IK     D  V  +L+ +YA+   +E+   +F  M   +
Sbjct: 462 TLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYD 521

Query: 659 TVLWNAMLVGLA-QHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
            V WN+ +  LA    +  + +K F +M   G +P+ VTFI +
Sbjct: 522 QVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 148/307 (48%), Gaps = 9/307 (2%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           ++   Q+H    K+G   D+   + +++++V+ G +V AQ +F+++P  + V+W+ ++SG
Sbjct: 55  VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL--TALEQGRQIHANLIKLDCS 625
              NG  D A  ++  +  +G++P+ +     ++A   L    L+ G +IH  + K   +
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174

Query: 626 SDPFVGISLVDMYAKC-GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           SD  +   L+ MY+ C  +I+DA  +F+++ M+ +  WN+++    + G+     KLF  
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234

Query: 685 MKAHGVE----PDSVTFIGVLS-ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           M+    E    P+  TF  +++ ACS         E      EK     ++   S LV  
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
             R G    A  +   M    + +M+  ++G  R     E  K + +++  L   ++S+Y
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAK-IFKEMKDLVEINASSY 353

Query: 800 VLLSNIF 806
            +L + F
Sbjct: 354 AVLLSAF 360



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 6/204 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYA 130
           G+  HA IL  S   D  + N L+  Y +C  +     +F +M + RD +SWN++++ Y 
Sbjct: 577 GRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI 636

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
           H+G      + +   L   + +        TLA +L  C S   +     VH  A++  L
Sbjct: 637 HNG-----ILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACL 691

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +  V  ALV++Y+K GKI  A   F+ M  R++  W  M+  YA +G G +   LF  
Sbjct: 692 EAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQ 751

Query: 251 LHRSGLCPDDESVQCVLGVISDLG 274
           + + G  PD  +   VL   S +G
Sbjct: 752 MKQHGQLPDHVTFVGVLSACSHVG 775



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 34/317 (10%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S L    S   ++LG+  H   +      D  ++N L+T+Y+    +   +++F  MP+
Sbjct: 460 ISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPE 519

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            D +SWNS + A A S      +V +  + F  + ++    +R+T   +L    S   + 
Sbjct: 520 YDQVSWNSFIGALATS----EASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLE 575

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAY 235
               +H   LK  +  D  +   L+  Y K  ++ + + +F  M E RD V W  M+  Y
Sbjct: 576 LGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGY 635

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLL---- 290
             NG   +   L   + + G   DD ++  VL   + +       +V A AI+  L    
Sbjct: 636 IHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEV 695

Query: 291 -----------------YNNN-------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                            Y +         N+  WN  +SGY + G    A++ F  M + 
Sbjct: 696 VVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQH 755

Query: 327 NVQYDSVTFLVALAAVA 343
               D VTF+  L+A +
Sbjct: 756 GQLPDHVTFVGVLSACS 772



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 5/118 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  G   HA  + +    +  + + L+ MY++CG + YA R F+ MP R
Sbjct: 665 TVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR 724

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++ SWNS+++ YA  G G      +  +LF  +++       +T   +L  C   G V
Sbjct: 725 NIYSWNSMISGYARHGHGG-----KALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLV 777


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 233/711 (32%), Positives = 356/711 (50%), Gaps = 90/711 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N V +   + GY Q      A E F  +     + +   F   L  +   +   LG+ +H
Sbjct: 10  NTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVH 69

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
           G  LK G+ S   +G +LI+ YS  GCV                                
Sbjct: 70  GCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFS 129

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G + + FT A VL+A   L +     K +H   +K +   D +V   L
Sbjct: 130 EALEFFSQMRVAGFKPNNFTFAGVLKACLGL-QNFDAGKTVHCSVLKTNYERDLYVGVGL 188

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +++Y R G   +A   F +    D+  W+ MI  +  S  S KALE+F  M  +    ++
Sbjct: 189 LELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQ 248

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T ++ ++A   +  L   K +H +A+K+G   D+ VS+ ++  Y KCG +  +  +F  
Sbjct: 249 FTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEA 308

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +   +DV+W T+I   V  G+ + ALS++  M    V   E T++ +++A + L ALE G
Sbjct: 309 LSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELG 368

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
            Q+H    K     D  VG +L+DMYAKCG+I+DA  +F  +D+R+ V WNA++ G + H
Sbjct: 369 LQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMH 428

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G G E +K+F  MK    +PD +TF+GVLSACS TG + E  + F  M++ YGIEP +EH
Sbjct: 429 GLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEH 488

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +V  +GR+G   +A + I  +PFE S  + RALLGAC +  D E G+  A++++ LE
Sbjct: 489 YTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELE 548

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
           P D +++VLLSNI+A A +W +V   R  MKRK VKK+P                     
Sbjct: 549 PRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSH 608

Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP- 888
               LI   +E L  + ++ GY P  + VLLDVE++EKER L+ HSE+LA A+GL+  P 
Sbjct: 609 ADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPA 668

Query: 889 --PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
             P  +I                  +  ++ +    NRFHH  +G C CAD
Sbjct: 669 GCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCAD 719



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 240/543 (44%), Gaps = 82/543 (15%)

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +FD+MP+R+ +S+ +++  YA S +       E F LF  L       +      +LKL 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNK-----FIEAFELFARLHGEGHELNPFVFTTVLKLL 56

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           +S  +      VHG  LK+G   + F+  AL++ YS  G +  A+ +FD +  +D+V W 
Sbjct: 57  VSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWT 116

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV--------------ISDLGK 275
            M+ +YAEN    E    F  +  +G  P++ +   VL                 S L  
Sbjct: 117 GMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKT 176

Query: 276 RHEEQVQAYAIKLLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECF 320
            +E  +      L LY                  ++V+ W+  +S + Q G +  A+E F
Sbjct: 177 NYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIF 236

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M R+ V  +  TF   L A A  ++L+L + IHG  LK+G  + V V N+L+  Y+K 
Sbjct: 237 CQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC 296

Query: 381 GCV-------------------------------------------CGLRTDQFTLASVL 397
           GC+                                             ++  + T +S+L
Sbjct: 297 GCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSIL 356

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           RA ++L   L L  Q+H    K     D  V  ALID+Y + GS+ +A ++F+  D  D 
Sbjct: 357 RACATLA-ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDK 415

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WNA+I GY +     +A+++F+ M  +  + DE+T    + AC     L +GKQ +  
Sbjct: 416 VSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFT 474

Query: 518 AMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
           +MK  + ++ C+   + ++ +  + G +  A     DIP  P  + W  ++  CV + + 
Sbjct: 475 SMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDV 534

Query: 575 DLA 577
           +L 
Sbjct: 535 ELG 537



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 164/355 (46%), Gaps = 34/355 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+  +S     LG+  H  +L      + F+   L+  YS  G +  AR +FD++  +
Sbjct: 51  TVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK 110

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW  ++A+YA +     +  +E    F  +R +    +  T A +LK CL      A
Sbjct: 111 DMVSWTGMIASYAEN-----DCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDA 165

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            +TVH   LK     D +V   L+ +Y++ G   +A   F  M + DV+ W  M+  +A+
Sbjct: 166 GKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQ 225

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN--- 293
           +G  E+   +F  + R+ + P+  +   VL   +D+      + +  +A+K  L  +   
Sbjct: 226 SGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFV 285

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                    + N V WN  +  Y+Q+GD   A+  F NM+R  V
Sbjct: 286 SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           Q   VT+   L A A    L LG Q+H  T K+ +   V VGN+LI+MY+K G +
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSI 400



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 35/366 (9%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           +Y     FS +L  F Q        ++  +  +L+  +   +   GK+ H  +L ++   
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D ++   L+ +Y+RCG    A R F  MP  D+I W+ +++ +A SG+       +   +
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSE-----KALEI 235

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +R +    ++ T + +L+       +  S+T+HG+ALK GL  D FVS AL+  Y+K
Sbjct: 236 FCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G I ++  LF+ + +R+ V W  ++ +Y + G GE    LF ++ R  +   + +   +
Sbjct: 296 CGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSI 355

Query: 267 LGVISDLGKRH-EEQVQAYAIKLL-------------LYNNNSNV--------------- 297
           L   + L       QV     K +             +Y    ++               
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDK 415

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  + GY   G    AI+ F  M  +  + D +TF+  L+A + T  L+ G+Q + T
Sbjct: 416 VSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFT 474

Query: 358 TLKSGF 363
           ++K  +
Sbjct: 475 SMKQDY 480



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 29/262 (11%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           +Y  L     +L  F     +   ++   + SILR   + + L LG   H     +    
Sbjct: 323 SYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQ 382

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D  + N L+ MY++CGS+  AR +FD +  RD +SWN+I+  Y+  G G      E  ++
Sbjct: 383 DVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLG-----VEAIKM 437

Query: 147 FRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           F  ++E+      LT   +L  C     L  G  + +     Y ++  +  + +    +V
Sbjct: 438 FNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCM--EHYT--CMV 493

Query: 202 NIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG----- 255
            +  + G + +A KF+ D   E  V++W+ +L        G  V H  V+L R       
Sbjct: 494 WLMGRSGNLDQAVKFIEDIPFEPSVMIWRALL--------GACVIHNDVELGRISAQRVL 545

Query: 256 -LCPDDESVQCVLGVISDLGKR 276
            L P DE+   +L  I    +R
Sbjct: 546 ELEPRDEASHVLLSNIYARARR 567


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 252/813 (30%), Positives = 398/813 (48%), Gaps = 150/813 (18%)

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K+GL +  ++   L+N+Y+K G   +A  LF+ M  +    W  +L  YA+ G  E+  
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            +F       L P  +SV                                    W   + 
Sbjct: 62  QVF------DLIPVRDSVS-----------------------------------WTTIIV 80

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY Q+G    AI+ FV+M++  V     T    LA+ A T +  +G+++H   +K G ++
Sbjct: 81  GYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHA 140

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
            V V NSL+NMY+K G           +A V+     L      +  I +H         
Sbjct: 141 CVPVANSLLNMYAKTG--------DLKMAKVVFDRMKLRNTSSWNAMISLH--------- 183

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH-MH 484
             ++   +D+     ++A+ E L E     D+ +WN+MI G       ++AL+ FS  + 
Sbjct: 184 --MNCGRVDL-----ALAQFELLSER----DIVSWNSMIAGCNQHGFDNEALQFFSSILK 232

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE-------------------- 524
            +  + D  ++A+A+ AC  L  L  GKQ+H Y +++ F+                    
Sbjct: 233 DTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVE 292

Query: 525 -------------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
                        LD+   + +L+ YVK G +  A+ IFN +  PD VAWT MI G V N
Sbjct: 293 IARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQN 352

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G  + A+ ++  M   G  P+ FT A ++ ASS +T+L  G+QIHA+ I+   +  P VG
Sbjct: 353 GLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVG 412

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
            +L  MYAK G+I  A  +F  +   R+TV W +M++ LAQHG GEE ++LFE M   G+
Sbjct: 413 NALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGI 472

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +PD +T++GVLSAC++ GLV +    F LM+  + I+P + HY+ +VD  GRAG  +EA 
Sbjct: 473 KPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAY 532

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           + + +MP E       +LL +C+V  + +  K  AE+L+ +EP +S AY  L+N++++  
Sbjct: 533 KFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCG 592

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
           +WDD    R  MK + VKK+                         D I+  ++ + K IK
Sbjct: 593 KWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIK 652

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
           + G+ PDT+ VL D+E E K++ L YHSEKLA A+G+ISTP ++ +              
Sbjct: 653 KMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHN 712

Query: 894 -------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                  L ++E +   A RFHH +DG C C D
Sbjct: 713 AIKFISKLVDREIIVRDATRFHHFKDGSCSCKD 745



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 241/596 (40%), Gaps = 161/596 (27%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + N   +   F  N +++ Y++ G L  A ++FD +P RD +SW +I+  Y   G     
Sbjct: 32  LFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGR---- 87

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
              +  ++F  + +     ++ TL  +L  C ++G     + VH + +K+GL     V+ 
Sbjct: 88  -FEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVAN 146

Query: 199 ALVNIYSKFGKIREAKFLFDGMQ-------------------------------ERDVVL 227
           +L+N+Y+K G ++ AK +FD M+                               ERD+V 
Sbjct: 147 SLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVS 206

Query: 228 WKVMLRAYAENGFGEEVFHLFVD-LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYA 285
           W  M+    ++GF  E    F   L  + L PD  S+   L   ++L K    +Q+  Y 
Sbjct: 207 WNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYI 266

Query: 286 IKLLLYNNNS------------------------------NVVLWNKKLSGYLQVGD--- 312
           ++ +   + +                              +V+ +   L+GY+++GD   
Sbjct: 267 VRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITP 326

Query: 313 ----------------------------NHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                                       N+ AIE F  M+    + +S T    L+A + 
Sbjct: 327 ARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSS 386

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
             +LN G+QIH + ++SG   +  VGN+L  MY+K G + G R     + ++LR +    
Sbjct: 387 VTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGAR----KVFNLLRQN---- 438

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
                           DTV+     T++I    ++G   EA                   
Sbjct: 439 ---------------RDTVS----WTSMIMALAQHGLGEEA------------------- 460

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
                       +ELF  M T G + D IT    + AC    +++QG+  +   MK+  +
Sbjct: 461 ------------IELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS-YFDLMKNVHK 507

Query: 525 LDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +D  +S  + ++D++ + G + +A     ++P  PD +AW +++S C      DLA
Sbjct: 508 IDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLA 563



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 109/274 (39%), Gaps = 59/274 (21%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARI 79
           FSS  KDT      FSL+                    S L    +   L  GK  H  I
Sbjct: 227 FSSILKDTSLKPDRFSLA--------------------SALSACANLEKLSFGKQIHGYI 266

Query: 80  LNSSQIPDRFLTNNLMTMYSRCGSLVYARR------------------------------ 109
           + +       + N L++MY++ G +  ARR                              
Sbjct: 267 VRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITP 326

Query: 110 ---LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
              +F+ + D D+++W +++  Y  +G  N     +   +F+++       +  TLA +L
Sbjct: 327 ARQIFNSLKDPDVVAWTAMIVGYVQNGLNN-----DAIEVFKTMVSEGPRPNSFTLAAML 381

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDV 225
               S   +   + +H  A++ G      V  AL  +Y+K G I  A+ +F+ + Q RD 
Sbjct: 382 SASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDT 441

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           V W  M+ A A++G GEE   LF  +   G+ PD
Sbjct: 442 VSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPD 475



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PD 116
           ++L  + S + L  GK  HA  + S +     + N L TMY++ GS+  AR++F+ +  +
Sbjct: 379 AMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN 438

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RD +SW S++ A A  G G      E   LF  +         +T   +L  C   G V 
Sbjct: 439 RDTVSWTSMIMALAQHGLGE-----EAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVE 493

Query: 177 ASETVHGYALKIGLVWDEFVS--GALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML 232
              +       +  + D  +S    +V+++ + G ++EA KF+ +   E DV+ W  +L
Sbjct: 494 QGRSYFDLMKNVHKI-DPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLL 551



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 6/172 (3%)

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++KL  +   ++  +L+++YAK G   DA+ LF +M ++ T  WN +L G A+ G  E+ 
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
            ++F+ +       DSV++  ++   +  G   +A + F  M +   +  +    + L  
Sbjct: 61  HQVFDLIPVR----DSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLAS 116

Query: 739 --ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
             A G  G  K+    ++ +   A   +  +LL      GD +  K V +++
Sbjct: 117 CAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRM 168


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/660 (34%), Positives = 341/660 (51%), Gaps = 92/660 (13%)

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR--------TDQFTLASVLRAS 400
            LG++IHG  LK G    V VGN+L+ MY +  CV   R         D  + ++++R+ 
Sbjct: 111 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSL 170

Query: 401 SSLPE----------------------------------GLHLSKQIHVHAIKNDTVADS 426
           S   E                                   + + K +H + I+N      
Sbjct: 171 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 230

Query: 427 FV--STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
            V  +TAL+D+Y + G +  A  LF       + +W AMI G I SN   +  +LF  M 
Sbjct: 231 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
                 +EIT+ + +  CG    L+ GKQ+HAY +++GF + L +++ ++DMY KC  + 
Sbjct: 291 EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIR 350

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           +A+++F+     D + WT M+S        D A +++ QMR SGV P + T   L+   +
Sbjct: 351 NARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 410

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
              AL+ G+ +H+ + K     D  +  +LVDMYAKCG+I  A  LF +   R+  +WNA
Sbjct: 411 VAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 470

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           ++ G A HG GEE L +F +M+  GV+P+ +TFIG+L ACS+ GLV+E  + F  M   +
Sbjct: 471 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 530

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV 784
           G+ P++EHY  +VD LGRAG   EA E+I SMP + +  +  AL+ ACR+  + + G+  
Sbjct: 531 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 590

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLI- 843
           A +L+ +EP +    VL+SNI+AAAN+W D    R  MK   +KK+P   +  +V G + 
Sbjct: 591 ATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI-EVNGTVH 649

Query: 844 -----------------------KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                                  +++ E GYVPDT  VLL+++EEEKE AL YHSEKLA 
Sbjct: 650 EFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAM 709

Query: 881 AYGLISTPPSSVILSNKE---------------PLYA--------NRFHHLRDGMCPCAD 917
           A+GLIST PS+ I   K                 +Y         NRFHH R+G C C D
Sbjct: 710 AFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGD 769



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 210/488 (43%), Gaps = 86/488 (17%)

Query: 162 LAP-LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           +AP +LK C    +    + +HG+ LK GL  D FV  AL+ +Y +   +  A+ +FD M
Sbjct: 96  MAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM 155

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEE 279
            ERDVV W  M+R+ + N   +    L  +++   + P + ++  ++ + +D    R  +
Sbjct: 156 MERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGK 215

Query: 280 QVQAYAIK--------------LL--------------LYN--NNSNVVLWNKKLSGYLQ 309
            + AY I+              LL              L+N      VV W   ++G ++
Sbjct: 216 AMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIR 275

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                   + F+ M   N+  + +T L  +     T  L LG+Q+H   L++GF  ++ +
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335

Query: 370 GNSLINMYSK-------------------------------MGCV------------CGL 386
             +L++MY K                                 C+             G+
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 395

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R  + T+ S+L +  ++   L L K +H +  K     D  ++TAL+D+Y + G +  A 
Sbjct: 396 RPTKVTIVSLL-SLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            LF      D+  WNA+I G+ +     +AL++F+ M   G + ++IT    + AC    
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514

Query: 507 MLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
           ++ +GK++     H + +    E   C    ++D+  + G + +A  +   +P  P+ + 
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGC----MVDLLGRAGLLDEAHEMIKSMPIKPNTIV 570

Query: 561 WTTMISGC 568
           W  +++ C
Sbjct: 571 WGALVAAC 578



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 178/371 (47%), Gaps = 43/371 (11%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V +S+  +   RN   F ++L    + +      S     S++     T+++ +GK+ HA
Sbjct: 161 VSWSTMIRSLSRN-KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 78  RILNSSQ-----IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
            ++ +S      +P    T  L+ MY++CG L  AR+LF+ +  + ++SW +++A    S
Sbjct: 220 YVIRNSNNEHMGVPT---TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRS 276

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
                  + EG +LF  ++E   F + +T+  L+  C  +G +   + +H Y L+ G   
Sbjct: 277 NR-----LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
              ++ ALV++Y K   IR A+ LFD  Q RDV++W  ML AYA+    ++ F+LF  + 
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKR-----HEEQVQAYAI---------------- 286
            SG+ P   ++  +L + +     DLGK       +E+V+   I                
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451

Query: 287 ---KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
              +L +   + ++ +WN  ++G+   G    A++ F  M R  V+ + +TF+  L A +
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511

Query: 344 GTDNLNLGQQI 354
               +  G+++
Sbjct: 512 HAGLVTEGKKL 522



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 7/260 (2%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + +KACG +   + GK++H + +K G + D+ V + ++ MY +C  +  A+ +F+ +   
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W+TMI     N E D+AL +  +M    V P E     +V   +    +  G+ +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 617 ANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           A +I+   S++  +G+    +L+DMYAKCG++  A  LF  +  +  V W AM+ G  + 
Sbjct: 219 AYVIR--NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRS 276

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
              EE  KLF  M+   + P+ +T + ++  C +TG + +  +  H    + G    +  
Sbjct: 277 NRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGAL-QLGKQLHAYILRNGFSVSLAL 335

Query: 733 YSFLVDALGRAGRTKEAGEL 752
            + LVD  G+    + A  L
Sbjct: 336 ATALVDMYGKCSDIRNARAL 355


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 275/996 (27%), Positives = 449/996 (45%), Gaps = 137/996 (13%)

Query: 48   SSSSSSSQWFSILRHAISTSDLLLGKSTHARI----LNSSQIPDRFLTNNLMTMYSRCGS 103
            S++ +S    ++L    ++ DL +G+S HA I    L         + N ++ MY++CGS
Sbjct: 122  SAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGS 181

Query: 104  LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
               A  +F  +P++D++SW ++  AYA           +  R+FR +       + +T  
Sbjct: 182  PEDAIAVFLTIPEKDVVSWTAMAGAYAQ----ERRFYPDALRIFREMLLQPLAPNVITFI 237

Query: 164  PLLKLCLS-SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-- 220
              L  C S     W    +H    + GL +D     AL+N+Y K G    A  +F  M  
Sbjct: 238  TALGACTSLRDGTWLHSLLH----EAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMAS 293

Query: 221  -QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----DLG- 274
             QE D+V W  M+ A  E G   +   +F  L   G+ P+  ++  +L  ++    D G 
Sbjct: 294  RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353

Query: 275  --KRHEEQVQAYAIKLLLYNN------------------------NSNVVLWNKKLSGYL 308
              K H    ++  ++ ++  N                          +V+ WN  L    
Sbjct: 354  ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASE 413

Query: 309  QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL-KSGFYSAV 367
                    +  F +M+ + +  + V+F+  L A + ++ L+ G++IH   L +   Y   
Sbjct: 414  DRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES 473

Query: 368  IVGNSLINMYSKMGCVC--------------GLRTDQFTLASVLRASSS----------- 402
             V   L++MY K G +                L T    L +  +   S           
Sbjct: 474  SVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533

Query: 403  ----LPEGLHLSK-----------QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                LP+ L  +            Q+    I       + + TALI ++ R   + +A  
Sbjct: 534  QGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARS 593

Query: 448  LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
            +F+  D  D+ +W AM+     + +  +   LF  M   G   D+ T+AT +  C     
Sbjct: 594  VFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT 653

Query: 508  LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            L  GK +HA   + G E D+ V + +L+MY  CG   +A S F  + A D V+W  M + 
Sbjct: 654  LGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 568  CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
                G    A+ ++  M+L GV PD+ TF+  +  S     +  G+  H    +    SD
Sbjct: 714  YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSD 773

Query: 628  PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
              V   LV +YAKCG +++A  LF+       VL NA++  LAQHG  EE +K+F  M+ 
Sbjct: 774  VSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 688  HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             GV PD  T + ++SAC + G+V E   +F  M+E +GI P +EHY+  VD LGRAG+ +
Sbjct: 834  EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 748  EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
             A ++I  MPFE +  +  +LLG C++QGD E G+  A++++ L+P +S+A+V+LSNI+ 
Sbjct: 894  HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 808  AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
            A  +W D    R ++  +NVK  P                        D I+  ++ L  
Sbjct: 954  ATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLEL 1013

Query: 845  RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----------- 893
             ++  GY  D     LD E+E KE+AL YHSE++A A+GLI+TPP + +           
Sbjct: 1014 LMRRAGYEADKG---LDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGD 1070

Query: 894  ----------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                      +  +E +  +  RFHH  +G C C D
Sbjct: 1071 CHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKD 1106



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 211/809 (26%), Positives = 377/809 (46%), Gaps = 97/809 (11%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           ++ ++L+  + ++DL  GK  H  I N+      FL N L+ MY RCGSL  A  +F KM
Sbjct: 27  EYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKM 86

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSG 173
            +R+++SW ++++A A SG          F LFR+ L ES    +  TL  +L  C +S 
Sbjct: 87  EERNVVSWTALISANAQSGA-----FARAFALFRTMLLESSAAPNSYTLVAMLNACANSR 141

Query: 174 YVWASETVHGYALKIGLVWDE----FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            +    ++H    ++GL  +      V  A++N+Y+K G   +A  +F  + E+DVV W 
Sbjct: 142 DLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWT 201

Query: 230 VMLRAYA-ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--------------- 273
            M  AYA E  F  +   +F ++    L P+  +    LG  + L               
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGL 261

Query: 274 --------------GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                         GK  + +      K +      ++V WN  +S  ++ G +  A+  
Sbjct: 262 GFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTD-NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
           F  +    ++ +SVT +  L A+A +  +    ++ HG   +SG+   V+VGN++I+MY+
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYA 381

Query: 379 KMG--------------------------------------------CVCGLRTDQFTLA 394
           K G                                             + G+  ++ +  
Sbjct: 382 KCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFI 441

Query: 395 SVLRASSSLPEGLHLSKQIH--VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           ++L A S+  E L   ++IH  +   + D V +S V+T L+ +Y + GS+AEAE +F+  
Sbjct: 442 AILNACSN-SEALDFGRKIHSLILTRRRDYV-ESSVATMLVSMYGKCGSIAEAELVFKEM 499

Query: 453 --DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 L TWN M+  Y  ++ S +A      M   G   D ++  + + +C C    ++
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYC---SQE 556

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            + +    ++SG+    C+ + ++ M+ +C  +  A+S+F+++   D V+WT M+S   +
Sbjct: 557 AQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAE 615

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           N +      ++ +M+L GV+PD+FT A  +      T L  G+ IHA + ++   +D  V
Sbjct: 616 NRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAV 675

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +L++MY+ CG+  +A   F+ M  R+ V WN M    AQ G  +E + LF  M+  GV
Sbjct: 676 ENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGV 735

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +PD +TF   L+    + LVS+  + FH +  + G++ +V   + LV    + G+  EA 
Sbjct: 736 KPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAI 794

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTE 779
            L      + +  +  A++GA    G +E
Sbjct: 795 SLFRG-ACQWTVVLLNAIIGALAQHGFSE 822


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 233/713 (32%), Positives = 366/713 (51%), Gaps = 94/713 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +V  WN  +S Y ++G  H A++CF   + ++ +Q D  TF   + A     NL+ G+++
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACG---NLDDGRKV 161

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCV---CGLRT----------------------- 388
           H   LK GF   V +  S I+ YS+ G V   C L                         
Sbjct: 162 HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKV 221

Query: 389 -------DQFTLASV----LRASSSLPEGLHLSK-----QIHVHAIKNDTVADSFVSTAL 432
                  D+    SV    +  SS LP  + L        IHV+AIK     D FV  AL
Sbjct: 222 AEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNAL 281

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I++Y + G +  AE +F      D+ +WN+++  +  +     AL +++ MH+ G   D 
Sbjct: 282 INMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDL 341

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T+ +       L      + +H +  +  + L D+ + + I+DMY K G +  A+ +F 
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFE 401

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASSCLTALE 610
            +P  D ++W ++I+G   NG  + A+ +Y  MR  SG VP++ T+  ++ A S L AL+
Sbjct: 402 GLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALK 461

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QG + H  LIK     D FV   LVDMY KCG + DA  LF ++  +++V WNA++    
Sbjct: 462 QGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHG 521

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG G + +KLF++M++ GV+PD +TF+ +LSACS++GLV E    F LM+E YGI P +
Sbjct: 522 LHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSL 581

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           +HY  +VD  GRAG  ++A   + +MP     S+  ALLGACR+  + E  + V++ L+ 
Sbjct: 582 KHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLK 641

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           +E  +   YVLLSNI+A    W+ V   R   + + +KK P                   
Sbjct: 642 VESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQ 701

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                + I++++  L  ++K  GYVPD +FVL DVE++EKE  L  HSE+LA A+G+IST
Sbjct: 702 THPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIIST 761

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           PP + +                     ++ +E +   +NRFHH +DG+C C D
Sbjct: 762 PPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGD 814



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 261/617 (42%), Gaps = 113/617 (18%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           ++ +H   +  G     F+S  L+N Y+  G I  A+  FD +Q +DV  W  M+ AYA 
Sbjct: 59  AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118

Query: 238 NGFGEEVFHLFVD---------------------LHRSGLCPDDESVQCVLGVISDLGKR 276
            G     FH  VD                     +   G   D   V C   ++  LG  
Sbjct: 119 IGH----FHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHC---LVLKLGFE 171

Query: 277 HEEQVQAYAIKLL-----------LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            +  + A  I              L++N    ++  WN  +SG+   G    A+E F  M
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEM 231

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              +V  DSVT    L      D++  G  IH   +K G    + V N+LINMY+K G +
Sbjct: 232 RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGEL 291

Query: 384 -------------------------------------------CGLRTDQFTLASVLRAS 400
                                                       G+  D  TL S+   +
Sbjct: 292 RSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVA 351

Query: 401 SSLPEGLHLSKQIHVHAIKND-TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           + L   L  S+ IH    +    + D  +  A+ID+Y + G +  A  +FE     D+ +
Sbjct: 352 AELGNFLS-SRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVIS 410

Query: 460 WNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           WN++I GY  +  +++A++++S M + SG   ++ T  + + A   L  LKQG + H   
Sbjct: 411 WNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL 470

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           +K+    D+ VS+ ++DMY KCG + DA S+F ++P    V+W  +IS    +G    A+
Sbjct: 471 IKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAV 530

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASS----------CLTALEQGRQIHANLIKLDCSSDP 628
            ++ +M+  GV PD  TF  L+ A S          C   +++   I  +L    C    
Sbjct: 531 KLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGC---- 586

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKA 687
                +VD++ + G++E A+   K M +R  V +W A+L     H    E ++L   +  
Sbjct: 587 -----MVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIH----ENVELVRTVSD 637

Query: 688 H--GVEPDSVTFIGVLS 702
           H   VE ++V +  +LS
Sbjct: 638 HLLKVESENVGYYVLLS 654



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 145/575 (25%), Positives = 244/575 (42%), Gaps = 86/575 (14%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           L K  HA ++ S +    FL+  L+  Y+  G + +AR  FD++  +D+ +WNS+++AYA
Sbjct: 58  LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G  +A    + F  F  L  S   +   T  P+++ C   G +     VH   LK+G 
Sbjct: 118 RIGHFHA--AVDCFNEF--LSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGF 170

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D +++ + ++ YS+FG +  A  LFD M  RD+  W  M+  +  NG   E   +F +
Sbjct: 171 ECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDE 230

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKL--------------------- 288
           +    +  D  ++  +L +   L        +  YAIKL                     
Sbjct: 231 MRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGE 290

Query: 289 -----LLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                 ++N     ++V WN  L+ + Q      A+  +  M    V  D +T LV+LA+
Sbjct: 291 LRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLT-LVSLAS 349

Query: 342 VAGT-DNLNLGQQIHG-TTLKSGFYSAVIVGNSLINMYSKMGCV---------------- 383
           VA    N    + IHG  T +  F   + +GN++I+MY+K+G +                
Sbjct: 350 VAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVI 409

Query: 384 ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G   +Q T  S+L A S L   L    + H 
Sbjct: 410 SWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLG-ALKQGMKAHG 468

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             IKN    D FVST L+D+Y + G +A+A  LF         +WNA+I  + L     K
Sbjct: 469 QLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLK 528

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGIL 534
           A++LF  M + G + D IT  + + AC    ++ +G+       ++ G    L     ++
Sbjct: 529 AVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMV 588

Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
           D++ + G +  A +   ++P  PD   W  ++  C
Sbjct: 589 DLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGAC 623



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 152/303 (50%), Gaps = 4/303 (1%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           +HL+KQ+H   + +      F+S  LI+ Y   G +  A   F+     D+ TWN+MI  
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 467 YILSNNSHKALELFSH-MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           Y    + H A++ F+  + TS  + D  T    ++ACG    L  G+++H   +K GFE 
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACG---NLDDGRKVHCLVLKLGFEC 172

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D+ +++  +  Y + G +  A ++F+++   D   W  MISG   NG+   AL ++ +MR
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
              V  D  T + L+     L  +  G  IH   IKL    D FV  +L++MYAK G + 
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            A  +F QM +R+ V WN++L    Q+      L ++  M + GV PD +T + + S  +
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352

Query: 706 YTG 708
             G
Sbjct: 353 ELG 355



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 205/456 (44%), Gaps = 69/456 (15%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FLQ  H++          ++R   +  D   G+  H  +L      D ++  + +  YSR
Sbjct: 137 FLQSDHYTFPP-------VIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSR 186

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            G +  A  LFD M  RD+ +WN++++ +  +G+     V E   +F  +R        +
Sbjct: 187 FGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGK-----VAEALEVFDEMRFKSVSMDSV 241

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T++ LL +C+    + +   +H YA+K+GL +D FV  AL+N+Y+KFG++R A+ +F+ M
Sbjct: 242 TISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQM 301

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEE 279
           + RD+V W  +L A+ +N        ++  +H  G+ PD  ++  +  V ++LG      
Sbjct: 302 KVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSR 361

Query: 280 QVQAYAIKLLLYNNN-----------------------------SNVVLWNKKLSGYLQV 310
            +  +  +   + ++                              +V+ WN  ++GY Q 
Sbjct: 362 SIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQN 421

Query: 311 GDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
           G  + AI+ + +M   S    +  T++  L A +    L  G + HG  +K+  Y  + V
Sbjct: 422 GLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFV 481

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP-------EGLH--------LSKQIH 414
              L++MY K    CG   D  +L   +   SS+         GLH        L K++ 
Sbjct: 482 STCLVDMYGK----CGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQ 537

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
              +K D +  +FVS  L+     +G + E ++ F+
Sbjct: 538 SEGVKPDHI--TFVS--LLSACSHSGLVDEGQWCFQ 569



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 22/220 (10%)

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           T +   +Q+HA L+    +   F+   L++ YA  G+I  A + F Q+  ++   WN+M+
Sbjct: 54  TKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMI 113

Query: 667 VGLAQHGNGEETLKLF-EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
              A+ G+    +  F E +    ++ D  TF  V+ AC   G + +     H +  K G
Sbjct: 114 SAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDG-RKVHCLVLKLG 169

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
            E +V   +  +    R G    A  L  +M      + + A++    + G       VA
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWN-AMISGFYLNGK------VA 222

Query: 786 EKLMALEPFDSSAY-------VLLSNIFAAANQWDDVTSA 818
           E   ALE FD   +       V +S++     Q DD+ S 
Sbjct: 223 E---ALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG 259


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 263/911 (28%), Positives = 435/911 (47%), Gaps = 137/911 (15%)

Query: 139 NVTEGFRLFRSLRESITFTS----RLTLAPLLKLCLSSGYVWASETVHG-YALKIGLVWD 193
           N+ +   L  S  ++ T +S    +  +  LL+ C     +     VH   +    L  D
Sbjct: 68  NLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRND 127

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL-H 252
             +S  ++ +YS  G   +++ +FD  +E+D+ L+  +L  Y+ N    +   LF++L  
Sbjct: 128 VVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLS 187

Query: 253 RSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK-------------LLLYNN----- 293
            + L PD+ ++ CV    + +      E V A A+K             + +Y       
Sbjct: 188 ATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVE 247

Query: 294 ----------NSNVVLWNKKLSGYLQVGDNHGAIEC---FVNMIRSNVQ---YDSVTFLV 337
                     N N+V WN   S      +N G  EC   F  ++ S  +    D  T + 
Sbjct: 248 SAVKVFETMRNRNLVSWN---SVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------------- 381
            + A A    + +G  +HG   K G    V V NSL++MYSK G                
Sbjct: 305 VIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKN 364

Query: 382 ------CVCG----------------------LRTDQFTLASVLRASSSLPEGLHLSKQI 413
                  + G                      +R ++ T+ +VL A S   + L L K+I
Sbjct: 365 VVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSL-KEI 423

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H +A ++  + D  V+ A +  Y +  S+  AE +F   +G  +++WNA+I  +  +   
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            K+L+LF  M  SG   D  TI + + AC  L  L+ GK++H + +++G ELD  +   +
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISL 543

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           + +Y++C +M+  + IF+ +     V W  MI+G   N     AL  + QM   G+ P E
Sbjct: 544 MSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQE 603

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
                ++ A S ++AL  G+++H+  +K   S D FV  +L+DMYAKCG +E +  +F +
Sbjct: 604 IAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDR 663

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ ++  +WN ++ G   HG+G + ++LFE M+  G  PDS TF+GVL AC++ GLV+E 
Sbjct: 664 VNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEG 723

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            +    M+  YG++P++EHY+ +VD LGRAG+  EA +L+  MP E  + +  +LL +CR
Sbjct: 724 LKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCR 783

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPAD 833
             GD E G+ V++KL+ LEP  +  YVLLSN++A   +WD+V   R  MK   + KD A 
Sbjct: 784 NYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKD-AG 842

Query: 834 LIFAKVEGLI------------------------KRIKEGGYVPDTDFVLLDVEEEEKER 869
             + ++ G++                        K+I + GY PDT  VL ++EEE K +
Sbjct: 843 CSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIK 902

Query: 870 ALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFH 906
            L  HSEKLA ++GL++T   + +   K                             RFH
Sbjct: 903 ILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFH 962

Query: 907 HLRDGMCPCAD 917
           H ++G+C C D
Sbjct: 963 HFKNGLCTCGD 973



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 198/739 (26%), Positives = 328/739 (44%), Gaps = 102/739 (13%)

Query: 43  QKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSR 100
           Q    SSS  S +   IL  A     ++ +G+  HA +  S ++  D  L+  ++ MYS 
Sbjct: 81  QNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSA 140

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SR 159
           CGS   +R +FD   ++DL  +N++L+ Y+ +         +   LF  L  +       
Sbjct: 141 CGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNAL-----FRDAISLFLELLSATDLAPDN 195

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            TL  + K C     V   E VH  ALK G   D FV  AL+ +Y K G +  A  +F+ 
Sbjct: 196 FTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFET 255

Query: 220 MQERDVVLWKVMLRAYAEN-GFGE--EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK- 275
           M+ R++V W  ++ A +EN GFGE   VF   +     GL PD  ++  V+   + +G+ 
Sbjct: 256 MRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEV 315

Query: 276 RHEEQVQAYAIKLLL----------------------------YNNNSNVVLWNKKLSGY 307
           R    V   A KL +                             N   NVV WN  + GY
Sbjct: 316 RMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY 375

Query: 308 LQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
            + GD  G  E    M R   V+ + VT L  L A +G   L   ++IHG   + GF   
Sbjct: 376 SKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD 435

Query: 367 VIVGNSLINMYSK---MGCV----CGLR-------------------------------- 387
            +V N+ +  Y+K   + C     CG+                                 
Sbjct: 436 ELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMD 495

Query: 388 ----TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
                D+FT+ S+L A + L + L   K+IH   ++N    D F+  +L+ +Y +  SM 
Sbjct: 496 SGMDPDRFTIGSLLLACARL-KFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSML 554

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
             + +F+  +   L  WN MI G+  +    +AL+ F  M + G +  EI +   + AC 
Sbjct: 555 LGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACS 614

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            +  L+ GK++H++A+K+    D  V+  ++DMY KCG M  +Q+IF+ +   D+  W  
Sbjct: 615 QVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNV 674

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF-AILVKASSC------LTALEQGRQIH 616
           +I+G   +G    A+ ++  M+  G  PD FTF  +L+  +        L  L Q + ++
Sbjct: 675 IIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLY 734

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGN- 674
               KL+  +       +VDM  + G + +A  L  +M D  ++ +W+++L     +G+ 
Sbjct: 735 GVKPKLEHYA------CVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDL 788

Query: 675 --GEETLKLFEDMKAHGVE 691
             GEE  K   +++ +  E
Sbjct: 789 EIGEEVSKKLLELEPNKAE 807



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 12/293 (4%)

Query: 470 SNNSHKALELFSHMH-----TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GF 523
           S N + AL L  H H      S   + +  I   ++ACG    +  G+++HA    S   
Sbjct: 66  SGNLNDALNLL-HSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKL 124

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             D+ +S+ I+ MY  CG+  D++ +F+     D   +  ++SG   N     A+S++ +
Sbjct: 125 RNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLE 184

Query: 584 M-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +   + + PD FT   + KA + +  +E G  +HA  +K    SD FVG +L+ MY KCG
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCG 244

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM---KAHGVEPDSVTFIG 699
            +E A  +F+ M  RN V WN+++   +++G   E   +F+ +   +  G+ PD  T + 
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           V+ AC+  G V       H +  K GI  EV   + LVD   + G   EA  L
Sbjct: 305 VIPACAAVGEVRMGMV-VHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARAL 356


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 263/827 (31%), Positives = 401/827 (48%), Gaps = 127/827 (15%)

Query: 213 AKFLFDGMQERDVVLW-KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           A++  D +  RD  +    +L  YA  G   EV   F    R G+  D  ++ CVL    
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 272 DLGKR-HEEQVQAYAIK--------------LLLYNN---------------NSNVVLWN 301
            +  R   EQ+    +K              + +Y                   NVV W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             L+G      +   +  F  M    +  +  TF   L+AVA    L+LGQ++H  ++K 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 362 GFYSAVIVGNSLINMYSKMGCV-----------------------------CGL------ 386
           G  S+V V NSL+NMY+K G V                             C L      
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 387 --------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                   +  Q T A+V++  ++L + L L++Q+H   +K+       V TAL D Y +
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQ-LALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 439 NGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
            G +A+A  +F    G  ++ +W A+I G I + +   A+ LFS M       +E T + 
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +KA   +L      Q+HA  +K+ ++    V + +L  Y K G+  DA SIF  I   D
Sbjct: 410 MLKASLSIL----PPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKD 465

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIH 616
            VAW+ M+S     G+ + A  ++++M + G+ P+EFT + ++ A +C +A ++QGRQ H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  IK        V  +LV MY++ GNI+ A I+F++   R+ V WN+M+ G AQHG   
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + ++ F  M+A G++ D VTF+ V+  C++ GLV E  + F  M   + I P +EHY+ +
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD   RAG+  E   LI  MPF A A + R LLGACRV  + E GK+ A+KL++LEP DS
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDS 705

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
           S YVLLSNI+AAA +W +    R  M  + VKK+                        +D
Sbjct: 706 STYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSD 765

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I+ K++ +I R+K+ GY P+T FVL D+ E++KE  L  HSE+LA A+GLI+TPP + +
Sbjct: 766 QIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPL 825

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                + ++E +    +RFHH   G C C D
Sbjct: 826 QIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGD 872



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 251/593 (42%), Gaps = 99/593 (16%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN---NLMTMYSRCGSLVYARRLFDKMP 115
           +L+   S  D +LG+  H   +      DR   +   +L+ MY +CGS+     +F+ MP
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGH--DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMP 162

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +++++W S+L   AH     A+  +E   LF  +R    + +  T A +L    S G +
Sbjct: 163 KKNVVTWTSLLTGCAH-----AQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH  ++K G     FV  +L+N+Y+K G + +AK +F+ M+ RD+V W  ++   
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 236 AENGFGEEVFHLFVDLHRS-------------GLCPDDESV-------QCVLG------- 268
             N    E   LF +   +              LC + + +        CVL        
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 269 ----VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                ++D   +  E   A  I   +   + NVV W   +SG +Q GD   A+  F  M 
Sbjct: 338 NVMTALADAYSKCGELADALNI-FSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--- 381
              V  +  T+   L A        L  QIH   +K+ +     VG +L+  YSK G   
Sbjct: 397 EDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTE 452

Query: 382 ----------------------------------------CVCGLRTDQFTLASVLRASS 401
                                                    + G++ ++FT++SV+ A +
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
               G+   +Q H  +IK        VS+AL+ +Y R G++  A+ +FE +   DL +WN
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHA 516
           +MI GY     S KA+E F  M  SG ++D +T    +  C    ++ +G+Q     +  
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           + +    E   C    ++D+Y + G + +  S+  D+P P   + W T++  C
Sbjct: 633 HKINPTMEHYAC----MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGAC 681



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 32/351 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S   L LG+  HA+ +        F+ N+LM MY++CG +  A+ +F+ M  R
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWN+++A     G    E   E  +LF   R ++   ++ T A ++KLC +   +  
Sbjct: 266 DMVSWNTLMA-----GLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERDVVLWKVMLRAYA 236
           +  +H   LK G      V  AL + YSK G++ +A  +F      R+VV W  ++    
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV-ISDLGKRHEEQV-------------- 281
           +NG       LF  +    + P++ +   +L   +S L  +   QV              
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTA 440

Query: 282 --QAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
              +Y        A+ +       +VV W+  LS + Q GD  GA   F  M    ++ +
Sbjct: 441 LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPN 500

Query: 332 SVTFLVALAAVA-GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             T    + A A  +  ++ G+Q H  ++K  ++ A+ V ++L++MYS+ G
Sbjct: 501 EFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKG 551


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/714 (32%), Positives = 365/714 (51%), Gaps = 97/714 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +V  WN  +S Y+  G  H AI CF  ++  S ++ D  TF   L A  GT  L  G++I
Sbjct: 181 DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA-CGT--LVDGRKI 237

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------ 384
           H    K GF   V V  SLI+MYS+ G                                 
Sbjct: 238 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 297

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G++ +  T+ S+L     L + +  +  IH++ IK+    D FVS A
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGD-ISTAMLIHLYVIKHGLEFDLFVSNA 356

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI++Y + G++ +A   F+     D+ +WN++I  Y  +++   A   F  M  +G + D
Sbjct: 357 LINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPD 416

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIF 550
            +T+ +           K  + +H + M+ G+ + D+ + + ++DMY K G +  A  +F
Sbjct: 417 LLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF 476

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTAL 609
             IP  D ++W T+I+G   NG    A+ +Y  M     ++P++ T+  ++ A + + AL
Sbjct: 477 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 536

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           +QG +IH  +IK +   D FV   L+D+Y KCG + DA  LF Q+   ++V WNA++   
Sbjct: 537 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG+ E+TLKLF +M   GV+PD VTF+ +LSACS++G V E    F LM+E YGI+P 
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPS 655

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           ++HY  +VD LGRAG  + A + I  MP +  AS+  ALLGACR+ G+ E GK+ +++L 
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
            ++  +   YVLLSNI+A   +W+ V   R   + + +KK P                  
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 775

Query: 833 ------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I+ ++  L  ++K  GY+PD  FVL DVEE+EKE  L  HSE+LA A+G+IS
Sbjct: 776 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 835

Query: 887 TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           TPP S I                     ++ +E +   +NRFHH +DG+C C D
Sbjct: 836 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGD 889



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 259/588 (44%), Gaps = 83/588 (14%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S++     K  HA ++ + ++   F++  L+ +Y+  G +  +R  FD++P +D+ +WNS
Sbjct: 128 SSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNS 187

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +++AY H+G  + E +   ++L   L  S       T  P+LK C   G +     +H +
Sbjct: 188 MISAYVHNGHFH-EAIGCFYQL---LLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCW 240

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A K+G  W+ FV+ +L+++YS+FG    A+ LFD M  RD+  W  M+    +NG   + 
Sbjct: 241 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 300

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK----LLLYNNN----- 294
             +  ++   G+  +  +V  +L V   LG       +  Y IK      L+ +N     
Sbjct: 301 LDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360

Query: 295 -------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                              ++VV WN  ++ Y Q  D   A   FV M  +  Q D +T 
Sbjct: 361 YAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTL 420

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCV----------- 383
           +   + VA + +    + +HG  ++ G+    V++GN++++MY+K+G +           
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIP 480

Query: 384 ----------------CGLRTD-----------------QFTLASVLRASSSLPEGLHLS 410
                            GL ++                 Q T  S+L A + +   L   
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV-GALQQG 539

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            +IH   IK +   D FV+T LIDVY + G + +A  LF         TWNA+I  + + 
Sbjct: 540 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            ++ K L+LF  M   G + D +T  + + AC     +++GK       + G +  L   
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHY 659

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             ++D+  + G +  A     D+P  PD   W  ++  C  +G  +L 
Sbjct: 660 GCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG 707



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 193/389 (49%), Gaps = 12/389 (3%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G + ++     +  +S+  P     +K +H   +    V   F+ST L+++Y   G ++ 
Sbjct: 114 GNQNEEIDFNFLFDSSTKTP----FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 169

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACG 503
           +   F+     D+  WN+MI  Y+ + + H+A+  F  +    E R D  T    +KACG
Sbjct: 170 SRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG 229

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L+    G+++H +A K GF+ ++ V++ ++ MY + G    A+S+F+D+P  D  +W  
Sbjct: 230 TLV---DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNA 286

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MISG + NG    AL +  +MRL G+  +  T   ++     L  +     IH  +IK  
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              D FV  +L++MYAK GN+EDA   F+QM + + V WN+++    Q+ +       F 
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406

Query: 684 DMKAHGVEPDSVTFIGVLS--ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
            M+ +G +PD +T + + S  A S     S +   F +MR  + +E +V   + +VD   
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF-IMRRGWLME-DVVIGNAVVDMYA 464

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLG 770
           + G    A ++   +P +   S +  + G
Sbjct: 465 KLGLLDSAHKVFEIIPVKDVISWNTLITG 493



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 38/327 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL       D+      H  ++      D F++N L+ MY++ G+L  AR+ F +M   
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380

Query: 118 DLISWNSILAAYAHSGEGNAENVT-EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           D++SWNSI+AAY    E N + VT  GF  F  ++ +      LTL  L  +   S    
Sbjct: 381 DVVSWNSIIAAY----EQNDDPVTAHGF--FVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 177 ASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            S +VHG+ ++ G + ++ V G A+V++Y+K G +  A  +F+ +  +DV+ W  ++  Y
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494

Query: 236 AENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLGVISDLG------KRHEEQVQAY---- 284
           A+NG   E   ++  +     + P+  +   +L   + +G      K H   ++      
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 554

Query: 285 -------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                              A+ L       + V WN  +S +   G     ++ F  M+ 
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQ 352
             V+ D VTF+  L+A + +  +  G+
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGK 641



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 14/184 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SIL        L  G   H R++ ++   D F+   L+ +Y +CG LV A  LF ++P
Sbjct: 523 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 582

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               ++WN+I++   H   G+AE      +LF  + +       +T   LL  C  SG+V
Sbjct: 583 QESSVTWNAIIS--CHGIHGHAEKT---LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 637

Query: 176 ----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKV 230
               W    +  Y +K  L       G +V++  + G +  A  F+ D   + D  +W  
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKH----YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 693

Query: 231 MLRA 234
           +L A
Sbjct: 694 LLGA 697


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 280/926 (30%), Positives = 440/926 (47%), Gaps = 120/926 (12%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
             +  H + +    + + FL+N L+ +Y R G L  A++LFD+M +R+L++W  +++ Y  
Sbjct: 90   ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 132  SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS--ETVHGYALKIG 189
            +G+ +     E    FR +  +    +       L+ C  SG         +HG   K  
Sbjct: 150  NGKPD-----EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTR 204

Query: 190  LVWDEFVSGALVNIY-SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
               D  V   L+++Y S      +A+ +FDG+  R+ + W  ++  Y+  G     + LF
Sbjct: 205  YGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLF 264

Query: 249  VDLHRSGLC----PDD-----------ESVQCVLGVISDLGKRHEEQ------------V 281
              + + GL     P++            SV   L V+  +  R E+             V
Sbjct: 265  SSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALV 324

Query: 282  QAYAIKLLLYNNNS--------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
              +A   L  +  +        NVV  N  + G ++      A + F  M +  V  +S 
Sbjct: 325  SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 383

Query: 334  TFLVALAAVAG----TDNLNLGQQIHGTTLKSGFY-SAVIVGNSLINMYSKMGCVC---- 384
            +++V L+A +      +    G+++H   +++G   + V +GN L+NMY+K G +     
Sbjct: 384  SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 443

Query: 385  ---------------------------------------GLRTDQFTLASVLRASSSLPE 405
                                                   G     FTL S L + +SL  
Sbjct: 444  VFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLG- 502

Query: 406  GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
             + L +QIH   +K     D  VS AL+ +Y   G   E   +F     +D  +WN++I 
Sbjct: 503  WIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIG 562

Query: 466  GYILSNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
                S  S  +A++ F  M   G  L  +T    + A   L + +   Q+HA  +K    
Sbjct: 563  ALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLS 622

Query: 525  LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             D  + + +L  Y KCG M + + IF  +    D+V+W +MISG + N     A+ +   
Sbjct: 623  DDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF 682

Query: 584  MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            M   G   D FTFA ++ A + +  LE+G ++HA  I+    SD  VG +LVDMY+KCG 
Sbjct: 683  MMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGR 742

Query: 644  IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            I+ A   F+ M +RN   WN+M+ G A+HG+GE+ LKLF  M   G  PD VTF+GVLSA
Sbjct: 743  IDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSA 802

Query: 704  CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
            CS+ G V E +E+F  M E Y + P VEH+S +VD LGRAG+  E G+ I SMP + +  
Sbjct: 803  CSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVL 862

Query: 764  MHRALLGA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
            + R +LGA CR  G +TE G+  AE L+ LEP ++  YVLL+N++A+  +W+DV  AR  
Sbjct: 863  IWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTA 922

Query: 822  MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
            MK   VKK+                         DLI+ K+  L +++++ GY+P T + 
Sbjct: 923  MKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYA 982

Query: 859  LLDVEEEEKERALYYHSEKLARAYGL 884
            L D+E E KE  L YHSEK+A A+ L
Sbjct: 983  LFDLELENKEELLSYHSEKIAVAFVL 1008



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 194/700 (27%), Positives = 314/700 (44%), Gaps = 104/700 (14%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARRLFDKMPDRDLISWNSILAAY 129
           LG   H  I  +    D  + N L++MY  C  S   AR +FD +  R+ ISWNSI++ Y
Sbjct: 192 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 251

Query: 130 AHSGEGNAENVTEGFRLFRSL-RESITFT---SRLTLAPLLKLCLSSG--YVWASETVHG 183
           +  G+         + LF S+ +E + F+   +  T   L+    SS    +   E +  
Sbjct: 252 SRRGDA-----VSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLA 306

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE- 242
              K G + D +VS ALV+ +++FG   +AK +F+ M  R+VV    ++    +   GE 
Sbjct: 307 RVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 366

Query: 243 --EVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNS 295
             +VFH   DL    +  + +S   +L   S+      G+R   +V A+ I+  L +N  
Sbjct: 367 AAKVFHEMKDL----VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKV 422

Query: 296 NV-----------------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
            +                             V WN  +SG  Q   +  A E F  M R+
Sbjct: 423 AIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRT 482

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---- 382
                + T +  L++ A    + LG+QIH   LK G  + V V N+L+ +Y++ GC    
Sbjct: 483 GSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC 542

Query: 383 -----------------VCGLRTD-----------------------QFTLASVLRASSS 402
                            V G  +D                       + T  ++L A SS
Sbjct: 543 LKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSS 602

Query: 403 LPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATW 460
           L   LH +S QIH   +K     D+ +  AL+  Y + G M E E +F    +  D  +W
Sbjct: 603 L--SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSW 660

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N+MI GYI +   HKA++L   M   G+RLD  T AT + AC  +  L++G ++HA  ++
Sbjct: 661 NSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIR 720

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +  E D+ V S ++DMY KCG +  A   F  +P  +  +W +MISG   +G  + AL +
Sbjct: 721 ACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKL 780

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYA 639
           + +M L G  PD  TF  ++ A S +  +E+G +   ++ ++   S      S +VD+  
Sbjct: 781 FTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLG 840

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEET 678
           + G +++       M M+ N ++W  +L G     NG  T
Sbjct: 841 RAGKLDEVGDFINSMPMKPNVLIWRTVL-GACCRANGRNT 879



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 179/735 (24%), Positives = 313/735 (42%), Gaps = 95/735 (12%)

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
           F+S  T   L+     S     +  +H  ++K G V + F+S  L+NIY + G +  A+ 
Sbjct: 68  FSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 127

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD M  R++V W  ++  Y +NG  +E    F D+ R+G  P+  +    L    + G 
Sbjct: 128 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 187

Query: 276 ----------------RHEEQVQAYAIKLLLYN------NNS----------NVVLWNKK 303
                           R+   V    + + +Y       N++          N + WN  
Sbjct: 188 SGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSI 247

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQY----DSVTF--LVALAAVAGTDNLNLGQQIHGT 357
           +S Y + GD   A + F +M +  + +    +  TF  L+  A  +    L + +Q+   
Sbjct: 248 ISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLAR 307

Query: 358 TLKSGFYSAVIVGNSLI-------------NMYSKMGC---------------------- 382
             KSGF   + V ++L+             N++ +MG                       
Sbjct: 308 VEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAA 367

Query: 383 ---------VCGLRTDQF-TLASVLRASSSLPEGLHLSKQIHVHAIK----NDTVADSFV 428
                    + G+ +D +  L S     S L EG    +++H H I+    ++ VA   +
Sbjct: 368 AKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVA---I 424

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
              L+++Y ++G++A+A  +FE     D  +WN++I G   +  S  A E F  M  +G 
Sbjct: 425 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGS 484

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
                T+ + + +C  L  +  G+Q+H   +K G + D+ VS+ +L +Y + G   +   
Sbjct: 485 MPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLK 544

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           +F+ +P  D V+W ++I G + + E  +  A+  + QM   G      TF  ++ A S L
Sbjct: 545 VFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSL 603

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAM 665
           +  E   QIHA ++K   S D  +G +L+  Y KCG + +   +F +M + R+ V WN+M
Sbjct: 604 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 663

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G   +    + + L   M   G   DS TF  +LSAC+    +    E  H    +  
Sbjct: 664 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME-VHACGIRAC 722

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           +E +V   S LVD   + GR   A      MP     S +  + G  R     +  K   
Sbjct: 723 LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 782

Query: 786 EKLMALEPFDSSAYV 800
             ++  +P D   +V
Sbjct: 783 RMMLDGQPPDHVTFV 797



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 188/409 (45%), Gaps = 18/409 (4%)

Query: 462 AMIFGYILSNNSHKALE-LFSHMHTSGERLDEITIATAVKACGCLLMLKQG-------KQ 513
           +++F  +  N   K+L+ L  H  TS    +  T+ ++ +    L+   QG       ++
Sbjct: 34  SLLFKPLNPNQCTKSLQDLVDHYKTSTSHCN-TTLFSSSETFESLINRYQGSCCSEEARE 92

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H  ++K GF  +L +S+ ++++YV+ G +  AQ +F+++   + V W  +ISG   NG+
Sbjct: 93  LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 152

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKA--SSCLTALEQGRQIHANLIKLDCSSDPFVG 631
            D A + +  M  +G +P+ + F   ++A   S  +  + G QIH  + K    SD  V 
Sbjct: 153 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 212

Query: 632 ISLVDMYAKC-GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             L+ MY  C  +  DA  +F  + +RN++ WN+++   ++ G+      LF  M+  G+
Sbjct: 213 NVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGL 272

Query: 691 ----EPDSVTFIGVL-SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
               +P+  TF  ++ +ACS         E      EK G   ++   S LV    R G 
Sbjct: 273 GFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGL 332

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           T +A  +   M      SM+  ++G  + Q   E    V  ++  L   +S +YV+L + 
Sbjct: 333 TDDAKNIFEQMGVRNVVSMNGLMVGLVK-QKQGEAAAKVFHEMKDLVGINSDSYVVLLSA 391

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPD 854
           F+  +  ++      E+    ++    D   A   GL+    + G + D
Sbjct: 392 FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 440



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 6/243 (2%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           S S ++  FLQ        S   + +IL    S S   +    HA +L      D  + N
Sbjct: 570 SVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 629

Query: 93  NLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
            L++ Y +CG +    ++F +M + RD +SWNS+++ Y H+     E + +   L   + 
Sbjct: 630 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN-----ELLHKAMDLVWFMM 684

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           +        T A +L  C S   +     VH   ++  L  D  V  ALV++YSK G+I 
Sbjct: 685 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 744

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A   F+ M  R+V  W  M+  YA +G GE+   LF  +   G  PD  +   VL   S
Sbjct: 745 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 804

Query: 272 DLG 274
            +G
Sbjct: 805 HVG 807



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 34/316 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S L    S   ++LG+  H   L      D  ++N L+ +Y+  G      ++F  MP+ 
Sbjct: 493 STLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY 552

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWNS++ A + S      +V++  + F  +       SR+T   +L    S      
Sbjct: 553 DQVSWNSVIGALSDS----EASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 608

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYA 236
           S  +H   LK  L  D  +  AL++ Y K G++ E + +F  M E RD V W  M+  Y 
Sbjct: 609 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 668

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNN- 294
            N    +   L   + + G   D  +   +L   + +       +V A  I+  L ++  
Sbjct: 669 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 728

Query: 295 ---------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       NV  WN  +SGY + G    A++ F  M+   
Sbjct: 729 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 788

Query: 328 VQYDSVTFLVALAAVA 343
              D VTF+  L+A +
Sbjct: 789 QPPDHVTFVGVLSACS 804


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/713 (32%), Positives = 376/713 (52%), Gaps = 94/713 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           N+  WN  +S Y++ G    +++C   ++  S V+ D  TF   L A     +L  G+++
Sbjct: 113 NIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKM 169

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------C----- 384
           H   LK GF   V V  SLI++YS+ G V                         C     
Sbjct: 170 HCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNV 229

Query: 385 --GLRT-DQFTLASVLRASSSLPEGLHLSKQ---------IHVHAIKNDTVADSFVSTAL 432
              LR  D+     V   + ++   L +  Q         +H++ IK+   +D FVS AL
Sbjct: 230 AEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNAL 289

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I++Y + G + +A+ +F+  +  DL +WN++I  Y  +++   AL  F  M   G R D 
Sbjct: 290 INMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDL 349

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T+ +     G L   + G+ +H + ++  + E+D+ + + +++MY K G++  A+++F 
Sbjct: 350 LTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFE 409

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALE 610
            +P+ D ++W T+I+G   NG    A+  Y+ M     +VP++ T+  ++ A S + AL+
Sbjct: 410 QLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQ 469

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QG +IH  LIK     D FV   L+DMY KCG +EDA  LF ++    +V WNA++  L 
Sbjct: 470 QGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLG 529

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG+GE+ L+LF+DM+A GV+ D +TF+ +LSACS++GLV EA   F  M+++Y I+P +
Sbjct: 530 IHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNL 589

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           +HY  +VD  GRAG  ++A  L+ +MP +A AS+   LL ACR+ G+ E G + +++L+ 
Sbjct: 590 KHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLE 649

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           ++  +   YVLLSNI+A   +W+     R   + + ++K P                   
Sbjct: 650 VDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQ 709

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                  I+ ++  L  ++K  GYVPD  FVL DVEE+EKE  L  HSE+LA  +G+IST
Sbjct: 710 SHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIIST 769

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           PP S I                     ++ +E +   +NRFHH +DG+C C D
Sbjct: 770 PPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGD 822



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 230/462 (49%), Gaps = 27/462 (5%)

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------CVC- 384
           +T LV L A  G  +L+       TT K      +   NS+++ Y + G       CV  
Sbjct: 86  LTQLVTLYATLGDLSLS------STTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTE 139

Query: 385 -----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                G+R D +T   VL+A  SL +G    +++H   +K     D +V+ +LI +Y R 
Sbjct: 140 LLSLSGVRPDFYTFPPVLKACLSLADG----EKMHCWVLKMGFEHDVYVAASLIHLYSRF 195

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G++  A  +F +    D+ +WNAMI G+  + N  +AL +   M T   ++D +T+++ +
Sbjct: 196 GAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSML 255

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
             C     +  G  +H Y +K G E D+ VS+ +++MY K G + DAQ +F+ +   D V
Sbjct: 256 PICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLV 315

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +W ++I+    N +   AL  + +M   G+ PD  T   L      L+    GR +H  +
Sbjct: 316 SWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFV 375

Query: 620 IKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++      D  +G +LV+MYAK G+I+ A  +F+Q+  R+ + WN ++ G AQ+G   E 
Sbjct: 376 VRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEA 435

Query: 679 LKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
           +  +  M +   + P+  T++ +L A S+ G + +  +  H    K  +  +V   + L+
Sbjct: 436 IDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK-IHGRLIKNCLFLDVFVATCLI 494

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           D  G+ GR ++A  L   +P E S   + A++ +  + G  E
Sbjct: 495 DMYGKCGRLEDAMSLFYEIPQETSVPWN-AIISSLGIHGHGE 535



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 258/604 (42%), Gaps = 114/604 (18%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S +++ + K  HA +L   +  D  L   L+T+Y+  G L  +   F  +  +++ SWNS
Sbjct: 60  SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119

Query: 125 ILAAYAHSG--EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
           +++AY   G    + + VTE   L     +  TF       P+LK CLS       E +H
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTF------PPVLKACLSLA---DGEKMH 170

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG--- 239
            + LK+G   D +V+ +L+++YS+FG +  A  +F  M  RDV  W  M+  + +NG   
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230

Query: 240 ----------------------------------FGEEVFHLFVDLHRSGLCPDDESVQC 265
                                              G  + HL+V  H  GL  D      
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKH--GLESDVFVSNA 288

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           ++ + S  G+  + Q     +++       ++V WN  ++ Y Q  D   A+  F  M+ 
Sbjct: 289 LINMYSKFGRLQDAQRVFDGMEV------RDLVSWNSIIAAYEQNDDPVTALGFFKEMLF 342

Query: 326 SNVQYDSVTFLVALAAVAGT-DNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSKMGCV 383
             ++ D +T +V+LA++ G   +  +G+ +HG  ++  +    +++GN+L+NMY+K+G +
Sbjct: 343 VGMRPDLLT-VVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSI 401

Query: 384 CGLRT--------------------------------------------DQFTLASVLRA 399
              R                                             +Q T  S+L A
Sbjct: 402 DCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPA 461

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            S +   L    +IH   IKN    D FV+T LID+Y + G + +A  LF          
Sbjct: 462 YSHV-GALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP 520

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-----QM 514
           WNA+I    +  +  KAL+LF  M   G + D IT  + + AC    ++ + +       
Sbjct: 521 WNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQ 580

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGE 573
             Y +K   +   C    ++D++ + G +  A ++ +++P   D + W T+++ C  +G 
Sbjct: 581 KEYRIKPNLKHYGC----MVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGN 636

Query: 574 EDLA 577
            +L 
Sbjct: 637 AELG 640



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 207/442 (46%), Gaps = 68/442 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+  +S +D   G+  H  +L      D ++  +L+ +YSR G++  A ++F  MP RD
Sbjct: 156 VLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRD 212

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           + SWN++++ +  +G     NV E  R+   ++        +T++ +L +C  S  V   
Sbjct: 213 VGSWNAMISGFCQNG-----NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG 267

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             VH Y +K GL  D FVS AL+N+YSKFG++++A+ +FDGM+ RD+V W  ++ AY +N
Sbjct: 268 VLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQN 327

Query: 239 GFGEEVFHLFVDLHRSGLCPD---DESVQCVLGVISDLGKRHEEQVQAYAIKL------L 289
                    F ++   G+ PD     S+  + G +SD  +R    V  + ++       +
Sbjct: 328 DDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSD--RRIGRAVHGFVVRCRWLEVDI 385

Query: 290 LYNN-----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           +  N                       + +V+ WN  ++GY Q G    AI+ + NM+  
Sbjct: 386 VIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEE 444

Query: 327 --NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
              +  +  T++  L A +    L  G +IHG  +K+  +  V V   LI+MY K    C
Sbjct: 445 GRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGK----C 500

Query: 385 GLRTDQFTLASVLRASSSLP---------------EGLHLSKQIHVHAIKNDTVADSFVS 429
           G   D  +L   +   +S+P               + L L K +    +K D +  +FVS
Sbjct: 501 GRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHI--TFVS 558

Query: 430 TALIDVYCRNGSMAEAEYLFEN 451
             L+     +G + EA++ F+ 
Sbjct: 559 --LLSACSHSGLVDEAQWCFDT 578



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           ++++KQ+H   +      D  + T L+ +Y   G ++ +   F++    ++ +WN+M+  
Sbjct: 64  INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123

Query: 467 YILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           Y+       +++  + + + SG R D  T    +KAC   L L  G++MH + +K GFE 
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEH 180

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D+ V++ ++ +Y + GA+  A  +F D+P  D  +W  MISG   NG    AL +  +M+
Sbjct: 181 DVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMK 240

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
              V  D  T + ++   +    +  G  +H  +IK    SD FV  +L++MY+K G ++
Sbjct: 241 TEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQ 300

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           DA  +F  M++R+ V WN+++    Q+ +    L  F++M   G+ PD +T + + S
Sbjct: 301 DAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 46/339 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L     ++D++ G   H  ++      D F++N L+ MYS+ G L  A+R+FD M  R
Sbjct: 253 SMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR 312

Query: 118 DLISWNSILAAYAHSGEGNAENVTE-GF---RLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           DL+SWNSI+AAY    E N + VT  GF    LF  +R  +     LT+  L  +     
Sbjct: 313 DLVSWNSIIAAY----EQNDDPVTALGFFKEMLFVGMRPDL-----LTVVSLASIFGQLS 363

Query: 174 YVWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                  VHG+ ++   L  D  +  ALVN+Y+K G I  A+ +F+ +  RDV+ W  ++
Sbjct: 364 DRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLI 423

Query: 233 RAYAENGFGEEVFHLFVDLHRSG--LCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLL 289
             YA+NG   E    + ++   G  + P+  +   +L   S +G   +  ++    IK  
Sbjct: 424 TGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNC 482

Query: 290 LYNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFV 321
           L+ +                                V WN  +S     G    A++ F 
Sbjct: 483 LFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFK 542

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           +M    V+ D +TF+  L+A + +  ++  Q    T  K
Sbjct: 543 DMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQK 581



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 15/193 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SIL        L  G   H R++ +    D F+   L+ MY +CG L  A  LF ++P
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               + WN+I+++    G G      +  +LF+ +R        +T   LL  C  SG V
Sbjct: 515 QETSVPWNAIISSLGIHGHGE-----KALQLFKDMRADGVKADHITFVSLLSACSHSGLV 569

Query: 176 ----WASETVHG-YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
               W  +T+   Y +K  L       G +V+++ + G + +A  L   M  + D  +W 
Sbjct: 570 DEAQWCFDTMQKEYRIKPNLKH----YGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWG 625

Query: 230 VMLRAYAENGFGE 242
            +L A   +G  E
Sbjct: 626 TLLAACRIHGNAE 638


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 253/855 (29%), Positives = 410/855 (47%), Gaps = 129/855 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L  +   +++  G+  H  ++      + +    L+ MY++C  L  A+R+FD + D +
Sbjct: 166 VLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPN 225

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + W  + + Y  +G        E   +F  +R                           
Sbjct: 226 TVCWTCLFSGYVKAGLPE-----EAVIVFERMRGE------------------------- 255

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
                     G   D      ++N Y   GK+++A+ LF  M   DVV W VM+  + + 
Sbjct: 256 ----------GHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKR 305

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN 293
           G        F+++ +S +     ++  VL  I      DLG      V A AIKL L +N
Sbjct: 306 GCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL----VVHAEAIKLGLASN 361

Query: 294 ----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         N VLWN  + GY   G++H  +E F++M  
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS 421

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
           S    D  TF   L+  A + +L +G Q H   +K      + VGN+L++MY+K G +  
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALED 481

Query: 384 -----------------------------------------CGLRTDQFTLASVLRASSS 402
                                                    CG+ +D   LAS L+A ++
Sbjct: 482 ARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTN 541

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           +  GL+  KQ+H  ++K          ++LID+Y + G + +A  +F +   + + + NA
Sbjct: 542 V-HGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNA 600

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I GY   NN  +A+ LF  M T G    EIT AT V+AC     L  G Q H   +K G
Sbjct: 601 LIAGYS-QNNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWG 659

Query: 523 FELD---LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLAL 578
           F  +   L +S  +L +Y+    M +A ++F+++ +P  +  WT M+SG   NG  + AL
Sbjct: 660 FSSEGEYLGIS--LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
             Y +MR  G +PD+ TF  +++  S L++L +GR IH+ +  L    D     +L+DMY
Sbjct: 718 KFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777

Query: 639 AKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           AKCG+++ +  +F +M  R N V WN+++ G A++G  E+ LK+F+ M+   + PD +TF
Sbjct: 778 AKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +GVL+ACS+ G VS+  + F +M  +YGIE  V+H + +VD LGR G  +EA + I +  
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            +  A +  +LLGACR+ GD   G+  AE+L+ LEP +SSAYVLLSNI+A+  +W++  +
Sbjct: 898 LKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANA 957

Query: 818 ARGEMKRKNVKKDPA 832
            R  M+ + VKK P 
Sbjct: 958 LRKAMRDRGVKKVPG 972



 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 206/700 (29%), Positives = 352/700 (50%), Gaps = 64/700 (9%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S + F  + H ++ + L +GK+ H++ L      +  L N ++ +Y++C  + YA + F+
Sbjct: 61  SRKVFDEMPHRLALA-LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFN 119

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            + ++D+ +WNS+L+ Y+  G+       +  R F SL E++ F ++ T + +L      
Sbjct: 120 SL-EKDVTAWNSMLSMYSSIGQPG-----KVLRSFVSLFENLIFPNKFTFSIVLSTSARE 173

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             V     +H   +K+GL  + +  GALV++Y+K  ++ +A+ +FDG+ + + V W  + 
Sbjct: 174 TNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLF 233

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
             Y + G  EE   +F  +   G  PD  +   V+     LGK  + +        LL+ 
Sbjct: 234 SGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDAR--------LLFG 285

Query: 293 N--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
              + +VV WN  +SG+ + G    AIE F+NM +S+V+    T    L+A+    NL+L
Sbjct: 286 EMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G  +H   +K G  S + VG+SL++MYSK   +                           
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAH 405

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G   D FT  S+L ++ ++   L +  Q H   IK     + F
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLL-STCAVSHDLEMGSQFHSIIIKKKLTKNLF 464

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  AL+D+Y + G++ +A  +FE+    D  +WN +I GY+   N  +A +LF  M++ G
Sbjct: 465 VGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCG 524

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              D   +A+ +KAC  +  L QGKQ+H  ++K G +  L   S ++DMY KCG + DA+
Sbjct: 525 IVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDAR 584

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +P    V+   +I+G   N  E+ A+ ++ +M   GV P E TFA +V+A     
Sbjct: 585 KVFSSMPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTKGVNPSEITFATIVEACHKPE 643

Query: 608 ALEQGRQIHANLIKLDCSSD-PFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAM 665
           +L  G Q H  +IK   SS+  ++GISL+ +Y     + +A  LF ++   ++ VLW  M
Sbjct: 644 SLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGM 703

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           + G +Q+G  EE LK +++M+  G  PD  TF+ VL  CS
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCS 743



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 259/611 (42%), Gaps = 84/611 (13%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FL     S  S+ S   S+L      ++L LG   HA  +      + ++ ++L++MYS+
Sbjct: 315 FLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           C  +  A ++F+ + +R+ + WN+++  YAH+GE  +  V E   LF  ++ S       
Sbjct: 375 CEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGE--SHKVME---LFMDMKSSGYNIDDF 429

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   LL  C  S  +      H   +K  L  + FV  ALV++Y+K G + +A+ +F+ M
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM 489

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEE 279
            +RD V W  ++  Y ++    E F LF+ ++  G+  D   +   L   +++ G    +
Sbjct: 490 CDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK 549

Query: 280 QVQAYAIKL----LLYNNNS------------------------NVVLWNKKLSGYLQVG 311
           QV   ++K     +L+  +S                        +VV  N  ++GY Q  
Sbjct: 550 QVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-N 608

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS-AVIVG 370
           +   A+  F  M+   V    +TF   + A    ++L LG Q HG  +K GF S    +G
Sbjct: 609 NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLG 668

Query: 371 NSLINMY---SKMGCVCGLRT--------------------------------------- 388
            SL+ +Y    +M   C L +                                       
Sbjct: 669 ISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGA 728

Query: 389 --DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             DQ T  +VLR  S L   L   + IH          D   S  LID+Y + G M  + 
Sbjct: 729 LPDQATFVTVLRVCSVLSS-LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSS 787

Query: 447 YLF-ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
            +F E +   ++ +WN++I GY  +  +  AL++F  M  S    DEIT    + AC   
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847

Query: 506 LMLKQGKQMHAYAM-KSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTT 563
             +  G+++    + + G E  +   + ++D+  + G + +A          PD   W++
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907

Query: 564 MISGCVDNGEE 574
           ++  C  +G++
Sbjct: 908 LLGACRIHGDD 918



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 7/266 (2%)

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           L L+ GK +H+ ++  G + +  + + I+D+Y KC  +  A+  FN +   D  AW +M+
Sbjct: 74  LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSML 132

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           S     G+    L  +  +  + + P++FTF+I++  S+  T +E GRQIH ++IK+   
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            + + G +LVDMYAKC  + DA  +F  +   NTV W  +  G  + G  EE + +FE M
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +  G  PD + F+ V++     G + +A   F  M       P+V  ++ ++   G+ G 
Sbjct: 253 RGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMP-----SPDVVAWNVMISGHGKRGC 307

Query: 746 TKEAGELILSMPFEASASMHRALLGA 771
              A E  L+M  ++S    R+ LG+
Sbjct: 308 EIVAIEYFLNMR-KSSVKSTRSTLGS 332



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 20/247 (8%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           + +  H  +    + + ++LR     S L  G++ H+ I + +   D   +N L+ MY++
Sbjct: 720 YKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 779

Query: 101 CGSLVYARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           CG +  + ++FD+M  R +++SWNS++  YA +G        +  ++F S+R+S      
Sbjct: 780 CGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE-----DALKIFDSMRQSHIMPDE 834

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV---SGALVNIYSKFGKIREAKFL 216
           +T   +L  C  +G V     +  + + IG    E        +V++  ++G ++EA   
Sbjct: 835 ITFLGVLTACSHAGKVSDGRKI--FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892

Query: 217 FDGMQER-DVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
            +    + D  LW  +L   R + ++  GE      ++L      P + S   +L  I  
Sbjct: 893 IEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELE-----PQNSSAYVLLSNIYA 947

Query: 273 LGKRHEE 279
              R EE
Sbjct: 948 SQGRWEE 954


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/767 (31%), Positives = 375/767 (48%), Gaps = 123/767 (16%)

Query: 253 RSGLCPDD-------------ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVL 299
           ++G+CPD              ES+QC   V+ ++  +  +Q                   
Sbjct: 17  KNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQ------------------- 57

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN+KLS          A++ F  M  + ++ +   F   ++A A   + + G+ IH    
Sbjct: 58  WNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVC 117

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV------------------------------C----- 384
           K GF S +++ N+ + MY K   V                              C     
Sbjct: 118 KYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPR 177

Query: 385 --------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                   G   + +T  S+L+  +S  + L+  K IH   IK+    DS +  +L++VY
Sbjct: 178 ILIQLLVEGFEPNMYTFISILKTCASKGD-LNEGKAIHGQVIKSGINPDSHLWNSLVNVY 236

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + GS   A  +F      D+ +W A+I G++ +      L +F+ M   G   +  T  
Sbjct: 237 AKCGSANYACKVFGEIPERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFI 295

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + +++C  L  +  GKQ+HA  +K+  + +  V + ++DMY K   + DA++IFN +   
Sbjct: 296 SILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR 355

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D  AWT +++G   +G+ + A+  + QM+  GV P+EFT A  +   S +  L+ GRQ+H
Sbjct: 356 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 415

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           +  IK   S D FV  +LVDMYAKCG +EDA ++F  +  R+TV WN ++ G +QHG G 
Sbjct: 416 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGG 475

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + LK FE M   G  PD VTFIGVLSACS+ GL+ E  ++F+ + + YGI P +EHY+ +
Sbjct: 476 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 535

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG+  E    I  M   ++  +   +LGAC++ G+ E G+  A KL  LEP   
Sbjct: 536 VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 595

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
           S Y+LLSN+FAA   WDDVT+ R  M  + VKK+P                         
Sbjct: 596 SNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR 655

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I  K++ L +++   GY P+TD VL +V + EK+  L+YHSE+LA A+ L+ST     I
Sbjct: 656 EIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTI 715

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                ++N+E +    N FHH ++G C C +
Sbjct: 716 RIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQN 762



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 126/573 (21%), Positives = 232/573 (40%), Gaps = 89/573 (15%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           R++ +   PD  L ++L+ +Y +C SL  AR++ ++MP +D+  WN  L     S   + 
Sbjct: 14  RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKL-----SSANSP 68

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
             + E  +LF  +R +    ++   A L+    S G     E++H    K G   D  +S
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            A V +Y K   +      F  M   ++     +L  + +    ++   + + L   G  
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188

Query: 258 PDDESVQCVLGVISDLGKRHEEQV-----------------------------QAYAIKL 288
           P+  +   +L   +  G  +E +                                YA K+
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248

Query: 289 LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                  +VV W   ++G++  G   G +  F  M+      +  TF+  L + +   ++
Sbjct: 249 FGEIPERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSK----------------------------- 379
           +LG+Q+H   +K+       VG +L++MY+K                             
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367

Query: 380 ---------MGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
                    + C       G++ ++FTLAS L   S +   L   +Q+H  AIK     D
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT-LDSGRQLHSMAIKAGQSGD 426

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            FV++AL+D+Y + G + +AE +F+     D  +WN +I GY       KAL+ F  M  
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKC 540
            G   DE+T    + AC  + ++++GK+        Y +    E   C    ++D+  + 
Sbjct: 487 EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYAC----MVDILGRA 542

Query: 541 GAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNG 572
           G   + +S   ++    +V  W T++  C  +G
Sbjct: 543 GKFHEVESFIEEMKLTSNVLIWETVLGACKMHG 575



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           ++ K+I    IKN    DS + ++L++VY +  S+  A  + E     D+  WN  +   
Sbjct: 6   YILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSA 65

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
                  +A++LF  M  +  RL++   A+ + A   L     G+ +HA   K GFE D+
Sbjct: 66  NSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDI 125

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            +S+  + MY+K  ++ +    F  +   +  +   ++SG  D    D    I  Q+ + 
Sbjct: 126 LISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVE 185

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G  P+ +TF  ++K  +    L +G+ IH  +IK   + D  +  SLV++YAKCG+   A
Sbjct: 186 GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYA 245

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
             +F ++  R+ V W A++ G    G G   L++F  M A G  P+  TFI +L +CS
Sbjct: 246 CKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCS 302



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 168/349 (48%), Gaps = 42/349 (12%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SIL+   S  DL  GK+ H +++ S   PD  L N+L+ +Y++CGS  YA ++F ++P
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +RD++SW +++  +   G G+      G R+F  +       +  T   +L+ C S   V
Sbjct: 254 ERDVVSWTALITGFVAEGYGS------GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH   +K  L  ++FV  ALV++Y+K   + +A+ +F+ + +RD+  W V++  Y
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKL------ 288
           A++G GE+    F+ + R G+ P++ ++   L   S +       Q+ + AIK       
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDM 427

Query: 289 --------------------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                               ++++   + + V WN  + GY Q G    A++ F  M+  
Sbjct: 428 FVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDE 487

Query: 327 NVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
               D VTF+  L+A +       G  + N   +I+G T     Y+ ++
Sbjct: 488 GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMV 536



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 35/355 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++  A S  D   G+S HA +       D  ++N  +TMY +  S+    + F  M   
Sbjct: 95  SLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIE 154

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L S N++L+ +      + E   +G R+   L       +  T   +LK C S G +  
Sbjct: 155 NLASRNNLLSGFC-----DTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNE 209

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  +K G+  D  +  +LVN+Y+K G    A  +F  + ERDVV W  ++  +  
Sbjct: 210 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA 269

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQ------------ 280
            G+G  +  +F  +   G  P+  +   +L   S     DLGK+   Q            
Sbjct: 270 EGYGSGL-RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV 328

Query: 281 ----VQAYAIKLLLYNNNS--------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               V  YA    L +  +        ++  W   ++GY Q G    A++CF+ M R  V
Sbjct: 329 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 388

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           + +  T   +L+  +    L+ G+Q+H   +K+G    + V ++L++MY+K GCV
Sbjct: 389 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCV 443



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 142/304 (46%), Gaps = 5/304 (1%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           K++    +K+G   D  + S ++++YVKC ++  A+ +  ++P  D   W   +S     
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
                A+ +++ MR + +  ++F FA L+ A++ L     G  IHA + K    SD  + 
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            + V MY K  ++E+ +  FK M + N    N +L G       ++  ++   +   G E
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+  TFI +L  C+  G ++E  +  H    K GI P+   ++ LV+   + G    A +
Sbjct: 189 PNMYTFISILKTCASKGDLNEG-KAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACK 247

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           +   +P E       AL+     +G   +G  +  +++A E F+ + Y  +S I  + + 
Sbjct: 248 VFGEIP-ERDVVSWTALITGFVAEG-YGSGLRIFNQMLA-EGFNPNMYTFIS-ILRSCSS 303

Query: 812 WDDV 815
             DV
Sbjct: 304 LSDV 307


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 251/854 (29%), Positives = 414/854 (48%), Gaps = 136/854 (15%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           D  ++  ++ +YS  G   +++ +FD ++ +++  W  ++ AY  N   E+   +F +L 
Sbjct: 33  DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92

Query: 252 ----HRSGLCPDDESVQCVLGVIS---DLGKRH------------------EEQVQAY-- 284
               H+    PD+ ++ CV+   +   DLG                        +  Y  
Sbjct: 93  SVTEHK----PDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 148

Query: 285 ------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY--DSVTFL 336
                 A+K+  +    N+V WN  + G+ + G    +   F  M+     +  D  T +
Sbjct: 149 CGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLV 208

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC-------------- 382
             L   AG +++  G  +HG  +K G    ++V NSLI+MYSK  C              
Sbjct: 209 TVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSK--CRFLSEAQLLFDKND 266

Query: 383 -------------------VC--------------GLRTDQFTLASVLRASSSLPEGLHL 409
                              VC               ++ D+FT+ +VL       E L  
Sbjct: 267 KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSE-LQS 325

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            K++H ++ ++   ++  V+ A I  Y R G++  +E +F+  D   +++WNA++ GY  
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQ 385

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +++  KAL+L+  M  SG   D  TI + + AC  +  L  G+++H +A+++G  +D  +
Sbjct: 386 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 445

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
              +L +Y+ CG    AQ +F+ +     V+W  MI+G   NG  D A++++ QM   G+
Sbjct: 446 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 505

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P E     +  A S L+AL  G+++H   +K   + D FV  S++DMYAK G I  +  
Sbjct: 506 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 565

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++  ++   WN ++ G   HG G+E L+LFE M   G++PD  TF G+L ACS+ GL
Sbjct: 566 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 625

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V +  E F+ M   + IEP++EHY+ +VD LGRAGR  +A  LI  MP +  + +  +LL
Sbjct: 626 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 685

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            +CR+ G+   G+ VA KL+ LEP     YVL+SN+FA + +WDDV   RG MK   ++K
Sbjct: 686 SSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 745

Query: 830 DP----------------ADLIFAKVEGLIK-------RIKEGGYVPDTDFVLLDVEEEE 866
           D                  D +  ++E + +       +I   GY PDT  VL D+EEE+
Sbjct: 746 DAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEED 805

Query: 867 KERALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLYAN-- 903
           K   L  HSEKLA ++GL++T    P  V                   + N++ +  +  
Sbjct: 806 KIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNK 865

Query: 904 RFHHLRDGMCPCAD 917
           RFHH RDG+C C D
Sbjct: 866 RFHHFRDGICSCGD 879



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 193/700 (27%), Positives = 321/700 (45%), Gaps = 94/700 (13%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN-LMTMYSRCGSLVYARRLFDKMPDR 117
           +L+      D+ +G+  H  +  S+Q  + F+ N  ++TMYS CGS   +R +FDK+  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR----LTLAPLLKLCLSSG 173
           +L  WN+I++AY  +     E   +   +F  L   I+ T       TL  ++K C    
Sbjct: 64  NLFQWNAIVSAYTRN-----ELFEDAMSIFSEL---ISVTEHKPDNFTLPCVIKACAGLL 115

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   + +HG A K+ LV D FV  AL+ +Y K G + EA  +F+ M ER++V W  ++ 
Sbjct: 116 DLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIIC 175

Query: 234 AYAENGFGEEVFHLFVDL--HRSGLCPDDESVQCVL----------------GVISDLGK 275
            ++ENGF +E F+ F ++        PD  ++  VL                G+   LG 
Sbjct: 176 GFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGL 235

Query: 276 RHEEQVQAYAIKL-----------LLY--NNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
             E  V    I +           LL+  N+  N+V WN  + GY +  D          
Sbjct: 236 NEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQK 295

Query: 323 MIRSN--VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           M   +  ++ D  T L  L        L   +++HG + + G  S  +V N+ I  Y++ 
Sbjct: 296 MQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRC 355

Query: 381 GCVC-------------------------------------------GLRTDQFTLASVL 397
           G +C                                           GL  D FT+ S+L
Sbjct: 356 GALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLL 415

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A S + + LH  ++IH  A++N    D F+  +L+ +Y   G    A+ LF+  +   L
Sbjct: 416 LACSRM-KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 474

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN MI GY  +    +A+ LF  M + G +  EI I     AC  L  L+ GK++H +
Sbjct: 475 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCF 534

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           A+K+    D+ VSS I+DMY K G +  +Q IF+ +   D  +W  +I+G   +G    A
Sbjct: 535 ALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEA 594

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLV 635
           L ++ +M   G+ PD+FTF  ++ A S    +E G +    ++ L  + +P +     +V
Sbjct: 595 LELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLH-NIEPKLEHYTCVV 653

Query: 636 DMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           DM  + G I+DA  L ++M    ++ +W+++L     HGN
Sbjct: 654 DMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 693



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 127/564 (22%), Positives = 237/564 (42%), Gaps = 105/564 (18%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L       D+  G + H   +      +  + N+L+ MYS+C  L  A+ LFDK   +
Sbjct: 209 TVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKK 268

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR--ESITFTSRLTLAPLLKLCLSSGYV 175
           +++SWNS++  YA       E+V   F L + ++  ++       T+  +L +CL    +
Sbjct: 269 NIVSWNSMIGGYARE-----EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSEL 323

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            + + +HGY+ + GL  +E V+ A +  Y++ G +  ++ +FD M  + V  W  +L  Y
Sbjct: 324 QSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGY 383

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK------- 287
           A+N    +   L++ +  SGL PD  ++  +L   S +   H  E++  +A++       
Sbjct: 384 AQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 443

Query: 288 ------LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 L LY                 + ++V WN  ++GY Q G    AI  F  M+  
Sbjct: 444 FIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 503

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            +Q   +  +    A +    L LG+++H   LK+     + V +S+I+MY+K GC+   
Sbjct: 504 GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCI--- 560

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                                 LS++I     + D  +       +I  Y  +G   EA 
Sbjct: 561 ---------------------GLSQRIFDRLREKDVAS----WNVIIAGYGIHGRGKEAL 595

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            LFE                        K L L       G + D+ T    + AC    
Sbjct: 596 ELFE------------------------KMLRL-------GLKPDDFTFTGILMACSHAG 624

Query: 507 MLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVA 560
           +++ G     + ++ + ++   E   CV    +DM  + G + DA  +  ++P  PD   
Sbjct: 625 LVEDGLEYFNQMLNLHNIEPKLEHYTCV----VDMLGRAGRIDDALRLIEEMPGDPDSRI 680

Query: 561 WTTMISGCVDNGEEDLALSIYHQM 584
           W++++S C  +G   L   + +++
Sbjct: 681 WSSLLSSCRIHGNLGLGEKVANKL 704



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 158/315 (50%), Gaps = 6/315 (1%)

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV-STALIDVYCRNGSMAEAEYLFENKDG 454
           VL  +    + + + +++H     +    + FV +T +I +Y   GS +++  +F+    
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQ 513
            +L  WNA++  Y  +     A+ +FS + +  E + D  T+   +KAC  LL L  G+ 
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H  A K     D+ V + ++ MY KCG + +A  +F  +P  + V+W ++I G  +NG 
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182

Query: 574 EDLALSIYHQMRLS--GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              + + + +M +     VPD  T   ++   +    +E+G  +H   +KL  + +  V 
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-- 689
            SL+DMY+KC  + +A +LF + D +N V WN+M+ G A+  +   T  L + M+     
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 690 VEPDSVTFIGVLSAC 704
           ++ D  T + VL  C
Sbjct: 303 MKADEFTILNVLPVC 317



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 158/367 (43%), Gaps = 44/367 (11%)

Query: 41  FLQKSHFSSSSSSSQWFSILRH---AISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
            LQK     +   +  F+IL      +  S+L   K  H          +  + N  +  
Sbjct: 292 LLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAA 351

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           Y+RCG+L  + R+FD M  + + SWN++L  YA + +       +   L+  + +S    
Sbjct: 352 YTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPR-----KALDLYLQMTDSGLDP 406

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
              T+  LL  C     +   E +HG+AL+ GL  D F+  +L+++Y   GK   A+ LF
Sbjct: 407 DWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLF 466

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-R 276
           DGM+ R +V W VM+  Y++NG  +E  +LF  +   G+ P + ++ CV G  S L   R
Sbjct: 467 DGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 526

Query: 277 HEEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYL 308
             +++  +A+K  L  +                              +V  WN  ++GY 
Sbjct: 527 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 586

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKS 361
             G    A+E F  M+R  ++ D  TF   L A +       G +  N    +H    K 
Sbjct: 587 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 646

Query: 362 GFYSAVI 368
             Y+ V+
Sbjct: 647 EHYTCVV 653



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 5/259 (1%)

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           +   ++ACG    ++ G+++H     S  F  D  +++ I+ MY  CG+  D++ +F+ +
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQG 612
              +   W  ++S    N   + A+SI+ ++  ++   PD FT   ++KA + L  L  G
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           + IH    K+D  SD FVG +L+ MY KCG +E+A  +F+ M  RN V WN+++ G +++
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180

Query: 673 GNGEETLKLFEDM--KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           G  +E+   F +M        PD  T + VL  C+    + +     H +  K G+  E+
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEEL 239

Query: 731 EHYSFLVDALGRAGRTKEA 749
              + L+D   +     EA
Sbjct: 240 MVNNSLIDMYSKCRFLSEA 258


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 263/827 (31%), Positives = 401/827 (48%), Gaps = 127/827 (15%)

Query: 213 AKFLFDGMQERDVVLW-KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           A++  D +  RD  +    +L  YA  G   EV   F    R G+  D  ++ CVL    
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 272 DLGKR-HEEQVQAYAIK--------------LLLYNN---------------NSNVVLWN 301
            +  R   EQ+    +K              + +Y                   NVV W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             L+G      +   +  F  M    +  +  TF   L+AVA    L+LGQ++H  ++K 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 362 GFYSAVIVGNSLINMYSKMGCV-----------------------------CGL------ 386
           G  S+V V NSL+NMY+K G V                             C L      
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 387 --------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                   +  Q T A+V++  ++L + L L++Q+H   +K+       V TAL D Y +
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQ-LALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 439 NGSMAEAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
            G +A+A  +F    G  ++ +W A+I G I + +   A+ LFS M       +E T + 
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            +KA   +L      Q+HA  +K+ ++    V + +L  Y K G+  DA SIF  I   D
Sbjct: 410 MLKASLSIL----PPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKD 465

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIH 616
            VAW+ M+S     G+ + A  ++++M + G+ P+EFT + ++ A +C +A ++QGRQ H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  IK        V  +LV MY++ GNI+ A I+F++   R+ V WN+M+ G AQHG   
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + ++ F  M+A G++ D VTF+ V+  C++ GLV E  + F  M   + I P +EHY+ +
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD   RAG+  E   LI  MPF A A + R LLGACRV  + E GK+ A+KL++LEP DS
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDS 705

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
           S YVLLSNI+AAA +W +    R  M  + VKK+                        +D
Sbjct: 706 STYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSD 765

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I+ K++ +I R+K+ GY P+T FVL D+ E++KE  L  HSE+LA A+GLI+TPP + +
Sbjct: 766 QIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPL 825

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                + ++E +    +RFHH   G C C D
Sbjct: 826 QIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGD 872



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 251/593 (42%), Gaps = 99/593 (16%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN---NLMTMYSRCGSLVYARRLFDKMP 115
           +L+   S  D +LG+  H   +      DR   +   +L+ MY +CGS+     +F+ MP
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGH--DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMP 162

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +++++W S+L   AH     A+  +E   LF  +R    + +  T A +L    S G +
Sbjct: 163 KKNVVTWTSLLTGCAH-----AQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH  ++K G     FV  +L+N+Y+K G + +AK +F+ M+ RD+V W  ++   
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 236 AENGFGEEVFHLFVDLHRS-------------GLCPDDESV-------QCVLG------- 268
             N    E   LF +   +              LC + + +        CVL        
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 269 ----VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                ++D   +  E   A  I   +   + NVV W   +SG +Q GD   A+  F  M 
Sbjct: 338 NVMTALADAYSKCGELADALNI-FSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--- 381
              V  +  T+   L A        L  QIH   +K+ +     VG +L+  YSK G   
Sbjct: 397 EDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTE 452

Query: 382 ----------------------------------------CVCGLRTDQFTLASVLRASS 401
                                                    + G++ ++FT++SV+ A +
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
               G+   +Q H  +IK        VS+AL+ +Y R G++  A+ +FE +   DL +WN
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHA 516
           +MI GY     S KA+E F  M  SG ++D +T    +  C    ++ +G+Q     +  
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           + +    E   C    ++D+Y + G + +  S+  D+P P   + W T++  C
Sbjct: 633 HKINPTMEHYAC----MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGAC 681



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 32/351 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    S   L LG+  HA+ +        F+ N+LM MY++CG +  A+ +F+ M  R
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWN+++A     G    E   E  +LF   R ++   ++ T A ++KLC +   +  
Sbjct: 266 DMVSWNTLMA-----GLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERDVVLWKVMLRAYA 236
           +  +H   LK G      V  AL + YSK G++ +A  +F      R+VV W  ++    
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV-ISDLGKRHEEQV-------------- 281
           +NG       LF  +    + P++ +   +L   +S L  +   QV              
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTA 440

Query: 282 --QAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
              +Y        A+ +       +VV W+  LS + Q GD  GA   F  M    ++ +
Sbjct: 441 LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPN 500

Query: 332 SVTFLVALAAVA-GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             T    + A A  +  ++ G+Q H  ++K  ++ A+ V ++L++MYS+ G
Sbjct: 501 EFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKG 551


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 248/771 (32%), Positives = 385/771 (49%), Gaps = 79/771 (10%)

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           +  +++ + K G +  A+ LFD M +R VV W +++  YA N   +E F LF  + RS  
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141

Query: 257 C--PDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
           C  PD  +   +L   +D + +    QV A+A+KL  ++ N  + + N  L  Y +V   
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRRL 200

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A   F  +     + DSVTF          + L  G +      K G Y+  I     
Sbjct: 201 DLACVLFEEI----PEKDSVTF----------NTLITGYE------KDGLYTESI----- 235

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
            +++ KM    G +   FT + VL+A   L +   L +Q+H  ++      D+ V   ++
Sbjct: 236 -HLFLKMR-QSGHQPSDFTFSGVLKAVVGLHD-FALGQQLHALSVTTGFSRDASVGNQIL 292

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D Y ++  + E   LF+     D  ++N +I  Y  ++    +L  F  M   G      
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
             AT +     L  L+ G+Q+H  A+ +  +  L V + ++DMY KC    +A+ IF  +
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
           P    V+WT +ISG V  G     L ++ +MR S +  D+ TFA ++KAS+   +L  G+
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q+HA +I+     + F G  LVDMYAKCG+I+DA  +F++M  RN V WNA++   A +G
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           +GE  +  F  M   G++PDSV+ +GVL+ACS+ G V +  E F  M   YGI P+ +HY
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + ++D LGR GR  EA +L+  MPFE    M  ++L ACR+  +    +  AEKL ++E 
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652

Query: 794 F-DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
             D++AYV +SNI+AAA +W+ V   +  M+ + +KK PA                    
Sbjct: 653 LRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTH 712

Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
              D I  K+  L   I+  GY PDT  V+ DV+E+ K  +L YHSE+LA A+ LISTP 
Sbjct: 713 PNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPE 772

Query: 890 SS--VILSNKEPLY---------------------ANRFHHLRDGMCPCAD 917
               V++ N                           +RFHH  +G+C C D
Sbjct: 773 GCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGD 823



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 252/568 (44%), Gaps = 90/568 (15%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           TN +++ + + G +  AR LFD MPDR +++W  ++  YA +      +  E F+LFR +
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNS-----HFDEAFKLFRQM 136

Query: 151 --RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF--VSGALVNIYSK 206
               S T    +T   LL  C  +    A   VH +A+K+G   + F  VS  L+  Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
             ++  A  LF+ + E+D V +  ++  Y ++G   E  HLF+ + +SG  P D +   V
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256

Query: 267 LGVISDLGKRHE----EQVQAYAIK-------------LLLYNNNSNV------------ 297
           L  +  L   H+    +Q+ A ++              L  Y+ +  V            
Sbjct: 257 LKAVVGL---HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313

Query: 298 ---VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
              V +N  +S Y Q      ++  F  M        +  F   L+  A   +L +G+Q+
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSK----------------------MGCVCG------- 385
           H   L +   S + VGNSL++MY+K                         + G       
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433

Query: 386 --------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                         LR DQ T A+VL+AS+S    L L KQ+H   I++  + + F  + 
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFA-SLLLGKQLHAFIIRSGNLENVFSGSG 492

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y + GS+ +A  +FE     +  +WNA+I  +  + +   A+  F+ M  SG + D
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552

Query: 492 EITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
            ++I   + AC     ++QG +   A +   G        + +LD+  + G   +A+ + 
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612

Query: 551 NDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +++P  PD++ W+++++ C  +  + LA
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLA 640



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L  A + S L +G+  H + L ++      + N+L+ MY++C     A  +F  +P R
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             +SW ++++ Y   G   A     G +LF  +R S     + T A +LK   S   +  
Sbjct: 416 TTVSWTALISGYVQKGLHGA-----GLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H + ++ G + + F    LV++Y+K G I++A  +F+ M +R+ V W  ++ A+A+
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           NG GE     F  +  SGL PD  S+  VL   S  G
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 153/376 (40%), Gaps = 51/376 (13%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           ++ S+  FL+        S   +  +L+  +   D  LG+  HA  + +    D  + N 
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ 290

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++  YS+   ++  R LFD+MP+ D +S+N ++++Y+ + +  A         FR + + 
Sbjct: 291 ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA-----SLHFFREM-QC 344

Query: 154 ITFTSR-LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           + F  R    A +L +  +   +     +H  AL         V  +LV++Y+K     E
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ +F  + +R  V W  ++  Y + G       LF  +  S L  D  +   VL   + 
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464

Query: 273 -----LGKRHEEQVQAY----------------------------AIKLLLYNNNSNVVL 299
                LGK    Q+ A+                            A+++     + N V 
Sbjct: 465 FASLLLGK----QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQ 352
           WN  +S +   GD   AI  F  MI S +Q DSV+ L  L A +       GT+      
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580

Query: 353 QIHGTTLKSGFYSAVI 368
            I+G T K   Y+ ++
Sbjct: 581 PIYGITPKKKHYACML 596



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 130/284 (45%), Gaps = 42/284 (14%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +++ A  +K+GF+ D C S+ I++  ++ G +  A+ +++++P  + V+  TMISG V  
Sbjct: 33  RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92

Query: 572 GEE-------------------------------DLALSIYHQMRLSG--VVPDEFTFAI 598
           G+                                D A  ++ QM  S    +PD  TF  
Sbjct: 93  GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152

Query: 599 LVKASSCLTALEQGR--QIHANLIKLDCSSDPFVGIS--LVDMYAKCGNIEDAYILFKQM 654
           L+    C  A+ Q    Q+HA  +KL   ++PF+ +S  L+  Y +   ++ A +LF+++
Sbjct: 153 LLPG--CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             +++V +N ++ G  + G   E++ LF  M+  G +P   TF GVL A    GL   A 
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFAL 268

Query: 715 -ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +  H +    G   +    + ++D   +  R  E   L   MP
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/720 (32%), Positives = 378/720 (52%), Gaps = 96/720 (13%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N  ++V W+  +S Y        AI  F +M+      +   F     A +  +N++LG+
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 353 QIHGTTLKSGFY-SAVIVGNSLINMYSK-------------------------------- 379
            I G  LK+G++ S V VG +LI+M+ K                                
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 380 MG------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +G             + G   D+FTL+ V+ A + +   L L +Q H   +K+    D  
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGL-LSLGRQFHCLVMKSGLDLDVC 181

Query: 428 VSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-ALELFSHM 483
           V  +L+D+Y +   +GS+ +A  +F+     ++ +W A+I GY+ S    + A+ELF  M
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
                + +  T ++ +KAC  L  +  G+Q++A  +K       CV + ++ MY +CG M
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            +A+  F+ +   + V++ T+++    +   + A  +++++  +G   + FTFA L+  +
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           S + A+ +G QIH+ ++K    S+  +  +L+ MY++CGNIE A+ +F +M   N + W 
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWT 421

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           +M+ G A+HG     L+ F  M   GV P+ VT+I VLSACS+ GL+SE  ++F  M+ +
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVE 481

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           +GI P +EHY+ +VD LGR+G  +EA EL+ SMPF+A A + R  LGACRV G+ + GK 
Sbjct: 482 HGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKH 541

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------ 831
            AE ++  +P D +AY+LLSN+ A+A QW++V   R +MK +N+ K+             
Sbjct: 542 AAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVH 601

Query: 832 -----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                      A  I+ +++ L  +IKE GY+P TDFVL DVEEE+KE+ L+ HSEK+A 
Sbjct: 602 KFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAV 661

Query: 881 AYGLISTPPSS---------------------VILSNKEPLY--ANRFHHLRDGMCPCAD 917
           AYG IST  S                       I+  KE +   ANRFHH +DG C C D
Sbjct: 662 AYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCND 721



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/541 (23%), Positives = 233/541 (43%), Gaps = 86/541 (15%)

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RDL+SW+++++ YA     N E   E    F  + E   + +      + + C +   + 
Sbjct: 5   RDLVSWSALISCYA-----NNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENIS 59

Query: 177 ASETVHGYALKIGLVWDEFVSG-ALVNIYSKF-GKIREAKFLFDGMQERDVVLWKVMLRA 234
             + + G+ LK G    +   G AL++++ K  G +  A  +FD M +R+VV W +M+  
Sbjct: 60  LGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITR 119

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLL 289
           + + GF  +   LF+D+  SG  PD  ++  V+   ++     LG++    V    + L 
Sbjct: 120 FQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD 179

Query: 290 LYNNNS---------------------------NVVLWNKKLSGYLQVGD-NHGAIECFV 321
           +    S                           NV+ W   ++GY+Q G  +  AIE F+
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFL 239

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M++  V+ +  TF   L A A   ++ LG+Q++   +K    S   VGNSLI+MYS+ G
Sbjct: 240 EMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCG 299

Query: 382 CV-------------------------------------------CGLRTDQFTLASVLR 398
            +                                            G   + FT AS+L 
Sbjct: 300 NMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLS 359

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
            +SS+   +   +QIH   +K+   ++  +  ALI +Y R G++  A  +F      ++ 
Sbjct: 360 GASSIG-AIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVI 418

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAY 517
           +W +MI G+     + +ALE F  M  +G   +E+T    + AC  + ++ +G K   + 
Sbjct: 419 SWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSM 478

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDL 576
            ++ G    +   + ++D+  + G + +A  + N +P   D +   T +  C  +G  DL
Sbjct: 479 KVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDL 538

Query: 577 A 577
            
Sbjct: 539 G 539



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 123/233 (52%), Gaps = 12/233 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HF+ SS       +L+   + SD+ LG+  +A ++         + N+L++MYSRC
Sbjct: 246 VKPNHFTFSS-------VLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRC 298

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G++  AR+ FD + +++L+S+N+I+ AYA S      N  E F LF  +  + T  +  T
Sbjct: 299 GNMENARKAFDVLFEKNLVSYNTIVNAYAKS-----LNSEEAFELFNEIEGAGTGVNAFT 353

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    S G +   E +H   LK G   +  +  AL+++YS+ G I  A  +F+ M 
Sbjct: 354 FASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG 413

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           + +V+ W  M+  +A++GF       F  +  +G+ P++ +   VL   S +G
Sbjct: 414 DGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVG 466



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 157/339 (46%), Gaps = 43/339 (12%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC---GSLVYARRLFDKMPDRDLISWNSI 125
           L LG+  H  ++ S    D  +  +L+ MY++C   GS+  AR++FD+MP  +++SW +I
Sbjct: 161 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +  Y  SG  + E +     LF  + +     +  T + +LK C +   +W  E V+   
Sbjct: 221 ITGYVQSGGCDREAI----ELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV 276

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K+ L     V  +L+++YS+ G +  A+  FD + E+++V +  ++ AYA++   EE F
Sbjct: 277 VKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAF 336

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN----------- 293
            LF ++  +G   +  +   +L   S +G   + EQ+ +  +K    +N           
Sbjct: 337 ELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMY 396

Query: 294 -----------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                            + NV+ W   ++G+ + G    A+E F  M+ + V  + VT++
Sbjct: 397 SRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYI 456

Query: 337 VALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
             L+A +       G  +    +  HG   +   Y+ V+
Sbjct: 457 AVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVV 495


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 280/944 (29%), Positives = 450/944 (47%), Gaps = 115/944 (12%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H+++  +  + D F    L ++Y++C SL  AR++FD+ P  ++  WNS L +Y    + 
Sbjct: 24  HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83

Query: 136 NAENVTEGFRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK---IGLV 191
                 E  RLF   +  +       T+   LK C     +   + +HG+A K   IG  
Sbjct: 84  E-----ETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS- 137

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV  ALV +YSK G++ EA  +F+  Q  D VLW  M+  Y +N   EE   LF  +
Sbjct: 138 -DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM 196

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                C D + +  V  +++   K   E++ A    L       +V+ W+  ++ Y    
Sbjct: 197 VMMD-CFDGD-LPLVNSLLNLYAKTGCEKIAA---NLFSKMPEKDVISWSTMIACYANNE 251

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS--AVIV 369
             + A+  F  MI    + +SVT + AL A A + NL  G++IH   +     S  A++ 
Sbjct: 252 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLS 311

Query: 370 GNSLINM-YSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
           G +   M Y  MG        G++ D   +  +L ASS L      +  +H + +++   
Sbjct: 312 GYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI-FQQALCLHGYVVRSGFN 370

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           ++ FV  +LI++Y + GS+ +A  LF+     D+  W++MI  Y +     +ALE+F  M
Sbjct: 371 SNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 430

Query: 484 HTSGERLD---EITIATAVKA----CGCLLMLKQGKQMHAYAMKS--------------- 521
               + +    +I++   V+       C L      ++ A+ M++               
Sbjct: 431 IQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTY 490

Query: 522 ---------------GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
                          G + D  + +    MYV    +  A  +F DIP P    W  MI 
Sbjct: 491 PFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 550

Query: 567 GCVDNGEEDLALSIYHQMRL-------SGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           G   +G    +L +Y +M         SGV+P+  +   ++ A   L AL +G   H+ +
Sbjct: 551 GFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYV 610

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+     D  V  +++DMY+KCG+++ A  LF +   ++ V W+AM+     HG+G + +
Sbjct: 611 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAI 670

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF+ M   GV P  VTF  VLSACS++GL+ E    F LM E++ I  ++ +Y+ +VD 
Sbjct: 671 DLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDL 730

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAG+  EA +LI +MP E  AS+  +LLGACR+  + +  + +A+ L  L+P  +  +
Sbjct: 731 LGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYH 790

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           VLLSNI+AA ++W++V   R  M R+   K                          + ++
Sbjct: 791 VLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLY 850

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--- 893
           AK+E L   +K  GYVP TDFVL D+EEE KE AL YHSE+LA A+GLI+T P + +   
Sbjct: 851 AKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRIT 910

Query: 894 ------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                             + N+  L  +  RFH   DG+C C D
Sbjct: 911 KNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGD 954



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 40/300 (13%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H    K   + D+F +T L  +Y +  S+  A  +F+     ++  WN+ +  Y    
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 472 NSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCV 529
              + L LF  M  T+GE  D  TI  A+KAC  L ML+ GK +H +A K+     D+ V
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S ++++Y KCG M +A  +F +   PD V WT+M++G   N + + AL+++ QM     
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM----- 196

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD--PFVGISLVDMYAKCGNIEDA 647
                                         + +DC     P V  SL+++YAK G  + A
Sbjct: 197 ------------------------------VMMDCFDGDLPLVN-SLLNLYAKTGCEKIA 225

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             LF +M  ++ + W+ M+   A +    E L LF +M     EP+SVT +  L AC+ +
Sbjct: 226 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 285



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 147/674 (21%), Positives = 271/674 (40%), Gaps = 130/674 (19%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           SR  L  L + C +   V     +H    K G++ D F +  L ++Y+K   ++ A+ +F
Sbjct: 3   SRQVLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLF-VDLHRSGLCPDDESVQCVL--------- 267
           D     +V LW   LR+Y      EE   LF + +  +G  PD+ ++   L         
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 268 ---GVISDLGKRHEE----------QVQAY--------AIKLLLYNNNSNVVLWNKKLSG 306
               VI    K+++E           V+ Y        A+K+       + VLW   ++G
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q  D   A+  F  M+  +  +D    LV                             
Sbjct: 180 YQQNNDPEEALALFSQMVMMDC-FDGDLPLV----------------------------- 209

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQF------------TLASVLRASSSLPEGLHLSKQIH 414
               NSL+N+Y+K GC   +  + F            T+ +    + +  E L+L  ++ 
Sbjct: 210 ----NSLLNLYAKTGCE-KIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 264

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
               + ++V  + VS        RN  + E + + +     D+ +W A++ GY  +  ++
Sbjct: 265 EKRFEPNSV--TVVSALQACAVSRN--LEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAY 320

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           K++ +F +M + G + D + +   + A   L + +Q   +H Y ++SGF  ++ V + ++
Sbjct: 321 KSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLI 380

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM--RLSGV--- 589
           ++Y KCG++ DA  +F  +   D V W++MI+    +G    AL I+ QM   + G+   
Sbjct: 381 ELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSC 440

Query: 590 --VPDEFTFAILVKASSCLTALEQGRQIHA------------------------------ 617
             +  +      +  +SC  A     ++ A                              
Sbjct: 441 YQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKS 500

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           N+       D  +      MY     I+ A I+F+ +    + LWN M+ G A  G    
Sbjct: 501 NIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLS 560

Query: 678 TLKLFEDMKAHGVEPDS-------VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           +L+L+  M   G++PD+       V+ + VL AC   G + +  E FH    + G E ++
Sbjct: 561 SLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG-EWFHSYVIQTGFEFDI 619

Query: 731 EHYSFLVDALGRAG 744
              + ++D   + G
Sbjct: 620 LVATAIMDMYSKCG 633



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 19/171 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H+ ++ +    D  +   +M MYS+CGSL  AR LFD+   +DL+ W++++A+Y  
Sbjct: 603 GEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGI 662

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G G      +   LF  + ++    S +T   +L  C  SG +   +      +   L+
Sbjct: 663 HGHGR-----KAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK------MYFQLM 711

Query: 192 WDEFV-------SGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            +EFV          +V++  + G++ EA  L + M  E D  +W  +L A
Sbjct: 712 TEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 762


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/723 (32%), Positives = 386/723 (53%), Gaps = 96/723 (13%)

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           L  ++ +++ W+  +S +        A+  FV+MI +    +   F  A  A +  + ++
Sbjct: 126 LMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS 185

Query: 350 LGQQIHGTTLKSGFY-SAVIVGNSLINMYSK----------------------------- 379
           +G  I G  +K+G+  S V VG  LI+M+ K                             
Sbjct: 186 VGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245

Query: 380 ---MG------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
               G             + G   D+FTL+ V+ A +++ E L L +Q+H  AI++    
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM-ELLLLGQQLHSQAIRHGLTL 304

Query: 425 DSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-SHKALELF 480
           D  V   LI++Y +   +GSM  A  +F+     ++ +W AMI GY+       +AL+LF
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M  +    +  T ++ +KAC  L  L+ G+Q+  +A+K GF    CV++ ++ MY + 
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G + DA+  F+ +   + +++ T+I     N   + AL +++++   G+    FTFA L+
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
             ++ +  + +G QIHA +IK     +  V  +L+ MY++CGNIE A+ +F+ M+ RN +
Sbjct: 485 SGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVI 544

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +++ G A+HG   + L+LF  M   GV P+ VT+I VLSACS+ GLV+E +++F  M
Sbjct: 545 SWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSM 604

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
             ++G+ P +EHY+ +VD LGR+G   EA + I SMP++A A + R  LGACRV G+ E 
Sbjct: 605 YTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLEL 664

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
           GK  A+ ++  EP D +AY+LLSN++A+ ++WD+V++ R  MK KN+ K+          
Sbjct: 665 GKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVEN 724

Query: 832 --------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                         A  I+ +++ L  +IK+ GYVP+ DFVL DVEEE+KE+ L+ HSEK
Sbjct: 725 KVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEK 784

Query: 878 LARAYGLIST---PPSSV------------------ILSNKEPLY--ANRFHHLRDGMCP 914
           +A A+GLIST    P  V                  + + +E +   ANRFHH++DG C 
Sbjct: 785 IAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCS 844

Query: 915 CAD 917
           C +
Sbjct: 845 CNE 847



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 144/602 (23%), Positives = 263/602 (43%), Gaps = 93/602 (15%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDRD 118
           L+  I T    +G   H ++  S    D    N+L+++YS+CG    A  +F  M   RD
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRD 132

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFR---LFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           LISW+++++ +A        N   GFR    F  + E+  + +    A   + C ++ +V
Sbjct: 133 LISWSAMVSCFA--------NNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFV 184

Query: 176 WASETVHGYALKIGLVWDEFVSG-ALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLR 233
              +++ G+ +K G +  +   G  L++++ K  G +  A  +F+ M ER+ V W +M+ 
Sbjct: 185 SVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMIT 244

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKL 288
              + G+  E   LF+++  SG  PD  ++  V+   ++     LG++   Q   + + L
Sbjct: 245 RLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTL 304

Query: 289 ------LLYNN---------------------NSNVVLWNKKLSGYLQVGD-NHGAIECF 320
                  L N                      + NV  W   ++GY+Q G  +  A++ F
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             MI ++V  +  TF   L A A    L +G+Q+    +K GF S   V NSLI+MY++ 
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424

Query: 381 GCV-------------------------------------------CGLRTDQFTLASVL 397
           G +                                            G+    FT AS+L
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
             ++S+   +   +QIH   IK+    +  V  ALI +Y R G++  A  +FE+ +  ++
Sbjct: 485 SGAASIGT-IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHA 516
            +W ++I G+     + +ALELF  M   G R + +T    + AC  + ++ +G K   +
Sbjct: 544 ISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKS 603

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
              + G    +   + ++D+  + G++ +A    N +P   D + W T +  C  +G  +
Sbjct: 604 MYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLE 663

Query: 576 LA 577
           L 
Sbjct: 664 LG 665



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 7/300 (2%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE-NKDGFDLATWNAMIFGYILSN 471
           +H    ++D   DS    +LI +Y + G   +A  +F+      DL +W+AM+  +  +N
Sbjct: 88  VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNN 147

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVS 530
              +AL  F  M  +G   +E   A A +AC     +  G  +  + +K+G+ + D+CV 
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVG 207

Query: 531 SGILDMYVKC-GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            G++DM+VK  G +V A  +F  +P  + V WT MI+  +  G    A+ ++ +M LSG 
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY 267

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC---GNIED 646
            PD FT + ++ A + +  L  G+Q+H+  I+   + D  VG  L++MYAKC   G++  
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGN-GEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           A  +F Q+   N   W AM+ G  Q G   EE L LF  M    V P+  TF   L AC+
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 3/235 (1%)

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           HKA+    HM   G   D  T +  +K C        G  +H    +S  +LD    + +
Sbjct: 48  HKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL 107

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           + +Y KCG    A SIF  + +  D ++W+ M+S   +N     AL  +  M  +G  P+
Sbjct: 108 ISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKC-GNIEDAYIL 650
           E+ FA   +A S    +  G  I   ++K     SD  VG  L+DM+ K  G++  A+ +
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKV 227

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           F++M  RN V W  M+  L Q G   E + LF +M   G EPD  T  GV+SAC+
Sbjct: 228 FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 16/250 (6%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKS--THARILNSSQIPDR 88
           L  F   +L  +  +HF+ SS+       L+   + + L +G+   THA  L  S +   
Sbjct: 361 LDLFRGMILTHVIPNHFTFSST-------LKACANLAALRIGEQVFTHAVKLGFSSV--N 411

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            + N+L++MY+R G +  AR+ FD + +++LIS+N+++ AYA +      N  E   LF 
Sbjct: 412 CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKN-----LNSEEALELFN 466

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            + +     S  T A LL    S G +   E +H   +K GL  ++ V  AL+++YS+ G
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCG 526

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            I  A  +F+ M++R+V+ W  ++  +A++GF  +   LF  +   G+ P+  +   VL 
Sbjct: 527 NIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLS 586

Query: 269 VISDLGKRHE 278
             S +G  +E
Sbjct: 587 ACSHVGLVNE 596



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 1/144 (0%)

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           ++NG    A+S    M   G  PD  T+++ +K      + + G  +H  L + D   D 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
               SL+ +Y+KCG  E A  +F+ M   R+ + W+AM+   A +  G   L  F DM  
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 688 HGVEPDSVTFIGVLSACSYTGLVS 711
           +G  P+   F     ACS    VS
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVS 185


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/646 (35%), Positives = 339/646 (52%), Gaps = 80/646 (12%)

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNS--------LINMYSKMGCVCGLRTDQFTLASVLRA 399
           L+  QQ+H    ++ F  A  V  S         +N Y+ M  +  +  D F + SVL+A
Sbjct: 60  LDQTQQLHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKL-DIEVDSFIIPSVLKA 118

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD--- 456
            S +     + K+IH  ++KN  V+D FV  AL+ +Y   GS+  A  LF+     D   
Sbjct: 119 CSQISVA-RMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVS 177

Query: 457 -------------------LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
                              + +W AMI GYI  N+  +   LF  M       ++IT+ +
Sbjct: 178 WSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            + +CG +  ++ GK++HAY +++GF + L +++ ++DMY KCG +  A++IF+ +   D
Sbjct: 238 LIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKD 297

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            + WT MIS        D A  ++ QMR +GV P+E T   L+   +   AL+ G+  HA
Sbjct: 298 VMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHA 357

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            + K     D  +  +L+DMYAKCG+I  A  LF +   R+   WN M+ G   HG GE+
Sbjct: 358 YIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEK 417

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            LKLF +M+  GV+P+ +TFIG L ACS+ GLV E    F  M   +G+ P+VEHY  +V
Sbjct: 418 ALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMV 477

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGRAG   EA ++I SMP   + ++  A+L AC++  ++  G+  A +L+ALEP +  
Sbjct: 478 DLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCG 537

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLI-------------- 843
             VL+SNI+AAAN+W+DV   R  +K   +KK+P  +   +V GL+              
Sbjct: 538 YKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG-MSSIEVNGLVHDFKMGDTAHPLIE 596

Query: 844 ----------KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
                     K++KE GY+PDT  VL +++EEEKE AL YHSEKLA A+GLIST P + I
Sbjct: 597 KISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPI 656

Query: 894 LSNKE---------------PLYA--------NRFHHLRDGMCPCA 916
              K                 +Y         NRFHH R+G C C 
Sbjct: 657 RVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCG 702



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 209/477 (43%), Gaps = 84/477 (17%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSS--SSSQWFSI 59
           +T+   N  P+H++ +    SFT + +  L   +  L   + ++HF+ +   S S + S 
Sbjct: 31  FTKTPQNPSPQHQNKHQKHPSFTPNNHLCLDQ-TQQLHAHITRTHFNHAQQVSFSPFESH 89

Query: 60  LRHAISTSDLL--------------------------LGKSTHARILNSSQIPDRFLTNN 93
            R+A++T   +                          +GK  H   + +  + D F+ N 
Sbjct: 90  PRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNA 149

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH-----------------SGEGN 136
           LM MYS CGSLV AR LFDKM +RD++SW++++ AY                   +G   
Sbjct: 150 LMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIR 209

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
             ++ EG RLF  + E   F + +T+  L+  C   G V   + +H Y L+ G      +
Sbjct: 210 CNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLAL 269

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + ALV++Y K G+IR A+ +FD M+ +DV+ W  M+ AYA+    +  F LFV +  +G+
Sbjct: 270 ATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV 329

Query: 257 CPDDESVQCVLGVIS-----DLGKRHEEQV--QAYAIKLLLYNN---------------- 293
            P++ ++  +L + +     D+GK     +  Q   + ++L                   
Sbjct: 330 RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389

Query: 294 ------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                 + ++  WN  ++GY   G    A++ F  M    V+ + +TF+ AL A +    
Sbjct: 390 LFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACS---- 445

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
            + G  + G     G +  +I    L+      GC+  L      L    +   S+P
Sbjct: 446 -HAGLVVEG----KGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMP 497


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 257/834 (30%), Positives = 407/834 (48%), Gaps = 140/834 (16%)

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EE 279
           Q R    W  +LR+   +    E    +VD+   G+ PD+ +   +L  ++DL      +
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 280 QVQAYAIK--------------LLLYN---------------NNSNVVLWNKKLSGYLQV 310
           Q+ A+  K              + LY                +  N V WN  +S     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG---TDNLNLGQQIHGTTLKSGFYSAV 367
                A+E F  M+  NV+  S T +  + A +     + L +G+Q+H   L+ G  ++ 
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237

Query: 368 IVGNSLINMYSKMG-------------------------CVC------------------ 384
           I+ N+L+ MY K+G                          +C                  
Sbjct: 238 II-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
           G+  D+FT++SVL A S L E L   K++H +A+KN ++  +SFV +AL+D+YC    + 
Sbjct: 297 GVEPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKAC 502
               +F+      +  WNAMI GY  + +  +AL LF  M  S   L +  T+A  V AC
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
                  + + +H + +K G + D  V + ++DMY + G +  A  IF  +   D V W 
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475

Query: 563 TMISGCVDNGEEDLALSIYHQM------------RLSGVVPDEFTFAILVKASSCLTALE 610
           TMI+G V +   + AL + H+M            R+S + P+  T   ++ + + L+AL 
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALA 534

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +G++IHA  IK + ++D  VG +LVDMYAKCG ++ +  +F Q+  +N + WN +++   
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HGNG+E + L   M   GV+P+ VTFI V +ACS++G+V E    F++M+  YG+EP  
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFE-ASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +HY+ +VD LGRAGR KEA +L+  MP +   A    +LLGA R+  + E G+  A+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
            LEP  +S YVLL+NI+++A  WD  T  R  MK + V+K+P                  
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                ++ +   +E L +R+++ GYVPDT  VL +VEE+EKE  L  HSEKLA A+G+++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834

Query: 887 TPPSSVILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
           T P ++I   K     N                       RFH  ++G C C D
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGD 888



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 154/351 (43%), Gaps = 58/351 (16%)

Query: 69  LLLGKSTHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L  GK  HA  L N S   + F+ + L+ MY  C  ++  RR+FD M DR +  WN+++A
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            Y+ +     E+  E   LF  + ES     +  T+A ++  C+ SG     E +HG+ +
Sbjct: 378 GYSQN-----EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K GL  D FV   L+++YS+ GKI  A  +F  M++RD+V W  M+  Y  +   E+   
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492

Query: 247 LFVDLH-----------RSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYN 292
           L   +            R  L P+  ++  +L     +S L K  E  + AYAIK  L  
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE--IHAYAIKNNLAT 550

Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           +                              NV+ WN  +  Y   G+   AI+    M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKSGFYSAVI 368
              V+ + VTF+   AA + +  ++ G +I       +G    S  Y+ V+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 187/442 (42%), Gaps = 85/442 (19%)

Query: 12  RHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWF----------SILR 61
           RHKH Y++ ++ T  T  ++ S ++S  P    S F S S S +W+          ++LR
Sbjct: 26  RHKHPYLLRATPTSAT-EDVAS-AVSGAP----SIFISQSRSPEWWIDLLRSKVRSNLLR 79

Query: 62  HAIST--------------------------SDLLLGKSTHARILNSSQIPDRF-LTNNL 94
            A+ T                           D+ LGK  HA +       D   + N L
Sbjct: 80  EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + +Y +CG      ++FD++ +R+ +SWNS++++       + E        FR + +  
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC-----SFEKWEMALEAFRCMLDEN 194

Query: 155 TFTSRLTLAPLLKLC----LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
              S  TL  ++  C    +  G +   + VH Y L+ G + + F+   LV +Y K GK+
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQ-VHAYGLRKGEL-NSFIINTLVAMYGKLGKL 252

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
             +K L      RD+V W  +L +  +N    E      ++   G+ PD+ ++  VL   
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312

Query: 271 SDLGK-RHEEQVQAYAIK--------------LLLYNNNSNVV---------------LW 300
           S L   R  +++ AYA+K              + +Y N   V+               LW
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           N  ++GY Q   +  A+  F+ M  S  +  +S T    + A   +   +  + IHG  +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432

Query: 360 KSGFYSAVIVGNSLINMYSKMG 381
           K G      V N+L++MYS++G
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLG 454



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 9/182 (4%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           S  S   +S    +IL    + S L  GK  HA  + ++   D  + + L+ MY++CG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
             +R++FD++P +++I+WN I+ AY   G G      E   L R +       + +T   
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ-----EAIDLLRMMMVQGVKPNEVTFIS 623

Query: 165 LLKLCLSSGYVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           +   C  SG V     +  Y +K   G+         +V++  + G+I+EA  L + M  
Sbjct: 624 VFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMP 681

Query: 223 RD 224
           RD
Sbjct: 682 RD 683


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 257/834 (30%), Positives = 407/834 (48%), Gaps = 140/834 (16%)

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EE 279
           Q R    W  +LR+   +    E    +VD+   G+ PD+ +   +L  ++DL      +
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 280 QVQAYAIK--------------LLLYN---------------NNSNVVLWNKKLSGYLQV 310
           Q+ A+  K              + LY                +  N V WN  +S     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG---TDNLNLGQQIHGTTLKSGFYSAV 367
                A+E F  M+  NV+  S T +  + A +     + L +G+Q+H   L+ G  ++ 
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237

Query: 368 IVGNSLINMYSKMG-------------------------CVC------------------ 384
           I+ N+L+ MY K+G                          +C                  
Sbjct: 238 II-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
           G+  D+FT++SVL A S L E L   K++H +A+KN ++  +SFV +AL+D+YC    + 
Sbjct: 297 GVEPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKAC 502
               +F+      +  WNAMI GY  + +  +AL LF  M  S   L +  T+A  V AC
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
                  + + +H + +K G + D  V + ++DMY + G +  A  IF  +   D V W 
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475

Query: 563 TMISGCVDNGEEDLALSIYHQM------------RLSGVVPDEFTFAILVKASSCLTALE 610
           TMI+G V +   + AL + H+M            R+S + P+  T   ++ + + L+AL 
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALA 534

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +G++IHA  IK + ++D  VG +LVDMYAKCG ++ +  +F Q+  +N + WN +++   
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HGNG+E + L   M   GV+P+ VTFI V +ACS++G+V E    F++M+  YG+EP  
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFE-ASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +HY+ +VD LGRAGR KEA +L+  MP +   A    +LLGA R+  + E G+  A+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
            LEP  +S YVLL+NI+++A  WD  T  R  MK + V+K+P                  
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                ++ +   +E L +R+++ GYVPDT  VL +VEE+EKE  L  HSEKLA A+G+++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834

Query: 887 TPPSSVILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
           T P ++I   K     N                       RFH  ++G C C D
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGD 888



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 154/351 (43%), Gaps = 58/351 (16%)

Query: 69  LLLGKSTHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L  GK  HA  L N S   + F+ + L+ MY  C  ++  RR+FD M DR +  WN+++A
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            Y+ +     E+  E   LF  + ES     +  T+A ++  C+ SG     E +HG+ +
Sbjct: 378 GYSQN-----EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K GL  D FV   L+++YS+ GKI  A  +F  M++RD+V W  M+  Y  +   E+   
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492

Query: 247 LFVDLH-----------RSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYN 292
           L   +            R  L P+  ++  +L     +S L K  E  + AYAIK  L  
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE--IHAYAIKNNLAT 550

Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           +                              NV+ WN  +  Y   G+   AI+    M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKSGFYSAVI 368
              V+ + VTF+   AA + +  ++ G +I       +G    S  Y+ V+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 191/451 (42%), Gaps = 87/451 (19%)

Query: 5   LQANLKP--RHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWF----- 57
           L + L P  RHKH Y++ ++ T  T  ++ S ++S  P    S F S S S +W+     
Sbjct: 17  LPSQLLPFSRHKHPYLLRATPTSAT-EDVAS-AVSGAP----SIFISQSRSPEWWIDLLR 70

Query: 58  -----SILRHAIST--------------------------SDLLLGKSTHARILNSSQIP 86
                ++LR A+ T                           D+ LGK  HA +       
Sbjct: 71  SKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGV 130

Query: 87  DRF-LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           D   + N L+ +Y +CG      ++FD++ +R+ +SWNS++++       + E       
Sbjct: 131 DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC-----SFEKWEMALE 185

Query: 146 LFRSLRESITFTSRLTLAPLLKLC----LSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
            FR + +     S  TL  ++  C    +  G +   + VH Y L+ G + + F+   LV
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ-VHAYGLRKGEL-NSFIINTLV 243

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
            +Y K GK+  +K L      RD+V W  +L +  +N    E      ++   G+ PD+ 
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 262 SVQCVLGVISDLGK-RHEEQVQAYAIK--------------LLLYNNNSNVV-------- 298
           ++  VL   S L   R  +++ AYA+K              + +Y N   V+        
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 299 -------LWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNL 350
                  LWN  ++GY Q   +  A+  F+ M  S  +  +S T    + A   +   + 
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            + IHG  +K G      V N+L++MYS++G
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 9/182 (4%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           S  S   +S    +IL    + S L  GK  HA  + ++   D  + + L+ MY++CG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
             +R++FD++P +++I+WN I+ AY   G G      E   L R +       + +T   
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ-----EAIDLLRMMMVQGVKPNEVTFIS 623

Query: 165 LLKLCLSSGYVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           +   C  SG V     +  Y +K   G+         +V++  + G+I+EA  L + M  
Sbjct: 624 VFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMP 681

Query: 223 RD 224
           RD
Sbjct: 682 RD 683


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/778 (31%), Positives = 378/778 (48%), Gaps = 99/778 (12%)

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H  A+  G + D F++  L+  YSK G++R+A+ LFD M  +++V W   +  +A++G  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 242 EEVFHLFVDLHRS--GLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNN---- 294
           E+   LF    R+  G  P++  +   L            +QV   A+++ L  N     
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 295 ------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                                    N V W   ++GY Q+G    A+E F  M    V+ 
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK----------- 379
           D      A++A +    L  G+Q HG   +    +   V N+LI++Y K           
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 380 ------------------MGCVC--------------GLRTDQFTLASVLRASSSLPEGL 407
                             M   C              G + D F  AS+L +  SL   +
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLA-AI 332

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
              +Q+H HAIK +  +D +V  +LID+Y +   + EA  +FE     D  ++NAMI GY
Sbjct: 333 WQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGY 392

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
               +   A+++FS M     +   +T  + +        ++  KQ+H   +KSG  LDL
Sbjct: 393 SRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDL 452

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
              S ++D+Y K   + DA+++FN +   D V W  MI G   N + + A+ +++Q+++S
Sbjct: 453 YAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVS 512

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+ P+EFTF  LV  +S L ++  G+Q HA +IK    SD  V  +L+DMYAKCG I++ 
Sbjct: 513 GLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEG 572

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
            +LF+    ++ + WN+M+   AQHG  EE L +F  M   GVEP+ VTF+GVLSAC++ 
Sbjct: 573 RLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHA 632

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV E   +F  M+ KY IEP  EHY+ +V+  GR+G+   A E I  MP E +A++ R+
Sbjct: 633 GLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRS 692

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL AC + G+ E G++  E  +  +P DS   VL+SNI+A+   W D    R  M    V
Sbjct: 693 LLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGV 752

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDT-DFVLLD 861
            K+P                       AD+I++ ++ L   +K GGY+PDT +  LLD
Sbjct: 753 VKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDTSELTLLD 810



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 181/677 (26%), Positives = 305/677 (45%), Gaps = 80/677 (11%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            HAR + +  +PD FL N L+  YS+ G +  ARRLFD+MP ++L+SW S ++   H+  
Sbjct: 33  AHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAIS--MHAQH 90

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
           G  E+    F  F+         +   LA  L+ C  S  V   + VHG A++IGL  + 
Sbjct: 91  GCEEDAVALFAAFQRASGG-EAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNV 149

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           +V  AL+N+Y+K G I  A  +FD +  ++ V W  ++  Y++ G G     LF  +   
Sbjct: 150 YVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLD 209

Query: 255 GLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN-------------------- 293
           G+ PD   +   +   S LG      Q   YA ++ +  +                    
Sbjct: 210 GVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLA 269

Query: 294 --------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
                   N N+V W   ++GY+Q   +  A+  F  + +   Q D       L +    
Sbjct: 270 RKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSL 329

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------------- 379
             +  G+Q+H   +K+   S   V NSLI+MY+K                          
Sbjct: 330 AAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 389

Query: 380 ---------MGCV--------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
                     G +        C L+    T  S+L  SSS    + LSKQIH   +K+ T
Sbjct: 390 EGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSS-QSAIELSKQIHGLIVKSGT 448

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             D +  ++LIDVY +   + +A+ +F      D+  WNAMIFG   +    +A++LF+ 
Sbjct: 449 SLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQ 508

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           +  SG   +E T    V     L+ +  G+Q HA  +K+G + D  VS+ ++DMY KCG 
Sbjct: 509 LQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGF 568

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + + + +F      D + W +MIS    +G+ + AL ++  M  +GV P+  TF  ++ A
Sbjct: 569 IKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSA 628

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NT 659
            +    +++G + H + +K   + +P      S+V+++ + G +  A    ++M +    
Sbjct: 629 CAHAGLVDEGLR-HFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAA 687

Query: 660 VLWNAMLVGLAQHGNGE 676
            +W ++L      GN E
Sbjct: 688 AVWRSLLSACHLFGNVE 704



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/631 (23%), Positives = 267/631 (42%), Gaps = 82/631 (12%)

Query: 13  HKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLG 72
           HK+     S+ +          +++L    Q++    + +     S LR    +  +  G
Sbjct: 74  HKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFG 133

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  H   +      + ++   L+ +Y++ G +  A  +FD +P ++ ++W +++  Y+  
Sbjct: 134 QQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQI 193

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+G          LF  +        R  LA  +  C + G++      HGYA +I +  
Sbjct: 194 GQGGV-----ALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVET 248

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  V  AL+++Y K  ++  A+ LFD M+ R++V W  M+  Y +N    E   +F  L 
Sbjct: 249 DASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLS 308

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLL----YNNNS------------ 295
           + G  PD  +   +L     L    +  QV A+AIK  L    Y  NS            
Sbjct: 309 QEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLT 368

Query: 296 ------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       + + +N  + GY ++GD  GAI+ F  M   +++   +TF+  L   +
Sbjct: 369 EARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSS 428

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC--------------------- 382
               + L +QIHG  +KSG    +  G+SLI++YSK                        
Sbjct: 429 SQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNA 488

Query: 383 ----------------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                 V GL  ++FT  +++  +S+L    H  +Q H   IK 
Sbjct: 489 MIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFH-GQQFHAQIIKA 547

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
              +D  VS ALID+Y + G + E   LFE+  G D+  WN+MI  Y     + +AL +F
Sbjct: 548 GADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVF 607

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYV 538
             M  +G   + +T    + AC    ++ +G + H   MK+ + ++      + +++++ 
Sbjct: 608 RMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLR-HFDFMKTKYAIEPGTEHYASVVNLFG 666

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           + G +  A+     +P  P    W +++S C
Sbjct: 667 RSGKLHAAKEFIERMPIEPAAAVWRSLLSAC 697



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 198/436 (45%), Gaps = 48/436 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    S + +  G+  HA  + ++   D ++ N+L+ MY++C  L  AR +F+ + + 
Sbjct: 321 SILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAED 380

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D IS+N+++  Y+  G+     +     +F  +R      S LT   LL +  S   +  
Sbjct: 381 DAISYNAMIEGYSRLGD-----LAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIEL 435

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           S+ +HG  +K G   D +   +L+++YSKF  + +AK +F+ M  RD+V+W  M+   A+
Sbjct: 436 SKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQ 495

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKL-------- 288
           N  GEE   LF  L  SGL P++ +   ++ V S L    H +Q  A  IK         
Sbjct: 496 NEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHV 555

Query: 289 ------------------LLYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                             LL+ +    +V+ WN  +S Y Q G    A+  F  M  + V
Sbjct: 556 SNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGV 615

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN----SLINMYSKMGCVC 384
           + + VTF+  L+A A    ++ G + H   +K+ +  A+  G     S++N++ + G + 
Sbjct: 616 EPNYVTFVGVLSACAHAGLVDEGLR-HFDFMKTKY--AIEPGTEHYASVVNLFGRSGKLH 672

Query: 385 GLR--TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-----ADSFVSTALIDVYC 437
             +   ++  +        SL    HL   + +     +       ADS  S  + ++Y 
Sbjct: 673 AAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYA 732

Query: 438 RNGSMAEAEYLFENKD 453
             G  ++A+ L +  D
Sbjct: 733 SRGLWSDAQKLRQGMD 748


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 249/883 (28%), Positives = 429/883 (48%), Gaps = 94/883 (10%)

Query: 90   LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
            + N L+ +YSRCG +  A ++FD M  RD ISWNS ++ Y  +G  +         LF  
Sbjct: 235  VANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHD-----RAVDLFSK 289

Query: 150  LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD---------EFVSGAL 200
            +    T  S +T+  +L  C   G+    + VHGY++K GL+WD         E +   L
Sbjct: 290  MWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKL 349

Query: 201  VNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
            V +Y K G +  A+ +FD M  + +V +W +++  YA+    EE   LF  +H  G+ PD
Sbjct: 350  VFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPD 409

Query: 260  DESVQCVLGVISDLGKRHEEQV-QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
            + ++ C+L  I+ L    +  V   Y +KL      +   + N  +S Y +         
Sbjct: 410  EHALSCLLKCITCLSCARDGLVAHGYLVKLGF---GTQCAVCNALISFYAKS-------- 458

Query: 319  CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
               NMI + V        +    +   D ++    I G T  +G  S  I     + M+ 
Sbjct: 459  ---NMIDNAV--------LVFDRMPHQDTISWNSVISGCT-SNGLNSEAI--ELFVRMWM 504

Query: 379  KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
            +     G   D  TL SVL A +       + + +H +++K   + ++ ++ AL+D+Y  
Sbjct: 505  Q-----GHELDSTTLLSVLPACAR-SHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSN 558

Query: 439  NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
                     +F N    ++ +W AMI  Y  +    K   L   M   G + D   + + 
Sbjct: 559  CSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSV 618

Query: 499  VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
            +        LKQGK +H YA+++G E  L V++ +++MYV C  M +A+ +F+ +   D 
Sbjct: 619  LHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDI 678

Query: 559  VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            ++W T+I G   N   + + S++  M L    P+  T   ++ A + +++LE+GR+IHA 
Sbjct: 679  ISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAY 737

Query: 619  LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
             ++     D +   +LVDMY KCG +  A +LF ++  +N + W  M+ G   HG G++ 
Sbjct: 738  ALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDA 797

Query: 679  LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
            + LFE M+  GVEPD+ +F  +L AC ++GL +E ++ F+ MR++Y IEP+++HY+ +VD
Sbjct: 798  VALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVD 857

Query: 739  ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
             L   G  KEA E I SMP E  +S+  +LL  CR+  D +  + VA+++  LEP ++  
Sbjct: 858  LLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGY 917

Query: 799  YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLI 835
            YVLL+NI+A A +W+ V   + ++  + ++++                         + I
Sbjct: 918  YVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRI 977

Query: 836  FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-- 893
               ++ + +R++E G+ P   + L+   +   + AL  HS KLA  +G++  P    I  
Sbjct: 978  AEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRV 1037

Query: 894  -------------------LSNKEPLY--ANRFHHLRDGMCPC 915
                               + N+E +   ++RFHH   G C C
Sbjct: 1038 TKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 183/356 (51%), Gaps = 17/356 (4%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++++ +M C CG+  D   ++ VL+  +SL   +   + IH    K        V+ ALI
Sbjct: 183 VSLFRQMQC-CGVSPDAHAVSCVLKCIASLGS-ITEGEVIHGLLEKLGLGEACAVANALI 240

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y R G M +A  +F++    D  +WN+ I GY  +    +A++LFS M + G  +  +
Sbjct: 241 ALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSV 300

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL-CVSSGILD--------MYVKCGAMV 544
           T+ + + AC  L     GK +H Y+MKSG   DL  V SGI +        MYVKCG M 
Sbjct: 301 TVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMG 360

Query: 545 DAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            A+ +F+ +P+  +V  W  ++ G     E + +L ++ QM   G+ PDE   + L+K  
Sbjct: 361 SARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCI 420

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           +CL+    G   H  L+KL   +   V  +L+  YAK   I++A ++F +M  ++T+ WN
Sbjct: 421 TCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWN 480

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS-----YTGLVSEAY 714
           +++ G   +G   E ++LF  M   G E DS T + VL AC+     + G V   Y
Sbjct: 481 SVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGY 536



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 225/561 (40%), Gaps = 90/561 (16%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFR 145
           D  L + L+ MY +CG +  ARR+FD MP + ++  WN I+  YA + E       E   
Sbjct: 342 DEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAE-----FEESLL 396

Query: 146 LFRSLRESITFTSRLTLAPLLKL--CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           LF  + E         L+ LLK   CLS          HGY +K+G      V  AL++ 
Sbjct: 397 LFEQMHELGITPDEHALSCLLKCITCLSCAR--DGLVAHGYLVKLGFGTQCAVCNALISF 454

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y+K   I  A  +FD M  +D + W  ++     NG   E   LFV +   G   D  + 
Sbjct: 455 YAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTT- 513

Query: 264 QCVLGVISDLGKRH----EEQVQAYAIK-------------LLLYNNNS----------- 295
             +L V+    + H       V  Y++K             L +Y+N S           
Sbjct: 514 --LLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRN 571

Query: 296 ----NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               NVV W   ++ Y + G           M+   ++ D       L   AG ++L  G
Sbjct: 572 MAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQG 631

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMY----------------------SKMGCVCGLRTD 389
           + +HG  +++G    + V N+L+ MY                      S    + G   +
Sbjct: 632 KSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRN 691

Query: 390 QF--------------------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
            F                    T+  +L A +S+   L   ++IH +A++   + DS+ S
Sbjct: 692 NFANESFSLFSDMLLQFKPNTVTMTCILPAVASI-SSLERGREIHAYALRRGFLEDSYTS 750

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            AL+D+Y + G++  A  LF+     +L +W  MI GY +      A+ LF  M  SG  
Sbjct: 751 NALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVE 810

Query: 490 LDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            D  + +  + AC    +  +G K  +A   +   E  L   + I+D+    G + +A  
Sbjct: 811 PDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFE 870

Query: 549 IFNDIP-APDDVAWTTMISGC 568
               +P  PD   W +++ GC
Sbjct: 871 FIESMPIEPDSSIWVSLLHGC 891



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 139/309 (44%), Gaps = 17/309 (5%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDG--FDLATWNAMIFGYILSNNSHKALELF 480
           +  S +   L+  Y + G +  A  +F+       D+  W +++  Y  + +  + + LF
Sbjct: 127 IIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLF 186

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M   G   D   ++  +K    L  + +G+ +H    K G      V++ ++ +Y +C
Sbjct: 187 RQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRC 246

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G M DA  +F+ + A D ++W + ISG   NG  D A+ ++ +M   G      T   ++
Sbjct: 247 GCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVL 306

Query: 601 KASSCLTALEQGRQIHA---------NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
            A + L     G+ +H          +L  +    D  +G  LV MY KCG++  A  +F
Sbjct: 307 PACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVF 366

Query: 652 KQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS-----ACS 705
             M  +  V +WN ++ G A+    EE+L LFE M   G+ PD      +L      +C+
Sbjct: 367 DAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCA 426

Query: 706 YTGLVSEAY 714
             GLV+  Y
Sbjct: 427 RDGLVAHGY 435



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 17/287 (5%)

Query: 499 VKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP--A 555
           V+ CG    L+  ++ HA     +G  +   +   ++  Y+KCG +  A+ +F+++P   
Sbjct: 101 VQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRV 160

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D   WT+++S     G+    +S++ QM+  GV PD    + ++K  + L ++ +G  I
Sbjct: 161 ADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVI 220

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  L KL       V  +L+ +Y++CG +EDA  +F  M  R+ + WN+ + G   +G  
Sbjct: 221 HGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWH 280

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG--LVSEAYENFHLMREKYGIEPEVEHY 733
           +  + LF  M + G E  SVT + VL AC+  G  LV +    + +   K G+  ++E  
Sbjct: 281 DRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSM---KSGLLWDLESV 337

Query: 734 SFLVD-ALG--------RAGRTKEAGELILSMPFEASASMHRALLGA 771
              +D ALG        + G    A  +  +MP + +  +   ++G 
Sbjct: 338 QSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGG 384



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L  GKS H   + +       + N LM MY  C ++  AR +FD + ++
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ISWN+++  Y+ +   N     E F LF  +       + +T+  +L    S   +  
Sbjct: 677 DIISWNTLIGGYSRNNFAN-----ESFSLFSDMLLQFK-PNTVTMTCILPAVASISSLER 730

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H YAL+ G + D + S ALV++Y K G +  A+ LFD + +++++ W +M+  Y  
Sbjct: 731 GREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGM 790

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           +G G++   LF  +  SG+ PD  S   +L
Sbjct: 791 HGCGKDAVALFEQMRGSGVEPDTASFSAIL 820


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/836 (28%), Positives = 401/836 (47%), Gaps = 116/836 (13%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +L S      F    L+ MY++CG +  ARR+FD +   D I W S++A Y  
Sbjct: 176 GRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHR 235

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G                 ++++   SR+                          K+G V
Sbjct: 236 VGR---------------YQQALALFSRME-------------------------KMGSV 255

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D+     +++  +  G++ +A+ L   ++    V W  ++ +Y+++G   EVF L+ D+
Sbjct: 256 PDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDM 315

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK----------------------- 287
            + GL P   +   +L   +++    E  Q+ A A+K                       
Sbjct: 316 KKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCI 375

Query: 288 -----LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                +  ++   N+V+WN  L G++Q       I+ F  M R++++ D  TF+  L A 
Sbjct: 376 SDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGAC 435

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
               +L+LG+Q+H  T+K+G  + + V N++++MYSK+G +                   
Sbjct: 436 INLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWN 495

Query: 384 ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G+  D+ + A+ + A S++   +   KQIH  +IK
Sbjct: 496 ALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNI-WAIETGKQIHSASIK 554

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
            +  ++  V ++LID+Y + G +  +  +  + D   +   NA+I G + +N   +A+EL
Sbjct: 555 YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIEL 614

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYV 538
           F  +   G +    T  + +  C   +    GKQ+H Y +KS     D  +   ++ +Y+
Sbjct: 615 FQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYL 674

Query: 539 KCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           KC  + DA  +  ++P   + V WT  ISG   NG    +L ++ +MR   V  DE TF 
Sbjct: 675 KCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFT 734

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++KA S + AL  G++IH  ++K    S      +L+DMY+KCG++  ++ +FK++  R
Sbjct: 735 SVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNR 794

Query: 658 NTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
             ++ WN+M+VG A++G   E L LF+ M+   ++PD VT +GVL ACS+ GL+SE    
Sbjct: 795 QNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHF 854

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F  M + YGI P V+HY+ L+D LGR G  ++A E+I  +PF A   +    L AC++  
Sbjct: 855 FDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHK 914

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           D E GK  A+KL+ +EP  SS YV LS++ AAA  W +   AR  M+ K V K P 
Sbjct: 915 DEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPG 970



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 199/715 (27%), Positives = 328/715 (45%), Gaps = 57/715 (7%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HARIL         L + L+ +Y R G + YA R           S  +      H+  G
Sbjct: 76  HARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARSG 135

Query: 136 NAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
           +  +V + F+    +R SI  T  +  +A +L  C   G +     VH   LK G     
Sbjct: 136 SPRDVLDAFQ---RIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSV 192

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F    LV++Y+K G++ +A+ +FDG+   D + W  M+  Y   G  ++   LF  + + 
Sbjct: 193 FCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKM 252

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
           G  PD  +   ++  ++ +G+  + +     I++      ++ V WN  ++ Y Q G + 
Sbjct: 253 GSVPDQVTCVTIISTLASMGRLGDARTLLKRIRM------TSTVAWNAVIASYSQSGLDS 306

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
                + +M +  +     TF   L+A A     + G+QIH T +K G  + V VG+SLI
Sbjct: 307 EVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLI 366

Query: 375 NMYSKMGCV-------------------------------------------CGLRTDQF 391
           N+Y K GC+                                             L  D F
Sbjct: 367 NLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDF 426

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T  SVL A  +L   L L +Q+H   IKN   AD FV+ A++D+Y + G++  A+ LF  
Sbjct: 427 TFVSVLGACINL-YSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSL 485

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  +WNA+I G   +    +A+ +   M   G  LDE++ ATA+ AC  +  ++ G
Sbjct: 486 IPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETG 545

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           KQ+H+ ++K     +  V S ++D+Y K G +  ++ +   + A   V    +I+G V N
Sbjct: 546 KQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQN 605

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC-SSDPFV 630
             ED A+ ++ Q+   G  P  FTF  ++   +   +   G+Q+H   +K    + D  +
Sbjct: 606 NREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSL 665

Query: 631 GISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           GISLV +Y KC  +EDA  L +++ D +N V W A + G AQ+G   ++L +F  M+++ 
Sbjct: 666 GISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYD 725

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           V  D  TF  VL ACS    +++  E  H +  K G        S L+D   + G
Sbjct: 726 VRSDEATFTSVLKACSEMAALTDGKE-IHGLIVKSGFVSYETATSALMDMYSKCG 779



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 283/574 (49%), Gaps = 51/574 (8%)

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR---EAKFLFDGMQERDVVLWKVMLR 233
           A   +H   L++GL     +  ALV++Y + G++     A     G          V L 
Sbjct: 71  ACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSV-LS 129

Query: 234 AYAENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK---- 287
            +A +G   +V   F  +  S G  PD   +  VL   S LG   H  QV    +K    
Sbjct: 130 CHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFC 189

Query: 288 ---------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNM 323
                    + +Y     V               + W   ++GY +VG    A+  F  M
Sbjct: 190 SSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRM 249

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC- 382
            +     D VT +  ++ +A    L   +    T LK    ++ +  N++I  YS+ G  
Sbjct: 250 EKMGSVPDQVTCVTIISTLASMGRLGDAR----TLLKRIRMTSTVAWNAVIASYSQSGLD 305

Query: 383 --VCGLRTD---------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
             V GL  D         + T AS+L A++++       +QIH  A+K+   A+ FV ++
Sbjct: 306 SEVFGLYKDMKKQGLMPTRSTFASILSAAANM-TAFDEGRQIHATAVKHGLDANVFVGSS 364

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI++Y ++G +++A+ +F+     ++  WNA+++G++ +    + +++F +M  +    D
Sbjct: 365 LINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEAD 424

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           + T  + + AC  L  L  G+Q+H   +K+G + DL V++ +LDMY K GA+  A+++F+
Sbjct: 425 DFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFS 484

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            IP  D V+W  +I G   N EE  A+++  +M+  G+  DE +FA  + A S + A+E 
Sbjct: 485 LIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIET 544

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIH+  IK +  S+  VG SL+D+Y+K G++E +  +   +D  + V  NA++ GL Q
Sbjct: 545 GKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQ 604

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +   +E ++LF+ +   G +P + TF  +LS C+
Sbjct: 605 NNREDEAIELFQQVLKDGFKPSNFTFTSILSGCT 638



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 134/605 (22%), Positives = 261/605 (43%), Gaps = 91/605 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + SIL  A + +    G+  HA  +      + F+ ++L+ +Y + G +  A+++F
Sbjct: 323 TRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF 382

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D   +++++ WN+IL  +  +     E   E  ++F+ +R +       T   +L  C++
Sbjct: 383 DFSTEKNIVMWNAILYGFVQN-----ELQEETIQMFQYMRRADLEADDFTFVSVLGACIN 437

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +     VH   +K G+  D FV+ A++++YSK G I  AK LF  +  +D V W  +
Sbjct: 438 LYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNAL 497

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAI 286
           +   A N    E  ++   +   G+  D+ S    +   S++     GK+       Y +
Sbjct: 498 IVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNV 557

Query: 287 ------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                                   K+L + + S++V  N  ++G +Q      AIE F  
Sbjct: 558 CSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQ 617

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSK-- 379
           +++   +  + TF   L+      +  +G+Q+H  TLKS   +    +G SL+ +Y K  
Sbjct: 618 VLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCK 677

Query: 380 ---------------------MGCVCG---------------------LRTDQFTLASVL 397
                                   + G                     +R+D+ T  SVL
Sbjct: 678 LLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVL 737

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF-ENKDGFD 456
           +A S +   L   K+IH   +K+  V+    ++AL+D+Y + G +  +  +F E K+  +
Sbjct: 738 KACSEMA-ALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQN 796

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-- 514
           +  WN+MI G+  +  +++AL LF  M  S  + D++T+   + AC    ++ +G     
Sbjct: 797 IMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFD 856

Query: 515 ---HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
                Y +    +   C    ++D+  + G +  AQ + + +P   D V W T ++ C  
Sbjct: 857 SMSQVYGIVPRVDHYAC----LIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQM 912

Query: 571 NGEED 575
           + +E+
Sbjct: 913 HKDEE 917



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 167/373 (44%), Gaps = 46/373 (12%)

Query: 406 GLHLSKQ------IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG--FDL 457
           GLH + Q      +H   ++        +  AL+D+Y R+G +  A        G     
Sbjct: 62  GLHRTHQARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASS 121

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCLLMLKQGKQMHA 516
           A  ++++  +  S +    L+ F  +  S G   D+  IA  + AC  L  L+ G+Q+H 
Sbjct: 122 AAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHC 181

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
             +KSGF   +   +G++DMY KCG + DA+ +F+ I  PD + WT+MI+G    G    
Sbjct: 182 DVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQ 241

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL+++ +M   G VPD+ T         C+T                          ++ 
Sbjct: 242 ALALFSRMEKMGSVPDQVT---------CVT--------------------------IIS 266

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
             A  G + DA  L K++ M +TV WNA++   +Q G   E   L++DMK  G+ P   T
Sbjct: 267 TLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRST 326

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           F  +LSA +      E  +  H    K+G++  V   S L++   + G   +A + +   
Sbjct: 327 FASILSAAANMTAFDEGRQ-IHATAVKHGLDANVFVGSSLINLYVKHGCISDAKK-VFDF 384

Query: 757 PFEASASMHRALL 769
             E +  M  A+L
Sbjct: 385 STEKNIVMWNAIL 397



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 12/203 (5%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           SL+ F +   +   S  + + S+L+     + L  GK  H  I+ S  +     T+ LM 
Sbjct: 714 SLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMD 773

Query: 97  MYSRCGSLVYARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
           MYS+CG ++ +  +F ++ +R +++ WNS++  +A +G  N     E   LF+ ++ES  
Sbjct: 774 MYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYAN-----EALLLFQKMQESQI 828

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGY---ALKIGLVWDEFVSGALVNIYSKFGKIRE 212
               +TL  +L  C  +G +  SE +H +   +   G+V        L+++  + G +++
Sbjct: 829 KPDDVTLLGVLIACSHAGLI--SEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQK 886

Query: 213 AKFLFDGMQER-DVVLWKVMLRA 234
           A+ + D +  R D V+W   L A
Sbjct: 887 AQEVIDQLPFRADGVIWATYLAA 909


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/718 (31%), Positives = 376/718 (52%), Gaps = 101/718 (14%)

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-----NVQYDSVTFLVALAAVAGT 345
           Y +  N+  WN  +S Y++ G  H A+ C VN + S     +++ D  TF   L A    
Sbjct: 79  YIHKKNIFSWNSIISAYVRFGKYHEAMNC-VNQLFSMCGGGHLRPDFYTFPPILKACV-- 135

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------- 383
            +L  G+++H    K GF   V V  SL+++YS+ G +                      
Sbjct: 136 -SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194

Query: 384 ---C------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
              C                  G++ D  T+AS+L   +   + ++    IH+H +K+  
Sbjct: 195 SGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN-GVLIHLHVLKHGL 253

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
            +D FVS ALI++Y + G + +A+ +F+  +  DL +WN++I  Y  +N+   AL  F  
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCG 541
           M   G R D +T+ +       L   +  + +  + ++  + + D+ + + +++MY K G
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILV 600
            M  A ++F+ +P  D ++W T+++G   NG    A+  Y+ M      +P++ T+  ++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A S + AL+QG +IHA LIK     D FV   L+D+Y KCG +EDA  LF ++    +V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WNA++  L  HG GEE L+LF+DM A  V+ D +TF+ +LSACS++GLV E  + F +M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +++YGI+P ++HY  +VD LGRAG  ++A EL+ +MP +  AS+  ALL AC++ G+ E 
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
           G   +++L+ ++  +   YVLLSNI+A   +W+ V   R   + + ++K P         
Sbjct: 614 GTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGS 673

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                            I+ +++ L  ++K  GYVPD  FV  D+EE+EKE+ L  HSE+
Sbjct: 674 KAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSER 733

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGM 912
           LA A+G+ISTPP S I                     +S +E +   +NRFHH +DG+
Sbjct: 734 LAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 166/319 (52%), Gaps = 9/319 (2%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K++H   +      +  +ST LI++Y  +G ++ +   F+     ++ +WN++I  Y+ 
Sbjct: 38  TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVR 97

Query: 470 SNNSHKAL----ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
               H+A+    +LFS       R D  T    +KAC  L+    GK++H    K GFE 
Sbjct: 98  FGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFED 154

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D+ V++ ++ +Y + G +  A  +F D+P  D  +W  MISG   NG    AL + ++M+
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
             GV  D  T A ++   +    +  G  IH +++K    SD FV  +L++MY+K G ++
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQ 274

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           DA ++F QM++R+ V WN+++    Q+ +    L+ F+ M+  G+ PD +T + + S  S
Sbjct: 275 DAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 706 YTG--LVSEAYENFHLMRE 722
                 +S +   F + RE
Sbjct: 335 QLSDQRISRSILGFVIRRE 353



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 194/439 (44%), Gaps = 64/439 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+  +S  D   GK  H  +       D F+  +L+ +YSR G L  A ++F  MP +D
Sbjct: 130 ILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           + SWN++++ +  +G     N      +   ++        +T+A +L +C  S  V   
Sbjct: 187 VGSWNAMISGFCQNG-----NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H + LK GL  D FVS AL+N+YSKFG++++A+ +FD M+ RD+V W  ++ AY +N
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKL--------- 288
                    F  +   G+ PD  +V  +  + S L  +R    +  + I+          
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361

Query: 289 ----------LLYNNNSNVVL----------WNKKLSGYLQVGDNHGAIECFVNMIRS-- 326
                     L Y N ++ V           WN  ++GY Q G    AI+ + NM+    
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECR 420

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           +   +  T++  + A +    L  G +IH   +K+  Y  V V   LI++Y K    CG 
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK----CGR 476

Query: 387 RTDQFTLASVLRASSSLP---------------EGLHLSKQIHVHAIKNDTVADSFVSTA 431
             D  +L   +   +S+P               E L L K +    +K D +  +FVS  
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI--TFVS-- 532

Query: 432 LIDVYCRNGSMAEAEYLFE 450
           L+     +G + E +  F+
Sbjct: 533 LLSACSHSGLVDEGQKCFD 551



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 139/589 (23%), Positives = 242/589 (41%), Gaps = 97/589 (16%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA +L   +  +  L+  L+ +Y   G +  +R  FD +  +++ SWNSI++AY   
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+ + E +    +LF             T  P+LK C+S   +   + VH    K+G   
Sbjct: 99  GKYH-EAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFED 154

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG------------F 240
           D FV+ +LV++YS++G +  A  +F  M  +DV  W  M+  + +NG             
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214

Query: 241 GEEV-------------------------FHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           GE V                          HL V  H  GL  D      ++ + S  G+
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKH--GLDSDVFVSNALINMYSKFGR 272

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
             + Q+    +++       ++V WN  ++ Y Q  D   A+  F  M    ++ D +T 
Sbjct: 273 LQDAQMVFDQMEV------RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTV 326

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSKMGCV-C--------- 384
           +   +  +   +  + + I G  ++  +    V++GN+L+NMY+K+G + C         
Sbjct: 327 VSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP 386

Query: 385 -----------------GLRTD-----------------QFTLASVLRASSSLPEGLHLS 410
                            GL ++                 Q T  S++ A S +   L   
Sbjct: 387 RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHV-GALQQG 445

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            +IH   IKN    D FV+T LID+Y + G + +A  LF          WNA+I    + 
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIH 505

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCV 529
               +AL+LF  M     + D IT  + + AC    ++ +G++      K  G +  L  
Sbjct: 506 GRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKH 565

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
              ++D+  + G +  A  +  ++P  PD   W  ++S C   G  +L 
Sbjct: 566 YGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELG 614



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 36/327 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL     + D++ G   H  +L      D F++N L+ MYS+ G L  A+ +FD+M  R
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SWNSI+AAY  + + +        R F+ ++        LT+  L  +         
Sbjct: 287 DLVSWNSIIAAYEQNNDPST-----ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRI 341

Query: 178 SETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           S ++ G+ ++   L  D  +  ALVN+Y+K G +  A  +FD +  +D + W  ++  Y 
Sbjct: 342 SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT 401

Query: 237 ENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN- 293
           +NG   E    +  +       P+  +   ++   S +G   +  ++ A  IK  LY + 
Sbjct: 402 QNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV 461

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                          V WN  ++     G    A++ F +M+  
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            V+ D +TF+  L+A + +  ++ GQ+
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQK 548



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 15/193 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SI+        L  G   HA+++ +S   D F+   L+ +Y +CG L  A  LF ++P
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               + WN+I+A+    G G      E  +LF+ +         +T   LL  C  SG V
Sbjct: 489 RDTSVPWNAIIASLGIHGRGE-----EALQLFKDMLAERVKADHITFVSLLSACSHSGLV 543

Query: 176 WASETVHG-----YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
              +         Y +K  L       G +V++  + G + +A  L   M  + D  +W 
Sbjct: 544 DEGQKCFDIMQKEYGIKPSLKH----YGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599

Query: 230 VMLRAYAENGFGE 242
            +L A    G  E
Sbjct: 600 ALLSACKIYGNAE 612



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 9/175 (5%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
           +SC+  +   +++HA L+    S +  +   L+++Y   G+I  +   F  +  +N   W
Sbjct: 30  NSCVN-VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSW 88

Query: 663 NAMLVGLAQHGNGEETL----KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
           N+++    + G   E +    +LF       + PD  TF  +L AC    LV    +  H
Sbjct: 89  NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVDG--KKVH 144

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
               K G E +V   + LV    R G    A ++ + MP +   S +  + G C+
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/579 (35%), Positives = 322/579 (55%), Gaps = 50/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D+FT  S+ ++   L EG    KQ+H H+ K    +D+++   L+++Y   G +  
Sbjct: 135 GLDPDRFTFPSLFKSCGVLCEG----KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVS 190

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+      + +W  MI  Y   +  H+A++LF  M  +  + +EIT+   + AC  
Sbjct: 191 ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACAR 250

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
              L+  KQ+H Y  ++G      ++S ++D+Y KCG    A+ +FN +P  +   W  M
Sbjct: 251 SRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIM 310

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G V++ + + ALS++++M+LSGV  D+ T A L+ A + L ALE G+ +H  + K   
Sbjct: 311 INGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI 370

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             D  +G +LVDMYAKCG+IE A  +F++M  ++ + W A++VGLA  G G + L+LF +
Sbjct: 371 EVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHE 430

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+   V+PD++TF+GVL+ACS+ GLV+E    F+ M  KYGI+P +EHY  +VD LGRAG
Sbjct: 431 MQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAG 490

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R  EA +LI +MP      +   LL ACR+ G+    +  A++L+ L+P +   YVLLSN
Sbjct: 491 RIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSN 550

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEG 841
           I+++   W+     R  M  +N+KK P                       +  I+  ++ 
Sbjct: 551 IYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDD 610

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------- 893
           +++R+K  GYVPD   VL D++E+EKE  L  HSEKLA A+GL+ST P + I        
Sbjct: 611 MMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRV 670

Query: 894 -------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                        + N+E +    NRFHH   G C C D
Sbjct: 671 CSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRD 709



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 170/350 (48%), Gaps = 8/350 (2%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           KQIH   ++     D F ++ ++  +C    +GS+  A  +F         T N++I GY
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIV-AFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGY 115

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
              N   +A+  +  M   G   D  T  +  K+CG L    +GKQ+H ++ K GF  D 
Sbjct: 116 TNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLC---EGKQLHCHSTKLGFASDA 172

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            + + +++MY  CG +V A+ +F+ +     V+W TMI           A+ ++ +M ++
Sbjct: 173 YIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIA 232

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            V P+E T   ++ A +    LE  +Q+H  + +        +  +L+D+Y KCG    A
Sbjct: 233 SVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLA 292

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             LF +M  +N   WN M+ G  +  + EE L LF +M+  GV+ D VT   +L AC++ 
Sbjct: 293 RDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHL 352

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           G + E  +  H+  EK  IE +V   + LVD   + G  + A  +   MP
Sbjct: 353 GAL-ELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP 401



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 59/437 (13%)

Query: 289 LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           L++N   N      N  + GY        AI  +  M+   +  D  TF  +L    G  
Sbjct: 95  LVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTF-PSLFKSCGV- 152

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC------------------------ 382
            L  G+Q+H  + K GF S   + N+L+NMYS  GC                        
Sbjct: 153 -LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIG 211

Query: 383 -------------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                              +  ++ ++ TL +VL A +     L  +KQ+H +  +    
Sbjct: 212 AYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACAR-SRDLETAKQVHKYIDETGIG 270

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
             + +++AL+DVYC+ G    A  LF      +L  WN MI G++  ++  +AL LF+ M
Sbjct: 271 FHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEM 330

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             SG + D++T+A+ + AC  L  L+ GK +H Y  K   E+D+ + + ++DMY KCG++
Sbjct: 331 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 390

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A  +F ++P  D + WT +I G    G+   AL ++H+M++S V PD  TF  ++ A 
Sbjct: 391 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           S    + +G   + N +       P +     +VDM  + G I +A  L + M M     
Sbjct: 451 SHAGLVNEGIA-YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYF 509

Query: 662 WNAMLVGLAQ----HGN 674
              +LVGL      HGN
Sbjct: 510 ---VLVGLLSACRIHGN 523



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 212/534 (39%), Gaps = 102/534 (19%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYS--RCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA++L +    D F  + ++   +    GSL YAR +F+++P+    + NSI+  Y 
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 131 HSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           +      +N+     LF  L         R T   L K C   G +   + +H ++ K+G
Sbjct: 117 N------KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLG 167

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D ++   L+N+YS  G +  A+ +FD M  + VV W  M+ AYA+     E   LF 
Sbjct: 168 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFR 227

Query: 250 DLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQ---------------------- 282
            +  + + P++ ++  VL   +     +  K+  + +                       
Sbjct: 228 RMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCG 287

Query: 283 AYAIKLLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
            Y +   L+N     N+  WN  ++G+++  D   A+  F  M  S V+ D VT    L 
Sbjct: 288 CYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLI 347

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A      L LG+ +H    K      V +G +L++MY+K G          ++ S +R  
Sbjct: 348 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG----------SIESAMRVF 397

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             +PE                                                  D+ TW
Sbjct: 398 QEMPEK-------------------------------------------------DVMTW 408

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAM 519
            A+I G  +     KALELF  M  S  + D IT    + AC    ++ +G    ++   
Sbjct: 409 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPN 468

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
           K G +  +     ++DM  + G + +A+ +  ++P APD      ++S C  +G
Sbjct: 469 KYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 522



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 170/384 (44%), Gaps = 50/384 (13%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPS-----FSLSLLPFLQKSHFSSSSSSSQW 56
           Y +L  N  P +  T+   S     T +NLP      + L +L  L    F+       +
Sbjct: 92  YARLVFNQIP-NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFT-------F 143

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+ +   S   L  GK  H          D ++ N LM MYS CG LV AR++FDKM +
Sbjct: 144 PSLFK---SCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN 200

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           + ++SW +++ AYA     +     E  +LFR +  +    + +TL  +L  C  S  + 
Sbjct: 201 KSVVSWATMIGAYAQWDLPH-----EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLE 255

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
            ++ VH Y  + G+ +   ++ AL+++Y K G    A+ LF+ M E+++  W +M+  + 
Sbjct: 256 TAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHV 315

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR----------HEEQVQA--- 283
           E+   EE   LF ++  SG+  D  ++  +L   + LG             +E+++    
Sbjct: 316 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 375

Query: 284 ----------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                            A+++       +V+ W   + G    G    A+E F  M  S 
Sbjct: 376 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 435

Query: 328 VQYDSVTFLVALAAVAGTDNLNLG 351
           V+ D++TF+  LAA +    +N G
Sbjct: 436 VKPDAITFVGVLAACSHAGLVNEG 459



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)

Query: 504 CLLMLK------QGKQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIPA 555
           CLL L+      Q KQ+HA  +++   +D   +S I+        G++  A+ +FN IP 
Sbjct: 43  CLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPN 102

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
           P      ++I G  +      A+  Y  M L G+ PD FTF  L K+   L    +G+Q+
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLC---EGKQL 159

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H +  KL  +SD ++  +L++MY+ CG +  A  +F +M  ++ V W  M+   AQ    
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E +KLF  M+   V+P+ +T + VL+AC+ +  + E  +  H   ++ GI       S 
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDL-ETAKQVHKYIDETGIGFHTVLTSA 278

Query: 736 LVDALGRAGRTKEAGELILSMP 757
           L+D   + G    A +L   MP
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMP 300


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/711 (32%), Positives = 363/711 (51%), Gaps = 89/711 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V  W + +  Y Q GD   A+  F  M   +V    VT++  L A A T++L  G +IH
Sbjct: 69  DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 128

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCG-----------------------LRTDQFT 392
           G  L+ GF   V VG +LINMY+K G V G                       ++ DQF 
Sbjct: 129 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 188

Query: 393 LASVLRASSSL----PEGL-------------HLSKQIHVHAIKNDTV--ADSFVSTALI 433
           LA  L     L    P  +             +LS+   V+ + +  V  +D  V  + +
Sbjct: 189 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAV 248

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           +++   G + +A  LFE+    D+ TWN +I  Y+ + N  +A+ LF  +   G + ++I
Sbjct: 249 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDI 308

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T    +     L  L +GK +H    ++G++ D  V++ ++ +Y +C A   A  IF D+
Sbjct: 309 TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDM 368

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
            + D + WT M      NG    AL ++ +M+L G  P   T   ++   + L AL++GR
Sbjct: 369 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 428

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           QIH+++I+     +  V  +L++MY KCG + +A  +F++M  R+ ++WN+ML   AQHG
Sbjct: 429 QIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHG 488

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +ETL+LF  M+  GV+ D+V+F+ VLSA S++G V++ Y+ F  M + + I P  E Y
Sbjct: 489 YYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 548

Query: 734 SFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
             +VD LGRAGR +EA +++L +        +   LLGACR    T+  K  AE+++  +
Sbjct: 549 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 608

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
           P  S AYV+LSN++AAA  WD V   R  M+ + VKK+P                     
Sbjct: 609 PSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSH 668

Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
                I+A+++ L   ++  GY+PDT  +L DVE+E KE  L+YHSE+LA A+GLISTPP
Sbjct: 669 PRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPP 728

Query: 890 SSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            + +                     L  +E L    +RFH+ +DG C C D
Sbjct: 729 GTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKD 779



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 135/606 (22%), Positives = 259/606 (42%), Gaps = 89/606 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+   S  ++  G+  H  + +     +  +  +L+ MY++CGS+  A+++F+ +  +
Sbjct: 9   ALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERK 68

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ +W  ++  Y   G+ +         +F  ++E     +++T   +L  C S+  +  
Sbjct: 69  DVFAWTRMIGIYCQQGDYD-----RALGMFYQMQEEDVMPTKVTYVAILNACASTESLKD 123

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HG  L+ G   D FV  AL+N+Y+K G +R A   F  ++ RDVV W  M+ A  +
Sbjct: 124 GMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQ 183

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQV 281
           +        L+  +   G+ P+  ++  V                 G++S      + +V
Sbjct: 184 HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRV 243

Query: 282 QAYAIKLL-----------LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
              A+ +            L+ +  + +VV WN  ++ Y+Q  +   A+  F  + +  V
Sbjct: 244 MNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGV 303

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------- 379
           + + +TF++ L       +L  G+ IH    ++G+    +V  +L+++Y +         
Sbjct: 304 KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWK 363

Query: 380 ----MG----------CVC--------------------GLRTDQFTLASVLRASSSLPE 405
               MG          CV                     G R    TL +VL   + L  
Sbjct: 364 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLA- 422

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   +QIH H I+N    +  V TALI++Y + G MAEA  +FE     D+  WN+M+ 
Sbjct: 423 ALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLG 482

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMK 520
            Y       + L+LF+ M   G + D ++  + + A      +  G Q     +  +++ 
Sbjct: 483 AYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSIT 542

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA--PDDVAWTTMISGCVDNGEEDLAL 578
              EL  CV    +D+  + G + +A  I   +    PD + W T++  C  + + D A 
Sbjct: 543 PTPELYGCV----VDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 598

Query: 579 SIYHQM 584
           +   Q+
Sbjct: 599 AAAEQV 604



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 131/258 (50%), Gaps = 1/258 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           ++ C     +  G+++H +    GFE +  V   ++ MY +CG++ +AQ +F  +   D 
Sbjct: 11  LQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDV 70

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            AWT MI      G+ D AL +++QM+   V+P + T+  ++ A +   +L+ G +IH  
Sbjct: 71  FAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQ 130

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           +++     D FVG +L++MY KCG++  A+  FK+++ R+ V W AM+    QH      
Sbjct: 131 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 190

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             L+  M+  GV P+ +T   V +A      +SE    + L+     +E +V   +  V+
Sbjct: 191 RWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-MESDVRVMNSAVN 249

Query: 739 ALGRAGRTKEAGELILSM 756
             G AG   +A  L   M
Sbjct: 250 MFGNAGLLGDARRLFEDM 267



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 182/438 (41%), Gaps = 49/438 (11%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           +  +L  F Q        +   + +IL    ST  L  G   H +IL      D F+   
Sbjct: 86  YDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTA 145

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY++CGS+  A   F ++  RD++SW +++AA         +       L+R ++  
Sbjct: 146 LINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH-----DQFALARWLYRRMQLD 200

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               +++TL  +        Y+   + V+G      +  D  V  + VN++   G + +A
Sbjct: 201 GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDA 260

Query: 214 KFLFDGMQERDVVLWKVMLRAYAEN-GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           + LF+ M +RDVV W +++  Y +N  FGE V  LF  L + G+  +D +   +L V + 
Sbjct: 261 RRLFEDMVDRDVVTWNIVITLYVQNENFGEAV-RLFGRLQQDGVKANDITFVLMLNVYTS 319

Query: 273 L-----GKRHEEQVQ------------------------AYAIKLLLYNNNSNVVLWNKK 303
           L     GK   E V+                          A K+ +   + +V+ W   
Sbjct: 320 LTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVM 379

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
              Y Q G    A++ F  M     +  S T +  L   A    L  G+QIH   +++ F
Sbjct: 380 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRF 439

Query: 364 YSAVIVGNSLINMYSKMGCVCG--------LRTDQFTLASVLRASSS---LPEGLHLSKQ 412
              ++V  +LINMY K G +           + D     S+L A +      E L L  Q
Sbjct: 440 RMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQ 499

Query: 413 IHVHAIKNDTVADSFVST 430
           + +  +K D V  SFVS 
Sbjct: 500 MQLDGVKADAV--SFVSV 515



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 2/198 (1%)

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD   F  L++  S    ++ GR++H ++       +  V   L+ MYA+CG++ +A  +
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F+ ++ ++   W  M+    Q G+ +  L +F  M+   V P  VT++ +L+AC+ T  +
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            +  E  H    + G E +V   + L++   + G  + A +    +      S   A++ 
Sbjct: 122 KDGME-IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSW-TAMIA 179

Query: 771 ACRVQGDTETGKWVAEKL 788
           AC         +W+  ++
Sbjct: 180 ACVQHDQFALARWLYRRM 197



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 18/191 (9%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S+   ++L      + L  G+  H+ I+ +    +  +   L+ MY +CG +  A  +F
Sbjct: 407 TSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVF 466

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           +KM  RD++ WNS+L AYA  G  +     E  +LF  ++        ++   +L     
Sbjct: 467 EKMAKRDILVWNSMLGAYAQHGYYD-----ETLQLFNQMQLDGVKADAVSFVSVLSALSH 521

Query: 172 SGYVWASETVHGYALKIGLVWDEFVS------GALVNIYSKFGKIREAKFLFDGMQE--R 223
           SG V       GY   + ++ D  ++      G +V++  + G+I+EA  +   +     
Sbjct: 522 SGSV-----TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 576

Query: 224 DVVLWKVMLRA 234
           D +LW  +L A
Sbjct: 577 DGILWMTLLGA 587


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/569 (37%), Positives = 323/569 (56%), Gaps = 52/569 (9%)

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           V++A   L +G    K+IH   +K     D FV+ +L+ +Y R G + +A  LF++    
Sbjct: 3   VVKACGDLLDG----KKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPAR 58

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D  +WNAMI GY  + N+ +AL++   M   G ++D IT+A+ +  C  +  +  GK +H
Sbjct: 59  DRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIH 118

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
            Y +K G E +L VS+ +++MY K G++  AQ +F  +   D V+W T+I+G   NG   
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLAS 177

Query: 576 LALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
            A+ +Y  M     ++P++ T+  ++ A S + AL+QG +IH  +IK    SD FVG  L
Sbjct: 178 EAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCL 237

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +DMY KCG ++DA  LF Q+  +N+V WNAM+     HG+GE+ L+LF +MKA  V+PD 
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           +TF+ +LSACS++GLVS+A   F++M E+YGI+P ++HY  +VD  GRAG  + A   I 
Sbjct: 298 ITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            MP +  AS   ALL ACR+ G+ E GK  +E+L  ++  +   YVLLSNI+A   +W+ 
Sbjct: 358 KMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEG 417

Query: 815 VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
           V   R   + + ++K+P                        + I+ ++  L  +IK  GY
Sbjct: 418 VDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGY 477

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV------------------- 892
           VPD  FVL DVEE+EKE  L  HSE+LA AYG+IST P +                    
Sbjct: 478 VPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKF 537

Query: 893 --ILSNKEPLY--ANRFHHLRDGMCPCAD 917
             I++ +E +   ++RFHH + G C C D
Sbjct: 538 ISIITEREIIVRDSSRFHHFKGGTCSCGD 566



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 148/310 (47%), Gaps = 38/310 (12%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           +  DLL GK  H  +L      D F+  +L+ MYSR G +  AR+LFD MP RD  SWN+
Sbjct: 6   ACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNA 65

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +++ Y  +G     N  E   +   +R        +T+A +L +C   G + + + +H Y
Sbjct: 66  MISGYCQNG-----NAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +K GL ++ FVS AL+N+Y+KFG +  A+ +F G+  +DVV W  ++  YA+NG   E 
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEA 179

Query: 245 F--HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLLLYNN-------- 293
              +L ++ H   + P+  +   +L   S +G   +  ++    IK  LY++        
Sbjct: 180 IEVYLLMEEHEE-IIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 294 --------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                 N V WN  +S Y   GD   A+E F  M    V+ D +
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298

Query: 334 TFLVALAAVA 343
           TF+  L+A +
Sbjct: 299 TFVSLLSACS 308



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 55/330 (16%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
           P++K C   G +   + +H   LK+G  WD FV+ +LV++YS+FG + +A+ LFD M  R
Sbjct: 2   PVVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPAR 58

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHE 278
           D   W  M+  Y +NG   E   +  ++   G+  D  +V  VL V + +     GK   
Sbjct: 59  DRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIH 118

Query: 279 EQVQAYAIKLLLYNNNS-----------------------NVVLWNKKLSGYLQVGDNHG 315
             V  + ++  L+ +N+                       +VV WN  ++GY Q G    
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASE 178

Query: 316 AIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
           AIE ++ M     +  +  T++  L A +    L  G +IHG  +K+  YS V VG  LI
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLP---------------EGLHLSKQIHVHAIK 419
           +MY K    CG   D  +L   +   +S+P               + L L +++    +K
Sbjct: 239 DMYGK----CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVK 294

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
            D +  +FVS  L+     +G +++A++ F
Sbjct: 295 PDHI--TFVS--LLSACSHSGLVSDAQWCF 320



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 23/303 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       D+L GK  H  ++      + F++N L+ MY++ GSL +A+++F  +  +
Sbjct: 100 SVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-K 158

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWN+++  YA +G   A    E + L     E I   ++ T   +L      G +  
Sbjct: 159 DVVSWNTLITGYAQNGL--ASEAIEVYLLMEEHEEII--PNQGTWVSILPAYSHVGALQQ 214

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HG  +K  L  D FV   L+++Y K GK+ +A  LF  +  ++ V W  M+  Y  
Sbjct: 215 GMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGV 274

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAIKLLLY 291
           +G GE+   LF ++    + PD  +   +L      G++SD         + Y IK  L 
Sbjct: 275 HGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLK 334

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNL 350
           +    V L+ +            G +E   N I+   +Q D+  +   L A     N+ L
Sbjct: 335 HYGCMVDLFGRA-----------GELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIEL 383

Query: 351 GQQ 353
           G+ 
Sbjct: 384 GKH 386



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
            L + H     +   W SIL        L  G   H +++ +    D F+   L+ MY +
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGK 243

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG L  A  LF ++P ++ + WN++++ Y   G+G      +   LFR ++        +
Sbjct: 244 CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGE-----KALELFREMKAERVKPDHI 298

Query: 161 TLAPLLKLCLSSGYV----WASETV-HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
           T   LL  C  SG V    W    +   Y +K  L       G +V+++ + G++  A  
Sbjct: 299 TFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKH----YGCMVDLFGRAGELEMAFN 354

Query: 216 LFDGMQ-ERDVVLWKVMLRA 234
               M  + D   W  +L A
Sbjct: 355 FIKKMPIQPDASAWGALLNA 374


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/686 (33%), Positives = 350/686 (51%), Gaps = 90/686 (13%)

Query: 294  NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN-LNLGQ 352
             ++V  W   +SG+ ++G +   +  F  M    V  +  T  + L + +   N   +G+
Sbjct: 349  QTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGK 408

Query: 353  QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
             IHG  L++G     ++ NS+++ Y K  C  G     F L +                 
Sbjct: 409  GIHGWILRNGLDLDAVLNNSILDYYVKCRCF-GYAEKLFGLMA----------------- 450

Query: 413  IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
                  + DTV+ + + ++    Y + G M ++  LF    G D A+WN MI G + +  
Sbjct: 451  ------EKDTVSWNIMMSS----YLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGC 500

Query: 473  SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
               ALEL   M  +G   +++T + A+     L +L  GKQ+H   +K G   D  V + 
Sbjct: 501  ERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNS 560

Query: 533  ILDMYVKCGAMVDAQSIFNDIP----------APDD-----VAWTTMISGCVDNGEEDLA 577
            ++DMY KCG M  A  IF  +P          + DD     V+W++M+SG V NG  + A
Sbjct: 561  LIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDA 620

Query: 578  LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
            L  +  M  S V  D+FT   +V A +    LE GRQ+H  + K+    D F+G S++DM
Sbjct: 621  LKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDM 680

Query: 638  YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
            Y KCG++ DA+++F Q   RN VLW +M+ G A HG G E ++LFE M   G+ P+ V+F
Sbjct: 681  YVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSF 740

Query: 698  IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +GVL+ACS+ GL+ E  + F LMRE YGI P  EH++ +VD  GRAGR  E  E I +  
Sbjct: 741  VGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNA 800

Query: 758  FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
                +S+ R+ L +CRV  + E G WV +KL+ LEPFD+  Y+L S+I A  ++W++   
Sbjct: 801  ISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAK 860

Query: 818  ARGEMKRKNVKKDPAD-----------------------LIFAKVEGLIKRIKEGGYVPD 854
             R  M+++ VKK+P+                         I++ ++ LI R+KE GY  D
Sbjct: 861  IRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTD 920

Query: 855  TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------------- 893
               V+ DVE+E+++  L YHSEKLA AYG+IST P + I                     
Sbjct: 921  VTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASE 980

Query: 894  LSNKEPLYAN--RFHHLRDGMCPCAD 917
            L  +E +  +  RFHH + G C CAD
Sbjct: 981  LLGREIIIRDIHRFHHFKHGHCSCAD 1006



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 177/700 (25%), Positives = 312/700 (44%), Gaps = 122/700 (17%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           FSLS   +    +FSS+ S S  +         S++L     HA+++ +  +  R   N+
Sbjct: 281 FSLSSYFYPPLXYFSSTFSDSMNYP-------NSEVL-----HAKLIKNGCVGIR--GNH 326

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ +Y++  +L  A ++F+++P  D+ SW  +++ +A  G        +   LF  +++ 
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLS-----ADVLGLFTKMQDQ 381

Query: 154 ITFTSRLTLAPLLKLCLSS-GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
               ++ TL+ +LK C S+       + +HG+ L+ GL  D  ++ ++++ Y K      
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGY 441

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ LF  M E+D V W +M+ +Y + G  ++   LF  L      P  ++          
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL------PGKDAAS-------- 487

Query: 273 LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                                      WN  + G ++ G    A+E    M+ +   ++ 
Sbjct: 488 ---------------------------WNTMIDGLMRNGCERVALELLYKMVAAGPAFNK 520

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFT 392
           +TF +AL   +    L LG+QIH   LK G      V NSLI+MY    C CG    +  
Sbjct: 521 LTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMY----CKCG----EME 572

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
            ASV+     LP+    S  ++     +D V +S                          
Sbjct: 573 KASVI--FKHLPQE---SSMMNSEESCDDAVVES-------------------------- 601

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
                 +W++M+ GY+ +     AL+ FS M  S   +D+ T+ + V AC    +L+ G+
Sbjct: 602 -----VSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGR 656

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           Q+H Y  K G  LD+ + S I+DMYVKCG++ DA  IFN     + V WT+MISGC  +G
Sbjct: 657 QVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHG 716

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG---RQIHANLIKLDCSSDPF 629
           +   A+ ++  M   G+ P+E +F  ++ A S    LE+G    ++   +  +   ++ F
Sbjct: 717 QGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHF 776

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTV-----LWNAMLVGLAQHGNGEETLKLFED 684
               +VD+Y + G + +     K+    N +     +W + L     H N E  + ++  
Sbjct: 777 T--CMVDLYGRAGRLNE----IKEFIHNNAISKLSSVWRSFLSSCRVHKNIE--MGIWVC 828

Query: 685 MKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            K   +EP D+  +I   S C+      EA +   LM+++
Sbjct: 829 KKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQR 868


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/723 (32%), Positives = 384/723 (53%), Gaps = 96/723 (13%)

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           L  ++ +++ W+  +S +        A+  FV+MI +    +   F  A  A +  + ++
Sbjct: 126 LMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS 185

Query: 350 LGQQIHGTTLKSGFY-SAVIVGNSLINMYSK----------------------------- 379
           +G  I G  +K+G+  S V VG  LI+M+ K                             
Sbjct: 186 VGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245

Query: 380 ---MG------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
               G               G   D+FTL+ V+ A +++ E L L +Q+H  AI++    
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM-ELLLLGQQLHSQAIRHGLTL 304

Query: 425 DSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-SHKALELF 480
           D  V   LI++Y +   +GSM  A  +F+     ++ +W AMI GY+       +AL+LF
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M  +    +  T ++ +KAC  L  L+ G+Q+  +A+K GF    CV++ ++ MY + 
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G + DA+  F+ +   + +++ T+I     N   + AL +++++   G+    FTFA L+
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
             ++ +  + +G QIHA +IK     +  V  +L+ MY++CGNIE A+ +F+ M+ RN +
Sbjct: 485 SGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVI 544

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +++ G A+HG   + L+LF  M   GV P+ VT+I VLSACS+ GLV+E +++F  M
Sbjct: 545 SWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSM 604

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
             ++G+ P +EHY+ +VD LGR+G   EA + I SMP++A A + R  LGACRV G+ E 
Sbjct: 605 YTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLEL 664

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
           GK  A+ ++  EP D +AY+LLSN++A+ ++WD+V++ R  MK K + K+          
Sbjct: 665 GKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVEN 724

Query: 832 --------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                         A  I+ +++ L  +IK+ GYVP+ DFVL DVEEE+KE+ L+ HSEK
Sbjct: 725 KVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEK 784

Query: 878 LARAYGLIST---PPSSV------------------ILSNKEPLY--ANRFHHLRDGMCP 914
           +A A+GLIST    P  V                  + + +E +   ANRFHH++DG C 
Sbjct: 785 IAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCS 844

Query: 915 CAD 917
           C +
Sbjct: 845 CNE 847



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 264/602 (43%), Gaps = 93/602 (15%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDRD 118
           L+  I T    +G   H ++  S    D    N+L+++YS+CG    A  +F  M   RD
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRD 132

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFR---LFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           LISW+++++ +A        N   GFR    F  + E+  + +    A   + C ++ +V
Sbjct: 133 LISWSAMVSCFA--------NNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFV 184

Query: 176 WASETVHGYALKIGLVWDEFVSG-ALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLR 233
              +++ G+ +K G +  +   G  L++++ K  G +  A  +F+ M ER+ V W +M+ 
Sbjct: 185 SVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMIT 244

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKL 288
              + G+  E   LF+D+  SG  PD  ++  V+   ++     LG++   Q   + + L
Sbjct: 245 RLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTL 304

Query: 289 ------LLYNN---------------------NSNVVLWNKKLSGYLQVGD-NHGAIECF 320
                  L N                      + NV  W   ++GY+Q G  +  A++ F
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             MI ++V  +  TF   L A A    L +G+Q+    +K GF S   V NSLI+MY++ 
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424

Query: 381 GCV-------------------------------------------CGLRTDQFTLASVL 397
           G +                                            G+    FT AS+L
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
             ++S+   +   +QIH   IK+    +  V  ALI +Y R G++  A  +FE+ +  ++
Sbjct: 485 SGAASIGT-IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHA 516
            +W ++I G+     + +ALELF  M   G R +E+T    + AC  + ++ +G K   +
Sbjct: 544 ISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKS 603

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
              + G    +   + I+D+  + G++ +A    N +P   D + W T +  C  +G  +
Sbjct: 604 MYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLE 663

Query: 576 LA 577
           L 
Sbjct: 664 LG 665



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 151/300 (50%), Gaps = 7/300 (2%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE-NKDGFDLATWNAMIFGYILSN 471
           +H    ++D   DS    +LI +Y + G   +A  +F       DL +W+AM+  +  +N
Sbjct: 88  VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNN 147

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVS 530
              +AL  F  M  +G   +E   A A +AC     +  G  +  + +K+G+ + D+CV 
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVG 207

Query: 531 SGILDMYVKC-GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            G++DM+VK  G +V A  +F  +P  + V WT MI+  +  G    A+ ++  M  SG 
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGY 267

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC---GNIED 646
            PD FT + ++ A + +  L  G+Q+H+  I+   + D  VG  L++MYAKC   G++  
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGN-GEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           A  +F Q+   N   W AM+ G  Q G   EE L LF  M    V P+  TF   L AC+
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 113/235 (48%), Gaps = 3/235 (1%)

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           HKA+    HM   G   D  T +  +K C        G  +H    +S  +LD    + +
Sbjct: 48  HKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL 107

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           + +Y KCG    A SIF  + +  D ++W+ M+S   +N     AL  +  M  +G  P+
Sbjct: 108 ISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKC-GNIEDAYIL 650
           E+ FA   +A S    +  G  I   +IK     SD  VG  L+DM+ K  G++  A+ +
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKV 227

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           F++M  RN V W  M+  L Q G   E + LF DM   G EPD  T  GV+SAC+
Sbjct: 228 FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 130/250 (52%), Gaps = 16/250 (6%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKS--THARILNSSQIPDR 88
           L  F   +L  +  +HF+ SS+       L+   + + L +G+   THA  L  S +   
Sbjct: 361 LDLFRGMILTHVIPNHFTFSST-------LKACANLAALRIGEQVFTHAVKLGFSSV--N 411

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            + N+L++MY+R G +  AR+ FD + +++LIS+N+++ AYA +      N  E   LF 
Sbjct: 412 CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKN-----LNSEEALELFN 466

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            + +     S  T A LL    S G +   E +H   +K GL  ++ V  AL+++YS+ G
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCG 526

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            I  A  +F+ M++R+V+ W  ++  +A++GF  +   LF  +   G+ P++ +   VL 
Sbjct: 527 NIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLS 586

Query: 269 VISDLGKRHE 278
             S +G  +E
Sbjct: 587 ACSHVGLVNE 596



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 1/144 (0%)

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           ++NG    A+S    M   G  PD  T+++ +K      + + G  +H  L + D   D 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
               SL+ +Y+KCG  E A  +F+ M   R+ + W+AM+   A +  G   L  F DM  
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 688 HGVEPDSVTFIGVLSACSYTGLVS 711
           +G  P+   F     ACS    VS
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVS 185


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 249/804 (30%), Positives = 390/804 (48%), Gaps = 114/804 (14%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  HA  + +    D F+   L+ MY+RCG L  A  LF+ MP R+L SW +IL+ Y 
Sbjct: 77  LGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYL 136

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G        E F LF+ L+             + K C   G V     +HG  +K   
Sbjct: 137 DHGL-----FEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRF 191

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             + +VS AL+++Y K G + +AK +   M ERD V W  ++ A A NG   E       
Sbjct: 192 CLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFL-- 249

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
                                       E++++    +       NVV W+  + G+ Q 
Sbjct: 250 ----------------------------EKMKSLDYSM------PNVVSWSAVIGGFAQN 275

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G +  AIE    M    +  ++ T    L A A    L+LG+Q+HG   +  F S  +V 
Sbjct: 276 GYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVV 335

Query: 371 NSLINMYSKMGCVCGLRTD--QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           N+L+++Y + G + G      +F++ +VL  ++                           
Sbjct: 336 NALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNT--------------------------- 368

Query: 429 STALIDVYCRNGSMAEAEYLFENKD--GFD--LATWNAMIFGYILSNNSHKALELFSHM- 483
              +I  YC +G +++A+ LF+  D  G +  L +WN++I GY+ +    +A  +F +M 
Sbjct: 369 ---MIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNML 425

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
              G   D  T+ + + AC   + L+QGK++HA A+  G + D  V   +++MY KC  +
Sbjct: 426 MEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDL 485

Query: 544 VDAQSIFN-----DIPA------------------------------PDDVAWTTMISGC 568
             AQ  F+     D+P                               P+   W ++++G 
Sbjct: 486 TAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGL 545

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V+N + DL + ++ +M++S + PD +T  I++ A S L  LE+G+Q HA+ IK    +D 
Sbjct: 546 VENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDV 605

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            +G +LVDMYAKCG+++ A + + ++   N V  NAML   A HG+GEE + LF+ M A 
Sbjct: 606 HIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLAL 665

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G  PD VTF+ VLS+C + G V    E F LM   Y ++P ++HY+ +VD L R+G+  E
Sbjct: 666 GFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLHE 724

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A ELI  MP E  + +  ALLG C   G+ E G+  AE+L+ LEP +S  YVLL+N+ A 
Sbjct: 725 AYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAY 784

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA 832
           A +W D+   RG MK + + K P 
Sbjct: 785 ARRWTDLARVRGMMKDRGMHKSPG 808



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 157/324 (48%), Gaps = 43/324 (13%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A+ + +C C    K GKQ+HA+ +K+GF+ D  + + +L MY +CG + DA  +F  +P 
Sbjct: 66  ASVLDSCKCP---KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPM 122

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            +  +W  ++S  +D+G  + A  ++  ++  GV  D F F ++ KA S L ++E GRQ+
Sbjct: 123 RNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQL 182

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN------------ 663
           H  +IK     + +V  +L+DMY KCG+++DA  +  +M  R++V WN            
Sbjct: 183 HGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMV 242

Query: 664 ------------------------AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
                                   A++ G AQ+G  EE +++   M+  G+ P++ T  G
Sbjct: 243 YEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAG 302

Query: 700 VLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
           VL AC+    +    + + ++ R  +   P V   + LVD   R G    A ++ L    
Sbjct: 303 VLPACARLQRLDLGKQLHGYITRHDFISNPVV--VNALVDVYRRCGDMGGAAKIFLKFSV 360

Query: 759 EASASMHRALLGACRVQGDTETGK 782
           +   S +  ++G C   GD    K
Sbjct: 361 KNVLSCNTMIVGYCE-SGDVSKAK 383



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 45/330 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L     T  L  GK  HA+ +      D F+   L+ MYS+C  L  A+  FD++ ++
Sbjct: 439 SVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEK 498

Query: 118 DLISWNSILAAYAHS--------------GEGNAENVTE----------------GFRLF 147
           D+ +WN++++ Y  S              G+G   N+                    +LF
Sbjct: 499 DVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLF 558

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             ++ S       T+  +L  C     +   +  H +++K G   D  +  ALV++Y+K 
Sbjct: 559 SEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKC 618

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G ++ A+  +D +   ++V    ML A A +G GEE   LF  +   G  PD  +   VL
Sbjct: 619 GSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVL 678

Query: 268 GVISDLGKRHE-----EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                +G         + +  Y +K  L +  S V L ++        G  H A E    
Sbjct: 679 SSCVHVGSVETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRS-------GQLHEAYELIKK 731

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           M    V+ DSV +   L       N+ LG+
Sbjct: 732 M---PVECDSVLWGALLGGCVTHGNIELGE 758


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 252/874 (28%), Positives = 413/874 (47%), Gaps = 125/874 (14%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LL LC+++  +   + +H   LK  L    F++  LV +Y K G +R+A  +FD M ER 
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQA 283
           +  W  ++ A+  +G   E   L+ D+   G+  D  +   VL     LG+ R   ++  
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 284 YAIK-------------LLLYNN-----------------NSNVVLWNKKLSGYLQVGDN 313
            A+K             + +Y                     + V WN  +S ++  G+ 
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M    V  ++ TF+ AL  V     + LG  IHG  LKS  ++ V V N+L
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289

Query: 374 INMYSKMG-----------CVC--------------------------------GLRTDQ 390
           I MY+K G            +C                                G + DQ
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            ++ +++ A+S     L   K++H +AI+N   ++  +   L+D+Y +   +    + FE
Sbjct: 350 VSVLNLI-AASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFE 408

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                DL +W  +I GY  +    +A+ LF  +   G  +D + I + ++AC  L     
Sbjct: 409 CMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            +++H Y  K     D+ + + I+++Y + G +  A+  F  I + D V+WT+MI+ CV 
Sbjct: 469 IREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVH 527

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           NG    AL +++ ++ + + PD       + A++ L++L++G++IH  LI+     +  +
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI 587

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             SLVDMYA CG +E++  +F  +  R+ +LW +M+     HG G + + LF+ M    V
Sbjct: 588 ASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNV 647

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            PD +TF+ +L ACS++GL+ E    F +M+  Y +EP  EHY+ +VD L R+   +EA 
Sbjct: 648 IPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAY 707

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
             + +MP + S+ +  ALLGAC +  + E G+  A++L+  +  +S  Y L+SNIFAA  
Sbjct: 708 HFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADG 767

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI- 846
           +W+DV   R  MK   +KK+P                        D I+ K+    K + 
Sbjct: 768 RWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLE 827

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK--------- 897
           K+GGY+  T FV  +V EEEK + LY HSE+LA  YGL+ TP  + I   K         
Sbjct: 828 KKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCH 887

Query: 898 -----------EPLY---ANRFHHLRDGMCPCAD 917
                       PL    ANRFHH   G+C C D
Sbjct: 888 TFFKIASEVSQRPLVVRDANRFHHFERGLCSCGD 921



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 191/726 (26%), Positives = 331/726 (45%), Gaps = 96/726 (13%)

Query: 32  PSF-SLSLL---PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           P+F SL+LL   P    S    + S      +L   ++   L  G+  HA +L S     
Sbjct: 26  PAFQSLTLLSTHPLATPSRLEHAHSL-----LLDLCVAAKALPQGQQLHALLLKSHL--S 78

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            FL   L+ MY +CGSL  A ++FD+M +R + SWN+++ A+  SG+       E   L+
Sbjct: 79  AFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGK-----YLEAIELY 133

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           + +R         T   +LK C + G       +HG A+K G     FV  AL+ +Y K 
Sbjct: 134 KDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKC 193

Query: 208 GKIREAKFLFDG--MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           G +  A+ LFDG  M++ D V W  ++ A+   G   E   LF  +   G+  +  +   
Sbjct: 194 GDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVA 253

Query: 266 VLGVISD--------------LGKRHEEQVQAYAIKLLLYNNNSNV-------------- 297
            L  + D              L   H   V      + +Y     +              
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRD 313

Query: 298 -VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            V WN  LSG +Q      A+  F +M  S  + D V+ L  +AA   + NL  G+++H 
Sbjct: 314 YVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHA 373

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCV--------C------------------------ 384
             +++G  S + +GN+L++MY+K  CV        C                        
Sbjct: 374 YAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLE 433

Query: 385 -----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      G+  D   + SVLRA S L +  +  ++IH +  K D +AD  +  A++
Sbjct: 434 AINLFRKVQVKGMDVDPMMIGSVLRACSGL-KSRNFIREIHGYVFKRD-LADIMLQNAIV 491

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           +VY   G +  A   FE+    D+ +W +MI   + +    +ALELF  +  +  + D I
Sbjct: 492 NVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSI 551

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
            I +A+ A   L  LK+GK++H + ++ GF L+  ++S ++DMY  CG + +++ +F+ +
Sbjct: 552 AIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV 611

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D + WT+MI+    +G  + A++++ +M    V+PD  TF  L+ A S    + +G+
Sbjct: 612 KQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGK 671

Query: 614 QIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLA 670
           +    ++K     +P+      +VD+ ++  ++E+AY   + M ++ ++ +W A+L    
Sbjct: 672 RFF-EIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACH 730

Query: 671 QHGNGE 676
            H N E
Sbjct: 731 IHSNKE 736



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 204/395 (51%), Gaps = 15/395 (3%)

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
           TLK  F S  ++    +   S+      L      L  +  A+ +LP+G    +Q+H   
Sbjct: 23  TLKPAFQSLTLLSTHPLATPSR------LEHAHSLLLDLCVAAKALPQG----QQLHALL 72

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +K+   A  F++T L+ +Y + GS+ +A  +F+      + +WNA++  ++ S    +A+
Sbjct: 73  LKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAI 130

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           EL+  M   G  +D  T  + +KACG L   + G ++H  A+K G+   + V + ++ MY
Sbjct: 131 ELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMY 190

Query: 538 VKCGAMVDAQSIFNDI--PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            KCG +  A+ +F+ I     D V+W ++IS  V  G    ALS++ +M+  GV  + +T
Sbjct: 191 GKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYT 250

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F   ++     + ++ G  IH  ++K +  +D +V  +L+ MYAKCG +EDA  +F+ M 
Sbjct: 251 FVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESML 310

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            R+ V WN +L GL Q+    + L  F DM+  G +PD V+ + +++A   +G + +  E
Sbjct: 311 CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKE 370

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
             H    + G++  ++  + LVD   +    K  G
Sbjct: 371 -VHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMG 404



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 251/600 (41%), Gaps = 91/600 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK--MP 115
           S+L+   +  +  LG   H   +        F+ N L+ MY +CG L  AR LFD   M 
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
             D +SWNSI++A  H  EGN     E   LFR ++E    ++  T    L+      +V
Sbjct: 210 KEDTVSWNSIISA--HVAEGNC---LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +HG  LK     D +V+ AL+ +Y+K G++ +A  +F+ M  RD V W  +L   
Sbjct: 265 KLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGL 324

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE----EQVQAYAIKLLLY 291
            +N    +  + F D+  SG  PD  S   VL +I+  G+       ++V AYAI+  L 
Sbjct: 325 VQNELYSDALNYFRDMQNSGQKPDQVS---VLNLIAASGRSGNLLKGKEVHAYAIRNGLD 381

Query: 292 NN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +N                              +++ W   ++GY Q   +  AI  F  +
Sbjct: 382 SNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKV 441

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-- 381
               +  D +     L A +G  + N  ++IHG   K    + +++ N+++N+Y ++G  
Sbjct: 442 QVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHI 500

Query: 382 ------------------------CV-----------------CGLRTDQFTLASVLRAS 400
                                   CV                   ++ D   + S L A+
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSAT 560

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           ++L   L   K+IH   I+     +  ++++L+D+Y   G++  +  +F +    DL  W
Sbjct: 561 ANL-SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILW 619

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            +MI    +    +KA+ LF  M       D IT    + AC    ++ +GK+     MK
Sbjct: 620 TSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEI-MK 678

Query: 521 SGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            G++L+      + ++D+  +  ++ +A     ++P  P    W  ++  C  +  ++L 
Sbjct: 679 YGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELG 738


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 290/982 (29%), Positives = 454/982 (46%), Gaps = 143/982 (14%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
             +  H + +    + + FL+N L+ +Y R G L  A++LFD+M +R+L++W  +++ Y  
Sbjct: 563  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 132  SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS--ETVHGYALKIG 189
            +G+ +     E    FR +  +    +       L+ C  SG         +HG   K  
Sbjct: 623  NGKPD-----EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTR 677

Query: 190  LVWDEFVSGALVNIY-SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
               D  V   L+++Y S      +A+ +FD +  R+ + W  ++  Y+  G     + LF
Sbjct: 678  YGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLF 737

Query: 249  VDLHRSGLC----PDD-----------ESVQCVLGVISDLGKRHEEQ------------V 281
              + + GL     P++            SV   L V+  +  R E+             V
Sbjct: 738  SSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALV 797

Query: 282  QAYAIKLLLYNNNS--------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
              +A   L  +  +        NVV  N  + G ++      A + F  M +  V  +S 
Sbjct: 798  SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 856

Query: 334  TFLVALAAVAG----TDNLNLGQQIHGTTLKSGFY-SAVIVGNSLINMYSKMGCVC---- 384
            +++V L+A +      +    G+++H   +++G   + V +GN L+NMY+K G +     
Sbjct: 857  SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916

Query: 385  ---------------------------------------GLRTDQFTLASVLRASSSLPE 405
                                                   G     FTL S L + +SL  
Sbjct: 917  VFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLG- 975

Query: 406  GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
             + L +QIH   +K     D  VS AL+ +Y   G   E   +F     +D  +WN++I 
Sbjct: 976  WIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIG 1035

Query: 466  GYILSNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
                S  S  +A++ F  M   G  L  +T    + A   L + +   Q+HA  +K    
Sbjct: 1036 ALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLS 1095

Query: 525  LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             D  + + +L  Y KCG M + + IF  +    D+V+W +MISG + N     A+ +   
Sbjct: 1096 DDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF 1155

Query: 584  MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            M   G   D FTFA ++ A + +  LE+G ++HA  I+    SD  VG +LVDMY+KCG 
Sbjct: 1156 MMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGR 1215

Query: 644  IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT-FIGVLS 702
            I+ A   F+ M +RN   WN+M+ G A+HG+GE+ LKLF  M   G  PD V   +GVLS
Sbjct: 1216 IDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLS 1275

Query: 703  ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
            ACS+ G V E +E+F  M E Y + P VEH+S +VD LGRAG+  E G+ I SMP + + 
Sbjct: 1276 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 1335

Query: 763  SMHRALLGA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
             + R +LGA CR  G +TE G+  AE L+ LEP ++  YVLL+N++A+  +W+DV  AR 
Sbjct: 1336 LIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARX 1395

Query: 821  EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
             MK   VKK+                         D I+ K+  L +++++ GY+P T +
Sbjct: 1396 AMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKY 1455

Query: 858  VLLDVEEEEKERALYYHSEKLARAYGLI--STPPSSV-------------------ILSN 896
             L D+E E KE  L YHSEK+A A+ L   S  P  +                   I+  
Sbjct: 1456 ALFDLELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGR 1515

Query: 897  KEPLY-ANRFHHLRDGMCPCAD 917
            +  L  +NRFHH  DG C C D
Sbjct: 1516 QIVLRDSNRFHHFEDGKCSCGD 1537



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 191/701 (27%), Positives = 314/701 (44%), Gaps = 105/701 (14%)

Query: 71   LGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARRLFDKMPDRDLISWNSILAAY 129
            LG   H  I  +    D  + N L++MY  C  S   AR +FD++  R+ ISWNSI++ Y
Sbjct: 665  LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVY 724

Query: 130  AHSGEGNAENVTEGFRLFRSL-RESITFT---SRLTLAPLLKLCLSSG--YVWASETVHG 183
            +  G+         + LF S+ +E + F+   +  T   L+    SS    +   E +  
Sbjct: 725  SRRGD-----XVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLA 779

Query: 184  YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE- 242
               K G + D +V  ALV+ +++FG   +AK +F+ M  R+VV    ++    +   GE 
Sbjct: 780  RVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 839

Query: 243  --EVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNS 295
              +VFH   DL    +  + +S   +L   S+      G+R   +V A+ I+  L +N  
Sbjct: 840  AAKVFHEMKDL----VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKV 895

Query: 296  NV-----------------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
             +                             V WN  +SG  Q   +  A E F+ M R+
Sbjct: 896  AIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRT 955

Query: 327  NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---- 382
                 + T +  L++ A    + LG+QIH   LK G  + V V N+L+ +Y++ GC    
Sbjct: 956  GSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC 1015

Query: 383  -----------------VCGLRTD-----------------------QFTLASVLRASSS 402
                             V G  +D                       + T  ++L A SS
Sbjct: 1016 LKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSS 1075

Query: 403  LPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATW 460
            L   LH +S QIH   +K     D+ +  AL+  Y + G M E E +F    +  D  +W
Sbjct: 1076 L--SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSW 1133

Query: 461  NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            N+MI GYI +   HKA++L   M   G+RLD  T AT + AC  +  L++G ++HA  ++
Sbjct: 1134 NSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIR 1193

Query: 521  SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
            +  E D+ V S ++DMY KCG +  A   F  +P  +  +W +MISG   +G  + AL +
Sbjct: 1194 ACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKL 1253

Query: 581  YHQMRLSGVVPDEFTFAI-LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMY 638
            + +M L G  PD     + ++ A S +  +E+G +   ++ ++   S      S +VD+ 
Sbjct: 1254 FTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLL 1313

Query: 639  AKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEET 678
             + G +++       M M+ N ++W  +L G     NG  T
Sbjct: 1314 GRAGKLDEVGDFINSMPMKPNVLIWRTVL-GACCRANGRNT 1353



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 181/754 (24%), Positives = 322/754 (42%), Gaps = 95/754 (12%)

Query: 138  ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            +++ + ++   S   +  F+S  T   L+     S     +  +H  ++K G V + F+S
Sbjct: 523  QDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLS 582

Query: 198  GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
              L+NIY + G +  A+ LFD M  R++V W  ++  Y +NG  +E    F D+ R+G  
Sbjct: 583  NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFI 642

Query: 258  PDDESVQCVLGVISDLGK----------------RHEEQVQAYAIKLLLYN------NNS 295
            P+  +    L    + G                 R+   V    + + +Y       N++
Sbjct: 643  PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDA 702

Query: 296  ----------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY----DSVTFLVALAA 341
                      N + WN  +S Y + GD   A + F +M +  + +    +  TF   + A
Sbjct: 703  RSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITA 762

Query: 342  VAGTDNLNLG--QQIHGTTLKSGFYSAVIVGNSLI-------------NMYSKMGC---- 382
               + +  L   +Q+     KSGF   + VG++L+             N++ +MG     
Sbjct: 763  ACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVV 822

Query: 383  ---------------------------VCGLRTDQFT-LASVLRASSSLPEGLHLSKQIH 414
                                       + G+ +D +  L S     S L EG    +++H
Sbjct: 823  SMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVH 882

Query: 415  VHAIK----NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
             H I+    ++ VA   +   L+++Y ++G++A+A  +FE     D  +WN++I G   +
Sbjct: 883  AHVIRTGLNDNKVA---IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 939

Query: 471  NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
              S  A E F  M  +G      T+ + + +C  L  +  G+Q+H   +K G + D+ VS
Sbjct: 940  ECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVS 999

Query: 531  SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL--ALSIYHQMRLSG 588
            + +L +Y + G   +   +F+ +P  D V+W ++I G + + E  +  A+  + +M   G
Sbjct: 1000 NALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYFLEMMRGG 1058

Query: 589  VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
                  TF  ++ A S L+  E   QIHA ++K   S D  +G +L+  Y KCG + +  
Sbjct: 1059 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECE 1118

Query: 649  ILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F +M + R+ V WN+M+ G   +    + + L   M   G   DS TF  VLSAC+  
Sbjct: 1119 KIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASV 1178

Query: 708  GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
              +    E  H    +  +E +V   S LVD   + GR   A      MP     S +  
Sbjct: 1179 ATLERGME-VHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSM 1237

Query: 768  LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
            + G  R     +  K     ++  +P D  A +L
Sbjct: 1238 ISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLL 1271



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 189/409 (46%), Gaps = 18/409 (4%)

Query: 462 AMIFGYILSNNSHKALE-LFSHMHTSGERLDEITIATAVKACGCLLMLKQG-------KQ 513
           +++F  +  N   K+L+ L  H  TS    +  T+ ++ +    L+   QG       ++
Sbjct: 507 SLLFKPLNPNQCTKSLQDLVDHYKTSTSHCN-TTLFSSSETFESLINRYQGSCCSEEARE 565

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H  ++K GF  +L +S+ ++++YV+ G +  AQ +F+++   + V W  +ISG   NG+
Sbjct: 566 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 625

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKA--SSCLTALEQGRQIHANLIKLDCSSDPFVG 631
            D A + +  M  +G +P+ + F   ++A   S  +  + G QIH  + K    SD  V 
Sbjct: 626 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 685

Query: 632 ISLVDMYAKC-GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             L+ MY  C  +  DA  +F ++ +RN++ WN+++   ++ G+      LF  M+  G+
Sbjct: 686 NVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGL 745

Query: 691 ----EPDSVTFIGVLS-ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
               +P+  TF  +++ ACS         E      EK G   ++   S LV    R G 
Sbjct: 746 GFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGL 805

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           T +A  +   M      SM+  ++G  + Q   E    V  ++  L   +S +YV+L + 
Sbjct: 806 TDDAKNIFEQMGVRNVVSMNGLMVGLVK-QKQGEAAAKVFHEMKDLVGINSDSYVVLLSA 864

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPD 854
           F+  +  ++      E+    ++    D   A   GL+    + G + D
Sbjct: 865 FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 913



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 8/240 (3%)

Query: 33   SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
            S S ++  FL+        S   + +IL    S S   +    HA +L      D  + N
Sbjct: 1043 SVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 1102

Query: 93   NLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
             L++ Y +CG +    ++F +M + RD +SWNS+++ Y H+     E + +   L   + 
Sbjct: 1103 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN-----ELLHKAMDLVWFMM 1157

Query: 152  ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
            +        T A +L  C S   +     VH   ++  +  D  V  ALV++YSK G+I 
Sbjct: 1158 QKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRID 1217

Query: 212  EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
             A   F+ M  R+V  W  M+  YA +G GE+   LF  +   G  PD   V  +LGV+S
Sbjct: 1218 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD--HVAPLLGVLS 1275



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 128/329 (38%), Gaps = 34/329 (10%)

Query: 41   FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
            FL+     S  S+    S L    S   ++LG+  H   L      D  ++N L+ +Y+ 
Sbjct: 949  FLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAE 1008

Query: 101  CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
             G      ++F  MP+ D +SWNS++ A + S      +V++  + F  +       SR+
Sbjct: 1009 TGCFTECLKVFSLMPEYDQVSWNSVIGALSDS----EASVSQAVKYFLEMMRGGWGLSRV 1064

Query: 161  TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            T   +L    S      S  +H   LK  L  D  +  AL++ Y K G++ E + +F  M
Sbjct: 1065 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 1124

Query: 221  QE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG----- 274
             E RD V W  M+  Y  N    +   L   + + G   D  +   VL   + +      
Sbjct: 1125 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG 1184

Query: 275  -KRHEEQVQA-----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQV 310
             + H   ++A                       YA +        NV  WN  +SGY + 
Sbjct: 1185 MEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARH 1244

Query: 311  GDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
            G    A++ F  M+      D V  L+ +
Sbjct: 1245 GHGEKALKLFTRMMLDGQPPDHVAPLLGV 1273


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 261/842 (30%), Positives = 406/842 (48%), Gaps = 149/842 (17%)

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQV 281
           R    W   LR+   +    E    ++++  SG  PD+ +   VL  +S L   +  EQ+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 282 QAYAIKL-----------LLYN------------------NNSNVVLWNKKLSGYLQVGD 312
            A A+K             L N                   + + V WN  ++   +   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 313 NHGAIECFVNMIRSNVQYDSVTFL-VALAA--VAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
              A+E F  M   N++  S T + VALA   +     L LG+Q+HG +L+ G       
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233

Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
            N+L+ MY+K+G V                                            G+
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEA 445
             D  T+ASVL A S L E L + K+IH + ++N D + +SFV +AL+D+YC    +   
Sbjct: 294 ELDGVTIASVLPACSHL-ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGC 504
             +F++  G  +  WNAMI GY  +    KAL LF  M   +G   +  T+A+ + AC  
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
                  + +H YA+K GF+ D  V + ++DMY + G M  +++IF+ +   D V+W TM
Sbjct: 413 CEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTM 472

Query: 565 ISGCVDNGEEDLALSIYHQM-RLSGVV----------------PDEFTFAILVKASSCLT 607
           I+G V +G    AL + H+M R+                    P+  T   ++   + L 
Sbjct: 473 ITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALA 532

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A+ +G++IHA  I+   +SD  VG +LVDMYAKCG +  +  +F +M  +N + WN +++
Sbjct: 533 AIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIM 592

Query: 668 GLAQHGNGEETLKLFEDMKAHG-----VEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
               HG GEE L+LF++M A        +P+ VTFI V +ACS++GL+SE    F+ M+ 
Sbjct: 593 ACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKH 652

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE-ASASMHRALLGACRVQGDTETG 781
            +G+EP  +HY+ +VD LGRAG+ +EA EL+ +MP E        +LLGACR+  + E G
Sbjct: 653 DHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELG 712

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------- 831
           +  A+ L+ LEP  +S YVLLSNI+++A  W+     R  M++  VKK+P          
Sbjct: 713 EVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDE 772

Query: 832 -------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                        ++ +   +E L +++++ GYVPDT  VL +V+E+EKE  L  HSEKL
Sbjct: 773 VHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKL 832

Query: 879 ARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRDGMCPC 915
           A A+G+++TPP + I   K     N                       RFHH ++G C C
Sbjct: 833 AIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSC 892

Query: 916 AD 917
            D
Sbjct: 893 GD 894



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 127/577 (22%), Positives = 239/577 (41%), Gaps = 133/577 (23%)

Query: 57  FSILRHAISTSDL------LLGKSTHARILNSSQIPDR--FLTNNLMTMYSRCGSLVYAR 108
           F+++  A++ S+L       LGK  H   L   ++ D+  F  N LM MY++ G +  ++
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSL---RVGDQKTFTNNALMAMYAKLGRVDDSK 251

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            LF+   DRD++SWN+++++++ S     +  +E    FR +         +T+A +L  
Sbjct: 252 ALFESFVDRDMVSWNTMISSFSQS-----DRFSEALAFFRLMVLEGVELDGVTIASVLPA 306

Query: 169 CLSSGYVWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           C     +   + +H Y L+   L+ + FV  ALV++Y    ++   + +FD +  R + L
Sbjct: 307 CSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIEL 366

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDESVQCVL-GVISDLGKRHEEQVQAYA 285
           W  M+  YA NG  E+   LF+++ + +GL P+  ++  V+   +      ++E +  YA
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426

Query: 286 IKLLL----YNNNS------------------------NVVLWNKKLSGYLQVGDNHGAI 317
           +KL      Y  N+                        + V WN  ++GY+  G    A+
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNAL 486

Query: 318 ECFVNMIR-----------------SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
                M R                    + +++T +  L   A    +  G++IH   ++
Sbjct: 487 VLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIR 546

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           +   S + VG++L++MY+K GC                        L+LS+++       
Sbjct: 547 NMLASDITVGSALVDMYAKCGC------------------------LNLSRRV------- 575

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                                       F      ++ TWN +I    +     +ALELF
Sbjct: 576 ----------------------------FNEMPNKNVITWNVLIMACGMHGKGEEALELF 607

Query: 481 SHMHTSGER-----LDEITIATAVKACGCLLMLKQGKQMHAYAMK--SGFELDLCVSSGI 533
            +M     R      +E+T  T   AC    ++ +G  +  Y MK   G E      + +
Sbjct: 608 KNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-YRMKHDHGVEPTSDHYACV 666

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDV--AWTTMISGC 568
           +D+  + G + +A  + N +PA  D   AW++++  C
Sbjct: 667 VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 703



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 174/408 (42%), Gaps = 84/408 (20%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF------------------ 89
           S S S++ W   LR    ++D     ST+  +  S   PD F                  
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 90  ------------------LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
                             + N L+ MY +CG +    ++FD++ DRD +SWNS +AA   
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA---SETVHGYALKI 188
                 E   +    FR+++      S  TL  +   C + G +      + +HGY+L++
Sbjct: 172 -----FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRV 226

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G     F + AL+ +Y+K G++ ++K LF+   +RD+V W  M+ +++++    E    F
Sbjct: 227 G-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF 285

Query: 249 VDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK--------------LL 289
             +   G+  D  ++  VL   S     D+GK    ++ AY ++              + 
Sbjct: 286 RLMVLEGVELDGVTIASVLPACSHLERLDVGK----EIHAYVLRNNDLIENSFVGSALVD 341

Query: 290 LYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSV 333
           +Y N                  + LWN  +SGY + G +  A+  F+ MI+ + +  ++ 
Sbjct: 342 MYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTT 401

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           T    + A    +  +  + IHG  +K GF     V N+L++MYS+MG
Sbjct: 402 TMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMG 449



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 1/158 (0%)

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
           P+    +W   +     + +   A+S Y +M +SG  PD F F  ++KA S L  L+ G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 614 QIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           QIHA  +K    SS   V  +LV+MY KCG I D   +F ++  R+ V WN+ +  L + 
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
              E+ L+ F  M+   +E  S T + V  ACS  G++
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 244/798 (30%), Positives = 385/798 (48%), Gaps = 108/798 (13%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C SS   +A +       +  + W+  + G     Y+  G +  A+ LFD M ERDVV W
Sbjct: 52  CKSSKMNYAFKVFDRMPQRDVISWNTLIFG-----YAGIGNMGFAQSLFDSMPERDVVSW 106

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----GVISDLGKRHEEQVQAY 284
             +L  Y  NG   +   +FV + RS   P D +   V+      I D G     QV   
Sbjct: 107 NSLLSCYLHNGVNRKSIEIFVRM-RSLKIPHDYATFAVILKACSGIEDYGLGL--QVHCL 163

Query: 285 AIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGDNHGA 316
           AI++   N+                              N+V W+  ++GY+Q       
Sbjct: 164 AIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEG 223

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           ++ F +M++  +     T+     + AG     LG Q+HG  LKS F    I+G + ++M
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283

Query: 377 YSKM----------------------GCVCG---------------------LRTDQFTL 393
           Y+K                         + G                     L  D+ +L
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           +  L A S +   L    Q+H  A+K     +  V+  ++D+Y + G++ EA  +FE  +
Sbjct: 344 SGALTACSVIKRHLE-GIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME 402

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D  +WNA+I  +  +    K L LF  M  S    D+ T  + VKAC     L  G +
Sbjct: 403 RRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTE 462

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   +KSG  LD  V S ++DMY KCG +++A+ I   +     V+W ++ISG     +
Sbjct: 463 IHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQ 522

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            + A   + QM   G++PD +T+A ++   + +  +E G+QIHA ++KL   SD ++  +
Sbjct: 523 SENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAST 582

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           LVDMY+KCGN++D+ ++F++   R+ V W+AM+   A HG GE+ + LFE+M+   V+P+
Sbjct: 583 LVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPN 642

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
              FI VL AC++ G V +    F  M   YG++P++EHYS +VD LGR+G+  EA +LI
Sbjct: 643 HTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLI 702

Query: 754 LSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWD 813
            SMPFEA   + R LL  C++QG+ E  +     L+ L+P DSSAYVLL+N++A    W 
Sbjct: 703 ESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWG 762

Query: 814 DVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGG 850
           +V   R  MK   +KK+P                       ++ I+ +   L+  +K  G
Sbjct: 763 EVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAG 822

Query: 851 YVPDTDFVLLDVEEEEKE 868
           YVPD DF +LD E EE++
Sbjct: 823 YVPDIDF-MLDEEMEEQD 839



 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 187/644 (29%), Positives = 297/644 (46%), Gaps = 86/644 (13%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T +LT + +L+ C +   +   + VH   +  G V   +V+  L+  Y K  K+  A  +
Sbjct: 4   TKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKV 63

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD M +RDV+ W  ++  YA  G G                         +G    L   
Sbjct: 64  FDRMPQRDVISWNTLIFGYA--GIGN------------------------MGFAQSLFDS 97

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
             E+               +VV WN  LS YL  G N  +IE FV M    + +D  TF 
Sbjct: 98  MPER---------------DVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFA 142

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM---------------- 380
           V L A +G ++  LG Q+H   ++ GF + V+ G++L++MYSK                 
Sbjct: 143 VILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPER 202

Query: 381 GCVC---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQI 413
             VC                           G+   Q T ASV R+ + L     L  Q+
Sbjct: 203 NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGL-SAFKLGTQL 261

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H HA+K+D   DS + TA +D+Y +   M +A  +F         ++NA+I GY   +  
Sbjct: 262 HGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQG 321

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KAL++F  +  +    DEI+++ A+ AC  +    +G Q+H  A+K G   ++CV++ I
Sbjct: 322 LKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTI 381

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LDMY KCGA+++A  IF ++   D V+W  +I+    N E    LS++  M  S + PD+
Sbjct: 382 LDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT+  +VKA +   AL  G +IH  +IK     D FVG +LVDMY KCG + +A  +  +
Sbjct: 442 FTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHAR 501

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ + TV WN+++ G +     E   + F  M   G+ PD+ T+  VL  C+    + E 
Sbjct: 502 LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATI-EL 560

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +  H    K  +  +V   S LVD   + G  +++  +    P
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 194/783 (24%), Positives = 337/783 (43%), Gaps = 127/783 (16%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+   +   L  GK  H +++ +  +P  ++ N L+  Y +   + YA ++FD+MP RD
Sbjct: 12  ILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRD 71

Query: 119 LISWNSILAAYAHSGEGNAENVTEGF--RLFRSL---------------------RESIT 155
           +ISWN+++  YA  G GN      GF   LF S+                     R+SI 
Sbjct: 72  VISWNTLIFGYA--GIGNM-----GFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 156 FTSRL----------TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
              R+          T A +LK C           VH  A+++G   D     ALV++YS
Sbjct: 125 IFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL--------- 256
           K  K+ +A  +F  M ER++V W  ++  Y +N    E   LF D+ + G+         
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 257 ---------------------CPDDESVQCVLGVIS-DLGKRHEEQVQAYAIKLLLYNNN 294
                                   D +   ++G  + D+  + E    A+ +   L N  
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
                +N  + GY +      A++ F ++ R+N+ +D ++   AL A +       G Q+
Sbjct: 305 RQS--YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGC-------------------------------- 382
           HG  +K G    + V N++++MY K G                                 
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422

Query: 383 -------VCGLRT----DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                  V  LR+    D FT  SV++A +   + L+   +IH   IK+    D FV +A
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAG-QQALNYGTEIHGRIIKSGMGLDWFVGSA 481

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y + G + EAE +    +     +WN++I G+     S  A   FS M   G   D
Sbjct: 482 LVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPD 541

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             T AT +  C  +  ++ GKQ+HA  +K     D+ ++S ++DMY KCG M D++ +F 
Sbjct: 542 NYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFE 601

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
             P  D V W+ MI     +G  + A++++ +M+L  V P+   F  +++A + +  +++
Sbjct: 602 KAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDK 661

Query: 612 GRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLV 667
           G      ++    LD   + +    +VD+  + G + +A  L + M    + V+W  +L 
Sbjct: 662 GLHYFQKMLSHYGLDPQMEHYS--CMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLS 719

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMRE-KYG 725
                GN E   K F  +    ++P DS  ++ + +  +  G+  E  +   +M+  K  
Sbjct: 720 NCKMQGNVEVAEKAFNSLLQ--LDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLK 777

Query: 726 IEP 728
            EP
Sbjct: 778 KEP 780



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++       L  G   H RI+ S    D F+ + L+ MY +CG L+ A ++  ++ ++
Sbjct: 446 SVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEK 505

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             +SWNSI++ +  S +  +EN     R F  + E        T A +L +C +   +  
Sbjct: 506 TTVSWNSIISGF--SSQKQSENAQ---RYFSQMLEMGIIPDNYTYATVLDVCANMATIEL 560

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H   LK+ L  D +++  LV++YSK G +++++ +F+   +RD V W  M+ AYA 
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G GE+  +LF ++    + P+      VL   + +G
Sbjct: 621 HGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMG 657


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 245/781 (31%), Positives = 378/781 (48%), Gaps = 124/781 (15%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVS-GALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           CL   Y+  S+    + +  G+   + VS  A++  Y+  G I  A+ LFD M ERDVV 
Sbjct: 82  CLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVS 141

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY--- 284
           W  ++  Y  NG   +V  +F+ + R G   D  +   VL   S L + H   +Q +   
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSL-EDHGGGIQIHGLA 200

Query: 285 ---------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
                                      +I+        N V W+  ++G +Q  D  G +
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           E F  M ++ V     TF     + AG   L LG Q+HG  LK+ F + V++G + ++MY
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMY 320

Query: 378 SKMGCVC-----------------------------GLRTDQFTLASVLRASSSLP---E 405
            K   +                              GL  D+ +L+   RA + +    E
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLE 380

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
           GL    Q+H  ++K+   ++  V+ A++D+Y + G++ EA  +FE     D  +WNA+I 
Sbjct: 381 GL----QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 436

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            +  + N  K L LF                                 +H   +KS   L
Sbjct: 437 AHEQNGNEEKTLSLF---------------------------------IHNRIIKSRLGL 463

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D  V   ++DMY KCG M  A+ + + +     V+W  +ISG     + + A   + +M 
Sbjct: 464 DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML 523

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
             GV PD FT+A ++   + L  +E G+QIHA +IK +  SD ++  +LVDMY+KCGN++
Sbjct: 524 EMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQ 583

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           D  ++F++   R+ V WNAM+ G AQHG GEE LK+FE M+   V+P+  TF+ VL AC 
Sbjct: 584 DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACG 643

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           + GLV +    FH M   YG++P++EHYS +VD +GR+G+  +A ELI  MPFEA A + 
Sbjct: 644 HMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIW 703

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
           R LL  C++ G+ E  +  A  ++ LEP DS+AYVLLSNI+A A  W++VT  R  M+  
Sbjct: 704 RTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFN 763

Query: 826 NVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
            +KK+P                       +  I+  ++ L   +K  GY+PDTDF+L D 
Sbjct: 764 GLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDD 823

Query: 863 E 863
           E
Sbjct: 824 E 824



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 219/808 (27%), Positives = 365/808 (45%), Gaps = 84/808 (10%)

Query: 12  RHKHTYVIFSSF-TKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS-ILRHAISTSDL 69
           RH      F +F +K  ++ LP     + PF   S + ++ +  + FS I +       L
Sbjct: 7   RHLFPIRFFFNFQSKSPFKTLP-----ISPF---SSYQATPTKKKTFSHIFQECSDRKAL 58

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             GK  HAR++ +   P  F+TN L+ MY +C  L +A ++FD MP RD +SWN++L  Y
Sbjct: 59  CPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGY 118

Query: 130 AHSGE-GNAENVTEG-------------------------FRLFRSLRESITFTSRLTLA 163
           A  G+ G A+ + +                            +F  +    T   R T A
Sbjct: 119 AGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFA 178

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            +LK C S         +HG A+K+G   D     AL+++Y+K  K+  +   F  M E+
Sbjct: 179 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK 238

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQ 282
           + V W  ++    +N        LF ++ ++G+     +   V    + L   R   Q+ 
Sbjct: 239 NWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLH 298

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ------------- 329
            +A+K    +  ++VV+    L  Y++  +   A + F ++   N+Q             
Sbjct: 299 GHALKT---DFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355

Query: 330 ----YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
                D V+   A  A A       G Q+HG ++KS   S + V N++++MY K G +  
Sbjct: 356 KGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVE 415

Query: 386 --------LRTDQFTLASVLRA-SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                   +  D  +  +++ A   +  E   LS  IH   IK+    DSFV  ALID+Y
Sbjct: 416 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMY 475

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + G M +AE L +      + +WNA+I G+ L   S +A + FS M   G   D  T A
Sbjct: 476 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 535

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T +  C  L+ ++ GKQ+HA  +K   + D  +SS ++DMY KCG M D Q IF   P  
Sbjct: 536 TILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR 595

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V W  M+ G   +G  + AL I+  M+L  V P+  TF  +++A   +  +E+G    
Sbjct: 596 DFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYF 655

Query: 617 ANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
            +++    LD   + +  +  VD+  + G +  A  L + M    + V+W  +L     H
Sbjct: 656 HSMLSNYGLDPQLEHYSCV--VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIH 713

Query: 673 GNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYE-----NFHLMREKYG- 725
           GN E   K    +    +EP DS  ++ + +  +  G+ +E  +      F+ ++++ G 
Sbjct: 714 GNVEVAEKAAYSILQ--LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGC 771

Query: 726 --IEPEVEHYSFLVDALGRAGRTKEAGE 751
             IE + E ++FLV       R+KE  E
Sbjct: 772 SWIEIKSEVHAFLVGDKAHP-RSKEIYE 798


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 254/888 (28%), Positives = 421/888 (47%), Gaps = 117/888 (13%)

Query: 110  LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
            LFD+M DR   +W + ++     G        + F + R +RE     S   LA L+  C
Sbjct: 299  LFDEMADRTPSTWYTAVSGCVRCGSHG-----KAFEMLRGMREPGVPLSGFALASLVTAC 353

Query: 170  LSSGY---VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
               G    +     +H    + GL+ + ++  AL+++Y   G + +A+ LF  M ER+VV
Sbjct: 354  ERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVV 413

Query: 227  LWKVMLRAYAENGFGEEVFHLFVDLHRSG-------------LCPDDES----------- 262
             W  ++ A + NG+ EE    +  + R G             LC   E+           
Sbjct: 414  SWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQV 473

Query: 263  -----------VQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                          ++ +  +LG+ H+ +      KL       + + WN  +S Y   G
Sbjct: 474  IVSGLQNQVSVANSLITMFGNLGRVHDAE------KLFDRMEEHDTISWNAMISMYSHQG 527

Query: 312  DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
                    F +M    ++ D+ T    ++  A +D+ + G  IH   L+S   S+V V N
Sbjct: 528  ICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVIN 587

Query: 372  SLINMYSKMGCVC--------------------------------GLRT----------- 388
            +L+NMYS  G +                                  L+T           
Sbjct: 588  ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESP 647

Query: 389  DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
            +  T +S L A SS P  L   K +H   ++     +  V  +LI +Y +  SM +AE +
Sbjct: 648  NHLTFSSALGACSS-PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKV 706

Query: 449  FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            F++    D+ ++N +I GY +  +  KA+++FS M ++G + + IT+     +      L
Sbjct: 707  FQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDL 766

Query: 509  KQ-GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
               G+ +HAY +++GF  D  V++ ++ MY KCG +  + +IFN I   + V+W  +I+ 
Sbjct: 767  HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 826

Query: 568  CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
             V  G  + AL ++  M+ +G   D    A  + + + L +LE+G Q+H   +K    SD
Sbjct: 827  NVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSD 886

Query: 628  PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +V  + +DMY KCG +++   +     +R    WN ++ G A++G  +E  + F+ M A
Sbjct: 887  SYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVA 946

Query: 688  HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             G +PD VTF+ +LSACS+ GLV +  + ++ M   +G+ P ++H   +VD LGR GR  
Sbjct: 947  TGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFA 1006

Query: 748  EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
            EA + I  MP   +  + R+LL + R   + E G+  A+KL+ L+PFD SAYVLLSN++A
Sbjct: 1007 EAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYA 1066

Query: 808  AANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIK 844
               +W DV   R  MK  N+ K P                       A+ I+AK++ ++ 
Sbjct: 1067 TNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLL 1126

Query: 845  RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
            +++E GY+ DT   L D +EE+KE+ L+ HSEKLA AYGLI  P  S 
Sbjct: 1127 KLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGST 1174



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 158/687 (22%), Positives = 300/687 (43%), Gaps = 84/687 (12%)

Query: 72   GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            G + HA    +  + + ++   L+ +Y   G +  A+RLF +MP+R+++SW +++ A + 
Sbjct: 365  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 424

Query: 132  SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            +G      + E  R +R +R      +    A ++ LC S         V    +  GL 
Sbjct: 425  NGY-----LEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 479

Query: 192  WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
                V+ +L+ ++   G++ +A+ LFD M+E D + W  M+  Y+  G   + F +F D+
Sbjct: 480  NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 539

Query: 252  HRSGLCPD----------------------------DESVQCVLGVISDLGKRHEEQVQA 283
               GL PD                              S+   + VI+ L   +    + 
Sbjct: 540  RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 599

Query: 284  YAIKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               + L +N +  +++ WN  +S Y+Q  ++  A++    +  +N   + +TF  AL A 
Sbjct: 600  SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 659

Query: 343  AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
            +    L  G+ +H   L+      ++VGNSLI MY K   +                   
Sbjct: 660  SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYN 719

Query: 384  ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                     G++ +  T+ ++  + +S  +  +  + +H + I+
Sbjct: 720  VLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIR 779

Query: 420  NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               ++D +V+ +LI +Y + G++  +  +F +    ++ +WNA+I   +   +  +AL+L
Sbjct: 780  TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKL 839

Query: 480  FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
            F  M  +G +LD + +A  + +C  L  L++G Q+H   MKSG + D  V +  +DMY K
Sbjct: 840  FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGK 899

Query: 540  CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
            CG M +   +  D        W T+ISG    G    A   + QM  +G  PD  TF  L
Sbjct: 900  CGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVAL 959

Query: 600  VKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD-M 656
            + A S    +++G   + N +       P +   + +VD+  + G   +A    ++M  +
Sbjct: 960  LSACSHAGLVDKGIDYY-NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVL 1018

Query: 657  RNTVLWNAMLVGLAQHGN---GEETLK 680
             N ++W ++L     H N   G +T K
Sbjct: 1019 PNDLIWRSLLSSSRTHKNLEIGRKTAK 1045



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 222/568 (39%), Gaps = 104/568 (18%)

Query: 35   SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
            S   L F    H      ++   S++    S+     G   H+  L SS      + N L
Sbjct: 530  SKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINAL 589

Query: 95   MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
            + MYS  G L  A  LF  M  RDLISWN+++++Y  +      N T+  +    L  + 
Sbjct: 590  VNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNC-----NSTDALKTLGQLFHTN 644

Query: 155  TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
               + LT +  L  C S G +   + VH   L++ L  +  V  +L+ +Y K   + +A+
Sbjct: 645  ESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAE 704

Query: 215  FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             +F  M   D+V + V++  YA    G +   +F  +  +G+ P+  ++  + G  +   
Sbjct: 705  KVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSN 764

Query: 275  KRHE--EQVQAYAIK-------------LLLYN---------------NNSNVVLWNKKL 304
              H     + AY I+             + +Y                 N N+V WN  +
Sbjct: 765  DLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAII 824

Query: 305  SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
            +  +Q+G    A++ F++M  +  + D V     L++ A   +L  G Q+HG  +KSG  
Sbjct: 825  AANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLD 884

Query: 365  SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
            S   V N+ ++MY K G     + D+                        +  + +  + 
Sbjct: 885  SDSYVVNAAMDMYGKCG-----KMDEM-----------------------LQVVPDQAIR 916

Query: 425  DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
                   LI  Y + G   EAE                               E F  M 
Sbjct: 917  PQQCWNTLISGYAKYGYFKEAE-------------------------------ETFKQMV 945

Query: 485  TSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVK 539
             +G + D +T    + AC    ++ +G   +     ++ +  G +  +C    I+D+  +
Sbjct: 946  ATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVC----IVDLLGR 1001

Query: 540  CGAMVDAQSIFNDIPA-PDDVAWTTMIS 566
             G   +A+    ++P  P+D+ W +++S
Sbjct: 1002 LGRFAEAEKFIEEMPVLPNDLIWRSLLS 1029



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 7/350 (2%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE---YLFENKDGFDLATWNAMIFGYIL 469
           IH  A++      +F    L+  Y R    + A    +LF+       +TW   + G + 
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKAC---GCLLMLKQGKQMHAYAMKSGFELD 526
             +  KA E+   M   G  L    +A+ V AC   G    +  G  +HA   ++G   +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           + + + +L +Y   G + DAQ +F ++P  + V+WT ++     NG  + AL  Y QMR 
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
            GV  +   FA +V     L     G Q+ + +I     +   V  SL+ M+   G + D
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  LF +M+  +T+ WNAM+   +  G   +   +F DM+ HG+ PD+ T   ++S C+ 
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           +   S      H +  +  ++  V   + LV+    AG+  +A  L  +M
Sbjct: 561 SDHFSHG-SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 609


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 325/595 (54%), Gaps = 48/595 (8%)

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           +  + + M  +M    G R D  TL SVL A +   + L   +++H  A++        V
Sbjct: 306 LAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD-AQALGACREVHAFAVRGGFDEQVNV 364

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           STA++DVYC+ G++  A  +F+     +  +WNAMI GY  + ++ +AL LF  M   G 
Sbjct: 365 STAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGV 424

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            + ++++  A+ ACG L  L +G+++H   ++ G E ++ V + ++ MY KC     A  
Sbjct: 425 DVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQ 484

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+++     V+W  MI GC  NG  + A+ ++ +M+L  V PD FT   ++ A + ++ 
Sbjct: 485 VFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISD 544

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
             Q R IH   I+L    D +V  +L+DMYAKCG +  A  LF     R+ + WNAM+ G
Sbjct: 545 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHG 604

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG+G+  ++LFE+MK+ G  P+  TF+ VLSACS+ GLV E  E F  M+E YG+EP
Sbjct: 605 YGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEP 664

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            +EHY  +VD LGRAG+  EA   I  MP E   S++ A+LGAC++  + E  +  A+++
Sbjct: 665 GMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRI 724

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------- 831
             LEP +   +VLL+NI+A A+ W DV   R  M++K ++K P                 
Sbjct: 725 FELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSG 784

Query: 832 ------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                 A  I+A++  LI+ IK  GYVPDTD +  DVE++ K + L  HSEKLA AYGLI
Sbjct: 785 STNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLI 843

Query: 886 STPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            T P + I                     ++ +E +  +  RFHH +DG C C D
Sbjct: 844 RTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGD 898



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 169/313 (53%), Gaps = 2/313 (0%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T  S+L+  ++  + L   + +H          ++  +TAL ++Y +     +A  +F+ 
Sbjct: 227 TFTSLLKLCAARAD-LATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDR 285

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCLLMLKQ 510
               D   WNA++ GY  +  +  A+ +   M    GER D +T+ + + AC     L  
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            +++HA+A++ GF+  + VS+ ILD+Y KCGA+  A+ +F+ +   + V+W  MI G  +
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAE 405

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           NG+   AL+++ +M   GV   + +    + A   L  L++GR++H  L+++   S+  V
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNV 465

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +L+ MY KC   + A  +F ++  +  V WNAM++G  Q+G+ E+ ++LF  M+   V
Sbjct: 466 MNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENV 525

Query: 691 EPDSVTFIGVLSA 703
           +PDS T + ++ A
Sbjct: 526 KPDSFTLVSIIPA 538



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 174/378 (46%), Gaps = 36/378 (9%)

Query: 37  SLLPFLQKSHFSSSSSSSQWF-SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           +L  F   S  S S    + F S+L+   + +DL  G++ HA++      P+      L 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
            MY++C     ARR+FD+MP RD ++WN+++A YA +G   A     G  + R   E   
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEA---AVGM-VVRMQEEDGE 323

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
               +TL  +L  C  +  + A   VH +A++ G      VS A++++Y K G +  A+ 
Sbjct: 324 RPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARK 383

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           +FDGMQ+R+ V W  M++ YAENG   E   LF  +   G+   D SV   L    +LG 
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443

Query: 276 RHE-EQVQAYAIKLLLYNNNSNV-----------------------------VLWNKKLS 305
             E  +V    +++ L  +N NV                             V WN  + 
Sbjct: 444 LDEGRRVHELLVRIGL-ESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMIL 502

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           G  Q G +  A+  F  M   NV+ DS T +  + A+A   +    + IHG +++     
Sbjct: 503 GCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQ 562

Query: 366 AVIVGNSLINMYSKMGCV 383
            V V  +LI+MY+K G V
Sbjct: 563 DVYVLTALIDMYAKCGRV 580



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 4/325 (1%)

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T  + +K C     L  G+ +HA     G   +   ++ + +MY KC    DA+ +F+ +
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQG 612
           PA D VAW  +++G   NG  + A+ +  +M+   G  PD  T   ++ A +   AL   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           R++HA  ++        V  +++D+Y KCG ++ A  +F  M  RN+V WNAM+ G A++
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+  E L LF+ M   GV+   V+ +  L AC   G + E     H +  + G+E  V  
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG-RRVHELLVRIGLESNVNV 465

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
            + L+    +  RT  A ++   + ++   S +  +LG C   G +E    +  + M LE
Sbjct: 466 MNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILG-CTQNGSSEDAVRLFSR-MQLE 523

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTS 817
                ++ L+S I A A+  D + +
Sbjct: 524 NVKPDSFTLVSIIPALADISDPLQA 548



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 198/445 (44%), Gaps = 55/445 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY-DSVTFLVALAAVAGTDNLNLGQQIHG 356
           V WN  ++GY + G    A+   V M   + +  D+VT +  L A A    L   +++H 
Sbjct: 292 VAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHA 351

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLR---------------------------TD 389
             ++ GF   V V  +++++Y K G V   R                           T+
Sbjct: 352 FAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATE 411

Query: 390 QFTL-------------ASVLRASSSLPE--GLHLSKQIHVHAIKNDTVADSFVSTALID 434
              L              SVL A  +  E   L   +++H   ++    ++  V  ALI 
Sbjct: 412 ALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALIT 471

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +YC+      A  +F+        +WNAMI G   + +S  A+ LFS M     + D  T
Sbjct: 472 MYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFT 531

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           + + + A   +    Q + +H Y+++   + D+ V + ++DMY KCG +  A+S+FN   
Sbjct: 532 LVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSAR 591

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               + W  MI G   +G   +A+ ++ +M+ SG VP+E TF  ++ A S    +++G++
Sbjct: 592 DRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651

Query: 615 IHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGL 669
             +++ K D   +P  G+    ++VD+  + G + +A+   ++M M   + ++ AML   
Sbjct: 652 YFSSM-KEDYGLEP--GMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGAC 708

Query: 670 AQHGN----GEETLKLFEDMKAHGV 690
             H N     E   ++FE     GV
Sbjct: 709 KLHKNVELAEESAQRIFELEPEEGV 733



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 135/294 (45%), Gaps = 36/294 (12%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-R 148
           ++  ++ +Y +CG++  AR++FD M DR+ +SWN+++  YA +G+      TE   LF R
Sbjct: 364 VSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDA-----TEALALFKR 418

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            + E +  T    LA L   C   G++     VH   ++IGL  +  V  AL+ +Y K  
Sbjct: 419 MVGEGVDVTDVSVLAAL-HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCK 477

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           +   A  +FD +  +  V W  M+    +NG  E+   LF  +    + PD  ++  ++ 
Sbjct: 478 RTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIP 537

Query: 269 VISDLGKRHEEQ-VQAYAIKL--------------------------LLYNN--NSNVVL 299
            ++D+    + + +  Y+I+L                           L+N+  + +V+ 
Sbjct: 538 ALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVIT 597

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           WN  + GY   G    A+E F  M  S    +  TFL  L+A +    ++ GQ+
Sbjct: 598 WNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 5/209 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  ++      +  + N L+TMY +C     A ++FD++  +  +SWN+++     
Sbjct: 447 GRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQ 506

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        +  RLF  ++         TL  ++           +  +HGY++++ L 
Sbjct: 507 NGSSE-----DAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLD 561

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  AL+++Y+K G++  A+ LF+  ++R V+ W  M+  Y  +G G+    LF ++
Sbjct: 562 QDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
             SG  P++ +   VL   S  G   E Q
Sbjct: 622 KSSGKVPNETTFLSVLSACSHAGLVDEGQ 650



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 2/185 (1%)

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           SG  P   TF  L+K  +    L  GR +HA L     S +     +L +MYAKC    D
Sbjct: 219 SGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD 278

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACS 705
           A  +F +M  R+ V WNA++ G A++G  E  + +   M+   G  PD+VT + VL AC+
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
               +    E  H    + G + +V   + ++D   + G    A ++   M    S S +
Sbjct: 339 DAQALGACRE-VHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWN 397

Query: 766 RALLG 770
             + G
Sbjct: 398 AMIKG 402



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 15/183 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SI+      SD L  +  H   +      D ++   L+ MY++CG +  AR LF+   DR
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR 593

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
            +I+WN+++  Y   G G          LF  ++ S    +  T   +L  C  +G V  
Sbjct: 594 HVITWNAMIHGYGSHGSGKV-----AVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDE 648

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVM 231
              + S     Y L+ G+  + +  G +V++  + GK+ EA  F+     E  + ++  M
Sbjct: 649 GQEYFSSMKEDYGLEPGM--EHY--GTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAM 704

Query: 232 LRA 234
           L A
Sbjct: 705 LGA 707


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 274/960 (28%), Positives = 439/960 (45%), Gaps = 147/960 (15%)

Query: 94   LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
            L+  +S+CG +  A  LF  M +RD++SWN+++  YA  G  +     + F +FRS+   
Sbjct: 133  LVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD-----DSFCMFRSMLRG 187

Query: 154  ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                   TL  +L+     G +  +  +HG   ++G    + V+G L+N Y+K G +R A
Sbjct: 188  GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSA 247

Query: 214  KFLFDGMQERDVVLWKVMLRAYAENGF---GEEVFHLFV------DLHRSGLCPDDESVQ 264
            K L  GM ++D+     ++  YA  G    G  +  ++       D  R+    ++++V 
Sbjct: 248  KDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVI 307

Query: 265  CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                +IS   K H     A+A  +     + N   W+  LSGY++VG    A+  F  M 
Sbjct: 308  SWTSLISGYAK-HGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW 366

Query: 325  RSNVQYDSVTFLVALAAVAGTDNL-NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
               V+ +       + A + +  + + G Q+HG  +K+G    V VG +L++ Y  +G V
Sbjct: 367  GLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLV 426

Query: 384  C-------------------------------------------GLRTDQFTLASVLRAS 400
                                                        G+  +Q T A+V  +S
Sbjct: 427  YNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV-TSS 485

Query: 401  SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
              L E   L  Q+  H I+        V+ +LI ++    S+ EA Y+F++ +  D+ +W
Sbjct: 486  CGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISW 545

Query: 461  NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            NAMI  Y       ++L  F  M       +  T+++ +  C  +  LK G+ +H   +K
Sbjct: 546  NAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK 605

Query: 521  SGFELDLCVSSGILDMYVKCGAMVDAQSIFN----------------------------- 551
             G + ++C+ + +L +Y + G   DA+ +F                              
Sbjct: 606  LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 665

Query: 552  -----DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
                  +  PD V W  +I G  +N E + A+  Y  +R  G+ P  +   + + A++ L
Sbjct: 666  LAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI-PANYITMVSLAATANL 724

Query: 607  TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
              LE+G+Q+H  +IKL   SD  V  + +DMY KCG + D   +  Q   R+ + WN ++
Sbjct: 725  AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 784

Query: 667  VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
               A+HG  ++  + F +M   G +PD VTF+ +LSAC++ GLV E    +  M  ++G+
Sbjct: 785  SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 844

Query: 727  EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
             P +EH   ++D LGR+GR   A   I  MP   +    R+LL ACR+ G+ E  +  AE
Sbjct: 845  FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAE 904

Query: 787  KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
             L+ L+P D SAYVL SN+ A + +W+DV + R EM   N+KK P               
Sbjct: 905  HLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG 964

Query: 832  --------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                    A  I AK+  L+K  KE GYVPDT F L D++EE+KE  L+ HSE+LA A+G
Sbjct: 965  MGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFG 1024

Query: 884  LISTPPSSV--ILSN------------------------KEPLYANRFHHLRDGMCPCAD 917
            LI+TP SS   I  N                        ++P    RFHH   G C C D
Sbjct: 1025 LINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPY---RFHHFSGGKCSCGD 1081



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 173/723 (23%), Positives = 314/723 (43%), Gaps = 100/723 (13%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S +  IL+  I       G   H  ++ +    D  L   L+  Y + G ++ AR +FD 
Sbjct: 31  SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG 90

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP+R ++SW ++++ Y+ +G        + F LF  +R      +               
Sbjct: 91  MPERSVVSWTAMVSGYSQNGR-----FEKAFVLFSDMRHCGVKANH-------------- 131

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
                                    ALV+ +SK GK+ +A +LF  M ERDVV W  M+ 
Sbjct: 132 -------------------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIG 166

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGK-- 275
            YA  GF ++ F +F  + R GL PD  ++  VL                G+I+ LG   
Sbjct: 167 GYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 226

Query: 276 ------------------RHEEQVQAYAIKLLLYNNNSNV---------VLWNKKLSGYL 308
                             R  + ++   +K  L+++ + +          + N  +  Y 
Sbjct: 227 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYA 286

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT--LKSGFYSA 366
           + G+   A   F  M   NV   S T L++  A  G  ++   + +           +S 
Sbjct: 287 KSGEIEDAKRAFDEMEEKNVI--SWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWST 344

Query: 367 VIVGNSLINMYSK-MGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           ++ G   + +Y + +G  C     G+  + F +AS++ A S          Q+H   +K 
Sbjct: 345 MLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT 404

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
             + D +V TAL+  Y   G +  A+ LFE     ++ +W +++ GY  S N  + L ++
Sbjct: 405 GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVY 464

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M   G   ++ T AT   +CG L     G Q+  + ++ GFE  + V++ ++ M+   
Sbjct: 465 QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSF 524

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
            ++ +A  +F+ +   D ++W  MIS    +G    +L  +H MR      +  T + L+
Sbjct: 525 SSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLL 584

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
              S +  L+ GR IH  ++KL   S+  +  +L+ +Y++ G  EDA ++F+ M  R+ +
Sbjct: 585 SVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLI 644

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WN+M+    Q G   + LK+  ++   G +PD VT+  ++   +     +EA + + L+
Sbjct: 645 SWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLI 703

Query: 721 REK 723
           REK
Sbjct: 704 REK 706



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 182/697 (26%), Positives = 322/697 (46%), Gaps = 45/697 (6%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L+LC+          +H + +  G   D  ++  L+  Y K G +  A+ +FDGM ER 
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           VV W  M+  Y++NG  E+ F LF D+   G+    ++   ++   S  GK  +    +Y
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGV----KANHALVDFHSKCGKMED---ASY 148

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
               ++     +VV WN  + GY   G    +   F +M+R  +  D  T    L A A 
Sbjct: 149 LFGTMM---ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAE 205

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG--------LRTDQFTLASV 396
              L +  QIHG   + G+ S  IV   LIN Y+K G +          L+ D F+  ++
Sbjct: 206 GGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTAL 265

Query: 397 LRASSSLPEGLHL--SKQIHVHAIKNDTVADSFVS------------TALIDVYCRN--G 440
           +   +   EG++   +  I ++A K+  + D+  +            T+LI  Y ++  G
Sbjct: 266 ITGYAH--EGIYTMGNALIDMYA-KSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYG 322

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            MA A Y+F+     + A+W+ M+ GY+      +A+ LF  M   G   +   +A+ + 
Sbjct: 323 HMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLIT 382

Query: 501 ACG-CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           AC     M  +G Q+H + +K+G   D+ V + ++  Y   G + +AQ +F ++P  + V
Sbjct: 383 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 442

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT+++ G  D+G     L++Y +MR  GV  ++ TFA +  +   L     G Q+  ++
Sbjct: 443 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 502

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+        V  SL+ M++   ++E+A  +F  M+  + + WNAM+   A HG   E+L
Sbjct: 503 IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESL 562

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           + F  M+    E +S T   +LS CS    +       H +  K G++  V   + L+  
Sbjct: 563 RCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG-RGIHGLVVKLGLDSNVCICNTLLTL 621

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ-GDTETGKWVAEKLMALEPFDSSA 798
              AGR+++A EL+     E       +++ AC VQ G    G  +  +L+ +   D   
Sbjct: 622 YSEAGRSEDA-ELVFQAMTERDLISWNSMM-ACYVQDGKCLDGLKILAELLQMGKPDRVT 679

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLI 835
           +  L    A   + ++   A   ++ K +   PA+ I
Sbjct: 680 WNALIGGHAENEEPNEAVKAYKLIREKGI---PANYI 713



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 180/795 (22%), Positives = 304/795 (38%), Gaps = 178/795 (22%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR +     L++    H  I          +T  L+  Y++ GSL  A+ L   M  +
Sbjct: 198 SVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKK 257

Query: 118 DLISWNSILAAYAHSG---EGNA--------ENVTEGFRLFRSLRES--ITFTSRLTLAP 164
           DL S  +++  YAH G    GNA          + +  R F  + E   I++TS      
Sbjct: 258 DLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTS------ 311

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
                L SGY       HGY                       G +  A+++FD M+ R+
Sbjct: 312 -----LISGY-----AKHGY-----------------------GHMAHARYVFDEMRHRN 338

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE--QVQ 282
              W  ML  Y   G  EE   LF  +   G+ P+   V  ++   S  G   +E  QV 
Sbjct: 339 EASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVH 398

Query: 283 AYAIKL--------------------LLYN--------NNSNVVLWNKKLSGYLQVGDNH 314
            + +K                     L+YN         + NVV W   + GY   G+  
Sbjct: 399 GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPG 458

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
             +  +  M +  V  +  TF    ++    ++  LG Q+ G  ++ GF  +V V NSLI
Sbjct: 459 EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLI 518

Query: 375 NMYSKMG--------------------------------CVCGLRTDQF----------T 392
           +M+S                                   C   LR   +          T
Sbjct: 519 SMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNST 578

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
             S L +  S  + L   + IH   +K    ++  +   L+ +Y   G   +AE +F+  
Sbjct: 579 TLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM 638

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHM-----------------HTSGERLDEITI 495
              DL +WN+M+  Y+        L++ + +                 H   E  +E   
Sbjct: 639 TERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVK 698

Query: 496 A----------------TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           A                 ++ A   L +L++G+Q+H   +K GFE DL V++  +DMY K
Sbjct: 699 AYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 758

Query: 540 CGAMVDAQSIFNDIPAPDD---VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           CG M D   +   +P P +   ++W  +IS    +G    A   +H+M   G  PD  TF
Sbjct: 759 CGEMHD---VLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTF 815

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFK 652
             L+ A +    +++G   + ++ +       F GI     ++D+  + G +  A    K
Sbjct: 816 VSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIK 872

Query: 653 QMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLV 710
           +M +  N + W ++L     HGN E   K  E +    ++P D   ++   + C+ +G  
Sbjct: 873 EMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE--LDPSDDSAYVLYSNVCATSG-- 928

Query: 711 SEAYENFHLMREKYG 725
              +E+   +R++ G
Sbjct: 929 --KWEDVENLRKEMG 941



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 55/288 (19%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL+L S   ++  RLD       ++ C      KQG  +H + + +GF  DL +++ ++
Sbjct: 16  EALKLLS---SNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
             YVK G ++ A+++F+ +P    V+WT M+SG   NG  + A  ++  MR  GV  +  
Sbjct: 73  IFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH- 131

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
                                                 +LVD ++KCG +EDA  LF  M
Sbjct: 132 --------------------------------------ALVDFHSKCGKMEDASYLFGTM 153

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             R+ V WNAM+ G A  G  +++  +F  M   G+ PD  T   VL A +  G      
Sbjct: 154 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGG------ 207

Query: 715 ENFHLMREKYGIEPEVEHYSF------LVDALGRAGRTKEAGELILSM 756
               +  + +GI  ++ + S+      L++A  + G  + A +L   M
Sbjct: 208 -GLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM 254



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 36/255 (14%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           SL  F    H  + ++S+   S+L    S  +L  G+  H  ++      +  + N L+T
Sbjct: 561 SLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLT 620

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE---------------------- 134
           +YS  G    A  +F  M +RDLISWNS++A Y   G+                      
Sbjct: 621 LYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTW 680

Query: 135 -----GNAEN-----VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
                G+AEN       + ++L R       + + ++LA    L +    +   + +HG 
Sbjct: 681 NALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAV----LEEGQQLHGL 736

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +K+G   D  V+ A +++Y K G++ +   +      R  + W +++ A+A +G  ++ 
Sbjct: 737 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKA 796

Query: 245 FHLFVDLHRSGLCPD 259
              F ++ + G  PD
Sbjct: 797 RETFHEMLKLGPKPD 811


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/714 (32%), Positives = 361/714 (50%), Gaps = 97/714 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +V  WN  +S Y+  G  H AI CF  ++  S ++ D  TF   L A      L  G++I
Sbjct: 181 DVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRI 237

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------ 384
           H    K GF   V V  SLI+MYS+ G                                 
Sbjct: 238 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 297

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G++ +  T+ S+L     L + +  +  IH++ IK+    D FVS A
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGD-ISTAMLIHLYVIKHGLEFDLFVSNA 356

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI++Y + G++ +A   F+     D+ +WN++I  Y  +++   A   F  M  +G + D
Sbjct: 357 LINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPD 416

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIF 550
            +T+ +           K  + +H + M+ G+ + D+ + + ++DMY K G +  A  +F
Sbjct: 417 LLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF 476

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTAL 609
             I   D ++W T+I+G   NG    A+ +Y  M     ++P++ T+  ++ A + + AL
Sbjct: 477 EIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 536

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           +QG +IH  +IK +   D FV   L+D+Y KCG + DA  LF Q+   ++V WNA++   
Sbjct: 537 QQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG+ E+TLKLF +M   GV+PD VTF+ +LSACS++G V E    F LM+E YGI+P 
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPS 655

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           ++HY  +VD LGRAG  + A   I  MP +  AS+  ALLGACR+ G+ E GK+ +++L 
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
            ++  +   YVLLSNI+A   +W+ V   R   + + +KK P                  
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 775

Query: 833 ------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I+ ++  L  ++K  GY+PD  FVL DVEE+EKE  L  HSE+LA A+G+IS
Sbjct: 776 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 835

Query: 887 TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           TPP S I                     ++ +E +   +NRFHH +DG+C C D
Sbjct: 836 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGD 889



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 259/588 (44%), Gaps = 83/588 (14%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S++     K  HA ++ + ++   F++  L+ +Y+  G +  +R  FD++P +D+ +WNS
Sbjct: 128 SSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNS 187

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +++AY H+G  + E +   ++L   L  S       T  P+LK C   G +     +H +
Sbjct: 188 MISAYVHNGHFH-EAIGCFYQL---LLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCW 240

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A K+G  W+ FV+ +L+++YS+FG    A+ LFD M  RD+  W  M+    +NG   + 
Sbjct: 241 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 300

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK----LLLYNNN----- 294
             +  ++   G+  +  +V  +L V   LG       +  Y IK      L+ +N     
Sbjct: 301 LDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360

Query: 295 -------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                              ++VV WN  ++ Y Q  D   A   FV M  +  Q D +T 
Sbjct: 361 YAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTL 420

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCV----------- 383
           +   + VA + +    + +HG  ++ G+    V++GN++++MY+K+G +           
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIL 480

Query: 384 ----------------CGLRTD-----------------QFTLASVLRASSSLPEGLHLS 410
                            GL ++                 Q T  S+L A + +   L   
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV-GALQQG 539

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            +IH   IK +   D FV+T LIDVY + G + +A  LF         TWNA+I  + + 
Sbjct: 540 MRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            ++ K L+LF  M   G + D +T  + + AC     +++GK       + G +  L   
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHY 659

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             ++D+  + G +  A     D+P  PD   W  ++  C  +G  +L 
Sbjct: 660 GCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELG 707



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 156/295 (52%), Gaps = 4/295 (1%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
            +K +H   +    V   F+ST L+++Y   G ++ +   F+     D+ TWN+MI  Y+
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 469 LSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            + + H+A+  F  +    E R D  T    +KACG L+    G+++H +A K GF+ ++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRRIHCWAFKLGFQWNV 250

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V++ ++ MY + G    A+S+F+D+P  D  +W  MISG + NG    AL +  +MRL 
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+  +  T   ++     L  +     IH  +IK     D FV  +L++MYAK GN+EDA
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
              F+QM + + V WN+++    Q+ +       F  M+ +G +PD +T + + S
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS 425



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 38/327 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL       D+      H  ++      D F++N L+ MY++ G+L  AR+ F +M   
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380

Query: 118 DLISWNSILAAYAHSGEGNAENVT-EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           D++SWNSI+AAY    E N + VT  GF  F  ++ +      LTL  L  +   S    
Sbjct: 381 DVVSWNSIIAAY----EQNDDPVTAHGF--FVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 177 ASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            S +VHG+ ++ G + ++ V G A+V++Y+K G +  A  +F+ +  +DV+ W  ++  Y
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494

Query: 236 AENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLGVISDLGKRHEEQ-------------- 280
           A+NG   E   ++  +     + P+  +   +L   + +G   +                
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLD 554

Query: 281 -------VQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                  +  Y        A+ L       + V WN  +S +   G     ++ F  M+ 
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQ 352
             V+ D VTF+  L+A + +  +  G+
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGK 641



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 14/184 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SIL        L  G   H R++ ++   D F+   L+ +Y +CG LV A  LF ++P
Sbjct: 523 WVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 582

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               ++WN+I++   H   G+AE      +LF  + +       +T   LL  C  SG+V
Sbjct: 583 QESSVTWNAIIS--CHGIHGHAEKT---LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 637

Query: 176 ----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKV 230
               W    +  Y +K  L       G +V++  + G +  A  F+ D   + D  +W  
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKH----YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGA 693

Query: 231 MLRA 234
           +L A
Sbjct: 694 LLGA 697


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 252/874 (28%), Positives = 410/874 (46%), Gaps = 125/874 (14%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LL LC++   +   + +H   LK  L    F++  L+++Y K G +++A  +FD M ER 
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQA 283
           +  W  M+ A+  +G   E   L+ ++   G+  D  +   VL     LG+ R   ++  
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 284 YAIK-------------LLLYNN-----------------NSNVVLWNKKLSGYLQVGDN 313
            A+K             + +Y                     + V WN  +S ++  G  
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M    V  ++ TF+ AL  V     + LG  IHG  LKS  ++ V V N+L
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289

Query: 374 INMYSKMG----------------------CVCGL---------------------RTDQ 390
           I MY+K G                       + GL                     + DQ
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            ++ +++ AS      L+  K++H +AI+N   ++  +   LID+Y +   +    Y FE
Sbjct: 350 VSVLNLIAASGRSGNLLN-GKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                DL +W  +I GY  +    +A+ LF  +   G  +D + I + ++AC  L     
Sbjct: 409 CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            +++H Y  K     D+ + + I+++Y + G    A+  F  I + D V+WT+MI+ CV 
Sbjct: 469 IREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVH 527

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           NG    AL +++ ++ + + PD       + A++ L++L++G++IH  LI+     +  +
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI 587

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             SLVDMYA CG +E++  +F  +  R+ +LW +M+     HG G E + LF+ M    V
Sbjct: 588 ASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENV 647

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            PD +TF+ +L ACS++GL+ E    F +M+  Y +EP  EHY+ +VD L R+   +EA 
Sbjct: 648 IPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAY 707

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           + + SMP + S+ +  ALLGAC +  + E G+  A++L+  +  +S  Y L+SNIFAA  
Sbjct: 708 QFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADG 767

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI- 846
           +W+DV   R  MK   +KK+P                        D I+ K+    K + 
Sbjct: 768 RWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLG 827

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----- 901
           K+GGY+  T FV  +V EEEK + LY HSE+LA  YGL+ TP  + I   K         
Sbjct: 828 KKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCH 887

Query: 902 ------------------ANRFHHLRDGMCPCAD 917
                             ANRFHH   G+C C D
Sbjct: 888 TFFKIASEVSQRALVVRDANRFHHFERGLCSCGD 921



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 192/726 (26%), Positives = 331/726 (45%), Gaps = 96/726 (13%)

Query: 32  PSF-SLSLL---PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           P+F SL+LL   P    S    + S      +L   ++   L  G+  HAR+L S     
Sbjct: 26  PAFQSLTLLSTHPLATPSRLEHAHSL-----LLDLCVAVKALPQGQQLHARLLKSHL--S 78

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            FL   L+ MY +CGSL  A ++FD+M +R + +WN+++ A+  SG+       E   L+
Sbjct: 79  AFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGK-----YLEAIELY 133

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           + +R         T   +LK C + G       +HG A+K G     FV  AL+ +Y K 
Sbjct: 134 KEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKC 193

Query: 208 GKIREAKFLFDG--MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           G +  A+ LFDG  M++ D V W  ++ A+   G   E   LF  +   G+  +  +   
Sbjct: 194 GDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVA 253

Query: 266 VLGVISD--------------LGKRHEEQVQAYAIKLLLYNNNSNV-------------- 297
            L  + D              L   H   V      + +Y     +              
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRD 313

Query: 298 -VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            V WN  LSG +Q      A+  F +M  S  + D V+ L  +AA   + NL  G+++H 
Sbjct: 314 YVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHA 373

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCV--------C------------------------ 384
             +++G  S + +GN+LI+MY+K  CV        C                        
Sbjct: 374 YAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLE 433

Query: 385 -----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      G+  D   + SVLRA S L +  +  ++IH +  K D +AD  +  A++
Sbjct: 434 AINLFRKVQVKGMDVDPMMIGSVLRACSGL-KSRNFIREIHGYVFKRD-LADIMLQNAIV 491

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           +VY   G    A   FE+    D+ +W +MI   + +    +ALELF  +  +  + D I
Sbjct: 492 NVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSI 551

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
            I +A+ A   L  LK+GK++H + ++ GF L+  ++S ++DMY  CG + +++ +F+ +
Sbjct: 552 AIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV 611

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D + WT+MI+    +G  + A++++ +M    V+PD  TF  L+ A S    + +G+
Sbjct: 612 KQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGK 671

Query: 614 QIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLA 670
           +    ++K     +P+      +VD+ ++  ++E+AY   + M ++ ++ +W A+L    
Sbjct: 672 RFF-EIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACH 730

Query: 671 QHGNGE 676
            H N E
Sbjct: 731 IHSNKE 736



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 137/600 (22%), Positives = 250/600 (41%), Gaps = 91/600 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK--MP 115
           S+L+   +  +  LG   H   +        F+ N L+ MY +CG L  AR LFD   M 
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
             D +SWNSI++A+   G+       E   LFR ++E    ++  T    L+      +V
Sbjct: 210 KEDTVSWNSIISAHVTEGK-----CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +HG ALK     D +V+ AL+ +Y+K G++ +A+ +F  M  RD V W  +L   
Sbjct: 265 KLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGL 324

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR----HEEQVQAYAIKLLLY 291
            +N    +  + F D+  S   PD  S   VL +I+  G+     + ++V AYAI+  L 
Sbjct: 325 VQNELYRDALNYFRDMQNSAQKPDQVS---VLNLIAASGRSGNLLNGKEVHAYAIRNGLD 381

Query: 292 NN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +N                              +++ W   ++GY Q   +  AI  F  +
Sbjct: 382 SNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKV 441

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-- 381
               +  D +     L A +G  + N  ++IHG   K    + +++ N+++N+Y ++G  
Sbjct: 442 QVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHR 500

Query: 382 ------------------------CV-----------------CGLRTDQFTLASVLRAS 400
                                   CV                   ++ D   + S L A+
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSAT 560

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           ++L   L   K+IH   I+     +  ++++L+D+Y   G++  +  +F +    DL  W
Sbjct: 561 ANL-SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILW 619

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            +MI    +    ++A+ LF  M       D IT    + AC    ++ +GK+     MK
Sbjct: 620 TSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEI-MK 678

Query: 521 SGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            G++L+      + ++D+  +  ++ +A      +P  P    W  ++  C  +  ++L 
Sbjct: 679 YGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELG 738



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 471 NNSHKALELFS-HMHTSGERLDE-----ITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
           N + ++L L S H   +  RL+      + +  AVKA      L QG+Q+HA  +KS   
Sbjct: 25  NPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKA------LPQGQQLHARLLKS--H 76

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           L   +++ +L MY KCG++ DA  +F+++       W  M+   V +G+   A+ +Y +M
Sbjct: 77  LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEM 136

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           R+ GV  D  TF  ++KA   L     G +IH   +K       FV  +L+ MY KCG++
Sbjct: 137 RVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDL 196

Query: 645 EDAYILFK--QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
             A +LF    M+  +TV WN+++      G   E L LF  M+  GV  ++ TF+  L 
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQ 256

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
                  V       H    K     +V   + L+    + GR ++A  +  SM
Sbjct: 257 GVEDPSFVKLGM-GIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM 309



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 5/156 (3%)

Query: 554 PAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           P P   ++  T+  G ++   + L L   H +     +  E   ++L+     + AL QG
Sbjct: 8   PLPLKSISVNTLNKGTLNPAFQSLTLLSTHPLATPSRL--EHAHSLLLDLCVAVKALPQG 65

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +Q+HA L+K   S+  F+   L+ MY KCG+++DA  +F +M  R    WNAM+      
Sbjct: 66  QQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSS 123

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           G   E ++L+++M+  GV  D+ TF  VL AC   G
Sbjct: 124 GKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG 159


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/607 (35%), Positives = 343/607 (56%), Gaps = 63/607 (10%)

Query: 373 LINMYSKMGC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           +I  ++++GC            + G   D+FT +SVL A + L   L L KQ+H   I+ 
Sbjct: 27  MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL-LALGKQLHSRVIRL 85

Query: 421 DTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-A 476
               D  V  +L+D+Y +   +GS+ ++  +FE     ++ +W A+I  Y  S    K A
Sbjct: 86  GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEA 145

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           +ELF  M +   R +  + ++ +KACG L     G+Q+++YA+K G     CV + ++ M
Sbjct: 146 IELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISM 205

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y + G M DA+  F+ +   + V++  ++ G   N + + A  +++++  +G+    FTF
Sbjct: 206 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 265

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           A L+  ++ + A+ +G QIH  L+K    S+  +  +L+ MY++CGNIE A+ +F +M+ 
Sbjct: 266 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED 325

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           RN + W +M+ G A+HG     L++F  M   G +P+ +T++ VLSACS+ G++SE  ++
Sbjct: 326 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKH 385

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F+ M +++GI P +EHY+ +VD LGR+G   EA E I SMP  A A + R LLGACRV G
Sbjct: 386 FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 445

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----- 831
           +TE G+  AE ++  EP D +AY+LLSN+ A+A QW DV   R  MK +N+ K+      
Sbjct: 446 NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 505

Query: 832 ------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                             A  I+ +++ L  +IKE GY+PDTDFVL D+EEE+KE+ L+ 
Sbjct: 506 EVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQ 565

Query: 874 HSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRD 910
           HSEK+A A+GLIST  S  I                      + +E +   +NRFHH+++
Sbjct: 566 HSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKN 625

Query: 911 GMCPCAD 917
           G+C C D
Sbjct: 626 GVCSCND 632



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 164/318 (51%), Gaps = 5/318 (1%)

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           A A  +F+     +L TW  MI  +     +  A++LF  M  SG   D  T ++ + AC
Sbjct: 7   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---GAMVDAQSIFNDIPAPDDV 559
             L +L  GKQ+H+  ++ G  LD+CV   ++DMY KC   G++ D++ +F  +P  + +
Sbjct: 67  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126

Query: 560 AWTTMISGCVDNGEEDL-ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           +WT +I+    +GE D  A+ ++ +M    + P+ F+F+ ++KA   L+    G Q+++ 
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +KL  +S   VG SL+ MYA+ G +EDA   F  +  +N V +NA++ G A++   EE 
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             LF ++   G+   + TF  +LS  +  G + +  E  H    K G +      + L+ 
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG-EQIHGRLLKGGYKSNQCICNALIS 305

Query: 739 ALGRAGRTKEAGELILSM 756
              R G  + A ++   M
Sbjct: 306 MYSRCGNIEAAFQVFNEM 323



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 217/514 (42%), Gaps = 103/514 (20%)

Query: 102 GSLVYAR--RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           GS+++A   ++FDKMP+R+L++W  ++  +A  G        +   LF  +  S     R
Sbjct: 2   GSVIWAPAYKVFDKMPERNLVTWTLMITRFAQLG-----CARDAIDLFLDMELSGYVPDR 56

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF---GKIREAKFL 216
            T + +L  C   G +   + +H   +++GL  D  V  +LV++Y+K    G + +++ +
Sbjct: 57  FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 116

Query: 217 FDGMQERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           F+ M E +V+ W  ++ AYA++G   +E   LF  +    + P+  S   VL    +L  
Sbjct: 117 FEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 176

Query: 276 RHE-EQVQAYAIKLLLYNNN----------------------------SNVVLWNKKLSG 306
            +  EQV +YA+KL + + N                             N+V +N  + G
Sbjct: 177 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 236

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y +   +  A   F  +  + +   + TF   L+  A    +  G+QIHG  LK G+ S 
Sbjct: 237 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 296

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
             + N+LI+MYS+    CG     F                          + N+    +
Sbjct: 297 QCICNALISMYSR----CGNIEAAFQ-------------------------VFNEMEDRN 327

Query: 427 FVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            +S T++I  + ++G    A  +F                        HK LE       
Sbjct: 328 VISWTSMITGFAKHGFATRALEMF------------------------HKMLE------- 356

Query: 486 SGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
           +G + +EIT    + AC  + M+ +G K  ++   + G    +   + ++D+  + G +V
Sbjct: 357 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 416

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +A    N +P   D + W T++  C  +G  +L 
Sbjct: 417 EAMEFINSMPLMADALVWRTLLGACRVHGNTELG 450



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 163/328 (49%), Gaps = 36/328 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC---GSLVYARRLFDKM 114
           S+L        L LGK  H+R++      D  +  +L+ MY++C   GS+  +R++F++M
Sbjct: 61  SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 120

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+ +++SW +I+ AYA SGE + E +     LF  +       +  + + +LK C +   
Sbjct: 121 PEHNVMSWTAIITAYAQSGECDKEAI----ELFCKMISGHIRPNHFSFSSVLKACGNLSD 176

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            +  E V+ YA+K+G+     V  +L+++Y++ G++ +A+  FD + E+++V +  ++  
Sbjct: 177 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 236

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------ 287
           YA+N   EE F LF ++  +G+     +   +L   + +G   + EQ+    +K      
Sbjct: 237 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 296

Query: 288 -------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                  + +Y+                + NV+ W   ++G+ + G    A+E F  M+ 
Sbjct: 297 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 356

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +  + + +T++  L+A +    ++ GQ+
Sbjct: 357 TGTKPNEITYVAVLSACSHVGMISEGQK 384



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 12/239 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HFS SS       +L+   + SD   G+  ++  +         + N+L++MY+R 
Sbjct: 157 IRPNHFSFSS-------VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 209

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G +  AR+ FD + +++L+S+N+I+  YA + +       E F LF  + ++    S  T
Sbjct: 210 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE-----EAFLLFNEIADTGIGISAFT 264

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    S G +   E +HG  LK G   ++ +  AL+++YS+ G I  A  +F+ M+
Sbjct: 265 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 324

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +R+V+ W  M+  +A++GF      +F  +  +G  P++ +   VL   S +G   E Q
Sbjct: 325 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 383


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 259/843 (30%), Positives = 407/843 (48%), Gaps = 123/843 (14%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+  G+  H  +  +      F    L+ MY++C  L  AR +FD   + D +SW +++A
Sbjct: 157 DVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIA 216

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y          V +GF +     E++    R+                          +
Sbjct: 217 GY----------VRDGFPM-----EAVKVFDRMQ-------------------------R 236

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G   D+     +VN Y   G++ +A+ LF  +   +VV W VM+  +A+ GF EE    
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN------------- 293
           F++L ++GL     S+  VL  I+ L    +   V A A K  L +N             
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            N+VLWN  L G+ Q G     +E F  M R   Q D  TF   
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSI 416

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
            +A A    LN G Q+H   +K+ F S + V N+L++MY+K G +               
Sbjct: 417 FSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN 476

Query: 384 ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G+  D+ +LAS++ A +++ E L   +Q H 
Sbjct: 477 VSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE-LKRGQQCHC 535

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             +K      +   ++LID+Y + G +  A  +F +    ++ + NA+I GY + +   +
Sbjct: 536 LLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGH-LEE 594

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF----ELDLCVSS 531
           A+ LF  +   G +  E+T A  +  C    ML  G+Q+H   MK GF    E+ +CVS 
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM-VCVS- 652

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            +L +Y+     VD++++F+++  P   V WT +ISG       + AL  Y  MR   ++
Sbjct: 653 -LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+  FA +++A + +++L+ G++IH+ +     + D     SL+DMYAKCG+++ +  +
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 651 FKQMDMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           F++M  RN V+ WN+M+VGLA++G  EE L++F+ M+   + PD VTF+GVLSACS+ G 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           VSE  + F LM   Y ++P V+H   +VD LGR G   EA E I  +  +A   +   LL
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLL 891

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR  GD   GK  A+KLM L+P  SS+YVLLS+I+A +  W    S R EMK K VKK
Sbjct: 892 GACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKK 951

Query: 830 DPA 832
            P 
Sbjct: 952 LPG 954



 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 206/748 (27%), Positives = 350/748 (46%), Gaps = 78/748 (10%)

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
            A+ST+     K  H++ L         L N ++ +Y +CG++ +A++ F ++  +D+ +
Sbjct: 55  QALSTA-----KVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFA 109

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-------TSRLTLAPLLKLCLSSGY 174
           WNS+L+ Y   G            LF ++ +S           +  T A +L  C     
Sbjct: 110 WNSVLSMYLDHG------------LFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQD 157

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V     VH    K G  +  F  G L+++Y+K   +R+A+ +FDG    D V W  ++  
Sbjct: 158 VNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAG 217

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +GF  E   +F  + R G  PD  ++  V+     LG+       A A KL     N
Sbjct: 218 YVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRL------ADARKLFTQIPN 271

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            NVV WN  +SG+ + G    AI  F+ + ++ ++    +    L+A+A    LN G  +
Sbjct: 272 PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV 331

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSK----------------------------------- 379
           H    K G    V VG++L+NMY+K                                   
Sbjct: 332 HAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA 391

Query: 380 ------MGCVC--GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                   C+   G + D+FT  S+  A +SL   L+   Q+H   IKN   ++ FV+ A
Sbjct: 392 QEVMEFFSCMKRHGPQPDEFTFTSIFSACASL-HYLNFGGQLHTVMIKNKFASNLFVANA 450

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y ++G++ EA   FE     D  +WNA+I GY+    + +A  +F  M ++G   D
Sbjct: 451 LVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E+++A+ V AC  +  LK+G+Q H   +K G +   C  S ++DMYVKCG ++ A+ +F 
Sbjct: 511 EVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P+ + V+   +I+G    G  + A+ ++ ++++ G+ P E TFA L+        L  
Sbjct: 571 SMPSRNVVSVNALIAG-YTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629

Query: 612 GRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGL 669
           GRQIH  ++K    SS   V +SL+ +Y       D+  LF ++   +  V+W A++ G 
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGY 689

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQ  + E+ L+ ++ M++  + PD   F  VL AC+    +    E  H +    G   +
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQE-IHSLIFHTGFNMD 748

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMP 757
               S L+D   + G  K + ++   MP
Sbjct: 749 EVTCSSLIDMYAKCGDVKGSLQVFREMP 776



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 302/681 (44%), Gaps = 103/681 (15%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R     ++S    L+K+   ++ SS    S+L    S S L  G   HA+        + 
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLG--SVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           ++ + L+ MY++C  +  A+++F+ + +R+++ WN++L  +A +G   A+ V E    F 
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL--AQEVME---FFS 399

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            ++         T   +   C S  Y+     +H   +K     + FV+ ALV++Y+K G
Sbjct: 400 CMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSG 459

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            ++EA+  F+ M+  D V W  ++  Y +  + +E F +F  +  +G+ PD+ S+  ++ 
Sbjct: 460 ALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519

Query: 269 VISDLGK-RHEEQVQAYAIKL---------------------------LLYNNNS-NVVL 299
             +++ + +  +Q     +K+                           + Y+  S NVV 
Sbjct: 520 ACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVS 579

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
            N  ++GY  +G    AI  F  +    ++   VTF   L    G   LNLG+QIHG  +
Sbjct: 580 VNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM 638

Query: 360 KSGFYSAV-IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           K GF S+  +V  SL+ +Y        + + +F  +  L +    P+GL           
Sbjct: 639 KWGFLSSSEMVCVSLLCLY--------MNSQRFVDSETLFSELQYPKGL----------- 679

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                                                    W A+I GY   N+  KAL+
Sbjct: 680 ---------------------------------------VVWTALISGYAQQNHHEKALQ 700

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            + HM +     D+   A+ ++AC  +  L+ G+++H+    +GF +D    S ++DMY 
Sbjct: 701 FYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYA 760

Query: 539 KCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           KCG +  +  +F ++P  ++V +W +MI G   NG  + AL I+ QM    ++PDE TF 
Sbjct: 761 KCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFL 820

Query: 598 ILVKASSCLTALEQGRQIH---ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            ++ A S    + +GR++     N  KL    D      +VD+  + G + +A     ++
Sbjct: 821 GVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLG--CMVDILGRWGFLNEAEEFINKL 878

Query: 655 DMR-NTVLWNAMLVGLAQHGN 674
             + + +LW+ +L    +HG+
Sbjct: 879 GCKADPMLWSTLLGACRKHGD 899



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 223/551 (40%), Gaps = 99/551 (17%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SI     S   L  G   H  ++ +    + F+ N L+ MY++ G+L  AR+ F+ M   
Sbjct: 415 SIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIH 474

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWN+I+  Y        E   E F +FR +  +      ++LA ++  C +   +  
Sbjct: 475 DNVSWNAIIVGYVQE-----EYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKR 529

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            +  H   +K+GL        +L+++Y K G +  A+ +F  M  R+VV    ++  Y  
Sbjct: 530 GQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM 589

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL-----GVISDLGKRHEEQVQAYAIK----- 287
            G  EE  HLF ++   GL P + +   +L       + +LG++   QV  +        
Sbjct: 590 -GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM 648

Query: 288 -----LLLYNNNSN----------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                L LY N+                  +V+W   +SGY Q   +  A++ + +M   
Sbjct: 649 VCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSD 708

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           N+  D   F   L A AG  +L  GQ+IH     +GF    +  +SLI+MY+K G V G 
Sbjct: 709 NILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKG- 767

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                     L+    +P              +N+ ++      ++I    +NG   EA 
Sbjct: 768 ---------SLQVFREMPR-------------RNNVIS----WNSMIVGLAKNGYAEEA- 800

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
                                         LE+F  M       DE+T    + AC    
Sbjct: 801 ------------------------------LEIFKQMEQQSIIPDEVTFLGVLSACSHAG 830

Query: 507 MLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTT 563
            + +G+++    M + ++L   V     ++D+  + G + +A+   N +    D + W+T
Sbjct: 831 RVSEGRKVFDL-MVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWST 889

Query: 564 MISGCVDNGEE 574
           ++  C  +G+E
Sbjct: 890 LLGACRKHGDE 900



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 11/328 (3%)

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L   K +H+ ++K G  L   + + I+D+YVKCG +  AQ  F+ +   D  AW ++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +S  +D+G     +  +  M    V P+EFTFA+++ A S L  +  GRQ+H  + K   
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
               F    L+DMYAKC  + DA ++F      +TV W A++ G  + G   E +K+F+ 
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G  PD +T + V++A    G +++A + F  +       P V  ++ ++    + G
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRG 288

Query: 745 RTKEAGELILSMP---FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV- 800
             +EA    L +     +A+ S   ++L A         G  V  +    E  D + YV 
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATK-EGLDDNVYVG 347

Query: 801 -LLSNIFAAANQWDDVTSARGEMKRKNV 827
             L N++A  ++ D        +  +N+
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNI 375



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%)

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
           K    L AL   + IH+  +K+       +G  +VD+Y KCGN++ A   F +++ ++  
Sbjct: 49  KPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            WN++L     HG     ++ F  M  H V P+  TF  VLSACS
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS 153


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 228/711 (32%), Positives = 364/711 (51%), Gaps = 89/711 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V  W + +  Y Q GD   A+  F  M   +V    VT++  L A A T++L  G +IH
Sbjct: 70  DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 129

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCG-----------------------LRTDQFT 392
           G  L+ GF   V VG +LINMY+K G V G                       ++ DQF 
Sbjct: 130 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 189

Query: 393 LASVLRASSSL----PEGL-------------HLSKQIHVHAIKNDTV--ADSFVSTALI 433
           LA  L     L    P  +             +LS+   ++++ +  V  +D  V  + +
Sbjct: 190 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAM 249

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           +++   G + +A  LFE+    D+ TWN +I  Y+ + N  +A+ LF  +   G + ++I
Sbjct: 250 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDI 309

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T    +     L  L +GK +H    ++G++ D+ V++ ++ +Y +C A   A  IF D+
Sbjct: 310 TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDM 369

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
            + D + WT M      NG    AL ++ +M+L G  P   T   ++   + L AL++GR
Sbjct: 370 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 429

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           QIH+++I+     +  V  +L++MY KCG + +A  +F++M  R+ ++WN+ML   AQHG
Sbjct: 430 QIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHG 489

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +ETL+LF  M+  G + D+V+F+ VLSA S++G V++ Y+ F  M + + I P  E Y
Sbjct: 490 YYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 549

Query: 734 SFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
             +VD LGRAGR +EA +++L +        +   LLGACR    T+  K  AE+++  +
Sbjct: 550 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 609

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
           P  S AYV+LSN++AAA  WD V   R  M+ + VKK+P                     
Sbjct: 610 PSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSH 669

Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
                I+A+++ L   ++  GY+PDT  +L DVE+E KE  L+YHSE+LA A+GL+STPP
Sbjct: 670 PRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPP 729

Query: 890 SSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            + +                     L  +E L    +RFH+ +DG C C D
Sbjct: 730 GTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKD 780



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 135/606 (22%), Positives = 257/606 (42%), Gaps = 89/606 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+   S  ++  G+  H  + +     +  +  +L+ MY++CGS+  A+++F+ +  +
Sbjct: 10  ALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERK 69

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ +W  ++  Y   G+ +         +F  ++E     +++T   +L  C S+  +  
Sbjct: 70  DVFAWTRMIGIYCQQGDYD-----RALGMFYQMQEEDVMPTKVTYVAILNACASTESLKD 124

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +HG  L+ G   D FV  AL+N+Y+K G +R A   F  ++ RDVV W  M+ A  +
Sbjct: 125 GMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQ 184

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--------------GKRHEEQVQA 283
           +        L+  +   G+ P+  ++  V     D                +  E  V+ 
Sbjct: 185 HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRV 244

Query: 284 YAIKLLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               + ++ N               + +VV WN  ++ Y+Q  +   A+  F  + +  +
Sbjct: 245 MNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGI 304

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------- 379
           + + +TF++ L       +L  G+ IH    ++G+   V+V  +L+++Y +         
Sbjct: 305 KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWK 364

Query: 380 ----MG----------CVC--------------------GLRTDQFTLASVLRASSSLPE 405
               MG          CV                     G R    TL +VL   + L  
Sbjct: 365 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLA- 423

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   +QIH H I+N    +  V TALI++Y + G MAEA  +FE     D+  WN+M+ 
Sbjct: 424 ALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLG 483

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMK 520
            Y       + L+LF+ M   GE+ D ++  + + A      +  G Q     +  +++ 
Sbjct: 484 AYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSIT 543

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA--PDDVAWTTMISGCVDNGEEDLAL 578
              EL  CV    +D+  + G + +A  I   +    PD + W T++  C  + + D A 
Sbjct: 544 PTPELYGCV----VDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 599

Query: 579 SIYHQM 584
           +   Q+
Sbjct: 600 AAAEQV 605



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 1/258 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           ++ C     +  G+++H +    GFE +  V   ++ MY +CG++ +AQ +F  +   D 
Sbjct: 12  LQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDV 71

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            AWT MI      G+ D AL +++QM+   V+P + T+  ++ A +   +L+ G +IH  
Sbjct: 72  FAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQ 131

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           +++     D FVG +L++MY KCG++  A+  FK+++ R+ V W AM+    QH      
Sbjct: 132 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 191

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             L+  M+  GV P+ +T   V +A      +SE    + L+  +  +E +V   +  ++
Sbjct: 192 RWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV-MESDVRVMNSAMN 250

Query: 739 ALGRAGRTKEAGELILSM 756
             G AG   +A  L   M
Sbjct: 251 MFGNAGLLGDARRLFEDM 268



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 182/438 (41%), Gaps = 49/438 (11%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           +  +L  F Q        +   + +IL    ST  L  G   H +IL      D F+   
Sbjct: 87  YDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTA 146

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY++CGS+  A   F ++  RD++SW +++AA         +       L+R ++  
Sbjct: 147 LINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH-----DQFALARWLYRRMQLD 201

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               +++TL  +        Y+   + ++       +  D  V  + +N++   G + +A
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDA 261

Query: 214 KFLFDGMQERDVVLWKVMLRAYAEN-GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           + LF+ M +RDVV W +++  Y +N  FGE V  LF  L + G+  +D +   +L V + 
Sbjct: 262 RRLFEDMVDRDVVTWNIVITFYVQNENFGEAV-RLFGRLQQDGIKANDITFVLMLNVYTS 320

Query: 273 L-----GKRHEEQVQ------------------------AYAIKLLLYNNNSNVVLWNKK 303
           L     GK   E V+                          A K+ +   + +V+ W   
Sbjct: 321 LTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVM 380

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
              Y Q G    A++ F  M     +  S T +  L   A    L  G+QIH   +++GF
Sbjct: 381 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGF 440

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRT--------DQFTLASVLRASSS---LPEGLHLSKQ 412
              ++V  +LINMY K G +   R+        D     S+L A +      E L L  Q
Sbjct: 441 RMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQ 500

Query: 413 IHVHAIKNDTVADSFVST 430
           + +   K D V  SFVS 
Sbjct: 501 MQLDGEKADAV--SFVSV 516



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 2/198 (1%)

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD   F  L++  S    ++ GR++H ++       +  V   L+ MYA+CG++ +A  +
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F+ ++ ++   W  M+    Q G+ +  L +F  M+   V P  VT++ +L+AC+ T  +
Sbjct: 63  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            +  E  H    + G E +V   + L++   + G  + A +    +      S   A++ 
Sbjct: 123 KDGME-IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSW-TAMIA 180

Query: 771 ACRVQGDTETGKWVAEKL 788
           AC         +W+  ++
Sbjct: 181 ACVQHDQFALARWLYRRM 198



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S+   ++L      + L  G+  H+ I+ +    +  +   L+ MY +CG +  AR +F
Sbjct: 408 TSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVF 467

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           +KM  RD++ WNS+L AYA  G  +     E  +LF  ++        ++   +L     
Sbjct: 468 EKMAKRDILVWNSMLGAYAQHGYYD-----ETLQLFNQMQLDGEKADAVSFVSVLSALSH 522

Query: 172 SGYVWASETVHGYALKIGLVWDEFVS------GALVNIYSKFGKIREAKFLFDGMQE--R 223
           SG V       GY   + ++ D  ++      G +V++  + G+I+EA  +   +     
Sbjct: 523 SGSV-----TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 577

Query: 224 DVVLWKVMLRA 234
           D +LW  +L A
Sbjct: 578 DGILWMTLLGA 588


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/607 (35%), Positives = 343/607 (56%), Gaps = 63/607 (10%)

Query: 373 LINMYSKMGC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           +I  ++++GC            + G   D+FT +SVL A + L   L L KQ+H   I+ 
Sbjct: 22  MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL-LALGKQLHSRVIRL 80

Query: 421 DTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-A 476
               D  V  +L+D+Y +   +GS+ ++  +FE     ++ +W A+I  Y  S    K A
Sbjct: 81  GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEA 140

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           +ELF  M +   R +  + ++ +KACG L     G+Q+++YA+K G     CV + ++ M
Sbjct: 141 IELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISM 200

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y + G M DA+  F+ +   + V++  ++ G   N + + A  +++++  +G+    FTF
Sbjct: 201 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 260

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           A L+  ++ + A+ +G QIH  L+K    S+  +  +L+ MY++CGNIE A+ +F +M+ 
Sbjct: 261 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED 320

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           RN + W +M+ G A+HG     L++F  M   G +P+ +T++ VLSACS+ G++SE  ++
Sbjct: 321 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKH 380

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F+ M +++GI P +EHY+ +VD LGR+G   EA E I SMP  A A + R LLGACRV G
Sbjct: 381 FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 440

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----- 831
           +TE G+  AE ++  EP D +AY+LLSN+ A+A QW DV   R  MK +N+ K+      
Sbjct: 441 NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 500

Query: 832 ------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                             A  I+ +++ L  +IKE GY+PDTDFVL D+EEE+KE+ L+ 
Sbjct: 501 EVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQ 560

Query: 874 HSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRD 910
           HSEK+A A+GLIST  S  I                      + +E +   +NRFHH+++
Sbjct: 561 HSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKN 620

Query: 911 GMCPCAD 917
           G+C C D
Sbjct: 621 GVCSCND 627



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 164/318 (51%), Gaps = 5/318 (1%)

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           A A  +F+     +L TW  MI  +     +  A++LF  M  SG   D  T ++ + AC
Sbjct: 2   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---GAMVDAQSIFNDIPAPDDV 559
             L +L  GKQ+H+  ++ G  LD+CV   ++DMY KC   G++ D++ +F  +P  + +
Sbjct: 62  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121

Query: 560 AWTTMISGCVDNGEEDL-ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           +WT +I+    +GE D  A+ ++ +M    + P+ F+F+ ++KA   L+    G Q+++ 
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +KL  +S   VG SL+ MYA+ G +EDA   F  +  +N V +NA++ G A++   EE 
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             LF ++   G+   + TF  +LS  +  G + +  E  H    K G +      + L+ 
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG-EQIHGRLLKGGYKSNQCICNALIS 300

Query: 739 ALGRAGRTKEAGELILSM 756
              R G  + A ++   M
Sbjct: 301 MYSRCGNIEAAFQVFNEM 318



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/507 (22%), Positives = 212/507 (41%), Gaps = 101/507 (19%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           A ++FDKMP+R+L++W  ++  +A  G        +   LF  +  S     R T + +L
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLG-----CARDAIDLFLDMELSGYVPDRFTYSSVL 58

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF---GKIREAKFLFDGMQER 223
             C   G +   + +H   +++GL  D  V  +LV++Y+K    G + +++ +F+ M E 
Sbjct: 59  SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 118

Query: 224 DVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQV 281
           +V+ W  ++ AYA++G   +E   LF  +    + P+  S   VL    +L   +  EQV
Sbjct: 119 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 178

Query: 282 QAYAIKLLLYNNN----------------------------SNVVLWNKKLSGYLQVGDN 313
            +YA+KL + + N                             N+V +N  + GY +   +
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A   F  +  + +   + TF   L+  A    +  G+QIHG  LK G+ S   + N+L
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TAL 432
           I+MYS+    CG     F                          + N+    + +S T++
Sbjct: 299 ISMYSR----CGNIEAAFQ-------------------------VFNEMEDRNVISWTSM 329

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I  + ++G    A  +F                        HK LE       +G + +E
Sbjct: 330 ITGFAKHGFATRALEMF------------------------HKMLE-------TGTKPNE 358

Query: 493 ITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           IT    + AC  + M+ +G K  ++   + G    +   + ++D+  + G +V+A    N
Sbjct: 359 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 418

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLA 577
            +P   D + W T++  C  +G  +L 
Sbjct: 419 SMPLMADALVWRTLLGACRVHGNTELG 445



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 163/328 (49%), Gaps = 36/328 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC---GSLVYARRLFDKM 114
           S+L        L LGK  H+R++      D  +  +L+ MY++C   GS+  +R++F++M
Sbjct: 56  SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 115

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+ +++SW +I+ AYA SGE + E +     LF  +       +  + + +LK C +   
Sbjct: 116 PEHNVMSWTAIITAYAQSGECDKEAI----ELFCKMISGHIRPNHFSFSSVLKACGNLSD 171

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            +  E V+ YA+K+G+     V  +L+++Y++ G++ +A+  FD + E+++V +  ++  
Sbjct: 172 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 231

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------ 287
           YA+N   EE F LF ++  +G+     +   +L   + +G   + EQ+    +K      
Sbjct: 232 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 291

Query: 288 -------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                  + +Y+                + NV+ W   ++G+ + G    A+E F  M+ 
Sbjct: 292 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 351

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +  + + +T++  L+A +    ++ GQ+
Sbjct: 352 TGTKPNEITYVAVLSACSHVGMISEGQK 379



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 12/239 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HFS SS       +L+   + SD   G+  ++  +         + N+L++MY+R 
Sbjct: 152 IRPNHFSFSS-------VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 204

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G +  AR+ FD + +++L+S+N+I+  YA + +       E F LF  + ++    S  T
Sbjct: 205 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE-----EAFLLFNEIADTGIGISAFT 259

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    S G +   E +HG  LK G   ++ +  AL+++YS+ G I  A  +F+ M+
Sbjct: 260 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 319

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +R+V+ W  M+  +A++GF      +F  +  +G  P++ +   VL   S +G   E Q
Sbjct: 320 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 378


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/779 (31%), Positives = 396/779 (50%), Gaps = 85/779 (10%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLF--DGMQERDVVLWKVMLRAYAE--NGFGEEVFHLF 248
           + F    +++ YS+ G++  A  LF       RD V W VM+ A+A        +   LF
Sbjct: 65  NAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLF 124

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA----YAIKLLLYNNNSNVVLWNKKL 304
            D+ R G+ PD  +V  VL +    G      + A    +A+KL L +  SNVV+ N  L
Sbjct: 125 RDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLH--SNVVVCNTLL 182

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
             Y +    HG +     + +     DSVT+          + + +G    G+  ++   
Sbjct: 183 DAYCK----HGLLAAARRVFQEMPHRDSVTY----------NAMMMGCSKEGSHAEA--- 225

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
                    +++++ M    GL   +FT ++VL  ++ + + L L +Q+H   +   T +
Sbjct: 226 ---------LDLFAAMR-RKGLAATRFTFSTVLTVATGVGD-LCLGRQVH-GLVARATSS 273

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           + FV+ +L+D Y +   + E + LF      D  ++N MI GY  +  +   L LF  M 
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQ 333

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
           +       +  A+ +   G +  +  GKQ+HA  +  G   +  V + ++DMY KCG + 
Sbjct: 334 SLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLD 393

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A++ F +      V+WT MI+GCV NG+++ AL ++  MR +G+ PD  TF+  +KASS
Sbjct: 394 AAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASS 453

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L  +  GRQ+H+ LI+    S  F G +L+DMY KCG +++A   F +M  RN++ WNA
Sbjct: 454 NLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNA 513

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           ++   A +G  +  +K+FE M  +G +PDSVTF+ VLSACS+ GL  E  + F LM  +Y
Sbjct: 514 VISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEY 573

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV 784
           GI P  EHYS ++D LGR GR  +  E++  MPFE    +  ++L +CR  G+ +  +  
Sbjct: 574 GISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVA 633

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK--------------- 829
           AEKL ++   D++ YV+LSNIFA A +W+D    +  M+ + ++K               
Sbjct: 634 AEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYS 693

Query: 830 ----DPADLIFAKV----EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
               D  + +  ++    E L K + + GY PDT   L  V+++ K  +L YHSE+LA A
Sbjct: 694 FSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIA 753

Query: 882 YGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           + LI+TPP + I                     + N++ +   ++RFHH +DG C C D
Sbjct: 754 FALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGD 812



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 272/609 (44%), Gaps = 103/609 (16%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDR---FLTNNLMTMYSRCGSLVYARRLFDK 113
            ++L H++ +S    G+   AR L   Q+P R   F  N +++ YSR G L  A  LF  
Sbjct: 37  LNLLLHSLISS----GRLAQARAL-FDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLS 91

Query: 114 MPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
            P   RD ++W  ++ A+A +    A +    FR    LRE +    R+T+A +L L  +
Sbjct: 92  SPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDM--LREGVA-PDRVTVATVLNLPPA 148

Query: 172 SGYVWAS---ETVHGYALKIGLVWDEFV-SGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           SG   A+    ++H +ALK+GL+    V    L++ Y K G +  A+ +F  M  RD V 
Sbjct: 149 SGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVT 208

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----RHEEQVQA 283
           +  M+   ++ G   E   LF  + R GL     +   VL V + +G     R    + A
Sbjct: 209 YNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVA 268

Query: 284 YAIKLLLYNNNSNVVLWN--------KKLSGYLQVGDN---------HGAIECFVNMIRS 326
            A    ++ NNS +  ++        KKL   +   DN         +    C   ++R 
Sbjct: 269 RATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRL 328

Query: 327 NVQYDSVTF------LVALAAVAGT-DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
             +  S++F        +L +VAG+  ++ +G+QIH   +  G  S  +VGN+LI+MYSK
Sbjct: 329 FREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSK 388

Query: 380 --------------------------MGCV------------CGLR-----TDQFTLASV 396
                                      GCV            CG+R      D+ T +S 
Sbjct: 389 CGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSST 448

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           ++ASS+L   + L +Q+H + I++  ++  F  +AL+D+Y + G + EA   F+     +
Sbjct: 449 IKASSNLAM-IGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERN 507

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG-------CLLMLK 509
             +WNA+I  Y     +  A+++F  M   G + D +T  + + AC        C+   +
Sbjct: 508 SISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFE 567

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGC 568
             +  + Y +    E   CV    +D   + G     Q +  ++P  DD + W++++  C
Sbjct: 568 LME--YEYGISPWKEHYSCV----IDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSC 621

Query: 569 VDNGEEDLA 577
             +G +DLA
Sbjct: 622 RTHGNQDLA 630



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 5/244 (2%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           S+ L  F +    S    +  + S+L  A S   + +GK  HA+++      +  + N L
Sbjct: 323 SIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNAL 382

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MYS+CG L  A+  F    D+  +SW +++     +G+       E  +LF  +R + 
Sbjct: 383 IDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQE-----EALQLFCGMRRAG 437

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
               R T +  +K   +   +     +H Y ++ G +   F   AL+++Y+K G + EA 
Sbjct: 438 LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEAL 497

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             FD M ER+ + W  ++ AYA  G  +    +F  +   G  PD  +   VL   S  G
Sbjct: 498 QTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNG 557

Query: 275 KRHE 278
              E
Sbjct: 558 LAEE 561


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/713 (31%), Positives = 354/713 (49%), Gaps = 90/713 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           + N V +   + GY+Q       ++ F  + R   + +   F   L  +   +   L   
Sbjct: 3   DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +H    K G  S   VG +LI+ Y+  G V                              
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G   + FT A VL+A   L E   + K +H   +K     D +V  
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGL-EAFSVGKSVHGCVLKTCYEMDLYVGV 181

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            L+D+Y + G   +   +FE     D+  W+ MI  Y  SN S +A+ELF  M  +    
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           ++ T A+ +++C  +  L+ GKQ+H + +K G + ++ VS+ ++D+Y KCG + ++  +F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
            ++P  ++V W TMI G V +G+ D ALS+Y  M    V   E T++ +++A + L A+E
Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAME 361

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G QIH+  +K     D  VG +L+DMYAKCG+I++A ++F  +  R+ + WNAM+ G +
Sbjct: 362 LGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYS 421

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG   E LK F+ M+     P+ +TF+ +LSACS  GL+      F  M + YGIEP +
Sbjct: 422 MHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCM 481

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +V  LGR+G   +A +LI  +P E +  + RALLGAC +  D + G   A++++ 
Sbjct: 482 EHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQ 541

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           ++P D + +VLLSNI+A   +W+ V S R  MK K VKK+P                   
Sbjct: 542 IDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDT 601

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                 +I   +E L  + ++ GYVPD + VL DVE++EK+R L+ HSE+LA A+GLI T
Sbjct: 602 SHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRT 661

Query: 888 PP-----------------------SSVILSNKEPLYANRFHHLRDGMCPCAD 917
           P                        S ++  +      NRFHH +DG+C C D
Sbjct: 662 PSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGD 714



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 167/359 (46%), Gaps = 34/359 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +IL+  +S     L  S HA I       + F+   L+  Y+ CGS+  AR+ FD +  +
Sbjct: 46  TILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACK 105

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW  ++A YA +     +   +  +LF  +R      +  T A +LK C+       
Sbjct: 106 DMVSWTGMVACYAEN-----DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSV 160

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            ++VHG  LK     D +V   L+++Y+KFG   +   +F+ M + DV+ W  M+  YA+
Sbjct: 161 GKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQ 220

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQV----------- 281
           +    E   LF  + R+ + P+  +   VL   +      LGK+    V           
Sbjct: 221 SNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFV 280

Query: 282 -----QAYA--------IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                  YA        +KL +   N N V WN  + GY+Q GD   A+  + NM+   V
Sbjct: 281 SNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQV 340

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           Q   VT+   L A A    + LG QIH  +LK+ +   V+VGN+LI+MY+K G +   R
Sbjct: 341 QASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 236/561 (42%), Gaps = 83/561 (14%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MPDR+ +S+ +++  Y  S +     + E   LF  +       +      +LKL +S  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQ-----LDEVVDLFSRVHREGHELNPFVFTTILKLLVSVE 55

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
               + ++H    K+G   + FV  AL++ Y+  G +  A+  FD +  +D+V W  M+ 
Sbjct: 56  CAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVA 115

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKL 288
            YAEN   ++   LF ++   G  P+  +   VL     L     GK     V     ++
Sbjct: 116 CYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM 175

Query: 289 LLYNN------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            LY                            +V+ W+  +S Y Q   +  A+E F  M 
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           R+ V  +  TF   L + A  +NL LG+Q+H   LK G    V V N+L+++Y+K G + 
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLD 295

Query: 384 ------------------------------------------CGLRTDQFTLASVLRASS 401
                                                     C ++  + T +SVLRA +
Sbjct: 296 NSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACA 355

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           SL   + L  QIH  ++K     D  V  ALID+Y + GS+  A  +F+     D  +WN
Sbjct: 356 SLA-AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWN 414

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI GY +     +AL+ F  M  +    +++T  + + AC    +L  G Q +  +M  
Sbjct: 415 AMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG-QNYFKSMVQ 473

Query: 522 GFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLAL 578
            + ++ C+   + ++ +  + G +  A  +  +IP  P+   W  ++  CV + + DL +
Sbjct: 474 DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGI 533

Query: 579 SIYHQMRLSGVVPDEFTFAIL 599
               Q+ L     DE T  +L
Sbjct: 534 MSAQQI-LQIDPQDEATHVLL 553



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 148/323 (45%), Gaps = 34/323 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+  I      +GKS H  +L +    D ++   L+ +Y++ G      R+F++MP  D
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHD 207

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           +I W+ +++ YA S +       E   LF  +R +    ++ T A +L+ C S   +   
Sbjct: 208 VIPWSFMISRYAQSNQSR-----EAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLG 262

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + VH + LK+GL  + FVS AL+++Y+K G++  +  LF  +  R+ V W  M+  Y ++
Sbjct: 263 KQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQS 322

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN---- 293
           G G++   L+ ++    +   + +   VL   + L       Q+ + ++K +   +    
Sbjct: 323 GDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVG 382

Query: 294 --------------NSNVVL----------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                         N+ +V           WN  +SGY   G    A++ F  M  +   
Sbjct: 383 NALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442

Query: 330 YDSVTFLVALAAVAGTDNLNLGQ 352
            + +TF+  L+A +    L++GQ
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQ 465



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 81/152 (53%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + V++ T+I G V + + D  + ++ ++   G   + F F  ++K    +   E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
             +HA + KL   S+ FVG +L+D YA CG++  A   F  +  ++ V W  M+   A++
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
              +++L+LF +M+  G  P+  TF GVL AC
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKAC 152


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/797 (30%), Positives = 387/797 (48%), Gaps = 106/797 (13%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C SS   +A +       +  + W+  + G     Y++ G +  A+ LFD M ERDVV W
Sbjct: 52  CKSSNMNYAFKVFDRMPHRDVISWNTMIFG-----YAEIGNMGFAQSLFDTMPERDVVSW 106

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV---ISDLGKRHEEQVQAYA 285
             +L  Y  NG   +   +FV +    +  D  +   VL     I D G     QV   A
Sbjct: 107 NSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLG--LQVHCLA 164

Query: 286 IKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAI 317
           I++   N+                              N+V W+  ++GY+Q       +
Sbjct: 165 IQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGL 224

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           + F +M++  +     T+     + AG     LG Q+HG  LKS F    I+G + ++MY
Sbjct: 225 KLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMY 284

Query: 378 SKM----------------------GCVCG---------------------LRTDQFTLA 394
           +K                         + G                     L  D+ +L+
Sbjct: 285 AKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLS 344

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
             L A S +   L    Q+H  A+K     +  V+  ++D+Y + G++ EA  +F++ + 
Sbjct: 345 GALTACSVIKGHLE-GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            D  +WNA+I  +  +    K L LF  M  S    D+ T  + VKAC     L  G ++
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           H   +KSG  LD  V S ++DMY KCG +++A+ I + +     V+W ++ISG     + 
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQS 523

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           + A   + QM   GV+PD FT+A ++   + +  +E G+QIHA ++KL+  SD ++  +L
Sbjct: 524 ENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTL 583

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           VDMY+KCGN++D+ ++F++   R+ V W+AM+   A HG+GE+ +KLFE+M+   V+P+ 
Sbjct: 584 VDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNH 643

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
             FI VL AC++ G V +    F +M+  YG++P +EHYS +VD LGR+ +  EA +LI 
Sbjct: 644 TIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIE 703

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
           SM FEA   + R LL  C++QG+ E  +     L+ L+P DSSAYVLL+N++A    W +
Sbjct: 704 SMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGE 763

Query: 815 VTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGY 851
           V   R  MK   +KK+P                       ++ I+ +   L+  +K  GY
Sbjct: 764 VAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGY 823

Query: 852 VPDTDFVLLDVEEEEKE 868
           VPD D  +LD E EE++
Sbjct: 824 VPDID-SMLDEEVEEQD 839



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 188/644 (29%), Positives = 296/644 (45%), Gaps = 86/644 (13%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T + T + +L+ C +   +   +  H   +    V   +V+  LV  Y K   +  A  +
Sbjct: 4   TKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKV 63

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD M  RDV+ W  M+  YAE                                I ++G  
Sbjct: 64  FDRMPHRDVISWNTMIFGYAE--------------------------------IGNMG-- 89

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                  +A  L       +VV WN  LS YL  G N  +IE FV M    + +D  TF 
Sbjct: 90  -------FAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFS 142

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM---------------- 380
           V L A +G ++  LG Q+H   ++ GF + V+ G++L++MYSK                 
Sbjct: 143 VVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPER 202

Query: 381 GCVC---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQI 413
             VC                           G+   Q T ASV R+ + L     L  Q+
Sbjct: 203 NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGL-SAFKLGTQL 261

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H HA+K+D   DS + TA +D+Y +   M++A  +F         ++NA+I GY   +  
Sbjct: 262 HGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQG 321

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KALE+F  +  +    DEI+++ A+ AC  +    +G Q+H  A+K G   ++CV++ I
Sbjct: 322 LKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTI 381

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LDMY KCGA+V+A +IF+D+   D V+W  +I+    N E    LS++  M  S + PD+
Sbjct: 382 LDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT+  +VKA +   AL  G +IH  ++K     D FVG +LVDMY KCG + +A  +  +
Sbjct: 442 FTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDR 501

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ + TV WN+++ G +     E   + F  M   GV PD+ T+  VL  C+    + E 
Sbjct: 502 LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI-EL 560

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +  H    K  +  +V   S LVD   + G  +++  +    P
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP 604



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 193/779 (24%), Positives = 338/779 (43%), Gaps = 119/779 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR------------------ 100
           IL+   +   L  GK  HA+++ +S +P  ++ N L+  Y +                  
Sbjct: 12  ILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRD 71

Query: 101 -------------CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
                         G++ +A+ LFD MP+RD++SWNS+L+ Y H+G  N +++ E F   
Sbjct: 72  VISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGV-NRKSI-EIFVRM 129

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           RSL+    +    T + +LK C           VH  A+++G   D     ALV++YSK 
Sbjct: 130 RSLKIPHDYA---TFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            K+  A  +F  M ER++V W  ++  Y +N    E   LF D+ + G+     +   V 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 268 GVISDLGK-RHEEQVQAYAIK-------------LLLYNN---------------NSNVV 298
              + L   +   Q+  +A+K             L +Y                 N    
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            +N  + GY +      A+E F ++ R+ + +D ++   AL A +       G Q+HG  
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366

Query: 359 LKSGFYSAVIVGNSLINMYSKMGC------------------------------------ 382
           +K G    + V N++++MY K G                                     
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 383 ---VCGLRT----DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
              V  LR+    D FT  SV++A +   + L+   +IH   +K+    D FV +AL+D+
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAG-QQALNYGMEIHGRIVKSGMGLDWFVGSALVDM 485

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G + EAE + +  +     +WN++I G+     S  A   FS M   G   D  T 
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTY 545

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           AT +  C  +  ++ GKQ+HA  +K     D+ ++S ++DMY KCG M D++ +F   P 
Sbjct: 546 ATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPK 605

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR-- 613
            D V W+ MI     +G  + A+ ++ +M+L  V P+   F  +++A + +  +++G   
Sbjct: 606 RDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHY 665

Query: 614 -QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQ 671
            QI  +   LD   + +    +VD+  +   + +A  L + M    + V+W  +L     
Sbjct: 666 FQIMQSHYGLDPHMEHYS--CMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKM 723

Query: 672 HGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMRE-KYGIEP 728
            GN E   K F  +    ++P DS  ++ + +  +  G+  E  +   +M+  K   EP
Sbjct: 724 QGNVEVAEKAFNSLLQ--LDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEP 780



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/599 (23%), Positives = 264/599 (44%), Gaps = 87/599 (14%)

Query: 57  FSILRHAIS-TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FS++  A S   D  LG   H   +      D    + L+ MYS+C  L  A R+F +MP
Sbjct: 141 FSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMP 200

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +R+L+ W++++A Y  +     +   EG +LF+ + +     S+ T A + + C      
Sbjct: 201 ERNLVCWSAVIAGYVQN-----DRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAF 255

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +HG+ALK    +D  +  A +++Y+K  ++ +A  +F+ +       +  ++  Y
Sbjct: 256 KLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGY 315

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKL---LLYN 292
           A    G +   +F  L R+ L  D+ S+   L   S + K H E +Q + + +   L +N
Sbjct: 316 ARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVI-KGHLEGIQLHGLAVKCGLGFN 374

Query: 293 ---------------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         + V WN  ++ + Q  +    +  FV+M+R
Sbjct: 375 ICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLR 434

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
           S ++ D  T+   + A AG   LN G +IHG  +KSG      VG++L++MY K G +  
Sbjct: 435 STMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLME 494

Query: 384 -----------------------------------------CGLRTDQFTLASVLRASSS 402
                                                     G+  D FT A+VL   ++
Sbjct: 495 AEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCAN 554

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           +   + L KQIH   +K +  +D ++++ L+D+Y + G+M ++  +FE     D  TW+A
Sbjct: 555 MAT-IELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSA 613

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA-MKS 521
           MI  Y    +  +A++LF  M     + +     + ++AC  +  + +G  +H +  M+S
Sbjct: 614 MICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKG--LHYFQIMQS 671

Query: 522 GFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            + LD  +   S ++D+  +   + +A  +   +    DDV W T++S C   G  ++A
Sbjct: 672 HYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVA 730



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 175/405 (43%), Gaps = 49/405 (12%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHF-------------SSSSSSSQWFSILRHAIST 66
           F  F +   RNL  +S  +  ++Q   F                 S S + S+ R     
Sbjct: 193 FRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGL 252

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S   LG   H   L S    D  +    + MY++C  +  A ++F+ +P+    S+N+I+
Sbjct: 253 SAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAII 312

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-LSSGYVWASETVHGYA 185
             YA   +G      +   +F+SL+ +      ++L+  L  C +  G++   + +HG A
Sbjct: 313 VGYARQDQG-----LKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-LHGLA 366

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K GL ++  V+  ++++Y K G + EA  +FD M+ RD V W  ++ A+ +N    +  
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNSNV--- 297
            LFV + RS + PDD +   V+   +     + G     ++    + L  +  ++ V   
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMY 486

Query: 298 ---------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                V WN  +SG+     +  A   F  M+   V  D+ T+ 
Sbjct: 487 GKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYA 546

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             L   A    + LG+QIH   LK   +S V + ++L++MYSK G
Sbjct: 547 TVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCG 591


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 255/818 (31%), Positives = 405/818 (49%), Gaps = 88/818 (10%)

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKI 210
           S+        A  L+ C++ G       VHG+ ++ G V   D F +  L+N+Y K G +
Sbjct: 53  SVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPL 112

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
             A+ LFD M ER++V +  +++A+A+ G  E    LF  L   G     E  Q VL  +
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG----HEVNQFVLTTM 168

Query: 271 SDLGKRHEEQ-----VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
             L    +       V + A KL    ++ N  + +  +  Y        A   F  ++R
Sbjct: 169 LKLAIAMDAAGLAGGVHSCAWKL---GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVR 225

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
                D+V +   ++                       YS      +   ++SKM  V G
Sbjct: 226 K----DAVVWTAMVSC----------------------YSENDCPENAFRVFSKMR-VSG 258

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + + F L SVL+A+  LP  + L K IH  AIK     +  V  AL+D+Y + G + +A
Sbjct: 259 CKPNPFALTSVLKAAVCLPSVV-LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              FE     D+   + MI  Y  SN + +A ELF  +  S    +E ++++ ++AC  +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           + L  GKQ+H +A+K G E DL V + ++D Y KC  M  +  IF+ +   ++V+W T++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   +G  + ALS++ +M+ + +   + T++ +++A +   ++    QIH ++ K   +
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +D  +G SL+D YAKCG I DA  +F+ +  R+ + WNA++ G A HG   + L+LF+ M
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
               VE + +TF+ +LS CS TGLV+     F  MR  +GI+P +EHY+ +V  LGRAGR
Sbjct: 558 NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGR 617

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             +A + I  +P   SA + RALL +C +  +   G++ AEK++ +EP D + YVLLSN+
Sbjct: 618 LNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNM 677

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +AAA   D V   R  M+   V+K P                         +I A +E L
Sbjct: 678 YAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWL 737

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------- 893
             +    GY+PD + VL DV++E+K R L+ HSE+LA AYGL+ TPP   I         
Sbjct: 738 NLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSC 797

Query: 894 ------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                       +  +E +    NRFHH  DG C C D
Sbjct: 798 LDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGD 835



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 172/709 (24%), Positives = 311/709 (43%), Gaps = 117/709 (16%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQW-------------------FSILRH---AISTSD 68
           LP+ S  + P   +  F++ +++ QW                   F+  R     I+  D
Sbjct: 17  LPTLSCPVAP--HRRGFAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGD 74

Query: 69  LLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
              G++ H  ++    +   D F  N L+ MY + G L  ARRLFD+MP+R+++S+ +++
Sbjct: 75  ARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLV 134

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            A+A  G+  A        LFR LR      ++  L  +LKL ++      +  VH  A 
Sbjct: 135 QAHAQRGDFEAAAA-----LFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K+G   + FV   L++ YS    + +A+ +F+G+  +D V+W  M+  Y+EN   E  F 
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR 249

Query: 247 LFVDLHRSGLCPDDESVQCVL-------------------------------GVISDL-G 274
           +F  +  SG  P+  ++  VL                               G + D+  
Sbjct: 250 VFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYA 309

Query: 275 KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           K  + +    A +++ Y+   +V+L +  +S Y Q   N  A E F+ ++RS+V  +  +
Sbjct: 310 KCGDIKDARLAFEMIPYD---DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 366

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------- 379
               L A      L+ G+QIH   +K G  S + VGN+L++ Y+K               
Sbjct: 367 LSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426

Query: 380 -----------------------MGCVCGLRT-----DQFTLASVLRASSSLPEGLHLSK 411
                                  +   C ++       Q T +SVLRA +S     H + 
Sbjct: 427 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH-AG 485

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           QIH    K+    D+ +  +LID Y + G + +A  +F++    D+ +WNA+I GY L  
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVS 530
            +  ALELF  M+ S    ++IT    +  C    ++  G  +  +  +  G +  +   
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHY 605

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           + I+ +  + G + DA     DIP AP  + W  ++S C+ +  +++AL  +   ++  +
Sbjct: 606 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEI 663

Query: 590 VP-DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
            P DE T+ +L    +   +L+Q   +  ++  +     P  G+S V++
Sbjct: 664 EPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP--GLSWVEI 710



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 18  VIFSSFTKDTY----RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGK 73
           VI  SF    Y    +N  +F L  L  ++ S   +  S S   S+L+   +   L  GK
Sbjct: 329 VILLSFMISRYAQSNQNEQAFEL-FLRLMRSSVLPNEYSLS---SVLQACTNMVQLDFGK 384

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
             H   +      D F+ N LM  Y++C  +  + ++F  + D + +SWN+I+  ++ SG
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSG 444

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
            G      E   +F  ++ +    +++T + +L+ C S+  +  +  +H    K     D
Sbjct: 445 LGE-----EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 499

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             +  +L++ Y+K G IR+A  +F  + ERD++ W  ++  YA +G   +   LF  +++
Sbjct: 500 TVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK 559

Query: 254 SGLCPDDESVQCVLGVISDLG 274
           S +  +D +   +L V S  G
Sbjct: 560 SNVESNDITFVALLSVCSSTG 580


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 253/874 (28%), Positives = 399/874 (45%), Gaps = 120/874 (13%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           + LLK   S+       TVH   +  GL      SG L++ Y++      +  +F  +  
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 223 -RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR 276
             +V LW  ++RA   NG   +    + ++    L PD  +   V+   +     +LG  
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 277 HEEQVQAYAIKLLLYNNNS------------------------NVVLWNKKLSGYLQVGD 312
             E       +  LY  N+                        + V WN  +SGY   G 
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A++ +     + +  D  T    L A      +  G  +HG   K G    VI+GN 
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 373 LINMYSK------------------------------------------MGCVCGLRTDQ 390
           L++MY K                                          M  + G   D 
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDM 322

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            ++ S +RA     + L + K +H + I +    D+     LID+Y + G +  A+ +F+
Sbjct: 323 LSITSTIRACGQSGD-LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D  TWN++I GY  S    + LE F  M     + D +T    +     L  + Q
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQLADINQ 440

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+ +H   +K GFE +L + + +LD+Y KCG M D   +F+ + A D ++W T+I+  V 
Sbjct: 441 GRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVH 500

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
             +  +   + ++MR  G++PDE T   ++   S L    QG++IH  + K    S+  +
Sbjct: 501 FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPI 560

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +L++MY+KCG++E+   +FK M  ++ V W A++     +G G++ LK F+DM+  GV
Sbjct: 561 GNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGV 620

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            PDSV FI  + ACS++G+V E    F  M+  Y +EP +EHY+ +VD L R+G   +A 
Sbjct: 621 LPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE 680

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           E ILSMP +  AS+  ALL ACR +G+T   + V++K++ L   D+  YVL+SNI+A   
Sbjct: 681 EFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLG 740

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
           +WD V + R  MK K +KK+P                        D +   +E L++ + 
Sbjct: 741 KWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMA 800

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK---------- 897
           + GYV D  F L DVEE++K   L  HSE+LA A+GL++T P S +L  K          
Sbjct: 801 KEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHT 860

Query: 898 -----------EPLY--ANRFHHLRDGMCPCADN 918
                      E L   ANRFH  +DG C C D+
Sbjct: 861 VTKYITKIMQREILVRDANRFHRFKDGACSCGDH 894



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 171/713 (23%), Positives = 315/713 (44%), Gaps = 96/713 (13%)

Query: 45  SHFSSSSSSSQWF---SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           S+F+++   SQ F   S+L+   S  +    ++ H+ I+ S        +  L++ Y++ 
Sbjct: 8   SNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQV 67

Query: 102 GSLVYARRLFDKM-PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
              + +  +F  + P  ++  WNSI+ A  H+G       T+    +  +RE        
Sbjct: 68  KDPISSVSVFRSISPTNNVYLWNSIIRALTHNGL-----FTQALGYYTEMREKKLQPDAF 122

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   ++  C     +     VH +A+++G   D ++  AL+++YS+F  +  A+++F+ M
Sbjct: 123 TFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEM 182

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------------- 267
             RD V W  ++  Y  NGF E+   ++     +G+ PD  ++  VL             
Sbjct: 183 SNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGV 242

Query: 268 ---GVISDLG------------------KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
              GVI  +G                  +R  E  + ++ K+ + ++    V WN  + G
Sbjct: 243 AVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS-KMAVKDS----VTWNTMICG 297

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q+G +  +++ F++MI   V  D ++    + A   + +L +G+ +H   + SGF   
Sbjct: 298 YAQLGRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECD 356

Query: 367 VIVGNSLINMYSKMGCVC--------------------------------GL-------- 386
            +  N LI+MY+K G +                                 GL        
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM 416

Query: 387 --RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
             + D  T   +L   S L + ++  + IH   IK    A+  +  +L+DVY + G M +
Sbjct: 417 ERKPDSVTFVLLLSIFSQLAD-INQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
              +F      D+ +WN +I   +  ++     ++ + M T G   DE T+   +  C  
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L + +QGK++H Y  KSGFE ++ + + +++MY KCG++ +   +F  +   D V WT +
Sbjct: 536 LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTAL 595

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           IS     GE   AL  +  M LSGV+PD   F   + A S    +++G +   + +K D 
Sbjct: 596 ISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFF-DRMKTDY 654

Query: 625 SSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           + +P +     +VD+ A+ G +  A      M M+ +  LW A+L      GN
Sbjct: 655 NLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 260/605 (42%), Gaps = 90/605 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++       DL LG   H   +      D ++ N L+ MYSR   L  AR +F++M +R
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWNS+++ Y  +G        +   ++   R +       T++ +L  C S   V  
Sbjct: 186 DSVSWNSLISGYCSNGFWE-----DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VHG   KIG+  D  +   L+++Y KF ++REA+ +F  M  +D V W  M+  YA+
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL------- 290
            G  E    LF+D+   G  PD  S+      I   G+  + QV  +  K L+       
Sbjct: 301 LGRHEASVKLFMDM-IDGFVPDMLSIT---STIRACGQSGDLQVGKFVHKYLIGSGFECD 356

Query: 291 -------------------------YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         + V WN  ++GY Q G     +E F  M++
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMK 415

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---- 381
              + DSVTF++ L+  +   ++N G+ IH   +K GF + +I+GNSL+++Y+K G    
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 382 ----------------------------CVCG------LRT-----DQFTLASVLRASSS 402
                                       C  G      +RT     D+ T+  +L   S 
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L       K+IH +  K+   ++  +  ALI++Y + GS+     +F+     D+ TW A
Sbjct: 536 LAVRRQ-GKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTA 594

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I  + +     KAL+ F  M  SG   D +     + AC    M+K+G +     MK+ 
Sbjct: 595 LISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD-RMKTD 653

Query: 523 FELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
           + L+  +   + ++D+  + G +  A+     +P  PD   W  ++S C   G  ++A  
Sbjct: 654 YNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQR 713

Query: 580 IYHQM 584
           +  ++
Sbjct: 714 VSKKI 718



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 217/439 (49%), Gaps = 18/439 (4%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           + +F  +S+L+  SS      L + +H   I +        S  LI  Y +      +  
Sbjct: 17  SQEFLRSSLLKTLSSAKNTPQL-RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVS 75

Query: 448 LFEN-KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
           +F +     ++  WN++I     +    +AL  ++ M     + D  T  + + +C  +L
Sbjct: 76  VFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARIL 135

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L+ G  +H +AM+ GFE DL + + ++DMY +   + +A+ +F ++   D V+W ++IS
Sbjct: 136 DLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLIS 195

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   NG  + AL +YH+ R++G+VPD FT + ++ A   L A+++G  +H  + K+  + 
Sbjct: 196 GYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAG 255

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D  +G  L+ MY K   + +A  +F +M ++++V WN M+ G AQ G  E ++KLF DM 
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM- 314

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G  PD ++    + AC  +G + +  +  H      G E +    + L+D   + G  
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDL-QVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDL 373

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV----AEKLMALE-PFDSSAYVL 801
             A E+  +   + S + +        + G T++G +     + K+M +E   DS  +VL
Sbjct: 374 LAAQEVFDTTKCKDSVTWNSL------INGYTQSGYYKEGLESFKMMKMERKPDSVTFVL 427

Query: 802 LSNIFAAANQWDDVTSARG 820
           L +IF+   Q  D+   RG
Sbjct: 428 LLSIFS---QLADINQGRG 443


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/691 (32%), Positives = 351/691 (50%), Gaps = 90/691 (13%)

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           AI   +N ++  +  DS  ++  L       +L   +Q+H   +KS       V N+L++
Sbjct: 12  AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH 71

Query: 376 MYSKMG-------------------------------------------CVCGLRTDQFT 392
           +Y + G                                           C  G++ +  T
Sbjct: 72  VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
              +L+A +SL   L   K++H         +D  V TAL+ +Y + GS+ EA  +F+N 
Sbjct: 132 YMIILKACASLS-ALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              D+ +W  MI  Y  S N  +A  L   M   G + + IT  + + AC     LK  K
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           ++H +A+ +G ELD+ V + ++ MY K G++ DA+ +F+ +   D V+W  MI    ++G
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
               A  ++ QM+  G  PD   F  ++ A +   ALE  ++IH + +      D  VG 
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT 370

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +LV MY+K G+I+DA ++F +M +RN V WNAM+ GLAQHG G++ L++F  M AHGV+P
Sbjct: 371 ALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKP 430

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           D VTF+ VLSACS+ GLV E    +  M + YGIEP+V H + +VD LGRAGR  EA   
Sbjct: 431 DRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLF 490

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I +M  +   +   ALLG+CR  G+ E G+ VA++ + L+P +++ YVLLSNI+A A +W
Sbjct: 491 IDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKW 550

Query: 813 DDVTSARGEMKRKNVKKDPA-----------DLIFA------------KVEGLIKRIKEG 849
           D V+  R  M+ + ++K+P            D + A              + +I++IK  
Sbjct: 551 DMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAE 610

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------- 893
           GY+PDT  VL +   ++KE  +  HSEKLA  YGL+ TPP + I                
Sbjct: 611 GYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGAT 670

Query: 894 -----LSNKEPLY--ANRFHHLRDGMCPCAD 917
                +  +E +   ANRFHH +DG+C C D
Sbjct: 671 KLISKVEGREIIVRDANRFHHFKDGVCSCGD 701



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 171/371 (46%), Gaps = 35/371 (9%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F +  H     ++  +  IL+   S S L  GK  HA I +     D  +   L+ MY +
Sbjct: 117 FREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGK 176

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CGS+  ARR+FD + + D+ISW  ++ AYA SG G      E +RL   + +     + +
Sbjct: 177 CGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGK-----EAYRLMLQMEQEGFKPNAI 231

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L  C S G +   + VH +AL  GL  D  V  ALV +Y+K G I +A+ +FD M
Sbjct: 232 TYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------ 274
           + RDVV W VM+ A+AE+G G E + LF+ +   G  PD      +L   +  G      
Sbjct: 292 KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVK 351

Query: 275 --KRH------EEQVQAYAIKLLLYNNNS---------------NVVLWNKKLSGYLQVG 311
              RH      E  V+     + +Y+ +                NVV WN  +SG  Q G
Sbjct: 352 KIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHG 411

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ-QIHGTTLKSGFYSAVIVG 370
               A+E F  M    V+ D VTF+  L+A +    ++ G+ Q    T   G    V   
Sbjct: 412 LGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHC 471

Query: 371 NSLINMYSKMG 381
           N ++++  + G
Sbjct: 472 NCMVDLLGRAG 482



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 213/506 (42%), Gaps = 80/506 (15%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           + S +++  + +      + S  +  +L+  +   DL+  K  H  I+ S    +  + N
Sbjct: 8   TLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           NL+ +Y  CG L  AR +FD +  +   SWN+++A Y        ++  +  RLFR +  
Sbjct: 68  NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEH-----KHAEDAMRLFREMCH 122

Query: 153 SITFTSRLTLAPLLKLCLS-SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                +  T   +LK C S S   W  E VH      GL  D  V  AL+ +Y K G I 
Sbjct: 123 EGVQPNAGTYMIILKACASLSALKWGKE-VHACIRHGGLESDVRVGTALLRMYGKCGSIN 181

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +FD +   D++ W VM+ AYA++G G+E + L + + + G  P+  +   +L   +
Sbjct: 182 EARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241

Query: 272 DLG--------KRH------EEQVQAYAIKLLLYNNNS---------------NVVLWNK 302
             G         RH      E  V+     + +Y  +                +VV WN 
Sbjct: 242 SEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNV 301

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            +  + + G  H A + F+ M     + D++ FL  L A A    L   ++IH   L SG
Sbjct: 302 MIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSG 361

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSLP---------EGLHLSK 411
               V VG +L++MYSK G +   R   D+  + +V+  ++ +          + L + +
Sbjct: 362 LEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFR 421

Query: 412 QIHVHAIKNDTVADSFVSTA--------------------------------LIDVYCRN 439
           ++  H +K D V    V +A                                ++D+  R 
Sbjct: 422 RMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRA 481

Query: 440 GSMAEAEYLFENKD-GFDLATWNAMI 464
           G + EA+   +N     D ATW A++
Sbjct: 482 GRLMEAKLFIDNMAVDPDEATWGALL 507



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/507 (22%), Positives = 210/507 (41%), Gaps = 80/507 (15%)

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           RL R L      T       +LK CL    + A++ VH   +K  +  +  V   L+++Y
Sbjct: 19  RLQRGL-----ITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVY 73

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            + G+++EA+ +FD + ++    W  M+  Y E+   E+   LF ++   G+ P+  +  
Sbjct: 74  IECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYM 133

Query: 265 CVLGVISDL-----GK------RH---EEQVQAYAIKLLLYNN---------------NS 295
            +L   + L     GK      RH   E  V+     L +Y                 N 
Sbjct: 134 IILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNH 193

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +++ W   +  Y Q G+   A    + M +   + +++T++  L A A    L   +++H
Sbjct: 194 DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------- 384
              L +G    V VG +L+ MY+K G +                                
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G + D     S+L A +S    L   K+IH HA+ +    D  V TAL
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACAS-AGALEWVKKIHRHALDSGLEVDVRVGTAL 372

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           + +Y ++GS+ +A  +F+     ++ +WNAMI G         ALE+F  M   G + D 
Sbjct: 373 VHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDR 432

Query: 493 ITIATAVKACGCLLMLKQGK-QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T    + AC    ++ +G+ Q  A     G E D+   + ++D+  + G +++A+   +
Sbjct: 433 VTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFID 492

Query: 552 DIPA-PDDVAWTTMISGCVDNGEEDLA 577
           ++   PD+  W  ++  C   G  +L 
Sbjct: 493 NMAVDPDEATWGALLGSCRTYGNVELG 519



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 10/209 (4%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FLQ         +  + SIL    S   L   K  H   L+S    D  +   L+ MYS+
Sbjct: 319 FLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSK 378

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            GS+  AR +FD+M  R+++SWN++++  A  G G      +   +FR +        R+
Sbjct: 379 SGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQ-----DALEVFRRMTAHGVKPDRV 433

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           T   +L  C  +G V    + +    ++ G+  D      +V++  + G++ EAK   D 
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493

Query: 220 MQ-ERDVVLWKVML---RAYAENGFGEEV 244
           M  + D   W  +L   R Y     GE V
Sbjct: 494 MAVDPDEATWGALLGSCRTYGNVELGELV 522


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/762 (30%), Positives = 394/762 (51%), Gaps = 45/762 (5%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA+++ +  I    L N L++ YS+  +  YA +LFDKMP+R++++W ++++++   G  
Sbjct: 71  HAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG-- 128

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
              +V++ F +F  +R S    +  T A LL+ C +         +HG  ++ GL  ++F
Sbjct: 129 ---SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKF 185

Query: 196 VSGALVNIYSKFGK-IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL-HR 253
              +LV +Y K G  +R+A  +F G+ ERDVV W VM+  +A+NG    V  LF ++   
Sbjct: 186 AGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEE 245

Query: 254 SGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
            GL PD  +   +L   S L     E +Q + I +  +    +VV+ +  +  Y +  D 
Sbjct: 246 QGLKPDRITFASLLKCCSVLN----EVMQIHGI-VYKFGAEVDVVVESAMVDLYAKCRDV 300

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
               + F +M +                    DN      I G T+ +        G   
Sbjct: 301 SSCRKIFDSMEKK-------------------DNFVWSSMISGYTMNNR-------GEEA 334

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           +N +  M C   ++ DQ  L+S L+A   + E L+   Q+H   IKN    D FV++ L+
Sbjct: 335 VNFFKDM-CRQRVKLDQHVLSSTLKACVEI-EDLNTGVQVHGLMIKNGHQNDCFVASVLL 392

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS-HKALELFSHMH-TSGERLD 491
           ++Y   G + + E LF   D  D+  WN+MI           + ++LF  +  T+  ++ 
Sbjct: 393 NLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQ 452

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             T+   +K+C     L  G+Q+H+  +KS       V + ++ MY +C  + DA   F 
Sbjct: 453 GATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFV 512

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           DI   DD +W+++I  C  N  E  AL +  +M   G+    ++  + + A S L  + +
Sbjct: 513 DIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISE 572

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+Q+H   IK   S D ++G S++DMYAKCGNIE++  +F +    N V +NA++ G A 
Sbjct: 573 GKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAH 632

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG  ++ +++   ++ +GV P+ VTF+ ++SACS+ G V E    F LM +KY I+P+ E
Sbjct: 633 HGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSE 692

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HYS LVDA GRAGR +EA +++     + S S  R LL ACR   + + G+  A K++ L
Sbjct: 693 HYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHSNRKIGEKSAMKMIEL 749

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPAD 833
            P D + Y+LLSNI+     W++  + R +M +  VKKDP +
Sbjct: 750 NPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGN 791



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 5/308 (1%)

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A  S P  L    QIH   I    ++ + ++  L+  Y ++ +   A  LF+     ++ 
Sbjct: 56  AKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVV 115

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           TW  +I  ++   +  KA E+F+HM  S ER +E T A  ++AC    +   G Q+H   
Sbjct: 116 TWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLL 175

Query: 519 MKSGFELDLCVSSGILDMYVKCG-AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           ++ G E +    S ++ MY+K G  + DA  +F  +   D VAW  MISG   NG+  + 
Sbjct: 176 VRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMV 235

Query: 578 LSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
             ++ +M    G+ PD  TFA L+K   C + L +  QIH  + K     D  V  ++VD
Sbjct: 236 QRLFSEMWEEQGLKPDRITFASLLK---CCSVLNEVMQIHGIVYKFGAEVDVVVESAMVD 292

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +YAKC ++     +F  M+ ++  +W++M+ G   +  GEE +  F+DM    V+ D   
Sbjct: 293 LYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHV 352

Query: 697 FIGVLSAC 704
               L AC
Sbjct: 353 LSSTLKAC 360



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 6/253 (2%)

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           ++L Q  Q+HA  + + +     +++ +L  Y K      A  +F+ +P  + V WTT+I
Sbjct: 62  IILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLI 121

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           S  +  G    A  +++ MR+S   P+E TFA+L++A +       G QIH  L++    
Sbjct: 122 SSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLE 181

Query: 626 SDPFVGISLVDMYAKCG-NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            + F G SLV MY K G ++ DA  +F  +  R+ V WN M+ G AQ+G+     +LF +
Sbjct: 182 REKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSE 241

Query: 685 M-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           M +  G++PD +TF  +L  CS    V +     H +  K+G E +V   S +VD   + 
Sbjct: 242 MWEEQGLKPDRITFASLLKCCSVLNEVMQ----IHGIVYKFGAEVDVVVESAMVDLYAKC 297

Query: 744 GRTKEAGELILSM 756
                  ++  SM
Sbjct: 298 RDVSSCRKIFDSM 310



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 34/316 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S L+  +   DL  G   H  ++ +    D F+ + L+ +Y+  G L    +LF ++ D+
Sbjct: 355 STLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDK 414

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR-LTLAPLLKLCLSSGYVW 176
           D+++WNS++ A A  G+G         +LF+ LR +     +  TL  +LK C     + 
Sbjct: 415 DIVAWNSMILAQARPGQG----CGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLP 470

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           A   +H   +K  L     V  ALV++YS+  +I +A   F  +  +D   W  ++    
Sbjct: 471 AGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCK 530

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------- 287
           +N    +   L  ++   G+     S+   +   S L    E +Q+  +AIK        
Sbjct: 531 QNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVY 590

Query: 288 -----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                + +Y    N+               V +N  +SGY   G    AIE    + ++ 
Sbjct: 591 IGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNG 650

Query: 328 VQYDSVTFLVALAAVA 343
           V  + VTFL  ++A +
Sbjct: 651 VAPNHVTFLALMSACS 666


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/580 (36%), Positives = 311/580 (53%), Gaps = 49/580 (8%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           ++ + FT     +AS SL   L + KQ+H  A+K   ++D FV  +  D+Y + G   EA
Sbjct: 104 IQPNDFTFPCAFKASGSLRSPL-VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     ++ATWNA +   +L      AL  F      G   + IT    + AC   
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGA 222

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+ G+Q+H + ++SGFE D+ V++G++D Y KC  +  ++ IF+ I  P+DV+W +MI
Sbjct: 223 SYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMI 282

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
              V N EE+ A  ++ + R  G+ P +F  + ++ A + L+ LE G+ +H   +K    
Sbjct: 283 VSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 342

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            + FVG +LVDMY KCG+IEDA   F +M  RN V WNAM+ G A  G  +  + LF++M
Sbjct: 343 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 402

Query: 686 K--AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
              +H V P+ VTF+ VLSACS  G V+   E F  MR +YGIEP  EHY+ +VD LGRA
Sbjct: 403 TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRA 462

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  ++A + I  MP   + S+  ALLGA ++ G +E GK  A+ L  L+P DS  +VLLS
Sbjct: 463 GMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLS 522

Query: 804 NIFAAANQWDDVTSARGEMKRKNVK-------------------KDPADLIFAKVEGLIK 844
           N+FAAA +W++ T  R EMK   +K                   KD +    ++++ ++ 
Sbjct: 523 NMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLA 582

Query: 845 RIK----EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPL 900
           +++      GY+PDT F L D+EEEEK   ++YHSEK+A A+GLIS P    I   K   
Sbjct: 583 KLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 642

Query: 901 YA-----------------------NRFHHLRDGMCPCAD 917
                                    N FH  RD  C C D
Sbjct: 643 ICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRD 682



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 182/390 (46%), Gaps = 6/390 (1%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           +LAS++ ++ S  +   L +  H   IK  D    SF+   L+++Y +      A+ L  
Sbjct: 8   SLASLVESAVST-QCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 + TW A+I G + +     AL  FS+M     + ++ T   A KA G L     
Sbjct: 67  LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GKQ+HA A+K+G   D+ V     DMY K G   +A+ +F+++P  +   W   +S  V 
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
            G  D AL+ + + R  G  P+  TF   + A +  + L  GRQ+H  +++    +D  V
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
              L+D Y KC  +  + I+F  +   N V W +M+V   Q+   E+   +F   +  G+
Sbjct: 247 ANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGI 306

Query: 691 EPDSVTFIGVLSACSYTGL-VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           EP       VLSAC+  GL V E  ++ H +  K  +   +   S LVD  G+ G  ++A
Sbjct: 307 EPTDFMVSSVLSACA--GLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 364

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTE 779
                 MP E +     A++G    QG  +
Sbjct: 365 ERAFDEMP-ERNLVTWNAMIGGYAHQGQAD 393



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/656 (21%), Positives = 235/656 (35%), Gaps = 155/656 (23%)

Query: 39  LPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNNLMTM 97
           +PFL  +  +S         ++  A+ST    LG++ HA+I+ +   P   F+ N+L+ M
Sbjct: 1   MPFLSPNSLAS---------LVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNM 51

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           YS+      A+ L    P+R +++W +++A    +G       T     F ++R      
Sbjct: 52  YSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGR-----FTSALFHFSNMRRDSIQP 106

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           +  T     K   S       + VH  A+K G + D FV  +  ++YSK G   EA+ +F
Sbjct: 107 NDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMF 166

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD------------------ 259
           D M ER++  W   L      G  ++    F++    G  P+                  
Sbjct: 167 DEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLR 226

Query: 260 --------------DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
                         +  V    G+I   GK H  QV    I +    +  N V W   + 
Sbjct: 227 LGRQLHGFVLQSGFEADVSVANGLIDFYGKCH--QVGCSEI-IFSGISKPNDVSWCSMIV 283

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            Y+Q  +   A   F+   +  ++         L+A AG   L +G+ +H   +K+    
Sbjct: 284 SYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVG 343

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
            + VG++L++MY K G          ++    RA   +PE                    
Sbjct: 344 NIFVGSALVDMYGKCG----------SIEDAERAFDEMPE-------------------- 373

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
                       RN                 L TWNAMI GY     +  A+ LF  M  
Sbjct: 374 ------------RN-----------------LVTWNAMIGGYAHQGQADMAVTLFDEMTC 404

Query: 486 SGERL--DEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYV 538
              R+  + +T    + AC     +  G ++       Y ++ G E   CV    +D+  
Sbjct: 405 GSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV----VDLLG 460

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           + G +  A      +P                                  + P    +  
Sbjct: 461 RAGMVEQAYQFIKKMP----------------------------------IRPTVSVWGA 486

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           L+ AS      E G+    NL +LD   D    + L +M+A  G  E+A ++ K+M
Sbjct: 487 LLGASKMFGKSELGKVAADNLFELD-PLDSGNHVLLSNMFAAAGRWEEATLVRKEM 541



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 11/242 (4%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F++  H     +   + + L      S L LG+  H  +L S    D  + N L+ 
Sbjct: 193 ALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLID 252

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
            Y +C  +  +  +F  +   + +SW S++ +Y      N E         R+ +E I  
Sbjct: 253 FYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQ----NDEEEKACLVFLRARKEGIEP 308

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T    ++ +L  C     +   ++VH  A+K  +V + FV  ALV++Y K G I +A+  
Sbjct: 309 TD-FMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERA 367

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL----HRSGLCPDDESVQCVLGVISD 272
           FD M ER++V W  M+  YA  G  +    LF ++    HR  + P+  +  CVL   S 
Sbjct: 368 FDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR--VAPNYVTFVCVLSACSR 425

Query: 273 LG 274
            G
Sbjct: 426 AG 427


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/597 (34%), Positives = 339/597 (56%), Gaps = 58/597 (9%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           + ++ +M  + G+  D  T++SVL     L +   L+  +H++A+K+    + FV  A+I
Sbjct: 155 VGLFGRM-VMEGVAGDAVTVSSVLPMCVLLGD-RALALAMHLYAVKHGLDDELFVCNAMI 212

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           DVY + G + E   +F+     DL TWN++I G+        A+E+F  M  SG   D +
Sbjct: 213 DVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVL 272

Query: 494 TI---ATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSI 549
           T+   A+A+  CG +     G+ +H Y ++ G+++ D+   + I+DMY K   +  AQ +
Sbjct: 273 TLLSLASAIAQCGDIC---GGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRM 329

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIY-HQMRLSGVVPDEFTFAILVKASSCLTA 608
           F+ +P  D V+W T+I+G + NG    A+ +Y H  +  G+ P + TF  ++ A S L A
Sbjct: 330 FDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGA 389

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L+QG ++HA  IK   + D +VG  ++D+YAKCG +++A +LF+Q   R+T  WNA++ G
Sbjct: 390 LQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISG 449

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
           +  HG+G + L LF  M+  G+ PD VTF+ +L+ACS+ GLV +    F++M+  YGI+P
Sbjct: 450 VGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKP 509

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
             +HY+ +VD  GRAG+  +A + I +MP +  +++  ALLGACR+ G+ E GK  ++ L
Sbjct: 510 IAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNL 569

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------- 832
             L+P +   YVL+SN++A   +WD V   R  ++R+N++K P                 
Sbjct: 570 FELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSG 629

Query: 833 ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                    + I  ++  L+ +I+  GYVPD  FVL DVEE+EKE+ L  HSE+LA A+G
Sbjct: 630 NQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFG 689

Query: 884 LISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +I+TPP + +                     ++ +E +   +NRFHH +DG C C D
Sbjct: 690 IINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGD 746



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 193/385 (50%), Gaps = 8/385 (2%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEY 447
           D FT   +LRA+    +G   + Q+H  A++   +  D+F S AL+  Y R G + +A  
Sbjct: 70  DAFTFPPLLRAA----QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYR 125

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
            F+     D+  WNAM+ G   +  + +A+ LF  M   G   D +T+++ +  C  L  
Sbjct: 126 AFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGD 185

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
                 MH YA+K G + +L V + ++D+Y K G + + + +F+ + + D V W ++ISG
Sbjct: 186 RALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS-S 626
               G+   A+ ++  MR SGV PD  T   L  A +    +  GR +H  +++      
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D   G ++VDMYAK   IE A  +F  M +R+ V WN ++ G  Q+G   E + +++ M+
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 687 AH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
            H G++P   TF+ VL A S+ G + +     H +  K G+  +V   + ++D   + G+
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQG-TRMHALSIKTGLNLDVYVGTCVIDLYAKCGK 424

Query: 746 TKEAGELILSMPFEASASMHRALLG 770
             EA  L    P  ++   +  + G
Sbjct: 425 LDEAMLLFEQTPRRSTGPWNAVISG 449



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 244/592 (41%), Gaps = 128/592 (21%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLV-WDEFVSGALVNIYSKFGKIREAKFLFD 218
            T  PLL+     G    +  +H  AL++GL+  D F SGALV+ Y +FG++R+A   FD
Sbjct: 72  FTFPPLLRAAQGPG---TAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFD 128

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH- 277
            M+ RDV  W  ML     N    E   LF  +   G+  D  +V  VL +   LG R  
Sbjct: 129 EMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRAL 188

Query: 278 EEQVQAYAIK------LLLYN----------------------NNSNVVLWNKKLSGYLQ 309
              +  YA+K      L + N                      ++ ++V WN  +SG+ Q
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQ 248

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVI 368
            G    A+E F  M  S V  D +T L   +A+A   ++  G+ +H   ++ G+    +I
Sbjct: 249 GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDII 308

Query: 369 VGNSLINMYSKMGCV--------------------------------------------C 384
            GN++++MY+K+  +                                             
Sbjct: 309 AGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHE 368

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL+  Q T  SVL A S L   L    ++H  +IK     D +V T +ID+Y + G + E
Sbjct: 369 GLKPIQGTFVSVLPAYSHL-GALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDE 427

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LFE         WNA+I G  +  +  KAL LFS M   G   D +T  + + AC  
Sbjct: 428 AMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSH 487

Query: 505 LLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDD 558
             ++ QG+        AY +K   +   C    ++DM+ + G + DA     ++P  PD 
Sbjct: 488 AGLVDQGRNFFNMMQTAYGIKPIAKHYAC----MVDMFGRAGQLDDAFDFIRNMPIKPDS 543

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
             W  ++  C                R+ G V                   E G+    N
Sbjct: 544 AIWGALLGAC----------------RIHGNV-------------------EMGKVASQN 568

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGN---IEDAYILFKQMDMRNTVLWNAMLV 667
           L +LD  +  +  + + +MYAK G    +++   L ++ +++ T  W+++ V
Sbjct: 569 LFELDPKNVGYY-VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEV 619



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 157/364 (43%), Gaps = 53/364 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   +   D  L  + H   +      + F+ N ++ +Y + G L   R++FD M  R
Sbjct: 175 SVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR 234

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL++WNSI++ +   G+     V     +F  +R+S      LTL  L       G +  
Sbjct: 235 DLVTWNSIISGHEQGGQ-----VASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289

Query: 178 SETVHGYALKIGLVWD--EFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
             +VH Y ++ G  WD  + ++G A+V++Y+K  KI  A+ +FD M  RD V W  ++  
Sbjct: 290 GRSVHCYMVRRG--WDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITG 347

Query: 235 YAENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK----- 287
           Y +NG   E  H++  + +  GL P   +   VL   S LG   +  ++ A +IK     
Sbjct: 348 YMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL 407

Query: 288 ---------------------LLLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                +LL+      +   WN  +SG    G    A+  F  M 
Sbjct: 408 DVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQ 467

Query: 325 RSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           +  +  D VTF+  LAA +       G +  N+ Q  +G    +  Y+       +++M+
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYAC------MVDMF 521

Query: 378 SKMG 381
            + G
Sbjct: 522 GRAG 525



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 36/326 (11%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D F +  L+  Y R G +  A R FD+M  RD+ +WN++L     SG        E   L
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAML-----SGLCRNARAAEAVGL 157

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +         +T++ +L +C+  G    +  +H YA+K GL  + FV  A++++Y K
Sbjct: 158 FGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGK 217

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + E + +FDGM  RD+V W  ++  + + G       +F  +  SG+ PD  ++  +
Sbjct: 218 LGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSL 277

Query: 267 LGVISDLGKR-HEEQVQAYAIK--------------LLLYNNNSNV-------------- 297
              I+  G       V  Y ++              + +Y   S +              
Sbjct: 278 ASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRD 337

Query: 298 -VLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
            V WN  ++GY+Q G    AI  + +M +   ++    TF+  L A +    L  G ++H
Sbjct: 338 AVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMH 397

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG 381
             ++K+G    V VG  +I++Y+K G
Sbjct: 398 ALSIKTGLNLDVYVGTCVIDLYAKCG 423


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 255/814 (31%), Positives = 393/814 (48%), Gaps = 113/814 (13%)

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E  TF S   +   +K CL   Y  A +      L+  + ++  +SG     Y+  G++ 
Sbjct: 81  EPTTFVSNCLMQMYIK-CLYLDY--ACKVFDKMYLRDVVSYNSIISG-----YASCGEMD 132

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A+  F  M ERDVV W  ++  + +NG   +   +F+++ R G+  D  S+  VL    
Sbjct: 133 IARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACG 192

Query: 272 DLGKRHEE-----QVQAYAIK-------------LLLYNN---------------NSNVV 298
            L    EE     QV    +K             L +Y                   N V
Sbjct: 193 AL----EECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWV 248

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W+  ++G +Q   N   +E F  M    V      +     + A    L LG+++H   
Sbjct: 249 SWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHA 308

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVC---------------------------------- 384
           LKS F S +IVG + ++MY+K G +                                   
Sbjct: 309 LKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQAL 368

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    GL  D+ TL+  L A +S+   L   +Q+H  A+K+ ++++  V+ A++D+
Sbjct: 369 KSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHGLAVKSISMSNICVANAILDM 427

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y +  ++AEA  LF+  +  D  +WNA+I     + N  + L  F+ M  S    D+ T 
Sbjct: 428 YGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTY 487

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + +KAC     L  G ++H   +KSG   D  V + ++DMY KCG +  A  I +    
Sbjct: 488 GSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQ 547

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              V+W  +ISG     + + A   + +M   GV PD FT+A ++   + L  +  G+QI
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           HA +IK +  SD ++  +LVDMY+KCGN++D+ ++F++   R+ V WNAML G A HG G
Sbjct: 608 HAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLG 667

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           EE LKLFE M+   V+P+  TF+ VL AC++ GLV +    F +M  +YG++P+ EHYS 
Sbjct: 668 EEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSC 727

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD LGR+GR  EA  L+  MPFEA A + R LL  C++ G+ E  +     L+ L+P D
Sbjct: 728 MVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQD 787

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
           SSA VLLSNI+A A  W +V+  R  M+   +KK+P                        
Sbjct: 788 SSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRD 847

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           + I+ K+  LI  ++  GY+PD D VLLD E EE
Sbjct: 848 EEIYEKLGVLIGEMQSVGYIPDCD-VLLDEEVEE 880



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 194/764 (25%), Positives = 329/764 (43%), Gaps = 107/764 (14%)

Query: 16  TYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKST 75
           T + FS      ++ +P    +    L ++     +    +  I +     + L  GK  
Sbjct: 12  TRLFFSYHAIPLFKKIPPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQA 71

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HAR++     P  F++N LM MY +C  L YA ++FDKM  RD++S+NSI++ YA  GE 
Sbjct: 72  HARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEM 131

Query: 136 NA----------------ENVTEGFRLFRSLRESITF----------TSRLTLAPLLKLC 169
           +                  +V  GF      R+SI              R +LA +LK C
Sbjct: 132 DIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKAC 191

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            +         VHG  +K G   D     AL+ +Y+K  ++ ++  +F  + E++ V W 
Sbjct: 192 GALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWS 251

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV------QCVLGVISDLGKR-HEEQVQ 282
            M+    +N    E   LF ++   G+    +S+       C       LGK  H   ++
Sbjct: 252 AMIAGCVQNDRNVEGLELFKEMQGVGV-GVSQSIYASLFRSCAALSALRLGKELHSHALK 310

Query: 283 -----------------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                  A A K+L      ++  +N  + GY +      A++ 
Sbjct: 311 SAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKS 370

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  ++++ + +D +T   AL A A       G+Q+HG  +KS   S + V N++++MY K
Sbjct: 371 FQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGK 430

Query: 380 MGCVCG-------------------------------------------LRTDQFTLASV 396
              +                                             +  D FT  SV
Sbjct: 431 CKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSV 490

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L+A +   + L+   +IH   IK+    DSFV  AL+D+YC+ G + +A+ + +  +   
Sbjct: 491 LKACAG-RQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKT 549

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           + +WNA+I G+ L   S  A + FS M   G   D  T A  +  C  L  +  GKQ+HA
Sbjct: 550 MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHA 609

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
             +K   + D+ + S ++DMY KCG M D+Q +F   P  D V W  M+ G   +G  + 
Sbjct: 610 QIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEE 669

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGIS 633
           AL ++  M+L  V P+  TF  +++A + +  +++G      ++    LD  S+ +    
Sbjct: 670 ALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYS--C 727

Query: 634 LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +VD+  + G I++A  L ++M    + V+W  +L     HGN E
Sbjct: 728 MVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVE 771


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/729 (32%), Positives = 365/729 (50%), Gaps = 97/729 (13%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL       NVV WN  +SGY Q+G  H  +  F     S+++ D  TF  AL+    
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
           T +L LG+ IH     SG    V++ NSLI+MY K G +                     
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 384 ----------------------CGLRTDQFTLASVLRA-SSSLPEGLHLSKQIHVHAIKN 420
                                  GL  + + L S L+A  S+    +   K +H  A+K 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-----SHK 475
               D  V TAL+D Y + G + +A  +F+     ++  +NAMI G++         +++
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ LF  M + G +  E T ++ +KAC  +   + GKQ+HA   K   + D  + + +++
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVE 372

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y   G++ D    F+  P  D V+WT++I G V NG+ +  L+++H++  SG  PDEFT
Sbjct: 373 LYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFT 432

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            +I++ A + L A++ G QIHA  IK    +   +  S + MYAKCG+I+ A + FK+  
Sbjct: 433 ISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK 492

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             + V W+ M+   AQHG  +E + LFE MK  G+ P+ +TF+GVL ACS+ GLV E   
Sbjct: 493 NPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR 552

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F +M++ +GI P V+H + +VD LGRAGR  EA   I+   FE    M R+LL ACRV 
Sbjct: 553 YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 612

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---- 831
             T+TGK VAE+++ LEP  +++YVLL NI+  A      T  R  MK + VKK+P    
Sbjct: 613 KATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSW 672

Query: 832 -------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                              + +I+ ++E +++ IK+  Y+ D   V    E + K+ ++ 
Sbjct: 673 IEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMV 731

Query: 873 -YHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHL 908
            YHSEKLA  +G+IS P S+ +                     L N+E +  +  RFH  
Sbjct: 732 SYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRF 791

Query: 909 RDGMCPCAD 917
           RDG C C D
Sbjct: 792 RDGSCSCGD 800



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 190/383 (49%), Gaps = 15/383 (3%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D  T   +++ S+     +H  K  H+H IK       F+   L+ +YC+ G    
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIH-GKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A+ LF+     ++ +WN++I GY      H+ + LF     S  RLD+ T + A+  CG 
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            L L+ G+ +HA    SG    + +++ ++DMY KCG +  A+ +F      D V+W ++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA--SSCLTALEQGRQIHANLIKL 622
           I+G V  G  D  L +  +M   G+  + +     +KA  S+  +++E G+ +H   +KL
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN-----GEE 677
               D  VG +L+D YAK G++EDA  +FK M   N V++NAM+ G  Q          E
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE---NFHLMREKYGIEPEVEHYS 734
            + LF +M++ G++P   TF  +L ACS      EA+E     H    KY ++ +    +
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTI----EAFECGKQIHAQIFKYNLQSDEFIGN 368

Query: 735 FLVDALGRAGRTKEAGELILSMP 757
            LV+    +G  ++  +   S P
Sbjct: 369 ALVELYSLSGSIEDGLKCFHSTP 391



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 142/597 (23%), Positives = 252/597 (42%), Gaps = 87/597 (14%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  +  +++ +  T  L+ GK  H  ++ +   P  FL NNL+ MY +CG    A++LFD
Sbjct: 19  SVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFD 78

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +MP R+++SWNS+++ Y   G  +     E   LF+  R S     + T +  L +C  +
Sbjct: 79  RMPKRNVVSWNSLISGYTQMGFYH-----EVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +     +H      GL     ++ +L+++Y K G+I  A+ +F+   E D V W  ++
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193

Query: 233 RAYAENGFGEEVFHLFVDLHRSGL-------------CPDD--ESVQC---VLGVISDLG 274
             Y   G  +E+  L V + R GL             C  +   S++C   + G    LG
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253

Query: 275 KRHEEQVQAY-------------AIKLLLYNNNSNVVLWNKKLSGYLQ---VGDNHG--A 316
              +  V                A K+     + NVV++N  ++G+LQ   + D     A
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 313

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           +  F  M    ++    TF   L A +  +    G+QIH    K    S   +GN+L+ +
Sbjct: 314 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 373

Query: 377 YSKMGCV-------------------------------------------CGLRTDQFTL 393
           YS  G +                                            G + D+FT+
Sbjct: 374 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 433

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           + +L A ++L   +   +QIH +AIK      + +  + I +Y + G +  A   F+   
Sbjct: 434 SIMLSACANLA-AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK 492

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D+ +W+ MI        + +A++LF  M  SG   + IT    + AC    ++++G +
Sbjct: 493 NPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR 552

Query: 514 MHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
                 K  G   ++  S+ I+D+  + G + +A+S   D     D V W +++S C
Sbjct: 553 YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 609



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 4/287 (1%)

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G  LD +T    V+       L  GK  H + +K+ F+  L + + +L MY KCG    A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +F+ +P  + V+W ++ISG    G     ++++ + R+S +  D+FTF+  +      
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 607 TALEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
             L  GR IHA LI +     P  +  SL+DMY KCG I+ A ++F+  D  ++V WN++
Sbjct: 134 LDLRLGRLIHA-LITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS-EAYENFHLMREKY 724
           + G  + G+ +E L+L   M  HG+  +S      L AC      S E  +  H    K 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           G++ +V   + L+D   + G  ++A ++   MP + +  M+ A++  
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 238/729 (32%), Positives = 372/729 (51%), Gaps = 110/729 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG---TDNLNLGQ 352
           N V WN  +S          A+E F  M+  NV+  S T +  + A +     + L +G+
Sbjct: 76  NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 135

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMG-------------------------CVC--- 384
           Q+H   L+ G  ++ I+ N+L+ MY K+G                          +C   
Sbjct: 136 QVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 194

Query: 385 ---------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFV 428
                          G+  D+FT++SVL A S L E L   K++H +A+KN ++  +SFV
Sbjct: 195 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFV 253

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            +AL+D+YC    +     +F+      +  WNAMI GY  + +  +AL LF  M  S  
Sbjct: 254 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 313

Query: 489 RL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            L +  T+A  V AC       + + +H + +K G + D  V + ++DMY + G +  A 
Sbjct: 314 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 373

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM------------RLSGVVPDEFT 595
            IF  +   D V W TMI+G V +   + AL + H+M            R+S + P+  T
Sbjct: 374 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSIT 432

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
              ++ + + L+AL +G++IHA  IK + ++D  VG +LVDMYAKCG ++ +  +F Q+ 
Sbjct: 433 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 492

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            +N + WN +++    HGNG+E + L   M   GV+P+ VTFI V +ACS++G+V E   
Sbjct: 493 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 552

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE-ASASMHRALLGACRV 774
            F++M+  YG+EP  +HY+ +VD LGRAGR KEA +L+  MP +   A    +LLGA R+
Sbjct: 553 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 612

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
             + E G+  A+ L+ LEP  +S YVLL+NI+++A  WD  T  R  MK + V+K+P   
Sbjct: 613 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 672

Query: 832 --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                               ++ +   +E L +R+++ GYVPDT  VL +VEE+EKE  L
Sbjct: 673 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 732

Query: 872 YYHSEKLARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHL 908
             HSEKLA A+G+++T P ++I   K     N                       RFH  
Sbjct: 733 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 792

Query: 909 RDGMCPCAD 917
           ++G C C D
Sbjct: 793 KNGTCSCGD 801



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 233/494 (47%), Gaps = 61/494 (12%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMG 381
           MI   ++ D+  F   L AVA   ++ LG+QIH    K G+   +V V N+L+N+Y K G
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 382 -------------------------CVC------------------GLRTDQFTLASVLR 398
                                     +C                   +    FTL SV+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 399 ASSSL--PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           A S+L  PEGL + KQ+H + ++   + +SF+   L+ +Y + G +A ++ L  +  G D
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           L TWN ++     +    +ALE    M   G   DE TI++ + AC  L ML+ GK++HA
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239

Query: 517 YAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
           YA+K+G  + +  V S ++DMY  C  ++  + +F+ +       W  MI+G   N  + 
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299

Query: 576 LALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
            AL ++  M  S G++ +  T A +V A     A  +   IH  ++K     D FV  +L
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 359

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK------AH 688
           +DMY++ G I+ A  +F +M+ R+ V WN M+ G     + E+ L L   M+      + 
Sbjct: 360 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 419

Query: 689 G-----VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           G     ++P+S+T + +L +C+    +++  E  H    K  +  +V   S LVD   + 
Sbjct: 420 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 478

Query: 744 GRTKEAGELILSMP 757
           G  + + ++   +P
Sbjct: 479 GCLQMSRKVFDQIP 492



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 58/351 (16%)

Query: 69  LLLGKSTHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L  GK  HA  L N S   + F+ + L+ MY  C  ++  RR+FD M DR +  WN+++A
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            Y+ +     E+  E   LF  + ES     +  T+A ++  C+ SG     E +HG+ +
Sbjct: 291 GYSQN-----EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 345

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE--- 243
           K GL  D FV   L+++YS+ GKI  A  +F  M++RD+V W  M+  Y  +   E+   
Sbjct: 346 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 405

Query: 244 VFHLFVDLHRS--------GLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYN 292
           + H   +L R          L P+  ++  +L     +S L K  E  + AYAIK  L  
Sbjct: 406 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE--IHAYAIKNNLAT 463

Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           +                              NV+ WN  +  Y   G+   AI+    M+
Sbjct: 464 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 523

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKSGFYSAVI 368
              V+ + VTF+   AA + +  ++ G +I       +G    S  Y+ V+
Sbjct: 524 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 574



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 43/360 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPD 116
           ++L+      D+ LGK  HA +       D   + N L+ +Y +CG      ++FD++ +
Sbjct: 15  ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 74

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC----LSS 172
           R+ +SWNS++++       + E        FR + +     S  TL  ++  C    +  
Sbjct: 75  RNQVSWNSLISSLC-----SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 129

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G +   + VH Y L+ G + + F+   LV +Y K GK+  +K L      RD+V W  +L
Sbjct: 130 GLMMGKQ-VHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 187

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK---- 287
            +  +N    E      ++   G+ PD+ ++  VL   S L   R  +++ AYA+K    
Sbjct: 188 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 247

Query: 288 ----------LLLYNNNSNVV---------------LWNKKLSGYLQVGDNHGAIECFVN 322
                     + +Y N   V+               LWN  ++GY Q   +  A+  F+ 
Sbjct: 248 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 307

Query: 323 MIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           M  S  +  +S T    + A   +   +  + IHG  +K G      V N+L++MYS++G
Sbjct: 308 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 367



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 9/182 (4%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           S  S   +S    +IL    + S L  GK  HA  + ++   D  + + L+ MY++CG L
Sbjct: 422 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 481

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
             +R++FD++P +++I+WN I+ AY   G G      E   L R +       + +T   
Sbjct: 482 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ-----EAIDLLRMMMVQGVKPNEVTFIS 536

Query: 165 LLKLCLSSGYVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           +   C  SG V     +  Y +K   G+         +V++  + G+I+EA  L + M  
Sbjct: 537 VFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMP 594

Query: 223 RD 224
           RD
Sbjct: 595 RD 596


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 261/809 (32%), Positives = 407/809 (50%), Gaps = 90/809 (11%)

Query: 163  APLLKLCLSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            A LL+ C++ G       VHG+ ++ G +   D F +  L+N+Y+K G    A  +FDG+
Sbjct: 432  ARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGL 491

Query: 221  QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE- 279
             ER++V +  +++ +A  G  EE   LF  L   G     E  Q VL  +  L    +  
Sbjct: 492  PERNMVSFVTLVQGHALRGEFEEASALFQRLRWEG----HEVNQFVLTTVLKLVVAMDTL 547

Query: 280  ----QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                 V A A KL    ++ N  + +  +  Y   G    A   F  ++  +        
Sbjct: 548  GLAWGVHACACKL---GHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKD-------- 596

Query: 336  LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
                 AVA T  ++              YS      + + ++SKM  V   + + F L S
Sbjct: 597  -----AVAWTAMVSC-------------YSENDCPENTLQIFSKMR-VAVSKLNPFALTS 637

Query: 396  VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
            VLRA+  L   + L K IH  ++K     +  V  AL+D+Y + G++ +A   FE     
Sbjct: 638  VLRAAVCL-SSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTND 696

Query: 456  DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
            D+  W+ MI  Y   N + +A ELF  M  S    +E ++++ ++AC  + +L  GKQ+H
Sbjct: 697  DVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIH 756

Query: 516  AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
             +A+K G E +L V + ++D+Y KC  M  +  IF+ +   ++V+W T+I G   +G  +
Sbjct: 757  NHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGE 816

Query: 576  LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
             ALS++ +MR + V   + T++ +++A +   ++    Q+H  + K   +SD  V  SL+
Sbjct: 817  AALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLI 876

Query: 636  DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            D YAKCG I DA  +F+ +   + V WNA++ G A HG      +LF+ M  + ++ + +
Sbjct: 877  DSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDI 936

Query: 696  TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
            TF+ +LS C  TGLVS+    F  MR  +GIEP +EHY+ +V  LGRAGR  +A   I  
Sbjct: 937  TFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGD 996

Query: 756  MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
            +P   SA + RALL +C V  + E G++ AEK++ +EP D + YVLLSN+++AA   D V
Sbjct: 997  IPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQV 1056

Query: 816  TSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL-IKRIKEGGY 851
               R  M+   V+K+P                         +I A +E L +K I+E GY
Sbjct: 1057 AFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIRE-GY 1115

Query: 852  VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------ 893
            VPDTD VL D+EEE+K R L+ HSE+LA AYGL+ TPP   I                  
Sbjct: 1116 VPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKV 1175

Query: 894  ---LSNKEPLY--ANRFHHLRDGMCPCAD 917
               +  +E +    NRFHH  +G C C D
Sbjct: 1176 ISKIVKQEIIVRDINRFHHFEEGTCSCGD 1204



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 170/658 (25%), Positives = 298/658 (45%), Gaps = 91/658 (13%)

Query: 59   ILRHAISTSDLLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            +L+  ++  D   G++ H  ++ S  +   D F  N L+ MY++ G    A R+FD +P+
Sbjct: 434  LLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPE 493

Query: 117  RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            R+++S+ +++  +A  GE       E   LF+ LR      ++  L  +LKL ++   + 
Sbjct: 494  RNMVSFVTLVQGHALRGE-----FEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLG 548

Query: 177  ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             +  VH  A K+G   + FV  AL++ YS  G + +A+ +FDG+  +D V W  M+  Y+
Sbjct: 549  LAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYS 608

Query: 237  ENGFGEEVFHLFVDLHRS-------GLCPDDESVQCVLGVISDLGK---------RHEEQ 280
            EN   E    +F  +  +        L     +  C+  V+  LGK          ++ +
Sbjct: 609  ENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVV--LGKGIHACSVKTLYDTE 666

Query: 281  VQAYAIKLLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
               Y   L +Y                 N +V+LW+  +S Y Q   N  A E F+ M+R
Sbjct: 667  RHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMR 726

Query: 326  SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------ 379
            S+V  +  +    L A A    L+LG+QIH   +K G  S + VGN+LI++Y+K      
Sbjct: 727  SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMES 786

Query: 380  -MGCVCGLR------------------------------------TDQFTLASVLRASSS 402
             +     LR                                    + Q T +SVLRA +S
Sbjct: 787  SLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACAS 846

Query: 403  LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                 H+  Q+H    K+   +D+ VS +LID Y + G + +A  +FE     DL +WNA
Sbjct: 847  TASINHVG-QVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNA 905

Query: 463  MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKS 521
            +I GY +   +  A ELF  M  +  + ++IT    +  CG   ++ QG  +  +  +  
Sbjct: 906  IISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDH 965

Query: 522  GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
            G E  +   + I+ +  + G + DA +   DIP AP  + W  ++S C+ +  +++ L  
Sbjct: 966  GIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVH--KNVELGR 1023

Query: 581  YHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
            +   ++  + P DE T+ +L    S   +L+Q      ++  +    +P  G+S V++
Sbjct: 1024 FSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEP--GLSWVEI 1079



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 5/234 (2%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F++    S S +     S+L+   +   L LGK  H   +      + F+ N L+ +Y++
Sbjct: 721 FIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAK 780

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           C  +  +  +F  + D + +SWN+I+  Y+ SG G A        +FR +R +   ++++
Sbjct: 781 CSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEA-----ALSVFREMRAASVPSTQV 835

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T + +L+ C S+  +     VH    K     D  VS +L++ Y+K G IR+A+ +F+ +
Sbjct: 836 TYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETL 895

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +E D+V W  ++  YA +G       LF  + ++ +  +D +   +L V    G
Sbjct: 896 KECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTG 949



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)

Query: 41   FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
            F +    S  S+   + S+LR   ST+ +      H  I  S+   D  ++N+L+  Y++
Sbjct: 822  FREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAK 881

Query: 101  CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            CG +  AR +F+ + + DL+SWN+I++ YA  G+           LF  + ++    + +
Sbjct: 882  CGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQ-----ELFDMMSKNSIKANDI 936

Query: 161  TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL------VNIYSKFGKIREA- 213
            T   LL +C S+G V       G +L   +  D  +  ++      V +  + G++ +A 
Sbjct: 937  TFVALLSVCGSTGLV-----SQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDAL 991

Query: 214  KFLFDGMQERDVVLWKVML 232
             F+ D       ++W+ +L
Sbjct: 992  NFIGDIPSAPSAMVWRALL 1010


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/718 (32%), Positives = 362/718 (50%), Gaps = 97/718 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV WN  +SGY Q+G  H  +  F     S+++ D  TF  AL+    T +L LG+ IH
Sbjct: 5   NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIH 64

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
                SG    V++ NSLI+MY K G +                                
Sbjct: 65  ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSND 124

Query: 384 -----------CGLRTDQFTLASVLRA-SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                       GL  + + L S L+A  S+    +   K +H  A+K     D  V TA
Sbjct: 125 EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTA 184

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-----SHKALELFSHMHTS 486
           L+D Y + G + +A  +F+     ++  +NAMI G++         +++A+ LF  M + 
Sbjct: 185 LLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSR 244

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G +  E T ++ +KAC  +   + GKQ+HA   K   + D  + + ++++Y   G++ D 
Sbjct: 245 GMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDG 304

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
              F+  P  D V+WT++I G V NG+ +  L+++H++  SG  PDEFT +I++ A + L
Sbjct: 305 LKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANL 364

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A++ G QIHA  IK    +   +  S + MYAKCG+I+ A + FK+    + V W+ M+
Sbjct: 365 AAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMI 424

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
              AQHG  +E + LFE MK  G+ P+ +TF+GVL ACS+ GLV E    F +M++ +GI
Sbjct: 425 SSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGI 484

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P V+H + +VD LGRAGR  EA   I+   FE    M R+LL ACRV   T+TGK VAE
Sbjct: 485 TPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAE 544

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
           +++ LEP  +++YVLL NI+  A      T  R  MK + VKK+P               
Sbjct: 545 RVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFV 604

Query: 832 --------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY-YHSEKLARAY 882
                   + +I+ ++E +++ IK+  Y+ D   V    E + K+ ++  YHSEKLA  +
Sbjct: 605 AGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEKLAVTF 663

Query: 883 GLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           G+IS P S+ +                     L N+E +  +  RFH  RDG C C D
Sbjct: 664 GIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGD 721



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 218/507 (42%), Gaps = 87/507 (17%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           T DL LG+  HA I  S       LTN+L+ MY +CG + +AR +F+   + D +SWNS+
Sbjct: 54  TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 113

Query: 126 LAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLS--SGYVWASETVH 182
           +A Y   G  +     E  RL  + LR  +   S   L   LK C S  S  +   + +H
Sbjct: 114 IAGYVRIGSND-----EMLRLLVKMLRHGLNLNS-YALGSALKACGSNFSSSIECGKMLH 167

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE----- 237
           G A+K+GL  D  V  AL++ Y+K G + +A  +F  M + +VV++  M+  + +     
Sbjct: 168 GCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMA 227

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYN 292
           + F  E  +LF ++   G+ P + +   +L   S +     GK+   Q+  Y ++   + 
Sbjct: 228 DEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 287

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            N+                        +VV W   + G++Q G   G +  F  ++ S  
Sbjct: 288 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR 347

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           + D  T  + L+A A    +  G+QIH   +K+G  +  I+ NS I MY+K G       
Sbjct: 348 KPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG------- 400

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
                  +  A+ +  E             KN    D    + +I    ++G   EA  L
Sbjct: 401 ------DIDSANMTFKE------------TKN---PDIVSWSVMISSNAQHGCAKEAVDL 439

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT-----IATAVKACG 503
           FE   G  +A  N + F  +L   SH  L         G R  EI      I   VK   
Sbjct: 440 FELMKGSGIAP-NHITFLGVLVACSHGGLV------EEGLRYFEIMKKDHGITPNVKHSA 492

Query: 504 CL--LMLKQGK--QMHAYAMKSGFELD 526
           C+  L+ + G+  +  ++ M SGFE D
Sbjct: 493 CIVDLLGRAGRLAEAESFIMDSGFEGD 519



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 217/536 (40%), Gaps = 87/536 (16%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP R+++SWNS+++ Y   G        E   LF+  R S     + T +  L +C  + 
Sbjct: 1   MPKRNVVSWNSLISGYTQMG-----FYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTL 55

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +H      GL     ++ +L+++Y K G+I  A+ +F+   E D V W  ++ 
Sbjct: 56  DLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIA 115

Query: 234 AYAENGFGEEVFHLFVDLHRSGL-------------CPDD--ESVQC---VLGVISDLGK 275
            Y   G  +E+  L V + R GL             C  +   S++C   + G    LG 
Sbjct: 116 GYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 175

Query: 276 RHEEQVQAY-------------AIKLLLYNNNSNVVLWNKKLSGYLQ---VGDNHG--AI 317
             +  V                A K+     + NVV++N  ++G+LQ   + D     A+
Sbjct: 176 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 235

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  M    ++    TF   L A +  +    G+QIH    K    S   +GN+L+ +Y
Sbjct: 236 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 295

Query: 378 SKMGCV-------------------------------------------CGLRTDQFTLA 394
           S  G +                                            G + D+FT++
Sbjct: 296 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
            +L A ++L   +   +QIH +AIK      + +  + I +Y + G +  A   F+    
Sbjct: 356 IMLSACANLA-AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKN 414

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            D+ +W+ MI        + +A++LF  M  SG   + IT    + AC    ++++G + 
Sbjct: 415 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 474

Query: 515 HAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
                K  G   ++  S+ I+D+  + G + +A+S   D     D V W +++S C
Sbjct: 475 FEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 530



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 10/227 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+   +      GK  HA+I   +   D F+ N L+ +YS  GS+    + F   P  
Sbjct: 255 SILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL 314

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW S++  +  +G+        G  LF  L  S       T++ +L  C +   V +
Sbjct: 315 DVVSWTSLIVGHVQNGQFEG-----GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKS 369

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H YA+K G+     +  + + +Y+K G I  A   F   +  D+V W VM+ + A+
Sbjct: 370 GEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQ 429

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDES-----VQCVLGVISDLGKRHEE 279
           +G  +E   LF  +  SG+ P+  +     V C  G + + G R+ E
Sbjct: 430 HGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFE 476



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 4/221 (1%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + V+W ++ISG    G     ++++ + R+S +  D+FTF+  +        L  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 613 RQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           R IHA LI +     P  +  SL+DMY KCG I+ A ++F+  D  ++V WN+++ G  +
Sbjct: 61  RLIHA-LITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS-EAYENFHLMREKYGIEPEV 730
            G+ +E L+L   M  HG+  +S      L AC      S E  +  H    K G++ +V
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
              + L+D   + G  ++A ++   MP + +  M+ A++  
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 219


>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 274/920 (29%), Positives = 438/920 (47%), Gaps = 113/920 (12%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT-------EGFRLFRS 149
           MY   G++  AR+LFD+MP+R L+SW  +++ YA  G  +   +         G  L R 
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             +S  F   L    +++ CLS G       VHG  +K   V D FV  ALV++Y   G 
Sbjct: 61  --DSFVFAVVLRACGMVE-CLSYG-----RGVHGLVVKQSSVVDSFVENALVSMYGSCGA 112

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + +A  +F G+ + D+V W  +L  Y +NG  EE   +F D+   G+ PD  +   VLG 
Sbjct: 113 LEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGA 172

Query: 270 ISDLG-KRHEEQVQAYAIKL----LLYNNNS------------------------NVVLW 300
            ++L       Q   Y IK+     LY  NS                        N+V W
Sbjct: 173 CTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSW 232

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  ++GY+       A+  F  ++    Q D  + L  L AV+G  +L+ G++IHG  L+
Sbjct: 233 NTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILR 292

Query: 361 SGFYSAVIVGNSLINMYSKMGCVC-------------------GLRTDQFTLASVLRASS 401
           +G  +   V +SL++MY  +GC+                    G   D+F + S+L+  S
Sbjct: 293 AGIETNRYVVSSLLDMY--IGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCS 350

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   K  H   IK D  +DS+V ++LID+Y + G    A+ +F   +  D A W+
Sbjct: 351 -LESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWS 409

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           A+I G+  +    +AL+LF  M   G + +E T  + + AC  L  L++GK++H   ++S
Sbjct: 410 ALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRS 469

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           G+E +  V + ++++Y +      A  + + IP   +++W  +I  C+   + ++   + 
Sbjct: 470 GYESNFSVVNTLINLYSELWQHKQALKLCSMIP-DSEISWNFLIRACLGAEDYEIIHKLL 528

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
            ++++S    D  +   +  + S    L  G Q HA + K    S P +  SL+ MY+ C
Sbjct: 529 WRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSAC 588

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G  ++A   F  M  ++T  W ++L    +HG+  E L L   M+      D  TF  VL
Sbjct: 589 GKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVL 648

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP-FEA 760
           +AC+  GLV EA+  F  M+E YGIEP  EHYS +V+ LGRAG  +E  + I  +P F+ 
Sbjct: 649 NACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEEVLDFINGVPTFKL 708

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              + R LL + R+ G+ +  ++ AEKL+ LEP D SA +LL  +     +WD+    + 
Sbjct: 709 GPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLLLEQVLLTLGEWDNALKLKT 768

Query: 821 EMK-----------RKNV-----KKDPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           + K           R  +      ++PA  + AK+  +  +++E GYV D + +L + EE
Sbjct: 769 KTKSMRASSSWIEIRNRIYEFASDENPAKEVSAKLAEIEGKMEELGYVADKNHLLHNAEE 828

Query: 865 EEKERALYYHSEKLARAYGLISTP---PSSVI-----------------------LSNKE 898
           EE +    +H+E  A A+GLIS P   P  V+                       L  K+
Sbjct: 829 EEYDGVGLHHTEMKALAFGLISLPHGMPVRVVKNVRMCGDCHSACKFMSTFLERELVVKD 888

Query: 899 PLYANRFHHLRDGMCPCADN 918
           P     FHH RDG C C D 
Sbjct: 889 PY---SFHHFRDGKCSCRDT 905



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 142/615 (23%), Positives = 256/615 (41%), Gaps = 77/615 (12%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR       L  G+  H  ++  S + D F+ N L++MY  CG+L  A  +F  +   D
Sbjct: 68  VLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPD 127

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+ W+SIL+ Y  +G        EG R+F  +            + +L  C ++   W  
Sbjct: 128 LVGWSSILSGYVKNGLEE-----EGLRIFCDMVSGGIEPDAFAFSMVLGAC-TNLECWDF 181

Query: 179 ET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            T  H Y +K+G     ++  +L++ Y+K G +   + +F  M E+++V W   +  Y  
Sbjct: 182 GTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVH 241

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSN 296
           N    E   +F  L       DD S+  +L  +S LG   H +++  Y ++  +  N   
Sbjct: 242 NFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYV 301

Query: 297 VVLWNKKLSGYLQVGDN---HGAIECFVNMIR--SNVQYDSVTFLVALAAVAGTDNLNLG 351
           V   +  L  Y+   D+   +  +E  + ++       YD       L   +   +L  G
Sbjct: 302 V---SSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLESG 358

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKM------------------------------- 380
           +  H   +K    S   V +SLI+MYSK                                
Sbjct: 359 KMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWN 418

Query: 381 GCVC------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           GC              G++ ++FT  SV+ A  +L E L   K++H   +++   ++  V
Sbjct: 419 GCFAEALKLFRKMQFDGIKANEFTFTSVILACLAL-ENLRKGKELHCKILRSGYESNFSV 477

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLA--------TWNAMIFGYILSNNSHKALELF 480
              LI++Y           L+++K    L         +WN +I   + + +     +L 
Sbjct: 478 VNTLINLYSE---------LWQHKQALKLCSMIPDSEISWNFLIRACLGAEDYEIIHKLL 528

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             +  S   LD ++      +C   ++L  G Q HAY  K G      +S+ ++ MY  C
Sbjct: 529 WRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSAC 588

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G   +A   FN +P  D  +WT+++S  V++G    AL++  QMR      D+ TF  ++
Sbjct: 589 GKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVL 648

Query: 601 KASSCLTALEQGRQI 615
            A + +  +++  ++
Sbjct: 649 NACAQMGLVDEAFRL 663



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 87/177 (49%), Gaps = 6/177 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+     S L  GK  H+ I+      D ++ ++L+ MYS+CG    A+R+F ++   
Sbjct: 344 SLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQP 403

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D   W+++++ ++ +G        E  +LFR ++      +  T   ++  CL+   +  
Sbjct: 404 DTAPWSALISGHSWNG-----CFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRK 458

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            + +H   L+ G   +  V   L+N+YS+  + ++A  L   + + ++  W  ++RA
Sbjct: 459 GKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEIS-WNFLIRA 514



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 136/357 (38%), Gaps = 67/357 (18%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC--GSLVYARRLFDKM 114
            SIL+       L  GK  H  IL +    +R++ ++L+ MY  C     +Y R    ++
Sbjct: 268 LSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLYPRV---EV 324

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P +        L  Y   G         G+  F              +  LLK C     
Sbjct: 325 PLK--------LLNYLEGG---------GYDEF-------------IMTSLLKWCSLESS 354

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           + + +  H   +K+ L  D +V  +L+++YSK G    AK +F  +++ D   W  ++  
Sbjct: 355 LESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISG 414

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           ++ NG   E   LF  +   G+  ++ +   V  +++ L   +  + +    K+L     
Sbjct: 415 HSWNGCFAEALKLFRKMQFDGIKANEFTFTSV--ILACLALENLRKGKELHCKILRSGYE 472

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY------------------------ 330
           SN  + N  ++ Y ++  +  A++    +  S + +                        
Sbjct: 473 SNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWNFLIRACLGAEDYEIIHKLLWRIQ 532

Query: 331 ------DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
                 D V+     A+ +    LN+G Q H    K G  S   + NSLI MYS  G
Sbjct: 533 VSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACG 589


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 262/847 (30%), Positives = 390/847 (46%), Gaps = 158/847 (18%)

Query: 160 LTLAPLLKLCLS--------SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           L+L+ LL+LC +        S   + ++ VH   +K GLV+  ++   L+N+YSK G   
Sbjct: 7   LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYAL 66

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A+ LFD M  R    W  +L AYA+ G  +     F  L      P  +SV        
Sbjct: 67  HARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRL------PQRDSVS------- 113

Query: 272 DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                                       W   + GY  +G  H AI     M+R  ++  
Sbjct: 114 ----------------------------WTTMIVGYKNIGQYHKAIRIMGEMMREGIEPS 145

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
             T    LA+VA T  L  G+++H   +K G    V V NSL+NMY+K    CG      
Sbjct: 146 QFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK----CG----DP 197

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
            +A V+                         V D     A+I ++ + G M  A   FE 
Sbjct: 198 MMAKVV--------------------FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQ 237

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQ 510
               D+ TWN+MI GY       +AL++FS M   S    D  T+A+ + AC  L  L  
Sbjct: 238 MAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCI 297

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGA---------------------------- 542
           G+Q+H++ + +GF++   V + ++ MY +CG                             
Sbjct: 298 GEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 543 -----MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
                M +A++IF+ +   D VAWT MI G   +G    A++++  M      P+ +T A
Sbjct: 358 IKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLA 417

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM- 656
            ++  +S L +L  G+QIH + +K        V  +L+ MYAK G+I  A   F  +   
Sbjct: 418 AMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCE 477

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           R+TV W +M++ LAQHG+ EE L+LFE M   G+ PD +T++GV SAC++ GLV++  + 
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F +M++   I P + HY+ +VD  GRAG  +EA E I  MP E       +LL ACRV  
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYK 597

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---- 832
           + + GK  AE+L+ LEP +S AY  L+N+++A  +W++    R  MK   VKK+      
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

Query: 833 -------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                              + I+  ++ +   IK+ GYVPDT  VL D+EEE KE+ L +
Sbjct: 658 EVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717

Query: 874 HSEKLARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRD 910
           HSEKLA A+GLISTP  + +   K     N                       RFHH +D
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777

Query: 911 GMCPCAD 917
           G C C D
Sbjct: 778 GFCSCRD 784



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 244/618 (39%), Gaps = 184/618 (29%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            H R++ S  +   +L NNLM +YS+ G  ++AR+LFD+MP R   SWN++L+AYA  G+
Sbjct: 36  VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95

Query: 135 GNA-----------------------ENVTEGFRLFR----SLRESITFTSRLTLAPLLK 167
            ++                       +N+ +  +  R     +RE I   S+ TL  +L 
Sbjct: 96  MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE-PSQFTLTNVLA 154

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD--------- 218
              ++  +   + VH + +K+GL  +  VS +L+N+Y+K G    AK +FD         
Sbjct: 155 SVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISS 214

Query: 219 ----------------------GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SG 255
                                  M ERD+V W  M+  Y + G+      +F  + R S 
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSM 274

Query: 256 LCPDDESVQCVLGVISDLGKRH-EEQVQAYAI---------------------------- 286
           L PD  ++  VL   ++L K    EQ+ ++ +                            
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334

Query: 287 KLLLYNNNSNVVL--WNKKLSGYLQVGD---------------------------NHG-- 315
           +L+      ++ +  +   L GY+++GD                            HG  
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLY 394

Query: 316 --AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             AI  F +M+    + +S T    L+  +   +L  G+QIHG+ +KSG   +V V N+L
Sbjct: 395 GEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNAL 454

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I MY+K G +                          S+   +   + DTV+     T++I
Sbjct: 455 ITMYAKAGSITS-----------------------ASRAFDLIRCERDTVS----WTSMI 487

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
               ++G   E                               ALELF  M   G R D I
Sbjct: 488 IALAQHGHAEE-------------------------------ALELFETMLMEGLRPDHI 516

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFN 551
           T      AC    ++ QG+Q +   MK   ++   +S  + ++D++ + G + +AQ    
Sbjct: 517 TYVGVFSACTHAGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575

Query: 552 DIP-APDDVAWTTMISGC 568
            +P  PD V W +++S C
Sbjct: 576 KMPIEPDVVTWGSLLSAC 593



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 39/236 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL------- 110
           S+L    +   L +G+  H+ I+ +       + N L++MYSRCG +  ARRL       
Sbjct: 284 SVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343

Query: 111 --------------------------FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
                                     FD + DRD+++W +++  Y   G        E  
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGL-----YGEAI 398

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LFRS+       +  TLA +L +  S   +   + +HG A+K G ++   VS AL+ +Y
Sbjct: 399 NLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMY 458

Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +K G I  A   FD ++ ERD V W  M+ A A++G  EE   LF  +   GL PD
Sbjct: 459 AKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 155/386 (40%), Gaps = 90/386 (23%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    +T  L  GK  H+ I+      +  ++N+L+ MY++CG  + A+ +FD+M  +
Sbjct: 151 NVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVK 210

Query: 118 DLISWNSILAAYAHSGE-----GNAENVTE----------------GFRLF------RSL 150
           D+ SWN+++A +   G+        E + E                G+ L       + L
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKML 270

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS----- 205
           R+S+    R TLA +L  C +   +   E +H + +  G      V  AL+++YS     
Sbjct: 271 RDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330

Query: 206 ----------------------------KFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
                                       K G + EAK +FD +++RDVV W  M+  Y +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQ 390

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK--------- 287
           +G   E  +LF  +      P+  ++  +L V S L    H +Q+   A+K         
Sbjct: 391 HGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSV 450

Query: 288 ----LLLYNNNSNV----------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
               + +Y    ++                V W   +    Q G    A+E F  M+   
Sbjct: 451 SNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ 353
           ++ D +T++   +A      +N G+Q
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ 536


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 257/844 (30%), Positives = 398/844 (47%), Gaps = 154/844 (18%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           TS    A +L+  +     +A  +VH   +K GL    ++   L+  Y+K G +R A  +
Sbjct: 8   TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD M  +    W  ++  YA+ G  E    L  ++      PD + V             
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEM------PDCDPVS------------ 109

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                  W   + GY Q G    AI  F  MI   V     T  
Sbjct: 110 -----------------------WTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVS 146

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--CVCGLRTDQFTLA 394
             L++ A    L++G++IH   +K G  S V V  SL+NMY+K G   +  +  D+ T  
Sbjct: 147 NVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT-- 204

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
                                  +KN +  +     ALI +Y ++G    A   FE    
Sbjct: 205 -----------------------VKNISTWN-----ALISLYMQSGQFELAASQFEKMPD 236

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQ 513
            D+ +WN+MI GY     + +AL +FS M +    + D  T+A+ + AC  L  L  GKQ
Sbjct: 237 RDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296

Query: 514 MHAYAMKSGFE---------------------------------LDLCVSSGILDMYVKC 540
           +HAY +++  E                                 L++   + +LD Y K 
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G +  A+ IFN +   D VAWT MI G V NG  + AL ++  M   G  P+ +T A ++
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
             SS LT LE G+QIHA+ IK   SS P V  +L+ MYAK GNI  A  +F   + +  +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476

Query: 661 L-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           + W +M++ LAQHG G+E + LFE M + G++PD +T++GVLSAC++ GLV +  + +++
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM 536

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M E + IEP + HY+ ++D  GRAG  +EA   I SMP E       +LL +C++  + +
Sbjct: 537 MTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD 596

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
             K  AE+L+ ++P +S AY+ L+N+++A  +W++    R  MK + V+K+         
Sbjct: 597 LAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIK 656

Query: 833 ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                           D I+  +  + + IK+ G++PDT+ VL D+EEE KE+ L YHSE
Sbjct: 657 NEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSE 716

Query: 877 KLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMC 913
           KLA A+GL++TP ++ +                     L  +E +   A RFHH +DG C
Sbjct: 717 KLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSC 776

Query: 914 PCAD 917
            C D
Sbjct: 777 SCRD 780



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 141/653 (21%), Positives = 260/653 (39%), Gaps = 183/653 (28%)

Query: 49  SSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           +S +SS++F+ IL+ ++   D   G+S H +I+        +L NNLMT Y++ GSL +A
Sbjct: 5   NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFA 64

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEGNAEN----------------VTEGFRLFRSLR 151
             +FD+MP +   SWN++++ YA  G                      +  G+  F    
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124

Query: 152 ESITF----------TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
            +I             S+ T++ +L  C ++  +     +H + +K+GL     V+ +L+
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184

Query: 202 NIYSKFGKIREAKFLFD-------------------------------GMQERDVVLWKV 230
           N+Y+K G    AK +FD                                M +RD+V W  
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244

Query: 231 MLRAYAENGFGEEVFHLFVD-LHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAI-- 286
           M+  Y++ G+  E   +F   L+   L PD+ ++  +L   ++L K +  +Q+ AY +  
Sbjct: 245 MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304

Query: 287 -------------------------KLLLYNN---NSNVVLWNKKLSGYLQVGDN----- 313
                                    +L++ +N   N N++ +   L GY ++G+      
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364

Query: 314 --------------------------HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                                     + A+E F  M+    + +S T    L+  +    
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           L  G+QIH + +K+G  S   V N+LI MY+K G +           +V +    LP G 
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNI-----------NVAKRVFDLPNG- 472

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
              K+I                                             +W +MI   
Sbjct: 473 --KKEI--------------------------------------------VSWTSMIMAL 486

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
                  +A+ LF  M + G + D IT    + AC  + +++QG++ +   M    E++ 
Sbjct: 487 AQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM-MTEVHEIEP 545

Query: 528 CVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            +S  + ++D+Y + G + +A      +P  PD++AW ++++ C  +   DLA
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 244/782 (31%), Positives = 383/782 (48%), Gaps = 103/782 (13%)

Query: 179 ETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + +H + + +G    D F+   L++ YSK     +A+ LFD M  R++V W  M+  Y +
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 238 NGFGEEVFHLFVDLHRSGLC---PDDESVQCVLGVISDLGKRHEE-QVQAYAIK------ 287
           +G+  E   LF    RS  C   P++  +  V+   + LG   +  Q+  + +K      
Sbjct: 131 HGYSVEALLLFCRFMRS--CSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQD 188

Query: 288 --------------------LLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                L+++       V W   ++GY ++G +  +++ F  M  
Sbjct: 189 VYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMRE 248

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------ 379
            +V  D       L+A +  + L  G+QIHG  L+ GF   V V N +I+ Y K      
Sbjct: 249 GDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKT 308

Query: 380 --------------------MGCVC-----------------GLRTDQFTLASVLRASSS 402
                                GC+                  G + D F   SVL +  S
Sbjct: 309 GRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGS 368

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L + L   +Q+H +AIK +   D FV   LID+Y +  S+  A  +F+     ++ ++NA
Sbjct: 369 L-QALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNA 427

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY   +   +AL+LF  M  S      +T  + +     L +L+   Q+H   +K G
Sbjct: 428 MIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFG 487

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
             LD    S ++D+Y KC  + DA+ +F +I   D V W  M SG     E + +L +Y 
Sbjct: 488 VSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYK 547

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            +++S + P+EFTFA ++ A+S + +L  G+Q H  +IK+    DPFV  SLVDMYAKCG
Sbjct: 548 DLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCG 607

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           +IE+++  F   + R+   WN+M+   AQHG+  + L++FE M   GV+P+ VTF+G+LS
Sbjct: 608 SIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLS 667

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           ACS+ GL+   + +F  M  K+GIEP ++HY+ +V  LGRAG+  EA E +  MP + +A
Sbjct: 668 ACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAA 726

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
            + R+LL ACRV G  E G + AE  ++ +P DS +Y+LLSNIFA+   W  V   R +M
Sbjct: 727 VVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKM 786

Query: 823 KRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
               V K+P                       + LI   ++ LI +IK  GYVP+     
Sbjct: 787 DMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYVPNAATFF 846

Query: 860 LD 861
           LD
Sbjct: 847 LD 848



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 191/741 (25%), Positives = 309/741 (41%), Gaps = 95/741 (12%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSS-------SSSSSQWFSILRHAISTSDLLLG 72
           F    KD       FS  L PFLQ  H S             +   +    I TS     
Sbjct: 14  FKFLNKDNVSQTLHFSTLLPPFLQ-PHDSPILIQRKIGRELGKLLQLPSPNILTSHYYKK 72

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
              H  +L   Q  D FL N L+  YS+      A++LFD MP R+L++W+S+++ Y   
Sbjct: 73  IHAHIVVLGFHQ-HDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQH 131

Query: 133 GEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           G        E   LF R +R      +   LA +++ C   G +  +  +HG+ +K G V
Sbjct: 132 GYS-----VEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFV 186

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  +L++ Y+K G + EA+ +FDG++ +  V W  ++  YA+ G  E    LF  +
Sbjct: 187 QDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM 246

Query: 252 HRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIK------------------- 287
               + PD   +  VL   S L     GK    Q+  Y ++                   
Sbjct: 247 REGDVYPDRYVISSVLSACSMLEFLEGGK----QIHGYVLRRGFDMDVSVVNGIIDFYLK 302

Query: 288 -------LLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                    L+N   + +VV W   ++G +Q   +  A++ FV M+R   + D+      
Sbjct: 303 CHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSV 362

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR----------- 387
           L +      L  G+Q+H   +K    +   V N LI+MY+K   +   R           
Sbjct: 363 LNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINV 422

Query: 388 ----------------TDQFTLASVLRASSSLPEGLHL---------------SKQIHVH 416
                            +   L   +R S S P  L                 S QIH  
Sbjct: 423 VSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCL 482

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            IK     DSF  +ALIDVY +   + +A  +FE     D+  WNAM  GY     + ++
Sbjct: 483 IIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEES 542

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           L+L+  +  S  + +E T A  + A   +  L+ G+Q H   +K G + D  V++ ++DM
Sbjct: 543 LKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDM 602

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y KCG++ ++   F+     D   W +MIS    +G+   AL ++ +M + GV P+  TF
Sbjct: 603 YAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTF 662

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             L+ A S    L+ G     ++ K            +V +  + G I +A    K+M +
Sbjct: 663 VGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPI 722

Query: 657 RN-TVLWNAMLVGLAQHGNGE 676
           +   V+W ++L      G+ E
Sbjct: 723 KPAAVVWRSLLSACRVSGHVE 743



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 254/597 (42%), Gaps = 87/597 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R      +L      H  ++    + D ++  +L+  Y++ G +  AR +FD +  +
Sbjct: 159 SVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVK 218

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W +I+A YA  G           +LF  +RE   +  R  ++ +L  C    ++  
Sbjct: 219 TTVTWTAIIAGYAKLGRSEVS-----LKLFNQMREGDVYPDRYVISSVLSACSMLEFLEG 273

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HGY L+ G   D  V   +++ Y K  K++  + LF+ + ++DVV W  M+    +
Sbjct: 274 GKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQ 333

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN-- 294
           N F  +   LFV++ R G  PD      VL     L    +  QV AYAIK+ + N++  
Sbjct: 334 NSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFV 393

Query: 295 --------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      NVV +N  + GY +      A++ F  M  S  
Sbjct: 394 KNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLS 453

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
               +TF+  L   +    L L  QIH   +K G       G++LI++YSK  CV     
Sbjct: 454 PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARL 513

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                   L+ ++FT A+V+ A+S++  
Sbjct: 514 VFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIAS 573

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
             H  +Q H   IK     D FV+ +L+D+Y + GS+ E+   F + +  D+A WN+MI 
Sbjct: 574 LRH-GQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMIS 632

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHAYAMKS 521
            Y    ++ KALE+F  M   G + + +T    + AC    +L  G    + M  + ++ 
Sbjct: 633 TYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEP 692

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           G +   C+ S    +  + G + +A+     +P  P  V W +++S C  +G  +L 
Sbjct: 693 GIDHYACMVS----LLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELG 745



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 178/358 (49%), Gaps = 14/358 (3%)

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
           N+ Q +H +TL   F       +S I +  K+G   G +  Q    ++L +        H
Sbjct: 21  NVSQTLHFSTLLPPFLQP---HDSPILIQRKIGRELG-KLLQLPSPNILTS--------H 68

Query: 409 LSKQIHVH-AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
             K+IH H  +      D F+   L+  Y +    ++A+ LF+     +L TW++M+  Y
Sbjct: 69  YYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMY 128

Query: 468 ILSNNSHKALELFSH-MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
                S +AL LF   M +  E+ +E  +A+ V+AC  L  L Q  Q+H + +K GF  D
Sbjct: 129 TQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQD 188

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           + V + ++D Y K G + +A+ IF+ +     V WT +I+G    G  +++L +++QMR 
Sbjct: 189 VYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMRE 248

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
             V PD +  + ++ A S L  LE G+QIH  +++     D  V   ++D Y KC  ++ 
Sbjct: 249 GDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKT 308

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
              LF ++  ++ V W  M+ G  Q+    + + LF +M   G +PD+     VL++C
Sbjct: 309 GRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSC 366


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 259/843 (30%), Positives = 406/843 (48%), Gaps = 123/843 (14%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+  G+  H  +  +      F    L+ MY++C  L  AR +FD   + D +SW +++A
Sbjct: 157 DVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIA 216

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y          V +GF +     E++    R+                          +
Sbjct: 217 GY----------VRDGFPM-----EAVKVFDRMQ-------------------------R 236

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G   D+     +VN Y   G++ +A+ LF  +   +VV W VM+  +A+ GF EE    
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN------------- 293
           F++L ++GL     S+  VL  I+ L    +   V A A K  L +N             
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            N+VLWN  L G+ Q G     +E F  M R   Q D  TF   
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSI 416

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
            +A A    LN G Q+H   +K+ F S + V N+L++MY+K G +               
Sbjct: 417 FSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN 476

Query: 384 ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G+  D+ +LAS++ A +++ E L   +Q H 
Sbjct: 477 VSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE-LKRGQQCHC 535

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             +K      +   ++LID+Y + G +  A  +F +    ++ + NA+I GY + +   +
Sbjct: 536 LLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGH-LEE 594

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF----ELDLCVSS 531
           A+ LF  +   G +  E+T A  +  C    ML  G+Q+H   MK GF    E+ +CVS 
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM-VCVS- 652

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            +L +Y+     VD++++F+++  P   V WT +ISG       + AL  Y  MR   ++
Sbjct: 653 -LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+  FA +++A + +++L+ G++IH+ +     + D     SL+DMYAKCG+++ +  +
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 651 FKQMDMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           F++M  RN V+ WN+M+VGLA++G  EE L++F+ M+   + PD VTF+GVLSACS+ G 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           VSE  + F LM   Y + P V+H   +VD LGR G   EA E I  +  +A   +   LL
Sbjct: 832 VSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLL 891

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR  GD   GK  A+KLM L+P  SS+YVLLS+I+A +  W    S R EMK K VKK
Sbjct: 892 GACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKK 951

Query: 830 DPA 832
            P 
Sbjct: 952 LPG 954



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 206/748 (27%), Positives = 350/748 (46%), Gaps = 78/748 (10%)

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
            A+ST+     K  H++ L         L N ++ +Y +CG++ +A++ F ++  +D+ +
Sbjct: 55  QALSTA-----KVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFA 109

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-------TSRLTLAPLLKLCLSSGY 174
           WNS+L+ Y   G            LF ++ +S           +  T A +L  C     
Sbjct: 110 WNSVLSMYLDHG------------LFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQD 157

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V     VH    K G  +  F  G L+++Y+K   +R+A+ +FDG    D V W  ++  
Sbjct: 158 VNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAG 217

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +GF  E   +F  + R G  PD  ++  V+     LG+       A A KL     N
Sbjct: 218 YVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRL------ADARKLFTQIPN 271

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            NVV WN  +SG+ + G    AI  F+ + ++ ++    +    L+A+A    LN G  +
Sbjct: 272 PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV 331

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSK----------------------------------- 379
           H    K G    V VG++L+NMY+K                                   
Sbjct: 332 HAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA 391

Query: 380 ------MGCVC--GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                   C+   G + D+FT  S+  A +SL   L+   Q+H   IKN   ++ FV+ A
Sbjct: 392 QEVMEFFSCMKRHGPQPDEFTFTSIFSACASL-HYLNFGGQLHTVMIKNKFASNLFVANA 450

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y ++G++ EA   FE     D  +WNA+I GY+    + +A  +F  M ++G   D
Sbjct: 451 LVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E+++A+ V AC  +  LK+G+Q H   +K G +   C  S ++DMYVKCG ++ A+ +F 
Sbjct: 511 EVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P+ + V+   +I+G    G  + A+ ++ ++++ G+ P E TFA L+        L  
Sbjct: 571 SMPSRNVVSVNALIAG-YTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629

Query: 612 GRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGL 669
           GRQIH  ++K    SS   V +SL+ +Y       D+  LF ++   +  V+W A++ G 
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGY 689

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQ  + E+ L+ ++ M++  + PD   F  VL AC+    +    E  H +    G   +
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQE-IHSLIFHTGFNMD 748

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMP 757
               S L+D   + G  K + ++   MP
Sbjct: 749 EVTCSSLIDMYAKCGDVKGSLQVFREMP 776



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 302/681 (44%), Gaps = 103/681 (15%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R     ++S    L+K+   ++ SS    S+L    S S L  G   HA+        + 
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLG--SVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           ++ + L+ MY++C  +  A+++F+ + +R+++ WN++L  +A +G   A+ V E    F 
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL--AQEVME---FFS 399

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            ++         T   +   C S  Y+     +H   +K     + FV+ ALV++Y+K G
Sbjct: 400 CMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSG 459

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            ++EA+  F+ M+  D V W  ++  Y +  + +E F +F  +  +G+ PD+ S+  ++ 
Sbjct: 460 ALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519

Query: 269 VISDLGK-RHEEQVQAYAIKL---------------------------LLYNNNS-NVVL 299
             +++ + +  +Q     +K+                           + Y+  S NVV 
Sbjct: 520 ACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVS 579

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
            N  ++GY  +G    AI  F  +    ++   VTF   L    G   LNLG+QIHG  +
Sbjct: 580 VNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM 638

Query: 360 KSGFYSAV-IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           K GF S+  +V  SL+ +Y        + + +F  +  L +    P+GL           
Sbjct: 639 KWGFLSSSEMVCVSLLCLY--------MNSQRFVDSETLFSELQYPKGL----------- 679

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                                                    W A+I GY   N+  KAL+
Sbjct: 680 ---------------------------------------VVWTALISGYAQQNHHEKALQ 700

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            + HM +     D+   A+ ++AC  +  L+ G+++H+    +GF +D    S ++DMY 
Sbjct: 701 FYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYA 760

Query: 539 KCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           KCG +  +  +F ++P  ++V +W +MI G   NG  + AL I+ QM    ++PDE TF 
Sbjct: 761 KCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFL 820

Query: 598 ILVKASSCLTALEQGRQIH---ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            ++ A S    + +GR++     N  KL    D      +VD+  + G + +A     ++
Sbjct: 821 GVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLG--CMVDILGRWGFLNEAEEFINKL 878

Query: 655 DMR-NTVLWNAMLVGLAQHGN 674
             + + +LW+ +L    +HG+
Sbjct: 879 GCKADPMLWSTLLGACRKHGD 899



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 223/551 (40%), Gaps = 99/551 (17%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SI     S   L  G   H  ++ +    + F+ N L+ MY++ G+L  AR+ F+ M   
Sbjct: 415 SIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIH 474

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWN+I+  Y        E   E F +FR +  +      ++LA ++  C +   +  
Sbjct: 475 DNVSWNAIIVGYVQE-----EYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKR 529

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            +  H   +K+GL        +L+++Y K G +  A+ +F  M  R+VV    ++  Y  
Sbjct: 530 GQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM 589

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL-----GVISDLGKRHEEQVQAYAIK----- 287
            G  EE  HLF ++   GL P + +   +L       + +LG++   QV  +        
Sbjct: 590 -GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM 648

Query: 288 -----LLLYNNNS----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                L LY N+                  +V+W   +SGY Q   +  A++ + +M   
Sbjct: 649 VCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSD 708

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           N+  D   F   L A AG  +L  GQ+IH     +GF    +  +SLI+MY+K G V G 
Sbjct: 709 NILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKG- 767

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                     L+    +P              +N+ ++      ++I    +NG   EA 
Sbjct: 768 ---------SLQVFREMPR-------------RNNVIS----WNSMIVGLAKNGYAEEA- 800

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
                                         LE+F  M       DE+T    + AC    
Sbjct: 801 ------------------------------LEIFKQMEQQSIIPDEVTFLGVLSACSHAG 830

Query: 507 MLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTT 563
            + +G+++    M + ++L   V     ++D+  + G + +A+   N +    D + W+T
Sbjct: 831 RVSEGRKVFDL-MVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWST 889

Query: 564 MISGCVDNGEE 574
           ++  C  +G+E
Sbjct: 890 LLGACRKHGDE 900



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 11/328 (3%)

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L   K +H+ ++K G  L   + + I+D+YVKCG +  AQ  F+ +   D  AW ++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +S  +D+G     +  +  M    V P+EFTFA+++ A S L  +  GRQ+H  + K   
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
               F    L+DMYAKC  + DA ++F      +TV W A++ G  + G   E +K+F+ 
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G  PD +T + V++A    G +++A + F  +       P V  ++ ++    + G
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRG 288

Query: 745 RTKEAGELILSMP---FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV- 800
             +EA    L +     +A+ S   ++L A         G  V  +    E  D + YV 
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATK-EGLDDNVYVG 347

Query: 801 -LLSNIFAAANQWDDVTSARGEMKRKNV 827
             L N++A  ++ D        +  +N+
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNI 375



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%)

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
           K    L AL   + IH+  +K+       +G  +VD+Y KCGN++ A   F +++ ++  
Sbjct: 49  KPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            WN++L     HG     ++ F  M  H V P+  TF  VLSACS
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS 153


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/581 (36%), Positives = 322/581 (55%), Gaps = 49/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  D +T   VL A + L   + L ++ H   +KN   +D FV  ALI  Y   GS   
Sbjct: 106 GVPVDNYTYPFVLAACARLG-AVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGC 164

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACG 503
           A  +F+     D+ TWN MI  ++    S KA +L   M      R DE+T+ + V AC 
Sbjct: 165 ACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L++GK +H+Y+ + G + +L V++ ILDMY KC  +  AQ +FN I   D ++WT+
Sbjct: 225 QLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTS 284

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           M+SG   +G    AL+++ +M+L+ +  DE T   ++ A +   AL+QG+ IH  + K +
Sbjct: 285 MLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFE 344

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
            + D  +  +LVDMYAKCG+I+ A  +F++M +RN   WNA++ GLA HG+GE+ + LF+
Sbjct: 345 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFD 404

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M+   + PD VTFI +L ACS+ GLV E    F  M+ K+ IEP +EHY  +VD L RA
Sbjct: 405 QMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 464

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
            +  +A   I +MP +A++ +   LLGACR  G  +  + +  +++ LEP     YV+LS
Sbjct: 465 RKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLS 524

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           N++A  +QWD     R +MK K ++K P                        + I+A +E
Sbjct: 525 NLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 584

Query: 841 GLIKRIK-EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
            + +R+  +GG+VP T  VL D+EEEEKE +L+ HSEKLA A GLISTP  S I      
Sbjct: 585 EMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNL 644

Query: 894 ---------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                          + N+E +  +  RFHH ++G C C D
Sbjct: 645 RVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMD 685



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 188/373 (50%), Gaps = 5/373 (1%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYC--RNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           +KQ H   ++   + +   S+ LI       +G +  A  LF      D    N MI GY
Sbjct: 27  TKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGY 86

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
             S N ++A+ L+  M   G  +D  T    + AC  L  +K G++ H   +K+GF  DL
Sbjct: 87  ARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDL 146

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RL 586
            V + ++  Y  CG+   A  +F++    D V W  MI+  ++ G  + A  +  +M +L
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKL 206

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
             + PDE T   LV A + L  LE+G+ +H+   +L    +  V  +++DMY KC +IE 
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIES 266

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  +F ++  ++ + W +ML GLA+ G  +E L LF+ M+ + +E D +T +GVLSAC+ 
Sbjct: 267 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
           TG + +  +  HL+ +K+ I  ++   + LVD   + G    A ++   M      + + 
Sbjct: 327 TGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWN- 384

Query: 767 ALLGACRVQGDTE 779
           AL+G   + G  E
Sbjct: 385 ALIGGLAMHGHGE 397



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 204/459 (44%), Gaps = 53/459 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA KL     N +  + N  + GY +  + + A+  +  M+   V  D+ T+   LAA A
Sbjct: 63  YARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACA 122

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY---SKMGCVC---------------- 384
               + LG++ H   LK+GF S + V N+LI  Y      GC C                
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182

Query: 385 -------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                     LR D+ T+ S++ A + L   L   K +H ++ +
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG-NLERGKFLHSYSKE 241

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                +  V+ A++D+YC+   +  A+ +F      D+ +W +M+ G   S    +AL L
Sbjct: 242 LGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALAL 301

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M  +   LDEIT+   + AC     L QGK +H    K     DL + + ++DMY K
Sbjct: 302 FQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAK 361

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG++  A  +F  +   +   W  +I G   +G  + A+S++ QM    ++PD+ TF  L
Sbjct: 362 CGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIAL 421

Query: 600 VKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           + A S    +++G    Q   N  +++   + +  +  VD+  +   ++DA    + M +
Sbjct: 422 LCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCV--VDLLCRARKVDDALAFIENMPI 479

Query: 657 R-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           + N+VLW A L+G  + G G   L      +   +EPDS
Sbjct: 480 KANSVLW-ATLLGACRSG-GHFDLAEKIGRRVIELEPDS 516



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 122/543 (22%), Positives = 210/543 (38%), Gaps = 100/543 (18%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMY--SRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA +L +  + +   ++ L++    S  G L YAR+LF +M + D    N+++  YA
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            S     +N  E   L+  + E        T   +L  C   G V      H   LK G 
Sbjct: 88  RS-----QNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D FV  AL+  Y   G    A  +FD    RDVV W +M+ A+   G  E+ F L  +
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202

Query: 251 LHR-SGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLLYNN--------------- 293
           + +   L PD+ ++  ++   + LG     + + +Y+ +L L  N               
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCD 262

Query: 294 -------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                          +V+ W   LSG  + G    A+  F  M  + ++ D +T +  L+
Sbjct: 263 DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLS 322

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A A T  L+ G+ IH    K      +++  +L++MY+K G                   
Sbjct: 323 ACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCG------------------- 363

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
            S+   L + +++ V  +        F   ALI                           
Sbjct: 364 -SIDLALQVFRRMRVRNV--------FTWNALIG-------------------------- 388

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
                G  +  +   A+ LF  M       D++T    + AC    ++ +G  M   AMK
Sbjct: 389 -----GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMK 442

Query: 521 SGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           + F+++  +     ++D+  +   + DA +   ++P   + V W T++  C   G  DLA
Sbjct: 443 NKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLA 502

Query: 578 LSI 580
             I
Sbjct: 503 EKI 505



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 35/303 (11%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H  +L +    D F+ N L+  Y  CGS   A  +FD+   RD+++WN ++ A+ 
Sbjct: 129 LGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHL 188

Query: 131 HSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           + G    A ++ +      +LR        +T+  L+  C   G +   + +H Y+ ++G
Sbjct: 189 NKGLSEKAFDLLDEMTKLDNLR-----PDEVTMVSLVPACAQLGNLERGKFLHSYSKELG 243

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  +  V+ A++++Y K   I  A+ +F+ ++E+DV+ W  ML   A++G+ +E   LF 
Sbjct: 244 LDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQ 303

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQ---------------------VQAY---- 284
            +  + +  D+ ++  VL   +  G   + +                     V  Y    
Sbjct: 304 KMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCG 363

Query: 285 ----AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
               A+++       NV  WN  + G    G    AI  F  M    +  D VTF+  L 
Sbjct: 364 SIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC 423

Query: 341 AVA 343
           A +
Sbjct: 424 ACS 426



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 11/185 (5%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L     T  L  GK  H  I       D  L   L+ MY++CGS+  A ++F +M  R+
Sbjct: 320 VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 379

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           + +WN+++   A  G G      +   LF  +         +T   LL  C  +G V   
Sbjct: 380 VFTWNALIGGLAMHGHGE-----DAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            A         +I    + +  G +V++  +  K+ +A    + M  + + VLW  +L A
Sbjct: 435 LAMFQAMKNKFQIEPRMEHY--GCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 492

Query: 235 YAENG 239
               G
Sbjct: 493 CRSGG 497


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/708 (32%), Positives = 352/708 (49%), Gaps = 91/708 (12%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           L++  L GY +      A+  F  M    V+     F   L       +L  G++IH   
Sbjct: 142 LYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQL 201

Query: 359 LKSGFYSAVIVGNSLINMYSK----------------MGCVC------------------ 384
           + +GF S V     ++NMY+K                   VC                  
Sbjct: 202 IVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTAL 261

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G R D  T+ S+L A + +   L + + IH ++++    +   VSTAL+D+
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPAVADV-GSLRIGRSIHGYSMRAGFESFVNVSTALVDM 320

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + GS+  A  +F+   G  + +WN+MI GY+ + +   A+E+F  M      +  +T+
Sbjct: 321 YSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTV 380

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
             A+ AC  L  ++QG+ +H    +     D+ V + ++ MY KC  +  A  IF ++  
Sbjct: 381 MGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH 440

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              V+W  MI G   NG  + A+  + +M+L  + PD FT   ++ A + L+ L Q + I
Sbjct: 441 KTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWI 500

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +I+     + FV  +LVDMYAKCG +  A  LF  MD R+   WNAM+ G   HG G
Sbjct: 501 HGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLG 560

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           +  L+LFE MK   ++P+ VTF+ VLSACS++GLV E ++ F  M++ YG+EP ++HY  
Sbjct: 561 KAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGA 620

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD LGRA R  EA + I  MP E + S+  A+LGACR+  + E G+  A ++  L+P D
Sbjct: 621 MVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDD 680

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------A 832
              +VLL+NI+A A+ WD V   R  M++K ++K P                       A
Sbjct: 681 GGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQA 740

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
             I+A +E L  RIK  GY+PDT+ V  DVE+  KE+ L  HSEKLA A+ L++T P + 
Sbjct: 741 KKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTT 799

Query: 893 I---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           I                     ++ +E +  +  RFHH +DG C C D
Sbjct: 800 IHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGD 847



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 282/646 (43%), Gaps = 94/646 (14%)

Query: 163 APLLKLCLSSGYVWASETVHGYA---LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           A LL+LC S       + +H +    +K GL  +      LV+++ KFG + EA  +F  
Sbjct: 81  AILLELCTSM------KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQP 134

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI---SDLGKR 276
           ++++   L+  ML+ YA N   ++    F  +   G+ P   +   +L V    +DL K 
Sbjct: 135 IEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKG 194

Query: 277 HEEQVQAY--------------------------AIKLLLYNNNSNVVLWNKKLSGYLQV 310
            E   Q                            A K+       ++V WN  +SGY Q 
Sbjct: 195 KEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQN 254

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G    A+E  + M     + DS+T +  L AVA   +L +G+ IHG ++++GF S V V 
Sbjct: 255 GFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVS 314

Query: 371 NSLINMYSKMGCVCGLRT--DQFTLASVLRASS--------------------------- 401
            +L++MYSK G V   R   D+ T  +V+  +S                           
Sbjct: 315 TALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVE 374

Query: 402 ----SLPEGLHLSKQI-------HVHAIKN--DTVADSFVSTALIDVYCRNGSMAEAEYL 448
               ++   LH    +        VH + +  +  +D  V  +LI +Y +   +  A  +
Sbjct: 375 MTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEI 434

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FEN     L +WNAMI GY  +   ++A++ F  M     + D  T+ + + A   L +L
Sbjct: 435 FENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVL 494

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            Q K +H   +++  + ++ V++ ++DMY KCGA+  A+ +F+ +       W  MI G 
Sbjct: 495 PQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGY 554

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCS 625
             +G    AL ++ +M+   + P+E TF  ++ A S    +E+G Q   ++ K   L+ +
Sbjct: 555 GTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPA 614

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGN---GEETLKL 681
            D +   ++VD+  +   + +A+   ++M +   + ++ AML     H N   GE+    
Sbjct: 615 MDHYG--AMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANR 672

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             D+     +PD   +  +L+    T  + +         EK GI+
Sbjct: 673 IFDL-----DPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQ 713



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 233/539 (43%), Gaps = 87/539 (16%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I+ +    +      L++++ + GSL  A R+F  + D+    ++++L  YA +      
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARN-----S 154

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           ++ +    F  +R             LLK+C  +  +   + +H   +  G   + F   
Sbjct: 155 SLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMT 214

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
            +VN+Y+K   + EA  +FD M ERD+V W  ++  YA+NGFG+    L + +   G  P
Sbjct: 215 GVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRP 274

Query: 259 DDESVQCVLGVISDLGK-RHEEQVQAYAIKL--------------------------LLY 291
           D  ++  +L  ++D+G  R    +  Y+++                           L++
Sbjct: 275 DSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIF 334

Query: 292 N--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           +      VV WN  + GY+Q GD   A+E F  M+   V+  +VT + AL A A   ++ 
Sbjct: 335 DRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVE 394

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------- 383
            G+ +H    +    S V V NSLI+MYSK   V                          
Sbjct: 395 QGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYA 454

Query: 384 ------------C-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                       C      ++ D FT+ SV+ A + L   L  +K IH   I+     + 
Sbjct: 455 QNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAEL-SVLPQAKWIHGLVIRTCLDKNV 513

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           FV+TAL+D+Y + G++  A  LF+  D   + TWNAMI GY        ALELF  M   
Sbjct: 514 FVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKE 573

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
             + +E+T    + AC    ++++G Q    +MK  + L+       +D Y   GAMVD
Sbjct: 574 VIKPNEVTFLCVLSACSHSGLVEEGFQYFG-SMKKDYGLEPA-----MDHY---GAMVD 623



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 196/393 (49%), Gaps = 5/393 (1%)

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFGYILSNNSHKA 476
           IKN   ++    T L+ ++C+ GS+ EA  +F+  +D  D   ++ M+ GY  +++   A
Sbjct: 101 IKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKID-ELYHTMLKGYARNSSLDDA 159

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           +  F  M   G R         +K CG    L++GK++H   + +GF  ++   +G+++M
Sbjct: 160 VSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNM 219

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y KC  + +A  +F+ +P  D V W T+ISG   NG    AL +  +M+  G  PD  T 
Sbjct: 220 YAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITI 279

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             ++ A + + +L  GR IH   ++    S   V  +LVDMY+KCG++  A ++F +M  
Sbjct: 280 VSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTG 339

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           +  V WN+M+ G  Q+G+    +++F+ M    VE  +VT +G L AC+  G V +    
Sbjct: 340 KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG-RF 398

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            H + ++  +  +V   + L+    +  R   A E+  ++  +   S +  +LG  +   
Sbjct: 399 VHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGR 458

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
             E   +  +  M L+     ++ ++S I A A
Sbjct: 459 INEAIDYFCK--MQLQNIKPDSFTMVSVIPALA 489



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 192/442 (43%), Gaps = 67/442 (15%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +DL  GK  H +++ +    + F    ++ MY++C  +  A ++FD+MP+RDL+ WN+I+
Sbjct: 189 ADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTII 248

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           + YA +G G          L   ++E       +T+  +L      G +    ++HGY++
Sbjct: 249 SGYAQNGFGKT-----ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSM 303

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + G      VS ALV++YSK G +  A+ +FD M  + VV W  M+  Y +NG       
Sbjct: 304 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAME 363

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---------------------------E 279
           +F  +    +   + +V   L   +DLG   +                            
Sbjct: 364 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYS 423

Query: 280 QVQAYAIKLLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           + +   I   ++ N  +  +V WN  + GY Q G  + AI+ F  M   N++ DS T + 
Sbjct: 424 KCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVS 483

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
            + A+A    L   + IHG  +++     V V  +L++MY+K G V              
Sbjct: 484 VIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAV-------------- 529

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGF 455
                     H ++++       D + +  V+T  A+ID Y  +G    A  LFE K   
Sbjct: 530 ----------HTARKLF------DMMDERHVTTWNAMIDGYGTHGLGKAALELFE-KMKK 572

Query: 456 DLATWNAMIFGYILSNNSHKAL 477
           ++   N + F  +LS  SH  L
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGL 594



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 3/306 (0%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           +K+  Q     +K+G   +    + ++ ++ K G++ +A  +F  I    D  + TM+ G
Sbjct: 90  MKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKG 149

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              N   D A+S + +MR  GV P  + F  L+K       L +G++IH  LI    +S+
Sbjct: 150 YARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASN 209

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            F    +V+MYAKC  +E+AY +F +M  R+ V WN ++ G AQ+G G+  L+L   M+ 
Sbjct: 210 VFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQE 269

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G  PDS+T + +L A +  G +     + H    + G E  V   + LVD   + G   
Sbjct: 270 EGKRPDSITIVSILPAVADVGSLRIG-RSIHGYSMRAGFESFVNVSTALVDMYSKCGSVG 328

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
            A  +   M  +   S +  + G  +  GD      + +K+M  E  + +   ++  + A
Sbjct: 329 TARLIFDRMTGKTVVSWNSMIDGYVQ-NGDPGAAMEIFQKMMD-EQVEMTNVTVMGALHA 386

Query: 808 AANQWD 813
            A+  D
Sbjct: 387 CADLGD 392



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 34/332 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL        L +G+S H   + +       ++  L+ MYS+CGS+  AR +FD+M  +
Sbjct: 281 SILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK 340

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SWNS++  Y  +G+  A        +F+ + +     + +T+   L  C   G V  
Sbjct: 341 TVVSWNSMIDGYVQNGDPGA-----AMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQ 395

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VH    ++ L  D  V  +L+++YSK  ++  A  +F+ +Q + +V W  M+  YA+
Sbjct: 396 GRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQ 455

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ----------------- 280
           NG   E    F  +    + PD  ++  V+  +++L    + +                 
Sbjct: 456 NGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFV 515

Query: 281 ----VQAYAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               V  YA         KL    +  +V  WN  + GY   G    A+E F  M +  +
Sbjct: 516 ATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVI 575

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           + + VTFL  L+A + +  +  G Q  G+  K
Sbjct: 576 KPNEVTFLCVLSACSHSGLVEEGFQYFGSMKK 607



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 23/213 (10%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S L   K  H  ++ +    + F+   L+ MY++CG++  AR+LFD M +R + +WN+++
Sbjct: 492 SVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMI 551

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG--- 183
             Y   G G A        LF  +++ +   + +T   +L  C  SG V       G   
Sbjct: 552 DGYGTHGLGKA-----ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMK 606

Query: 184 --YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAE 237
             Y L+  +  D +  GA+V++  +  ++ EA      M  E  + ++  ML   R +  
Sbjct: 607 KDYGLEPAM--DHY--GAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKN 662

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
              GE+  +   DL      PDD     +L  I
Sbjct: 663 VELGEKAANRIFDLD-----PDDGGYHVLLANI 690


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/825 (31%), Positives = 383/825 (46%), Gaps = 146/825 (17%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + TVHG+ +  G      +   L++IY K      A+ LFD + + DV+    ++ AY+ 
Sbjct: 32  ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
            G  +    +F +       P D                                   + 
Sbjct: 92  LGNLKMAREIFNE------TPLDMR---------------------------------DT 112

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA--VAGTDNLNLGQQIH 355
           V +N  ++GY  + D H AIE F  M  +N Q D  TF   L+A  +   D    GQ +H
Sbjct: 113 VFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQ-MH 171

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
           GT +K G      V N+L+++Y K      L +    +AS  +    +P+          
Sbjct: 172 GTVVKFGIEIFPAVLNALLSVYVKCASSP-LVSSSSLMASARKLFDEMPK---------- 220

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                    + F+ T LI  Y RNG +  A  + +         WNAMI GY+       
Sbjct: 221 --------RNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFED 272

Query: 476 ALELFSHMHTSGERLDEITIATAVKAC--GCLLMLKQGKQMHAYAMKSGF--ELDLCVSS 531
           AL LF  M   G ++DE T  + + AC  G   +L  GKQ+HAY +K+    + D  +S 
Sbjct: 273 ALTLFRKMRLLGVQVDESTYTSVISACADGGFFLL--GKQVHAYILKNELNPDRDFLLSV 330

Query: 532 G---------------------------------ILDMYVKCGAMVDAQSIFNDIPAPDD 558
           G                                 +L  YV  G M +A+S F  +P  + 
Sbjct: 331 GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL 390

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           + WT MISG   NG  + AL +++QM+L G  P+++ FA  + A S L ALE GRQ+HA 
Sbjct: 391 LTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQ 450

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++ L   S   VG +++ MYA+CG +E A  +F  M   + V WN+M+  L QHG+G + 
Sbjct: 451 IVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKA 510

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           ++L+E M   G+ PD  TF+ VLSACS+ GLV E    F+ M E YGI P  +HY+ ++D
Sbjct: 511 IELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMID 570

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
              RAG+  +A  +I SMPFEA A +  ALL  CR  G+ + G   AEKL  L P     
Sbjct: 571 LFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGT 630

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------DLIFAKV--- 839
           YVLLSN++A+  +W+DV   R  M+ + VKK+PA                D +  +V   
Sbjct: 631 YVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSI 690

Query: 840 ----EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-- 893
               E L   +K+ GY+PDT +VL D+E E KE AL  HSEKLA A+GL+  P  + +  
Sbjct: 691 YNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRV 750

Query: 894 -------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                              +  +E +     RFHH ++G C C +
Sbjct: 751 FKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRN 795



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 174/689 (25%), Positives = 292/689 (42%), Gaps = 121/689 (17%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSGEGNAENVTEG 143
           PD      L+T YS  G+L  AR +F++ P   RD + +N+++  Y+H  +G++      
Sbjct: 77  PDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHS-----A 131

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE----TVHGYALKIGLVWDEFVSGA 199
             LFR++R +       T A +L    +S  ++  E     +HG  +K G+     V  A
Sbjct: 132 IELFRAMRWANFQPDDFTFASVLS---ASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNA 188

Query: 200 LVNIYSKFG---------KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           L+++Y K            +  A+ LFD M +R+  +W  ++  Y  NG           
Sbjct: 189 LLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNG----------- 237

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
                   D    + +L  +++                         + WN  +SGYL  
Sbjct: 238 --------DLTGAREILDTMTE----------------------QPGIAWNAMISGYLHH 267

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS----A 366
           G    A+  F  M    VQ D  T+   ++A A      LG+Q+H   LK+         
Sbjct: 268 GLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFL 327

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
           + VGN+LI +Y K G V G R   + +                             V D 
Sbjct: 328 LSVGNTLITLYWKYGKVDGARKIFYEMP----------------------------VKDI 359

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
                L+  Y   G M EA+  F      +L TW  MI G   +    +AL+LF+ M   
Sbjct: 360 ITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLD 419

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G   ++   A A+ AC  L  L+ G+Q+HA  +  G +  L V + ++ MY +CG +  A
Sbjct: 420 GYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAA 479

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           +++F  +P  D V+W +MI+    +G    A+ +Y QM   G++PD  TF  ++ A S  
Sbjct: 480 RTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHA 539

Query: 607 TALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLW 662
             +E+G +   ++++   +    D +    ++D++ + G   DA  +   M       +W
Sbjct: 540 GLVEEGNRYFNSMLENYGIAPGEDHYA--RMIDLFCRAGKFSDAKNVIDSMPFEARAPIW 597

Query: 663 NAMLVGLAQHGNG----EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            A+L G   HGN     E   KLF+ +  H       T++ + +  +  G  ++      
Sbjct: 598 EALLAGCRTHGNMDLGIEAAEKLFKLIPQH-----DGTYVLLSNMYASLGRWNDVARTRK 652

Query: 719 LMREKYGI--EP-----EVEH--YSFLVD 738
           LMR++ G+  EP     EVE+  + FLVD
Sbjct: 653 LMRDR-GVKKEPACSWTEVENKVHVFLVD 680



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 204/489 (41%), Gaps = 109/489 (22%)

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
           +L + +HG  + SGF     + N LI++Y K        +  F  A  L      P    
Sbjct: 30  SLARTVHGHVIASGFKLRGHIVNRLIDIYWK--------SSDFVYARKLFDEIPQP---- 77

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK--DGFDLATWNAMIFG 466
                           D    T LI  Y   G++  A  +F     D  D   +NAMI G
Sbjct: 78  ----------------DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITG 121

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM-LKQGKQMHAYAMKSGFEL 525
           Y   N+ H A+ELF  M  +  + D+ T A+ + A   +    +Q  QMH   +K G E+
Sbjct: 122 YSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEI 181

Query: 526 DLCVSSGILDMYVKCG---------AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE--- 573
              V + +L +YVKC           M  A+ +F+++P  ++  WTT+I+G V NG+   
Sbjct: 182 FPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTG 241

Query: 574 -----------------------------EDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                                        ED AL+++ +MRL GV  DE T+  ++ A +
Sbjct: 242 AREILDTMTEQPGIAWNAMISGYLHHGLFED-ALTLFRKMRLLGVQVDESTYTSVISACA 300

Query: 605 CLTALEQGRQIHANLIKLDCSSDP----FVGISLVDMYAK-------------------- 640
                  G+Q+HA ++K + + D      VG +L+ +Y K                    
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDII 360

Query: 641 -----------CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
                       G +E+A   F QM  +N + W  M+ GLAQ+G GE+ LKLF  MK  G
Sbjct: 361 TWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDG 420

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            EP+   F G ++ACS  G + E     H      G +  +   + ++    R G  + A
Sbjct: 421 YEPNDYAFAGAITACSVLGAL-ENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAA 479

Query: 750 GELILSMPF 758
             + L+MPF
Sbjct: 480 RTMFLTMPF 488



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 174/426 (40%), Gaps = 82/426 (19%)

Query: 84  QIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P R  F+   L+T Y R G L  AR + D M ++  I+WN++++ Y H G        
Sbjct: 217 EMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL-----FE 271

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE----FVS 197
           +   LFR +R         T   ++  C   G+    + VH Y LK  L  D      V 
Sbjct: 272 DALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVG 331

Query: 198 GALVNIYSKFGKI-------------------------------REAKFLFDGMQERDVV 226
             L+ +Y K+GK+                                EAK  F  M E++++
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLL 391

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYA 285
            W VM+   A+NGFGE+   LF  +   G  P+D +    +   S LG   +  Q+ A  
Sbjct: 392 TWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQI 451

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
           + L    ++S + + N  ++ Y + G    A   F+ M       D V++   +AA    
Sbjct: 452 VHL---GHDSTLSVGNAMITMYARCGIVEAARTMFLTM----PFVDPVSWNSMIAA---- 500

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS--- 402
               LGQ  HG                 I +Y +M    G+  D+ T  +VL A S    
Sbjct: 501 ----LGQHGHGV--------------KAIELYEQM-LKEGILPDRRTFLTVLSACSHAGL 541

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTA-LIDVYCRNGSMAEAEYLFENKDGFDLA-TW 460
           + EG      +    ++N  +A      A +ID++CR G  ++A+ + ++      A  W
Sbjct: 542 VEEGNRYFNSM----LENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIW 597

Query: 461 NAMIFG 466
            A++ G
Sbjct: 598 EALLAG 603



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 30/271 (11%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR-FLT- 91
           F  +L  F +          S + S++         LLGK  HA IL +   PDR FL  
Sbjct: 270 FEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLS 329

Query: 92  --NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE--------------- 134
             N L+T+Y + G +  AR++F +MP +D+I+WN++L+ Y ++G                
Sbjct: 330 VGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKN 389

Query: 135 ---------GNAEN--VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
                    G A+N    +  +LF  ++      +    A  +  C   G +     +H 
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHA 449

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             + +G      V  A++ +Y++ G +  A+ +F  M   D V W  M+ A  ++G G +
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK 509

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
              L+  + + G+ PD  +   VL   S  G
Sbjct: 510 AIELYEQMLKEGILPDRRTFLTVLSACSHAG 540



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 7/170 (4%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA+I++        + N ++TMY+RCG +  AR +F  MP  D +SWNS++AA   
Sbjct: 444 GRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQ 503

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-IGL 190
            G G      +   L+  + +      R T   +L  C  +G V          L+  G+
Sbjct: 504 HGHG-----VKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGI 558

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
              E     +++++ + GK  +AK + D M  E    +W+ +L     +G
Sbjct: 559 APGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHG 608


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/764 (30%), Positives = 383/764 (50%), Gaps = 81/764 (10%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +++ YS  G +  A+ LF     R+   W +M+RA+A  G   +   LF  +   G+ PD
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
             +V  VL    +L       +  +AIK  L   +++V + N  L  Y + G    A   
Sbjct: 140 RVTVTTVL----NLPGCTVPSLHPFAIKFGL---DTHVFVCNTLLDAYCKHGLLAAARRV 192

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F+ M       D+VT+   +   +                K G ++  +       +++ 
Sbjct: 193 FLEM----HDKDAVTYNAMMMGCS----------------KEGLHTQAL------QLFAA 226

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           M    G+    FT +S+L  ++ +   L L  Q+H   +++ +V + FV+ +L+D Y + 
Sbjct: 227 MR-RAGIPATHFTFSSILTVAAGMAH-LLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
             + +   LF+     D  ++N +I  Y  +  +   L LF  M   G     +  AT +
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
              G L  +  GKQ+HA  +  G   +  + + ++DMY KCG +  A+S F++      +
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT +I+G V NG+ + AL ++  MR +G+ PD  TF+ ++KASS L  +  GRQ+H+ L
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+    S  F G  LVDMYAKCG +++A   F +M  RN++ WNA++   A +G  +  +
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 524

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           K+FE M   G  PDSVTF+ VL+ACS+ GL  E  + FHLM+ +Y I P  EHY+ ++D 
Sbjct: 525 KMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGR G   +  ++++ MPF+A   +  ++L +CR+ G+ E  +  A+KL  +EP D++ Y
Sbjct: 585 LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPY 644

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           V+LSNI+A A QW+D    +  M+ + V+K+                         D I 
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIK 704

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--- 893
            +++ L K + + GY PD    L  V+ E K  +L YHSE+LA A+ L++TP  + I   
Sbjct: 705 DELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIM 764

Query: 894 ------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                             + N++ +   + RFHH +DG+C C D
Sbjct: 765 KNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGD 808



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 250/578 (43%), Gaps = 103/578 (17%)

Query: 84  QIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P +  F  N +++ YS  G L  A+ LF   P R+  +W  ++ A+A +G       +
Sbjct: 68  QMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGR-----TS 122

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           +   LFR++        R+T+  +L L    G    S  +H +A+K GL    FV   L+
Sbjct: 123 DALSLFRAMLGEGVIPDRVTVTTVLNL---PGCTVPS--LHPFAIKFGLDTHVFVCNTLL 177

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           + Y K G +  A+ +F  M ++D V +  M+   ++ G   +   LF  + R+G+     
Sbjct: 178 DAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHF 237

Query: 262 SVQCVLGVISDLGKRH---EEQVQAYAIK----LLLYNNNSNVVLWNK--------KLSG 306
           +   +L V +  G  H     QV A  ++    L ++ NNS +  ++K        +L  
Sbjct: 238 TFSSILTVAA--GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD 295

Query: 307 YLQVGDN---------HGAIECFVNMIRSNVQYDSVTF------LVALAAVAGT-DNLNL 350
            +   DN         +   +C   ++R   +   + F         + +VAG+  ++++
Sbjct: 296 EMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+QIH   +  G  S  ++GN+LI+MYSK G +                           
Sbjct: 356 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 415

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            GLR D+ T +S+++ASSSL   + L +Q+H + I++   +  F
Sbjct: 416 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM-IGLGRQLHSYLIRSGYKSSVF 474

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
             + L+D+Y + G + EA   F+     +  +WNA+I  Y     +  A+++F  M   G
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 534

Query: 488 ERLDEITIATAVKACG-------CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
              D +T  + + AC        C+      K  H Y++    E   CV    +D   + 
Sbjct: 535 FNPDSVTFLSVLAACSHNGLADECMKYFHLMK--HQYSISPWKEHYACV----IDTLGRV 588

Query: 541 GAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           G     Q +  ++P   D + WT+++  C  +G ++LA
Sbjct: 589 GCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 155/331 (46%), Gaps = 41/331 (12%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           +  +HF+ SS       IL  A   + LLLG   HA +L S+ + + F+ N+L+  YS+C
Sbjct: 232 IPATHFTFSS-------ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
             L   RRLFD+MP+RD +S+N I+AAYA +     +      RLFR +++       L 
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWN-----QCAATVLRLFREMQKLGFDRQVLP 339

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A +L +  S   V   + +H   + +GL  ++ +  AL+++YSK G +  AK  F    
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQ 280
           E+  + W  ++  Y +NG  EE   LF D+ R+GL PD  +   ++   S L       Q
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459

Query: 281 VQAYAIK--------------------------LLLYNN--NSNVVLWNKKLSGYLQVGD 312
           + +Y I+                          L  ++     N + WN  +S Y   G+
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
              AI+ F  M+      DSVTFL  LAA +
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 291/983 (29%), Positives = 461/983 (46%), Gaps = 151/983 (15%)

Query: 76   HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
            H  ++      D FL N+L+  Y++   L  A ++FD+MP+R+ +SW  +++ Y   G  
Sbjct: 84   HVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIA 143

Query: 136  NAENVTEGFRLFRSLRESITFTSR---LTLAPLLKLCLSSG--YVWASETVHGYALKIGL 190
                  E FR+FR++   +    R    T   LL+ C   G   +  +  VHG   K   
Sbjct: 144  E-----EAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEY 198

Query: 191  VWDEFVSGALVNIYSK--FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
              +  V  AL+++Y     G    A+ +FDG   RD++ W  ++  YA+ G     F LF
Sbjct: 199  ASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLF 258

Query: 249  VDLHRSG----LCPDDESVQCVL-----------------------GVISDLG------- 274
             D+ R      L P + +   ++                       G  SDL        
Sbjct: 259  KDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVS 318

Query: 275  --KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
               RH    +A  I L L     N V  N  + G ++   +  A++ FV   R+ V  ++
Sbjct: 319  AFARHGLTDEAKDIFLSL--KQKNAVTLNGLIVGLVRQDFSEEAVKIFVG-TRNTVDVNA 375

Query: 333  VTFLVALAAVA----GTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSKMGCVCGLR 387
             T++V L+A+A      + L +G+ +HG  L++G     + V N L+NMY+K G +    
Sbjct: 376  DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435

Query: 388  --------TDQFTLASVLRA-------------------------------SSSLPEGLH 408
                    TD+ +  +++ A                               S S   GL 
Sbjct: 436  KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLK 495

Query: 409  L---SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L    +Q+H  A+K     D+ VS  L+ +Y   G+M++   +F +    D  +WN M+ 
Sbjct: 496  LLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM- 554

Query: 466  GYILSNNS--HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
            G + S+ +   + +++F++M   G   +++T    + A   L +L+ GKQ+HA  MK G 
Sbjct: 555  GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGV 614

Query: 524  ELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYH 582
              D  V + ++  Y K G M   + +F ++    D ++W +MISG + NG    A+    
Sbjct: 615  MEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVW 674

Query: 583  QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
             M  SG + D  TF+I++ A + + ALE+G ++HA  I+    SD  V  +LVDMY+KCG
Sbjct: 675  LMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCG 734

Query: 643  NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
             ++ A  LF  M  RN   WN+M+ G A+HG G + +++FE+M      PD VTF+ VLS
Sbjct: 735  RVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLS 794

Query: 703  ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
            ACS+ GLV    E F +M + +GI P++EHYS ++D LGRAG+  +  E I  MP E +A
Sbjct: 795  ACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNA 853

Query: 763  SMHRALLGACRVQGD---TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
             + R +L ACR   D    + G+  +  L+ +EP +   YVL SN  AA   W+D   AR
Sbjct: 854  LIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKAR 913

Query: 820  GEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTD 856
              M++   KK+                           I+ K+  LI+ I+  GYVP T+
Sbjct: 914  TAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTE 973

Query: 857  FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV-ILSN------------------- 896
            + L D+EEE KE  L YHSEKLA A+ L  +    + I+ N                   
Sbjct: 974  YALYDLEEENKEELLSYHSEKLAIAFVLTRSSSGPIRIMKNLRVCGDCHIAFRYISQMIS 1033

Query: 897  KEPLYAN--RFHHLRDGMCPCAD 917
            ++ +  +  RFHH +DG C C D
Sbjct: 1034 RQIILRDSIRFHHFKDGKCSCGD 1056



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 183/685 (26%), Positives = 303/685 (44%), Gaps = 94/685 (13%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A LL L    G   + E +H   +K GL  D F+   LVN Y+K  ++  A  +FD M E
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHR---SGLCPDDESVQCVLGVISDLGK-RHE 278
           R+ V W  ++  Y  +G  EE F +F  + R   +G  P   +   +L    D G  R  
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG 184

Query: 279 EQVQAYA-IKLLLYNNNSNV-------------------------------VLWNKKLSG 306
             VQ +  +    Y +N+ V                               + WN  +S 
Sbjct: 185 FAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSV 244

Query: 307 YLQVGDNHGAIECFVNMIR--SNVQYDSV--TF--LVALAAVAGTDNLNLGQQIHGTTLK 360
           Y + GD       F +M R  S +Q      TF  L+  A+++   +  L  Q+    LK
Sbjct: 245 YAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVL-DQVLVWVLK 303

Query: 361 SGFYSAVIVGNSLINMYSKM----------------------GCVCGLRTDQFT------ 392
           SG  S + VG++L++ +++                       G + GL    F+      
Sbjct: 304 SGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKI 363

Query: 393 -----------------LASVLRASSSLPEGLHLSKQIHVHAIKND-TVADSFVSTALID 434
                            L S L   S   EGL + + +H H ++   T     VS  L++
Sbjct: 364 FVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVN 423

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G++  A  +F+  +  D  +WN +I     + N  +A+  +S M  S        
Sbjct: 424 MYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFA 483

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           + +++ +C  L +L  G+Q+H  A+K G +LD  VS+ ++ MY +CGAM D   +FN + 
Sbjct: 484 LISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA 543

Query: 555 APDDVAWTTMISGCVDNGEEDLA--LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
             D+V+W TM+ G + + +  ++  + +++ M   G++P++ TF  L+ A S L+ LE G
Sbjct: 544 EHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELG 602

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQ 671
           +Q+HA ++K     D  V  +L+  YAK G++     LF  M D R+ + WN+M+ G   
Sbjct: 603 KQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIY 662

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +GN +E +     M   G   D  TF  +L+AC+    +    E  H    +  +E +V 
Sbjct: 663 NGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGME-LHAFGIRSHLESDVV 721

Query: 732 HYSFLVDALGRAGRTKEAGELILSM 756
             S LVD   + GR   A +L  SM
Sbjct: 722 VESALVDMYSKCGRVDYASKLFNSM 746



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 226/544 (41%), Gaps = 97/544 (17%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPD 116
           ++  ++IS   L +G+  H  +L +     +  ++N L+ MY++CG++  A ++F  M  
Sbjct: 384 ALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEA 443

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            D ISWN+I++A   +G     N  E    +  +R+S    S   L   L  C     + 
Sbjct: 444 TDRISWNTIISALDQNG-----NCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLT 498

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           A + VH  A+K GL  D  VS  LV +Y + G + +   +F+ M E D V W  M+   A
Sbjct: 499 AGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMA 558

Query: 237 ENGFG-EEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI---- 286
            +     E+  +F ++ R GL P+  +   +L  +S     +LGK+    V  + +    
Sbjct: 559 SSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDN 618

Query: 287 ----KLL--------------LYNNNS---NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                L+              L+ N S   + + WN  +SGY+  G+   A++C   MI 
Sbjct: 619 VVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIH 678

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S    D  TF + L A A    L  G ++H   ++S   S V+V ++L++MYSK G    
Sbjct: 679 SGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCG---- 734

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R D                  + SK  +    +N+     F   ++I  Y R+G     
Sbjct: 735 -RVD------------------YASKLFNSMTQRNE-----FSWNSMISGYARHGL---- 766

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
                                        KA+E+F  M  S E  D +T  + + AC   
Sbjct: 767 ---------------------------GRKAIEIFEEMLRSRESPDHVTFVSVLSACSHA 799

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTM 564
            ++++G +        G    +   S ++D+  + G +   +     +P  P+ + W T+
Sbjct: 800 GLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTV 859

Query: 565 ISGC 568
           +  C
Sbjct: 860 LVAC 863



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 17/286 (5%)

Query: 505 LLMLKQG------KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           L +L++G      + +H   +K G   DL + + +++ Y K   +  A  +F+++P  + 
Sbjct: 68  LPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNA 127

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRL---SGVVPDEFTFAILVKA--SSCLTALEQGR 613
           V+WT ++SG V +G  + A  ++  M     +G  P  FTF  L++A        L    
Sbjct: 128 VSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAV 187

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKC--GNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           Q+H  + K + +S+  V  +L+ MY  C  G    A  +F    +R+ + WNA++   A+
Sbjct: 188 QVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAK 247

Query: 672 HGNGEETLKLFEDMKAHG----VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
            G+   T  LF+DM+       + P   TF  +++A S +   S   +   +   K G  
Sbjct: 248 KGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCS 307

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            ++   S LV A  R G T EA ++ LS+  + + +++  ++G  R
Sbjct: 308 SDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVR 353



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 7/190 (3%)

Query: 57  FSILRHAI-STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FSI+ +A  S + L  G   HA  + S    D  + + L+ MYS+CG + YA +LF+ M 
Sbjct: 688 FSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT 747

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R+  SWNS+++ YA  G G      +   +F  +  S      +T   +L  C  +G V
Sbjct: 748 QRNEFSWNSMISGYARHGLGR-----KAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLV 802

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
                        G++        ++++  + GKI + K     M  E + ++W+ +L A
Sbjct: 803 ERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVA 862

Query: 235 YAENGFGEEV 244
             ++  G  +
Sbjct: 863 CRQSKDGSNI 872


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 257/844 (30%), Positives = 398/844 (47%), Gaps = 154/844 (18%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           TS    A +L+  +     +A  +VH   +K GL    ++   L+  Y+K G +R A  +
Sbjct: 8   TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD M  +    W  ++  YA+ G  E    L  ++      PD + V             
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEM------PDCDPVS------------ 109

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                  W   + GY Q G    AI  F  MI   V     T  
Sbjct: 110 -----------------------WTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVS 146

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--CVCGLRTDQFTLA 394
             L++ A    L++G++IH   +K G  S V V  SL+NMY+K G   +  +  D+ T  
Sbjct: 147 NVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT-- 204

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
                                  +KN +  +     ALI +Y ++G    A   FE    
Sbjct: 205 -----------------------VKNISTWN-----ALISLYMQSGQFELAASQFEKMPD 236

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQ 513
            D+ +WN+MI GY     + +AL +FS M +    + D  T+A+ + AC  L  L  GKQ
Sbjct: 237 RDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296

Query: 514 MHAYAMKSGFE---------------------------------LDLCVSSGILDMYVKC 540
           +HAY +++  E                                 L++   + +LD Y K 
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G +  A+ IFN +   D VAWT MI G V NG  + AL ++  M   G  P+ +T A ++
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
             SS LT LE G+QIHA+ IK   SS P V  +L+ MYAK GNI  A  +F   + +  +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476

Query: 661 L-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           + W +M++ LAQHG G+E + LFE M + G++PD +T++GVLSAC++ GLV +  + +++
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM 536

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M E + IEP + HY+ ++D  GRAG  +EA   I SMP E       +LL +C++  + +
Sbjct: 537 MTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD 596

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
             K  AE+L+ ++P +S AY+ L+N+++A  +W++    R  MK + V+K+         
Sbjct: 597 LAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIK 656

Query: 833 ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                           D I+  +  + + IK+ G++PDT+ VL D+EEE KE+ L YHSE
Sbjct: 657 NEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSE 716

Query: 877 KLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMC 913
           KLA A+GL++TP ++ +                     L  +E +   A RFHH +DG C
Sbjct: 717 KLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSC 776

Query: 914 PCAD 917
            C D
Sbjct: 777 SCRD 780



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 141/653 (21%), Positives = 260/653 (39%), Gaps = 183/653 (28%)

Query: 49  SSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           +S +SS++F+ IL+ ++   D   G+S H +I+        +L NNLMT Y++ GSL +A
Sbjct: 5   NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFA 64

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEGNAEN----------------VTEGFRLFRSLR 151
             +FD+MP +   SWN++++ YA  G                      +  G+  F    
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124

Query: 152 ESITF----------TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
            +I             S+ T++ +L  C ++  +     +H + +K+GL     V+ +L+
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184

Query: 202 NIYSKFGKIREAKFLFD-------------------------------GMQERDVVLWKV 230
           N+Y+K G    AK +FD                                M +RD+V W  
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244

Query: 231 MLRAYAENGFGEEVFHLFVD-LHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAI-- 286
           M+  Y++ G+  E   +F   L+   L PD+ ++  +L   ++L K +  +Q+ AY +  
Sbjct: 245 MISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304

Query: 287 -------------------------KLLLYNN---NSNVVLWNKKLSGYLQVGDN----- 313
                                    +L++ +N   N N++ +   L GY ++G+      
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364

Query: 314 --------------------------HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                                     + A+E F  M+    + +S T    L+  +    
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           L  G+QIH + +K+G  S   V N+LI MY+K G +           +V +    LP G 
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNI-----------NVAKRVFDLPNG- 472

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
              K+I                                             +W +MI   
Sbjct: 473 --KKEI--------------------------------------------VSWTSMIMAL 486

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
                  +A+ LF  M + G + D IT    + AC  + +++QG++ +   M    E++ 
Sbjct: 487 AQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM-MTEVHEIEP 545

Query: 528 CVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            +S  + ++D+Y + G + +A      +P  PD++AW ++++ C  +   DLA
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 255/804 (31%), Positives = 405/804 (50%), Gaps = 80/804 (9%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           A LL+ C++ G   A   VH   ++ G V   D F +  L+N+Y+K G +  A+ LFDGM
Sbjct: 51  ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGM 110

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEE 279
            ER++V +  +++ YA  G  EE   LF  L R G   +   +  +L V+  +       
Sbjct: 111 PERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC 170

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
            + A A KL    ++ N  + +  +  Y   G    A  C  + I   +  D+VT+   +
Sbjct: 171 CIHACACKL---GHDRNAFVGSSLIDAYSLCGAVSHA-RCVFDGI---IWKDAVTWTAMV 223

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
           +  +  D                      +    +N +SKM  + G + + F L SVL+A
Sbjct: 224 SCYSEND----------------------IPEDALNTFSKMR-MAGAKPNPFVLTSVLKA 260

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           +  L   + L K IH  A+K     +  V  AL+D+Y + G + +A  +FE     D+  
Sbjct: 261 AVCLSSAV-LGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVIL 319

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+ +I  Y  S  + +A E+F  M  S    +E +++  ++AC  +  L  G+Q+H   +
Sbjct: 320 WSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVI 379

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           K G+E +L V + ++D+Y KC  M ++  IF  +   ++V+W T+I G   +G  + ALS
Sbjct: 380 KLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALS 439

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           ++ +MR + V+  + TF+ +++A +   +++   QIH+ + K   ++D  V  SL+D YA
Sbjct: 440 VFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYA 499

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCG I DA  +F+ +   + V WNA++ G A HG   + L+LF  M     +P+ VTF+ 
Sbjct: 500 KCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVA 559

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           +LS C  TGLV++    F+ M   + I+P ++HY+ +V  LGRAGR  +A + I  +P  
Sbjct: 560 LLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPST 619

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
            S  + RALL +C V  +   GK+ AEK++ +EP D + YVLLSN++AAA   D V   R
Sbjct: 620 PSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLR 679

Query: 820 GEMKRKNVKKD------------------PAD-----LIFAKVEGLIKRIKEGGYVPDTD 856
             M+   VKK+                   AD     +I A +E L  +    GYVPD +
Sbjct: 680 KSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDIN 739

Query: 857 FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LS 895
            VL DV+EEEK R L+ HSE+LA AYGL  TPP   I                     + 
Sbjct: 740 VVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIV 799

Query: 896 NKEPLY--ANRFHHLRDGMCPCAD 917
            +E +    NRFHH  +G+C C D
Sbjct: 800 QREIVVRDINRFHHFDEGICSCGD 823



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 181/708 (25%), Positives = 317/708 (44%), Gaps = 116/708 (16%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFS------------------ILRHAISTSDLL 70
           R LP+FS   +P  +     +++++ QW                    +L+  I+  D  
Sbjct: 8   RLLPTFSQPNVPLRRNL---AANAALQWLDDELASLALPKLDSYACARLLQRCIARGDAR 64

Query: 71  LGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
            G++ HAR++    +   D F  N L+ +Y++ G L  ARRLFD MP+R+++S+ +++  
Sbjct: 65  AGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQG 124

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YA  G        E   LFR L+      +   L  +LK+ ++      +  +H  A K+
Sbjct: 125 YALRG-----GFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKL 179

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   + FV  +L++ YS  G +  A+ +FDG+  +D V W  M+  Y+EN   E+  + F
Sbjct: 180 GHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTF 239

Query: 249 VDLHRSGLCPDDESVQCVLGVI-----SDLGKRHEEQVQAYAIKLL-------------L 290
             +  +G  P+   +  VL        + LGK     +   A+K L             +
Sbjct: 240 SKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGK----GIHGCAVKTLCDTEPHVGGALLDM 295

Query: 291 YNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           Y                 + +V+LW+  +S Y Q   N  A E F+ M+RS+V  +  + 
Sbjct: 296 YAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSL 355

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------------- 381
              L A A    L+LGQQIH   +K G+ S + VGN+L+++Y+K                
Sbjct: 356 SGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRD 415

Query: 382 -------------CVCGLRTD----------------QFTLASVLRASSSLPEGLHLSKQ 412
                        C  G   D                Q T +SVLRA ++     H + Q
Sbjct: 416 ANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKH-TVQ 474

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH    K+    D+ V  +LID Y + G + +A  +FE+    D+ +WNA+I GY L   
Sbjct: 475 IHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGR 534

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSS 531
           +  ALELF+ M+ S  + +++T    +  CG   ++ QG  + ++  M    +  +   +
Sbjct: 535 ATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYT 594

Query: 532 GILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            I+ +  + G + DA     DIP+ P  + W  ++S CV +  +++AL  +   ++  + 
Sbjct: 595 CIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVH--KNVALGKFSAEKVLEIE 652

Query: 591 P-DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           P DE T+ +L    +    L+Q   +  ++  +    +  VG+S V++
Sbjct: 653 PQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKE--VGLSWVEI 698



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 126/264 (47%), Gaps = 13/264 (4%)

Query: 15  HTYVIFSSFT----KDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL 70
           H  VI  SF       +Y+N  +F +    FL+    S   +      +L+   + + L 
Sbjct: 314 HDDVILWSFLISRYAQSYQNEQAFEM----FLRMMRSSVVPNEFSLSGVLQACANVAFLD 369

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H  ++      + F+ N LM +Y++C ++  +  +F  + D + +SWN+I+  Y 
Sbjct: 370 LGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYC 429

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            SG        +   +F+ +R +   ++++T + +L+ C ++  +  +  +H    K   
Sbjct: 430 QSGFAE-----DALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTF 484

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  V  +L++ Y+K G IR+A  +F+ + + DVV W  ++  YA +G   +   LF  
Sbjct: 485 NNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNR 544

Query: 251 LHRSGLCPDDESVQCVLGVISDLG 274
           +++S   P+D +   +L V    G
Sbjct: 545 MNKSDTKPNDVTFVALLSVCGSTG 568



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 2/217 (0%)

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG--FELDLCVSSGILDMYVKCGAMVDA 546
           +LD    A  ++ C      + G+ +HA  ++ G   +LD   ++ +L++Y K G +  A
Sbjct: 44  KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +F+ +P  + V++ T++ G    G  + A  ++ +++  G   + F    ++K    +
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A      IHA   KL    + FVG SL+D Y+ CG +  A  +F  +  ++ V W AM+
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
              +++   E+ L  F  M+  G +P+      VL A
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 216/586 (36%), Positives = 328/586 (55%), Gaps = 57/586 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  D  TL+SVL     L +   L+  +HV+A+K+    + FV  ALIDVY + G + E
Sbjct: 163 GVAGDAVTLSSVLPMCVVLGDRA-LALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTE 221

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG---ERLDEITIATAVKA 501
           A ++F      DL TWN++I           A+ELF  M  SG   + L  +++A+AV  
Sbjct: 222 AHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQ 281

Query: 502 CGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           CG  L     K +H Y  + G+++ D+   + ++DMY K   +  AQ +F+++P  D V+
Sbjct: 282 CGDEL---GAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVS 338

Query: 561 WTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           W T+I+G + NG  + A+ IY+ M    G+ P + TF  ++ A S L  L+QG ++HA  
Sbjct: 339 WNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALS 398

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           IK   + D +V   L+D+YAKCG + +A  LF+ M  R+T  WNA++ GL  HG+G + L
Sbjct: 399 IKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKAL 458

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF  M+   ++PD VTF+ +L+ACS+ GLV +    F LM+  YGI P  +HY+ +VD 
Sbjct: 459 SLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDM 518

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAG+  EA E I SMP +  +++  ALLGACR+ G+ E GK  ++ L  L+P +   Y
Sbjct: 519 LGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYY 578

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------------DL 834
           VL+SN++A   +WD V + R  ++R+N++K P                          + 
Sbjct: 579 VLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEE 638

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           I   +  L+ ++K  GYVPD  FVL DVEE+EKE+ L  HSE+LA A+G+I+TPP + + 
Sbjct: 639 IQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLH 698

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                               ++ +E +   ANRFHH +DG C C D
Sbjct: 699 IYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGD 744



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 156/627 (24%), Positives = 248/627 (39%), Gaps = 131/627 (20%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE-FVSGALVNIYSKFGKIREAKFLFD 218
            T  PL++         ++  +H  AL++GL+    F SG+LV+ Y +FG++ EA  +FD
Sbjct: 70  FTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFD 126

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            M ERDV  W  ML     N    +   L   +   G+  D  ++  VL +   LG R  
Sbjct: 127 EMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRAL 186

Query: 279 EQV-QAYAIK------LLLYNNNSNV----------------------VLWNKKLSGYLQ 309
             V   YA+K      L + N   +V                      V WN  +S   Q
Sbjct: 187 ALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQ 246

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVI 368
            G    A+E F  M+ S V  D +T +   +AVA   +    + +H    + G+    +I
Sbjct: 247 GGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDII 306

Query: 369 VGNSLINMYSKMGCVC-------------------------------------------- 384
            GN++++MY+KM  +                                             
Sbjct: 307 AGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHE 366

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL+  Q T  SVL A S L  GL    ++H  +IK     D +V+T LID+Y + G + E
Sbjct: 367 GLKPIQGTFVSVLPAYSYL-GGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVE 425

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A +LFE+        WNA+I G  +  +  KAL LFS M     + D +T  + + AC  
Sbjct: 426 AMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSH 485

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
             ++ QG        +S F+L                     Q+++  +P      +T M
Sbjct: 486 AGLVDQG--------RSFFDL--------------------MQTVYGIVPIAKH--YTCM 515

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +      G+ D A      M +    PD   +  L+ A      +E G+    NL +LD 
Sbjct: 516 VDMLGRAGQLDEAFEFIQSMPIK---PDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 572

Query: 625 SSDPFVGISLVDMYAKCG---NIEDAYILFKQMDMRNTVLWNAMLVG-----------LA 670
            +  +  + + +MYAK G    ++    L ++ +++ T  W++M V              
Sbjct: 573 ENVGYY-VLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTE 631

Query: 671 QHGNGEETLK----LFEDMKAHGVEPD 693
            H   EE  +    L   MK+ G  PD
Sbjct: 632 PHPQHEEIQRGLHDLLAKMKSAGYVPD 658



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 157/327 (48%), Gaps = 36/327 (11%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P+ F + +L+  Y R G +  A R+FD+MP+RD+ +WN++L+    +    A+ VT    
Sbjct: 100 PNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRA-ADAVT---L 155

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           L R + E +   + +TL+ +L +C+  G    +  +H YA+K GL  + FV  AL+++Y 
Sbjct: 156 LGRMVGEGVAGDA-VTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYG 214

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G + EA ++F GM  RD+V W  ++ A  + G       LF  +  SG+CPD  ++  
Sbjct: 215 KLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVS 274

Query: 266 VLGVISDLGKR-HEEQVQAY-----------------------------AIKLLLYNNNS 295
           +   ++  G     + V  Y                             A K+     + 
Sbjct: 275 LASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDR 334

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +VV WN  ++GY+Q G  + AI  + +M     ++    TF+  L A +    L  G ++
Sbjct: 335 DVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRM 394

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMG 381
           H  ++K+G    V V   LI++Y+K G
Sbjct: 395 HALSIKTGLNLDVYVTTCLIDLYAKCG 421



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 151/351 (43%), Gaps = 47/351 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   +   D  L    H   +      + F+ N L+ +Y + G L  A  +F  M  R
Sbjct: 173 SVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALR 232

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL++WNSI++A    G+     V     LF  + ES      LTL  L       G    
Sbjct: 233 DLVTWNSIISANEQGGK-----VAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELG 287

Query: 178 SETVHGYALKIGLVWD--EFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +++VH Y  + G  WD  + ++G A+V++Y+K  KI  A+ +FD + +RDVV W  ++  
Sbjct: 288 AKSVHCYVRRRG--WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITG 345

Query: 235 YAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIK----- 287
           Y +NG   E   ++ D+H   GL P   +   VL   S LG   +  ++ A +IK     
Sbjct: 346 YMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL 405

Query: 288 --------LLLYNNNSNVV---------------LWNKKLSGYLQVGDNHGAIECFVNMI 324
                   + LY     +V                WN  ++G    G    A+  F  M 
Sbjct: 406 DVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ 465

Query: 325 RSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           +  ++ D VTF+  LAA +       G    +L Q ++G    +  Y+ ++
Sbjct: 466 QEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMV 516



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 4/221 (1%)

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQ 547
           R D  T    V+A           Q+HA A++ G    ++  S  ++  Y++ G + +A 
Sbjct: 66  RPDSFTFPPLVRAAPGP---ASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAY 122

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+++P  D  AW  M+SG   N     A+++  +M   GV  D  T + ++     L 
Sbjct: 123 RVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLG 182

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
                  +H   +K   S + FV  +L+D+Y K G + +A+ +F  M +R+ V WN+++ 
Sbjct: 183 DRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIIS 242

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
              Q G     ++LF  M   GV PD +T + + SA +  G
Sbjct: 243 ANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG 283



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 5/160 (3%)

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYI 649
           PD FTF  LV+A+          Q+HA  ++L     + F   SLV  Y + G + +AY 
Sbjct: 67  PDSFTFPPLVRAAP---GPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F +M  R+   WNAML GL ++    + + L   M   GV  D+VT   VL  C   G 
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            + A    H+   K+G+  E+   + L+D  G+ G   EA
Sbjct: 184 RALALV-MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEA 222


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/764 (30%), Positives = 383/764 (50%), Gaps = 81/764 (10%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +++ YS  G +  A+ LF     R+   W +M+RA+A  G   +   LF  +   G+ PD
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
             +V  VL    +L       +  +AIK  L   +++V + N  L  Y + G    A   
Sbjct: 140 RVTVTTVL----NLPGCTVPSLHPFAIKFGL---DTHVFVCNTLLDAYCKHGLLAAARRV 192

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F+ M       D+VT+   +   +                K G ++  +       +++ 
Sbjct: 193 FLEM----HDKDAVTYNAMMMGCS----------------KEGLHTQAL------QLFAA 226

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           M    G+    FT +S+L  ++ +   L L  Q+H   +++ +V + FV+ +L+D Y + 
Sbjct: 227 MR-RAGIPATHFTFSSILTVAAGMAH-LLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
             + +   LF+     D  ++N +I  Y  +  +   L LF  M   G     +  AT +
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
              G L  +  GKQ+HA  +  G   +  + + ++DMY KCG +  A+S F++      +
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT +I+G V NG+ + AL ++  MR +G+ PD  TF+ ++KASS L  +  GRQ+H+ L
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+    S  F G  LVDMYAKCG +++A   F +M  RN++ WNA++   A +G  +  +
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 524

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           K+FE M   G  PDSVTF+ VL+ACS+ GL  E  + FHLM+ +Y I P  EHY+ ++D 
Sbjct: 525 KMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGR G   +  ++++ MPF+A   +  ++L +CR+ G+ E  +  A+KL  +EP D++ Y
Sbjct: 585 LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPY 644

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           V+LSNI+A A QW+D    +  M+ + V+K+                         D I 
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIK 704

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--- 893
            +++ L K + + GY PD    L  V+ E K  +L YHSE+LA A+ L++TP  + I   
Sbjct: 705 DELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIM 764

Query: 894 ------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                             + N++ +   + RFHH +DG+C C D
Sbjct: 765 KNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGD 808



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 136/578 (23%), Positives = 250/578 (43%), Gaps = 103/578 (17%)

Query: 84  QIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P +  F  N +++ YS  G L  A+ LF   P R+  +W  ++ A+A +G       +
Sbjct: 68  QMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGR-----TS 122

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           +   LFR++        R+T+  +L L   +       ++H +A+K GL    FV   L+
Sbjct: 123 DALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-----VPSLHPFAIKFGLDTHVFVCNTLL 177

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           + Y K G +  A+ +F  M ++D V +  M+   ++ G   +   LF  + R+G+     
Sbjct: 178 DAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHF 237

Query: 262 SVQCVLGVISDLGKRH---EEQVQAYAIK----LLLYNNNSNVVLWNK--------KLSG 306
           +   +L V +  G  H     QV A  ++    L ++ NNS +  ++K        +L  
Sbjct: 238 TFSSILTVAA--GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD 295

Query: 307 YLQVGDN---------HGAIECFVNMIRSNVQYDSVTF------LVALAAVAGT-DNLNL 350
            +   DN         +   +C   ++R   +   + F         + +VAG+  ++++
Sbjct: 296 EMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+QIH   +  G  S  ++GN+LI+MYSK G +                           
Sbjct: 356 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 415

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            GLR D+ T +S+++ASSSL   + L +Q+H + I++   +  F
Sbjct: 416 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM-IGLGRQLHSYLIRSGYKSSVF 474

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
             + L+D+Y + G + EA   F+     +  +WNA+I  Y     +  A+++F  M   G
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 534

Query: 488 ERLDEITIATAVKACG-------CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
              D +T  + + AC        C+      K  H Y++    E   CV    +D   + 
Sbjct: 535 FNPDSVTFLSVLAACSHNGLADECMKYFHLMK--HQYSISPWKEHYACV----IDTLGRV 588

Query: 541 GAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           G     Q +  ++P   D + WT+++  C  +G ++LA
Sbjct: 589 GCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 154/329 (46%), Gaps = 41/329 (12%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           +  +HF+ SS       IL  A   + LLLG   HA +L S+ + + F+ N+L+  YS+C
Sbjct: 232 IPATHFTFSS-------ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
             L   RRLFD+MP+RD +S+N I+AAYA +     +      RLFR +++       L 
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWN-----QCAATVLRLFREMQKLGFDRQVLP 339

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A +L +  S   V   + +H   + +GL  ++ +  AL+++YSK G +  AK  F    
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQ 280
           E+  + W  ++  Y +NG  EE   LF D+ R+GL PD  +   ++   S L       Q
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459

Query: 281 VQAYAIK--------------------------LLLYNN--NSNVVLWNKKLSGYLQVGD 312
           + +Y I+                          L  ++     N + WN  +S Y   G+
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAA 341
              AI+ F  M+      DSVTFL  LAA
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 255/834 (30%), Positives = 387/834 (46%), Gaps = 145/834 (17%)

Query: 169 CLSSGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           CL S   ++ +  VH + +  G      +   L++IYSK  K+  A++LFD + + D+V 
Sbjct: 22  CLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVA 81

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
              ++ AY+  G  +    +F D                    + LG R           
Sbjct: 82  RTTLIAAYSAAGDLKLSRKIFSD--------------------TPLGMR----------- 110

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-GTD 346
                   + V +N  ++ Y    D H AIE F +M R N + D+ TF   L A+A   +
Sbjct: 111 --------DSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAE 162

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL-ASVLRASSSLPE 405
                QQ+H   +KSG      V N+LI+ Y K  C         +L A   +    +P 
Sbjct: 163 KEKHCQQLHCAVVKSGTGFVTSVLNALISSYVK--CAASPSAQSSSLMAEARKLFDEMPN 220

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM-AEAEYLFENKDGFDLATWNAMI 464
                              D    T +I  Y +N  + A  E+L        +A WNAMI
Sbjct: 221 ------------------RDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVA-WNAMI 261

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--- 521
            GY       +A E+F  M  S  +LDE T  + +  C      + GK+MHAY +K+   
Sbjct: 262 SGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVAN 321

Query: 522 -GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG-----CVDN---- 571
              ++ + V++ ++  Y KCG +  AQ IFN +P  D V+W  ++SG     C+D     
Sbjct: 322 PAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSF 381

Query: 572 ----------------------GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
                                 G  + AL  +++M+L G  P ++ FA  + + S L +L
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSL 441

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           + GRQ+HA +++    S    G +L+ MYA+CG ++ A+ LF  M   + + WNAM+  L
Sbjct: 442 KHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAAL 501

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
            QHG G + ++LFE+M   G+ PD ++F+ V+SACS+ GLV E  + F  M   YG+ P+
Sbjct: 502 GQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPD 561

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            EHY+ ++D L RAG+  EA E++ SMPFE  A +  ALL  CR+ G+ + G   AE+L 
Sbjct: 562 EEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLF 621

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
            L+P     YVLLSN++A A QW+D+   R  M+ + VKK+P                  
Sbjct: 622 ELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGD 681

Query: 833 ------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I+  +E L+  +++ GYVPDT  VL DVE + KE  L  HSEKLA AYG + 
Sbjct: 682 ANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMK 741

Query: 887 TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            P  + +                     +  +E +     RFHH RDG C C D
Sbjct: 742 LPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGD 795



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 162/679 (23%), Positives = 280/679 (41%), Gaps = 143/679 (21%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS--------- 121
           L +  HA ++ S   P   + N L+ +YS+   L YAR LFD++P  D+++         
Sbjct: 31  LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90

Query: 122 ------------------------WNSILAAYAHSGEGNAENVTEGFRLFRSLR------ 151
                                   +N+++ AY+H+ +G+A        LF  ++      
Sbjct: 91  AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHA-----AIELFCDMQRDNFRP 145

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK-- 209
           ++ TFTS L       L L +      + +H   +K G  +   V  AL++ Y K     
Sbjct: 146 DNYTFTSVLG-----ALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASP 200

Query: 210 -------IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
                  + EA+ LFD M  RD + W  ++  Y +N           DL        D +
Sbjct: 201 SAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNN----------DL--------DAA 242

Query: 263 VQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            + + G    LG                       V WN  +SGY   G    A E F  
Sbjct: 243 KEFLNGTSKKLG-----------------------VAWNAMISGYAHRGLYLEAFEMFRK 279

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS----GFYSAVIVGNSLINMYS 378
           MI S +Q D  TF   ++  A      LG+++H   LK+        A+ V N+LI  Y 
Sbjct: 280 MIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           K G V                         ++++I     + D V+ + + +  ++V C 
Sbjct: 340 KCGKV------------------------DIAQEIFNKMPERDLVSWNIILSGYVNVRC- 374

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
              M EA+  F      ++ +W  MI G      + +AL+ F+ M   G    +   A A
Sbjct: 375 ---MDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + +C  L  LK G+Q+HA  ++ G+E  L   + ++ MY +CG +  A  +F ++P  D 
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDA 491

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ---- 614
           ++W  MI+    +G+   A+ ++ +M   G++PD  +F  ++ A S    +++GR+    
Sbjct: 492 ISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDS 551

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHG 673
           +H N+  ++   + +  I  +D+  + G   +A  + + M       +W A+L G   HG
Sbjct: 552 MH-NVYGVNPDEEHYARI--IDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608

Query: 674 N----GEETLKLFEDMKAH 688
           N     E   +LFE    H
Sbjct: 609 NIDLGIEAAERLFELKPQH 627



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 202/500 (40%), Gaps = 107/500 (21%)

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
           L+ +  +    + +L + +H   + SGF     + N LI++YSK                
Sbjct: 17  LLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSK---------------- 60

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD-G 454
               SS L    +L  +I     + D VA     T LI  Y   G +  +  +F +   G
Sbjct: 61  ----SSKLNYARYLFDEIP----QPDIVA----RTTLIAAYSAAGDLKLSRKIFSDTPLG 108

Query: 455 F-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL-MLKQGK 512
             D   +NAMI  Y  +++ H A+ELF  M     R D  T  + + A   +    K  +
Sbjct: 109 MRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQ 168

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGA---------MVDAQSIFNDIPAPDDVAWTT 563
           Q+H   +KSG      V + ++  YVKC A         M +A+ +F+++P  D+++WTT
Sbjct: 169 QLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTT 228

Query: 564 MISGCVDNGEEDL-------------------------------ALSIYHQMRLSGVVPD 592
           +I+G V N + D                                A  ++ +M +S +  D
Sbjct: 229 IITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLD 288

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAY 648
           EFTF  ++   +       G+++HA  +K   +  P V +    +L+  Y KCG ++ A 
Sbjct: 289 EFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQ 348

Query: 649 ILFKQMDMRNTVLWN-------------------------------AMLVGLAQHGNGEE 677
            +F +M  R+ V WN                                M+ GLAQ G  EE
Sbjct: 349 EIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEE 408

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            LK F  MK  G EP    F G + +CS  G +    +  H    +YG E  +   + L+
Sbjct: 409 ALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ-LHAQVVRYGYESSLSAGNALI 467

Query: 738 DALGRAGRTKEAGELILSMP 757
               R G    A  L ++MP
Sbjct: 468 TMYARCGVVDAAHCLFINMP 487


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 260/864 (30%), Positives = 416/864 (48%), Gaps = 132/864 (15%)

Query: 181 VHGYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           VH +A+  G +   D F++  L+ +Y K G++ +A+ LFDGM  R V  W  ++ AY  +
Sbjct: 80  VHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSS 139

Query: 239 GFGEEVFHLFVDLH---RSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIK----- 287
           G   E   ++  +     SG+ PD  ++  VL   GV  D   R   +V   A+K     
Sbjct: 140 GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGD--GRCGCEVHGLAVKHGLDR 197

Query: 288 ------------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                                     L ++  +V  WN  +SG LQ G    A++ F  M
Sbjct: 198 STFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGM 257

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            R+ +  +S T +  L        LNLG+++H   LKSG     I  N+L+ MY+K G V
Sbjct: 258 QRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG-SEVNIQCNALLVMYTKCGRV 316

Query: 384 -----------------------C--------------------GLRTDQFTLASVLRAS 400
                                  C                    G + D   + S+  A 
Sbjct: 317 DSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAV 376

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             L   L+  K++H +AIK    +D+ V   L+D+Y +   +  + ++F+     D  +W
Sbjct: 377 GHLGWLLN-GKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISW 435

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
             +I  Y  S+   +ALE+F      G ++D + I + ++AC  L  +   KQ+H YA++
Sbjct: 436 TTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIR 495

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +G  LDL V + I+D+Y +CG +  +  +F  +   D V WT+MI+   ++G  + AL +
Sbjct: 496 NGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVL 554

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           + +M+ + V PD      ++ A   L++L +G+++H  LI+ +   +  +  SLVDMY+ 
Sbjct: 555 FAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSG 614

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG++  A  +F  +  ++ VLW AM+     HG+G++ + LF+ M   GV PD V+F+ +
Sbjct: 615 CGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLAL 674

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           L ACS++ LV+E      +M   Y +EP  EHY+ +VD LGR+G+T+EA E I SMP + 
Sbjct: 675 LYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKP 734

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            + +  +LLGACRV  + E     A +L+ LEP +   YVL+SN+FA   +W++    R 
Sbjct: 735 KSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRA 794

Query: 821 EMKRKNVKKDP-----------------------ADLIFAKVEGLIKRI-KEGGYVPDTD 856
            +  + ++KDP                       A+ I  K+  + +R+ KEGGY  DT 
Sbjct: 795 RISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTR 854

Query: 857 FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLY 901
            VL DV EEEK   L+ HSE+LA ++GLI+T P   +   K                 L+
Sbjct: 855 SVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLF 914

Query: 902 --------ANRFHHLRDGMCPCAD 917
                   ANRFHH   G C C D
Sbjct: 915 DRDIVVRDANRFHHFSGGSCSCGD 938



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 192/699 (27%), Positives = 318/699 (45%), Gaps = 92/699 (13%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA    S +  D FL   L+ MY +CG +  AR LFD M  R + SWN+++ AY  SG  
Sbjct: 83  HAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSG-- 140

Query: 136 NAENVTEGFRLFRSLRESI---TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
              +  E   ++R++R S          TLA +LK     G       VHG A+K GL  
Sbjct: 141 ---SACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDR 197

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
             FV+ AL+ +Y+K G +  A  +F+ M + RDV  W  M+    +NG   +   LF  +
Sbjct: 198 STFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGM 257

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRH--------------EEQVQAYAIKLLLYNNNSNV 297
            R+ L  +  +   VL V ++L + +              E  +Q  A+ L++Y     V
Sbjct: 258 QRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNAL-LVMYTKCGRV 316

Query: 298 ---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                          + WN  LS Y+Q G    AIE    M+R   Q D    +   +AV
Sbjct: 317 DSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAV 376

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK----------------------- 379
                L  G+++H   +K    S   VGN+L++MY K                       
Sbjct: 377 GHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWT 436

Query: 380 --MGCVC------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
             + C                    G++ D   + S+L A S L E + L+KQ+H +AI+
Sbjct: 437 TIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGL-ETILLAKQLHCYAIR 495

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           N  + D  V   +ID+Y   G +  +  +FE  +  D+ TW +MI  Y  S   ++AL L
Sbjct: 496 NGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVL 554

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F+ M ++  + D + + + + A G L  L +GK++H + ++  F ++  + S ++DMY  
Sbjct: 555 FAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSG 614

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG++  A  +FN +   D V WT MI+    +G    A+ ++ +M  +GV PD  +F  L
Sbjct: 615 CGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLAL 674

Query: 600 VKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           + A S    + +G+    +  +  +L+   + +  +  VD+  + G  E+AY   K M +
Sbjct: 675 LYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACV--VDLLGRSGQTEEAYEFIKSMPL 732

Query: 657 R-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +  +V+W ++L     H N E  L +    +   +EPD+
Sbjct: 733 KPKSVVWCSLLGACRVHKNHE--LAVVAANRLLELEPDN 769



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 135/621 (21%), Positives = 255/621 (41%), Gaps = 91/621 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           S+L+ +    D   G   H   +        F+ N L+ MY++CG L  A R+F+ M D 
Sbjct: 169 SVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDG 228

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RD+ SWNS+++    +G        +   LFR ++ ++   +  T   +L++C     + 
Sbjct: 229 RDVASWNSMISGCLQNGM-----FLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLN 283

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +H   LK G   +     AL+ +Y+K G++  A  +F  + E+D + W  ML  Y 
Sbjct: 284 LGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYV 342

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNNNS 295
           +NG   E      ++ R G  PD   +  +   +  LG   + ++V AYAIK  L ++  
Sbjct: 343 QNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQ 402

Query: 296 ----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       + + W   ++ Y Q   +  A+E F    +  
Sbjct: 403 VGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEG 462

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
           ++ D +     L A +G + + L +Q+H   +++G    ++V N +I++Y + G V    
Sbjct: 463 IKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLD-LVVKNRIIDIYGECGEVYHSL 521

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHL----------- 409
                                   GL  +   L + ++++   P+ + L           
Sbjct: 522 KMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLS 581

Query: 410 ----SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
                K++H   I+ +   +  + ++L+D+Y   GS++ A  +F      D+  W AMI 
Sbjct: 582 SLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMIN 641

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-----QMHAYAMK 520
              +  +  +A++LF  M  +G   D ++    + AC    ++ +GK      M  Y ++
Sbjct: 642 ATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLE 701

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
              E   CV    +D+  + G   +A      +P  P  V W +++  C  +   +LA  
Sbjct: 702 PWQEHYACV----VDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELA-- 755

Query: 580 IYHQMRLSGVVPDEFTFAILV 600
           +    RL  + PD     +LV
Sbjct: 756 VVAANRLLELEPDNPGNYVLV 776



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 15/215 (6%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           + Y N    + +L+ F +         S    SIL      S L  GK  H  ++  +  
Sbjct: 540 NCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFH 599

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
            +  + ++L+ MYS CGSL  A ++F+ +  +D++ W +++ A    G G      +   
Sbjct: 600 MEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGK-----QAID 654

Query: 146 LFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           LF+ + ++      ++   LL  C     ++ G  +    +  Y L+    W E  +  +
Sbjct: 655 LFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLE---PWQEHYA-CV 710

Query: 201 VNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           V++  + G+  EA      M  +   V+W  +L A
Sbjct: 711 VDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGA 745


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 252/827 (30%), Positives = 406/827 (49%), Gaps = 140/827 (16%)

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQ 282
           W  +LR+   +    E    ++D+   G+ PD+ +   +L  ++DL     GK+    V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 283 AYAI-------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
            +                           K+    +  N V WN  +S          A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 318 ECFVNMIRSNVQYDSVTFL-VALAA--VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
           E F  M+  +V+  S T + VALA       + L +G+Q+H   L+ G  ++ I+ N+L+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII-NTLV 239

Query: 375 NMYSKMG-------------------------CVC------------------GLRTDQF 391
            MY KMG                          +C                  G+  D F
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFE 450
           T++SVL A S L E L   K++H +A+KN ++  +SFV +AL+D+YC    +     +F+
Sbjct: 300 TISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFD 358

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLK 509
                 +  WNAMI GY  +    +AL LF  M  S   L +  T+A  V AC       
Sbjct: 359 GMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFS 418

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           + + +H + +K G + D  V + ++DMY + G +  A+ IF  +   D V W T+I+G V
Sbjct: 419 KKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478

Query: 570 DNGEEDLALSIYHQMRL-----------SGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            +   + AL + H+M++             + P+  T   ++ + + L+AL +G++IHA 
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            IK + ++D  VG +LVDMYAKCG ++ +  +F Q+ +RN + WN +++    HGN ++ 
Sbjct: 539 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDA 598

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           + +   M   GV+P+ VTFI V +ACS++G+V+E  + F+ M++ YG+EP  +HY+ +VD
Sbjct: 599 IDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVD 658

Query: 739 ALGRAGRTKEAGELILSMP--FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
            LGRAGR KEA +LI  +P  F+  A    +LLGACR+  + E G+  A+ L+ LEP  +
Sbjct: 659 LLGRAGRVKEAYQLINLIPRNFD-KAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVA 717

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
           S YVLL+NI+++A  W   T  R  MK + V+K+P                       ++
Sbjct: 718 SHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 777

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            +   +E L +R+++ GY+PDT  VL +VEE+EKE  L  HSEKLA A+G+++T P ++I
Sbjct: 778 KLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 837

Query: 894 LSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
              K     N                       RFHH ++G C C D
Sbjct: 838 RVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGD 884



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 179/391 (45%), Gaps = 56/391 (14%)

Query: 57  FSILRHAISTSD------LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           F+++  A++ S+      LL+GK  HA  L   ++ + F+ N L+ MY + G L  ++ L
Sbjct: 196 FTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGEL-NSFIINTLVAMYGKMGKLASSKVL 254

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
                 RDL++WN++L++   +     E   E     R +          T++ +L  C 
Sbjct: 255 LGSFEGRDLVTWNTVLSSLCQN-----EQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309

Query: 171 SSGYVWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
               +   + +H YALK G L  + FV  ALV++Y    ++     +FDGM +R + LW 
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWN 369

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
            M+  YA+N + EE   LF+++  S GL  +  ++  V+      G    +E +  + +K
Sbjct: 370 AMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVK 429

Query: 288 -------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIEC 319
                        + +Y+                + ++V WN  ++GY+    +  A+  
Sbjct: 430 RGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLM 489

Query: 320 FVNM-----------IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
              M            R +++ +S+T +  L + A    L  G++IH   +K+   + V 
Sbjct: 490 LHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 549

Query: 369 VGNSLINMYSKMGCVCGLRT--DQFTLASVL 397
           VG++L++MY+K GC+   R   DQ  + +V+
Sbjct: 550 VGSALVDMYAKCGCLQMSRKVFDQIPIRNVI 580



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 155/351 (44%), Gaps = 58/351 (16%)

Query: 69  LLLGKSTHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L  GK  HA  L N S   + F+ + L+ MY  C  ++   R+FD M DR +  WN+++ 
Sbjct: 314 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            YA +     E   E   LF  + ES     +  T+A ++  C+ SG     E +HG+ +
Sbjct: 374 GYAQN-----EYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVV 428

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K GL  D FV  AL+++YS+ GKI  AK +F  M++RD+V W  ++  Y  +   E+   
Sbjct: 429 KRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALL 488

Query: 247 LFVDLH-----------RSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYN 292
           +   +            R  L P+  ++  +L     +S L K  E  + AYAIK  L  
Sbjct: 489 MLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE--IHAYAIKNNLAT 546

Query: 293 NNS----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           + +                            NV+ WN  +  Y   G++  AI+    M+
Sbjct: 547 DVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMM 606

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKSGFYSAVI 368
              V+ + VTF+   AA + +  +N G +I       +G    S  Y+ V+
Sbjct: 607 VQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVV 657



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           + S  S   +S    +IL    + S L  GK  HA  + ++   D  + + L+ MY++CG
Sbjct: 503 RASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 562

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
            L  +R++FD++P R++I+WN I+ AY   G     N  +   + R +       + +T 
Sbjct: 563 CLQMSRKVFDQIPIRNVITWNVIVMAYGMHG-----NSQDAIDMLRMMMVQGVKPNEVTF 617

Query: 163 APLLKLCLSSGYV 175
             +   C  SG V
Sbjct: 618 ISVFAACSHSGMV 630


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/590 (36%), Positives = 322/590 (54%), Gaps = 51/590 (8%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECF-----VNMIRSNVQYDSVTFLVALAAVAGTDN 347
           NN +VV WN  ++ + Q   +  ++        + M    +  ++ T      A +   +
Sbjct: 72  NNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSD 131

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------------------- 384
              G+Q H   +K+     V   +SL+NMY K G V                        
Sbjct: 132 SRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISG 191

Query: 385 ----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
                                 G   ++F   SVL A +     ++  +Q+H  A+KN  
Sbjct: 192 YASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYML-VNTGRQVHSLAMKNGL 250

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V    V+ AL+ +Y + GS+ +A   FE     +  TW+AM+ G+    +S KAL+LF  
Sbjct: 251 VCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYD 310

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           MH SGE   E T+   + AC     + +G+QMH Y++K G+EL L V S ++DMY KCG+
Sbjct: 311 MHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGS 370

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +VDA+  F  I  PD V WT++I+G V NG+ + AL++Y +M+L GV+P++ T A ++KA
Sbjct: 371 IVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKA 430

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            S L AL+QG+Q+HA +IK + S +  +G +L  MYAKCG+++D Y +F +M  R+ + W
Sbjct: 431 CSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISW 490

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NAM+ GL+Q+G G E L+LFE M   G +PD+VTF+ +LSACS+ GLV   +  F +M +
Sbjct: 491 NAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFD 550

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
           ++ I P VEHY+ +VD L RAG+  EA E I S   +    + R LL A +   D + G 
Sbjct: 551 EFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGA 610

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +  EKLM L   +SSAYVLLS+I+ A  +W+DV   RG MK + V K+P 
Sbjct: 611 YAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPG 660



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 235/552 (42%), Gaps = 90/552 (16%)

Query: 39  LPFLQKSHFSSSSSSSQWFSILR---HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           +P L  SH        Q   +LR   H      L  G++ HARIL +       + N+L+
Sbjct: 1   MPLLPLSH--------QHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLI 52

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS-GEGNAENVTEGFRLFRSLRESI 154
            +Y++C     A  +FD + ++D++SWN ++ A++       + +V   FR      ++I
Sbjct: 53  NLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTI 112

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  TL  +     +     A    H  A+K     D F + +L+N+Y K G + EA+
Sbjct: 113 VPNAH-TLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEAR 171

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LFD M ER+ V W  M+  YA     +E F LF  L R      +E+      V+S L 
Sbjct: 172 DLFDEMPERNAVSWATMISGYASQELADEAFELF-KLMRHEEKGKNENEFVFTSVLSALT 230

Query: 275 ----KRHEEQVQAYAIK-------------LLLY---------------NNNSNVVLWNK 302
                    QV + A+K             + +Y               + N N + W+ 
Sbjct: 231 CYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSA 290

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            ++G+ Q GD+  A++ F +M +S       T +  + A +    +  G+Q+HG +LK G
Sbjct: 291 MVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLG 350

Query: 363 FYSAVIVGNSLINMYSKMGCVC-------------------------------------- 384
           +   + V ++L++MY+K G +                                       
Sbjct: 351 YELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYG 410

Query: 385 -----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                G+  +  T+ASVL+A S+L   L   KQ+H   IK +   +  + +AL  +Y + 
Sbjct: 411 KMQLGGVIPNDLTMASVLKACSNLA-ALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKC 469

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           GS+ +   +F      D+ +WNAMI G   +   ++ LELF  M   G + D +T    +
Sbjct: 470 GSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLL 529

Query: 500 KACGCLLMLKQG 511
            AC  + ++ +G
Sbjct: 530 SACSHMGLVDRG 541



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 16/277 (5%)

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
            SH H        + +  A+  C     L++G+ +HA  + +G      +++ ++++Y K
Sbjct: 6   LSHQH--------LQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAK 57

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL-----SGVVPDEF 594
           C     A  +F+ I   D V+W  +I+          +L + H  R        +VP+  
Sbjct: 58  CSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAH 117

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T   +  A+S L+    GRQ HA  +K  CS D F   SL++MY K G + +A  LF +M
Sbjct: 118 TLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEM 177

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK--AHGVEPDSVTFIGVLSACSYTGLVSE 712
             RN V W  M+ G A     +E  +LF+ M+    G   +   F  VLSA +   LV+ 
Sbjct: 178 PERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNT 237

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             +  H +  K G+   V   + LV    + G  ++A
Sbjct: 238 GRQ-VHSLAMKNGLVCIVSVANALVTMYVKCGSLEDA 273



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 31/191 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILN---SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           S+L+   + + L  GK  HA I+    S +IP   + + L  MY++CGSL    R+F +M
Sbjct: 426 SVLKACSNLAALDQGKQMHAGIIKYNFSLEIP---IGSALSAMYAKCGSLDDGYRIFWRM 482

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P RD+ISWN++++  + +G GN     EG  LF  +    T    +T   LL  C   G 
Sbjct: 483 PARDVISWNAMISGLSQNGRGN-----EGLELFEKMCLEGTKPDNVTFVNLLSACSHMGL 537

Query: 175 V---WASETVHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAK-FLFDGMQER 223
           V   W         +   +++DEF           +V+I S+ GK+ EAK F+     + 
Sbjct: 538 VDRGW---------VYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDH 588

Query: 224 DVVLWKVMLRA 234
            + LW+++L A
Sbjct: 589 GLCLWRILLAA 599


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/713 (32%), Positives = 356/713 (49%), Gaps = 91/713 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VVLWN  +  Y   G    +I  +++M++  V   + TF   L A +    L LG+ IH
Sbjct: 71  SVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIH 130

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--------------------------- 388
                 G    + V  +L++MY+K G +   +T                           
Sbjct: 131 THAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHAL 190

Query: 389 --------DQFTLASVLRASSSL---------PEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                    Q   A V   SS+L            LH  K IH + I+N    +  + TA
Sbjct: 191 HAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTA 250

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERL 490
           L+D+Y +   +  A  +F   +  +   W+AMI GY+L ++   AL L+  M    G   
Sbjct: 251 LLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNP 310

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
              T+AT ++AC  L  LK+GK++H + +KSG +LD  V + ++ MY KCG M +A    
Sbjct: 311 TPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFL 370

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           +++ A D V+++ +ISGCV NG  + AL I+ QM+ SG+ P   T   L+ A S L AL+
Sbjct: 371 DEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQ 430

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G   H   +    ++D  +  +++DMY+KCG I  +  +F +M  R+ + WN M++G  
Sbjct: 431 HGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYG 490

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG   E L LF++++A G++PD VT I VLSACS++GLV+E    F  M + + I+P +
Sbjct: 491 IHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRM 550

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
            HY  +VD L RAG   EA   I  MPF  +  +  ALL ACR   + E G+ V++K+  
Sbjct: 551 AHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQL 610

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------- 831
           L P  +  +VL+SNI+++  +WDD    R   +    KK P                   
Sbjct: 611 LGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQ 670

Query: 832 ----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               +  I  K++ L+ ++K+ GY  D+ FVL DVEEEEKE+ L YHSEK+A A+G+++T
Sbjct: 671 SHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNT 730

Query: 888 PPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            PSS IL  K                           A+RFHH +DG+C C D
Sbjct: 731 SPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQD 783



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 127/560 (22%), Positives = 238/560 (42%), Gaps = 85/560 (15%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           AR +FD++P   ++ WN ++  YA SG        +   L+  + +     +  T   LL
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGP-----FQQSIYLYLHMLQLGVTPTNFTFPFLL 114

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM--QERD 224
           K C S   +     +H +A  +GL  D +VS AL+++Y+K G + +A+ LF+ +  Q+RD
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQA 283
           +V W  M+ A++ +    +  H    + ++G+ P+  ++  +L  I      H+ + + A
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHA 234

Query: 284 YAIK---------------------LLLYN-------NNSNVVLWNKKLSGYLQVGDNHG 315
           Y I+                     LL Y        N  N V W+  + GY+       
Sbjct: 235 YYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISD 294

Query: 316 AIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
           A+  + +M+    +     T    L A A   +L  G+++H   +KSG      VGNSLI
Sbjct: 295 ALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLI 354

Query: 375 NMYSKM--------------------------GCV-----------------CGLRTDQF 391
           +MY+K                           GCV                  G+     
Sbjct: 355 SMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLE 414

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T+ ++L A S L   L      H + +      D+ +  A+ID+Y + G +  +  +F+ 
Sbjct: 415 TMIALLPACSHL-AALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDR 473

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D+ +WN MI GY +     +AL LF  +   G + D++T+   + AC    ++ +G
Sbjct: 474 MQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEG 533

Query: 512 KQMHAYAMKSGFELDLCVSSGI--LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           K   + +M   F +   ++  I  +D+  + G + +A +    +P  P+   W  +++ C
Sbjct: 534 KYWFS-SMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAAC 592

Query: 569 VDNGEEDLALSIYHQMRLSG 588
             +   ++   +  +++L G
Sbjct: 593 RTHKNIEMGEQVSKKIQLLG 612



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 178/399 (44%), Gaps = 11/399 (2%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
            S   H H + +   A    +T L   +     +  A ++F+      +  WN MI  Y 
Sbjct: 28  FSPHPHPHRVSDSDAA----ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYA 83

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
            S    +++ L+ HM   G      T    +KAC  L  L+ G+ +H +A   G  +DL 
Sbjct: 84  WSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLY 143

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRL 586
           VS+ +L MY KCG +  AQ++FN I   D   VAW  MI+    +      +    QM+ 
Sbjct: 144 VSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQ 203

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           +GV P+  T   ++       AL QG+ IHA  I+     +  +  +L+DMYAKC  +  
Sbjct: 204 AGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFY 263

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVEPDSVTFIGVLSACS 705
           A  +F  ++ +N V W+AM+ G   H +  + L L++DM   +G+ P   T   +L AC+
Sbjct: 264 ARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACA 323

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
               +    +  H    K G++ +    + L+    + G    A   +  M  + + S +
Sbjct: 324 QLTDLKRG-KKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVS-Y 381

Query: 766 RALLGACRVQGDTETGKWVAEKLMA--LEPFDSSAYVLL 802
            A++  C   G  E    +  ++ +  + P+  +   LL
Sbjct: 382 SAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALL 420



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR     +DL  GK  H  ++ S    D  + N+L++MY++CG +  A    D+M  +
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAK 376

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +S+++I++    +G        +   +FR ++ S       T+  LL  C     +  
Sbjct: 377 DTVSYSAIISGCVQNGYAE-----KALLIFRQMQSSGIAPYLETMIALLPACSHLAALQH 431

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
               HGY +  G   D  +  A++++YSK GKI  ++ +FD MQ RD++ W  M+  Y  
Sbjct: 432 GTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGI 491

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G   E   LF +L   GL PDD ++  VL   S  G
Sbjct: 492 HGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSG 528



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/437 (21%), Positives = 189/437 (43%), Gaps = 50/437 (11%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           + +SS   SIL      + L  GK+ HA  + +    +  L   L+ MY++C  L YAR+
Sbjct: 207 TPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARK 266

Query: 110 LFDKMPDRDLISWNSILAAYA-HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           +F+ +  ++ + W++++  Y  H    +A  + +       L  +       TLA +L+ 
Sbjct: 267 IFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPA-----TLATMLRA 321

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     +   + +H + +K G+  D  V  +L+++Y+K G +  A    D M  +D V +
Sbjct: 322 CAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSY 381

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
             ++    +NG+ E+   +F  +  SG+ P  E++  +L   S L   +H      Y + 
Sbjct: 382 SAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVV 441

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
               N+ S   + N  +  Y + G    + E F  M   +              +   + 
Sbjct: 442 RGFTNDTS---ICNAIIDMYSKCGKITISREIFDRMQNRD--------------IISWNT 484

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LP 404
           + +G  IHG  +++            ++++ ++  + GL+ D  TL +VL A S    + 
Sbjct: 485 MIIGYGIHGLCVEA------------LSLFQELQAL-GLKPDDVTLIAVLSACSHSGLVT 531

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           EG +    +     +N  +         ++D+  R G++ EA Y F  +  F     N  
Sbjct: 532 EGKYWFSSMS----QNFNIKPRMAHYICMVDLLARAGNLDEA-YTFIQRMPF---VPNVR 583

Query: 464 IFGYILSN-NSHKALEL 479
           I+G +L+   +HK +E+
Sbjct: 584 IWGALLAACRTHKNIEM 600



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 172/398 (43%), Gaps = 41/398 (10%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGK--ST 75
           V+  +    TY     F  S+  +L       + ++  +  +L+   S   L LG+   T
Sbjct: 72  VVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHT 131

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSG 133
           HA IL  S   D +++  L+ MY++CG L  A+ LF+ +   DRD+++WN+++AA++   
Sbjct: 132 HAHILGLSM--DLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHA 189

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
             +A+ +         ++++    +  TL  +L     +  +   + +H Y ++     +
Sbjct: 190 L-HAQTIHS----VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDN 244

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD-LH 252
             +  AL+++Y+K   +  A+ +F+ + +++ V W  M+  Y  +    +   L+ D L 
Sbjct: 245 VVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLC 304

Query: 253 RSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNSNVVLWNK----- 302
             GL P   ++  +L   + L     GK+    +    + L     NS + ++ K     
Sbjct: 305 IYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMD 364

Query: 303 -------------------KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                               +SG +Q G    A+  F  M  S +     T +  L A +
Sbjct: 365 NAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACS 424

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
               L  G   HG T+  GF +   + N++I+MYSK G
Sbjct: 425 HLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCG 462


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 238/758 (31%), Positives = 375/758 (49%), Gaps = 80/758 (10%)

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           +I    R   A LL+L      +     VHG  +  GL  D ++S  L+N+YS+ G +  
Sbjct: 38  TIGIRGRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVY 97

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL-CPDDESVQCVLGVIS 271
           A+ +F+ M ER++V W  M+ A   +GF EE   +F+D  R+    P++  +   +   S
Sbjct: 98  ARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACS 157

Query: 272 DL---GKRHEEQVQAYAIK-----------LLL--YNNNSNV---------------VLW 300
            L   G+    Q+Q++ +K           LL+  Y    N+               V W
Sbjct: 158 GLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTW 217

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +SG +++G ++ +++ F  ++  NV  D       L+A +    L  G+QIH   L+
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277

Query: 361 SGFYSAVIVGNSLINMYSKMGCV------------------------------------- 383
            G      + N LI+ Y K G V                                     
Sbjct: 278 YGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMEL 337

Query: 384 ------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                  GL+ D F  +S+L + +SL   L    Q+H + IK +   DS+V+ +LID+Y 
Sbjct: 338 FTSMPKFGLKPDMFACSSILTSCASL-HALEFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS---HKALELFSHMHTSGERLDEIT 494
           +   + EA  +F+     D+  +NAMI GY         H AL +F  M     R   +T
Sbjct: 397 KCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLT 456

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
             + ++A   L  L   KQ+H    K G  LD+   S ++ +Y  C  + D++ +F+++ 
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMK 516

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V W +M SG V   E + AL+++ +++LS   PDEFTF  +V A+  L +L+ G++
Sbjct: 517 VKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQE 576

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H  L+K     +P++  +L+DMYAKCG+ EDA+  F     R+ V WN+++   A HG 
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G + L++ E M   G+EP+ +TF+GVLSACS+ GLV +  + F LM  ++GIEPE EHY 
Sbjct: 637 GRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYV 695

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +V  LGRAGR  EA ELI  MP + +A + R+LL  C   G+ E  ++ AE  +  +P 
Sbjct: 696 CMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPK 755

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           DS ++ LLSNI+A+   W D    R  MK + V K+P 
Sbjct: 756 DSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPG 793



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 186/703 (26%), Positives = 304/703 (43%), Gaps = 103/703 (14%)

Query: 72  GKSTHARILNSSQIP--------------------DRFLTNNLMTMYSRCGSLVYARRLF 111
           G+   AR+L    +                     D +L+N LM +YSR G +VYAR++F
Sbjct: 43  GRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVF 102

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-- 169
           +KMP+R+L++W+++++A  H G    E++      +R+ + S    +   L+  ++ C  
Sbjct: 103 EKMPERNLVTWSTMVSACNHHG-FYEESLVVFLDFWRTRKNS---PNEYILSSFIQACSG 158

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           L     W    +  + +K     D +V   L++ Y K G I  A+ +FD + E+  V W 
Sbjct: 159 LDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWT 218

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAY 284
            M+    + G       LF  L    + PD   +  VL   S L     GK+    +  Y
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278

Query: 285 ------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                                   A KL     N N++ W   LSGY Q   +  A+E F
Sbjct: 279 GHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELF 338

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            +M +  ++ D       L + A    L  G Q+H  T+K+   +   V NSLI+MY+K 
Sbjct: 339 TSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398

Query: 381 GCVCG----------------------------------------------LRTDQFTLA 394
            C+                                                +R    T  
Sbjct: 399 DCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFV 458

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S+LRAS+SL   L LSKQIH    K     D F  +ALI VY     + ++  +F+    
Sbjct: 459 SLLRASASLT-SLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKV 517

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            DL  WN+M  GY+  + + +AL LF  +  S +R DE T    V A G L  L+ G++ 
Sbjct: 518 KDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEF 577

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           H   +K G E +  +++ +LDMY KCG+  DA   F+   + D V W ++IS   ++GE 
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
             AL +  +M   G+ P+  TF  ++ A S    +E G +    +++     +    + +
Sbjct: 638 RKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCM 697

Query: 635 VDMYAKCGNIEDAYILFKQMDMRN-TVLWNAMLVGLAQHGNGE 676
           V +  + G + +A  L ++M  +   ++W ++L G A+ GN E
Sbjct: 698 VSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 31/315 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    S   L  G   HA  + ++   D ++TN+L+ MY++C  L  AR++FD     
Sbjct: 355 SILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAAD 414

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++ +N+++  Y  S  G    + +   +F  +R  +   S LT   LL+   S   +  
Sbjct: 415 DVVLFNAMIEGY--SRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGL 472

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           S+ +HG   K GL  D F   AL+ +YS    +++++ +FD M+ +D+V+W  M   Y +
Sbjct: 473 SKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQ 532

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLLLYN 292
               EE  +LF++L  S   PD+ +   ++    +     LG+    Q+    ++   Y 
Sbjct: 533 QSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYI 592

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            N+                        +VV WN  +S Y   G+   A++    M+   +
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGI 652

Query: 329 QYDSVTFLVALAAVA 343
           + + +TF+  L+A +
Sbjct: 653 EPNYITFVGVLSACS 667



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           + L LG+  H ++L      + ++TN L+ MY++CGS   A + FD    RD++ WNS++
Sbjct: 569 ASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           ++YA+ GEG      +  ++   +       + +T   +L  C  +G V          L
Sbjct: 629 SSYANHGEGR-----KALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD-VVLWKVMLRAYAENG 239
           + G+  +      +V++  + G++ EA+ L + M  +   ++W+ +L   A+ G
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAG 737


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 259/913 (28%), Positives = 437/913 (47%), Gaps = 136/913 (14%)

Query: 136 NAENVTEGFRLFRSLRESITFTS----RLTLAPLLKLCLSSGYVWASETVHGY-ALKIGL 190
           N  N+ + F   +S    +  +S    +  +  LL+LC     +     +H + +     
Sbjct: 66  NTGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHF 125

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  +   LV +YS      ++  +F+  + +++ LW  +L  Y  N    +   +FV+
Sbjct: 126 QNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVE 185

Query: 251 L-HRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
           +   +   PD+ ++ CV+   +     R  E V  +A+K  +    S+V + N  ++ Y 
Sbjct: 186 MISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVL---SDVFVGNALIAMYG 242

Query: 309 QVGDNHGAIECFVNMIRSN-VQYDSV--------------------------------TF 335
           + G    A++ F  M + N V ++SV                                T 
Sbjct: 243 KFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATM 302

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT------- 388
           +  +   A    + LG   HG  LK G    + V +SL++MYSK G +C  R        
Sbjct: 303 VTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEK 362

Query: 389 ------------------------------------DQFTLASVLRASSSLPEGLHLSKQ 412
                                               ++ TL +VL       + L L K+
Sbjct: 363 NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKL-KE 421

Query: 413 IHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           IH +A+++  + +D  V+ A +  Y + GS+  AE +F   +   +++WNA+I G++ + 
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              KAL+L+  M  SG   D  TIA+ + AC  L  L  GK++H   +++GFELD  +  
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICI 541

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ +YV+CG ++ A+  F+++   + V W TMI+G   N     AL ++HQM  S + P
Sbjct: 542 SLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWP 601

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           DE +    + A S ++AL  G+++H   +K   +   FV  SL+DMYAKCG +E +  +F
Sbjct: 602 DEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIF 661

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            ++ ++  V WN ++ G   HG+G + ++LF+ M+  G  PDSVTFI +L+AC++ GLV+
Sbjct: 662 DRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVA 721

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  E    M+  +GI+P++EHY+ +VD LGRAGR  EA EL+  +P +  + +  +LL +
Sbjct: 722 EGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSS 781

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR   D + G+ VA KL+ L P  +  YVL+SN +A   +WD+V   R  MK   ++KD 
Sbjct: 782 CRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKD- 840

Query: 832 ADLIFAKVEG------------------------LIKRIKEGGYVPDTDFVLLDVEEEEK 867
           A   + ++ G                        L K+I + GY PDT  VL ++EE+EK
Sbjct: 841 AGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEK 900

Query: 868 ERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--R 904
            + L  HSEKLA ++GL++T   + +                     +  +E +  +  R
Sbjct: 901 IKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKR 960

Query: 905 FHHLRDGMCPCAD 917
           FHH ++G C C D
Sbjct: 961 FHHFKNGFCSCGD 973



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 193/713 (27%), Positives = 313/713 (43%), Gaps = 114/713 (15%)

Query: 48  SSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLV 105
           SS+S   Q   +L        ++ +G+  H  I  S     D  L   L+TMYS C S  
Sbjct: 87  SSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPY 146

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS----LRESITFTS--- 158
            +  +F+    ++L  WN++L+ Y  +             LFR       E I+ T    
Sbjct: 147 DSCLVFNASRRKNLFLWNALLSGYLRNS------------LFRDAVFVFVEMISLTEFVP 194

Query: 159 -RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
              TL  ++K C+    V   E VHG+ALK  ++ D FV  AL+ +Y KFG +  A  +F
Sbjct: 195 DNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVF 254

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS--GLCPDDESVQCVL-------- 267
           D M +R++V W  ++ A  ENG  EE + LF  L     GL PD  ++  V+        
Sbjct: 255 DKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGE 314

Query: 268 --------GVISDLGKRHEEQVQAYAI------------KLLLYNNNSNVVLWNKKLSGY 307
                   G+   LG   E +V +  +            ++L   N  NV+ WN  + GY
Sbjct: 315 VRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGY 374

Query: 308 LQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY-S 365
            +  D  GA E    M +   V+ + VT L  L            ++IHG  L+ GF  S
Sbjct: 375 SKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQS 434

Query: 366 AVIVGNSLINMYSKMGCV------------------------------------------ 383
             +V N+ +  Y+K G +                                          
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494

Query: 384 -CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             GL  D FT+AS+L A + L + L   K+IH   ++N    D F+  +L+ +Y + G +
Sbjct: 495 GSGLEPDLFTIASLLSACARL-KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKI 553

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A+  F+N +  +L  WN MI G+  +     AL++F  M +S    DEI+I  A+ AC
Sbjct: 554 LLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGAC 613

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             +  L+ GK++H +A+KS       V+  ++DMY KCG M  +Q+IF+ +    +V W 
Sbjct: 614 SQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWN 673

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            +I+G   +G    A+ ++  M+ +G  PD  TF  L+ A +    + +G +    +  L
Sbjct: 674 VLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSL 733

Query: 623 DCSSDPFVGIS--------LVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAML 666
                   GI         +VDM  + G + +A  L  ++ D  ++ +W+++L
Sbjct: 734 -------FGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 249/570 (43%), Gaps = 108/570 (18%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++ LG   H   L      +  + ++L+ MYS+CG L  AR LFD   ++++ISWNS++ 
Sbjct: 314 EVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIG 372

Query: 128 AYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            Y+        +    F L R ++ E     + +TL  +L +C         + +HGYAL
Sbjct: 373 GYSKD-----RDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYAL 427

Query: 187 KIGLVW-DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           + G +  DE V+ A V  Y+K G +  A+ +F GM+ + V  W  ++  + +NGF  +  
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKAL 487

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDL----------------GKRHEE---------Q 280
            L++ +  SGL PD  ++  +L   + L                G   +E          
Sbjct: 488 DLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY 547

Query: 281 VQAYAIKL--LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
           VQ   I L  L ++N    N+V WN  ++G+ Q      A++ F  M+ S +  D ++ +
Sbjct: 548 VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISII 607

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
            AL A +    L LG+++H   +KS       V  SLI+MY+K GC              
Sbjct: 608 GALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGC-------------- 653

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           +  S ++ + +HL  ++                                           
Sbjct: 654 MEQSQNIFDRVHLKGEV------------------------------------------- 670

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----K 512
             TWN +I GY +  +  KA+ELF  M  +G R D +T    + AC    ++ +G     
Sbjct: 671 --TWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLG 728

Query: 513 QMHA-YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
           QM + + +K   E   CV    +DM  + G + +A  + N++P  PD   W++++S C +
Sbjct: 729 QMQSLFGIKPKLEHYACV----VDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRN 784

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             + D+   + +++   G  PD+    +L+
Sbjct: 785 YRDLDIGEKVANKLLELG--PDKAENYVLI 812


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/682 (34%), Positives = 349/682 (51%), Gaps = 76/682 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N ++WN  L GY    D   A++ +V MI   +  +S TF   L + A
Sbjct: 18  YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK G+   + V  SLI+MY++ G                      
Sbjct: 78  KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNG---------------------- 115

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  + ++   +   D V+     TALI  Y  +G++  A+ +F+     D+ +WNAM
Sbjct: 116 --RLEDAHKVFDRSSHRDVVS----YTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAM 169

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  + +  +ALELF  M  +  R DE T+ T + AC     ++ G+Q+H++    GF
Sbjct: 170 ISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGF 229

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y KCG +  A  +F  +   D V+W T+I G         AL ++ +
Sbjct: 230 GSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 289

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAKC 641
           M  SG  P++ T   ++ A + L A++ GR IH  + K   D ++ P +  SL+DMYAKC
Sbjct: 290 MLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKC 349

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+IE A+ +F  M  ++   WNAM+ G A HG       LF  M+ +G+EPD +TF+G+L
Sbjct: 350 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLL 409

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS++G +      F  M + Y I P++EHY  ++D LG +G  KEA E+I +MP E  
Sbjct: 410 SACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPD 469

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             +  +LL ACR  G+ E  +  A  LM +EP +  +YVLLSNI+A A +WD+V   R  
Sbjct: 470 GVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRAL 529

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           +  K +KK P                          I+  +E +   ++E G+VPDT  V
Sbjct: 530 LNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEV 589

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------KE 898
           L ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K 
Sbjct: 590 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKR 649

Query: 899 PLYA---NRFHHLRDGMCPCAD 917
            + A    RFHH RDG+C C D
Sbjct: 650 EIIARDRTRFHHFRDGVCSCND 671



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 224/525 (42%), Gaps = 102/525 (19%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
           YA  +F  + + + + WN++L  YA S +          +L+  +       +  T   L
Sbjct: 18  YAISVFATIQEPNQLIWNTMLRGYALSSDP-----VSALKLYVVMISLGLLPNSYTFPFL 72

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LK C  S      + +HG+ LK+G   D +V  +L+++Y++ G++ +A  +FD    RDV
Sbjct: 73  LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYA 285
           V +  ++  YA +G       +F          D+  V+                     
Sbjct: 133 VSYTALITGYASSGNIRSAQEMF----------DEIPVK--------------------- 161

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
                     +VV WN  +SGY + G    A+E F  M+++NV+ D  T +  L+A A +
Sbjct: 162 ----------DVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQS 211

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---CGL---------------- 386
            ++ LG+Q+H      GF S + + N+LI++YSK G V   CGL                
Sbjct: 212 RSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLI 271

Query: 387 ------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK--N 420
                                     +  T+ S+L A + L   + + + IHV+  K   
Sbjct: 272 GGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLG-AIDIGRWIHVYIDKKLK 330

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           D      + T+LID+Y + G +  A  +F +     L++WNAMIFG+ +   ++   +LF
Sbjct: 331 DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLF 390

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILD 535
           S M  +G   D+IT    + AC     L  G+ +       Y +    E   C    ++D
Sbjct: 391 SRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGC----MID 446

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
           +    G   +A+ +   +P  PD V W +++  C  +G  +LA S
Sbjct: 447 LLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAES 491



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 38/256 (14%)

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           L+ CV S   D +        A S+F  I  P+ + W TM+ G   + +   AL +Y  M
Sbjct: 4   LEFCVLSPHFDGFPY------AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVM 57

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
              G++P+ +TF  L+K+ +   A E+G+QIH +++KL    D +V  SL+ MYA+ G +
Sbjct: 58  ISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRL 117

Query: 645 EDAYI-------------------------------LFKQMDMRNTVLWNAMLVGLAQHG 673
           EDA+                                +F ++ +++ V WNAM+ G A+ G
Sbjct: 118 EDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETG 177

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           + +E L+LF++M    V PD  T + VLSAC+ +  V E     H   + +G    ++  
Sbjct: 178 SYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSV-ELGRQVHSWIDDHGFGSNLKIV 236

Query: 734 SFLVDALGRAGRTKEA 749
           + L+D   + G+ + A
Sbjct: 237 NALIDLYSKCGQVETA 252



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G++  A+ +FD++P +D++SWN++++ YA +G    
Sbjct: 122 KVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETG---- 177

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            +  E   LF+ + ++       T+  +L  C  S  V     VH +    G   +  + 
Sbjct: 178 -SYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIV 236

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++YSK G++  A  LF+G+  +DVV W  ++  Y      +E   LF ++ RSG  
Sbjct: 237 NALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES 296

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLL-------------- 290
           P+D ++  +L   + LG             K+ ++   A +++  L              
Sbjct: 297 PNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAH 356

Query: 291 --YNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
             +N+  + ++  WN  + G+   G  +   + F  M ++ ++ D +TF+  L+A + + 
Sbjct: 357 QVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSG 416

Query: 347 NLNLGQQI 354
            L+LG+ I
Sbjct: 417 KLDLGRHI 424


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 250/846 (29%), Positives = 410/846 (48%), Gaps = 128/846 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL--ISWNSI 125
           +L LG++ H+ ++ S      F    L+ +Y++C SL  AR +F   P   L  +SW ++
Sbjct: 62  NLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTAL 121

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           ++ Y  +G  +     E   +F  +R S                                
Sbjct: 122 ISGYVQAGLPH-----EALHIFDKMRNSA------------------------------- 145

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE--RDVVLWKVMLRAYAENGFGEE 243
                V D+     ++N Y   GK+ +A  LF  M    R+VV W VM+  +A+    EE
Sbjct: 146 -----VPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEE 200

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LL 289
               F  + + G+     ++  VL  I+ L    H   V A+AIK             + 
Sbjct: 201 ALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLIN 260

Query: 290 LYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y                +  N+++WN  L  Y Q G     +E F++MI   +  D  T
Sbjct: 261 MYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFT 320

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------- 384
           +   L+  A  + L +G+Q+H   +K  F S + V N+LI+MY+K G +           
Sbjct: 321 YTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMT 380

Query: 385 ---------------------------------GLRTDQFTLASVLRASSSLPEGLHLSK 411
                                            G+  D+ +LAS+L A  ++ + L   +
Sbjct: 381 YRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNI-KVLEAGQ 439

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q H  ++K     + F  ++LID+Y + G + +A   + +     + + NA+I GY L  
Sbjct: 440 QFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYAL-K 498

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS- 530
           N+ +++ L   M   G +  EIT A+ +  C     +  G Q+H   +K G    LC S 
Sbjct: 499 NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGL---LCGSE 555

Query: 531 ---SGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRL 586
              + +L MY+    + DA  +F++  +    V WT +ISG + N   D+AL++Y +MR 
Sbjct: 556 FLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRD 615

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           + + PD+ TF  +++A + L++L  GR+IH+ +       D     +LVDMYAKCG+++ 
Sbjct: 616 NNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKS 675

Query: 647 AYILFKQMDMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +  +F+++  +  V+ WN+M+VG A++G  +  LK+F++M    + PD VTF+GVL+ACS
Sbjct: 676 SVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACS 735

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           + G V E  + F +M   YGIEP V+HY+ +VD LGR G  KEA E I  +  E +A + 
Sbjct: 736 HAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIW 795

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
             LLGACR+ GD + G+  A+KL+ LEP  SS YVLLSN++AA+  WD+  S R  M +K
Sbjct: 796 ANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKK 855

Query: 826 NVKKDP 831
           +++K P
Sbjct: 856 DIQKIP 861



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 188/660 (28%), Positives = 306/660 (46%), Gaps = 63/660 (9%)

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
            + + S   S     + T A  L  C     +     VH   +K GL    F  GAL+++
Sbjct: 32  LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91

Query: 204 YSKFGKIREAKFLFDG--MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           Y+K   +  A+ +F          V W  ++  Y + G   E  H+F D  R+   PD  
Sbjct: 92  YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIF-DKMRNSAVPDQV 150

Query: 262 SVQCVLGVISDLGKRHE--EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
           ++  VL     LGK  +  +  Q   I +       NVV WN  +SG+ +      A+  
Sbjct: 151 ALVTVLNAYISLGKLDDACQLFQQMPIPI------RNVVAWNVMISGHAKTAHYEEALAF 204

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  M +  V+    T    L+A+A    LN G  +H   +K GF S++ V +SLINMY K
Sbjct: 205 FHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGK 264

Query: 380 -------------------------MGCV------------------CGLRTDQFTLASV 396
                                    +G                    CG+  D+FT  S+
Sbjct: 265 CQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSI 324

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L   +   E L + +Q+H   IK    ++ FV+ ALID+Y + G++ EA   FE+    D
Sbjct: 325 LSTCACF-EYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRD 383

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
             +WNA+I GY+       A  LF  M   G   DE+++A+ + ACG + +L+ G+Q H 
Sbjct: 384 HISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHC 443

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG-CVDNGEED 575
            ++K G E +L   S ++DMY KCG + DA   ++ +P    V+   +I+G  + N +E 
Sbjct: 444 LSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKE- 502

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGIS 633
            ++++ H+M++ G+ P E TFA L+        +  G QIH  ++K  L C S+ F+G S
Sbjct: 503 -SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSE-FLGTS 560

Query: 634 LVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           L+ MY     + DA ILF +   +++ V+W A++ G  Q+   +  L L+ +M+ + + P
Sbjct: 561 LLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISP 620

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           D  TF+ VL AC+    + +  E  H +    G + +    S LVD   + G  K + ++
Sbjct: 621 DQATFVTVLQACALLSSLHDGRE-IHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQV 679



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 248/518 (47%), Gaps = 40/518 (7%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN ++ G          ++ + + + S    D  TF V L+A A   NL+LG+ +H   +
Sbjct: 16  WNWRVQGTKHYSSER-VLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP--------------- 404
           KSG  S      +LI++Y+K         +  T A  + AS+  P               
Sbjct: 75  KSGLESTSFCQGALIHLYAK--------CNSLTCARTIFASAPFPHLHTVSWTALISGYV 126

Query: 405 ------EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK--DGFD 456
                 E LH+  +     ++N  V D      +++ Y   G + +A  LF+       +
Sbjct: 127 QAGLPHEALHIFDK-----MRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRN 181

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN MI G+  + +  +AL  F  M   G +    T+A+ + A   L  L  G  +HA
Sbjct: 182 VVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHA 241

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           +A+K GFE  + V+S +++MY KC    DA+ +F+ I   + + W  M+     NG    
Sbjct: 242 HAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSN 301

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
            + ++  M   G+ PDEFT+  ++   +C   LE GRQ+H+ +IK   +S+ FV  +L+D
Sbjct: 302 VMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALID 361

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAK G +++A   F+ M  R+ + WNA++VG  Q         LF  M   G+ PD V+
Sbjct: 362 MYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVS 421

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
              +LSAC    ++ EA + FH +  K G+E  +   S L+D   + G  K+A +   SM
Sbjct: 422 LASILSACGNIKVL-EAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSM 480

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAE-KLMALEP 793
           P  +  S++ AL+    ++   E+   + E +++ L+P
Sbjct: 481 PERSVVSVN-ALIAGYALKNTKESINLLHEMQILGLKP 517



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 174/666 (26%), Positives = 301/666 (45%), Gaps = 56/666 (8%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F Q S     SS S   S+L    S + L  G   HA  +        ++ ++L+ MY +
Sbjct: 205 FHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGK 264

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           C     AR++FD +  +++I WN++L  Y  S  G   NV E   LF  +          
Sbjct: 265 CQMPDDARQVFDAISQKNMIVWNAMLGVY--SQNGFLSNVME---LFLDMISCGIHPDEF 319

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L  C    Y+     +H   +K     + FV+ AL+++Y+K G ++EA   F+ M
Sbjct: 320 TYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHM 379

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-E 279
             RD + W  ++  Y +       F LF  +   G+ PD+ S+  +L    ++      +
Sbjct: 380 TYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ 439

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
           Q    ++KL L    +N+   +  +  Y + GD   A + + +M   +V   SV  L+A 
Sbjct: 440 QFHCLSVKLGL---ETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVV--SVNALIA- 493

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS---V 396
                           G  LK+   S        IN+  +M  + GL+  + T AS   V
Sbjct: 494 ----------------GYALKNTKES--------INLLHEMQ-ILGLKPSEITFASLIDV 528

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADS-FVSTALIDVYCRNGSMAEAEYLFENKDGF 455
            + S+ +  GL    QIH   +K   +  S F+ T+L+ +Y  +  +A+A  LF      
Sbjct: 529 CKGSAKVILGL----QIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSL 584

Query: 456 -DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
             +  W A+I G+I +  S  AL L+  M  +    D+ T  T ++AC  L  L  G+++
Sbjct: 585 KSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREI 644

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGE 573
           H+    +GF+LD   SS ++DMY KCG +  +  +F ++    DV +W +MI G   NG 
Sbjct: 645 HSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGY 704

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH---ANLIKLDCSSDPFV 630
              AL ++ +M  S + PD+ TF  ++ A S    + +GRQI     N   ++   D + 
Sbjct: 705 AKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYA 764

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMK 686
              +VD+  + G +++A     ++++  N ++W  +L     HG+   G+   K   +++
Sbjct: 765 --CMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELE 822

Query: 687 AHGVEP 692
                P
Sbjct: 823 PQSSSP 828


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/610 (34%), Positives = 332/610 (54%), Gaps = 55/610 (9%)

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           I G TLK   + A+++      M+        ++ D+FT   +L+  S L + L   +QI
Sbjct: 96  IRGFTLKQSPHEAILL---FKEMHEN-----SVQPDEFTFPCILKVCSRL-QALSEGEQI 146

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H   +K    +  FV   LI +Y   G +  A  +F+     ++ TWN+M  GY  S N 
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW 206

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            + ++LF  M     R DE+T+ + + ACG L  L+ G+ ++ Y  + G + +  + + +
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +DMY KCG +  A+ +F+ +   D VAW+ MISG         AL ++H+M+ + + P+E
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            T   ++ + + L ALE G+ +H  + K        +G +L+D YAKCG++E +  +F +
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M ++N + W  ++ GLA +G G++ L+ F  M    VEP+ VTFIGVLSACS+ GLV E 
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F  M   +GIEP +EHY  +VD LGRAG  +EA + I +MP + +A + R LL +C+
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCK 506

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
           V  + E G+   ++L+ LEP  S  Y+LLSNI+A+  +W+D    RGEMK K +KK P  
Sbjct: 507 VHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGC 566

Query: 832 ---------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                ++ I+  +E ++K+IK  GYVP+T    LD EE++KE +
Sbjct: 567 SLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESS 626

Query: 871 LYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHH 907
           + +HSEKLA A+GLI +PP + I                     + N+E +  +  RFHH
Sbjct: 627 VSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHH 686

Query: 908 LRDGMCPCAD 917
            ++G C C D
Sbjct: 687 FKEGSCSCND 696



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 9/353 (2%)

Query: 412 QIHVHAIKN-----DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           +IH H IK        VA++ + +A I +     SM  A  +F   D  D   +N MI G
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILL---PTSMDYAVSIFRQIDEPDSPAYNIMIRG 98

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           + L  + H+A+ LF  MH +  + DE T    +K C  L  L +G+Q+HA  MK GF   
Sbjct: 99  FTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSH 158

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             V + ++ MY  CG +  A+ +F+++   +   W +M +G   +G  +  + ++H+M  
Sbjct: 159 GFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLE 218

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
             +  DE T   ++ A   L  LE G  I+  + +     +P +  SLVDMYAKCG ++ 
Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  LF QMD R+ V W+AM+ G +Q     E L LF +M+   ++P+ +T + +LS+C+ 
Sbjct: 279 ARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAV 338

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            G + E  +  H   +K  ++  V   + L+D   + G  + + E+   MP +
Sbjct: 339 LGAL-ETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVK 390



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 145/312 (46%), Gaps = 34/312 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA I+        F+ N L+ MY+ CG +  ARR+FD+M +R++ +WNS+ A Y  
Sbjct: 143 GEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTK 202

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           SG     N  E  +LF  + E       +TL  +L  C     +   E ++ Y  + GL 
Sbjct: 203 SG-----NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLK 257

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  +  +LV++Y+K G++  A+ LFD M  RDVV W  M+  Y++     E   LF ++
Sbjct: 258 GNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEM 317

Query: 252 HRSGLCPDDESVQCVLGVISDLG--------------KRHEEQVQA-------YA----- 285
            ++ + P++ ++  +L   + LG              KR +  V         YA     
Sbjct: 318 QKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSV 377

Query: 286 ---IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
              I++       NV+ W   + G    G    A+E F  M+  NV+ + VTF+  L+A 
Sbjct: 378 ESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSAC 437

Query: 343 AGTDNLNLGQQI 354
           +    ++ G+ +
Sbjct: 438 SHAGLVDEGRDL 449



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 113/522 (21%), Positives = 204/522 (39%), Gaps = 100/522 (19%)

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           S+ YA  +F ++ + D  ++N ++  +        ++  E   LF+ + E+       T 
Sbjct: 73  SMDYAVSIFRQIDEPDSPAYNIMIRGFTLK-----QSPHEAILLFKEMHENSVQPDEFTF 127

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             +LK+C     +   E +H   +K G     FV   L+++Y+  G++  A+ +FD M E
Sbjct: 128 PCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE 187

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLG----- 274
           R+V  W  M   Y ++G  EEV  LF ++    +  D+ ++  VL   G ++DL      
Sbjct: 188 RNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWI 247

Query: 275 KRHEEQ-------------VQAYAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDN 313
            R+ E+             V  YA         +L    +  +VV W+  +SGY Q    
Sbjct: 248 NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A++ F  M ++N+  + +T +  L++ A    L  G+ +H    K      V +G +L
Sbjct: 308 REALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTAL 367

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++ Y+K G V           S +     +P                  V +    T LI
Sbjct: 368 MDFYAKCGSV----------ESSIEVFGKMP------------------VKNVLSWTVLI 399

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
                NG                                  KALE F  M       +++
Sbjct: 400 QGLASNG-------------------------------QGKKALEYFYLMLEKNVEPNDV 428

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           T    + AC    ++ +G+ +     +  G E  +     ++D+  + G + +A     +
Sbjct: 429 TFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKN 488

Query: 553 IP-APDDVAWTTMISGC-----VDNGEEDLALSIYHQMRLSG 588
           +P  P+ V W T+++ C     V+ GEE L   I  +   SG
Sbjct: 489 MPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSG 530



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      +DL LG+  +  +       +  L  +L+ MY++CG +  ARRLFD+M  R
Sbjct: 230 SVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR 289

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+++W+++++ Y+      A    E   LF  ++++    + +T+  +L  C   G +  
Sbjct: 290 DVVAWSAMISGYSQ-----ASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALET 344

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH +  K  +     +  AL++ Y+K G +  +  +F  M  ++V+ W V+++  A 
Sbjct: 345 GKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLAS 404

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           NG G++    F  +    + P+D +   VL   S  G
Sbjct: 405 NGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAG 441


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 244/844 (28%), Positives = 427/844 (50%), Gaps = 80/844 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           ++R   + S L LG+  H R+L +    +  +   L+ MY++ G +  +RR+FD M  RD
Sbjct: 145 VIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRD 204

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           LISWN++++ Y+ +G        E     + +++     +  TL  ++ +C S+G   A 
Sbjct: 205 LISWNAMVSGYSVNG-----CFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAG 259

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           +++H +ALK G + DE ++ AL+++Y+ F  +  ++ +FD    +D+V +  M+ AY ++
Sbjct: 260 DSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQH 319

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--GKRHEEQVQAYAIKLLLYNNNS- 295
              +E F +F  +H +G+ P+  ++  VL   SDL  G  H E V    IKL L    S 
Sbjct: 320 SNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSV 379

Query: 296 ---------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      N +LWN  +SGYL   + + A++ F  M  + V
Sbjct: 380 VSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGV 439

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
             D+ T +  ++    T +L++ + IH   +++ F S   V N+L+ MY+  G +     
Sbjct: 440 APDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYT 499

Query: 384 ---------------------------------CGLRTDQ--FTLASV--LRASSSLPEG 406
                                            C +  ++  F L ++  L +S S+ E 
Sbjct: 500 LFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSED 559

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
             + + +H  AIK+  ++D  ++ ALI +Y   G +   + LF +    +  T+NA++ G
Sbjct: 560 AIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSG 619

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y  +N S K L LF+ M  + E+ + +T+   +  C   L   QGK +H+YA+++   L+
Sbjct: 620 YRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQL---QGKCIHSYAVRNFTRLE 676

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             + +  + MY +   +   ++IF+ + A + + W   +S CV   + D+ +  +  M  
Sbjct: 677 TPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLF 736

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
             V PDE T   L+ A S L   +    I A +++   S +  V  +L+D +++CG+I  
Sbjct: 737 LNVRPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISF 796

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  LF     +++V W AM+   + HGNGE  L LF  M   GV+PD +TF+ +LSACS+
Sbjct: 797 ARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSH 856

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            GLV +    F  ++  +GI P +EHY+ +VD LGR G   EA +++ SMPF  S ++  
Sbjct: 857 NGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLE 916

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
           +LLGACR  G+ + G+ V + L+  E   S +YV+LSNI+A+A +W D    R +M+ K 
Sbjct: 917 SLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEAKG 976

Query: 827 VKKD 830
           ++K+
Sbjct: 977 LRKN 980



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 183/717 (25%), Positives = 323/717 (45%), Gaps = 99/717 (13%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S ++S    I+    S  D + G S HA  L    I D  LT+ L++MY+    L  +R 
Sbjct: 237 SPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRL 296

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +FD  P +DL+S+NS+++AY         N  E F +FR +  +    + +TL  +L  C
Sbjct: 297 VFDLQPVKDLVSFNSMISAYMQH-----SNWKEAFEVFRLMHCAGVGPNLITLVSVLPSC 351

Query: 170 LSSGY-VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
               + +   E+VHG  +K+GL     V  ALV++YSK GK+  +  LF    E++ +LW
Sbjct: 352 SDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILW 411

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------EQVQ 282
             M+  Y  N         F  +  +G+ PD  +   V+ VIS  G R+       + + 
Sbjct: 412 NSMISGYLVNNEWNMALDAFCKMQIAGVAPDATT---VINVIS--GCRYTKDLHVAKSIH 466

Query: 283 AYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNH 314
           AYA++             L +Y +  ++               + WN  +SG+ ++GD+ 
Sbjct: 467 AYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSE 526

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            ++  F  M    V +D VT +  +++++ +++  +G+ +H   +KSG  S V + N+LI
Sbjct: 527 TSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALI 586

Query: 375 NMYSKMGCV----------CGLRTDQF--------------------------------- 391
            MY+  G V          C   T  +                                 
Sbjct: 587 TMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLV 646

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           TL ++L    S  +G    K IH +A++N T  ++ + T+ + +Y R  ++     +F  
Sbjct: 647 TLLNLLPVCQSQLQG----KCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSL 702

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               +L  WNA +   +    +   ++ F HM     R DE+T+   + AC  L      
Sbjct: 703 VSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFA 762

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
             + A  ++ GF +++ V + ++D + +CG++  A+ +F+     D V W  MI+    +
Sbjct: 763 ACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMH 822

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G  + AL ++  M  SGV PD+ TF  ++ A S    +EQGR +  +L + D    P + 
Sbjct: 823 GNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSL-QADHGITPRME 881

Query: 632 --ISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN---GEETLKLF 682
               +VD+  + G++++AY + + M    +  L  ++L     HGN   GE   KL 
Sbjct: 882 HYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLL 938



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 188/792 (23%), Positives = 340/792 (42%), Gaps = 90/792 (11%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF-DKMPDRDLI-SWN 123
           T  L   +  HAR+  +  I DRF+   L+  Y   G    A  LF +    R  + S N
Sbjct: 51  TCSLKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLN 110

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVH 182
            ++  ++  G        E   L+R L     F S   T  P+++ C ++  +     VH
Sbjct: 111 LVVRCFSDHGFHR-----ELLDLYRGL---CGFGSDNFTFPPVIRACTAASCLQLGRQVH 162

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
              L+ G   +  V  AL+++Y+K G+I  ++ +FD M  RD++ W  M+  Y+ NG   
Sbjct: 163 CRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFR 222

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIKLLLYNNNS------ 295
           E      ++ + G+ P+  ++  ++G+    G R   + + A+A+K    ++ S      
Sbjct: 223 EAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALI 282

Query: 296 ----------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                 ++V +N  +S Y+Q  +   A E F  M  + V  + +
Sbjct: 283 SMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLI 342

Query: 334 TFLVALAAVAG-TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------C- 382
           T +  L + +     +N G+ +HG  +K G    V V ++L++MYSK+G         C 
Sbjct: 343 TLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCC 402

Query: 383 ---------------------------------VCGLRTDQFTLASVLRASSSLPEGLHL 409
                                            + G+  D  T+ +V+ +     + LH+
Sbjct: 403 FTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVI-SGCRYTKDLHV 461

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K IH +A++N   +   V  AL+ +Y   G ++ +  LF+  +   L +WN MI G+  
Sbjct: 462 AKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAE 521

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
             +S  +L LF  M       D +T+   + +         G+ +H+ A+KSG   D+ +
Sbjct: 522 IGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSL 581

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           ++ ++ MY  CG +   Q +FN   + + + +  ++SG   N   +  L ++ QM  +  
Sbjct: 582 TNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDE 641

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+  T   L+    C + L QG+ IH+  ++     +  +  S + MY++  NIE    
Sbjct: 642 KPNLVTLLNLLPV--CQSQL-QGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRT 698

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F  +  RN ++WNA L    Q    +  +  F+ M    V PD VT + ++SACS  G 
Sbjct: 699 IFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGN 758

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
              A     ++ +K G    +   + L+D   R G    A EL  S   E  +    A++
Sbjct: 759 ADFAACIMAVILQK-GFSMNILVLNALIDTHSRCGSISFARELFDS-SVEKDSVTWGAMI 816

Query: 770 GACRVQGDTETG 781
            A  + G+ E  
Sbjct: 817 NAYSMHGNGEAA 828


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/714 (32%), Positives = 353/714 (49%), Gaps = 91/714 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N +V+LWN+ +  Y   G   GAI+ + +M+   V+ +  T+   L A +G   +  G +
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------------------GL 386
           IH      G  S V V  +L++ Y+K G +                            GL
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 387 RTDQFTLASVLRASSSLP---------------EGLHLSKQIHVHAIKNDTVADSFVSTA 431
             D   L   ++     P               + L   K +H + ++        V T 
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y +   +  A  +F+     +  +W+AMI GY+ S+   +ALELF  M    + +D
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM-ILKDAMD 309

Query: 492 E--ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
              +T+ + ++AC  L  L +G+++H Y +K G  LD+ + + +L MY KCG + DA   
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+++   D V+++ ++SGCV NG   +ALSI+  M+LSG+ PD  T   ++ A S L AL
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           + G   H  LI    ++D  +  +L+DMY+KCG I  A  +F +MD  + V WNAM++G 
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG G E L LF D+ A G++PD +TFI +LS+CS++GLV E    F  M   + I P 
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +EH   +VD LGRAG   EA   I +MPFE    +  ALL ACR+  + E G+ V++K+ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
           +L P  +  +VLLSNI++AA +WDD    R   K   +KK P                  
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGD 669

Query: 833 ------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I  K+E L+  +K  GY  +  FV  DVEEEEKE+ L YHSEKLA A+G+++
Sbjct: 670 QSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILN 729

Query: 887 TPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
                 IL  K                           ANRFHH ++G C C D
Sbjct: 730 LKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGD 783



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 259/607 (42%), Gaps = 98/607 (16%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + +  +L   I +  L   K  H   L ++   D  + + L  +Y  C  +V ARRLFD+
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +P+  +I WN I+ AYA +G  +         L+ S+       ++ T   +LK C    
Sbjct: 69  IPNPSVILWNQIIRAYAWNGPFDG-----AIDLYHSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +H +A   GL  D FV  ALV+ Y+K G + EA+ LF  M  RDVV W  M+ 
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR----HEEQVQAYAIK-- 287
             +  G  ++   L + +   G+CP+  +   ++GV+  +G+     H + +  Y ++  
Sbjct: 184 GCSLYGLCDDAVQLIMQMQEEGICPNSST---IVGVLPTVGEAKALGHGKALHGYCVRRS 240

Query: 288 -------------------LLLYNNN-------SNVVLWNKKLSGYLQVGDNHGAIECFV 321
                               LLY           N V W+  + GY+       A+E F 
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFD 300

Query: 322 NMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            MI +  +    VT    L A A   +L+ G+++H   +K G    +++GN+L++MY+K 
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKC 360

Query: 381 --------------------------GCV-----------------CGLRTDQFTLASVL 397
                                     GCV                  G+  D  T+  VL
Sbjct: 361 GVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A S L   L      H + I      D+ +  ALID+Y + G ++ A  +F   D  D+
Sbjct: 421 PACSHLA-ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 479

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WNAMI GY +     +AL LF  +   G + D+IT    + +C    ++ +G+ +   
Sbjct: 480 VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR-LWFD 538

Query: 518 AMKSGF----ELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC---- 568
           AM   F     ++ C+   ++D+  + G + +A     ++P  PD   W+ ++S C    
Sbjct: 539 AMSRDFSIVPRMEHCIC--MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHK 596

Query: 569 -VDNGEE 574
            ++ GEE
Sbjct: 597 NIELGEE 603



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 8/412 (1%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S SL E    +K+IH H +KN + ADS V   L  +Y     +  A  LF+      +  
Sbjct: 21  SKSLTE----AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL 76

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN +I  Y  +     A++L+  M   G R ++ T    +KAC  LL ++ G ++H++A 
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             G E D+ V + ++D Y KCG +V+AQ +F+ +   D VAW  MI+GC   G  D A+ 
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQ 196

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           +  QM+  G+ P+  T   ++       AL  G+ +H   ++    +   VG  L+DMYA
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYA 256

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFI 698
           KC  +  A  +F  M +RN V W+AM+ G       +E L+LF+ M     ++P  VT  
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLG 316

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VL AC+    +S      H    K G   ++   + L+    + G   +A      M  
Sbjct: 317 SVLRACAKLTDLSRG-RKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNP 375

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           + S S   A++  C   G+      +  ++M L   D     +L  + A ++
Sbjct: 376 KDSVSF-SAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSH 425


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/849 (30%), Positives = 407/849 (47%), Gaps = 120/849 (14%)

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
           F+S  T   L+     S     +  +H  ++K G V + F+S  L+NIY + G +  A+ 
Sbjct: 96  FSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 155

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD M  R++V W  ++  Y +NG  +E    F D+ R+G  P+  +    L    + G 
Sbjct: 156 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 215

Query: 276 ----------------RHEEQVQAYAIKLLLYNNN----------------SNVVLWNKK 303
                           R+   V    + + +Y +                  N + WN  
Sbjct: 216 SGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSI 275

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQY-----DSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           +S Y + GD   A + F +M +  + +     D+ +    L      +    G+++H   
Sbjct: 276 ISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVL-----EEGRRKGREVHAHV 330

Query: 359 LKSGFY-SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
           +++G   + V +GN L+NMY+K G +     D  ++  ++                    
Sbjct: 331 IRTGLNDNKVAIGNGLVNMYAKSGAI----ADACSVFELM-------------------- 366

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS-HKA 476
           ++ D+V+      +LI    +N    +A  +F     +D  +WN++I     S  S  +A
Sbjct: 367 VEKDSVS----WNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQA 422

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           ++ F  M   G  L  +T    + A   L + +   Q+HA  +K     D  + + +L  
Sbjct: 423 VKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSC 482

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           Y KCG M + + IF  +    D+V+W +MISG + N     A+ +   M   G   D FT
Sbjct: 483 YGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFT 542

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           FA ++ A + +  LE+G ++HA  I+    SD  VG +LVDMY+KCG I+ A   F+ M 
Sbjct: 543 FATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 602

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
           +RN   WN+M+ G A+HG+GE+ LKLF  M   G  PD VTF+GVLSACS+ G V E +E
Sbjct: 603 LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE 662

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA-CRV 774
           +F  M E Y + P VEH+S +VD LGRAG+  E G+ I SMP + +  + R +LGA CR 
Sbjct: 663 HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRA 722

Query: 775 QG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA- 832
            G +TE G+  AE L+ LEP ++  YVLL+N++A+  +W+DV  AR  MK   VKK+   
Sbjct: 723 NGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGC 782

Query: 833 ----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                 DLI+ K+  L +++++ GY+P T + L D+E E KE  
Sbjct: 783 SWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEEL 842

Query: 871 LYYHSEKLARAYGLI--STPPSSV-------------------ILSNKEPLY-ANRFHHL 908
           L YHSEK+A A+ L   S  P  +                   I+  +  L  +NRFHH 
Sbjct: 843 LSYHSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHF 902

Query: 909 RDGMCPCAD 917
            DG C C D
Sbjct: 903 EDGKCSCGD 911



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/612 (22%), Positives = 246/612 (40%), Gaps = 125/612 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            +  H + +    + + FL+N L+ +Y R G L  A++LFD+M +R+L++W  +++ Y  
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS--ETVHGYALKIG 189
           +G+ +     E    FR +  +    +       L+ C  SG         +HG   K  
Sbjct: 178 NGKPD-----EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTR 232

Query: 190 LVWDEFVSGALVNIY-SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
              D  V   L+++Y S      +A+ +FDG+  R+ + W  ++  Y+  G     + LF
Sbjct: 233 YGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLF 292

Query: 249 VDLHRSGLC----PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV------- 297
             + + GL     P+D   +    V+ + G+R   +V A+ I+  L +N   +       
Sbjct: 293 SSMQKEGLGFSFKPNDAFSE--FSVLEE-GRRKGREVHAHVIRTGLNDNKVAIGNGLVNM 349

Query: 298 ----------------------VLWNKKLSG-------------------YLQVGDN--- 313
                                 V WN  +SG                   Y QV  N   
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409

Query: 314 ----------HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
                       A++ F+ M+R       VTF+  L+AV+      +  QIH   LK   
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469

Query: 364 YSAVIVGNSLINMYSKMGCV--C------------------------------------- 384
                +GN+L++ Y K G +  C                                     
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529

Query: 385 -----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                G R D FT A++L A +S+   L    ++H   I+    +D  V +AL+D+Y + 
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVAT-LERGMEVHACGIRACLESDVVVGSALVDMYSKC 588

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G +  A   FE     ++ +WN+MI GY    +  KAL+LF+ M   G+  D +T    +
Sbjct: 589 GRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVL 648

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-AP 556
            AC  +  +++G + H  +M   + L   V   S ++D+  + G + +     N +P  P
Sbjct: 649 SACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKP 707

Query: 557 DDVAWTTMISGC 568
           + + W T++  C
Sbjct: 708 NVLIWRTVLGAC 719



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 6/243 (2%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           S S ++  FLQ        S   + +IL    S S   +    HA +L      D  + N
Sbjct: 418 SVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 477

Query: 93  NLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
            L++ Y +CG +    ++F +M + RD +SWNS+++ Y H+     E + +   L   + 
Sbjct: 478 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN-----ELLHKAMDLVWFMM 532

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           +        T A +L  C S   +     VH   ++  L  D  V  ALV++YSK G+I 
Sbjct: 533 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 592

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A   F+ M  R+V  W  M+  YA +G GE+   LF  +   G  PD  +   VL   S
Sbjct: 593 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 652

Query: 272 DLG 274
            +G
Sbjct: 653 HVG 655


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/714 (32%), Positives = 352/714 (49%), Gaps = 91/714 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N +V+LWN+ +  Y   G   GAI+ + +M+   V+ +  T+   L A +G   +  G +
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------------------GL 386
           IH      G  S V V  +L++ Y+K G +                            GL
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 387 RTDQFTLASVLRASSSLP---------------EGLHLSKQIHVHAIKNDTVADSFVSTA 431
             D   L   ++     P               + L   K +H + ++        V T 
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y +   +  A  +F+     +  +W+AMI GY+ S+   +ALELF  M    + +D
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM-ILKDAMD 309

Query: 492 E--ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
              +T+ + ++AC  L  L +G+++H Y +K G  LD+ + + +L MY KCG + DA   
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+ +   D V+++ ++SGCV NG   +ALSI+  M+LSG+ PD  T   ++ A S L AL
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           + G   H  LI    ++D  +  +L+DMY+KCG I  A  +F +MD  + V WNAM++G 
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG G E L LF D+ A G++PD +TFI +LS+CS++GLV E    F  M   + I P 
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +EH   +VD LGRAG   EA   I +MPFE    +  ALL ACR+  + E G+ V++K+ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------- 832
           +L P  +  +VLLSNI++AA +WDD    R   K   +KK P                  
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGD 669

Query: 833 ------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                   I  K+E L+  +K  GY  +  FV  DVEEEEKE+ L YHSEKLA A+G+++
Sbjct: 670 QSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILN 729

Query: 887 TPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
                 IL  K                           ANRFHH ++G C C D
Sbjct: 730 LKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGD 783



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 259/607 (42%), Gaps = 98/607 (16%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + +  +L   I +  L   K  H   L ++   D  + + L  +Y  C  +V ARRLFD+
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +P+  +I WN I+ AYA +G  +         L+ S+       ++ T   +LK C    
Sbjct: 69  IPNPSVILWNQIIRAYAWNGPFDG-----AIDLYHSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +H +A   GL  D FV  ALV+ Y+K G + EA+ LF  M  RDVV W  M+ 
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR----HEEQVQAYAIK-- 287
             +  G  ++   L + +   G+CP+  +   ++GV+  +G+     H + +  Y ++  
Sbjct: 184 GCSLYGLCDDAVQLIMQMQEEGICPNSST---IVGVLPTVGEAKALGHGKALHGYCVRRS 240

Query: 288 -------------------LLLYNNN-------SNVVLWNKKLSGYLQVGDNHGAIECFV 321
                               LLY           N V W+  + GY+       A+E F 
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFD 300

Query: 322 NMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            MI +  +    VT    L A A   +L+ G+++H   +K G    +++GN+L++MY+K 
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKC 360

Query: 381 --------------------------GCV-----------------CGLRTDQFTLASVL 397
                                     GCV                  G+  D  T+  VL
Sbjct: 361 GVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A S L   L      H + I      D+ +  ALID+Y + G ++ A  +F   D  D+
Sbjct: 421 PACSHLA-ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 479

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WNAMI GY +     +AL LF  +   G + D+IT    + +C    ++ +G+ +   
Sbjct: 480 VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR-LWFD 538

Query: 518 AMKSGF----ELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC---- 568
           AM   F     ++ C+   ++D+  + G + +A     ++P  PD   W+ ++S C    
Sbjct: 539 AMSRDFSIVPRMEHCIC--MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHK 596

Query: 569 -VDNGEE 574
            ++ GEE
Sbjct: 597 NIELGEE 603



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 8/412 (1%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S SL E    +K+IH H +KN + ADS V   L  +Y     +  A  LF+      +  
Sbjct: 21  SKSLTE----AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL 76

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN +I  Y  +     A++L+  M   G R ++ T    +KAC  LL ++ G ++H++A 
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             G E D+ V + ++D Y KCG +V+AQ +F+ +   D VAW  MI+GC   G  D A+ 
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQ 196

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           +  QM+  G+ P+  T   ++       AL  G+ +H   ++    +   VG  L+DMYA
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYA 256

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFI 698
           KC  +  A  +F  M +RN V W+AM+ G       +E L+LF+ M     ++P  VT  
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLG 316

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VL AC+    +S      H    K G   ++   + L+    + G   +A      M  
Sbjct: 317 SVLRACAKLTDLSRG-RKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNP 375

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           + S S   A++  C   G+      +  ++M L   D     +L  + A ++
Sbjct: 376 KDSVSF-SAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSH 425


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 246/773 (31%), Positives = 391/773 (50%), Gaps = 80/773 (10%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE-NGFGEEVFHLFVDL 251
           + F    +++ Y K G +  A+ +FD   ER VV W  M+ AY++ N FG+  F LF ++
Sbjct: 73  NSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGD-AFKLFAEM 131

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
           HRSG  PD  +   +L   +DL +  +E  QA+A +++   ++ N  + N  L  Y + G
Sbjct: 132 HRSGSQPDYVTYITLLTGCNDL-EVAKELYQAHA-QIVKLGHHLNHRVCNTLLDSYFKTG 189

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A   F+ M      +DSV+F V    + G  N  L ++                  
Sbjct: 190 GLDSARRLFLEM----CGWDSVSFNVM---ITGYANNGLNEEA----------------- 225

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
             I ++ +M  + G +   FT A+V+ AS  L +     +QIH   +K   + + FV  A
Sbjct: 226 --IELFVEMQNL-GFKPSDFTFAAVISASVGL-DDTAFGQQIHGFVVKTSFIRNVFVGNA 281

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
            +D Y ++  + E   LF      D  ++N +I  Y       ++++LF  +  +     
Sbjct: 282 FLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRK 341

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
                T +      L L+ G+Q+HA  + S  + D  VS+ ++DMY KCG   +A  IF 
Sbjct: 342 NFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFL 401

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            + +   V WT MIS  V  G  +  L ++++MR + V  D+ TFA ++KAS+ L ++  
Sbjct: 402 RLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILL 461

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+Q+H+ +I+     + + G +L+DMYA C +I+DA   F++M  RN V WNA+L   AQ
Sbjct: 462 GKQLHSCVIR-SGFMNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQ 520

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +G+G+ TLK FE+M   G +PDSV+F+ +L+ACS+  LV E  + F+ M   Y + P+ E
Sbjct: 521 NGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKRE 580

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VDAL R+GR  EA +L+  MPFE    +  ++L +CR+  +    +  A +L  +
Sbjct: 581 HYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNM 640

Query: 792 EPF-DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADL---------------- 834
           +   D++ YV +SNIFA A QWD V   +  M+ + V+K PA                  
Sbjct: 641 KVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDD 700

Query: 835 -------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                  I  K+E L +++++ GY PD      +V++E K  +L YHSE+LA A+ LI+T
Sbjct: 701 KHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINT 760

Query: 888 PPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           P  S IL  K                           +NRFHH RDG C C D
Sbjct: 761 PEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGD 813



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 241/574 (41%), Gaps = 86/574 (14%)

Query: 72  GKSTHARILNSSQIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           G+   AR L   Q+P+R  F  + +++ Y + G+L  ARR+FD   +R +++W +++ AY
Sbjct: 57  GQLCQARQL-LDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAY 115

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           + S         + F+LF  +  S +    +T   LL  C            H   +K+G
Sbjct: 116 SKSNR-----FGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLG 170

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              +  V   L++ Y K G +  A+ LF  M   D V + VM+  YA NG  EE   LFV
Sbjct: 171 HHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFV 230

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIK-------------LLLYNNNS 295
           ++   G  P D +   V+     L      +Q+  + +K             L  Y+ + 
Sbjct: 231 EMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHD 290

Query: 296 NV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
            V               V +N  ++ Y  VG    +I+ F  +  +     +  F   L+
Sbjct: 291 CVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLS 350

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------- 383
             A + +L +G+Q+H   + S       V NSL++MY+K G                   
Sbjct: 351 IAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP 410

Query: 384 --------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                                       +  DQ T A VL+AS++L   L L KQ+H   
Sbjct: 411 WTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASIL-LGKQLHSCV 469

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           I++  + + +   AL+D+Y    S+ +A   FE     ++ TWNA++  Y  + +    L
Sbjct: 470 IRSGFM-NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTL 528

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILD 535
           + F  M  SG + D ++    + AC    ++++G + +   M   + L       + ++D
Sbjct: 529 KSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLK-YFNDMSGVYNLAPKREHYTAMVD 587

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              + G   +A+ +   +P  PD++ WT++++ C
Sbjct: 588 ALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSC 621



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 146/331 (44%), Gaps = 33/331 (9%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F++  +     S   + +++  ++   D   G+  H  ++ +S I + F+ N  +  YS+
Sbjct: 229 FVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSK 288

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
              +   R+LF++MP+ D +S+N I+ AYA  G+     V E   LF+ L+ +       
Sbjct: 289 HDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGK-----VKESIDLFQELQFTTFDRKNF 343

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
               +L +  SS  +     +H   +      D  VS +LV++Y+K GK  EA  +F  +
Sbjct: 344 PFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRL 403

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGK 275
             R  V W  M+ A  + G  E    LF ++ R+ +  D  +  CVL   ++     LGK
Sbjct: 404 SSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGK 463

Query: 276 RHEEQV------QAY-----------------AIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           +    V        Y                 AIK     +  NVV WN  LS Y Q GD
Sbjct: 464 QLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGD 523

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             G ++ F  MI S  Q DSV+FL  L A +
Sbjct: 524 GKGTLKSFEEMIMSGYQPDSVSFLCILTACS 554


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 242/823 (29%), Positives = 388/823 (47%), Gaps = 134/823 (16%)

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   + + S  LV  + + G +  A+ LFD M  +++     M+  Y ++G   E  
Sbjct: 93  IKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEAR 152

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LF  + +                                            V W   + 
Sbjct: 153 TLFDSMFQR-----------------------------------------TAVTWTMLIG 171

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY Q      A   F+ M R  +  D V+    L+     D++N  +Q+H   +K G+ S
Sbjct: 172 GYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDS 231

Query: 366 AVIVGNSL--------------------------------------------INMYSKMG 381
            ++V NSL                                            IN++ KM 
Sbjct: 232 TLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQ 291

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
            V G R  +FT A++L A   L + +   +Q+H   +K + V + FV+ AL+D Y ++  
Sbjct: 292 EV-GYRPTEFTFAAILTAGIQL-DDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDR 349

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           + EA  LF      D  ++N ++  Y  +    ++LELF  +  +G        AT +  
Sbjct: 350 VVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSI 409

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
               L L  G+Q+H+  + +    ++ V + ++DMY KCG   +A  IF+D+     V W
Sbjct: 410 AAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPW 469

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T MIS  V  G  +  L ++ +M+ + +  D  T+A +V+A + L +L  G+Q+H+++I 
Sbjct: 470 TAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIG 529

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               S+ F G +LVDMYAKCG+I+DA  +F++M +RN+V WNA++   AQ+G+G+ TL+L
Sbjct: 530 SGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRL 589

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE+M   G++PDSV+ + +L ACS+ GLV E  + F  M   Y + P+ EHY+  +D L 
Sbjct: 590 FEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLC 649

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF-DSSAYV 800
           R GR  EA +L+  MPFE    M  ++L +C +  + E  K  A +L  ++   D++ YV
Sbjct: 650 RGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYV 709

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFA 837
            +SNI+AAA +WD+V   +  M+ + VKK PA                         I  
Sbjct: 710 TMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMK 769

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK 897
           K++ L +++ + GY PD+   L +V+EE K  +L YHSE++A A+ LISTP  S IL  K
Sbjct: 770 KLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMK 829

Query: 898 EPLY-----------------------ANRFHHLRDGMCPCAD 917
                                      ++RFHH RDG C C D
Sbjct: 830 NLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRD 872



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/614 (23%), Positives = 269/614 (43%), Gaps = 113/614 (18%)

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           A I+ +   P+ + +N L+  + + G L  AR+LFD+MP +++ S N+++  Y  SG   
Sbjct: 90  ASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG--- 146

Query: 137 AENVTEGFRLFRSL--RESITFT-----------------------------SRLTLAPL 165
             N++E   LF S+  R ++T+T                               ++LA L
Sbjct: 147 --NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATL 204

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L        V     VH + +K+G      VS +L++ Y K   +  A  LF+ + ERD 
Sbjct: 205 LSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDS 264

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAY 284
           V +  +L  Y++ GF  E  +LF  +   G  P + +   +L     L      +QV  +
Sbjct: 265 VTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGF 324

Query: 285 AIK-------------LLLYNNNSNVV---------------LWNKKLSGYLQVGDNHGA 316
            +K             L  Y+ +  VV                +N  ++ Y   G    +
Sbjct: 325 VVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKES 384

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           +E F  +  +     +  F   L+  A + NL++G+QIH  T+ +   S ++VGNSL++M
Sbjct: 385 LELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDM 444

Query: 377 YSKMGCVC--------------------------------GLR-----------TDQFTL 393
           Y+K G                                   GL+            D  T 
Sbjct: 445 YAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATY 504

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS++RA +SL   L L KQ+H H I +  +++ F  +AL+D+Y + GS+ +A  +F+   
Sbjct: 505 ASIVRACASLA-SLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP 563

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             +  +WNA+I  Y  + +    L LF  M  SG + D +++ + + AC    ++++G Q
Sbjct: 564 VRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQ 623

Query: 514 MHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
            +  +M   ++L       +  +DM  + G   +A+ +   +P  PD++ W+++++ C  
Sbjct: 624 -YFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGI 682

Query: 571 NGEEDLALSIYHQM 584
           +  ++LA    +Q+
Sbjct: 683 HKNQELAKKAANQL 696



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 123/240 (51%), Gaps = 7/240 (2%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           SL L   LQ + F   +    + ++L  A  + +L +G+  H++ + +  I +  + N+L
Sbjct: 384 SLELFKELQFTGFDRRNFP--FATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSL 441

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY++CG    A R+F  +  +  + W +++++Y   G        +G +LF  ++ + 
Sbjct: 442 VDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHE-----DGLKLFVEMQRAK 496

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T A +++ C S   +   + +H + +  G + + F   ALV++Y+K G I++A 
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +F  M  R+ V W  ++ AYA+NG G+    LF ++ RSGL PD  S+  +L   S  G
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 34/315 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +IL   I   D+  G+  H  ++  + + + F+ N L+  YS+   +V A +LF +MP+ 
Sbjct: 304 AILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEV 363

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D IS+N ++  YA +G      V E   LF+ L+ +         A LL +   S  +  
Sbjct: 364 DGISYNVLVTCYAWNGR-----VKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDI 418

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +    + +  V  +LV++Y+K G+  EA  +F  +  +  V W  M+ +Y +
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQV--QAY------ 284
            G  E+   LFV++ R+ +  D  +   ++   +      LGK+    +    Y      
Sbjct: 479 KGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFS 538

Query: 285 ----------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                           A+++       N V WN  +S Y Q GD    +  F  M+RS +
Sbjct: 539 GSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGL 598

Query: 329 QYDSVTFLVALAAVA 343
           Q DSV+ L  L A +
Sbjct: 599 QPDSVSLLSILCACS 613



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 5/126 (3%)

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + LTA +    + A++IK   + + +    LV  + + G++  A  LF +M  +N    N
Sbjct: 77  TTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTN 136

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            M++G  + GN  E   LF+ M     +  +VT+  ++   +      EA+  F  M  +
Sbjct: 137 TMIMGYIKSGNLSEARTLFDSM----FQRTAVTWTMLIGGYAQNNQFREAFGLFIEM-GR 191

Query: 724 YGIEPE 729
           +GI+P+
Sbjct: 192 HGIDPD 197


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/713 (32%), Positives = 365/713 (51%), Gaps = 91/713 (12%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECF-VNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           +N +V  WN  +SGY + G +   I CF + M+ S +Q D  TF   L A     N+  G
Sbjct: 113 HNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR---NVTDG 169

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------------------------CVC 384
            +IH   LK GF   V V  SLI++Y + G                           C  
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQS 229

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSK-----------QIHVHAIKNDTVADSFVSTALI 433
           G   +  TL+  LRA  S+     LS             IH ++IK+   ++ FVS  LI
Sbjct: 230 GNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D+Y   GS+ + + +F+     DL +WN++I  Y L+    +A+ LF  M  S  + D +
Sbjct: 290 DLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCL 349

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFND 552
           T+ +       L  ++  + +  + ++ G+ L D+ + + ++ MY K G +  A+++FN 
Sbjct: 350 TLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG--VVPDEFTFAILVKASSCLTALE 610
           +P  D ++W T+ISG   NG    A+ +Y+ M   G  +  ++ T+  ++ A S   AL 
Sbjct: 410 LPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALR 469

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QG ++H  L+K     D FVG SL DMY KCG ++DA  LF Q+   N+V WN ++    
Sbjct: 470 QGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHG 529

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG+GE+ + LF++M   GV+PD +TF+ +LSACS++GLV E    F +M+  YGI P +
Sbjct: 530 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSL 589

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           +HY  +VD  GRAG+ + A   I SMP +  AS+  ALL ACRV G+ + GK  +E L  
Sbjct: 590 KHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 649

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           +EP     +VLLSN++A+A +W+ V   R     K ++K P                   
Sbjct: 650 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQ 709

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                + ++ ++  L +++K  GYVPD  FVL DVE++EKE  L  HSE+LA A+ LI+T
Sbjct: 710 THPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITT 769

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P  + I                     ++ +E +   +NRFHH ++G+C C D
Sbjct: 770 PAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGD 822



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 243/588 (41%), Gaps = 89/588 (15%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           ++L   K  HAR++ S+ I +  ++  L+ +Y   G++  AR  FD + +RD+ +WN ++
Sbjct: 65  TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           + Y  +G   +  V   F LF  L   +    R T   +LK C +   V     +H  AL
Sbjct: 125 SGYGRAGY--SSEVIRCFSLFM-LSSGLQPDYR-TFPSVLKACRN---VTDGNKIHCLAL 177

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K G +WD +V+ +L+++Y ++G +  A+ LFD M  RD+  W  M+  Y ++G  +E   
Sbjct: 178 KFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALT 237

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKL-----LLYNNN------ 294
           L   L       D  +V  +L   ++ G  +    + +Y+IK      L  +N       
Sbjct: 238 LSDGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293

Query: 295 -----------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                             +++ WN  +  Y        AI  F  M  S +Q D +T + 
Sbjct: 294 EFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLIS 353

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMGCVCGLR--------- 387
             + ++    +   + + G TL+ G F   + +GN+++ MY+K+G V   R         
Sbjct: 354 LASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNK 413

Query: 388 ------------------------------------TDQFTLASVLRASSSLPEGLHLSK 411
                                                +Q T  SVL A S     L    
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQ-AGALRQGM 472

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H   +KN    D FV T+L D+Y + G + +A  LF      +   WN +I  +    
Sbjct: 473 KLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHG 532

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVS 530
           +  KA+ LF  M   G + D IT  T + AC    ++ +G+          G    L   
Sbjct: 533 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHY 592

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             ++D+Y + G +  A +    +P  PD   W  ++S C  +G  DL 
Sbjct: 593 GCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLG 640



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 67/440 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   + +D   G   H   L    + D ++  +L+ +Y R G++V AR LFD+MP R
Sbjct: 158 SVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTR 214

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ SWN++++ Y  SG     N  E   L   LR        +T+  LL  C  +G    
Sbjct: 215 DMGSWNAMISGYCQSG-----NAKEALTLSDGLRA----MDSVTVVSLLSACTEAGDFNR 265

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
             T+H Y++K GL  + FVS  L+++Y++FG +++ + +FD M  RD++ W  +++AY  
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYEL 325

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK--------- 287
           N        LF ++  S + PD  ++  +  ++S LG+ R    VQ + ++         
Sbjct: 326 NEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDIT 385

Query: 288 -----LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-- 325
                +++Y                 N +V+ WN  +SGY Q G    AIE +  M    
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
             +  +  T++  L A +    L  G ++HG  LK+G Y  V VG SL +MY K    CG
Sbjct: 446 GEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGK----CG 501

Query: 386 LRTDQFTLASVLRASSSLP-------EGLH--------LSKQIHVHAIKNDTVADSFVST 430
              D  +L   +   +S+P        G H        L K++    +K D +  +FV+ 
Sbjct: 502 RLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI--TFVT- 558

Query: 431 ALIDVYCRNGSMAEAEYLFE 450
            L+     +G + E E+ FE
Sbjct: 559 -LLSACSHSGLVDEGEWCFE 577



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 162/303 (53%), Gaps = 8/303 (2%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L  +K +H   + ++ + +  +S  L+++YC  G++A A Y F++    D+  WN MI G
Sbjct: 67  LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126

Query: 467 YILSNNSHKALELFS-HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           Y  +  S + +  FS  M +SG + D  T  + +KAC     +  G ++H  A+K GF  
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMW 183

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D+ V++ ++ +Y + GA+V+A+ +F+++P  D  +W  MISG   +G    AL++   +R
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR 243

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
                 D  T   L+ A +      +G  IH+  IK    S+ FV   L+D+YA+ G+++
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           D   +F +M +R+ + WN+++     +      + LF++M+   ++PD +T I + S  S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359

Query: 706 YTG 708
             G
Sbjct: 360 QLG 362



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 124/250 (49%), Gaps = 9/250 (3%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L+  K +HA  + S    ++C+S+ ++++Y   G +  A+  F+ I   D  AW  MISG
Sbjct: 67  LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126

Query: 568 CVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
               G     +  +    LS G+ PD  TF  ++KA   +T    G +IH   +K     
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGFMW 183

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D +V  SL+ +Y + G + +A ILF +M  R+   WNAM+ G  Q GN +E L L + ++
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR 243

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
           A     DSVT + +LSAC+  G  +      H    K+G+E E+   + L+D     G  
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGV-TIHSYSIKHGLESELFVSNKLIDLYAEFGSL 298

Query: 747 KEAGELILSM 756
           K+  ++   M
Sbjct: 299 KDCQKVFDRM 308



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 13/195 (6%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S++   W S+L        L  G   H R+L +    D F+  +L  MY +CG L  A  
Sbjct: 449 SANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALS 508

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           LF ++P  + + WN+++A +   G G      +   LF+ + +       +T   LL  C
Sbjct: 509 LFYQIPRVNSVPWNTLIACHGFHGHGE-----KAVMLFKEMLDEGVKPDHITFVTLLSAC 563

Query: 170 LSSGYV----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERD 224
             SG V    W  E +       G+       G +V++Y + G++  A      M  + D
Sbjct: 564 SHSGLVDEGEWCFEMMQ---TDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD 620

Query: 225 VVLWKVMLRAYAENG 239
             +W  +L A   +G
Sbjct: 621 ASIWGALLSACRVHG 635



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 6/187 (3%)

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           T L+  + +HA L+  +   +  +   LV++Y   GN+  A   F  +  R+   WN M+
Sbjct: 65  TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124

Query: 667 VGLAQHGNGEETLKLFE-DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
            G  + G   E ++ F   M + G++PD  TF  VL AC     V++     H +  K+G
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDG-NKIHCLALKFG 180

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
              +V   + L+    R G    A  L   MP     S +  + G C+  G+ +    ++
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ-SGNAKEALTLS 239

Query: 786 EKLMALE 792
           + L A++
Sbjct: 240 DGLRAMD 246


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/709 (31%), Positives = 363/709 (51%), Gaps = 91/709 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           VL+   L G+ +V D   A++ FV M    V+     F   L        L +G++IHG 
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 358 TLKSGFYSAVIVGNSLINMYSK-------------------------------------- 379
            +KSGF   +     L NMY+K                                      
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 380 -----MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                + C   L+    T+ SVL A S+L   + + K+IH +A++    +   ++TAL+D
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSAL-RLIRIGKEIHGYAMRAGFDSLVNIATALVD 279

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+  A  LF+     ++ +WN+MI  Y+ + N  +A+ +F  M   G +  +++
Sbjct: 280 MYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS 339

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +  A+ AC  L  L++G+ +H  +++   + ++ V + ++ MY KC  +  A S+F  + 
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           +   V+W  MI G   NG    AL+ + QM+   V PD FT+  ++ A + L+     + 
Sbjct: 400 SRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH  +++     + FV  +LVDMYAKCG I  A ++F  M  R+   WNAM+ G   HG 
Sbjct: 460 IHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGI 519

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G+  L+LFE+M+   + P+ VTF+ V+SACS++GLV    + FH+M+E Y IEP ++HY 
Sbjct: 520 GKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYG 579

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD LGRAGR  EA + I+ MP + + +++ A+LGAC++  +    + VAE+L  L P 
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPE 639

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------------- 831
           D   +VLL+NI+ AA+ W+ V   R  M R+ ++K P                       
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPS 699

Query: 832 ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
           +  I+A +E LI +IKE GYVPDT+ + L +E++ KE+ L  HSEKLA ++GL++T   +
Sbjct: 700 SKKIYAFLEKLICQIKEAGYVPDTNLI-LGLEDDVKEQLLSSHSEKLAISFGLLNTTAGT 758

Query: 892 VI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            I                     ++ +E +  +  RFHH ++G C C D
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGD 807



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 166/320 (51%), Gaps = 14/320 (4%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           A +L   SSL E  H+   I     KN    +    T L+ ++CR GS+ EA  +FE  D
Sbjct: 41  ALLLERCSSLKELRHILPLI----FKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPID 96

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI-----TIATAVKACGCLLML 508
                 +  M+ G+   ++  KAL+ F  M     R DE+          +K CG    L
Sbjct: 97  KKLNVLYYTMLKGFAKVSDLDKALKFFVRM-----RDDEVEPVVYNFTYLLKVCGDEAEL 151

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + GK++H   +KSGF LDL   +G+ +MY KC  + +A+ +F+ +P  D V+W T+++G 
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGY 211

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG   +AL + + M    + P   T   ++ A S L  +  G++IH   ++    S  
Sbjct: 212 SQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLV 271

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            +  +LVDMYAKCG+++ A +LF  M  RN V WN+M+    Q+ N +E + +F+ M   
Sbjct: 272 NIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDE 331

Query: 689 GVEPDSVTFIGVLSACSYTG 708
           GV+P  V+ +G L AC+  G
Sbjct: 332 GVKPTDVSVMGALHACADLG 351



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 166/347 (47%), Gaps = 36/347 (10%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           ++L +GK  H  ++ S    D F    L  MY++C  +  AR++FD+MP+RDL+SWN+I+
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIV 208

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRES-ITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           A Y+ +G               +L+ S IT  S L     L+L      +   + +HGYA
Sbjct: 209 AGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRL------IRIGKEIHGYA 262

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           ++ G      ++ ALV++Y+K G ++ A+ LFDGM ER+VV W  M+ AY +N   +E  
Sbjct: 263 MRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLLYNNNS--------- 295
            +F  +   G+ P D SV   L   +DLG     + +   +++L L  N S         
Sbjct: 323 VIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMY 382

Query: 296 -------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                               +V WN  + G+ Q G    A+  F  M    V+ D+ T++
Sbjct: 383 CKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYV 442

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             + A+A     +  + IHG  +++     V V  +L++MY+K G +
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAI 489



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 152/650 (23%), Positives = 259/650 (39%), Gaps = 103/650 (15%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T   +P  S S   FL + ++  ++      ++L    S+   L  +     I  +    
Sbjct: 10  TVSQIPPISSSHRHFLSQRNYIPANVYEHPAALLLERCSSLKEL--RHILPLIFKNGLYQ 67

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           +      L++++ R GS+  A R+F+ +  +  + + ++L  +A        ++ +  + 
Sbjct: 68  EHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFA-----KVSDLDKALKF 122

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +R+            LLK+C     +   + +HG  +K G   D F    L N+Y+K
Sbjct: 123 FVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK 182

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
             ++ EA+ +FD M ERD+V W  ++  Y++NG       +   +    L P   ++  V
Sbjct: 183 CRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSV 242

Query: 267 LGVISDLG-KRHEEQVQAYAIKL--------------------------LLYNN--NSNV 297
           L  +S L   R  +++  YA++                           LL++     NV
Sbjct: 243 LPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNV 302

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  +  Y+Q  +   A+  F  M+   V+   V+ + AL A A   +L  G+ IH  
Sbjct: 303 VSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362

Query: 358 TLKSGFYSAVIVGNSLINMYSKM----------------------GCVCG---------- 385
           +++      V V NSLI+MY K                         + G          
Sbjct: 363 SVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEA 422

Query: 386 -----------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                      ++ D FT  SV+ A + L    H +K IH   ++N    + FV+TAL+D
Sbjct: 423 LNYFSQMQARTVKPDTFTYVSVITAIAEL-SITHHAKWIHGVVMRNCLDKNVFVTTALVD 481

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G++  A  +F+      + TWNAMI GY        ALELF  M     R + +T
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVT 541

Query: 495 IATAVKACG----------CLLMLKQGKQMHAYAMKSGFELDLCVSSG--------ILDM 536
             + + AC           C  M+K+   +       G  +DL   +G        I+ M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601

Query: 537 YVKC-----GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
            VK      GAM+ A  I  ++   + VA         D G   L  +IY
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIY 651



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 38/356 (10%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           LK+ + +     K+G   +    + ++ ++ + G++ +A  +F  I    +V + TM+ G
Sbjct: 50  LKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKG 109

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
                + D AL  + +MR   V P  + F  L+K       L  G++IH  L+K   S D
Sbjct: 110 FAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            F    L +MYAKC  + +A  +F +M  R+ V WN ++ G +Q+G     L++   M  
Sbjct: 170 LFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCE 229

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             ++P  +T + VL A S   L+    E  H    + G +  V   + LVD   + G  K
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLIRIGKE-IHGYAMRAGFDSLVNIATALVDMYAKCGSLK 288

Query: 748 EAGELILSM--------------------PFEASASMHRAL--------------LGACR 773
            A  L   M                    P EA     + L              L AC 
Sbjct: 289 TARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACA 348

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVL--LSNIFAAANQWDDVTSARGEMKRKNV 827
             GD E G+++ +  + LE  D +  V+  L +++    + D   S  G+++ + +
Sbjct: 349 DLGDLERGRFIHKLSVELE-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 238/750 (31%), Positives = 359/750 (47%), Gaps = 80/750 (10%)

Query: 161 TLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           +LA LL  CL+   +       H  A+  GL+ D F++  L+  YSK G++ +A+ LFD 
Sbjct: 31  SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDS 90

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-PDDES------VQCVLGVISD 272
           M  R++V W   +  YA++G  ++   LF     +G   PD E          +      
Sbjct: 91  MPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQS 150

Query: 273 LGKRHEEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKL 304
              R  EQV   A KL L  N                              N V W   +
Sbjct: 151 RAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVI 210

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +GY Q G    A+E F  M    V+ D      A +A +G   +  G+QIHG   ++   
Sbjct: 211 TGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAE 270

Query: 365 SAVIVGNSLINMYSKMGCV----------------------------------------- 383
           S   V N+LI++Y K   +                                         
Sbjct: 271 SDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQL 330

Query: 384 --CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
              G + D F   S+L +  SL   +   +Q+H H IK D  +D +V  ALID+Y +   
Sbjct: 331 SQAGWQPDVFACTSILNSCGSL-AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEH 389

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           + EA  +FE     D  ++NAMI GY    +   A+E+F  M     +   +T  + +  
Sbjct: 390 LTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGV 449

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
                 L+  KQ+H   +KSG  LDL   S ++D+Y K   + DA+ +F+ +   D V W
Sbjct: 450 SSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIW 509

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             MI G   N   + A+ ++ ++R+SG+ P+EFTF  LV  +S L ++  G+Q HA +IK
Sbjct: 510 NAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIK 569

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               SDP +  +L+DMYAKCG IE+  +LF+    ++ + WN+M+   AQHG+ EE L +
Sbjct: 570 AGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHV 629

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M+  GVEP+ VTF+ VLSAC++ GLV E   +F+ M+ KY +EP  EHY+ +V+  G
Sbjct: 630 FGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFG 689

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           R+G+   A E I  MP E  A++ R+LL AC + G+ E G++  E  +  +P DS   VL
Sbjct: 690 RSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVL 749

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           +SNI+A+   W D    R  M    V K+P
Sbjct: 750 MSNIYASKGLWADAQKLRQGMDCAGVVKEP 779



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 5/219 (2%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S+L  + S SDL L K  H  I+ S    D +  + L+ +YS+   +  A+ +F  M 
Sbjct: 443 FVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQ 502

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +RD++ WN+++   A +  G      E  +LF  LR S    +  T   L+ +  +   +
Sbjct: 503 NRDMVIWNAMIFGLAQNERGE-----EAVKLFARLRVSGLTPNEFTFVALVTVASTLASI 557

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
           +  +  H   +K G   D  +S AL+++Y+K G I E + LF+    +DV+ W  M+  Y
Sbjct: 558 FHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTY 617

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           A++G  EE  H+F  +  +G+ P+  +   VL   +  G
Sbjct: 618 AQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAG 656


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/978 (26%), Positives = 442/978 (45%), Gaps = 142/978 (14%)

Query: 73   KSTHARILNSSQIPD----RFLTNNLMTMYSRCGSLVYARRLFDKMPDR--DLISWNSIL 126
            K  HA I  SS          L   L+  Y +CG L  AR +FD MP +  D+  W S++
Sbjct: 117  KRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLM 176

Query: 127  AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            +AYA +G+       E   LFR ++          ++ +LK   S G +   E +HG   
Sbjct: 177  SAYAKAGD-----FQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLE 231

Query: 187  KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            K+GL     V+ AL+ +YS+ G++ +A  +FD M  RD + W  M+     NG+      
Sbjct: 232  KLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVD 291

Query: 247  LFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK------------------ 287
            LF  +   G      +V  VL   + LG     + V  Y++K                  
Sbjct: 292  LFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAA 351

Query: 288  -----LLLY----------------NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 + +Y                ++  NV +WN  + GY +VG+   ++  FV M   
Sbjct: 352  LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHEL 411

Query: 327  NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM------ 380
             +  D       L  +        G   HG  +K GF +   V N+LI+ Y+K       
Sbjct: 412  GIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDA 471

Query: 381  --------------------GC-----------------VCGLRTDQFTLASVLRASSSL 403
                                GC                   G   D  TL SVL A +  
Sbjct: 472  VLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ- 530

Query: 404  PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
                   + +H +++K   + ++ ++ AL+D+Y           +F +    ++ +W AM
Sbjct: 531  SRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAM 590

Query: 464  IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
            I  Y+ +    K   L   M   G R D   + +A+ A      LKQGK +H Y +++G 
Sbjct: 591  ITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGM 650

Query: 524  ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            E  L V++ +++MYVKC  + +A+ IF+ +   D ++W T+I G   N   + + S++  
Sbjct: 651  EKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSD 710

Query: 584  MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            M L    P+  T   ++ A++ +++LE+GR+IHA  ++     D +   +LVDMY KCG 
Sbjct: 711  MLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGA 769

Query: 644  IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            +  A +LF ++  +N + W  M+ G   HG G+  + LFE M+  G+EPD+ +F  +L A
Sbjct: 770  LLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYA 829

Query: 704  CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
            C ++GL +E    F  M+++Y IEP+++HY+ +VD L R G  KEA E I SMP E  +S
Sbjct: 830  CCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSS 889

Query: 764  MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
            +  +LL  CR+  + +  + VA+K+  LEP ++  YVLL+NI+A A +W+ V   + ++ 
Sbjct: 890  IWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIG 949

Query: 824  RKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
             + ++++                         + I   ++ + +R+++ G+ P   + L+
Sbjct: 950  GRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALM 1009

Query: 861  DVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEP 899
              ++   + AL  HS KLA A+G+++ P    I                     + N+E 
Sbjct: 1010 GADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREI 1069

Query: 900  LY--ANRFHHLRDGMCPC 915
            +   ++RFH    G C C
Sbjct: 1070 ILRDSSRFHRFEGGRCSC 1087



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAY-----AMKSGFELDLCVSSGILDMYVKCGAMV 544
           +D  +    V+ CG    L+  K+ HA      A  +G +  + +   ++  Y+KCG + 
Sbjct: 95  VDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSV-LGKRLVLAYLKCGDLG 153

Query: 545 DAQSIFNDIP--APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +A+++F+ +P  A D   WT+++S     G+   A+S++ QM+  GV PD    + ++K 
Sbjct: 154 EARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKC 213

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            S L +L +G  IH  L KL       V  +L+ +Y++CG +EDA  +F  M  R+ + W
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISW 273

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT--GLVSEAYENF 717
           N+M+ G   +G     + LF  M + G E  SVT + VL AC+    GL+ +A   +
Sbjct: 274 NSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGY 330



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 6/196 (3%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GKS H   + +       + N LM MY +C ++  AR +FD++ ++D+ISWN+++  Y+ 
Sbjct: 638 GKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSR 697

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +   N     E F LF  +       + +T+  +L    S   +     +H YAL+ G +
Sbjct: 698 NNFPN-----ESFSLFSDMLLQFR-PNAVTMTCILPAAASISSLERGREIHAYALRRGFL 751

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D + S ALV++Y K G +  A+ LFD + +++++ W +M+  Y  +GFG+    LF  +
Sbjct: 752 EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811

Query: 252 HRSGLCPDDESVQCVL 267
             SG+ PD  S   +L
Sbjct: 812 RGSGIEPDAASFSAIL 827



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 72/343 (20%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           LS+LP   +S +        WF+             G+  H   + +  I +  L N L+
Sbjct: 522 LSVLPACAQSRY--------WFA-------------GRVVHGYSVKTGLIGETSLANALL 560

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA------ENVTEGFR--LF 147
            MYS C       ++F  M  ++++SW +++ +Y  +G  +       E V +G R  +F
Sbjct: 561 DMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVF 620

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
                   F    +L                ++VHGY ++ G+     V+ AL+ +Y K 
Sbjct: 621 AVTSALHAFAGDESLKQ-------------GKSVHGYTIRNGMEKLLPVANALMEMYVKC 667

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
             + EA+ +FD +  +DV+ W  ++  Y+ N F  E F LF D+      P+  ++ C+L
Sbjct: 668 RNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCIL 726

Query: 268 GVISDLGK-RHEEQVQAYAIKLLL----YNNNS------------------------NVV 298
              + +       ++ AYA++       Y +N+                        N++
Sbjct: 727 PAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLI 786

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
            W   ++GY   G    AI  F  M  S ++ D+ +F   L A
Sbjct: 787 SWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYA 829



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 15/180 (8%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL  A S S L  G+  HA  L    + D + +N L+ MY +CG+L+ AR LFD++  ++
Sbjct: 725 ILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKN 784

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           LISW  ++A Y   G G          LF  +R S       + + +L  C  SG   A+
Sbjct: 785 LISWTIMIAGYGMHGFGK-----HAIALFEQMRGSGIEPDAASFSAILYACCHSGL--AA 837

Query: 179 ETVHGYA-----LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
           E    +       KI      +    +V++ S+ G ++EA    + M  E D  +W  +L
Sbjct: 838 EGRRFFKAMQKEYKIEPKLKHYT--CIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLL 895


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 244/823 (29%), Positives = 380/823 (46%), Gaps = 140/823 (17%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH + L  G      +   L++ Y K   I  A++LFD + + D+V    ML AY+ 
Sbjct: 15  ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
            G  +    LF                                    +I+        + 
Sbjct: 75  AGNIKLAHQLF-------------------------------NATPMSIR--------DT 95

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-GTDNLNLGQQIHG 356
           V +N  ++ +    D H A++ FV M R     D  TF   L A++   D     QQ+H 
Sbjct: 96  VSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHC 155

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL-ASVLRASSSLPEGLHLSKQIHV 415
              K G  S   V N+L++ Y  + C      +   L A+  +     P G         
Sbjct: 156 EVFKWGALSVPSVLNALMSCY--VSCASSPLVNSCVLMAAARKLFDEAPPGRR------- 206

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                    D    T +I  Y RN  +  A  L E         WNAMI GY+      +
Sbjct: 207 ---------DEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEE 257

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE----LDLCVSS 531
           A +L   MH+ G +LDE T  + + A     +   G+Q+HAY +++  +      L V++
Sbjct: 258 AFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNN 317

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD--------------------- 570
            ++ +Y +CG +V+A+ +F+ +P  D V+W  ++SGCV+                     
Sbjct: 318 ALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLT 377

Query: 571 ----------NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
                     NG  +  L +++QM+L G+ P ++ +A  + + S L +L+ G+Q+H+ +I
Sbjct: 378 WTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII 437

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           +L   S   VG +L+ MY++CG +E A  +F  M   ++V WNAM+  LAQHG+G + ++
Sbjct: 438 QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQ 497

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           L+E M    + PD +TF+ +LSACS+ GLV E    F  MR  YGI PE +HYS L+D L
Sbjct: 498 LYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLL 557

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
            RAG   EA  +  SMPFE  A +  ALL  C + G+ E G   A++L+ L P     Y+
Sbjct: 558 CRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYI 617

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFA 837
            LSN++AA  QWD+V   R  M+ + VKK+P                          ++ 
Sbjct: 618 SLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYR 677

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
            +E L+  +++ GYVPDT FVL D+E E+KE AL  HSEKLA  YG++  P  + I    
Sbjct: 678 YLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFK 737

Query: 894 -----------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                            + ++E +  +  RFHH R+G C C++
Sbjct: 738 NLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSN 780



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 213/528 (40%), Gaps = 110/528 (20%)

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
           +A   + +  + +H   L SGF    ++ N LI+ Y K                    S 
Sbjct: 6   LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCK--------------------SF 45

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG--FDLAT 459
           ++P   +L  +I     K D VA    +T ++  Y   G++  A  LF        D  +
Sbjct: 46  NIPYARYLFDKIP----KPDIVA----ATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVS 97

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK-QGKQMHAYA 518
           +NAMI  +  S++ H AL+LF  M   G   D  T ++ + A   +   +   +Q+H   
Sbjct: 98  YNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEV 157

Query: 519 MKSGFELDLCVSSGILDMYVKCGA---------MVDAQSIFNDIPA-------------- 555
            K G      V + ++  YV C +         M  A+ +F++ P               
Sbjct: 158 FKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAG 217

Query: 556 ---PDD----------------VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
               DD                VAW  MISG V  G  + A  +  +M   G+  DE+T+
Sbjct: 218 YVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTY 277

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGN--------- 643
             ++ A+S       GRQ+HA +++          +S    L+ +Y +CG          
Sbjct: 278 TSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFD 337

Query: 644 ----------------------IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                                 IE+A  +F++M +R+ + W  M+ GLAQ+G GEE LKL
Sbjct: 338 KMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKL 397

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  MK  G+EP    + G +++CS  G +    +  H    + G +  +   + L+    
Sbjct: 398 FNQMKLEGLEPCDYAYAGAIASCSVLGSLDNG-QQLHSQIIQLGHDSSLSVGNALITMYS 456

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           R G  + A  + L+MP+  S S + A++ A    G       + EK++
Sbjct: 457 RCGLVEAADTVFLTMPYVDSVSWN-AMIAALAQHGHGVQAIQLYEKML 503



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 40/239 (16%)

Query: 71  LGKSTHARILNSSQIPDRF----LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +G+  HA +L +   P       + N L+T+Y+RCG LV ARR+FDKMP +DL+SWN+IL
Sbjct: 292 IGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAIL 351

Query: 127 AAYAHSGEGNAENVTEGFRLFRSL--RESITFT-------------SRLTLAPLLKL--- 168
                SG  NA  + E   +FR +  R  +T+T               L L   +KL   
Sbjct: 352 -----SGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGL 406

Query: 169 -------------CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
                        C   G +   + +H   +++G      V  AL+ +YS+ G +  A  
Sbjct: 407 EPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADT 466

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +F  M   D V W  M+ A A++G G +   L+  + +  + PD  +   +L   S  G
Sbjct: 467 VFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAG 525



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 173/423 (40%), Gaps = 82/423 (19%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
             ++  Y R   LV AR L + M D   ++WN++++ Y H G        E F L R + 
Sbjct: 212 TTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRG-----FYEEAFDLLRRMH 266

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF----VSGALVNIYSKF 207
                    T   ++    ++G       VH Y L+  +         V+ AL+ +Y++ 
Sbjct: 267 SLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRC 326

Query: 208 GKIREAKFLFDGMQERDVV-------------------------------LWKVMLRAYA 236
           GK+ EA+ +FD M  +D+V                                W VM+   A
Sbjct: 327 GKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLA 386

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNS 295
           +NGFGEE   LF  +   GL P D +    +   S LG   + +Q+ +  I+L    ++S
Sbjct: 387 QNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQL---GHDS 443

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++ + N  ++ Y + G    A   F+ M       DSV++   +AA+A        Q  H
Sbjct: 444 SLSVGNALITMYSRCGLVEAADTVFLTM----PYVDSVSWNAMIAALA--------QHGH 491

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLHLSKQ 412
           G                 I +Y KM     +  D+ T  ++L A S    + EG H    
Sbjct: 492 GV--------------QAIQLYEKM-LKEDILPDRITFLTILSACSHAGLVKEGRHYFDT 536

Query: 413 IHV-HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT--WNAMIFGYIL 469
           + V + I  +   D +  + LID+ CR G  +EA+ + E+   F+     W A++ G  +
Sbjct: 537 MRVCYGITPEE--DHY--SRLIDLLCRAGMFSEAKNVTESMP-FEPGAPIWEALLAGCWI 591

Query: 470 SNN 472
             N
Sbjct: 592 HGN 594



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 135/675 (20%), Positives = 234/675 (34%), Gaps = 208/675 (30%)

Query: 61  RHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
           R+    S     ++ HA IL S   P   + N L+  Y +  ++ YAR LFDK+P  D++
Sbjct: 4   RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIV 63

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFR----SLRESITFTS------------------ 158
           +  ++L+AY+ +G     N+    +LF     S+R+++++ +                  
Sbjct: 64  AATTMLSAYSAAG-----NIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLF 118

Query: 159 ----RLTLAP--------LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
               RL   P        L  L L +      + +H    K G +    V  AL++ Y  
Sbjct: 119 VQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVS 178

Query: 207 FGK---------IREAKFLFDGMQ--ERDVVLWKVMLRAYAEN----------------- 238
                       +  A+ LFD      RD   W  ++  Y  N                 
Sbjct: 179 CASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHI 238

Query: 239 --------------GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQA 283
                         GF EE F L   +H  G+  D+ +   V+   S+ G  +   QV A
Sbjct: 239 AVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298

Query: 284 YAIK--------LLLYNNNS------------------------NVVLWNKKLSGYL--- 308
           Y ++         +L  NN+                        ++V WN  LSG +   
Sbjct: 299 YVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNAR 358

Query: 309 ----------------------------QVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                                       Q G     ++ F  M    ++     +  A+A
Sbjct: 359 RIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIA 418

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           + +   +L+ GQQ+H   ++ G  S++ VGN+LI MYS+ G V    T   T+  V    
Sbjct: 419 SCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV---- 474

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
                                   DS    A+I    ++G   +A  L+E     D+   
Sbjct: 475 ------------------------DSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILP- 509

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAM 519
                                         D IT  T + AC    ++K+G+       +
Sbjct: 510 ------------------------------DRITFLTILSACSHAGLVKEGRHYFDTMRV 539

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLAL 578
             G   +    S ++D+  + G   +A+++   +P  P    W  +++GC  +G  ++ L
Sbjct: 540 CYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHG--NMEL 597

Query: 579 SIYHQMRLSGVVPDE 593
            I    RL  ++P +
Sbjct: 598 GIQAADRLLELMPQQ 612


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 232/716 (32%), Positives = 351/716 (49%), Gaps = 95/716 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVVLWN  +  Y   G    AI+ +  M+   +  +  TF   L A +     + G++IH
Sbjct: 83  NVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIH 142

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGC----------------------VCG-------- 385
               +    S V V  +L++ Y+K GC                      + G        
Sbjct: 143 CDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSY 202

Query: 386 -------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                        +  +  T+  VL A + +    H  K+IH   ++   V D  V T +
Sbjct: 203 DEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRH-GKEIHGFCVRRGFVGDVVVGTGI 261

Query: 433 IDVYCRNGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGER-- 489
           +DVY +   +  A  +F+      +  TW+AM+  Y++ +   +ALELF  +    +   
Sbjct: 262 LDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVI 321

Query: 490 -LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            L  +T+AT ++ C  L  L  G  +H YA+KSGF LDL V + +L MY KCG +  A  
Sbjct: 322 VLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMR 381

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
            FN++   D V++T +ISG V NG  +  L ++ +M+LSG+ P++ T A ++ A + L  
Sbjct: 382 FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAG 441

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L  G   H   I    ++D  +  +L+DMYAKCG I+ A  +F +M  R  V WN M++ 
Sbjct: 442 LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIA 501

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG G E L LF++M++ G++PD VTFI ++SACS++GLV+E    F+ M + +GI P
Sbjct: 502 YGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIP 561

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            +EHY+ +VD L RAG  KE    I  MP E    +  ALL ACRV  + E G+ V++K+
Sbjct: 562 RMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKI 621

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------- 832
             L P  +  +VLLSN+++A  +WDD    R   K +  +K P                 
Sbjct: 622 QKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGG 681

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                     I  K++ L+  +K  GY  ++ +V  DVEEEEKER L YHSEKLA A+G+
Sbjct: 682 GYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGI 741

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           +S  P   I+  K                           A+RFHH +DG+C C D
Sbjct: 742 LSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGD 797



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 255/598 (42%), Gaps = 95/598 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTN------NLMTMYSRCGSLVYARRLF 111
           +L   I +  L  GK  H  +L    +  +  LTN       L+ +Y  C  L  AR +F
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74

Query: 112 DKMPDR--DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           DKMP R  +++ WN ++ AYA +G        E   L+  +       +R T   +LK C
Sbjct: 75  DKMPHRPKNVVLWNLLIRAYAWNGP-----YEEAIDLYYKMLGYGITPNRFTFPFVLKAC 129

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            +         +H    ++ L  + +VS ALV+ Y+K G + +AK +FD M +RDVV W 
Sbjct: 130 SALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWN 189

Query: 230 VMLRAYA-ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
            M+  ++   G  +EV  L V + ++ + P+  ++  VL  ++ +   RH +++  + ++
Sbjct: 190 SMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVR 248

Query: 288 -------------LLLYNNNS----------------NVVLWNKKLSGYLQVGDNHGAIE 318
                        L +Y                    N V W+  +  Y+       A+E
Sbjct: 249 RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALE 308

Query: 319 CFVN--MIRSNV-QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
            F    M++ +V    +VT    +   A   +L+ G  +H   +KSGF   ++VGN+L++
Sbjct: 309 LFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLS 368

Query: 376 MYSKMGCV-------------------------------------------CGLRTDQFT 392
           MY+K G +                                            G+  ++ T
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           LASVL A + L  GLH     H +AI     AD+ +  ALID+Y + G +  A  +F+  
Sbjct: 429 LASVLPACAHLA-GLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM 487

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
               + +WN MI  Y +     +AL LF +M + G + D++T    + AC    ++ +GK
Sbjct: 488 HKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547

Query: 513 Q-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              +A     G    +   + ++D+  + G   +  S    +P  PD   W  ++S C
Sbjct: 548 YWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSAC 605



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +++R   + +DL  G   H   + S  + D  + N L++MY++CG +  A R F++M  R
Sbjct: 330 TVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLR 389

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +S+ +I++ Y  +G     N  EG R+F  ++ S     + TLA +L  C     +  
Sbjct: 390 DAVSFTAIISGYVQNG-----NSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHY 444

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
               H YA+  G   D  +  AL+++Y+K GKI  A+ +FD M +R +V W  M+ AY  
Sbjct: 445 GSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGI 504

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G G E   LF ++   GL PDD +  C++   S  G
Sbjct: 505 HGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSG 541



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 143/327 (43%), Gaps = 38/327 (11%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S +SS    +L      + L  GK  H   +    + D  +   ++ +Y +C  + YARR
Sbjct: 217 SPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARR 276

Query: 110 LFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPL 165
           +FD M   ++ ++W++++ AY        + + E   LF  L   ++ +   S +TLA +
Sbjct: 277 IFDMMGIVKNEVTWSAMVGAYV-----VCDFMREALELFCQLLMLKDDVIVLSAVTLATV 331

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           +++C +   +     +H YA+K G V D  V   L+++Y+K G I  A   F+ M  RD 
Sbjct: 332 IRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDA 391

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV-QAY 284
           V +  ++  Y +NG  EE   +F+++  SG+ P+  ++  VL   + L   H       Y
Sbjct: 392 VSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY 451

Query: 285 AI----------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
           AI                            K+    +   +V WN  +  Y   G    A
Sbjct: 452 AIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEA 511

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVA 343
           +  F NM    ++ D VTF+  ++A +
Sbjct: 512 LLLFDNMQSEGLKPDDVTFICLISACS 538


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 253/885 (28%), Positives = 419/885 (47%), Gaps = 119/885 (13%)

Query: 114 MPDRDLISWNSILAAYAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           M DR   +W + ++     G +G A      F + R +RE     S   LA L+  C   
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTA------FEMLRGMRERGVPLSGFALASLVTACERR 54

Query: 173 GY---VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           G    +     +H    + GL+ + ++  AL+++Y   G + +A+ LF  M ER+VV W 
Sbjct: 55  GRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWT 114

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSG-------------LCPDDES-------------- 262
            ++ A + NG+ EE    +  + R G             LC   E+              
Sbjct: 115 ALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 174

Query: 263 --------VQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
                      ++ +  +LG+ H+ +      KL       + + WN  +S Y   G   
Sbjct: 175 GLQNQVSVANSLITMFGNLGRVHDAE------KLFDRMEEHDTISWNAMISMYSHQGICS 228

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
                F +M    ++ D+ T    ++  A +D+ + G  IH   L+S   S+V V N+L+
Sbjct: 229 KCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALV 288

Query: 375 NMYSKMGCVC--------------------------------GLRT-----------DQF 391
           NMYS  G +                                  L+T           +  
Sbjct: 289 NMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHL 348

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T +S L A SS P  L   K +H   ++     +  V  +LI +Y +  SM +AE +F++
Sbjct: 349 TFSSALGACSS-PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQS 407

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ- 510
               D+ ++N +I GY +  +  KA+++FS M ++G + + IT+     +      L   
Sbjct: 408 MPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNY 467

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+ +HAY +++GF  D  V++ ++ MY KCG +  + +IFN I   + V+W  +I+  V 
Sbjct: 468 GRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQ 527

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
            G  + AL ++  M+ +G   D    A  + + + L +LE+G Q+H   +K    SD +V
Sbjct: 528 LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYV 587

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             + +DMY KCG +++   +     +R    WN ++ G A++G  +E  + F+ M A G 
Sbjct: 588 VNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGR 647

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +PD VTF+ +LSACS+ GLV +  + ++ M   +G+ P ++H   +VD LGR GR  EA 
Sbjct: 648 KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAE 707

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           + I  MP   +  + R+LL + R   + E G+  A+KL+ L+PFD SAYVLLSN++A   
Sbjct: 708 KFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNA 767

Query: 811 QWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIK 847
           +W DV   R  MK  N+ K P                       A+ I+AK++ ++ +++
Sbjct: 768 RWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLR 827

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           E GY+ DT   L D +EE+KE+ L+ HSEKLA AYGLI  P  S 
Sbjct: 828 EVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGST 872



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/687 (22%), Positives = 300/687 (43%), Gaps = 84/687 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G + HA    +  + + ++   L+ +Y   G +  A+RLF +MP+R+++SW +++ A + 
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G      + E  R +R +R      +    A ++ LC S         V    +  GL 
Sbjct: 123 NGY-----LEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V+ +L+ ++   G++ +A+ LFD M+E D + W  M+  Y+  G   + F +F D+
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 237

Query: 252 HRSGLCPD----------------------------DESVQCVLGVISDLGKRHEEQVQA 283
              GL PD                              S+   + VI+ L   +    + 
Sbjct: 238 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 284 YAIKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
              + L +N +  +++ WN  +S Y+Q  ++  A++    +  +N   + +TF  AL A 
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 357

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
           +    L  G+ +H   L+      ++VGNSLI MY K   +                   
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYN 417

Query: 384 ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G++ +  T+ ++  + +S  +  +  + +H + I+
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIR 477

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
              ++D +V+ +LI +Y + G++  +  +F +    ++ +WNA+I   +   +  +AL+L
Sbjct: 478 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKL 537

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M  +G +LD + +A  + +C  L  L++G Q+H   MKSG + D  V +  +DMY K
Sbjct: 538 FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGK 597

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG M +   +  D        W T+ISG    G    A   + QM  +G  PD  TF  L
Sbjct: 598 CGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVAL 657

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD-M 656
           + A S    +++G   + N +       P +   + +VD+  + G   +A    ++M  +
Sbjct: 658 LSACSHAGLVDKGIDYY-NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVL 716

Query: 657 RNTVLWNAMLVGLAQHGN---GEETLK 680
            N ++W ++L     H N   G +T K
Sbjct: 717 PNDLIWRSLLSSSRTHKNLEIGRKTAK 743



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 222/568 (39%), Gaps = 104/568 (18%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           S   L F    H      ++   S++    S+     G   H+  L SS      + N L
Sbjct: 228 SKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINAL 287

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MYS  G L  A  LF  M  RDLISWN+++++Y  +      N T+  +    L  + 
Sbjct: 288 VNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNC-----NSTDALKTLGQLFHTN 342

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              + LT +  L  C S G +   + VH   L++ L  +  V  +L+ +Y K   + +A+
Sbjct: 343 ESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAE 402

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +F  M   D+V + V++  YA    G +   +F  +  +G+ P+  ++  + G  +   
Sbjct: 403 KVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSN 462

Query: 275 KRHE--EQVQAYAIK-------------LLLYN---------------NNSNVVLWNKKL 304
             H     + AY I+             + +Y                 N N+V WN  +
Sbjct: 463 DLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAII 522

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +  +Q+G    A++ F++M  +  + D V     L++ A   +L  G Q+HG  +KSG  
Sbjct: 523 AANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLD 582

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
           S   V N+ ++MY K G     + D+                        +  + +  + 
Sbjct: 583 SDSYVVNAAMDMYGKCG-----KMDEM-----------------------LQVVPDQAIR 614

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
                  LI  Y + G   EAE                               E F  M 
Sbjct: 615 PQQCWNTLISGYAKYGYFKEAE-------------------------------ETFKQMV 643

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVK 539
            +G + D +T    + AC    ++ +G   +     ++ +  G +  +C    I+D+  +
Sbjct: 644 ATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVC----IVDLLGR 699

Query: 540 CGAMVDAQSIFNDIPA-PDDVAWTTMIS 566
            G   +A+    ++P  P+D+ W +++S
Sbjct: 700 LGRFAEAEKFIEEMPVLPNDLIWRSLLS 727


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 249/798 (31%), Positives = 383/798 (47%), Gaps = 116/798 (14%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
           T T + T + + + C     +   +  H   +        FV+  L+ +Y K   +  A 
Sbjct: 38  TPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAF 97

Query: 215 FLFDGMQERDVVLWKVMLRAYAENG--------------FGEEVFHLF-VDLHRSGLCPD 259
            +FDGM +RD V W  ML  YA  G               G  V  LF   + R G   D
Sbjct: 98  KVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFD 157

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY----LQVGDNHG 315
             +   VL   S L + H   +Q + + + +   + +VV  +  L  Y    +Q  D  G
Sbjct: 158 RTTFAVVLKSCSSL-EDHGGGIQIHGLAVKM-GFDCDVVTGSALLDMYAKCCVQNDDLRG 215

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
            +E F  M ++ V                        Q+HG  LK+ F + V++G + ++
Sbjct: 216 GLELFKEMQKAGVG---------------------ALQLHGHALKTDFGTDVVIGTATLD 254

Query: 376 MYSKMGCVC--------------------------------------------GLRTDQF 391
           MY K   +                                             GL  D+ 
Sbjct: 255 MYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 314

Query: 392 TLASVLRASSSLP---EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +L+   RA + +    EGL    Q+H  ++K+   ++  V+ A++D+Y + G++ EA  +
Sbjct: 315 SLSGAXRACAVIKGDLEGL----QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 370

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE     D  +WNA+I  +  + N  K L LF  M  SG   DE T  + +KAC     L
Sbjct: 371 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQAL 430

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G ++H   +KS   LD  V   ++DMY KCG M  A+ + + +     V+W  +ISG 
Sbjct: 431 NCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGF 490

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
               + + A   + +M   GV PD FT+A ++   + L  +E G+QIHA +IK +  SD 
Sbjct: 491 SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDA 550

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           ++  +LVDMY+KCGN++D  ++F++   R+ V WNAM+ G AQHG GEE LK+FE M+  
Sbjct: 551 YISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLE 610

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            V+P+  TF+ VL AC + GLV +    FH M   YG++P++EHYS +VD +GR+G+  +
Sbjct: 611 NVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSK 670

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A ELI  MPFEA A + R LL  C++ G+ E  +  A  ++ LEP DS+AYVLLSNI+A 
Sbjct: 671 ALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYAN 730

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
           A  W++VT  R  M+   +KK+P                       +  I+  ++ L   
Sbjct: 731 AGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDE 790

Query: 846 IKEGGYVPDTDFVLLDVE 863
           +K  GY+PDTDF+L D E
Sbjct: 791 MKWVGYMPDTDFILNDDE 808



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 179/708 (25%), Positives = 291/708 (41%), Gaps = 153/708 (21%)

Query: 12  RHKHTYVIFSSF-TKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS-ILRHAISTSDL 69
           RH      F +F +K  ++ LP     + PF   S + ++ +  + FS I +       L
Sbjct: 7   RHLFPIRFFFNFQSKSPFKTLP-----ISPF---SSYQATPTKKKTFSHIFQECSDRKAL 58

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             GK  HAR++ +   P  F+TN L+ MY +C  L +A ++FD MP RD +SWN++L  Y
Sbjct: 59  CPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGY 118

Query: 130 AHSGE------------GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           A  G+            G    V E F  FR  R    F  R T A +LK C S      
Sbjct: 119 AGRGDIGVAQKLFDAMPGTGCGVVELFD-FRMGRMGTVF-DRTTFAVVLKSCSSLEDHGG 176

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKF----GKIREAKFLFDGMQE----------- 222
              +HG A+K+G   D     AL+++Y+K       +R    LF  MQ+           
Sbjct: 177 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGH 236

Query: 223 -------RDVVL--------------------------------WKVMLRAYAENGFGEE 243
                   DVV+                                +  ++  YA +  G E
Sbjct: 237 ALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIE 296

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN--------- 293
              +F  L +SGL  D+ S+       + + G     QV   ++K L  +N         
Sbjct: 297 ALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 356

Query: 294 -------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                              + + V WN  ++ + Q G+    +  FV M++S ++ D  T
Sbjct: 357 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 416

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------- 383
           +   L A AG   LN G +IH   +KS       VG +LI+MYSK G +           
Sbjct: 417 YGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 476

Query: 384 --------------------------------CGLRTDQFTLASVLRASSSLPEGLHLSK 411
                                            G+  D FT A++L   ++L   + L K
Sbjct: 477 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT-VELGK 535

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           QIH   IK +  +D+++S+ L+D+Y + G+M + + +FE     D  TWNAM+ GY    
Sbjct: 536 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 595

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVS 530
              +AL++F +M     + +  T    ++ACG + ++++G    H+     G +  L   
Sbjct: 596 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 655

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           S ++D+  + G +  A  +   +P   D V W T++S C  +G  ++A
Sbjct: 656 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 248/790 (31%), Positives = 385/790 (48%), Gaps = 98/790 (12%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           LA LL   +S+  +     VH   +  GL +D F+S  L++ Y K G + +A  LFD M 
Sbjct: 43  LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV--QCVLGVISDLGKRHEE 279
            R++V W  ++  Y + G+ E+    F++  R+ +   +E +    +   +   G     
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGS 162

Query: 280 QVQAYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYLQVG 311
           QV +Y IK             ++LY  +  +               V W   ++GY + G
Sbjct: 163 QVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSG 222

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
            +  +++ F  M+ SNV  D       L A +    L  G+QIH   L+S     V   N
Sbjct: 223 RSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYN 282

Query: 372 SLINMYSKMGCV-------------------------------------------CGLRT 388
            LI+ Y+K G V                                            G + 
Sbjct: 283 VLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKP 342

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D++  +SVL +  S+ + L   +QIH + IK     D+FV+ ALID+Y +  ++ +A+ +
Sbjct: 343 DEYACSSVLTSCGSV-DALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRV 401

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+      +  +NAMI GY        ALE+F  M         +T  + +     LL L
Sbjct: 402 FDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCL 461

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +  KQ+H   +K GF LD   SS ++D+Y KC  + DA+ +F      D V W ++ SG 
Sbjct: 462 QLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGY 521

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
               + + A  +Y  ++LS   P+EFTFA L  A+S L +L  G+Q H  ++K+   SDP
Sbjct: 522 NLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDP 581

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           F+  +LVDMYAKCG++E+A  +F     ++T  WN+M+   AQHG  EE L++FE M ++
Sbjct: 582 FITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSN 641

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            + P+ VTF+ VLSACS+ G V +  ++++ M  +YGIEP +EHY+ +V  LGRAGR  E
Sbjct: 642 NINPNYVTFVSVLSACSHVGFVEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTE 700

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A E I  M    +A + R+LL ACRV G+ E  K  AE  ++++P DS +YV+LSNIFA+
Sbjct: 701 AREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFAS 760

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
              W DV   R +M    V K+P                        DLI+  ++ L  +
Sbjct: 761 KGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQ 820

Query: 846 IKEGGYVPDT 855
           +K+ G V DT
Sbjct: 821 MKDVGCVHDT 830



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 197/729 (27%), Positives = 322/729 (44%), Gaps = 86/729 (11%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARI 79
           FSS + +    LPSFS   +    ++            ++L   +S   +L  +  H ++
Sbjct: 17  FSSISPNVQPMLPSFSSQNVKVKGRA----------LANLLLAPVSNKSILYYRKVHCQV 66

Query: 80  LNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAEN 139
           +      D FL+N L+  Y + GS+  A  LFDKMP+R+L+SW+S+++ Y   G    E 
Sbjct: 67  VLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYN--EK 124

Query: 140 VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
               F  F+  R  +   +   LA +++ C+          VH Y +K G   D +V  +
Sbjct: 125 ALLYFLEFQ--RTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTS 182

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           LV +Y+K G+I +A+ +FDG+  +  V W  ++  Y ++G  E    LF  +  S + PD
Sbjct: 183 LVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPD 242

Query: 260 DESVQCVLGVISDLGK-RHEEQVQAYAIK------LLLYN-------------------- 292
              +  +L   S LG  +  +Q+ AY ++      +  YN                    
Sbjct: 243 KYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFD 302

Query: 293 --NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
             +  N++ W   ++GY+Q   +  A+E    M R   + D       L +    D L  
Sbjct: 303 RLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQH 362

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------------------- 379
           G+QIH   +K        V N+LI+MYSK                               
Sbjct: 363 GRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSR 422

Query: 380 MGCVCG-------LR----TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
            G +CG       +R    +  F     L   S+    L LSKQIH   IK     D F 
Sbjct: 423 QGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFT 482

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S+ALIDVY +   + +A Y+FE     D+  WN++  GY L   S +A +L+S +  S E
Sbjct: 483 SSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRE 542

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           R +E T A    A   L  L  G+Q H   MK G E D  +++ ++DMY KCG++ +A+ 
Sbjct: 543 RPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEK 602

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           IF+     D   W +MIS    +G+ + AL ++  M  + + P+  TF  ++ A S +  
Sbjct: 603 IFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGF 662

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAMLV 667
           +E G Q + ++ +           S+V +  + G + +A    ++M +R   L W ++L 
Sbjct: 663 VEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLS 722

Query: 668 GLAQHGNGE 676
                GN E
Sbjct: 723 ACRVFGNVE 731


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 232/721 (32%), Positives = 354/721 (49%), Gaps = 98/721 (13%)

Query: 237 ENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------- 287
           + G+ EE   +FVDL R SG  P++  +  V+   + LG   +  Q+  + ++       
Sbjct: 13  DEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 72

Query: 288 ------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 +  Y+ N B+               V W   ++GY + G +  ++E F  M  +
Sbjct: 73  YVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRET 132

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--- 383
           NV  D       L+A +  + L  G+QIH   L+ G    V V N LI+ Y+K   V   
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 192

Query: 384 ----------------------------------------CGLRTDQFTLASVLRASSSL 403
                                                    G + D F   SVL +  SL
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            E L   +Q+H + IK +  ++ FV   LID+Y ++  + +A+ +F+     ++ ++NAM
Sbjct: 253 -EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAM 311

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY       +ALELF  M         +T  + +     L  L+  KQ+H   +K G 
Sbjct: 312 IEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGV 371

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            LDL   S ++D+Y KC  + DA+ +F ++   D V W  M  G   + E + AL +Y  
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYST 431

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           ++ S   P+EFTFA L+ A+S L +L  G+Q H  L+K+     PFV  +LVDMYAKCG+
Sbjct: 432 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 491

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           IE+A  +F     R+ V WN+M+   AQHG  EE L +F +M   G++P+ VTF+ VLSA
Sbjct: 492 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 551

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ G V +   +F+ M   +GI+P  EHY+ +V  LGR+G+  EA E I  MP E +A 
Sbjct: 552 CSHAGXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 610

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           + R+LL ACR+ G+ E GK+ AE  ++ +P DS +Y+LLSNIFA+   W DV   R  M 
Sbjct: 611 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 670

Query: 824 RKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
              V K+P                       AD+I + ++ LI+ IK  GYVPD   +L+
Sbjct: 671 SSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPDATALLM 730

Query: 861 D 861
           +
Sbjct: 731 N 731



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 142/597 (23%), Positives = 245/597 (41%), Gaps = 87/597 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R       +  G   H  ++ S    D ++  +L+  YS+ G +  AR +FD++ ++
Sbjct: 42  SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEK 101

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W +I+A Y   G            LF  +RE+     R  ++ +L  C    ++  
Sbjct: 102 TAVTWTTIIAGYTKCGRSXV-----SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 156

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y L+ G   D  V   L++ Y+K  +++  + LFD M  ++++ W  M+  Y +
Sbjct: 157 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 216

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN--- 293
           N F  E   LF +++R G  PD  +   VL     L    +  QV AY IK  L +N   
Sbjct: 217 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFV 276

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      NV+ +N  + GY        A+E F  M     
Sbjct: 277 KNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 336

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR- 387
               +TF+  L   A    L L +QIHG  +K G    +  G++LI++YSK   V   R 
Sbjct: 337 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARH 396

Query: 388 ------------------------------------------TDQFTLASVLRASSSLPE 405
                                                      ++FT A+++ A+S+L  
Sbjct: 397 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 456

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
             H  +Q H   +K       FV+ AL+D+Y + GS+ EA  +F +    D+  WN+MI 
Sbjct: 457 LRH-GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 515

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHAYAMKS 521
            +     + +AL +F  M   G + + +T    + AC     ++ G      M  + +K 
Sbjct: 516 THAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKP 575

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           G E   CV S    +  + G + +A+     +P  P  + W +++S C   G  +L 
Sbjct: 576 GTEHYACVVS----LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELG 628


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 225/709 (31%), Positives = 363/709 (51%), Gaps = 91/709 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           VL++  L G+ +V D   A++ FV M   +V+     F   L        L +G++IHG 
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG------------------------------------ 381
            +KSGF   +     L NMY+K                                      
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 382 -------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                  C   L+    T+ SVL A S+L   + + K+IH +A+++   +   +STAL+D
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSAL-RLISVGKEIHGYAMRSGFDSLVNISTALVD 279

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+  A  LF+     ++ +WN+MI  Y+ + N  +A+ +F  M   G +  +++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +  A+ AC  L  L++G+ +H  +++ G + ++ V + ++ MY KC  +  A S+F  + 
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           +   V+W  MI G   NG    AL+ + QMR   V PD FT+  ++ A + L+     + 
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH  +++     + FV  +LVDMYAKCG I  A ++F  M  R+   WNAM+ G   HG 
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G+  L+LFE+M+   ++P+ VTF+ V+SACS++GLV    + F++M+E Y IE  ++HY 
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD LGRAGR  EA + I+ MP + + +++ A+LGAC++  +    +  AE+L  L P 
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------------- 831
           D   +VLL+NI+ AA+ W+ V   R  M R+ ++K P                       
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699

Query: 832 ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
           +  I+A +E LI  IKE GYVPDT+ V L VE + KE+ L  HSEKLA ++GL++T   +
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAGT 758

Query: 892 VI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            I                     ++ +E +  +  RFHH ++G C C D
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGD 807



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 4/315 (1%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           A +L   SSL E     +QI     KN    + F  T L+ ++CR GS+ EA  +FE  D
Sbjct: 41  ALLLERCSSLKE----LRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
                 ++ M+ G+   ++  KAL+ F  M               +K CG    L+ GK+
Sbjct: 97  SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   +KSGF LDL   +G+ +MY KC  + +A+ +F+ +P  D V+W T+++G   NG 
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
             +AL +   M    + P   T   ++ A S L  +  G++IH   ++    S   +  +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           LVDMYAKCG++E A  LF  M  RN V WN+M+    Q+ N +E + +F+ M   GV+P 
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336

Query: 694 SVTFIGVLSACSYTG 708
            V+ +G L AC+  G
Sbjct: 337 DVSVMGALHACADLG 351



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 256/606 (42%), Gaps = 106/606 (17%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           ++L +GK  H  ++ S    D F    L  MY++C  +  AR++FD+MP+RDL+SWN+I+
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A Y+ +G            + +S+ E     S +T+  +L    +   +   + +HGYA+
Sbjct: 209 AGYSQNGMARM-----ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + G      +S ALV++Y+K G +  A+ LFDGM ER+VV W  M+ AY +N   +E   
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLLYNNNSNV-------- 297
           +F  +   G+ P D SV   L   +DLG     + +   +++L L  N S V        
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383

Query: 298 --------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                               V WN  + G+ Q G    A+  F  M    V+ D+ T++ 
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
            + A+A     +  + IHG  ++S     V V  +L++MY+K G                
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA--------------- 488

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGF 455
                          I +  +  D +++  V+T  A+ID Y  +G               
Sbjct: 489 ---------------IMIARLIFDMMSERHVTTWNAMIDGYGTHG--------------- 518

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
                    FG         ALELF  M     + + +T  + + AC    +++ G +  
Sbjct: 519 ---------FG-------KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562

Query: 516 AYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNG 572
            Y MK  + ++L +     ++D+  + G + +A      +P    V  +  M+  C  + 
Sbjct: 563 -YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 621

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILV-KASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
             + A       RL  + PD+  + +L+       +  E+  Q+  ++++      P  G
Sbjct: 622 NVNFAEKAAE--RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP--G 677

Query: 632 ISLVDM 637
            S+V++
Sbjct: 678 CSMVEI 683



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 145/311 (46%), Gaps = 35/311 (11%)

Query: 63  AISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           A+S   L+ +GK  H   + S       ++  L+ MY++CGSL  AR+LFD M +R+++S
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           WNS++ AY  +     EN  E   +F+ + +     + +++   L  C   G +     +
Sbjct: 305 WNSMIDAYVQN-----ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H  ++++GL  +  V  +L+++Y K  ++  A  +F  +Q R +V W  M+  +A+NG  
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ--------------------- 280
            +  + F  +    + PD  +   V+  I++L   H  +                     
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479

Query: 281 VQAYA------IKLLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
           V  YA      I  L+++  +  +V  WN  + GY   G    A+E F  M +  ++ + 
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539

Query: 333 VTFLVALAAVA 343
           VTFL  ++A +
Sbjct: 540 VTFLSVISACS 550


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 228/711 (32%), Positives = 359/711 (50%), Gaps = 92/711 (12%)

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           S + LWN  +S Y   G+   +I  F  M+   ++ +S TF   L   A    +  G+Q+
Sbjct: 214 SKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273

Query: 355 HGTTLKSGFYSAVIVGNSLINMY---SKMGC----------------------------- 382
           HG   K GF S   V NSLI+ Y    K+ C                             
Sbjct: 274 HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLD 333

Query: 383 -----------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVST 430
                      V G+  D  T+ +V  A +++   L L K +H ++IK  T+  +   + 
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGT-LLLGKVLHSYSIKAATLDREVRFNN 392

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            L+D+Y + G +  A  +FE  D   + +W +MI GY+    S  A++LF  M + G   
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP 452

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D   + + + AC     LK GK +H Y  ++  E +  VS+ + DMY KCG+M DA  +F
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   D ++W TMI G   N   + AL+++ +M+     PD  T A ++ A + L AL+
Sbjct: 513 SHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPACASLAALD 571

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +GR+IH   ++   S D +V  ++VDMY KCG +  A  LF  +  ++ V W  M+ G  
Sbjct: 572 KGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYG 631

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG G E +  F  M+  G+EPD V+FI +L ACS++GL+ E ++ F++M+++  IEP +
Sbjct: 632 MHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNL 691

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +VD L R G   +A + I +MP +  A++  ALL  CR+  D +  + VAE++  
Sbjct: 692 EHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFE 751

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFA--- 837
           LEP ++  YVLL+NI+A A +W++V   R ++ ++ +KK+P           ++  A   
Sbjct: 752 LEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDC 811

Query: 838 ------KVEGLIKRI----KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                 K+E L+KR+    KE GY P T + LL+ +E EKE AL  HSEKLA A+G+++ 
Sbjct: 812 SKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNL 871

Query: 888 PPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           PP   I   K                           ++RFHH +DG C C
Sbjct: 872 PPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSC 922



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 150/634 (23%), Positives = 264/634 (41%), Gaps = 94/634 (14%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ LL   Q S+F   +    + SIL+       +  G+   + I +S  + D  L   L
Sbjct: 136 AMELLCSSQNSNFDLGA----YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKL 191

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY +CG L   R +FDK+ +  +  WN +++ Y+ SG     N  E   LF+ + E  
Sbjct: 192 VFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSG-----NYGESINLFKQMLELG 246

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  T + +LK   +   V     VHG   K+G      V  +L++ Y    K+R A+
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ 306

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LFD + +RDV+ W  M+  Y +NG  +    +F+ +   G+  D  ++  V    +++G
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366

Query: 275 K------RHEEQVQAY------------------------AIKLLLYNNNSNVVLWNKKL 304
                   H   ++A                         AI++    +   VV W   +
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +GY++ G + GAI+ F  M    V  D       L A A   NL  G+ +H    ++   
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486

Query: 365 SAVIVGNSLINMYSKMGCVCGL-------------------------------------- 386
           +   V N+L +MY+K G +                                         
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM 546

Query: 387 ----RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
               + D  T+A +L A +SL   L   ++IH +A++N    D +V+ A++D+Y + G +
Sbjct: 547 QRESKPDGTTVACILPACASLA-ALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLL 605

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  LF+     DL +W  MI GY +     +A+  F+ M  +G   DE++  + + AC
Sbjct: 606 VLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYAC 665

Query: 503 GCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
               +L +G K  +    +   E +L   + ++D+  + G +V A      +P  PD   
Sbjct: 666 SHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATI 725

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           W  ++ GC           I+H ++L+  V +  
Sbjct: 726 WGALLCGC----------RIHHDVKLAEKVAERI 749



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 168/339 (49%), Gaps = 14/339 (4%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  +   L+ +Y + G + E   +F+      +  WN MI  Y  S N  +++ LF  M 
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 243

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G + +  T ++ +K    +  +++G+Q+H    K GF     V + ++  Y     + 
Sbjct: 244 ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVR 303

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            AQ +F+++   D ++W +MISG V NG +D  + I+ +M + GV  D  T   +  A +
Sbjct: 304 CAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363

Query: 605 CLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
            +  L  G+ +H+  IK   LD   +     +L+DMY+KCG++  A  +F++MD +  V 
Sbjct: 364 NIGTLLLGKVLHSYSIKAATLD--REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVS 421

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           W +M+ G  + G  +  +KLF++MK+ GV PD      +L+AC+  G +         +R
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481

Query: 722 EKYGIEPEVEHYSFLVDAL----GRAGRTKEAGELILSM 756
           E       +E  SF+ +AL     + G  K+A ++   M
Sbjct: 482 EN-----NLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 171/392 (43%), Gaps = 47/392 (11%)

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+EL      S    D     + ++ C     ++ G+++ +    SG  +D  +   ++ 
Sbjct: 136 AMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVF 193

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MYVKCG + + + +F+ +       W  MIS    +G    +++++ QM   G+ P+ +T
Sbjct: 194 MYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYT 253

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ ++K  + +  +E+GRQ+H  + KL  +S   V  SL+  Y     +  A  LF ++ 
Sbjct: 254 FSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 313

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG--LVSEA 713
            R+ + WN+M+ G  ++G  +  +++F  M   GV+ D  T + V  AC+  G  L+ + 
Sbjct: 314 DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKV 373

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR------- 766
             ++ +  +   ++ EV   + L+D   + G    A  +   M  +   S          
Sbjct: 374 LHSYSI--KAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR 431

Query: 767 ---------------------------ALLGACRVQGDTETGK----WVAEKLMALEPFD 795
                                      ++L AC + G+ ++GK    ++ E  +    F 
Sbjct: 432 EGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFV 491

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           S+A   L++++A      D       MK+K+V
Sbjct: 492 SNA---LTDMYAKCGSMKDAHDVFSHMKKKDV 520


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 242/844 (28%), Positives = 381/844 (45%), Gaps = 123/844 (14%)

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           K+  +D   WNS++   A     N +N       +  +       +  TL  +LK C + 
Sbjct: 19  KIQIKDPKHWNSVIKHQA-----NLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ 73

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             V   +++H       L+ D  V  A+V+ Y K G + +A+ +FD M +RDVVLW  M+
Sbjct: 74  NAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMV 133

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLY 291
             Y   G  EE   L  ++ R  L P+  ++  +L       + R    V  Y ++  ++
Sbjct: 134 YGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMF 193

Query: 292 NNNS----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           ++N                             N+V WN  +SGY  VGD   A+E FV M
Sbjct: 194 DSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 253

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +   V++D VT LVA+ A A   +L LG+QIH   +K  F   + + N+L+NMYS  G +
Sbjct: 254 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSL 313

Query: 384 -----------------------------C--------------GLRTDQFTLASVLRAS 400
                                        C              G++ D+ T+  +L   
Sbjct: 314 ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 373

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             L  GL   K +H H IK+    D+ +  AL+ +Y     +   + +F+   G D+ +W
Sbjct: 374 EELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISW 433

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N MI     +    +A ELF  M  S  + +  TI + + AC  +  L  G+ +H Y MK
Sbjct: 434 NTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK 493

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
              E++  + + + DMY+ CG    A+ +F   P  D ++W  MI               
Sbjct: 494 HSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXK------------- 540

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGISLVDMY 638
                     P+  T   ++ + + L  L QG+ +HA + +       D  +  + + MY
Sbjct: 541 --------AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMY 592

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           A+CG+++ A  +FK +  RN + WNAM+ G   +G G + +  F  M   G  P+ VTF+
Sbjct: 593 ARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFV 652

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VLSACS++G +    + FH M + + + PE+ HYS +VD L R G   EA E I SMP 
Sbjct: 653 SVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPI 712

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E  AS+ RALL +CR   D +  K + EKL  LEP ++  YVLLSN++A A  W +V   
Sbjct: 713 EPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRI 772

Query: 819 RGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDT 855
           R  +K K ++K P                       +D I+AK+  L+  ++E GY PD 
Sbjct: 773 RTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDL 832

Query: 856 DFVL 859
            +V 
Sbjct: 833 RWVF 836



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 181/700 (25%), Positives = 308/700 (44%), Gaps = 110/700 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GKS H  I  +  + D  +   ++  Y +CG +  AR +FD M DRD++ WN+++  Y +
Sbjct: 79  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMV--YGY 136

Query: 132 SGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            G G  E   E   L R + RE++   SR T+  LL  C  +  +     VHGY L+ G+
Sbjct: 137 VGWGCYE---EAMLLVREMGRENLRPNSR-TMVALLLACEGASELRLGRGVHGYCLRNGM 192

Query: 191 V-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              +  V+ AL+  Y +F  +R    LFD M  R++V W  M+  Y + G   +   LFV
Sbjct: 193 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 251

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNNNS 295
            +    +  D  ++   +   ++LG  +  +Q+   AIK             L +Y+NN 
Sbjct: 252 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 311

Query: 296 NV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           ++                LWN  +S Y   G +  A++ F+ M    V+ D  T ++ L+
Sbjct: 312 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 371

Query: 341 AVAG-TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------- 383
                   L  G+ +H   +KSG      +GN+L++MY+++ CV                
Sbjct: 372 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 431

Query: 384 ------------------CGL---------RTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                             C L         + + +T+ S+L A   +   L   + IH +
Sbjct: 432 SWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDV-TCLDFGRSIHGY 490

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            +K+    +  + TAL D+Y   G  A A  LFE     DL +WNAMI            
Sbjct: 491 VMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI------------ 538

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE--LDLCVSSGIL 534
                         + +TI   + +   L  L QG+ +HAY  + GF   LDL +++  +
Sbjct: 539 ---------XKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFI 589

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            MY +CG++  A++IF  +P  + ++W  MI+G   NG    A+  + QM   G  P+  
Sbjct: 590 TMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGV 649

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQ 653
           TF  ++ A S    +E G Q+  ++++    +   V  S +VD+ A+ G I++A      
Sbjct: 650 TFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDS 709

Query: 654 MDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           M +  +  +W A+L     + + ++   +FE  K   +EP
Sbjct: 710 MPIEPDASVWRALLSSCRAYSDAKQAKTIFE--KLDKLEP 747



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 136/579 (23%), Positives = 246/579 (42%), Gaps = 72/579 (12%)

Query: 67  SDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           S+L LG+  H   L +     +  +   L+  Y R    V    LFD M  R+++SWN++
Sbjct: 175 SELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAM 233

Query: 126 LAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ Y   G+       +   LF + L + + F   +T+   ++ C   G +   + +H  
Sbjct: 234 ISGYYDVGD-----YFKALELFVQMLVDEVKFDC-VTMLVAVQACAELGSLKLGKQIHQL 287

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A+K   V D ++  AL+N+YS  G +  +  LF+ +  RD  LW  M+ AYA  G  EE 
Sbjct: 288 AIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEA 347

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDL--GKRHEEQVQAYAIK-------------LL 289
             LF+ +   G+  D+ +V  +L +  +L  G    + + A+ IK             L 
Sbjct: 348 MDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLS 407

Query: 290 LYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y                   +++ WN  +    +      A E F  M  S ++ +S T
Sbjct: 408 MYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYT 467

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------- 381
            +  LAA      L+ G+ IHG  +K        +  +L +MY   G             
Sbjct: 468 IISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCP 527

Query: 382 ---------CVCGLRTDQFTLASVLRASS---SLPEGLHLSKQIHVHAIKN--DTVADSF 427
                     +     +  T+ +VL + +   +LP+G    + +H +  +       D  
Sbjct: 528 DRDLISWNAMIXKAEPNSVTIINVLSSFTHLATLPQG----QSLHAYVTRRGFSLGLDLS 583

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           ++ A I +Y R GS+  AE +F+     ++ +WNAMI GY ++     A+  FS M   G
Sbjct: 584 LANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDG 643

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
            R + +T  + + AC     ++ G Q+ H+         +L   S I+D+  + G + +A
Sbjct: 644 FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEA 703

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +   + +P  PD   W  ++S C    +   A +I+ ++
Sbjct: 704 REFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 742



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 28/220 (12%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            SIL      + L  G+S H  ++  S   ++ L   L  MY  CG    AR LF+  PD
Sbjct: 469 ISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPD 528

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RDLISWN+++       E N+  +              +FT   TL              
Sbjct: 529 RDLISWNAMIX----KAEPNSVTIINVLS---------SFTHLATLP------------- 562

Query: 177 ASETVHGYALKIG--LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
             +++H Y  + G  L  D  ++ A + +Y++ G ++ A+ +F  + +R+++ W  M+  
Sbjct: 563 QGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAG 622

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           Y  NG G +    F  +   G  P+  +   VL   S  G
Sbjct: 623 YGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSG 662


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 209/581 (35%), Positives = 325/581 (55%), Gaps = 49/581 (8%)

Query: 384 CG-LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           CG L  D+    ++L+  + L + L   K +H H + ++   D  +  +L+ +Y R GS+
Sbjct: 67  CGSLEPDRTLYNTLLKRCTQLGK-LKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSL 125

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  LF+     D+ +W +MI GY  ++ +  AL LF  M + G   +E T+++ VK C
Sbjct: 126 EGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCC 185

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           G +     G+Q+HA   K G   ++ V S ++DMY +CG + +A  +F+ +   ++V+W 
Sbjct: 186 GYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWN 245

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            +I+G    GE + AL+++ +M+  G  P EFT++ L+ + S +  LEQG+ +HA+L+K 
Sbjct: 246 ALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS 305

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
                 +VG +L+ MYAK G+I DA  +F ++   + V  N+ML+G AQHG G+E  + F
Sbjct: 306 SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           ++M   G+EP+ +TF+ VL+ACS+  L+ E    F LMR KY IEP+V HY+ +VD LGR
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLLGR 424

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG   +A   I  MP E + ++  ALLGA ++  +TE G + A+++  L+P     + LL
Sbjct: 425 AGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLL 484

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKV 839
           +NI+A+A +W+DV   R  MK   VKK+PA                       + I    
Sbjct: 485 ANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMW 544

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
           E L ++IKE GYVPDT  VLL V+++EKE  L YHSEKLA ++ L++TPP S I      
Sbjct: 545 EKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNI 604

Query: 894 ---------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                          +  +E +    NRFHH  DG C C D
Sbjct: 605 RVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGD 645



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 7/378 (1%)

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S NS   L +   +       D     T +K C  L  LK+GK +H + + S F+ DL +
Sbjct: 52  SLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVI 111

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +L MY +CG++  A+ +F+++P  D V+WT+MI+G   N     AL ++ +M   G 
Sbjct: 112 QNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGA 171

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+EFT + LVK    + +   GRQIHA   K  C S+ FVG SLVDMYA+CG + +A +
Sbjct: 172 EPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAML 231

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++  +N V WNA++ G A+ G GEE L LF  M+  G  P   T+  +LS+CS  G 
Sbjct: 232 VFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGC 291

Query: 710 VSEA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           + +  + + HLM+    +   V   + L+    ++G  ++A ++   +      S +  L
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVG--NTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSML 349

Query: 769 LGACRVQGDTETGKWVAEKL-MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           +G  +     E  +   E +   +EP D +   +L+   + A   D+     G M++ N+
Sbjct: 350 IGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTAC-SHARLLDEGKHYFGLMRKYNI 408

Query: 828 KKDPADLIFAKVEGLIKR 845
             +P    +A +  L+ R
Sbjct: 409 --EPKVSHYATIVDLLGR 424



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 34/353 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+       L  GK  H  +LNS+   D  + N+L+ MY+RCGSL  ARRLFD+MP R
Sbjct: 79  TLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHR 138

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW S++  YA +     +  ++   LF  +       +  TL+ L+K C        
Sbjct: 139 DMVSWTSMITGYAQN-----DRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNC 193

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H    K G   + FV  +LV++Y++ G + EA  +FD +  ++ V W  ++  YA 
Sbjct: 194 GRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYAR 253

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYN 292
            G GEE   LFV + R G  P + +   +L   S +     GK     +   + KL+ Y 
Sbjct: 254 KGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYV 313

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            N+                        +VV  N  L GY Q G    A + F  MIR  +
Sbjct: 314 GNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGI 373

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           + + +TFL  L A +    L+ G+   G   K      V    +++++  + G
Sbjct: 374 EPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAG 426



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 163/431 (37%), Gaps = 89/431 (20%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LLK C   G +   + VH + L      D  +  +L+ +Y++ G +  A+ LFD M  RD
Sbjct: 80  LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRD 139

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQA 283
           +V W  M+  YA+N    +   LF  +   G  P++ ++  ++     +   +   Q+ A
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199

Query: 284 YAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGDNHG 315
              K   ++N                              N V WN  ++GY + G+   
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  FV M R   +    T+   L++ +    L  G+ +H   +KS       VGN+L++
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLH 319

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MY+K G +              R +  + + L          +K D V+      +++  
Sbjct: 320 MYAKSGSI--------------RDAEKVFDKL----------VKVDVVS----CNSMLIG 351

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y ++G   EA   F+    F                               G   ++IT 
Sbjct: 352 YAQHGLGKEAAQQFDEMIRF-------------------------------GIEPNDITF 380

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + + AC    +L +GK       K   E  +   + I+D+  + G +  A+S   ++P 
Sbjct: 381 LSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPI 440

Query: 556 PDDVA-WTTMI 565
              VA W  ++
Sbjct: 441 EPTVAIWGALL 451


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 245/825 (29%), Positives = 381/825 (46%), Gaps = 146/825 (17%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + TVH + +  G     ++   L+++Y K   +  A  LFD +++ D+V    ++ A++ 
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 238 NG---FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
            G      E+F                         + LG R                  
Sbjct: 94  AGNSNLAREIF-----------------------FATPLGIR------------------ 112

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-GTDNLNLGQQ 353
            + V +N  ++GY    D  GAIE F +++R+  + D+ TF   L A+A   ++    QQ
Sbjct: 113 -DTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQ 171

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           IH   +KSG      V N+L++++ K    C       + + +  A     E        
Sbjct: 172 IHCAVVKSGSGFVTSVLNALLSVFVK----CASSPLVSSSSLMAAARKLFDEM------- 220

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                   T  D    T +I  Y RNG +  A    +      +  WNAMI GY+     
Sbjct: 221 --------TERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS----GFELDLCV 529
            +ALE+F  M+  G + DE T  + + AC        GKQ+HAY +++      +  L V
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVA----------------------------- 560
           ++ +  +Y KCG + +A+ +FN +P  D V+                             
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392

Query: 561 --WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
             WT MISG   NG  + +L ++++M+  G  P ++ FA  + A + L AL  GRQ+HA 
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQ 452

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           L++L   S    G +L+ MYAKCG +E A+ LF  M   ++V WNAM+  L QHG+G + 
Sbjct: 453 LVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L+LFE M    + PD +TF+ VLS CS+ GLV E +  F  M   YGI P  +HY+ ++D
Sbjct: 513 LELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMID 572

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            L RAG+  EA ++I +MP E    +  ALL  CR+ G+ + G   AE+L  L P     
Sbjct: 573 LLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGT 632

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------DLIFAKVEGL 842
           YVLLSN++A   +WDDV   R  M+ K VKK+P                 D++  +V+ +
Sbjct: 633 YVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAV 692

Query: 843 IK-------RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-- 893
                    ++++ GY+PDT FVL D+E E+KE  L  HSEKLA  +GL+  P  + +  
Sbjct: 693 YNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRV 752

Query: 894 -------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                              +  +E +     RFHH ++G C C +
Sbjct: 753 FKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGN 797



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 202/471 (42%), Gaps = 114/471 (24%)

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN------------ 451
           P    +++ +H H I +      ++   LIDVYC++  +  A +LF+             
Sbjct: 28  PMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTL 87

Query: 452 -------------KDGF--------DLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
                        ++ F        D   +NAMI GY  +N+   A+ELF  +  +G R 
Sbjct: 88  IAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRP 147

Query: 491 DEITIATAVKACGCLLM-LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG-------- 541
           D  T  + + A   ++   KQ +Q+H   +KSG      V + +L ++VKC         
Sbjct: 148 DNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSS 207

Query: 542 -AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL------------------------ 576
             M  A+ +F+++   D+++WTTMI+G V NGE D                         
Sbjct: 208 SLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYV 267

Query: 577 -------ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK------LD 623
                  AL ++ +M L G+  DEFT+  ++ A +       G+Q+HA +++      LD
Sbjct: 268 HHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLD 327

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA------------------- 664
            S    V  +L  +Y KCG +++A  +F QM +++ V WNA                   
Sbjct: 328 FSLS--VNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFE 385

Query: 665 ------------MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
                       M+ GLAQ+G GEE+LKLF  MK+ G EP    F G + AC++   +  
Sbjct: 386 EMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMH 445

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
             +  H    + G +  +   + L+    + G  + A  L L+MP+  S S
Sbjct: 446 GRQ-LHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS 495



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 40/252 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDR----FLTNNLMTMYSRCGSLVYARRLFDK 113
           S+L    +    L GK  HA IL +   P       + N L T+Y +CG +  AR++F++
Sbjct: 296 SVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQ 355

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL-------- 165
           MP +DL+SWN+IL+ Y      NA  + E    F  + E    T  + ++ L        
Sbjct: 356 MPVKDLVSWNAILSGYV-----NAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEE 410

Query: 166 -LKL---CLSSGY--------------VWASETVHGYALKIGLVWDEFVS-----GALVN 202
            LKL     S G+               W +  +HG  L   LV   F S      AL+ 
Sbjct: 411 SLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALIT 470

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y+K G +  A  LF  M   D V W  M+ A  ++G G +   LF  + +  + PD  +
Sbjct: 471 MYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRIT 530

Query: 263 VQCVLGVISDLG 274
              VL   S  G
Sbjct: 531 FLTVLSTCSHAG 542



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 136/657 (20%), Positives = 224/657 (34%), Gaps = 220/657 (33%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM--PD------------ 116
           + ++ HA ++ S   P  ++ N L+ +Y +   LV A  LFD++  PD            
Sbjct: 33  IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92

Query: 117 -------------------RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL------R 151
                              RD + +N+++  Y+H+ +G          LFR L       
Sbjct: 93  SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFG-----AIELFRDLLRNGFRP 147

Query: 152 ESITFTSRLTLAPLL----KLCLS---------SGYVW---------------------- 176
           ++ TFTS L    L+    K C           SG+V                       
Sbjct: 148 DNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSS 207

Query: 177 -----ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                A +       +  L W   ++G     Y + G++  A+   DGM E+ VV W  M
Sbjct: 208 SLMAAARKLFDEMTERDELSWTTMIAG-----YVRNGELDAARQFLDGMTEKLVVAWNAM 262

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK--- 287
           +  Y  +GF  E   +F  ++  G+  D+ +   VL   ++ G   H +QV AY ++   
Sbjct: 263 ISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEP 322

Query: 288 -----LLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIE 318
                  L  NN+                        ++V WN  LSGY+  G    A  
Sbjct: 323 RPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKS 382

Query: 319 CFVNMIRSNVQYDSV-------------------------------TFLVALAAVAGTDN 347
            F  M   N+   +V                                F  A+ A A    
Sbjct: 383 FFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAA 442

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           L  G+Q+H   ++ GF S++  GN+LI MY+K G V        T+  +           
Sbjct: 443 LMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL----------- 491

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
                            DS    A+I    ++G  A+A  LFE            M+   
Sbjct: 492 -----------------DSVSWNAMIAALGQHGHGAQALELFE-----------LMLKED 523

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           IL                     D IT  T +  C    ++++G   H Y         +
Sbjct: 524 ILP--------------------DRITFLTVLSTCSHAGLVEEG---HRYFKSMSGLYGI 560

Query: 528 CVS----SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALS 579
           C      + ++D+  + G   +A+ +   +P  P    W  +++GC  +G  DL + 
Sbjct: 561 CPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQ 617


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 235/773 (30%), Positives = 377/773 (48%), Gaps = 107/773 (13%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           ++  YS  G I  A  LFDGM + DVV W  ++  Y + G  +E   LFV++ R G+ PD
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190

Query: 260 DESVQCVLGVISDLGKRHEE-----QVQAYAIKLLLYNN--------------------- 293
             +   +L   S L    EE     QV A A+K  L  +                     
Sbjct: 191 RTTFAVLLKSCSAL----EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 246

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                    N V W   ++G +Q       +E F+ M R  +     ++  A  + A   
Sbjct: 247 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 306

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD----------------- 389
            LN G+Q+H   +K+ F S  +VG +++++Y+K   +   R                   
Sbjct: 307 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 366

Query: 390 ---------------QFTLASVLR----------ASSSLPEGLHLSKQIHVHAIKNDTVA 424
                          QF + S +R          ++ +  +G    +Q+H  AIK+    
Sbjct: 367 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 426

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSH 482
           D  V+ A++D+Y +  ++ EA  +F+     D  +WNA+I    L  N H    +  F+ 
Sbjct: 427 DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAA--LEQNGHYDDTILHFNE 484

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G + D+ T  + +KAC  L  L+ G  +H   +KSG   D  V+S ++DMY KCG 
Sbjct: 485 MLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGI 544

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + +AQ + + I     V+W  ++SG   N E + A   + +M   G+ PD FTFA ++  
Sbjct: 545 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 604

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + L  +E G+QIH  +IK +   D ++  +LVDMYAKCG++ D+ ++F++++ R+ V W
Sbjct: 605 CANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSW 664

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NAM+ G A HG G E L++FE M+   V P+  TF+ VL ACS+ GL  +    FHLM  
Sbjct: 665 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 724

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            Y +EP++EH++ +VD LGR+   +EA + I SMPF+A A + + LL  C+++ D E  +
Sbjct: 725 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 784

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------- 831
             A  ++ L+P DSS Y+LLSN++A + +W DV+  R  +K+  +KK+P           
Sbjct: 785 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEM 844

Query: 832 ------------ADLIFAKVEGLIKRIKEGGYVPDT-DFVLLDVEEEEKERAL 871
                       +  ++  +  LI  +K  GY PD+  FV +D E    E  L
Sbjct: 845 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCL 897



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/560 (30%), Positives = 265/560 (47%), Gaps = 85/560 (15%)

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G V   FVS  L+ +Y++      A+ +FD M  RD V W  ML AY+  G       LF
Sbjct: 89  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +      PD                                    +VV WN  +SGY 
Sbjct: 149 DGM------PD-----------------------------------PDVVSWNALVSGYC 167

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G    +++ FV M R  V  D  TF V L + +  + L+LG Q+H   +K+G    V 
Sbjct: 168 QRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVR 227

Query: 369 VGNSLINMYSK--------------------------MGCV-----------------CG 385
            G++L++MY K                           GCV                  G
Sbjct: 228 TGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLG 287

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L   Q + AS  R+ +++   L+  +Q+H HAIKN   +D  V TA++DVY +  S+ +A
Sbjct: 288 LGVSQPSYASAFRSCAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 346

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              F       + T NAM+ G + +    +A+ LF  M  S  R D ++++    AC   
Sbjct: 347 RRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 406

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
               QG+Q+H  A+KSGF++D+CV++ +LD+Y KC A+++A  IF  +   D V+W  +I
Sbjct: 407 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAII 466

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +    NG  D  +  +++M   G+ PD+FT+  ++KA + L +LE G  +H  +IK    
Sbjct: 467 AALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG 526

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           SD FV  ++VDMY KCG I++A  L  ++  +  V WNA+L G + +   EE  K F +M
Sbjct: 527 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 586

Query: 686 KAHGVEPDSVTFIGVLSACS 705
              G++PD  TF  VL  C+
Sbjct: 587 LDMGLKPDHFTFATVLDTCA 606



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 178/655 (27%), Positives = 287/655 (43%), Gaps = 92/655 (14%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++T YS  G +  A  LFD MPD D++SWN++++ Y   G        E   LF  + 
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG-----MFQESVDLFVEMA 183

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                  R T A LLK C +   +     VH  A+K GL  D     ALV++Y K   + 
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCV 266
           +A   F GM ER+ V W   +    +N        LF+++ R GL     S       C 
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNN----------------------------NSNVV 298
                + G+    Q+ A+AIK    ++                            N  V 
Sbjct: 304 AMSCLNTGR----QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 359

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
             N  + G ++ G    A+  F  MIRS++++D V+     +A A T     GQQ+H   
Sbjct: 360 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 419

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVC---------------------------------- 384
           +KSGF   + V N+++++Y K   +                                   
Sbjct: 420 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 479

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G++ D FT  SVL+A ++L   L     +H   IK+   +D+FV++ ++D+
Sbjct: 480 LHFNEMLRFGMKPDDFTYGSVLKACAAL-RSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 538

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           YC+ G + EA+ L +   G  + +WNA++ G+ L+  S +A + FS M   G + D  T 
Sbjct: 539 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 598

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           AT +  C  L  ++ GKQ+H   +K     D  +SS ++DMY KCG M D+  +F  +  
Sbjct: 599 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 658

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQ 614
            D V+W  MI G   +G    AL ++ +M+   VVP+  TF  +++A S +   + G R 
Sbjct: 659 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 718

Query: 615 IH--ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
            H      KL+   + F    +VD+  +    ++A      M  + + V+W  +L
Sbjct: 719 FHLMTTHYKLEPQLEHFA--CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 771



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 177/757 (23%), Positives = 290/757 (38%), Gaps = 132/757 (17%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  S+  F++ +    S   + +  +L+   +  +L LG   HA  + +    D    + 
Sbjct: 172 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 231

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY +C SL  A   F  MP+R+ +SW + +A    +     E    G  LF  ++  
Sbjct: 232 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQN-----EQYVRGLELFIEMQRL 286

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               S+ + A   + C +   +     +H +A+K     D  V  A+V++Y+K   + +A
Sbjct: 287 GLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 346

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           +  F G+    V     M+      G G E   LF  + RS +  D  S+  V    ++ 
Sbjct: 347 RRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 406

Query: 274 -GKRHEEQVQAYAIK-------------LLLYN---------------NNSNVVLWNKKL 304
            G    +QV   AIK             L LY                   + V WN  +
Sbjct: 407 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAII 466

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +   Q G     I  F  M+R  ++ D  T+   L A A   +L  G  +H   +KSG  
Sbjct: 467 AALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG 526

Query: 365 SAVIVGNSLINMYSKMGCV----------------------------------------- 383
           S   V +++++MY K G +                                         
Sbjct: 527 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 586

Query: 384 --CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
              GL+ D FT A+VL   ++L   + L KQIH   IK + + D ++S+ L+D+Y + G 
Sbjct: 587 LDMGLKPDHFTFATVLDTCANLAT-IELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGD 645

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M ++  +FE  +  D  +WNAMI GY L     +AL +F  M       +  T    ++A
Sbjct: 646 MPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRA 705

Query: 502 CGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
           C  + +   G +  H        E  L   + ++D+  +     +A    N +P   D V
Sbjct: 706 CSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV 765

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            W T++S C    + ++A                                       +N+
Sbjct: 766 IWKTLLSICKIRQDVEIA-----------------------------------ELAASNV 790

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIED---AYILFKQMDMRNT--VLW-------NAMLV 667
           + LD   D  V I L ++YA+ G   D      L KQ  ++      W       +  LV
Sbjct: 791 LLLD-PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLV 849

Query: 668 GLAQHGNGEETLKLFED----MKAHGVEPDSVTFIGV 700
           G   H    E  ++  D    MK  G EPDS +F+ V
Sbjct: 850 GDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 886



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           + DTV+ + + TA    Y   G ++ A  LF+     D+ +WNA++ GY       ++++
Sbjct: 122 RRDTVSWNTMLTA----YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 177

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M   G   D  T A  +K+C  L  L  G Q+HA A+K+G E+D+   S ++DMY 
Sbjct: 178 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 237

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC ++ DA   F  +P  + V+W   I+GCV N +    L ++ +M+  G+   + ++A 
Sbjct: 238 KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYAS 297

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
             ++ + ++ L  GRQ+HA+ IK   SSD  VG ++VD+YAK  ++ DA   F  +    
Sbjct: 298 AFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 357

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
               NAM+VGL + G G E + LF+ M    +  D V+  GV SAC+ T    +  +  H
Sbjct: 358 VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG-QQVH 416

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            +  K G + ++   + ++D  G+     EA  +   M  + S S + A++ A    G
Sbjct: 417 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWN-AIIAALEQNG 473


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 207/576 (35%), Positives = 318/576 (55%), Gaps = 47/576 (8%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            DQ T A  L++ S +   L + + +  +A+K   VAD FV ++LI +Y   G +A A  
Sbjct: 118 ADQHTAACALKSCSRMC-ALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARL 176

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+  +   +  WNA++  Y+ + +  + +E+F  M   G   DE+T+ + V ACG +  
Sbjct: 177 VFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGD 236

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            K GK +  +  + G   +  + + ++DMY KCG +  A+ +F+ + + D VAW+ MISG
Sbjct: 237 AKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISG 296

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
                +   AL ++ +M+L+ V P++ T   ++ A + L ALE G+ +H+ + +   S  
Sbjct: 297 YTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLT 356

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +G +LVD YAKCG I+DA   F+ M ++N+  W A++ G+A +G G E L+LF  M+ 
Sbjct: 357 TILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRE 416

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G+EP  VTFIGVL ACS++ LV E   +F  M   YGI+P VEHY  +VD LGRAG   
Sbjct: 417 AGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVD 476

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA + I +MP E +A + RALL +C V  +   G+   +++++L P  S  YVLLSNI+A
Sbjct: 477 EAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYA 536

Query: 808 AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
           +A QW D    R EMK + ++K P                          I+ KVE +I 
Sbjct: 537 SAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIG 596

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----------- 893
           RIK  GYVP+T  V L+VEE EKE ++ +HSEKLA A+GL+   P + I           
Sbjct: 597 RIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCAD 656

Query: 894 ----------LSNKEPLYANR--FHHLRDGMCPCAD 917
                     + ++E +  +R  FHH +DG C C D
Sbjct: 657 CHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCND 692



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 207/517 (40%), Gaps = 112/517 (21%)

Query: 104 LVYARRLFDKMPDRDLIS--WNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSR 159
           L YA  LF   P   L +  +N ++ A+ H+G     +  +   LF  +    S     +
Sbjct: 66  LPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAG-----HPEDALHLFIEMLHAASACPADQ 120

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T A  LK C     +     V  YA+K GLV D FV  +L+++Y+  G +  A+ +FD 
Sbjct: 121 HTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDA 180

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISD--LG 274
            +E  VV+W  ++ AY +NG   EV  +F  +   G+  D+ ++  V+   G I D  LG
Sbjct: 181 AEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLG 240

Query: 275 K------------RHEEQVQAY------------AIKLLLYNNNSNVVLWNKKLSGYLQV 310
           K            R+ + V A             A +L     + +VV W+  +SGY Q 
Sbjct: 241 KWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQA 300

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
                A+  F  M  + V+ + VT +  L+A A    L  G+ +H    +       I+G
Sbjct: 301 DQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG 360

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
            +L++ Y+K GC+             + A  S+P                  V +S+  T
Sbjct: 361 TALVDFYAKCGCI----------DDAVEAFESMP------------------VKNSWTWT 392

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ALI     NG                                  +ALELFS M  +G   
Sbjct: 393 ALIKGMATNG-------------------------------RGREALELFSSMREAGIEP 421

Query: 491 DEITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            ++T    + AC    ++++G++        Y +K   E   C    ++D+  + G + +
Sbjct: 422 TDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGC----MVDLLGRAGLVDE 477

Query: 546 AQSIFNDIP-APDDVAWTTMISGC-----VDNGEEDL 576
           A      +P  P+ V W  ++S C     V  GEE L
Sbjct: 478 AYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL 514



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 36/332 (10%)

Query: 41  FLQKSHFSSSSSSSQWFSI--LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMY 98
           F++  H +S+  + Q  +   L+       L +G+   A  +    + DRF+ ++L+ MY
Sbjct: 106 FIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMY 165

Query: 99  SRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS 158
           + CG +  AR +FD   +  ++ WN+I+AAY  +G+       E   +F+ + E      
Sbjct: 166 ASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDW-----MEVVEMFKGMLEVGVAFD 220

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
            +TL  ++  C   G     + V G+  + GL  +  +  AL+++Y+K G+I +A+ LFD
Sbjct: 221 EVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFD 280

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           GMQ RDVV W  M+  Y +     E   LF ++  + + P+D ++  VL   + LG    
Sbjct: 281 GMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALET 340

Query: 279 EQ-VQAY----------------------------AIKLLLYNNNSNVVLWNKKLSGYLQ 309
            + V +Y                            A++        N   W   + G   
Sbjct: 341 GKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMAT 400

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
            G    A+E F +M  + ++   VTF+  L A
Sbjct: 401 NGRGREALELFSSMREAGIEPTDVTFIGVLMA 432



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 23/293 (7%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D  LGK     +       +  L   LM MY++CG +  ARRLFD M  RD+++W+++++
Sbjct: 236 DAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMIS 295

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y       A+   E   LF  ++ +    + +T+  +L  C   G +   + VH Y  +
Sbjct: 296 GYTQ-----ADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRR 350

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             L     +  ALV+ Y+K G I +A   F+ M  ++   W  +++  A NG G E   L
Sbjct: 351 KRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALEL 410

Query: 248 FVDLHRSGLCPDDES-----VQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWN 301
           F  +  +G+ P D +     + C    + + G+RH +   + Y IK  + +    V L  
Sbjct: 411 FSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLG 470

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +            G ++     IR+  ++ ++V +   L++ A   N+ +G++
Sbjct: 471 RA-----------GLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEE 512



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 176/431 (40%), Gaps = 68/431 (15%)

Query: 513 QMHAYAMKSGFELDLCVSS--GILDMYVKCGAMVD-AQSIFNDIPAP--DDVAWTTMISG 567
           Q+HA  +KSG EL     S   +L+       ++  A S+F   P P      +  ++  
Sbjct: 34  QLHAALIKSG-ELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRA 92

Query: 568 CVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            +  G  + AL ++ +M    S    D+ T A  +K+ S + AL+ GR + A  +K    
Sbjct: 93  FLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLV 152

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +D FV  SL+ MYA CG++  A ++F   +    V+WNA++    ++G+  E +++F+ M
Sbjct: 153 ADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGM 212

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVS-EAYENFHLMREKYGIEP---------------- 728
              GV  D VT + V++AC   G      +   H+  E     P                
Sbjct: 213 LEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEI 272

Query: 729 -------------EVEHYSFLVDALGRAGRTKEAGELILSMPF---EASASMHRALLGAC 772
                        +V  +S ++    +A + +EA  L   M     E +     ++L AC
Sbjct: 273 GKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSAC 332

Query: 773 RVQGDTETGKW----VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
            V G  ETGKW    V  K ++L     +A V   + +A     DD   A   M  KN  
Sbjct: 333 AVLGALETGKWVHSYVRRKRLSLTTILGTALV---DFYAKCGCIDDAVEAFESMPVKNSW 389

Query: 829 KDPADLIFAKVEG-------LIKRIKEGGYVPDTDFVLLDVEE--------EEKERALYY 873
              A +      G       L   ++E G  P TD   + V          EE  R    
Sbjct: 390 TWTALIKGMATNGRGREALELFSSMREAGIEP-TDVTFIGVLMACSHSCLVEEGRR---- 444

Query: 874 HSEKLARAYGL 884
           H + +AR YG+
Sbjct: 445 HFDSMARDYGI 455



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 10/202 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L  GK  H+ +          L   L+  Y++CG +  A   F+ MP +
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +  +W +++   A +G G      E   LF S+RE+    + +T   +L  C  S  V  
Sbjct: 387 NSWTWTALIKGMATNGRGR-----EALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEE 441

Query: 178 SET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAY 235
                   A   G+       G +V++  + G + EA +F+     E + V+W+ +L + 
Sbjct: 442 GRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSC 501

Query: 236 AEN---GFGEEVFHLFVDLHRS 254
           A +   G GEE     + L+ S
Sbjct: 502 AVHRNVGIGEEALKQIISLNPS 523


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 218/677 (32%), Positives = 339/677 (50%), Gaps = 91/677 (13%)

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------- 381
           D+ T    +   A T  LN G+Q+H   ++ G      + N  +N+YSK G         
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 382 -----------------------------CVCGLRTD-----QFTLASVLRASSSLPEGL 407
                                          C +R +     QF L+SVL+A +SL   +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG-AI 192

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
               Q+H   +K     + FV + L D+Y + G +++A   FE     D   W +MI G+
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           + + +  KAL  +  M T    +D+  + + + AC  L     GK +HA  +K GFE + 
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312

Query: 528 CVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
            + + + DMY K G MV A ++F         V+ T +I G V+  + + ALS +  +R 
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
            G+ P+EFTF  L+KA +    LE G Q+H  ++K +   DPFV  +LVDMY KCG  + 
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDH 432

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           +  LF +++  + + WN ++   +QHG G   ++ F  M   G++P++VTF+ +L  CS+
Sbjct: 433 SIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSH 492

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            G+V +    F  M + YG+ P+ EHYS ++D LGRAG+ KEA + I +MPFE +     
Sbjct: 493 AGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWC 552

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
           + LGAC++ GD E  K+ A+KLM LEP +S A+VLLSNI+A   QW+DV S R  +K  N
Sbjct: 553 SFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGN 612

Query: 827 VKKDPA----DL-------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVE 863
           + K P     D+                   I+ K++ L+ +IK  GYVP T+ VL+D++
Sbjct: 613 MNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMD 672

Query: 864 EEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA--------------------- 902
           +  KE+ L+YHSE++A A+ L++ P    I+  K                          
Sbjct: 673 DNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVR 732

Query: 903 --NRFHHLRDGMCPCAD 917
             +RFHH  +G C C D
Sbjct: 733 DISRFHHFSNGSCSCGD 749



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 183/358 (51%), Gaps = 3/358 (0%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           +D  T+A +++  +   E L+  KQ+H   I+   + ++F+S   +++Y + G +     
Sbjct: 73  SDTKTVAHLIQTYARTKE-LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LF+     ++ +W ++I G+  ++   +AL  F  M   GE   +  +++ ++AC  L  
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           ++ G Q+H   +K GF  +L V S + DMY KCG + DA   F ++P  D V WT+MI G
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            V NG+   AL+ Y +M    V  D+      + A S L A   G+ +HA ++KL    +
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE 311

Query: 628 PFVGISLVDMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
            F+G +L DMY+K G++  A  +F+   D  + V   A++ G  +    E+ L  F D++
Sbjct: 312 TFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             G+EP+  TF  ++ AC+    + E     H    K+  + +    S LVD  G+ G
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKL-EHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCG 428



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/549 (22%), Positives = 225/549 (40%), Gaps = 106/549 (19%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           T +L  GK  HA ++    +P+ FL+N+ + +YS+CG L Y  +LFDKM  R+++SW SI
Sbjct: 88  TKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSI 147

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +  +AH+         E    F  +R      ++  L+ +L+ C S G +     VH   
Sbjct: 148 ITGFAHNSR-----FQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLV 202

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   + FV   L ++YSK G++ +A   F+ M  +D VLW  M+  + +NG  ++  
Sbjct: 203 VKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKAL 262

Query: 246 ---------HLFVD----------------------LHRSGLCPDDESVQCVLGVISDLG 274
                     +F+D                      LH + L    E    +   ++D+ 
Sbjct: 263 TAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMY 322

Query: 275 KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
            +  + V A  +   ++++  ++V     + GY+++     A+  FV++ R  ++ +  T
Sbjct: 323 SKSGDMVSASNV-FQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFT 381

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
           F   + A A    L  G Q+HG  +K  F     V ++L++MY K    CGL      L 
Sbjct: 382 FTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGK----CGLFDHSIQL- 436

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
                                  I+N    D      L+ V+ ++G              
Sbjct: 437 --------------------FDEIEN---PDEIAWNTLVGVFSQHG-------------- 459

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                         L  N   A+E F+ M   G + + +T    +K C    M++ G   
Sbjct: 460 --------------LGRN---AIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 502

Query: 515 HA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            +     Y +    E   CV    +D+  + G + +A+   N++P  P+   W + +  C
Sbjct: 503 FSSMEKIYGVVPKEEHYSCV----IDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGAC 558

Query: 569 VDNGEEDLA 577
             +G+ + A
Sbjct: 559 KIHGDMERA 567



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 164/396 (41%), Gaps = 55/396 (13%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSS-----------SQWF--SILRHAISTSDL 69
           F K + RN+ S++  +  F   S F  + SS           +Q+   S+L+   S   +
Sbjct: 133 FDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             G   H  ++      + F+ +NL  MYS+CG L  A + F++MP +D + W S++  +
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             +G+       +    +  +     F  +  L   L  C +       +++H   LK+G
Sbjct: 253 VKNGD-----FKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLG 307

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLF 248
             ++ F+  AL ++YSK G +  A  +F    +   +V    ++  Y E    E+    F
Sbjct: 308 FEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTF 367

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQA------------------------ 283
           VDL R G+ P++ +   ++   ++  K  H  Q+                          
Sbjct: 368 VDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKC 427

Query: 284 ----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
               ++I+L     N + + WN  +  + Q G    AIE F  MI   ++ ++VTF+  L
Sbjct: 428 GLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLL 487

Query: 340 AAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
              +       G +  +  ++I+G   K   YS VI
Sbjct: 488 KGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVI 523



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 11/186 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+++   + + L  G   H +++  +   D F+++ L+ MY +CG   ++ +LFD++ + 
Sbjct: 384 SLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENP 443

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFR--LFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D I+WN+++  ++  G G   N  E F   + R L+      + +T   LLK C  +G V
Sbjct: 444 DEIAWNTLVGVFSQHGLG--RNAIETFNGMIHRGLK-----PNAVTFVNLLKGCSHAGMV 496

Query: 176 WASETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLR 233
                      KI G+V  E     ++++  + GK++EA+   + M  E +V  W   L 
Sbjct: 497 EDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLG 556

Query: 234 AYAENG 239
           A   +G
Sbjct: 557 ACKIHG 562


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 222/710 (31%), Positives = 354/710 (49%), Gaps = 91/710 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V W   + GYLQ   +  A   + +M R  ++ D VT +  L+     +  N+  QIH  
Sbjct: 106 VSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTH 165

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
            +K G+   ++V NSL++ Y K  C+                                  
Sbjct: 166 VIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEA 225

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G++   FT A++L A+  L +     +Q+H   +K + V + FV  AL+D
Sbjct: 226 IELFLELHNSGIKPSDFTFAALLSAAVGL-DDTKFGQQVHGFVLKTNFVWNVFVGNALLD 284

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
            Y ++  + E   LF      D  ++N +I  Y  +    ++ +LF  +  +     +  
Sbjct: 285 YYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            AT +      L L+ G+Q+H  A+  G   +  V + ++DMY KC    +AQ IF++I 
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V WT MIS  V  G+ +  ++++  MR +GV  D+ TFA +++A + L ++  GRQ
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H+ LI+    S+ + G +L+D YAKCG + DA   F +M  RN+V WNA++   AQ+GN
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN 524

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            + TL  F+ M   G +PDSV+F+ VLSACS+ G V EA  +F+ M + Y + P+ EHY+
Sbjct: 525 VDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYT 584

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD L R GR  EA +L+  MPFE S  M  ++L +CR+  + E  K  A++L  +E  
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644

Query: 795 -DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------- 832
            D++ Y+ +SNI+A A QWD+V   +  M+ + V+K PA                     
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHP 704

Query: 833 --DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
               I  K+  L K +++ GY PDT   L DV+E  K  +L YHSE+ A A+ L++TP  
Sbjct: 705 EMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDG 764

Query: 891 S--VILSN-------------------KEPLY--ANRFHHLRDGMCPCAD 917
           S  V++ N                   +E +   ++RFHH +DG+C C D
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGD 814



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 258/552 (46%), Gaps = 77/552 (13%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +++ + KFGK+ +A+ LFDGM ER  V W +++  Y ++   +E F L+ D+ R G+ PD
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139

Query: 260 DESVQCVLGVISDLGKRHE-EQVQAYAIKL-----LLYNN-------------------- 293
             ++  +L    +L  ++   Q+  + IKL     L+  N                    
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 294 ---NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
              N + V +N  ++GY   G N  AIE F+ +  S ++    TF   L+A  G D+   
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------MGCVCGL----------- 386
           GQQ+HG  LK+ F   V VGN+L++ YSK             M  + G+           
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319

Query: 387 -----------------RTD--QFTLASVLR-ASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                            R D  QF  A++L  A+SSL   L + +QIH  AI      +S
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSL--NLRMGRQIHCQAITVGANFES 377

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
            V  AL+D+Y +     EA+ +F+N        W AMI  Y+      + + +FS M  +
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G   D+ T A+ ++AC  L  +  G+Q+H+  ++SGF  ++   S +LD Y KCG M DA
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
              F ++P  + V+W  +IS    NG  D  L+ + QM  SG  PD  +F  ++ A S  
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557

Query: 607 TALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNA 664
             +E+      ++ ++ + +       S+VD+  + G  ++A  L  +M    + ++W++
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 665 MLVGLAQHGNGE 676
           +L     H N E
Sbjct: 618 VLNSCRIHKNHE 629



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 218/520 (41%), Gaps = 97/520 (18%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N+L+  Y +   L  A +LF  M ++D +++NS++  Y  S EG  E   E   LF  
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGY--SNEGLNE---EAIELFLE 231

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L  S    S  T A LL   +        + VHG+ LK   VW+ FV  AL++ YSK  +
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + E   LF  M E D + + V++ +YA NG  +E F LF  L  +           +L +
Sbjct: 292 VDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351

Query: 270 -ISDLGKRHEEQVQAYAIKL--------------------------LLYNNNS--NVVLW 300
             S L  R   Q+   AI +                           +++N +  + V W
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW 411

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +S Y+Q G +   I  F +M R+ V  D  TF   L A A   +++LG+Q+H   ++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           SGF S V  G++L++ Y+K GC          +   +++   +PE               
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGC----------MTDAIKSFGEMPE--------------- 506

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               +S    ALI  Y +NG          N DG                      L  F
Sbjct: 507 ---RNSVSWNALISAYAQNG----------NVDG---------------------TLNSF 532

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYV 538
             M  SG + D ++  + + AC     +++    H  +M   +E+       + ++D+  
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEA-LWHFNSMTQIYEVTPKREHYTSMVDVLC 591

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           + G   +A+ +  ++P  P ++ W+++++ C  +   +LA
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 178/370 (48%), Gaps = 3/370 (0%)

Query: 413 IHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           +H H + +   A + +S   +I  + + G +++A  LF+        +W  +I GY+ SN
Sbjct: 60  VHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSN 119

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
            S +A  L++ M   G   D +T+ T +   G L       Q+H + +K G+E +L V +
Sbjct: 120 QSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCN 179

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++D Y K   +  A  +F  +   D V + ++++G  + G  + A+ ++ ++  SG+ P
Sbjct: 180 SLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKP 239

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
            +FTFA L+ A+  L   + G+Q+H  ++K +   + FVG +L+D Y+K   +++   LF
Sbjct: 240 SDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLF 299

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   + + +N ++   A +G  +E+  LF  ++    +     F  +LS  + + L  
Sbjct: 300 XEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT-SSLNL 358

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
                 H      G   E    + LVD   +    KEA ++  ++  +++     A++ A
Sbjct: 359 RMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW-TAMISA 417

Query: 772 CRVQGDTETG 781
              +G  E G
Sbjct: 418 YVQKGKHEEG 427



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 41/364 (11%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FL+  +     S   + ++L  A+   D   G+  H  +L ++ + + F+ N L+  YS+
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
              +    +LF +MP+ D IS+N ++ +YA +G+       E F LFR L+ +     + 
Sbjct: 289 HDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQ-----FKESFDLFRKLQFTRFDRRQF 343

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
             A LL +  SS  +     +H  A+ +G  ++  V  ALV++Y+K    +EA+ +FD +
Sbjct: 344 PFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNI 403

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----- 275
             +  V W  M+ AY + G  EE  ++F D+ R+G+  D  +   +L   ++L       
Sbjct: 404 ACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGR 463

Query: 276 -------RHEEQVQAY-----------------AIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                  R       Y                 AIK        N V WN  +S Y Q G
Sbjct: 464 QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNG 523

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD-------NLNLGQQIHGTTLKSGFY 364
           +  G +  F  MI+S  + DSV+FL  L+A +          + N   QI+  T K   Y
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY 583

Query: 365 SAVI 368
           ++++
Sbjct: 584 TSMV 587



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 34/274 (12%)

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD----------------- 558
           A+ +K+GF  + C S+  ++ +++ G +V A  +F+ +PA +                  
Sbjct: 32  AHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLS 91

Query: 559 --------------VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                         V+WT +I G + + +   A  +Y  MR  G+ PD  T   L+    
Sbjct: 92  KARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L       QIH ++IKL    +  V  SLVD Y K   +  A  LFK M  ++TV +N+
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREK 723
           ++ G +  G  EE ++LF ++   G++P   TF  +LSA    GL    + +  H    K
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDDTKFGQQVHGFVLK 269

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
                 V   + L+D   +  +  E G+L   MP
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMP 303


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 209/590 (35%), Positives = 327/590 (55%), Gaps = 47/590 (7%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++++ +M  V  +  DQ T+A  L++ S +   L + + I  +A+K   +AD FV ++LI
Sbjct: 103 LHLFVEMLDVASVCPDQHTVACALKSCSRMCT-LDVGRGIQAYAVKRGLMADRFVLSSLI 161

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y     +A A+ LF+  +   +  WNA+I  Y+ + N  + +E+F  M   G   DEI
Sbjct: 162 HMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEI 221

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T+ + V ACG +   K GK +  Y  + G   +  + + ++DMY KCG +  A+ +F+ +
Sbjct: 222 TLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGM 281

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
            + D VAW+ MISG     +   AL+++ +M+L+ V P++ T   ++ A + L ALE G+
Sbjct: 282 QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGK 341

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            +H+ + +   S    +G +LVD YAKCG I+DA   F+ M ++N+  W A++ G+A +G
Sbjct: 342 WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 401

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
            G E L+LF  M+   +EP  VTFIGVL ACS++ LV E   +F  M + YGI+P  EHY
Sbjct: 402 RGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHY 461

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             +VD LGRAG   EA + I +MP E +A + RALL +C V  + E G+   +++++L P
Sbjct: 462 GCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNP 521

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------- 832
             S  Y+LLSNI+A+  QW +    R EMK + ++K P                      
Sbjct: 522 SHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHP 581

Query: 833 --DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
               I+ KVE +I RIK  GY+P+T  V L+V+E EKE ++ +HSEKLA A+GL+   P 
Sbjct: 582 QLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPG 641

Query: 891 SVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           + I                     + N+E +    NRFHH +DG C C D
Sbjct: 642 ATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCND 691



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 204/519 (39%), Gaps = 117/519 (22%)

Query: 104 LVYARRLFDKMPDRDLIS--WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RL 160
           L YA  LF   P   L +  +N ++ A  H+G        +   LF  + +  +    + 
Sbjct: 66  LPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPE-----DALHLFVEMLDVASVCPDQH 120

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+A  LK C     +     +  YA+K GL+ D FV  +L+++Y+    +  A+ LFD +
Sbjct: 121 TVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAV 180

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD---ESVQCVLGVISD--LGK 275
           +E  VV+W  ++ AY +NG   EV  +F  +   G+  D+    SV    G I D  LGK
Sbjct: 181 EENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGK 240

Query: 276 RHEEQVQAYAIKLLLYNNN---------------------------SNVVLWNKKLSGYL 308
              E V     K L+ N N                            +VV W+  +SGY 
Sbjct: 241 WVAEYVDE---KGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYT 297

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q      A+  F  M  + V+ + VT +  L+A A    L  G+ +H    +      +I
Sbjct: 298 QADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTII 357

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           +G +L++ Y+K GC+             + A  S+P                  V +S+ 
Sbjct: 358 LGTALVDFYAKCGCI----------DDAVEAFESMP------------------VKNSWT 389

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            TALI     NG                                  +ALELFS M  +  
Sbjct: 390 WTALIKGMATNG-------------------------------RGREALELFSSMRKASI 418

Query: 489 RLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
              ++T    + AC    ++++G++        Y +K   E   CV    +D+  + G +
Sbjct: 419 EPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCV----VDLLGRAGLI 474

Query: 544 VDAQSIFNDIP-APDDVAWTTMISGC-----VDNGEEDL 576
            +A      +P  P+ V W  ++S C     V+ GEE L
Sbjct: 475 DEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 148/336 (44%), Gaps = 41/336 (12%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L +G+   A  +    + DRF+ ++L+ MY+ C  +  A+ LFD + +  ++ WN+I+ A
Sbjct: 135 LDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITA 194

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +G     N  E   +F+ + E       +TL  ++  C   G     + V  Y  + 
Sbjct: 195 YMKNG-----NWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEK 249

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GLV +  +  AL+++Y+K G++ +A+ LFDGMQ RDVV W  M+  Y +     E   LF
Sbjct: 250 GLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALF 309

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAY----------------------- 284
            ++  + + P+D ++  VL   + LG     + V +Y                       
Sbjct: 310 SEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKC 369

Query: 285 -----AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                A++        N   W   + G    G    A+E F +M +++++   VTF+  L
Sbjct: 370 GCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVL 429

Query: 340 AAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
            A +       G  + +   Q +G   ++  Y  V+
Sbjct: 430 MACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVV 465



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 11/226 (4%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D  LGK     +     + +R L   L+ MY++CG L  ARRLFD M  RD+++W+++++
Sbjct: 235 DAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMIS 294

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y       A+   E   LF  ++ +    + +T+  +L  C   G +   + VH Y  +
Sbjct: 295 GYTQ-----ADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRR 349

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             L     +  ALV+ Y+K G I +A   F+ M  ++   W  +++  A NG G E   L
Sbjct: 350 KRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALEL 409

Query: 248 FVDLHRSGLCPDDES-----VQCVLGVISDLGKRH-EEQVQAYAIK 287
           F  + ++ + P D +     + C    + + G+RH +   Q Y IK
Sbjct: 410 FSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIK 455



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 156/357 (43%), Gaps = 47/357 (13%)

Query: 513 QMHAYAMKSGFEL---DLCVSSGILDMYVKCGAMVDAQSIFNDIPAP--DDVAWTTMISG 567
           Q+HA  +KSG EL     C  S +         +  A S+F   P P      +  ++  
Sbjct: 34  QLHAALIKSG-ELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRA 92

Query: 568 CVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
            +  G  + AL ++ +M  ++ V PD+ T A  +K+ S +  L+ GR I A  +K    +
Sbjct: 93  LLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMA 152

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D FV  SL+ MYA C ++  A +LF  ++    V+WNA++    ++GN  E +++F+ M 
Sbjct: 153 DRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGML 212

Query: 687 AHGVEPDSVTFIGVLSACSYTG------LVSEAYENFHLMREKYGIEPEVEHY------- 733
             GV  D +T + V++AC   G       V+E  +   L+R +  +   ++ Y       
Sbjct: 213 EVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELG 272

Query: 734 -----------------SFLVDALGRAGRTKEAGELILSMPF---EASASMHRALLGACR 773
                            S ++    +A + +EA  L   M     E +     ++L AC 
Sbjct: 273 KARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACA 332

Query: 774 VQGDTETGKWV----AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
           V G  ETGKWV      K ++L     +A V   + +A     DD   A   M  KN
Sbjct: 333 VLGALETGKWVHSYIRRKRLSLTIILGTALV---DFYAKCGCIDDAVEAFESMPVKN 386



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 10/202 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L  GK  H+ I          L   L+  Y++CG +  A   F+ MP +
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +  +W +++   A +G G      E   LF S+R++    + +T   +L  C  S  V  
Sbjct: 386 NSWTWTALIKGMATNGRGR-----EALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEE 440

Query: 178 SET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAY 235
                       G+       G +V++  + G I EA +F+     E + V+W+ +L + 
Sbjct: 441 GRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSC 500

Query: 236 AENG---FGEEVFHLFVDLHRS 254
           A +     GEE     V L+ S
Sbjct: 501 AVHKNVEIGEEALKQIVSLNPS 522


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 235/773 (30%), Positives = 377/773 (48%), Gaps = 107/773 (13%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           ++  YS  G I  A  LFDGM + DVV W  ++  Y + G  +E   LFV++ R G+ PD
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 260 DESVQCVLGVISDLGKRHEE-----QVQAYAIKLLLYNN--------------------- 293
             +   +L   S L    EE     QV A A+K  L  +                     
Sbjct: 149 RTTFAVLLKSCSAL----EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                    N V W   ++G +Q       +E F+ M R  +     ++  A  + A   
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD----------------- 389
            LN G+Q+H   +K+ F S  +VG +++++Y+K   +   R                   
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324

Query: 390 ---------------QFTLASVLR----------ASSSLPEGLHLSKQIHVHAIKNDTVA 424
                          QF + S +R          ++ +  +G    +Q+H  AIK+    
Sbjct: 325 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSH 482
           D  V+ A++D+Y +  ++ EA  +F+     D  +WNA+I    L  N H    +  F+ 
Sbjct: 385 DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAA--LEQNGHYDDTILHFNE 442

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G + D+ T  + +KAC  L  L+ G  +H   +KSG   D  V+S ++DMY KCG 
Sbjct: 443 MLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGI 502

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + +AQ + + I     V+W  ++SG   N E + A   + +M   G+ PD FTFA ++  
Sbjct: 503 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 562

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + L  +E G+QIH  +IK +   D ++  +LVDMYAKCG++ D+ ++F++++ R+ V W
Sbjct: 563 CANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSW 622

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NAM+ G A HG G E L++FE M+   V P+  TF+ VL ACS+ GL  +    FHLM  
Sbjct: 623 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 682

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            Y +EP++EH++ +VD LGR+   +EA + I SMPF+A A + + LL  C+++ D E  +
Sbjct: 683 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 742

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------- 831
             A  ++ L+P DSS Y+LLSN++A + +W DV+  R  +K+  +KK+P           
Sbjct: 743 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEM 802

Query: 832 ------------ADLIFAKVEGLIKRIKEGGYVPDT-DFVLLDVEEEEKERAL 871
                       +  ++  +  LI  +K  GY PD+  FV +D E    E  L
Sbjct: 803 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCL 855



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 173/560 (30%), Positives = 266/560 (47%), Gaps = 85/560 (15%)

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G V + FVS  L+ +Y++      A+ +FD M  RD V W  ML AY+  G       LF
Sbjct: 47  GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +      PD                                    +VV WN  +SGY 
Sbjct: 107 DGM------PD-----------------------------------PDVVSWNALVSGYC 125

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G    +++ FV M R  V  D  TF V L + +  + L+LG Q+H   +K+G    V 
Sbjct: 126 QRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVR 185

Query: 369 VGNSLINMYSK--------------------------MGCV-----------------CG 385
            G++L++MY K                           GCV                  G
Sbjct: 186 TGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLG 245

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L   Q + AS  R+ +++   L+  +Q+H HAIKN   +D  V TA++DVY +  S+ +A
Sbjct: 246 LGVSQPSYASAFRSCAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 304

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              F       + T NAM+ G + +    +A+ LF  M  S  R D ++++    AC   
Sbjct: 305 RRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 364

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
               QG+Q+H  A+KSGF++D+CV++ +LD+Y KC A+++A  IF  +   D V+W  +I
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAII 424

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +    NG  D  +  +++M   G+ PD+FT+  ++KA + L +LE G  +H  +IK    
Sbjct: 425 AALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG 484

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           SD FV  ++VDMY KCG I++A  L  ++  +  V WNA+L G + +   EE  K F +M
Sbjct: 485 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544

Query: 686 KAHGVEPDSVTFIGVLSACS 705
              G++PD  TF  VL  C+
Sbjct: 545 LDMGLKPDHFTFATVLDTCA 564



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 178/655 (27%), Positives = 287/655 (43%), Gaps = 92/655 (14%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++T YS  G +  A  LFD MPD D++SWN++++ Y   G        E   LF  + 
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG-----MFQESVDLFVEMA 141

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                  R T A LLK C +   +     VH  A+K GL  D     ALV++Y K   + 
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCV 266
           +A   F GM ER+ V W   +    +N        LF+++ R GL     S       C 
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNN----------------------------NSNVV 298
                + G+    Q+ A+AIK    ++                            N  V 
Sbjct: 262 AMSCLNTGR----QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
             N  + G ++ G    A+  F  MIRS++++D V+     +A A T     GQQ+H   
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVC---------------------------------- 384
           +KSGF   + V N+++++Y K   +                                   
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G++ D FT  SVL+A ++L   L     +H   IK+   +D+FV++ ++D+
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAAL-RSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 496

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           YC+ G + EA+ L +   G  + +WNA++ G+ L+  S +A + FS M   G + D  T 
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           AT +  C  L  ++ GKQ+H   +K     D  +SS ++DMY KCG M D+  +F  +  
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 616

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQ 614
            D V+W  MI G   +G    AL ++ +M+   VVP+  TF  +++A S +   + G R 
Sbjct: 617 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 676

Query: 615 IH--ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
            H      KL+   + F    +VD+  +    ++A      M  + + V+W  +L
Sbjct: 677 FHLMTTHYKLEPQLEHFA--CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 729



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 177/757 (23%), Positives = 290/757 (38%), Gaps = 132/757 (17%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  S+  F++ +    S   + +  +L+   +  +L LG   HA  + +    D    + 
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY +C SL  A   F  MP+R+ +SW + +A    +     E    G  LF  ++  
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQN-----EQYVRGLELFIEMQRL 244

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               S+ + A   + C +   +     +H +A+K     D  V  A+V++Y+K   + +A
Sbjct: 245 GLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 304

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           +  F G+    V     M+      G G E   LF  + RS +  D  S+  V    ++ 
Sbjct: 305 RRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 364

Query: 274 -GKRHEEQVQAYAIK-------------LLLYN---------------NNSNVVLWNKKL 304
            G    +QV   AIK             L LY                   + V WN  +
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAII 424

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +   Q G     I  F  M+R  ++ D  T+   L A A   +L  G  +H   +KSG  
Sbjct: 425 AALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG 484

Query: 365 SAVIVGNSLINMYSKMGCV----------------------------------------- 383
           S   V +++++MY K G +                                         
Sbjct: 485 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544

Query: 384 --CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
              GL+ D FT A+VL   ++L   + L KQIH   IK + + D ++S+ L+D+Y + G 
Sbjct: 545 LDMGLKPDHFTFATVLDTCANLAT-IELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGD 603

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M ++  +FE  +  D  +WNAMI GY L     +AL +F  M       +  T    ++A
Sbjct: 604 MPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRA 663

Query: 502 CGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
           C  + +   G +  H        E  L   + ++D+  +     +A    N +P   D V
Sbjct: 664 CSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV 723

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            W T++S C    + ++A                                       +N+
Sbjct: 724 IWKTLLSICKIRQDVEIA-----------------------------------ELAASNV 748

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIED---AYILFKQMDMRNT--VLW-------NAMLV 667
           + LD   D  V I L ++YA+ G   D      L KQ  ++      W       +  LV
Sbjct: 749 LLLD-PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLV 807

Query: 668 GLAQHGNGEETLKLFED----MKAHGVEPDSVTFIGV 700
           G   H    E  ++  D    MK  G EPDS +F+ V
Sbjct: 808 GDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 844



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           + DTV+ + + TA    Y   G ++ A  LF+     D+ +WNA++ GY       ++++
Sbjct: 80  RRDTVSWNTMLTA----YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 135

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M   G   D  T A  +K+C  L  L  G Q+HA A+K+G E+D+   S ++DMY 
Sbjct: 136 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC ++ DA   F  +P  + V+W   I+GCV N +    L ++ +M+  G+   + ++A 
Sbjct: 196 KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYAS 255

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
             ++ + ++ L  GRQ+HA+ IK   SSD  VG ++VD+YAK  ++ DA   F  +    
Sbjct: 256 AFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 315

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
               NAM+VGL + G G E + LF+ M    +  D V+  GV SAC+ T    +  +  H
Sbjct: 316 VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG-QQVH 374

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            +  K G + ++   + ++D  G+     EA  +   M  + S S + A++ A    G
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWN-AIIAALEQNG 431


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 235/773 (30%), Positives = 377/773 (48%), Gaps = 107/773 (13%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           ++  YS  G I  A  LFDGM + DVV W  ++  Y + G  +E   LFV++ R G+ PD
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 260 DESVQCVLGVISDLGKRHEE-----QVQAYAIKLLLYNN--------------------- 293
             +   +L   S L    EE     QV A A+K  L  +                     
Sbjct: 149 RTTFAVLLKSCSAL----EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                    N V W   ++G +Q       +E F+ M R  +     ++  A  + A   
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD----------------- 389
            LN G+Q+H   +K+ F S  +VG +++++Y+K   +   R                   
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324

Query: 390 ---------------QFTLASVLR----------ASSSLPEGLHLSKQIHVHAIKNDTVA 424
                          QF + S +R          ++ +  +G    +Q+H  AIK+    
Sbjct: 325 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSH 482
           D  V+ A++D+Y +  ++ EA  +F+     D  +WNA+I    L  N H    +  F+ 
Sbjct: 385 DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAA--LEQNGHYDDTILHFNE 442

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G + D+ T  + +KAC  L  L+ G  +H   +KSG   D  V+S ++DMY KCG 
Sbjct: 443 MLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGI 502

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + +AQ + + I     V+W  ++SG   N E + A   + +M   G+ PD FTFA ++  
Sbjct: 503 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 562

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + L  +E G+QIH  +IK +   D ++  +LVDMYAKCG++ D+ ++F++++ R+ V W
Sbjct: 563 CANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSW 622

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NAM+ G A HG G E L++FE M+   V P+  TF+ VL ACS+ GL  +    FHLM  
Sbjct: 623 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 682

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            Y +EP++EH++ +VD LGR+   +EA + I SMPF+A A + + LL  C+++ D E  +
Sbjct: 683 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 742

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------- 831
             A  ++ L+P DSS Y+LLSN++A + +W DV+  R  +K+  +KK+P           
Sbjct: 743 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEM 802

Query: 832 ------------ADLIFAKVEGLIKRIKEGGYVPDT-DFVLLDVEEEEKERAL 871
                       +  ++  +  LI  +K  GY PD+  FV +D E    E  L
Sbjct: 803 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCL 855



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/560 (30%), Positives = 265/560 (47%), Gaps = 85/560 (15%)

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G V   FVS  L+ +Y++      A+ +FD M  RD V W  ML AY+  G       LF
Sbjct: 47  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +      PD                                    +VV WN  +SGY 
Sbjct: 107 DGM------PD-----------------------------------PDVVSWNALVSGYC 125

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G    +++ FV M R  V  D  TF V L + +  + L+LG Q+H   +K+G    V 
Sbjct: 126 QRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVR 185

Query: 369 VGNSLINMYSK--------------------------MGCV-----------------CG 385
            G++L++MY K                           GCV                  G
Sbjct: 186 TGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLG 245

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L   Q + AS  R+ +++   L+  +Q+H HAIKN   +D  V TA++DVY +  S+ +A
Sbjct: 246 LGVSQPSYASAFRSCAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 304

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              F       + T NAM+ G + +    +A+ LF  M  S  R D ++++    AC   
Sbjct: 305 RRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 364

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
               QG+Q+H  A+KSGF++D+CV++ +LD+Y KC A+++A  IF  +   D V+W  +I
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAII 424

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +    NG  D  +  +++M   G+ PD+FT+  ++KA + L +LE G  +H  +IK    
Sbjct: 425 AALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG 484

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           SD FV  ++VDMY KCG I++A  L  ++  +  V WNA+L G + +   EE  K F +M
Sbjct: 485 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544

Query: 686 KAHGVEPDSVTFIGVLSACS 705
              G++PD  TF  VL  C+
Sbjct: 545 LDMGLKPDHFTFATVLDTCA 564



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 178/655 (27%), Positives = 287/655 (43%), Gaps = 92/655 (14%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++T YS  G +  A  LFD MPD D++SWN++++ Y   G        E   LF  + 
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG-----MFQESVDLFVEMA 141

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                  R T A LLK C +   +     VH  A+K GL  D     ALV++Y K   + 
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCV 266
           +A   F GM ER+ V W   +    +N        LF+++ R GL     S       C 
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNN----------------------------NSNVV 298
                + G+    Q+ A+AIK    ++                            N  V 
Sbjct: 262 AMSCLNTGR----QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
             N  + G ++ G    A+  F  MIRS++++D V+     +A A T     GQQ+H   
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVC---------------------------------- 384
           +KSGF   + V N+++++Y K   +                                   
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G++ D FT  SVL+A ++L   L     +H   IK+   +D+FV++ ++D+
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAAL-RSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 496

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           YC+ G + EA+ L +   G  + +WNA++ G+ L+  S +A + FS M   G + D  T 
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           AT +  C  L  ++ GKQ+H   +K     D  +SS ++DMY KCG M D+  +F  +  
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 616

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQ 614
            D V+W  MI G   +G    AL ++ +M+   VVP+  TF  +++A S +   + G R 
Sbjct: 617 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 676

Query: 615 IH--ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
            H      KL+   + F    +VD+  +    ++A      M  + + V+W  +L
Sbjct: 677 FHLMTTHYKLEPQLEHFA--CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 729



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 177/757 (23%), Positives = 290/757 (38%), Gaps = 132/757 (17%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  S+  F++ +    S   + +  +L+   +  +L LG   HA  + +    D    + 
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY +C SL  A   F  MP+R+ +SW + +A    +     E    G  LF  ++  
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQN-----EQYVRGLELFIEMQRL 244

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               S+ + A   + C +   +     +H +A+K     D  V  A+V++Y+K   + +A
Sbjct: 245 GLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 304

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           +  F G+    V     M+      G G E   LF  + RS +  D  S+  V    ++ 
Sbjct: 305 RRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 364

Query: 274 -GKRHEEQVQAYAIK-------------LLLYN---------------NNSNVVLWNKKL 304
            G    +QV   AIK             L LY                   + V WN  +
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAII 424

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +   Q G     I  F  M+R  ++ D  T+   L A A   +L  G  +H   +KSG  
Sbjct: 425 AALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG 484

Query: 365 SAVIVGNSLINMYSKMGCV----------------------------------------- 383
           S   V +++++MY K G +                                         
Sbjct: 485 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544

Query: 384 --CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
              GL+ D FT A+VL   ++L   + L KQIH   IK + + D ++S+ L+D+Y + G 
Sbjct: 545 LDMGLKPDHFTFATVLDTCANLAT-IELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGD 603

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M ++  +FE  +  D  +WNAMI GY L     +AL +F  M       +  T    ++A
Sbjct: 604 MPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRA 663

Query: 502 CGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
           C  + +   G +  H        E  L   + ++D+  +     +A    N +P   D V
Sbjct: 664 CSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV 723

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            W T++S C    + ++A                                       +N+
Sbjct: 724 IWKTLLSICKIRQDVEIA-----------------------------------ELAASNV 748

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIED---AYILFKQMDMRNT--VLW-------NAMLV 667
           + LD   D  V I L ++YA+ G   D      L KQ  ++      W       +  LV
Sbjct: 749 LLLD-PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLV 807

Query: 668 GLAQHGNGEETLKLFED----MKAHGVEPDSVTFIGV 700
           G   H    E  ++  D    MK  G EPDS +F+ V
Sbjct: 808 GDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 844



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           + DTV+ + + TA    Y   G ++ A  LF+     D+ +WNA++ GY       ++++
Sbjct: 80  RRDTVSWNTMLTA----YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 135

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M   G   D  T A  +K+C  L  L  G Q+HA A+K+G E+D+   S ++DMY 
Sbjct: 136 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC ++ DA   F  +P  + V+W   I+GCV N +    L ++ +M+  G+   + ++A 
Sbjct: 196 KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYAS 255

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
             ++ + ++ L  GRQ+HA+ IK   SSD  VG ++VD+YAK  ++ DA   F  +    
Sbjct: 256 AFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 315

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
               NAM+VGL + G G E + LF+ M    +  D V+  GV SAC+ T    +  +  H
Sbjct: 316 VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG-QQVH 374

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            +  K G + ++   + ++D  G+     EA  +   M  + S S + A++ A    G
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWN-AIIAALEQNG 431


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 230/686 (33%), Positives = 347/686 (50%), Gaps = 80/686 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN  L G+    D   A+E +V M+      +S +F   L + A
Sbjct: 16  YAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCA 75

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     G+QIH   LK G      V  SLI+MY++ G                      
Sbjct: 76  KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNG---------------------- 113

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
             GL  ++++   +   D V+     TALI  Y   G    A  +F+     D+ +WNAM
Sbjct: 114 --GLEDARKVFDASSHRDVVS----CTALITGYASRGDFRSARKVFDEITERDVVSWNAM 167

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-- 521
           I GY+ +    +ALELF  M  +  R DE T+ + V AC     ++ G+Q+H++      
Sbjct: 168 ITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDD 227

Query: 522 --GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             GF   L + + ++D+Y KCG +  A  +F  +   D V+W T+I G         AL 
Sbjct: 228 DHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALL 287

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDM 637
           ++ +M  SG  P++ T   ++ A + L A++ GR IH  + K     +++  +  SL+DM
Sbjct: 288 LFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDM 347

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           YAKCG+IE A+ +F  M  R+   WNAM+ G A HG       LF  M+ + VEPD +TF
Sbjct: 348 YAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITF 407

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +G+LSACS++GL+    + F  M + Y + P++EHY  ++D LG +G  KEA E+I +MP
Sbjct: 408 VGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP 467

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            E    +  +LL AC+  G+ E  +  A+KL+ +EP +S +YVLLSNI+A A +W+DV  
Sbjct: 468 MEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVAR 527

Query: 818 ARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPD 854
            RG +  K +KK P                          I+  +E +  +++E G+ PD
Sbjct: 528 VRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPD 587

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN---------------- 896
           T  VL ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                
Sbjct: 588 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 647

Query: 897 --KEPLYA---NRFHHLRDGMCPCAD 917
             K  + A    RFHH RDG+C C D
Sbjct: 648 IYKREIVARDRTRFHHFRDGVCSCCD 673



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 77/352 (21%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL-----VY-------------------- 106
           G+  HA++L      DR++  +L++MY+R G L     V+                    
Sbjct: 83  GRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYAS 142

Query: 107 ------ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
                 AR++FD++ +RD++SWN+++  Y  +G        E   LF+ +  +       
Sbjct: 143 RGDFRSARKVFDEITERDVVSWNAMITGYVENG-----RYEEALELFKEMMRTNVRPDEG 197

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKI----GLVWDEFVSGALVNIYSKFGKIREAKFL 216
           TL  ++  C  SG +     VH +        G      +  AL+++YSK G +  A  L
Sbjct: 198 TLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGL 257

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK- 275
           F+G+  +DVV W  ++  Y      +E   LF ++ RSG CP+D ++  VL   + LG  
Sbjct: 258 FEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAI 317

Query: 276 -----------------RHEEQVQAYAIKL----------------LLYNNNSNVVLWNK 302
                             +E  ++   I +                +LY + S+   WN 
Sbjct: 318 DIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS---WNA 374

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            + G+   G  + A + F  M  + V+ D +TF+  L+A + +  L+LG+QI
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 114/501 (22%), Positives = 199/501 (39%), Gaps = 122/501 (24%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L  +   F  +  A  +F+ +QE ++++W  MLR +A +        ++V +   G  P+
Sbjct: 4   LCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPN 63

Query: 260 DESVQCVLGVISDLGKRHEE--QVQAYAIKL-------------LLYNNNS--------- 295
             S   +L   +   K  EE  Q+ A  +KL              +Y  N          
Sbjct: 64  SYSFPFLLKSCAK-SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVF 122

Query: 296 ------NVVLWNKKLSGYLQVGDNHG-------------------------------AIE 318
                 +VV     ++GY   GD                                  A+E
Sbjct: 123 DASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALE 182

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG----TTLKSGFYSAVIVGNSLI 374
            F  M+R+NV+ D  T +  ++A A + ++ LG+Q+H          GF S++ + N+LI
Sbjct: 183 LFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALI 242

Query: 375 NMYSKMGCV-------------------------------------------CGLRTDQF 391
           ++YSK G V                                            G   +  
Sbjct: 243 DLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDV 302

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIK--NDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           TL SVL A + L   + + + IHV+  K       ++ + T+LID+Y + G +  A  +F
Sbjct: 303 TLLSVLPACAHLG-AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVF 361

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
            +     L++WNAMIFG+ +   ++ A +LFS M  +    D+IT    + AC    +L 
Sbjct: 362 NSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLD 421

Query: 510 QGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
            G+Q+       Y +    E   C    ++D+    G   +A+ + + +P  PD V W +
Sbjct: 422 LGRQIFKSMTQDYNLTPKLEHYGC----MIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCS 477

Query: 564 MISGCVDNGEEDLALSIYHQM 584
           ++  C  +G  +LA S   ++
Sbjct: 478 LLKACKKHGNLELAESFAQKL 498



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 71/344 (20%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + +L+ WN++L  +A S      +      ++  +       +  +  
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSS-----DPVSALEMYVRMVSLGHLPNSYSFP 68

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-- 221
            LLK C  S        +H   LK+G   D +V  +L+++Y++ G + +A+ +FD     
Sbjct: 69  FLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR 128

Query: 222 -----------------------------ERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
                                        ERDVV W  M+  Y ENG  EE   LF ++ 
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQV------QAYAIKLLLYN--------- 292
           R+ + PD+ ++  V+   +     +LG++    V        ++  L + N         
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248

Query: 293 -------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                        +  +VV WN  + GY        A+  F  M+RS    + VT L  L
Sbjct: 249 GDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVL 308

Query: 340 AAVAGTDNLNLGQQIHGTTLK--SGFYSAVIVGNSLINMYSKMG 381
            A A    +++G+ IH    K   G  +   +  SLI+MY+K G
Sbjct: 309 PACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCG 352


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 223/708 (31%), Positives = 352/708 (49%), Gaps = 91/708 (12%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           L++  L GY +      A+     M   +V+     F   L       +L  G++IHG  
Sbjct: 114 LYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 173

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVC---------------------------------- 384
           + + F + V     ++NMY+K   +                                   
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 233

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G R D  TL +VL A++ +   L + K IH +AI+        +STAL D+
Sbjct: 234 ELVLRMQDEGQRPDSITLVTVLPAAADVGL-LMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + GS+  A  +F+  D   + +WN+M+ GY+ +    KA+ +F  M   G     +TI
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
             A+ AC  L  L++GK +H +  +     D+ V + ++ MY KC  +  A  IFN++  
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              V+W  MI G   NG    AL+ + +M+  G+ PD FT   ++ A + L+     + I
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +I+     + FV  +LVDMY+KCG I  A  LF  +  R+ + WNAM+ G   HG G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
              L LF+ MK   VEP+ +T++ V+SACS++GLV E   +F  M++ YG+EP ++HY  
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD LGRAGR KEA + I +MP     +++ A+LGAC++  + E G+  A+KL  L P +
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDE 652

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------A 832
              +VLL+NI+A+ ++W  V   R  M++K +KK P                       +
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
             I+A +E L+  IK  GYVPDT+ + LDVE++ +E+ L  HSEKLA A+GL++T P + 
Sbjct: 713 KRIYAFLEELVYEIKAAGYVPDTNLI-LDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTT 771

Query: 893 I---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           I                     ++ +E +  +  RFHH ++G+C C D
Sbjct: 772 IHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGD 819



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 240/566 (42%), Gaps = 99/566 (17%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +DL  GK  H +++ +S   + F    ++ MY++C  +  A ++FD+MP+RDL+SWN+I+
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTII 220

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A ++ +G        +   L   +++       +TL  +L      G +   +++HGYA+
Sbjct: 221 AGFSQNGFAK-----KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + G      +S AL ++YSK G +  A+ +FDGM ++ VV W  M+  Y +NG  E+   
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLL--------------- 290
           +F  +   G+ P   ++   L   +DLG     + V  +  +L L               
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395

Query: 291 -----------YN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                      +N  N    V WN  + GY Q G    A+ CF  M    ++ DS T + 
Sbjct: 396 KCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVS 455

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
            + A+A        + IHG  ++S     + V  +L++MYSK G +              
Sbjct: 456 VIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI-------------- 501

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                     H+++++       D ++D  V                             
Sbjct: 502 ----------HMARKLF------DMISDRHV----------------------------- 516

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            TWNAMI GY        AL+LF  M       ++IT  + + AC    ++ +G + H  
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFK 575

Query: 518 AMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
           +MK  + L+  +     ++D+  + G + +A     ++P +P    +  M+  C     +
Sbjct: 576 SMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGAC--KIHK 633

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILV 600
           ++ +      +L  + PDE  + +L+
Sbjct: 634 NIEVGEKAAKKLFELNPDEGGYHVLL 659



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 4/315 (1%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           A +L   +S+ E LH   QI    IKN    +    T L+ ++ + GS+ EA  +FE  D
Sbjct: 53  AVLLELCTSMKE-LH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPID 108

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
               A ++ M+ GY  +++   AL     M     +         +K CG    LK+GK+
Sbjct: 109 DKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   + + F  ++   +G+++MY KC  + DA  +F+ +P  D V+W T+I+G   NG 
Sbjct: 169 IHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGF 228

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              AL +  +M+  G  PD  T   ++ A++ +  L  G+ IH   I+   +    +  +
Sbjct: 229 AKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTA 288

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L DMY+KCG++E A ++F  MD +  V WN+M+ G  Q+G  E+ + +FE M   G++P 
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT 348

Query: 694 SVTFIGVLSACSYTG 708
            VT +  L AC+  G
Sbjct: 349 GVTIMEALHACADLG 363



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 35/335 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L  A     L++GKS H   + +       ++  L  MYS+CGS+  AR +FD M  +
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SWNS++  Y  +GE       +   +F  + E     + +T+   L  C   G +  
Sbjct: 313 TVVSWNSMMDGYVQNGEPE-----KAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLER 367

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH +  ++ L  D  V  +L+++YSK  ++  A  +F+ +  R  V W  M+  YA+
Sbjct: 368 GKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQ 427

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN--- 293
           NG   E  + F ++   G+ PD  ++  V+  +++L   RH + +    I+  L  N   
Sbjct: 428 NGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV 487

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                    + +V+ WN  + GY   G    A++ F  M +  V
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + + +T+L  ++A + +  ++ G + H  ++K  +
Sbjct: 548 EPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDY 581



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 23/169 (13%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+ RHA         K  H  I+ S    + F+T  L+ MYS+CG++  AR+LFD + D
Sbjct: 463 LSVTRHA---------KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV- 175
           R +I+WN+++  Y   G G A        LF  +++     + +T   ++  C  SG V 
Sbjct: 514 RHVITWNAMIDGYGTHGLGRA-----ALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568

Query: 176 ----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
                       Y L+  +  D +  GA+V++  + G+I+EA    + M
Sbjct: 569 EGLRHFKSMKQDYGLEPSM--DHY--GAMVDLLGRAGRIKEAWDFIENM 613


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 222/710 (31%), Positives = 354/710 (49%), Gaps = 91/710 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V W   + GYLQ   +  A   + +M R  ++ D VT +  L+     +  N+  QIH  
Sbjct: 106 VSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTH 165

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
            +K G+   ++V NSL++ Y K  C+                                  
Sbjct: 166 VIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEA 225

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G++   FT A++L A+  L +     +Q+H   +K + V + FV  AL+D
Sbjct: 226 IELFLELHNSGIKPSDFTFAALLSAAVGL-DDTKFGQQVHGFVLKTNFVWNVFVGNALLD 284

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
            Y ++  + E   LF      D  ++N +I  Y  +    ++ +LF  +  +     +  
Sbjct: 285 YYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            AT +      L L+ G+Q+H  A+  G   +  V + ++DMY KC    +AQ IF++I 
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V WT MIS  V  G+ +  ++++  MR +GV  D+ TFA +++A + L ++  GRQ
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H+ LI+    S+ + G +L+D YAKCG + DA   F +M  RN+V WNA++   AQ+GN
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN 524

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            + TL  F+ M   G +PDSV+F+ VLSACS+ G V EA  +F+ M + Y + P+ EHY+
Sbjct: 525 VDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYT 584

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD L R GR  EA +L+  MPFE S  M  ++L +CR+  + E  K  A++L  +E  
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644

Query: 795 -DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------- 832
            D++ Y+ +SNI+A A QWD+V   +  M+ + V+K PA                     
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHP 704

Query: 833 --DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
               I  K+  L K +++ GY PDT   L DV+E  K  +L YHSE+ A A+ L++TP  
Sbjct: 705 EMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDG 764

Query: 891 S--VILSN-------------------KEPLY--ANRFHHLRDGMCPCAD 917
           S  V++ N                   +E +   ++RFHH +DG+C C D
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGD 814



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 258/552 (46%), Gaps = 77/552 (13%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +++ + KFGK+ +A+ LFDGM ER  V W +++  Y ++   +E F L+ D+ R G+ PD
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139

Query: 260 DESVQCVLGVISDLGKRHE-EQVQAYAIKL-----LLYNN-------------------- 293
             ++  +L    +L  ++   Q+  + IKL     L+  N                    
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 294 ---NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
              N + V +N  ++GY   G N  AIE F+ +  S ++    TF   L+A  G D+   
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------MGCVCGL----------- 386
           GQQ+HG  LK+ F   V VGN+L++ YSK             M  + G+           
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319

Query: 387 -----------------RTD--QFTLASVLR-ASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                            R D  QF  A++L  A+SSL   L + +QIH  AI      +S
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSL--NLRMGRQIHCQAITVGANFES 377

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
            V  AL+D+Y +     EA+ +F+N        W AMI  Y+      + + +FS M  +
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G   D+ T A+ ++AC  L  +  G+Q+H+  ++SGF  ++   S +LD Y KCG M DA
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
              F ++P  + V+W  +IS    NG  D  L+ + QM  SG  PD  +F  ++ A S  
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557

Query: 607 TALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNA 664
             +E+      ++ ++ + +       S+VD+  + G  ++A  L  +M    + ++W++
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 665 MLVGLAQHGNGE 676
           +L     H N E
Sbjct: 618 VLNSCRIHKNHE 629



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 218/520 (41%), Gaps = 97/520 (18%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N+L+  Y +   L  A +LF  M ++D +++NS++  Y  S EG  E   E   LF  
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGY--SNEGLNE---EAIELFLE 231

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L  S    S  T A LL   +        + VHG+ LK   VW+ FV  AL++ YSK  +
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + E   LF  M E D + + V++ +YA NG  +E F LF  L  +           +L +
Sbjct: 292 VDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351

Query: 270 -ISDLGKRHEEQVQAYAIKL--------------------------LLYNNNS--NVVLW 300
             S L  R   Q+   AI +                           +++N +  + V W
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW 411

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +S Y+Q G +   I  F +M R+ V  D  TF   L A A   +++LG+Q+H   ++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           SGF S V  G++L++ Y+K GC          +   +++   +PE               
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGC----------MTDAIKSFGEMPE--------------- 506

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               +S    ALI  Y +NG          N DG                      L  F
Sbjct: 507 ---RNSVSWNALISAYAQNG----------NVDG---------------------TLNSF 532

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYV 538
             M  SG + D ++  + + AC     +++    H  +M   +E+       + ++D+  
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEA-LWHFNSMTQIYEVTPKREHYTSMVDVLC 591

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           + G   +A+ +  ++P  P ++ W+++++ C  +   +LA
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 178/370 (48%), Gaps = 3/370 (0%)

Query: 413 IHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           +H H + +   A + +S   +I  + + G +++A  LF+        +W  +I GY+ SN
Sbjct: 60  VHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSN 119

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
            S +A  L++ M   G   D +T+ T +   G L       Q+H + +K G+E +L V +
Sbjct: 120 QSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCN 179

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++D Y K   +  A  +F  +   D V + ++++G  + G  + A+ ++ ++  SG+ P
Sbjct: 180 SLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKP 239

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
            +FTFA L+ A+  L   + G+Q+H  ++K +   + FVG +L+D Y+K   +++   LF
Sbjct: 240 SDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLF 299

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   + + +N ++   A +G  +E+  LF  ++    +     F  +LS  + + L  
Sbjct: 300 YEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT-SSLNL 358

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
                 H      G   E    + LVD   +    KEA ++  ++  +++     A++ A
Sbjct: 359 RMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW-TAMISA 417

Query: 772 CRVQGDTETG 781
              +G  E G
Sbjct: 418 YVQKGKHEEG 427



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 41/364 (11%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FL+  +     S   + ++L  A+   D   G+  H  +L ++ + + F+ N L+  YS+
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
              +    +LF +MP+ D IS+N ++ +YA +G+       E F LFR L+ +     + 
Sbjct: 289 HDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQ-----FKESFDLFRKLQFTRFDRRQF 343

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
             A LL +  SS  +     +H  A+ +G  ++  V  ALV++Y+K    +EA+ +FD +
Sbjct: 344 PFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNI 403

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----- 275
             +  V W  M+ AY + G  EE  ++F D+ R+G+  D  +   +L   ++L       
Sbjct: 404 ACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGR 463

Query: 276 -------RHEEQVQAY-----------------AIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                  R       Y                 AIK        N V WN  +S Y Q G
Sbjct: 464 QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNG 523

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD-------NLNLGQQIHGTTLKSGFY 364
           +  G +  F  MI+S  + DSV+FL  L+A +          + N   QI+  T K   Y
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY 583

Query: 365 SAVI 368
           ++++
Sbjct: 584 TSMV 587



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 34/274 (12%)

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD----------------- 558
           A+ +K+GF  + C S+  ++ +++ G +V A  +F+ +PA +                  
Sbjct: 32  AHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLS 91

Query: 559 --------------VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                         V+WT +I G + + +   A  +Y  MR  G+ PD  T   L+    
Sbjct: 92  KARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L       QIH ++IKL    +  V  SLVD Y K   +  A  LFK M  ++TV +N+
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREK 723
           ++ G +  G  EE ++LF ++   G++P   TF  +LSA    GL    + +  H    K
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDDTKFGQQVHGFVLK 269

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
                 V   + L+D   +  +  E G+L   MP
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMP 303


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 227/687 (33%), Positives = 350/687 (50%), Gaps = 80/687 (11%)

Query: 283 AYAIKLL--LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           +YA+ L   +++   N+ +WN  +  +        ++  F  M+ S +  +S TF     
Sbjct: 76  SYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFK 135

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           + A +   +  +Q+H   LK   +    V  SLI+MYS++G    LR  +          
Sbjct: 136 SCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVG---ELRHARLVF------- 185

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
                                T+ D+   TALI  Y   G + +A  LF+     D+ +W
Sbjct: 186 ------------------DKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSW 227

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           NAMI GY+ S    +AL  F+ M  +    ++ T+ + + ACG L  L+ GK + ++   
Sbjct: 228 NAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRD 287

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
            GF  +L + + ++DMY KCG +  A+ +F+ +   D + W TMI G       + AL +
Sbjct: 288 RGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVL 347

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA----NLIKLDCSSDPFVGISLVD 636
           +  M    V P++ TF  ++ A + L AL+ G+ +HA    NL      ++  +  S++ 
Sbjct: 348 FEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIV 407

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCG +E A  +F+ M  R+   WNAM+ GLA +G+ E  L LFE+M   G +PD +T
Sbjct: 408 MYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDIT 467

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           F+GVLSAC+  G V   +  F  M + YGI P+++HY  ++D L R+G+  EA  L+ +M
Sbjct: 468 FVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM 527

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVT 816
             E   ++  +LL ACR+ G  E G++VAE+L  LEP +S AYVLLSNI+A A +WDDV 
Sbjct: 528 EMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVA 587

Query: 817 SARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVP 853
             R ++  K +KK P                       ++ IF  ++ + + ++E G+VP
Sbjct: 588 KIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVP 647

Query: 854 DTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------------- 893
           DT  VL D++EE KE AL  HSEKLA A+GLIST P S I                    
Sbjct: 648 DTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLIS 707

Query: 894 -LSNKEPLY--ANRFHHLRDGMCPCAD 917
            + N+E +    NRFHH +DG C C D
Sbjct: 708 KIFNREIIARDRNRFHHFKDGFCSCND 734



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 158/334 (47%), Gaps = 37/334 (11%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC-----RNGSMAEAEYLFENKDGFDLATWNAMIF 465
           KQIH   IK+      F  + LI+ +C     R+ S A + +   +    ++  WN +I 
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIE-FCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIR 100

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            + L+     +L LFS M  SG   +  T  +  K+C       + KQ+HA+A+K    L
Sbjct: 101 AHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL 160

Query: 526 DLCVSSGILDMYVKCGAMV-------------------------------DAQSIFNDIP 554
              V + ++ MY + G +                                DA+ +F++IP
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           A D V+W  MI+G V +G  + AL+ + +M+ + V P++ T   ++ A   L +LE G+ 
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           I + +       +  +  +LVDMY+KCG I  A  LF  M+ ++ +LWN M+ G      
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            EE L LFE M    V P+ VTF+ VL AC+  G
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLG 374



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 237/534 (44%), Gaps = 31/534 (5%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF---LFDGM 220
           P L L      + + + +H   +K GL    F    L+  +      R+  +   LF  +
Sbjct: 27  PHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIE-FCALSPSRDLSYALSLFHSI 85

Query: 221 --QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
             Q  ++ +W  ++RA++         HLF  +  SGL P+  +   +    +     HE
Sbjct: 86  HHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHE 145

Query: 279 -EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDS-VTF 335
            +Q+ A+A+KL L+ +     +    +  Y QVG+  H  +    + +R  V + + +T 
Sbjct: 146 AKQLHAHALKLALHLHPH---VHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITG 202

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-MGCVCGLR-----TD 389
            V+   V   D   L  +I    + S  ++A+I G      + + + C   ++      +
Sbjct: 203 YVSEGHV--DDARRLFDEIPAKDVVS--WNAMIAGYVQSGRFEEALACFTRMQEADVSPN 258

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           Q T+ SVL A   L   L L K I           +  +  AL+D+Y + G +  A  LF
Sbjct: 259 QSTMVSVLSACGHL-RSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLF 317

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +  +  D+  WN MI GY   +   +AL LF  M       +++T    + AC  L  L 
Sbjct: 318 DGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALD 377

Query: 510 QGKQMHAYAMK----SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
            GK +HAY  K    +G   ++ + + I+ MY KCG +  A+ +F  + +    +W  MI
Sbjct: 378 LGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMI 437

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           SG   NG  + AL ++ +M   G  PD+ TF  ++ A +    +E G +  +++ K D  
Sbjct: 438 SGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNK-DYG 496

Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
             P +     ++D+ A+ G  ++A +L   M+M  +  +W ++L     HG  E
Sbjct: 497 ISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 160/373 (42%), Gaps = 51/373 (13%)

Query: 71  LGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           +G+  HAR + + S + D      L+T Y   G +  ARRLFD++P +D++SWN+++A Y
Sbjct: 175 VGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGY 234

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             SG        E    F  ++E+    ++ T+  +L  C     +   + +  +    G
Sbjct: 235 VQSGR-----FEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRG 289

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              +  +  ALV++YSK G+I  A+ LFDGM+++DV+LW  M+  Y      EE   LF 
Sbjct: 290 FGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFE 349

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVV---------- 298
            + R  + P+D +   VL   + LG     + V AY  K L    N N V          
Sbjct: 350 VMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMY 409

Query: 299 ----------------------LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                  WN  +SG    G    A+  F  MI    Q D +TF+
Sbjct: 410 AKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFV 469

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL--RTDQFTLA 394
             L+A      + LG +         ++S++     +       GC+  L  R+ +F  A
Sbjct: 470 GVLSACTQAGFVELGHR---------YFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA 520

Query: 395 SVLRASSSL-PEG 406
            VL  +  + P+G
Sbjct: 521 KVLMGNMEMEPDG 533



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 156/379 (41%), Gaps = 73/379 (19%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGS--LVYARRLFDKMPDR--DLISWNSILAA 128
           K  H+ I+ S      F  + L+   +   S  L YA  LF  +  +  ++  WN+++ A
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           ++ +        T    LF  +  S  + +  T   L K C  S     ++ +H +ALK+
Sbjct: 102 HSLT-----PTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKF-------------------------------LF 217
            L     V  +L+++YS+ G++R A+                                LF
Sbjct: 157 ALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLF 216

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----D 272
           D +  +DVV W  M+  Y ++G  EE    F  +  + + P+  ++  VL         +
Sbjct: 217 DEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLE 276

Query: 273 LGK------------RHEEQVQAY------------AIKLLLYNNNSNVVLWNKKLSGYL 308
           LGK            ++ + V A             A KL     + +V+LWN  + GY 
Sbjct: 277 LGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYC 336

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK----SGFY 364
            +     A+  F  M+R NV  + VTFL  L A A    L+LG+ +H    K    +G  
Sbjct: 337 HLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNV 396

Query: 365 SAVIVGNSLINMYSKMGCV 383
           + V +  S+I MY+K GCV
Sbjct: 397 NNVSLWTSIIVMYAKCGCV 415



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 36/280 (12%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGA--MVDAQSIFNDI--PAPDDVAWTTMISG 567
           KQ+H+  +KSG    L   S +++      +  +  A S+F+ I    P+   W T+I  
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
                    +L ++ QM  SG+ P+  TF  L K+ +   A  + +Q+HA+ +KL     
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161

Query: 628 PFVGISLVDMYAKC-------------------------------GNIEDAYILFKQMDM 656
           P V  SL+ MY++                                G+++DA  LF ++  
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           ++ V WNAM+ G  Q G  EE L  F  M+   V P+  T + VLSAC +   +      
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
              +R++ G    ++  + LVD   + G    A +L   M
Sbjct: 282 GSWVRDR-GFGKNLQLVNALVDMYSKCGEIGTARKLFDGM 320



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 11/246 (4%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  +L  F +      S + S   S+L        L LGK   + + +     +  L N 
Sbjct: 240 FEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNA 299

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRE 152
           L+ MYS+CG +  AR+LFD M D+D+I WN+++  Y H          E   LF   LRE
Sbjct: 300 LVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCH-----LSLYEEALVLFEVMLRE 354

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK----IGLVWDEFVSGALVNIYSKFG 208
           ++T  + +T   +L  C S G +   + VH Y  K     G V +  +  +++ +Y+K G
Sbjct: 355 NVT-PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCG 413

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            +  A+ +F  M  R +  W  M+   A NG  E    LF ++   G  PDD +   VL 
Sbjct: 414 CVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLS 473

Query: 269 VISDLG 274
             +  G
Sbjct: 474 ACTQAG 479


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 232/758 (30%), Positives = 380/758 (50%), Gaps = 80/758 (10%)

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           +I    R   A LL+L  S   +     VHG  +  GL  D ++S  L+N+YS+ G +  
Sbjct: 38  TIGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL-CPDDESVQCVLGVIS 271
           A+ +F+ M ER++V W  M+ A   +G  EE   +F++  R+    P++  +   +   S
Sbjct: 98  ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157

Query: 272 DL---GKRHEEQVQAYAIK-----------LLL--YNNNSNV---------------VLW 300
            L   G+    Q+Q++ +K           LL+  Y  + N+               V W
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +SG +++G ++ +++ F  ++  NV  D       L+A +    L  G+QIH   L+
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277

Query: 361 SGFYSAVIVGNSLINMYSKMGCVC------------------------------------ 384
            G      + N LI+ Y K G V                                     
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337

Query: 385 -------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                  GL+ D +  +S+L + +SL   L    Q+H + IK +   DS+V+ +LID+Y 
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASL-HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS---HKALELFSHMHTSGERLDEIT 494
           +   + +A  +F+     D+  +NAMI GY         H+AL +F  M     R   +T
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
             + ++A   L  L   KQ+H    K G  LD+   S ++D+Y  C  + D++ +F+++ 
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V W +M +G V   E + AL+++ +++LS   PDEFTFA +V A+  L +++ G++
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H  L+K     +P++  +L+DMYAKCG+ EDA+  F     R+ V WN+++   A HG 
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G++ L++ E M + G+EP+ +TF+GVLSACS+ GLV +  + F LM  ++GIEPE EHY 
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYV 695

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +V  LGRAGR  +A ELI  MP + +A + R+LL  C   G+ E  +  AE  +  +P 
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 755

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           DS ++ +LSNI+A+   W +    R  MK + V K+P 
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG 793


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 241/737 (32%), Positives = 375/737 (50%), Gaps = 120/737 (16%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL---VALAAVAGTDNLNLGQQI 354
           V WN  +S   +  +   AI+ F  M+    +  S T +   +A + +   D L LG+QI
Sbjct: 79  VSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQI 138

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------------- 381
           HG   + G +      N+L+ MY+K+G                                 
Sbjct: 139 HGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERF 197

Query: 382 ----------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK-NDTVADSFVST 430
                      + G++ D  T ASVL A S L + L   K+IH +A++ +D + +SFV +
Sbjct: 198 MEALMFLRLMVLEGVKPDGVTFASVLPACSHL-DLLRTGKEIHAYALRTDDVIENSFVGS 256

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-GER 489
           AL+D+YC  G +     +F++     +  WNAMI GY  S +  KAL LF  M  + G  
Sbjct: 257 ALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLY 316

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            +  T+++ V A      + + + +H Y +K G E +  + + ++DMY + G +  ++ I
Sbjct: 317 SNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRI 376

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM----------------RLSGVVPDE 593
           F+ +   D V+W T+I+  V  G    AL + H+M                +     P+ 
Sbjct: 377 FDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNS 436

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            T   ++   + L+AL +G++IHA  I+   +S   VG +LVDMYAKCG +  A  +F Q
Sbjct: 437 ITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQ 496

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-----VEPDSVTFIGVLSACSYTG 708
           M +RN + WN +++    HG G+E+L+LFEDM A G     V+P  VTFI + ++CS++G
Sbjct: 497 MPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSG 556

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP--FEASASMHR 766
           +V E    FH M+ ++GIEP  +HY+ +VD +GRAG+ +EA  L+ +MP  F+   +   
Sbjct: 557 MVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAW-S 615

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
           +LLGACR+  + E G+  AE L+ L+P  +S YVLLSNI+++A  WD   + R  MK   
Sbjct: 616 SLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMG 675

Query: 827 VKKDP----------------ADLIFAK-------VEGLIKRIKEGGYVPDTDFVLLDVE 863
           VKK+P                 DL   +       +E L +R+K+ GYVPDT  VL D++
Sbjct: 676 VKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDID 735

Query: 864 EEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY- 901
           EEEKE  L  HSEKLA A+G+++TPP + I                     + ++E +  
Sbjct: 736 EEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILR 795

Query: 902 -ANRFHHLRDGMCPCAD 917
            A RFHH +DG C C D
Sbjct: 796 DARRFHHFKDGTCSCGD 812



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 265/638 (41%), Gaps = 120/638 (18%)

Query: 58  SILRHAISTSDLLLGKSTHARILN--SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           ++L+      +L LGK  HA +            + N L+ MY +CG L  A ++FD++ 
Sbjct: 15  AVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRIT 74

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC---LSS 172
           +RD +SWNSI++A     E   E   + FRL   L E     S  TL  +   C      
Sbjct: 75  ERDQVSWNSIISALCRFEE--WEVAIKAFRLM--LMEGFE-PSSFTLVSMALACSNLRKR 129

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +W  + +HG   + G  W  F + AL+ +Y+K G++ +AK L    ++RD+V W  M+
Sbjct: 130 DGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMI 188

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK---- 287
            ++++N    E       +   G+ PD  +   VL   S L   R  +++ AYA++    
Sbjct: 189 SSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDV 248

Query: 288 ----------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                     + +Y N               +  + LWN  ++GY Q   +  A+  F+ 
Sbjct: 249 IENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIE 308

Query: 323 MIRSNVQYDSVTFLVALA-AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           M  +   Y + T + ++  A    + ++  + IHG  +K G  +   + N+LI+MYS+MG
Sbjct: 309 MEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMG 368

Query: 382 ---------------------------CVCGLRTD------------------------- 389
                                       +CG  +D                         
Sbjct: 369 DIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEK 428

Query: 390 -------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                    TL +VL   +SL   L   K+IH +AI+N   +   V +AL+D+Y + G +
Sbjct: 429 QVPFKPNSITLMTVLPGCASL-SALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCL 487

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-----RLDEITIAT 497
             A  +F+     ++ TWN +I  Y +     ++LELF  M   G      +  E+T   
Sbjct: 488 NLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIA 547

Query: 498 AVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
              +C    M+ +G  + H    + G E      + I+D+  + G + +A  + N +P+ 
Sbjct: 548 LFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSG 607

Query: 557 DDV--AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
            D   AW++++  C           IYH + +  +  +
Sbjct: 608 FDKVGAWSSLLGAC----------RIYHNIEIGEIAAE 635



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 226/504 (44%), Gaps = 73/504 (14%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF--YSAVIVGNSLINMYSKM 380
           MI S    D+  F   L AVAG   L LG+QIH    K G+  +S+V + N+L+NMY K 
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 381 G-------------------------CVC------------------GLRTDQFTLASVL 397
           G                          +C                  G     FTL S+ 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 398 RASSSL--PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE---YLFENK 452
            A S+L   +GL L KQIH    +      +F + AL+ +Y + G + +A+    LFE++
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              DL TWN+MI  +  +    +AL     M   G + D +T A+ + AC  L +L+ GK
Sbjct: 180 ---DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236

Query: 513 QMHAYAMKSGFELDLC-VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           ++HAYA+++   ++   V S ++DMY  CG +   + +F+ +       W  MI+G   +
Sbjct: 237 EIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQS 296

Query: 572 GEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
             ++ AL ++ +M   +G+  +  T + +V A      + +   IH  +IK    ++ ++
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYL 356

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM----- 685
             +L+DMY++ G+I+ +  +F  M+ R+ V WN ++      G   + L L  +M     
Sbjct: 357 QNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEE 416

Query: 686 -----------KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
                      K    +P+S+T + VL  C+    +++  E  H    +  +  +V   S
Sbjct: 417 KSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE-IHAYAIRNLLASQVTVGS 475

Query: 735 FLVDALGRAGRTKEAGELILSMPF 758
            LVD   + G    A  +   MP 
Sbjct: 476 ALVDMYAKCGCLNLARRVFDQMPI 499



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 136/295 (46%), Gaps = 9/295 (3%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKC 540
           M  SG   D       +KA   +  L  GKQ+HA+  K G+     + + + +++MY KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G + DA  +F+ I   D V+W ++IS      E ++A+  +  M + G  P  FT   + 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 601 KASSCLT---ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            A S L     L  G+QIH    +       F   +L+ MYAK G ++DA  L    + R
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-N 716
           + V WN+M+   +Q+    E L     M   GV+PD VTF  VL ACS+  L+    E +
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
            + +R    IE      S LVD     G+  E+G L+     +    +  A++  
Sbjct: 240 AYALRTDDVIENSFVG-SALVDMYCNCGQV-ESGRLVFDSVLDRKIGLWNAMIAG 292



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 162/374 (43%), Gaps = 69/374 (18%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQ-IPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           F+ +  A S  DLL  GK  HA  L +   I + F+ + L+ MY  CG +   R +FD +
Sbjct: 219 FASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSV 278

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSG 173
            DR +  WN+++A YA S     E+  +   LF  +  +   +++  T++ ++   +   
Sbjct: 279 LDRKIGLWNAMIAGYAQS-----EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCE 333

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   E +HGY +K GL  + ++  AL+++YS+ G I+ +K +FD M++RD+V W  ++ 
Sbjct: 334 GISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIIT 393

Query: 234 AYAENGFGEEVFHLFVDLHR----------------SGLCPDDESVQCVL---GVISDLG 274
           +Y   G   +   L  ++ R                    P+  ++  VL     +S L 
Sbjct: 394 SYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALA 453

Query: 275 KRHEEQVQAYAIKLLLYNNNS----------------------------NVVLWNKKLSG 306
           K  E  + AYAI+ LL +  +                            NV+ WN  +  
Sbjct: 454 KGKE--IHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMA 511

Query: 307 YLQVGDNHGAIECFVNMIR-----SNVQYDSVTFLVALAAVAGTDNLNLGQQI------- 354
           Y   G    ++E F +M+        V+   VTF+   A+ + +  ++ G  +       
Sbjct: 512 YGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNE 571

Query: 355 HGTTLKSGFYSAVI 368
           HG       Y+ ++
Sbjct: 572 HGIEPAPDHYACIV 585


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 258/847 (30%), Positives = 387/847 (45%), Gaps = 158/847 (18%)

Query: 160 LTLAPLLKLCLS--------SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           L+L+ LL+LC +        S   + ++ VH   +K GL++  ++   L+N+YSK G   
Sbjct: 7   LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A+ LFD M  R    W  +L AY++ G  +     F  L      P  +SV        
Sbjct: 67  HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL------PQRDSVS------- 113

Query: 272 DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                                       W   + GY  +G  H AI    +M++  ++  
Sbjct: 114 ----------------------------WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
             T    LA+VA T  +  G+++H   +K G    V V NSL+NMY+K    CG      
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK----CG------ 195

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
                                +         V D     A+I ++ + G M  A   FE 
Sbjct: 196 ------------------DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ 237

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQ 510
               D+ TWN+MI G+       +AL++FS M   S    D  T+A+ + AC  L  L  
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGA---------------------------- 542
           GKQ+H++ + +GF++   V + ++ MY +CG                             
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 543 -----MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
                M  A++IF  +   D VAWT MI G   +G    A++++  M   G  P+ +T A
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM- 656
            ++  +S L +L  G+QIH + +K        V  +L+ MYAK GNI  A   F  +   
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           R+TV W +M++ LAQHG+ EE L+LFE M   G+ PD +T++GV SAC++ GLV++  + 
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F +M++   I P + HY+ +VD  GRAG  +EA E I  MP E       +LL ACRV  
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---- 832
           + + GK  AE+L+ LEP +S AY  L+N+++A  +W++    R  MK   VKK+      
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

Query: 833 -------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                              + I+  ++ +   IK+ GYVPDT  VL D+EEE KE+ L +
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717

Query: 874 HSEKLARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRD 910
           HSEKLA A+GLISTP  + +   K     N                       RFHH +D
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777

Query: 911 GMCPCAD 917
           G C C D
Sbjct: 778 GFCSCRD 784



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 39/236 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK---- 113
           S+L    +   L +GK  H+ I+ +       + N L++MYSRCG +  ARRL ++    
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343

Query: 114 -----------------------------MPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
                                        + DRD+++W +++  Y   G     +  E  
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG-----SYGEAI 398

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LFRS+       +  TLA +L +  S   +   + +HG A+K G ++   VS AL+ +Y
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458

Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +K G I  A   FD ++ ERD V W  M+ A A++G  EE   LF  +   GL PD
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/386 (21%), Positives = 151/386 (39%), Gaps = 90/386 (23%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    +T  +  GK  H+ I+      +  ++N+L+ MY++CG  + A+ +FD+M  R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210

Query: 118 DLISWNSILAAYAHSGE-----GNAENVTE-----------GFR-----------LFRSL 150
           D+ SWN+++A +   G+        E + E           GF              + L
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS----- 205
           R+S+    R TLA +L  C +   +   + +H + +  G      V  AL+++YS     
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330

Query: 206 ----------------------------KFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
                                       K G + +AK +F  +++RDVV W  M+  Y +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCV-LGVISDLGKRHEEQVQAYAIK--------- 287
           +G   E  +LF  +   G  P+  ++  +     S     H +Q+   A+K         
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450

Query: 288 ----LLLYNNNSNV----------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
               + +Y    N+                V W   +    Q G    A+E F  M+   
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ 353
           ++ D +T++   +A      +N G+Q
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ 536


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 258/842 (30%), Positives = 394/842 (46%), Gaps = 156/842 (18%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF----GKIREAKFLFD 218
           A LL+LC ++    A   +H  A+K GL+   ++   L++ Y +     G +R+A+ LFD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 219 --GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
              +  R+V  W  +L  +A++G   +   +F ++      P+ ++V             
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEM------PERDAVS------------ 131

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                  W   + G  + G    AI+  ++M          T  
Sbjct: 132 -----------------------WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLT 168

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
             L++ A T    +G+++H   +K G  S V V NS++NMY K G       D  T ++V
Sbjct: 169 NVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG-------DAETASTV 221

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                         +++ V ++ +          A++ +    G M  AE LFE+  G  
Sbjct: 222 F-------------ERMPVRSVSS--------WNAMVSLNTHLGRMDLAESLFESMPGRS 260

Query: 457 LATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           + +WNAMI GY  +    KAL+LFS M H S    DE TI + + AC  L  ++ GKQ+H
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320

Query: 516 AYAM-------------------KSG------------FELDLCVSS--GILDMYVKCGA 542
           AY +                   KSG             E DL V S   +L+ YVK G 
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           M  A+ +F  +   D VAWT MI G   NG  D A+ ++  M   G  P+ +T A ++  
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN-TVL 661
            + L  L+ G+QIH   I+        V  +++ MYA+ G+   A  +F Q+  R  T+ 
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           W +M+V LAQHG GEE + LFE+M   GVEPD +T++GVLSACS+ G V+E    +  ++
Sbjct: 501 WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIK 560

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
            ++ I PE+ HY+ +VD L RAG   EA E I  MP E  A    +LL ACRV  + E  
Sbjct: 561 NEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 620

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------- 832
           +  AEKL++++P +S AY  ++N+++A  +W D        K K V+K+           
Sbjct: 621 ELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSK 680

Query: 833 --------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                         D ++A    + + IK  G+VPD   VL DV++E KE  L  HSEKL
Sbjct: 681 IHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKL 740

Query: 879 ARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
           A A+GLISTP  + +                     ++++E +   A RFHH RDG+C C
Sbjct: 741 AIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSC 800

Query: 916 AD 917
            D
Sbjct: 801 KD 802



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/502 (23%), Positives = 207/502 (41%), Gaps = 113/502 (22%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P R ++  N ++++ +  G +  A  LF+ MP R ++SWN+++A Y  +G        
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLD-----A 278

Query: 142 EGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           +  +LF R L ES       T+  +L  C + G V   + VH Y L+  + ++  V+ AL
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338

Query: 201 VNIYSKFGKIREAKFLFDGMQERD--VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           ++ Y+K G +  A+ + D   E D  V+ +  +L  Y + G                   
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG------------------- 379

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           D ES + + GV+                      NN +VV W   + GY Q G N  AI+
Sbjct: 380 DMESAREMFGVM----------------------NNRDVVAWTAMIVGYEQNGRNDEAID 417

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F +MI    + +S T    L+  A    L+ G+QIH   ++S    +  V N++I MY+
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYA 477

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           + G                    S P    +  Q+     + +T+      T++I    +
Sbjct: 478 RSG--------------------SFPWARRMFDQV---CWRKETI----TWTSMIVALAQ 510

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           +G   EA  LFE                                M  +G   D IT    
Sbjct: 511 HGQGEEAVGLFE-------------------------------EMLRAGVEPDRITYVGV 539

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
           + AC     + +GK+ +   +K+  ++  ++   + ++D+  + G   +AQ     +P  
Sbjct: 540 LSACSHAGFVNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE 598

Query: 556 PDDVAWTTMISGCVDNGEEDLA 577
           PD +AW +++S C  +   +LA
Sbjct: 599 PDAIAWGSLLSACRVHKNAELA 620



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 44/264 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK---- 113
           S+L    +  ++ +GK  HA IL +    +  +TN L++ Y++ GS+  ARR+ D+    
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 361

Query: 114 -----------------------------MPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
                                        M +RD+++W +++  Y  +G  +     E  
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND-----EAI 416

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LFRS+       +  TLA +L +C S   +   + +H  A++  L     VS A++ +Y
Sbjct: 417 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMY 476

Query: 205 SKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           ++ G    A+ +FD +   ++ + W  M+ A A++G GEE   LF ++ R+G+ PD  + 
Sbjct: 477 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITY 536

Query: 264 QCVLGVIS-----DLGKRHEEQVQ 282
             VL   S     + GKR+ +Q++
Sbjct: 537 VGVLSACSHAGFVNEGKRYYDQIK 560



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  GK  H R + S       ++N ++TMY+R GS  +ARR+FD++  R
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWR 495

Query: 118 -DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            + I+W S++ A A  G+G      E   LF  +  +     R+T   +L  C  +G+V 
Sbjct: 496 KETITWTSMIVALAQHGQGE-----EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVN 550

Query: 177 ASETVHGYALKIGLVWDEFVSGA-LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             +  +        +  E    A +V++ ++ G   EA+     M  E D + W  +L A
Sbjct: 551 EGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 610


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 222/712 (31%), Positives = 358/712 (50%), Gaps = 91/712 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV W   + GY Q      A   F +M R  +  D +T    L+     +++N   Q+H
Sbjct: 103 SVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVH 162

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK---MGCVC---------------------------- 384
           G  +K G+ S ++V NSL++ Y K   +G  C                            
Sbjct: 163 GHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNH 222

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G R  +FT A+VL A   + + +   +Q+H   +K + V + FV+ AL
Sbjct: 223 DAINLFFKMQDLGFRPSEFTFAAVLTAGIQM-DDIEFGQQVHSFVVKCNFVWNVFVANAL 281

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D Y ++  + EA  LF      D  ++N +I     +    ++LELF  +  +     +
Sbjct: 282 LDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQ 341

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
              AT +      L L+ G+Q+H+ A+ +    ++ V + ++DMY KC    +A  IF D
Sbjct: 342 FPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFAD 401

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +     V WT +ISG V  G  +  L ++ +M  + +  D  T+A +++A + L +L  G
Sbjct: 402 LAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLG 461

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +Q+H+ +I+  C S+ F G +LVDMYAKCG+I++A  +F++M +RN+V WNA++   AQ+
Sbjct: 462 KQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQN 521

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+G   L+ FE M   G++P+SV+F+ +L ACS+ GLV E  + F+ M + Y +EP  EH
Sbjct: 522 GDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREH 581

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD L R+GR  EA +L+  MPFE    M  ++L +CR+  + E     A++L  ++
Sbjct: 582 YASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMK 641

Query: 793 PF-DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
              D++ YV +SNI+AAA +WD V   +  ++ + ++K PA                   
Sbjct: 642 GLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTS 701

Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 I  K++ L K+++E GY PD+   L +V+EE K  +L YHSE++A A+ LISTP
Sbjct: 702 HPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTP 761

Query: 889 PSSVILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
             S IL  K     N                       RFHH  DG C C D
Sbjct: 762 KGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKD 813



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/570 (24%), Positives = 246/570 (43%), Gaps = 84/570 (14%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           TN ++  Y + G+L  AR LFD M  R +++W  ++  YA           E F LF  +
Sbjct: 76  TNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNR-----FLEAFNLFADM 130

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                    +TLA LL        V     VHG+ +K+G      V  +L++ Y K   +
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL--G 268
             A  LF  M E+D V +  +L  Y++ GF  +  +LF  +   G  P + +   VL  G
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAG 250

Query: 269 VISDLGKRHEEQVQAYAIK-------------LLLYNNNSNVVLWNKKLSGYLQV----- 310
           +  D      +QV ++ +K             L  Y+ +  +V   K      +V     
Sbjct: 251 IQMD-DIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309

Query: 311 ----------GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
                     G    ++E F  +  +        F   L+  A + NL +G+QIH   + 
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369

Query: 361 SGFYSAVIVGNSLINMYSK----------------------MGCVCG------------- 385
           +   S V+VGNSL++MY+K                         + G             
Sbjct: 370 TDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKL 429

Query: 386 --------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                   +  D  T AS+LRA ++L   L L KQ+H   I++  +++ F  +AL+D+Y 
Sbjct: 430 FVEMHRAKIGADSATYASILRACANLA-SLTLGKQLHSRIIRSGCLSNVFSGSALVDMYA 488

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + GS+ EA  +F+     +  +WNA+I  Y  + +   AL  F  M  SG + + ++  +
Sbjct: 489 KCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLS 548

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP- 554
            + AC    ++++G Q +  +M   ++L+      + ++DM  + G   +A+ +   +P 
Sbjct: 549 ILCACSHCGLVEEGLQ-YFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPF 607

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            PD++ W+++++ C  +  ++LA+    Q+
Sbjct: 608 EPDEIMWSSILNSCRIHKNQELAIKAADQL 637



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 143/274 (52%)

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +  +I  Y ++G+++ A  LF++     + TW  +I GY   N   +A  LF+ M   G 
Sbjct: 76  TNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGM 135

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D IT+AT +        + +  Q+H + +K G++  L V + +LD Y K  ++  A  
Sbjct: 136 VPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACH 195

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F  +   D+V +  +++G    G    A++++ +M+  G  P EFTFA ++ A   +  
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           +E G+Q+H+ ++K +   + FV  +L+D Y+K   I +A  LF +M   + + +N ++  
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            A +G  EE+L+LF +++    +     F  +LS
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLS 349



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 34/315 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L   I   D+  G+  H+ ++  + + + F+ N L+  YS+   +V AR+LF +MP+ 
Sbjct: 245 AVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEV 304

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D IS+N ++   A +G      V E   LFR L+ +     +   A LL +  +S  +  
Sbjct: 305 DGISYNVLITCCAWNGR-----VEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEM 359

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H  A+    + +  V  +LV++Y+K  K  EA  +F  +  +  V W  ++  Y +
Sbjct: 360 GRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQ 419

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKR-HEEQVQA-------- 283
            G  E+   LFV++HR+ +  D  +   +L   ++     LGK+ H   +++        
Sbjct: 420 KGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFS 479

Query: 284 ---------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                           A+++       N V WN  +S Y Q GD   A+  F  MI S +
Sbjct: 480 GSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGL 539

Query: 329 QYDSVTFLVALAAVA 343
           Q +SV+FL  L A +
Sbjct: 540 QPNSVSFLSILCACS 554



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 7/240 (2%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           SL L   LQ + F        + ++L  A ++ +L +G+  H++ + +  I +  + N+L
Sbjct: 325 SLELFRELQFTRFDRRQFP--FATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY++C     A R+F  +  +  + W ++++ Y   G        +G +LF  +  + 
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHE-----DGLKLFVEMHRAK 437

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T A +L+ C +   +   + +H   ++ G + + F   ALV++Y+K G I+EA 
Sbjct: 438 IGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEAL 497

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +F  M  R+ V W  ++ AYA+NG G      F  +  SGL P+  S   +L   S  G
Sbjct: 498 QMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCG 557



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 15/190 (7%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           + S+ + SILR   + + L LGK  H+RI+ S  + + F  + L+ MY++CGS+  A ++
Sbjct: 440 ADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQM 499

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           F +MP R+ +SWN++++AYA +G+G         R F  +  S    + ++   +L  C 
Sbjct: 500 FQEMPVRNSVSWNALISAYAQNGDGG-----HALRSFEQMIHSGLQPNSVSFLSILCACS 554

Query: 171 SSGYV-----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERD 224
             G V     + +     Y L+     + + S  +V++  + G+  EA+ L   M  E D
Sbjct: 555 HCGLVEEGLQYFNSMTQVYKLEPRR--EHYAS--MVDMLCRSGRFDEAEKLMARMPFEPD 610

Query: 225 VVLWKVMLRA 234
            ++W  +L +
Sbjct: 611 EIMWSSILNS 620


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 219/598 (36%), Positives = 331/598 (55%), Gaps = 56/598 (9%)

Query: 284 YAIKLLLYN-NNSNVVLWNKKLSGYLQVGD--NHGAIECFVNMIRSNVQYDSVTFLVALA 340
           +  KL+  N  + NVV +N  + G    G   ++  +E F  MI +N+  D+ TF     
Sbjct: 60  HGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFT 119

Query: 341 AVAGTDNLNLG-----QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT------- 388
           A A    LNLG     +Q+H   +K+     V VG+SL+N Y K+GCV   R        
Sbjct: 120 AAA----LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPE 175

Query: 389 ------------------------------------DQFTLASVLRASSSLPEGLHLSKQ 412
                                               ++F   SVL A    PE +   KQ
Sbjct: 176 RNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVC-PEFVDSGKQ 234

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H   +KN  +    V  AL+ +Y + G++  +  LFE     +  TW+A+I GY  + +
Sbjct: 235 VHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGD 294

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           SHKAL+LFS MH +G    E T+   +KAC  +  +++GKQ H Y +KSG+E  +  ++ 
Sbjct: 295 SHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATA 354

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           ++DMY K G   DA+  F+ +  PD V WT++I+G V NG+ + ALS+Y +M++  ++P+
Sbjct: 355 LVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPN 414

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           E T A ++KA S L ALEQG+QIHA  IK     +  +  +L  MYAKCG++E+  ++F+
Sbjct: 415 ELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFR 474

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           +M  R+ V WNAM+ GL+Q+G+G E L+LFE+M+  G +PD +TF+ VLSACS+ G+V  
Sbjct: 475 RMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKR 534

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            +  F++M +++ + P VEHY+ +VD L RAG+  EA E I S   +    + R LL AC
Sbjct: 535 GWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPAC 594

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           R   + E G +  EKLM L   +SSAYVLLS+I+ A  +  DV   R  MK + V+K+
Sbjct: 595 RNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKE 652



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 238/534 (44%), Gaps = 86/534 (16%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPD-RFLTNNLMTMYSRCGSLVYARRLFDKM 114
           ++++L        L  G+  HA I+    +    +L NNL+  Y++CG L  A+ +F+ +
Sbjct: 10  FYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENL 69

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS---LRESITFTSRLTLAPLLKLCLS 171
             ++++S+N ++   +H+G   +  V E FR   +   L ++ TF    T A L     +
Sbjct: 70  KHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAAL-----N 124

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            G  + +  VH   +K   + D FV  +LVN Y K G + EA+ LFD M ER++V W  M
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184

Query: 232 LRAYAENGFGEE---VFHL------------FVDLHRSGLCPD----DESVQC------V 266
           +  YA     +E   VF L            F  +  + +CP+     + V C      V
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGV 244

Query: 267 LGVISDLGKRHEEQVQA----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
           L  +S L        +     Y++ L    ++ N + W+  ++GY Q GD+H A++ F  
Sbjct: 245 LEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSK 304

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M  +       T +  L A +    +  G+Q HG  LKSG+ + +    +L++MY+K G 
Sbjct: 305 MHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGF 364

Query: 383 VCGLRT-------------------------------------------DQFTLASVLRA 399
               R                                            ++ T+ASVL+A
Sbjct: 365 TGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKA 424

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            S+L   L   KQIH   IK     +  + +AL  +Y + GS+ E   +F      D+ +
Sbjct: 425 CSNLA-ALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVS 483

Query: 460 WNAMIFGYILSNNSH--KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
           WNAMI G  LS N H  +ALELF  M   G + D IT  T + AC  + ++K+G
Sbjct: 484 WNAMISG--LSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRG 535



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 19/185 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   + + L  GK  HAR +     P+  + + L TMY++CGSL     +F +M  R
Sbjct: 420 SVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQR 479

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWN++++  + +G G      E   LF  +R   T    +T   +L  C   G V  
Sbjct: 480 DIVSWNAMISGLSQNGHGR-----EALELFEEMRLEGTKPDHITFVTVLSACSHMGIV-- 532

Query: 178 SETVHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAK-FLFDGMQERDVVLWK 229
                G+A    +++DEF           +V++ S+ GK+ EAK F+   + +  + LW+
Sbjct: 533 ---KRGWAY-FNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWR 588

Query: 230 VMLRA 234
           ++L A
Sbjct: 589 ILLPA 593


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 270/830 (32%), Positives = 397/830 (47%), Gaps = 130/830 (15%)

Query: 213 AKFLFDGMQERDVVLWK----VMLRAYAENGFGE-EVFHLFVDLHRSG------------ 255
           A+   DGM  RD         V +  Y   G G  E    FVD+HR G            
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSRVLK 107

Query: 256 ---LCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN-------------NSNVV 298
              L PD  S + +  +    G  R E  V    + + +                  NVV
Sbjct: 108 VCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVV 167

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W   L+GY+Q       +  F  M    V  +  TF   L+AVA    ++LG+++H  +
Sbjct: 168 TWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQS 227

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV----------------------CGL---------- 386
           +K G  S V V NSLINMYSK G V                       GL          
Sbjct: 228 VKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEAL 287

Query: 387 -----------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                      +  Q T ++V++  ++L + L L++Q+H   +K+   +D  V TA++D 
Sbjct: 288 QLFHDSRASMAKLSQSTYSTVIKLCANLKQ-LALARQLHSCVLKHGFHSDGNVMTAIMDA 346

Query: 436 YCRNGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           Y + G + +A  +F    G  ++ +W AMI G I + +   A  LFS M     + +E T
Sbjct: 347 YSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFT 406

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            +T + A   +L+     Q+HA  +K+ ++    V + +L  Y K G   +A SIF  I 
Sbjct: 407 YSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMID 462

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGR 613
             D VAW+ M+S     G+ D A +++ +M + G+ P+EFT +  + A +  TA ++QGR
Sbjct: 463 HKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGR 522

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q HA  IK        VG +LV MYA+ G+I+ A I+F++   R+ V WN+M+ G AQHG
Sbjct: 523 QFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHG 582

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +E L  F  M+  G+E D  TF+ V+  C++ GLV E  + F  M   + I P +EHY
Sbjct: 583 YSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY 642

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           S +VD   RAG+  E   LI  MPF A A + R LLGACRV  + E GK  A+KL+ LEP
Sbjct: 643 SCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEP 702

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------------- 831
            DS+ YVLLSNI+AAA +W +    R  M  K VKK+                       
Sbjct: 703 DDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHP 762

Query: 832 -ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
            ++ I+AK++ +  R+K+ GY P+T  VL D+ EE+KE  L  HSE+LA A+GLI+TPP 
Sbjct: 763 LSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPR 822

Query: 891 SV---------------------ILSNKEPLY--ANRFHHLRDGMCPCAD 917
           +                      ++ ++E +    +RFHH   G C C D
Sbjct: 823 TPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGD 872



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 174/700 (24%), Positives = 300/700 (42%), Gaps = 96/700 (13%)

Query: 107 ARRLFDKMPDRDLISWNS----ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           AR+  D MP RD  + +S     +  Y   G+G  E +     + R  R      SR+  
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSRV-- 105

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQ 221
              LK+C       + E +H   +K G    E  V  ALV++Y K G + + + +F+GM 
Sbjct: 106 ---LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP 162

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR 276
           +R+VV W  +L  Y +     +V  LF  +   G+ P+  +   VL  ++     DLG+R
Sbjct: 163 KRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRR 222

Query: 277 HEEQVQAYAIKLLLYNNNS------------------------NVVLWNKKLSGYLQVGD 312
              Q   +  +  ++  NS                        ++V WN  ++G L    
Sbjct: 223 VHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEH 282

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A++ F +   S  +    T+   +   A    L L +Q+H   LK GF+S   V  +
Sbjct: 283 QLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTA 342

Query: 373 LINMYSKM---------------------------GCVC-----------------GLRT 388
           +++ YSK                            GC+                   ++ 
Sbjct: 343 IMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKP 402

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           ++FT ++VL AS  +     L  QIH   IK +      V TAL+  Y + G+  EA  +
Sbjct: 403 NEFTYSTVLTASIPI-----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSI 457

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM- 507
           F+  D  D+  W+AM+  Y  + +   A  +F  M   G + +E TI++A+ AC      
Sbjct: 458 FKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAG 517

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           + QG+Q HA ++K  ++  +CV S ++ MY + G++  A+ +F      D V+W +MISG
Sbjct: 518 IDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISG 577

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G    AL  + QM   G+  D  TF  ++   +    +++G+Q   +++ +D +  
Sbjct: 578 YAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMV-MDHNIS 636

Query: 628 PFVG--ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFED 684
           P +     +VD+Y++ G +++   L + M      ++W  +L     H N E  L     
Sbjct: 637 PTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVE--LGKLAA 694

Query: 685 MKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            K   +EP DS T++ + +  +  G   E  E   LM  K
Sbjct: 695 QKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSK 734



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 230/551 (41%), Gaps = 86/551 (15%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY +CG +   R +F+ MP R++++W S+L  Y    +G A   ++   LF  +R  
Sbjct: 141 LVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV---QGRA--CSDVMALFFRMRAE 195

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
             + +  T   +L    S G V     VH  ++K G     FV  +L+N+YSK G + EA
Sbjct: 196 GVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEA 255

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS-------------GLCPDD 260
           K +F  M+ RD+V W  ++     N    E   LF D   S              LC + 
Sbjct: 256 KAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANL 315

Query: 261 ESV-------QCVLG-----------VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNK 302
           + +        CVL             I D   +  E   A+ I  LL   + NVV W  
Sbjct: 316 KQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNI-FLLMPGSQNVVSWTA 374

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            + G +Q  D   A   F  M   NV+ +  T+   L A        L  QIH   +K+ 
Sbjct: 375 MIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKTN 430

Query: 363 FYSAVIVGNSLINMYSKMG----------------------------------------- 381
           +  A  VG +L+  YSK+G                                         
Sbjct: 431 YQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFI 490

Query: 382 --CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
              + G++ ++FT++S + A +S   G+   +Q H  +IK        V +AL+ +Y R 
Sbjct: 491 KMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARK 550

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           GS+  A  +FE +   DL +WN+MI GY     S +AL+ F  M T G  +D  T    +
Sbjct: 551 GSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVI 610

Query: 500 KACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-D 557
             C    ++K+G+Q   +  M       +   S ++D+Y + G + +  ++   +P P  
Sbjct: 611 VGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAG 670

Query: 558 DVAWTTMISGC 568
            + W T++  C
Sbjct: 671 AMVWRTLLGAC 681



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 158/379 (41%), Gaps = 45/379 (11%)

Query: 39  LPFLQKSHFSSSS----SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           L  LQ  H S +S    S S + ++++   +   L L +  H+ +L      D  +   +
Sbjct: 284 LEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAI 343

Query: 95  MTMYSRCGSLVYARRLFDKMP-DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           M  YS+CG L  A  +F  MP  ++++SW +++     + +     +     LF  +RE 
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNAD-----IPLAAALFSRMRED 398

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               +  T + +L    ++        +H   +K        V  AL+  YSK G   EA
Sbjct: 399 NVKPNEFTYSTVL----TASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEA 454

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-- 271
             +F  +  +DVV W  ML  Y++ G  +   ++F+ +   G+ P++ ++   +   +  
Sbjct: 455 LSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASP 514

Query: 272 ----DLGK---------RHEEQVQAYAIKLLLY---------------NNNSNVVLWNKK 303
               D G+         R+++ +   +  + +Y                 + ++V WN  
Sbjct: 515 TAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSM 574

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           +SGY Q G +  A++ F  M    ++ D  TFL  +        +  GQQ   + +    
Sbjct: 575 ISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHN 634

Query: 364 YSAVIVGNS-LINMYSKMG 381
            S  +   S ++++YS+ G
Sbjct: 635 ISPTMEHYSCMVDLYSRAG 653


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 207/583 (35%), Positives = 326/583 (55%), Gaps = 51/583 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  D  T++SVL     L + + L+  +HV+A+K+    + FV  ALIDVY + G + E
Sbjct: 164 GVAGDTVTVSSVLPMCVLLGDQV-LALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A+ +F   +  DL TWN++I G      +  AL++F  M  SG   D +T+ +   A   
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282

Query: 505 LLMLKQGKQMHAYAMKSGFELD-LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
               +  K +H Y M+ G+++D +   + I+DMY K   +  AQ +F+ +P  D V+W T
Sbjct: 283 GGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342

Query: 564 MISGCVDNGEEDLALSIY-HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +I+G + NG  + A+  Y H  +  G+   + TF  ++ A S L AL+QG ++HA  IK+
Sbjct: 343 LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             + D +VG  L+D+YAKCG + +A +LF++M  R+T  WNA++ GL  HG+G E L LF
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLF 462

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             M+  G++PD VTF+ +L+ACS+ GLV +    F +M+  Y I P  +HY+ + D LGR
Sbjct: 463 SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG+  EA   I +MP +  +++  ALLGACR+ G+ E GK  ++ L  L+P +   YVL+
Sbjct: 523 AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLM 582

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------------DLIFA 837
           SN++A   +WD V   R  ++R+N++K P                          + I A
Sbjct: 583 SNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQA 642

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
           ++  L+ +I+  GYV D  FVL DVE++EKE  L  HSE+LA A+G+I+TP  + +    
Sbjct: 643 ELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYK 702

Query: 894 -----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                            ++ +E +   +NRFHH +DG C C D
Sbjct: 703 NLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGD 745



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 206/417 (49%), Gaps = 8/417 (1%)

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
            TL + F  A +   +   +   + C    R D FT  S++RA+ S       + Q+H  
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS----AAQLHAC 92

Query: 417 AIKNDTVADS-FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           A++   V  S F S +L+  Y R G ++EA  +F+     D+  WNAM+ G   +  + +
Sbjct: 93  ALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAE 152

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ LF  M   G   D +T+++ +  C  L        MH YA+K G + +L V + ++D
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y K G + +AQ +F+ +   D V W ++ISGC   G+   AL ++  MR SGV PD  T
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV-GISLVDMYAKCGNIEDAYILFKQM 654
              L  A +        + +H  +++     D  + G ++VDMYAK  NIE A  +F  M
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEA 713
            ++++V WN ++ G  Q+G   E ++ +  M+ H G++    TF+ VL A S+ G + + 
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG 392

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
               H +  K G+  +V   + L+D   + G+  EA  L   MP  ++   +  + G
Sbjct: 393 MR-MHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISG 448



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 151/699 (21%), Positives = 276/699 (39%), Gaps = 146/699 (20%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI-PDRF 89
           LP  +  LL  +    +        + S++R A S +        HA  L    + P  F
Sbjct: 48  LPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVF 104

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
            + +L+  Y R G +  A ++FD+M +RD+ +WN++L     SG        E   LF  
Sbjct: 105 TSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAML-----SGLCRNARAAEAVGLFGR 159

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +         +T++ +L +C+  G    +  +H YA+K GL  + FV  AL+++Y K G 
Sbjct: 160 MVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGM 219

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + EA+ +F GM+ RD+V W  ++    + G       +F  +  SG+ PD  ++  +   
Sbjct: 220 LEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASA 279

Query: 270 ISDLGK-RHEEQVQAYAIK--------------LLLYNNNSNV---------------VL 299
           I+  G  R  + +  Y ++              + +Y   SN+               V 
Sbjct: 280 IAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVS 339

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           WN  ++GY+Q G  + A+E + +M +   ++    TF+  L A +    L  G ++H  +
Sbjct: 340 WNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALS 399

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           +K G    V VG  LI++Y+K    CG   +   L   +   S+ P              
Sbjct: 400 IKIGLNVDVYVGTCLIDLYAK----CGKLAEAMLLFEKMPRRSTGPW------------- 442

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                       A+I     +G  AEA  LF                             
Sbjct: 443 -----------NAIISGLGVHGHGAEALTLF----------------------------- 462

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDM 536
             S M   G + D +T  + + AC    ++ QG+      M+  +++       + + DM
Sbjct: 463 --SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD-VMQVTYDIVPIAKHYACMADM 519

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
             + G + +A +   ++P  PD   W  ++  C                R+ G V     
Sbjct: 520 LGRAGQLDEAFNFIQNMPIKPDSAVWGALLGAC----------------RIHGNV----- 558

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN---IEDAYILFK 652
                         E G+    NL +LD  +  +  + + +MYAK G    +++   L +
Sbjct: 559 --------------EMGKVASQNLFELDPENVGYY-VLMSNMYAKVGKWDGVDEVRSLVR 603

Query: 653 QMDMRNTVLWNAMLVGLAQH----GNGEETLKLFEDMKA 687
           + +++ T  W+++ V  + +    GN  E     E+++A
Sbjct: 604 RQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQA 642


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 233/800 (29%), Positives = 391/800 (48%), Gaps = 103/800 (12%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVS-GALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           CL   Y+  S   + Y +   +   + +S   +++ Y+  G++  A   F    +RDVV 
Sbjct: 83  CLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVS 142

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----GVISDLGKRHEEQVQA 283
           W  ML  + +NG   +   +F+D+ RS     D++   V+     V+ D G     QV  
Sbjct: 143 WNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGI--QVHG 200

Query: 284 YAIKLLLYNNN----------------------------SNVVLWNKKLSGYLQVGDNHG 315
             +++  Y +                              N V W+  ++G +Q  ++  
Sbjct: 201 LIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHIL 260

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
            +E F  M +  +      +     + AG   L +G Q+H   LK  F S + VG + ++
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLD 320

Query: 376 MYSK--------------------------MGCV-----------------CGLRTDQFT 392
           MY+K                          +GCV                  GL  ++ +
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           L+    A +S+   L   +Q+H  ++K+   ++  V+ +++D+Y +  +++EA  +F+  
Sbjct: 381 LSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEM 439

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           +  D  +WNA+I  +  + N  + L LF+ M       D+ T  + +KAC     L  G 
Sbjct: 440 ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           ++H   +KSG  LD  V   ++DMY KCG + +A+ I + I     V+W  +I+G     
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
             + A S +++M    V PD FT+AI++ A + L ++  G+QIH  +IKL+  SD ++  
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITS 619

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +LVDMY+KCGN++D+ ++F++   ++ V WNAM+ G AQHG GEE L  FE M+   V P
Sbjct: 620 TLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRP 679

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           +  TF+ +L AC++ G + +    F+ M  +YG+EP++EHYS ++D +GR+GR  EA +L
Sbjct: 680 NHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKL 739

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I  MPFEA A + R LL  C++ G+ E  +     ++ LEP DSSA +LLSNI+A A  W
Sbjct: 740 IQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMW 799

Query: 813 DDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEG 849
             V+  R  M+   +KK+P                        + I+  +  L+  +K  
Sbjct: 800 GKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWI 859

Query: 850 GYVPDTDFVLLDVEEEEKER 869
           GY+PD DF L+D E EE E+
Sbjct: 860 GYIPDIDF-LIDEESEEYEQ 878


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 215/634 (33%), Positives = 336/634 (52%), Gaps = 68/634 (10%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA-LAAVAGTDNLNLGQ 352
           + N++ W+  +S Y Q G +  A+  FV++ R + ++ +   L + + A      +  G 
Sbjct: 112 HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGA 171

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------CG 385
           Q+HG  ++SGF   V VG SLI+ YSK G +                           CG
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG 231

Query: 386 ----------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                           +  D++ ++SVL A S L E L   KQIH + ++  T  D  V 
Sbjct: 232 RSAVSLELFAQMRETNVVPDRYVVSSVLSACSML-EFLEGGKQIHAYVLRRGTEMDVSVV 290

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             LID Y +   +     LF+     ++ +W  MI GY+ ++   +A++LF  M+  G +
Sbjct: 291 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWK 350

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            D     + + +CG    L+QG+Q+HAY +K+  E D  V +G++DMY K   ++DA+ +
Sbjct: 351 PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKV 410

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+ +   + +++  MI G     +   AL ++H+MR+    P+EFTFA L+ A+S L +L
Sbjct: 411 FDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASL 470

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
             G+Q H  L+K+     PFV  +LVDMYAKCG+IE+A  +F     R+ V WN+M+   
Sbjct: 471 RHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTH 530

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQHG  EE L +F +M   G++P+ VTF+ VLSACS+ G V +   +F+ M   +GI+P 
Sbjct: 531 AQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPG 589

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            EHY+ +V  LGR+G+  EA E I  MP E +A + R+LL ACR+ G+ E GK+ AE  +
Sbjct: 590 TEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAI 649

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFAK- 838
           + +P DS +Y+LLSNIFA+   W DV   R  M    V K+P           ++  A+ 
Sbjct: 650 STDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARD 709

Query: 839 -----------VEGLIKRIKEGGYVPDTDFVLLD 861
                      ++ LI+ IK  GYVPD   +L++
Sbjct: 710 TTHREADIGSVLDILIQHIKGAGYVPDATALLMN 743



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 161/602 (26%), Positives = 270/602 (44%), Gaps = 95/602 (15%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R   A LL+L +S   +   + +HG  +  GL  D F++  L+N+ SK  ++  A+ +FD
Sbjct: 49  RREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFD 108

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDLGKRH 277
            M  ++++ W  M+  Y++ G+ EE   +FVDL R SG  P++  +  V+   + LG   
Sbjct: 109 KMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVE 168

Query: 278 E-EQVQAYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYL 308
           +  Q+  + ++             +  Y+ N N+               V W   ++GY 
Sbjct: 169 KGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYT 228

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G +  ++E F  M  +NV  D       L+A +  + L  G+QIH   L+ G    V 
Sbjct: 229 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 288

Query: 369 VGNSLINMYSKMGCV-------------------------------------------CG 385
           V N LI+ Y+K   V                                            G
Sbjct: 289 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 348

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + D F   SVL +  S  E L   +Q+H + IK +  +D FV   LID+Y ++  + +A
Sbjct: 349 WKPDGFACTSVLTSCGS-REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDA 407

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
           + +F+     ++ ++NAMI GY       +ALELF  M    ++ +E T A  + A   L
Sbjct: 408 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNL 467

Query: 506 LMLKQGKQMHAYAMKSGFELDLC--VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
             L+ G+Q H   +K G  LD C  V++ ++DMY KCG++ +A+ +FN     D V W +
Sbjct: 468 ASLRHGQQFHNQLVKMG--LDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 525

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MIS    +GE + AL ++ +M   G+ P+  TF  ++ A S    +E G   H N     
Sbjct: 526 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLN-HFN----- 579

Query: 624 CSSDPFVGIS--------LVDMYAKCGNIEDAYILFKQMDMRN-TVLWNAMLVGLAQHGN 674
             S P  GI         +V +  + G + +A    ++M +    ++W ++L      GN
Sbjct: 580 --SMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGN 637

Query: 675 GE 676
            E
Sbjct: 638 VE 639



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 258/605 (42%), Gaps = 96/605 (15%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           ++ ++L+ +IS + ++  K  H +I+ S    D FL N L+ + S+   +  AR +FDKM
Sbjct: 51  EFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKM 110

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSG 173
           P ++LI+W+S+++ Y+  G        E   +F  L R+S    +   LA +++ C   G
Sbjct: 111 PHKNLITWSSMVSMYSQQGYSE-----EALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            V     +HG+ ++ G   D +V  +L++ YSK G I EA+ +FD + E+  V W  ++ 
Sbjct: 166 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 225

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAI-- 286
            Y + G       LF  +  + + PD   V  VL   S L     GK    Q+ AY +  
Sbjct: 226 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGK----QIHAYVLRR 281

Query: 287 --------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                                     KL       N++ W   +SGY+Q   +  A++ F
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M R   + D       L +    + L  G+Q+H  T+K+   S   V N LI+MY+K 
Sbjct: 342 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 401

Query: 381 GCVCGLRT-------------------------------------------DQFTLASVL 397
             +   +                                            ++FT A+++
Sbjct: 402 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALI 461

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A+S+L    H  +Q H   +K       FV+ AL+D+Y + GS+ EA  +F +    D+
Sbjct: 462 TAASNLASLRH-GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDV 520

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQ 513
             WN+MI  +     + +AL +F  M   G + + +T    + AC     ++ G      
Sbjct: 521 VCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNS 580

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
           M  + +K G E   CV S    +  + G + +A+     +P  P  + W +++S C   G
Sbjct: 581 MPGFGIKPGTEHYACVVS----LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAG 636

Query: 573 EEDLA 577
             +L 
Sbjct: 637 NVELG 641



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 138/276 (50%), Gaps = 2/276 (0%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           K +H   + SG + D  +++ ++++  K   + +A+ +F+ +P  + + W++M+S     
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 572 GEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           G  + AL ++  + R SG  P+EF  A +++A + L  +E+G Q+H  +++     D +V
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 188

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G SL+D Y+K GNIE+A ++F Q+  +  V W  ++ G  + G    +L+LF  M+   V
Sbjct: 189 GTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNV 248

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            PD      VLSACS    + E  +  H    + G E +V   + L+D   +  R K   
Sbjct: 249 VPDRYVVSSVLSACSMLEFL-EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 307

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
           +L   M  +   S    + G  +   D E  K   E
Sbjct: 308 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGE 343



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 2/167 (1%)

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           +++  + P    FA L++ S     +   + IH  +I     SD F+   L+++ +K   
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLS 702
           +++A ++F +M  +N + W++M+   +Q G  EE L +F D+ +  G  P+      V+ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           AC+  G+V +  +  H    + G + +V   + L+D   + G  +EA
Sbjct: 160 ACTQLGVVEKGAQ-LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA 205


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 200/512 (39%), Positives = 284/512 (55%), Gaps = 77/512 (15%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G + ++ T++T VKAC  +  L+QGKQ H Y +K GFE D+ V + ++ MY +CG+
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 543 MVDAQSIFN-------------------------------DIPAPDDVAWTTMISGCVDN 571
           + DA  +F+                               ++   D V+WT +I+G   N
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G  D +L++++QMR +G+  D F    ++ A + L ALE GRQ HA +++   + D  VG
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +LVDMYAK G++EDA  +F +M  RN V WN+++ G AQHG G + + LFE M   G++
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+ ++F+GVLSACS+TGLV+E    F+LM + YGI P+V HY+ ++D LGRAG   EA  
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
            I  MP E   S+  ALLGACR+ G+TE  K +AE L+ +E   +  YVLLSNI+AAA Q
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 812 WDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKE 848
           WDD    R  MK + V K P                          I   +E L +++K 
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY------- 901
            GYVP+ +FVL DVE++EKE +L +HSEKLA A+G+I+T P + I   K           
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 902 ----------------ANRFHHLRDGMCPCAD 917
                           ANRFHH +DG C C D
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGD 512



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 174/335 (51%), Gaps = 36/335 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G++ +QFTL++V++A +S+   L   KQ H + IK    +D  V TAL+ +Y R GS+ +
Sbjct: 5   GVKPNQFTLSTVVKACASIAS-LEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF------------------------ 480
           A ++F+        TWNAMI G+  + +  KAL+LF                        
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 481 -------SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
                  + M  +G + D   + + + AC  L  L+ G+Q HAY ++SGF LD+ V S +
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +DMY K G+M DA  +F+ +P  ++V+W ++I+GC  +G  + A+ ++ QM  +G+ P+E
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILF 651
            +F  ++ A S    + +GR  + NL+  +    P V     ++D+  + G +++A    
Sbjct: 244 ISFVGVLSACSHTGLVNEGRG-YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302

Query: 652 KQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDM 685
             M +   V +W A+L     HGN E   ++ E +
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHL 337



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 36/252 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK---- 113
           ++++   S + L  GK  H  I+      D  +   L+ MY+RCGSL  A  +FDK    
Sbjct: 15  TVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSER 74

Query: 114 ---------------------------MPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
                                      M +RD++SW +++A YA +G G+     E   +
Sbjct: 75  STRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD-----ESLNV 129

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +R++   + R  +  +L  C     +      H Y ++ G   D  V  ALV++Y+K
Sbjct: 130 FNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAK 189

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + +A  +FD M +R+ V W  ++   A++G G +   LF  + ++G+ P++ S   V
Sbjct: 190 SGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGV 249

Query: 267 LGVISDLGKRHE 278
           L   S  G  +E
Sbjct: 250 LSACSHTGLVNE 261



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/425 (20%), Positives = 169/425 (39%), Gaps = 102/425 (24%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           ++ TL+ ++K C S   +   +  H Y +K+G   D  V  ALV++Y++ G + +A  +F
Sbjct: 9   NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           D M ER    W  M+  +A+N                                 D+ K  
Sbjct: 69  DKMSERSTRTWNAMITGHAQN--------------------------------RDMKK-- 94

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                  A+KL    +  +VV W   ++GY Q G    ++  F  M ++ ++ D      
Sbjct: 95  -------ALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGS 147

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
            L+A A    L LG+Q H   ++SGF   ++VG++L++MY+K G          ++    
Sbjct: 148 VLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSG----------SMEDAC 197

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           +    +P+             +N+   +S ++        ++G   +A  LFE       
Sbjct: 198 QVFDKMPQ-------------RNEVSWNSIITGC-----AQHGRGNDAVLLFE------- 232

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHA 516
                                    M  +G + +EI+    + AC    ++ +G+   + 
Sbjct: 233 ------------------------QMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNL 268

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEED 575
                G   D+   + ++D+  + G + +A++  N +P  PD   W  ++  C  +G  +
Sbjct: 269 MTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTE 328

Query: 576 LALSI 580
           LA  I
Sbjct: 329 LAKRI 333



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 13/182 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      + L LG+  HA ++ S    D  + + L+ MY++ GS+  A ++FDKMP R
Sbjct: 147 SVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR 206

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + +SWNSI+   A  G GN     +   LF  + ++    + ++   +L  C  +G V  
Sbjct: 207 NEVSWNSIITGCAQHGRGN-----DAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLV-- 259

Query: 178 SETVHGY----ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
                GY        G+V D      ++++  + G + EA+   +GM  E DV +W  +L
Sbjct: 260 -NEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALL 318

Query: 233 RA 234
            A
Sbjct: 319 GA 320


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 237/748 (31%), Positives = 362/748 (48%), Gaps = 100/748 (13%)

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y + G +++AK LF  +Q      W  M+R +   G        ++ +  +G+ PD  +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 263 ----VQCVLGVIS-DLGKRHEEQVQAYAIK---------LLLYNNNSNV----------- 297
               V+   G+ S  +GK   E V    +K         + LY  N ++           
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 298 ----VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
               VLWN  L+GY++ GD+  AI+ F+ M  S ++ +SVTF   L+  A    L+LG Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +HG  +  G      V N+L+ MYSK  C+                              
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G++ D  T AS L   + L    H  K+IH + I++  V D F+ +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH-CKEIHGYIIRHAVVLDVFLKS 299

Query: 431 ALIDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           ALID+Y  CR+  MA+   +      FD      MI GY+L+  + +ALE F  +     
Sbjct: 300 ALIDIYFKCRDVEMAQK--ILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           +   +T ++   A   L  L  GK++H   +K+  +    V S ILDMY KCG +  A  
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +FN I   D + W +MI+ C  NG    A++++ QM + G   D  + +  + A + L A
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L  G++IH  +IK    SD +   SL+DMYAKCGN+  +  +F +M  RN V WN+++  
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISA 537

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG+ +E L LF +M  +G++PD VTF+G++SAC + G V E    +HLM E+YGI  
Sbjct: 538 YGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPA 597

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            +EHY+ + D  GRAGR  EA E I SMPF   A +   LLGAC + G+ E  +  ++ L
Sbjct: 598 RMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHL 657

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------A 832
             L+P +S  YVLL+N+ A A +W  V   R  MK + V+K P                A
Sbjct: 658 FDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAA 717

Query: 833 D-------LIFAKVEGLIKRIKEGGYVP 853
           D        I++ ++ L+  +K+ GYVP
Sbjct: 718 DGSHPLTAQIYSVLDSLLLELKKEGYVP 745



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 163/654 (24%), Positives = 286/654 (43%), Gaps = 80/654 (12%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY R GSL  A+ LF  +      +WN ++  +   G+ N          +  +  +   
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNY-----ALLFYLKMLGAGVS 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
             + T   ++K C     V   + VH     +GL  D FV  +L+ +Y++ G + +A++L
Sbjct: 56  PDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYL 115

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----- 271
           FD + ++D VLW VML  Y +NG       +F+++  S + P+  +  CVL V +     
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175

Query: 272 DLGKR------------------------HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           DLG +                         + Q    A KL   +  S++V WN  +SGY
Sbjct: 176 DLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGY 235

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           +Q G    A   F  MI + ++ DS+TF   L  V    +L   ++IHG  ++      V
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV 295

Query: 368 IVGNSLINMY---------SKMGC--------VCG------------------------- 385
            + ++LI++Y          K+ C        VC                          
Sbjct: 296 FLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355

Query: 386 -LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            ++    T +S+  A + L   L+L K++H   IK        V +A++D+Y + G +  
Sbjct: 356 RMKPTSVTFSSIFPAFAGL-AALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDL 414

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      D   WN+MI     +    +A+ LF  M   G R D ++I+ A+ AC  
Sbjct: 415 ACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACAN 474

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  GK++H   +K     DL   S ++DMY KCG +  ++ +F+ +   ++V+W ++
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSI 534

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQIHANLIKLD 623
           IS   ++G+    L+++H+M  +G+ PD  TF  ++ A      +++G R  H    +  
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYG 594

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGE 676
             +       + DM+ + G +++A+     M    +  +W  +L     HGN E
Sbjct: 595 IPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVE 648



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/623 (24%), Positives = 281/623 (45%), Gaps = 90/623 (14%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F+ +LL +L+      S     +  +++       + +GK  H  +       D F+ ++
Sbjct: 39  FNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSS 98

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRE 152
           L+ +Y+  G L  A+ LFD +P +D + WN +L  Y  +G+ GNA       ++F  +R 
Sbjct: 99  LIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNA------IKIFLEMRH 152

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           S    + +T A +L +C S   +     +HG A+  GL  D  V+  L+ +YSK   ++ 
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQA 212

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ LFD   + D+V W  ++  Y +NG   E  HLF  +  +G+ PD  +    L  +++
Sbjct: 213 ARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272

Query: 273 -LGKRHEEQVQAYAI----------------------------KLLLYNNNSNVVLWNKK 303
            L  +H +++  Y I                            K+L  +++ + V+    
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTM 332

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           +SGY+  G N  A+E F  +++  ++  SVTF     A AG   LNLG+++HG+ +K+  
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392

Query: 364 YSAVIVGNSLINMYSKMG----------------CVC----------------------- 384
                VG+++++MY+K G                 +C                       
Sbjct: 393 DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQ 452

Query: 385 ----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G R D  +++  L A ++LP  LH  K+IH   IK    +D +  ++LID+Y + G
Sbjct: 453 MGMEGTRYDCVSISGALSACANLP-ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCG 511

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           ++  +  +F+     +  +WN++I  Y    +  + L LF  M  +G + D +T    + 
Sbjct: 512 NLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571

Query: 501 ACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           ACG    + +G + +      Y + +  E   CV+    DM+ + G + +A    N +P 
Sbjct: 572 ACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVA----DMFGRAGRLDEAFETINSMPF 627

Query: 556 PDDVA-WTTMISGCVDNGEEDLA 577
           P D   W T++  C  +G  +LA
Sbjct: 628 PPDAGVWGTLLGACHIHGNVELA 650


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 227/711 (31%), Positives = 348/711 (48%), Gaps = 89/711 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N V W   + GY Q      A   +  M RS V+ D +TF   L+    T  L    QIH
Sbjct: 107 NEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIH 166

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------CGLRT 388
              ++ GF +++IV NSL++ Y K  C+                            G R 
Sbjct: 167 SHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFRE 226

Query: 389 DQFTLASVLRASSSLPEGLHLS---------------KQIHVHAIKNDTVADSFVSTALI 433
           +   L   +R     P G   +               +QIH  AIK   V D FV+ AL+
Sbjct: 227 EALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALL 286

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D Y ++  +  A+ LF+     D  ++N +I GY  +    K+ +LF  +  +       
Sbjct: 287 DFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNF 346

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
             AT +      L L  G+Q HA A+ +    ++ V + ++DMY KC    DA  IF ++
Sbjct: 347 PFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANL 406

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              + V WT +IS  V  G  + AL ++ +M    V  D+ TFA  +KAS+ L ++  G+
Sbjct: 407 AYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGK 466

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q+H+++I+L   S  F G  LVDMYA CG+++DA  +FK+M  RN V WNA++   +Q+G
Sbjct: 467 QLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNG 526

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           + E T   F DM   G+ PDSV+F+ VL+ACS+ GLV +A   F+ M + Y ++P  +HY
Sbjct: 527 DAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHY 586

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + ++D L R+GR  EA  LI  MPFE    M  ++L +CR+  + +  K  A++L  ++ 
Sbjct: 587 ATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDA 646

Query: 794 F-DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
             D++AYV +SNI+A A +W++    +  M+ + VKK  A                    
Sbjct: 647 LRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTH 706

Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
              + I  K+  L++ + + GY PDT   L +V+EE K  +L YHSE+LA A+ LI+TP 
Sbjct: 707 PQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPE 766

Query: 890 SS--VILSNKEPLY---------------------ANRFHHLRDGMCPCAD 917
            S  +I+ N                          ++RFHH RDG C C D
Sbjct: 767 GSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGD 817



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/612 (23%), Positives = 267/612 (43%), Gaps = 79/612 (12%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +V+ Y K   +  A+ LF+ M  R+ V W +M+  Y++N   +E F+L+ ++ RSG+ PD
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 260 DESVQCVLGVISDLGKRHEE-QVQAYAIK------LLLYNN------------------- 293
             +   +L    D     E  Q+ ++ I+      L+++N+                   
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 294 ---NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                + V +N  ++GY + G    A++ F+ M   + Q    TF   L    G++++  
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           GQQIHG  +K+ +   + V N+L++ YSK   +                           
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322

Query: 384 CGLRTDQFTLASVLRASS---------------SLPEGLHLSKQIHVHAIKNDTVADSFV 428
            G     F L   L+ +S               ++   L + +Q H  A+    V++  V
Sbjct: 323 NGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQV 382

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             AL+D+Y +     +A  +F N    +   W A+I  Y+      +AL++F  M+    
Sbjct: 383 GNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENV 442

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D+ T A+ +KA   L  +  GKQ+H+  ++ G    +   S ++DMY  CG+M DA  
Sbjct: 443 HGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIE 502

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F ++P  + V W  +IS    NG+ +   S +  M  SG+ PD  +F  ++ A S    
Sbjct: 503 VFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGL 562

Query: 609 LEQGRQIHANLI---KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNA 664
           +E+      ++    KLD     +   +++D+  + G   +A  L  +M    + V+W++
Sbjct: 563 VEKALWYFNSMTQVYKLDPRRKHYA--TMIDVLCRSGRFNEAENLISEMPFEPDEVMWSS 620

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           +L     H N +   K  + +       D+  ++ + +  +  G    A +    MRE+ 
Sbjct: 621 VLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRER- 679

Query: 725 GIEPEVEHYSFL 736
           G++ +V  YS++
Sbjct: 680 GVK-KVTAYSWV 690



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 142/598 (23%), Positives = 249/598 (41%), Gaps = 132/598 (22%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N+L+  Y +   L  A +LF +MP +D +S+N ++  Y   G        E  +LF  +R
Sbjct: 182 NSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFRE-----EALKLFMQMR 236

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 S  T A +L + + S  V   + +HG A+K   VWD FV+ AL++ YSK   I 
Sbjct: 237 NMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYID 296

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            AK LFD M E D V + +++  YA NG  E+ F LF  L  +     +     +L V +
Sbjct: 297 LAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAA 356

Query: 272 -----DLGKR-HEEQVQAYAIKLLLYNNN-----------------------SNVVLWNK 302
                 +G++ H + V   A+  +   N                         N V W  
Sbjct: 357 IELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTA 416

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            +S Y+Q G +  A++ F  M R NV  D  TF   L A A   +++LG+Q+H + ++ G
Sbjct: 417 IISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLG 476

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
             S+V  G+ L++MY+     CG                S+ + + + K++    I    
Sbjct: 477 LLSSVFSGSVLVDMYAN----CG----------------SMKDAIEVFKEMPDRNI---- 512

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
                   ALI  Y +NG   +AE  F +                            F+ 
Sbjct: 513 ----VCWNALISAYSQNG---DAEATFSS----------------------------FAD 537

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKC 540
           M  SG   D ++  + + AC    ++++    +  +M   ++LD      + ++D+  + 
Sbjct: 538 MIESGLYPDSVSFLSVLTACSHRGLVEKA-LWYFNSMTQVYKLDPRRKHYATMIDVLCRS 596

Query: 541 GAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           G   +A+++ +++P  PD+V W+++++ C  +  +DLA                      
Sbjct: 597 GRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLA---------------------- 634

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
                        ++    L K+D   D    +++ ++YA+ G  E+A  + K M  R
Sbjct: 635 -------------KKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRER 679



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 1/330 (0%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           ++  Y ++ ++  A  LFE+    +  +W  MI GY  +N   +A  L++ M  SG + D
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            IT AT +        LK+  Q+H++ ++ GF   L V + ++D Y K   +  A  +F+
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           ++P  D V++  MI+G    G  + AL ++ QMR     P  FTFA ++  S     +  
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIH   IK     D FV  +L+D Y+K   I+ A  LF +M   + V +N ++ G A 
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +G  E++  LF+ ++    +  +  F  +LS  +    +S   +  H          EV+
Sbjct: 323 NGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQT-HAQAVVTTAVSEVQ 381

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEAS 761
             + LVD   +  + ++A  +  ++ +  S
Sbjct: 382 VGNALVDMYAKCEKFEDANRIFANLAYRNS 411



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 205/477 (42%), Gaps = 70/477 (14%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V+ + +TK  +R       +L  F+Q  +     S   + ++L  ++ + D++ G+  H 
Sbjct: 214 VMITGYTKYGFR-----EEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHG 268

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
             + +S + D F+ N L+  YS+   +  A+ LFD+MP+ D +S+N I+  YA +G+   
Sbjct: 269 LAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQ--- 325

Query: 138 ENVTEGFRLFRSL------RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
               + F LF+ L      R++  F + L++A  ++L LS G        H  A+    V
Sbjct: 326 --YEKSFDLFKRLQGTSFDRKNFPFATMLSVAA-IELNLSMG-----RQTHAQAVVTTAV 377

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V  ALV++Y+K  K  +A  +F  +  R+ V W  ++  Y + GF EE   +F ++
Sbjct: 378 SEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM 437

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLL-------------YNN---- 293
           +R  +  D  +    L   ++L      +Q+ +  I+L L             Y N    
Sbjct: 438 NRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSM 497

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                      + N+V WN  +S Y Q GD       F +MI S +  DSV+FL  L A 
Sbjct: 498 KDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTAC 557

Query: 343 AGTD-------NLNLGQQIHGTTLKSGFYSAVI-------VGNSLINMYSKMGCVCGLRT 388
           +            N   Q++    +   Y+ +I         N   N+ S+M        
Sbjct: 558 SHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEM----PFEP 613

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           D+   +SVL  S  + +   L+K+      K D + D+     + ++Y   G    A
Sbjct: 614 DEVMWSSVLN-SCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENA 669


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 261/922 (28%), Positives = 426/922 (46%), Gaps = 133/922 (14%)

Query: 123 NSILAAYAHSGEGNAENVTEGFR-LFRSLRESITFTSRLTL----APLLKLCLSSGYVWA 177
           N  L  ++H       ++ E F+ L     + +  T+R  L    +  L+LC S   +  
Sbjct: 9   NHTLPTFSH----RPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQ 64

Query: 178 SETVHGYALKIGLVWDE-FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
            + +H + LK     D  F+    V++Y K G   +A  +FD M ER +  W  M+ A  
Sbjct: 65  GQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACV 124

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKL------- 288
             G   E   L+ ++   G+  D  +  CVL       +R    ++   A+K        
Sbjct: 125 SAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVF 184

Query: 289 -------------------LLYNN----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                              +L+++      + V WN  +S ++  G++  A+  F  M  
Sbjct: 185 VCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQE 244

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---- 381
             V+ ++ TF+ AL A  G   + +G+ IH   LKS  ++ V V N+LI MY+  G    
Sbjct: 245 VGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMED 304

Query: 382 ------------CVC---------------------------GLRTDQFTLASVLRASSS 402
                       CV                            G + DQ ++ +++ A+S 
Sbjct: 305 AERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMI-AASG 363

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
               L    ++H +AIK+   ++  +  +LID+Y +   +      FE     DL +W  
Sbjct: 364 RSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTT 423

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I GY  +     AL L   +      +D + I + + AC  L   K  K++H Y +K G
Sbjct: 424 IIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGG 483

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
              D+ + + I+++Y +   +  A+ +F  I + D V+WT+MI+ CV NG    AL +++
Sbjct: 484 LA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFN 542

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            +  + + PD  T   ++ A++ L++L++G++IH  LI+     +  +  SLVDMYA+CG
Sbjct: 543 SLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCG 602

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            +E+A  +F  +  R+ +LW +M+     HG G++ + LF  M    V PD +TF+ +L 
Sbjct: 603 TMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLY 662

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           ACS++GLV E  ++F +M+ +Y +EP  EHY+ LVD L R+   +EA   + +MP E SA
Sbjct: 663 ACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSA 722

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
            +  ALLGACR+  + + G+  A+KL+ L   +S  YVL+SN FAA  +W+DV   R  M
Sbjct: 723 EVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIM 782

Query: 823 KRKNVKKDPA-----------------------DLIFAKVEGLIKRIKE-GGYVPDTDFV 858
           K   +KK P                        + I+ K+    K +KE GGY   T  V
Sbjct: 783 KGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLV 842

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----------------- 901
             DV EEEK + LY HSE+LA  YGL+ T   + +   K                     
Sbjct: 843 FHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQR 902

Query: 902 ------ANRFHHLRDGMCPCAD 917
                 A+RFHH   G+C C D
Sbjct: 903 TLVVRDASRFHHFERGLCSCGD 924


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 207/579 (35%), Positives = 319/579 (55%), Gaps = 47/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   + FT   VL+A + L + L L  +IH   +K     D FV T+L+ +Y + G + +
Sbjct: 107 GFLPNNFTFPFVLKACARLLD-LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F++    ++ +W A+I GYI      +A+++F  +       D  TI   + AC  
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  G+ +H   M+ G   ++ V + ++DMY KCG M  A+S+F+ +P  D V+W  M
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   NG    A+ ++ QM+   V PD +T   ++ A + L ALE G  +   + + + 
Sbjct: 286 IQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             +P +G +L+D+YAKCG++  A+ +FK M  ++ V+WNA++ GLA +G  + +  LF  
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           ++  G++PD  TFIG+L  C++ GLV E    F+ M   + + P +EHY  +VD LGRAG
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA +LI +MP EA+A +  ALLGACR+  DT+  +   ++L+ LEP++S  YVLLSN
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSN 525

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEG 841
           I++A  +WD+    R  M  K ++K P                       ++ I+AK++ 
Sbjct: 526 IYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDE 585

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------- 893
           L K++K  GYVP TDFVL D+EEEEKE  L  HSEKLA A+GLIS  P++VI        
Sbjct: 586 LTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRV 645

Query: 894 -------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                        ++ +E      NRFH  R+G C C D
Sbjct: 646 CGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCND 684



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 148/264 (56%)

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
             +LF      ++  WN MI G + ++    A+E +  M + G   +  T    +KAC  
Sbjct: 65  TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           LL L+ G ++H   +K GF+ D+ V + ++ +Y KCG + DA  +F+DIP  + V+WT +
Sbjct: 125 LLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI 184

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ISG +  G+   A+ ++ ++    + PD FT   ++ A + L  L  G  IH  ++++  
Sbjct: 185 ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + FVG SLVDMYAKCGN+E A  +F  M  ++ V W AM+ G A +G  +E + LF  
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304

Query: 685 MKAHGVEPDSVTFIGVLSACSYTG 708
           M+   V+PD  T +GVLSAC+  G
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLG 328



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 205/466 (43%), Gaps = 54/466 (11%)

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           R GLC D+  +  +L    D    +  +   + IK        N+ LWN  + G +    
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIK------QPNIFLWNTMIRGLVSNDC 92

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              AIE +  M       ++ TF   L A A   +L LG +IH   +K GF   V V  S
Sbjct: 93  FDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTS 152

Query: 373 LINMYSKMGCV-------------------------------------------CGLRTD 389
           L+ +Y+K G +                                             L  D
Sbjct: 153 LVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
            FT+  VL A + L + L+  + IH   ++   V + FV T+L+D+Y + G+M +A  +F
Sbjct: 213 SFTIVRVLSACTQLGD-LNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVF 271

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +     D+ +W AMI GY L+    +A++LF  M     + D  T+   + AC  L  L+
Sbjct: 272 DGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALE 331

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G+ +     ++ F  +  + + ++D+Y KCG+M  A  +F  +   D V W  +ISG  
Sbjct: 332 LGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLA 391

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG   ++  ++ Q+   G+ PD  TF  L+   +    +++GR+   ++ +   S  P 
Sbjct: 392 MNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF-FSLTPS 450

Query: 630 VGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
           +     +VD+  + G +++A+ L + M M  N ++W A+L     H
Sbjct: 451 IEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 5/216 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      DL LG   H  ++      D F+  +L+ +Y++CG L  A ++FD +PD++
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW +I++ Y   G+       E   +FR L E        T+  +L  C   G + + 
Sbjct: 178 VVSWTAIISGYIGVGK-----FREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG 232

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E +H   +++G+V + FV  +LV++Y+K G + +A+ +FDGM E+D+V W  M++ YA N
Sbjct: 233 EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALN 292

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           G  +E   LF+ + R  + PD  +V  VL   + LG
Sbjct: 293 GLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLG 328



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/466 (21%), Positives = 187/466 (40%), Gaps = 77/466 (16%)

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + GL  D ++   ++     F      +FLF  +++ ++ LW  M+R    N   ++   
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIK-------------LLLYN 292
            +  +   G  P++ +   VL   +  L  +   ++    +K             + LY 
Sbjct: 99  FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYA 158

Query: 293 N---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                           + NVV W   +SGY+ VG    AI+ F  ++  N+  DS T + 
Sbjct: 159 KCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVR 218

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------------- 381
            L+A     +LN G+ IH   ++ G    V VG SL++MY+K G                
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 278

Query: 382 -----------CVCGL----------------RTDQFTLASVLRASSSLPEGLHLSKQIH 414
                       + GL                + D +T+  VL A + L   L L + + 
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLG-ALELGEWVS 337

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
               +N+ + +  + TALID+Y + GSM+ A  +F+     D   WNA+I G  ++    
Sbjct: 338 GLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVK 397

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SG 532
            +  LF  +   G + D  T    +  C    ++ +G++ +  +M   F L   +     
Sbjct: 398 ISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRR-YFNSMYRFFSLTPSIEHYGC 456

Query: 533 ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           ++D+  + G + +A  +  ++P   + + W  ++  C  + +  LA
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLA 502



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 10/224 (4%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L       DL  G+  H  I+    + + F+  +L+ MY++CG++  AR +FD MP++D
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 278

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW +++  YA +G        E   LF  ++         T+  +L  C   G +   
Sbjct: 279 IVSWGAMIQGYALNGLPK-----EAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELG 333

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E V G   +   +++  +  AL+++Y+K G +  A  +F GM+E+D V+W  ++   A N
Sbjct: 334 EWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMN 393

Query: 239 GFGEEVFHLFVDLHRSGLCPDDES-----VQCVLGVISDLGKRH 277
           G+ +  F LF  + + G+ PD  +       C    + D G+R+
Sbjct: 394 GYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRY 437



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 134/323 (41%), Gaps = 38/323 (11%)

Query: 92  NNLMTMYSRCG----SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
           N L+ M  RC        Y R LF ++   ++  WN+++      G  + +   +    +
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMI-----RGLVSNDCFDDAIEFY 100

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +R      +  T   +LK C     +     +H   +K G   D FV  +LV +Y+K 
Sbjct: 101 GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC 160

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G + +A  +FD + +++VV W  ++  Y   G   E   +F  L    L PD  ++  VL
Sbjct: 161 GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVL 220

Query: 268 GVISDLGKRHE-EQVQAYAIKLLLYNN----------------------------NSNVV 298
              + LG  +  E +    +++ +  N                              ++V
Sbjct: 221 SACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIV 280

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W   + GY   G    AI+ F+ M R NV+ D  T +  L+A A    L LG+ + G  
Sbjct: 281 SWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV 340

Query: 359 LKSGFYSAVIVGNSLINMYSKMG 381
            ++ F    ++G +LI++Y+K G
Sbjct: 341 DRNEFLYNPVLGTALIDLYAKCG 363


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 234/716 (32%), Positives = 364/716 (50%), Gaps = 102/716 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   L+GY+Q G     +  F  M    V  +  TF   L+ VA    ++LGQ +H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------CGLRT-------------------- 388
             ++K G  S V V NSL+NMY+K G V       C + T                    
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240

Query: 389 ----------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                            + T ++V+   ++L   L L++Q+H   +K+   +   V TAL
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKH-LGLARQLHSSVLKHGFHSYGNVMTAL 299

Query: 433 IDVYCRNGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           +D Y + G + +A  +F    G  ++ +W AMI G I + +   A  LFS M   G   +
Sbjct: 300 MDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPN 359

Query: 492 EITIATAVKACGCLLMLKQGK---QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           ++T +T       +L + +     Q+HA  +K+ +E    V + ++  Y K  +  +A S
Sbjct: 360 DLTYST-------ILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALS 412

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA-SSCLT 607
           IF  I   D V+W+ M++     G+ + A + + +M + G+ P+EFT +  + A +S   
Sbjct: 413 IFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAA 472

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            ++ GRQ HA  IK  C     V  +LV MYA+ G+IE+A  +F++   R+ + WN+ML 
Sbjct: 473 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLS 532

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G AQHG  ++ L +F  M+  G++ D +TF+ V+  C++ GLV E  + F LM   YGI 
Sbjct: 533 GYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGIT 592

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P ++HY+ +VD   RAG+  E   LI  MPF A  ++ RALLGACRV  + E GK  AEK
Sbjct: 593 PTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEK 652

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------- 831
           L++LEP DS+ YVLLSNI++AA +W +    R  M  K V+K+                 
Sbjct: 653 LLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIA 712

Query: 832 -------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  ++ I+AK+  +  ++K+ GY PDT FV  DV E++KE  L  HSE+LA A+GL
Sbjct: 713 SDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGL 772

Query: 885 ISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           I+TPP++ +                     + ++E +  +  RFHH + G+C C D
Sbjct: 773 IATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGD 828



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 252/591 (42%), Gaps = 91/591 (15%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
             I++   S  D +LGK  HA  +       D  +  +L+ MY    S++  R++F+ M 
Sbjct: 59  LGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGML 118

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R++++W S+L  Y  +G      + +   LF  +R    + +  T + +L +  S G V
Sbjct: 119 KRNVVTWTSLLTGYIQAGV-----LLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMV 173

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH  ++K G     FV  +L+N+Y+K G + EA+ +F  M+ RD+V W  ++   
Sbjct: 174 DLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGL 233

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH---EEQVQAYAIK----- 287
             NG   E   LF D   S     + +   V+ + ++L  +H     Q+ +  +K     
Sbjct: 234 VLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANL--KHLGLARQLHSSVLKHGFHS 291

Query: 288 ------------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                                    LL + + NVV W   + G +Q GD   A   F  M
Sbjct: 292 YGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRM 351

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC- 382
               V  + +T+    + +      +   QIH   +K+ +     VG +L+  YSK+ C 
Sbjct: 352 REDGVAPNDLTY----STILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKL-CS 406

Query: 383 -----------------------VC--------------------GLRTDQFTLASVLRA 399
                                   C                    GL+ ++FT++S + A
Sbjct: 407 TEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDA 466

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            +S   G+ L +Q H  +IK+       VS+AL+ +Y R GS+  A+ +FE +   DL +
Sbjct: 467 CASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLS 526

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN+M+ GY     S KAL++F  M   G  +D +T  + +  C    ++++G+Q     +
Sbjct: 527 WNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMV 586

Query: 520 KS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           +  G    +   + ++D+Y + G + +  S+   +P P     W  ++  C
Sbjct: 587 RDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGAC 637



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 165/328 (50%), Gaps = 9/328 (2%)

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQ 513
           F   T   M F        H+AL+ F   H   G  +    +   +K CG +     GKQ
Sbjct: 17  FPTRTPWTMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQ 76

Query: 514 MHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           +HA  ++ G +  D+ V + ++DMY+   +++D + +F  +   + V WT++++G +  G
Sbjct: 77  LHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAG 136

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
                +S++ +MR  GV P+ FTF+ ++   +    ++ G+ +HA  IK  C S  FV  
Sbjct: 137 VLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCN 196

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           SL++MYAKCG +E+A ++F +M+ R+ V WN ++ GL  +G   E L+LF D ++     
Sbjct: 197 SLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITML 256

Query: 693 DSVTFIGVLSACS---YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
              T+  V++ C+   + GL  +     H    K+G        + L+DA  +AG+  +A
Sbjct: 257 TESTYSTVINLCANLKHLGLARQ----LHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312

Query: 750 GELILSMPFEASASMHRALLGACRVQGD 777
            ++ L M    +     A++  C   GD
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGD 340



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 161/312 (51%), Gaps = 3/312 (0%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIK-NDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           L  +++   S+P+ + L KQ+H   ++      D  V T+L+D+Y    S+ +   +FE 
Sbjct: 58  LLGIIKICGSVPDRV-LGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEG 116

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               ++ TW +++ GYI +      + LF  M   G   +  T ++ +       M+  G
Sbjct: 117 MLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG 176

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           + +HA ++K G    + V + +++MY KCG + +A+ +F  +   D V+W T+++G V N
Sbjct: 177 QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLN 236

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G +  AL ++H  R S  +  E T++ ++   + L  L   RQ+H++++K    S   V 
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM 296

Query: 632 ISLVDMYAKCGNIEDAYILFKQMD-MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
            +L+D Y K G ++ A  +F  M   +N V W AM+ G  Q+G+      LF  M+  GV
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356

Query: 691 EPDSVTFIGVLS 702
            P+ +T+  +L+
Sbjct: 357 APNDLTYSTILT 368


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 296/983 (30%), Positives = 466/983 (47%), Gaps = 150/983 (15%)

Query: 76   HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
            H  ++      D FL+N+L+ +Y++   L  AR++FD M +R+ +SW  +++ Y  SG  
Sbjct: 79   HLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGIT 138

Query: 136  NAENVTEGFRLFRS-LRESITFT--SRLTLAPLLKLCLSSG--YVWASETVHGYALKIGL 190
            +     E FR+F++ L E   F+  +  T   +L+ C  +G   +  +  VHG   K   
Sbjct: 139  D-----EAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIY 193

Query: 191  VWDEFVSGALVNIYSK--FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
              +  V  AL+++Y     G   +A+ +FD    RD++ W  ++  YA+ G+    F LF
Sbjct: 194  ASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLF 253

Query: 249  VD-LHRSG---LCPDDESV----------QCVLGVISDLGKRHEEQ------------VQ 282
            +  LH      L P++ +            C  GV+  +  R  +             V 
Sbjct: 254  MAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVS 313

Query: 283  AYA-------IKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
            A+A        K +  N    N V  N  + G ++   +  A+  F+   R +   ++ T
Sbjct: 314  AFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMG-TRDSFVVNTDT 372

Query: 335  FLVALAAVA----GTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSKMGCV------ 383
            F+V L+AVA      D L  G+++HG  L++G     + + N L+NMY+K G +      
Sbjct: 373  FVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRV 432

Query: 384  --------------------------------CGLR-----TDQFTLASVLRASSSLPEG 406
                                            C +R        F   S L + +SL   
Sbjct: 433  FRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASL-RL 491

Query: 407  LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
            L   +Q+H  A+K     D+ VS AL+ +Y   G+ +E+  +F +    D+ +WN+ I G
Sbjct: 492  LTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS-IMG 550

Query: 467  YILSNNSHKA--LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
             ++S+++  A  +E+FS+M  SG   +++T    + A   L +L+ GKQ+HA  +K G  
Sbjct: 551  VMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAI 610

Query: 525  LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQ 583
             D  V + ++  Y K G M   + +F+ +    D V+W +MISG + NG     +     
Sbjct: 611  EDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWL 670

Query: 584  MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            M  S  + D  TF+I++ A + + ALE+G ++HA  I+    SD  V  +L+DMY+KCG 
Sbjct: 671  MMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGR 730

Query: 644  IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            I+ A  +F  M  +N   WN+M+ G A+HG GE+ L++FE+M+ +G  PD VTF+ VLSA
Sbjct: 731  IDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSA 790

Query: 704  CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
            CS+ GLV    + F +M E +GI P +EHYS ++D LGRAG+  +  E I  MP + +  
Sbjct: 791  CSHAGLVDRGLDYFEMM-EDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTL 849

Query: 764  MHRALLGACRVQGD---TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            + R +L ACR   D    + GK  +  L+ LEP +   YVL SN +AA  +W+D   AR 
Sbjct: 850  IWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARA 909

Query: 821  EMKRKNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYVPDTDF 857
             M    +KK+                           I+ K+  LI++IK  GYVP T+F
Sbjct: 910  AMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEF 969

Query: 858  VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN-------------- 903
             L D+EEE KE  L YHSEKLA A+ L  +     I   K                    
Sbjct: 970  ALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVC 1029

Query: 904  ---------RFHHLRDGMCPCAD 917
                     RFHH  DG C C D
Sbjct: 1030 RQIILRDSIRFHHFEDGKCSCGD 1052



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 284/610 (46%), Gaps = 74/610 (12%)

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           A E +H   +K GL  D F+S  LVN+Y+K  ++  A+ +FDGM ER+ V W  ++  Y 
Sbjct: 74  APERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYV 133

Query: 237 ENGFGEEVFHLFVDLHRSG---LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
            +G  +E F +F  +   G     P   +   VL    D G      + A+A+++     
Sbjct: 134 LSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGP----DLLAFAVQV----- 184

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL--- 350
                               HG       ++   +   + T   AL ++ G  ++ L   
Sbjct: 185 --------------------HG-------LVSKTIYASNTTVCNALISMYGNCSVGLPLQ 217

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG----------------LRTDQFTLA 394
            QQ+  TT        +I  N+L+++Y+K G V                  LR ++ T  
Sbjct: 218 AQQVFDTTP----VRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFG 273

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S++ A+S       +  Q+    +K+ + +D +V +AL+  + R+G + EA+ +F N   
Sbjct: 274 SLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKE 333

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM----LKQ 510
            +  T N +I G +  + S +A+ +F     S   ++  T    + A     +    L +
Sbjct: 334 RNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFV-VNTDTFVVLLSAVAEFSIPEDGLMR 392

Query: 511 GKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           G+++H + +++G  +L + +S+G+++MY KCGA+  A  +F  + A D V+W T+IS   
Sbjct: 393 GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLD 452

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC--LTALEQGRQIHANLIKLDCSSD 627
            NG  + A+  Y  MR   + P    FA +   SSC  L  L  G+Q+H + +K     D
Sbjct: 453 QNGFCEGAMMNYCMMRQGCISPS--NFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLD 510

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML-VGLAQHGNGEETLKLFEDMK 686
             V  +LV MY  CG   +++ +F  M   + V WN+++ V ++ H    E++++F +M 
Sbjct: 511 TSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMM 570

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+ P+ VTF+ +LSA S   ++ E  +  H +  K+G   +    + L+    ++G  
Sbjct: 571 RSGLTPNKVTFVNLLSALSPLSVL-ELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDM 629

Query: 747 KEAGELILSM 756
               +L  SM
Sbjct: 630 DSCEQLFSSM 639



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 152/319 (47%), Gaps = 21/319 (6%)

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           R   + PE LHL        +K     D F+S  L+++Y +   +A A  +F+     + 
Sbjct: 69  RGEEAAPERLHL------ELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNA 122

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSG---ERLDEITIATAVKAC--GCLLMLKQGK 512
            +W  ++ GY+LS  + +A  +F  M   G    R    T  + ++AC      +L    
Sbjct: 123 VSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAV 182

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKC--GAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           Q+H    K+ +  +  V + ++ MY  C  G  + AQ +F+  P  D + W  ++S    
Sbjct: 183 QVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAK 242

Query: 571 NG----EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG--RQIHANLIKLDC 624
            G       L +++ H      + P+E TF  L+ A+S L++   G   Q+ A ++K   
Sbjct: 243 KGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGS 301

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           SSD +VG +LV  +A+ G +++A  +F  +  RN V  N ++VGL +    EE + +F  
Sbjct: 302 SSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMG 361

Query: 685 MKAHGVEPDSVTFIGVLSA 703
            +   V  ++ TF+ +LSA
Sbjct: 362 TRDSFVV-NTDTFVVLLSA 379



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 136/339 (40%), Gaps = 46/339 (13%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H   +      D  ++N L+ MY  CG+   +  +F+ M + D++SWNSI+  
Sbjct: 492 LTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGV 551

Query: 129 YAHSGEGNAENVTEGFRLFRS--LRESITFTSRLT-LAPLLKLCLSSGYVWASETVHGYA 185
              S    AE+V     + RS      +TF + L+ L+PL  L L        + VH   
Sbjct: 552 MVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLEL-------GKQVHAVV 604

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEV 244
           LK G + D  V  AL++ Y+K G +   + LF  M   RD V W  M+  Y  NG  +E 
Sbjct: 605 LKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQET 664

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDL------------GKRHEEQVQA--------- 283
                 +  S    D  +   VL   + +            G R + +            
Sbjct: 665 MDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDM 724

Query: 284 --------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                   YA K+    +  N   WN  +SGY + G    A+E F  M R+    D VTF
Sbjct: 725 YSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTF 784

Query: 336 LVALAAVAGTDNLNLG------QQIHGTTLKSGFYSAVI 368
           +  L+A +    ++ G       + HG       YS VI
Sbjct: 785 VSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVI 823



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 7/190 (3%)

Query: 57  FSILRHAI-STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FSI+ +A  S + L  G   HA  + S    D  + + L+ MYS+CG + YA ++F+ M 
Sbjct: 683 FSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMS 742

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            ++  SWNS+++ YA  G G      +   +F  ++ +      +T   +L  C  +G V
Sbjct: 743 QKNEFSWNSMISGYARHGLGE-----KALEIFEEMQRNGACPDHVTFVSVLSACSHAGLV 797

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
                        G++        ++++  + GK+ + +   + M  + + ++W+ +L A
Sbjct: 798 DRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVA 857

Query: 235 YAENGFGEEV 244
             ++  G+ +
Sbjct: 858 CRQSKDGDRI 867


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 275/977 (28%), Positives = 446/977 (45%), Gaps = 167/977 (17%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H+R+  +    D +L NNL+  Y   G  V AR++FD+MP R+ +SW  +++ Y+ +GE 
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC--LSSGYVWASETVHGYALKIGLVWD 193
                 E     R + +   F++       L+ C  L S  +     +HG   K+    D
Sbjct: 84  K-----EALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVD 138

Query: 194 EFVSGALVNIYSKFG-KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             VS  L+++Y K G  +  A   FD +Q ++ V W  ++  Y++ G     F +F  + 
Sbjct: 139 AVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQ 198

Query: 253 RSGLCPDD---------------------ESVQCVL---GVISDL-------GKRHEEQV 281
             G  P +                     E + C +   G ++DL           +   
Sbjct: 199 CDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGS 258

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
             +A K+       N V  N  + G ++      A + F++M  S +     ++++ L++
Sbjct: 259 LIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSS 317

Query: 342 -----VAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRT------- 388
                +A    L  G+++HG  + +G    ++ +GN L+NMY+K G +   R        
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTE 377

Query: 389 -------------DQ-----------------------FTLASVLRASSSLPEGLHLSKQ 412
                        DQ                       FTL S + + +SL     L +Q
Sbjct: 378 KDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWA-KLGQQ 436

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH  ++K     +  VS AL+ +Y   G + E   +F +    D  +WN++I     S  
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSER 496

Query: 473 S-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           S  +A+  F +   +G++L+ IT ++ + A   L   + GKQ+H  A+K     +    +
Sbjct: 497 SLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTEN 556

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            ++  Y KCG M   + IF+ +    DDV W +MISG + N     AL +   M  +G  
Sbjct: 557 ALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQR 616

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D F +A ++ A + +  LE+G ++HA  ++    SD  VG +LVDMY+KCG ++ A   
Sbjct: 617 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F                          T+ LF +MK  G   PD VTF+GVLSACS+ GL
Sbjct: 677 FN-------------------------TMPLFANMKLDGQTPPDHVTFVGVLSACSHAGL 711

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           + E +++F  M + YG+ P +EH+S + D LGRAG   +  + I  MP + +  + R +L
Sbjct: 712 LEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 771

Query: 770 GA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           GA CR  G   E GK  AE L  LEP ++  YVLL N++AA  +W+D+  AR +MK  +V
Sbjct: 772 GACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADV 831

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK+                        AD+I+ K++ L +++++ GYVP T F L D+E+
Sbjct: 832 KKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQ 891

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----------------------- 901
           E KE  L YHSEKLA A+ L +   S++ +   + L                        
Sbjct: 892 ENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILR 951

Query: 902 -ANRFHHLRDGMCPCAD 917
            +NRFHH +DG C C+D
Sbjct: 952 DSNRFHHFQDGECSCSD 968



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 177/701 (25%), Positives = 303/701 (43%), Gaps = 131/701 (18%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG-SLVYARRLFDKMPDRDLISWNSILA 127
           +L G+  H  +   S   D  ++N L++MY +CG SL YA R FD +  ++ +SWNSI++
Sbjct: 120 ILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIIS 179

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC--LSSGYVWASETVHGYA 185
            Y+ +G+         F++F S++   +  +  T   L+     L+   V   E +    
Sbjct: 180 VYSQTGDQRF-----AFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            K G + D FV   LV+ ++K G +  A+ +F+ M+ R+ V    ++       +GEE  
Sbjct: 235 QKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294

Query: 246 HLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAI------------- 286
            LF+D++ S +    ES   +L       +  ++G +   +V  + I             
Sbjct: 295 KLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353

Query: 287 ----------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                           ++  +    + V WN  ++G  Q      A+E + +M R  +  
Sbjct: 354 GLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILP 413

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-- 388
            S T + ++++ A      LGQQIHG +LK G    V V N+L+ +Y++ GC+   R   
Sbjct: 414 GSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIF 473

Query: 389 ------DQFTLASVLRA----SSSLPEGL------------------------------- 407
                 DQ +  S++ A      SLPE +                               
Sbjct: 474 SSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFG 533

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFG 466
            L KQIH  A+K +   ++    ALI  Y + G M   E +F    +  D  TWN+MI G
Sbjct: 534 ELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 593

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           YI +    KAL+L   M  +G+RLD    AT + A   +  L++G ++HA ++++  E D
Sbjct: 594 YIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           + V S ++DMY KCG +  A   FN +P                         ++  M+L
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMP-------------------------LFANMKL 688

Query: 587 SG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDM 637
            G   PD  TF  ++ A S    LE+G +        +  SD + G++        + D+
Sbjct: 689 DGQTPPDHVTFVGVLSACSHAGLLEEGFK------HFESMSDSY-GLAPRIEHFSCMADL 741

Query: 638 YAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEE 677
             + G ++      ++M M+ N ++W  +L G     NG +
Sbjct: 742 LGRAGELDKLEDFIEKMPMKPNVLIWRTVL-GACCRANGRK 781



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 168/676 (24%), Positives = 289/676 (42%), Gaps = 86/676 (12%)

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G+  A++  H    K GL  D ++   L+N Y + G    A+ +FD M  R+ V W  ++
Sbjct: 15  GHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVV 74

Query: 233 RAYAENGFGEEVFHLFVDLHRSGL-------------CPDDESVQCVLG-VISDLGKRHE 278
             Y+ NG  +E      D+ + G+             C + +SV  + G  I  L  +  
Sbjct: 75  SGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLS 134

Query: 279 EQVQA------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
             V A                  YA++        N V WN  +S Y Q GD   A + F
Sbjct: 135 YAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMF 194

Query: 321 VNMIRSNVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            +M     +    TF  LV  A      ++ L +QI  T  KSGF + + VG+ L++ ++
Sbjct: 195 YSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFA 254

Query: 379 KMGCVCGLRT----------------------------------DQFTLASVLRAS---- 400
           K G +   R                                   D  ++  V   S    
Sbjct: 255 KSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314

Query: 401 -SSLPE-------GLHLSKQIHVHAIKNDTVADSF-VSTALIDVYCRNGSMAEAEYLFEN 451
            SS PE       GL   +++H H I    V     +   L+++Y + GS+A+A  +F  
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCF 374

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  +WN+MI G   ++   +A+E +  M          T+ +++ +C  L   K G
Sbjct: 375 MTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLG 434

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q+H  ++K G +L++ VS+ ++ +Y + G + + + IF+ +P  D V+W ++I G + +
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSII-GALAS 493

Query: 572 GEEDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            E  L  A++ +     +G   +  TF+ ++ A S L+  E G+QIH   +K + + +  
Sbjct: 494 SERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEAT 553

Query: 630 VGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
              +L+  Y KCG ++    +F +M + R+ V WN+M+ G   +    + L L   M   
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQT 613

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G   DS  +  VLSA +    +    E  H    +  +E +V   S LVD   + GR   
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDY 672

Query: 749 AGELILSMPFEASASM 764
           A     +MP  A+  +
Sbjct: 673 ALRFFNTMPLFANMKL 688



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 168/368 (45%), Gaps = 6/368 (1%)

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
           C+      K  H+   K+G E D+ + + +++ Y++ G  V A+ +F+++P  + V+W  
Sbjct: 13  CIGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWAC 72

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ--GRQIHANLIK 621
           ++SG   NGE   AL     M   GV  + + F   ++A   L ++    GRQIH  L K
Sbjct: 73  VVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFK 132

Query: 622 LDCSSDPFVGISLVDMYAKC-GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           L  + D  V   L+ MY KC G++  A   F  + ++N+V WN+++   +Q G+     K
Sbjct: 133 LSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFK 192

Query: 681 LFEDMKAHGVEPDSVTFIG-VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           +F  M+  G  P   TF   V +ACS T       E      +K G   ++   S LV A
Sbjct: 193 MFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSA 252

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
             ++G    A ++   M    + +++  ++G  R +   E  K   + + ++      +Y
Sbjct: 253 FAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD-MNSMIDVSPESY 311

Query: 800 VLLSNIFAAANQWDDVTSARG-EMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPDTDFV 858
           V+L + F   +  ++V   +G E+    +     D +     GL+    + G + D   V
Sbjct: 312 VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371

Query: 859 LLDVEEEE 866
              + E++
Sbjct: 372 FCFMTEKD 379



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 128/595 (21%), Positives = 236/595 (39%), Gaps = 127/595 (21%)

Query: 63  AISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           +++  D+ L +     I  S  + D F+ + L++ +++ GSL++AR++F++M  R+ ++ 
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTL 277

Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESI-----TFTSRLTLAPLLKLCLSSGYVWA 177
           N ++        G      E  +LF  +   I     ++   L+  P   L    G    
Sbjct: 278 NGLMVGLVRQKWGE-----EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332

Query: 178 SETVHGYALKIGLVWDEFVSG---ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            E VHG+ +  GLV  +F+ G    LVN+Y+K G I +A+ +F  M E+D V W  M+  
Sbjct: 333 RE-VHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITG 389

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN 293
             +N    E    +  + R  + P   ++   +   + L   +  +Q+   ++KL +   
Sbjct: 390 LDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGI--- 446

Query: 294 NSNVVLWNKKLSGYLQVG------------DNHG--------------------AIECFV 321
           + NV + N  ++ Y + G              H                     A+ CF+
Sbjct: 447 DLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFL 506

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           N +R+  + + +TF   L+AV+      LG+QIHG  LK          N+LI  Y K G
Sbjct: 507 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCG 566

Query: 382 CV--------------------------------------------CGLRTDQFTLASVL 397
            +                                             G R D F  A+VL
Sbjct: 567 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVL 626

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A +S+   L    ++H  +++    +D  V +AL+D+Y + G +  A   F        
Sbjct: 627 SAFASVAT-LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT------ 679

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHA 516
                              + LF++M   G+   D +T    + AC    +L++G + H 
Sbjct: 680 -------------------MPLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HF 719

Query: 517 YAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            +M   + L   +   S + D+  + G +   +     +P  P+ + W T++  C
Sbjct: 720 ESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 774



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%)

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           SC+      +  H+ L K     D ++  +L++ Y + G+   A  +F +M +RN V W 
Sbjct: 12  SCIGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            ++ G +++G  +E L    DM   GV  +   F+  L AC
Sbjct: 72  CVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRAC 112



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 16/119 (13%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + ++L    S + L  G   HA  + +    D  + + L+ MYS+CG L YA R F+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678

Query: 113 KMP-----------DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            MP             D +++  +L+A +H+G      + EGF+ F S+ +S     R+
Sbjct: 679 TMPLFANMKLDGQTPPDHVTFVGVLSACSHAGL-----LEEGFKHFESMSDSYGLAPRI 732


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 219/668 (32%), Positives = 352/668 (52%), Gaps = 57/668 (8%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N  V LWN  ++GY ++G+   ++  F  M    ++          +A    D L     
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRR-------VESARKLFDELGDRDV 216

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           I   ++ SG+ S  +    L +++ +M  + G+ TD  T+ SV+ A  S    L L + +
Sbjct: 217 ISWNSMISGYVSNGLSEKGL-DLFEQM-LLLGINTDLATMVSVV-AGCSNTGMLLLGRAL 273

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H +AIK     +  ++  L+D+Y ++G++  A  +FE      + +W +MI GY     S
Sbjct: 274 HGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLS 333

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             ++ LF  M   G   D  TI T + AC C  +L+ GK +H Y  ++  + DL VS+ +
Sbjct: 334 DMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNAL 393

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +DMY KCG+M DA S+F+++   D V+W TMI G   N   + AL+++ +M+ +   P+ 
Sbjct: 394 MDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNS 452

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            T A ++ A + L ALE+G++IH ++++   S D  V  +LVDMY KCG +  A +LF  
Sbjct: 453 ITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDM 512

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           +  ++ V W  M+ G   HG G E +  F +M+  G+EPD V+FI +L ACS++GL+ E 
Sbjct: 513 IPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
           +  F++MR    IEP+ EHY+ +VD L RAG   +A + I  MP E  A++  ALL  CR
Sbjct: 573 WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCR 632

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
           +  D +  + VAE +  LEP ++  YVLL+NI+A A +W++V   R  + R+ ++K+P  
Sbjct: 633 IYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGC 692

Query: 832 -----------------ADLIFAKVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERA 870
                            +  +  K+E L+K    R+KE G+ P   + L+  ++ EKE A
Sbjct: 693 SWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMA 752

Query: 871 LYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHH 907
           L  HSEK+A A+G++S PP   +   K                           +NRFHH
Sbjct: 753 LCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHH 812

Query: 908 LRDGMCPC 915
            +DG C C
Sbjct: 813 FKDGSCSC 820



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 290/613 (47%), Gaps = 81/613 (13%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L+LC     +     +H       +  D  +   LV +Y   G +RE + +FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
               V LW +++  YA+ G   E   LF  +   G+      V+    +  +LG R    
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI----RRVESARKLFDELGDR---- 214

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                          +V+ WN  +SGY+  G +   ++ F  M+   +  D  T +  +A
Sbjct: 215 ---------------DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------- 384
             + T  L LG+ +HG  +K+ F   + + N L++MYSK G +                 
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319

Query: 385 ---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                                      G+  D FT+ ++L A +     L   K +H + 
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL-LENGKDVHNYI 378

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            +N   +D FVS AL+D+Y + GSM +A  +F      D+ +WN MI GY  ++  ++AL
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEAL 438

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LF  M  +  + + IT+A  + AC  L  L++G+++H + +++GF LD  V++ ++DMY
Sbjct: 439 NLFVEMQYN-SKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 497

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           +KCGA+  A+ +F+ IP  D V+WT MI+G   +G    A++ +++MR SG+ PDE +F 
Sbjct: 498 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFI 557

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A S    L++G     N+++ +C  +P       +VD+ A+ GN+  AY   K M 
Sbjct: 558 SILYACSHSGLLDEGWGFF-NMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP 616

Query: 656 MR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAH--GVEPDSVTFIGVLSACSYTGLVSE 712
           +  +  +W A+L G   + +    +KL E +  H   +EP++  +  VL A  Y    +E
Sbjct: 617 IEPDATIWGALLCGCRIYHD----VKLAEKVAEHVFELEPENTGYY-VLLANIYAE--AE 669

Query: 713 AYENFHLMREKYG 725
            +E    +RE+ G
Sbjct: 670 KWEEVKKLRERIG 682



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 236/584 (40%), Gaps = 140/584 (23%)

Query: 64  ISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS------------------LV 105
           ++  DL  G+    ++ N       FL N LM  Y++ G+                  + 
Sbjct: 147 VTCGDLREGRRIFDKVANEKV----FLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVE 202

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
            AR+LFD++ DRD+ISWNS+++ Y  +G        +G  LF  +      T   T+  +
Sbjct: 203 SARKLFDELGDRDVISWNSMISGYVSNGLSE-----KGLDLFEQMLLLGINTDLATMVSV 257

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           +  C ++G +     +HGYA+K     +  ++  L+++YSK G +  A  +F+ M ER V
Sbjct: 258 VAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 317

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEE 279
           V W  M+  YA  G  +    LF ++ + G+ PD  ++  +L      G++ + GK    
Sbjct: 318 VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN-GKDVHN 376

Query: 280 QVQAYAIKLLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHG 315
            ++   ++  L+ +N+                        ++V WN  + GY +    + 
Sbjct: 377 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNE 436

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  FV M + N + +S+T    L A A    L  GQ+IHG  L++GF     V N+L++
Sbjct: 437 ALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 495

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MY K G + GL    F +         +PE                   D    T +I  
Sbjct: 496 MYLKCGAL-GLARLLFDM---------IPE------------------KDLVSWTVMIAG 527

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y  +G  +E                               A+  F+ M  SG   DE++ 
Sbjct: 528 YGMHGYGSE-------------------------------AIAAFNEMRNSGIEPDEVSF 556

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS------SGILDMYVKCGAMVDAQSI 549
            + + AC    +L +G     +   +    + C+       + I+D+  + G +  A   
Sbjct: 557 ISILYACSHSGLLDEG-----WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKF 611

Query: 550 FNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
              +P  PD   W  ++ GC           IYH ++L+  V +
Sbjct: 612 IKMMPIEPDATIWGALLCGC----------RIYHDVKLAEKVAE 645



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 57  FSILRHAISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
            + + HA + + LL  GK  H  I  +    D F++N LM MY++CGS+  A  +F +M 
Sbjct: 355 ITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQ 414

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +D++SWN+++  Y+ +   N     E   LF  ++ +    S +T+A +L  C S   +
Sbjct: 415 VKDIVSWNTMIGGYSKNSLPN-----EALNLFVEMQYNSKPNS-ITMACILPACASLAAL 468

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +HG+ L+ G   D  V+ ALV++Y K G +  A+ LFD + E+D+V W VM+  Y
Sbjct: 469 ERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY 528

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             +G+G E    F ++  SG+ PD+ S   +L   S  G
Sbjct: 529 GMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSG 567



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 35/323 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    +T  LLLG++ H   + +S   +  L N L+ MYS+ G+L  A ++F+ M +R
Sbjct: 256 SVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER 315

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SW S++A YA  G  +        RLF  + +        T+  +L  C  +G +  
Sbjct: 316 SVVSWTSMIAGYAREGLSDMS-----VRLFHEMEKEGISPDIFTITTILHACACTGLLEN 370

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH Y  +  +  D FVS AL+++Y+K G + +A  +F  MQ +D+V W  M+  Y++
Sbjct: 371 GKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK 430

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG--KRHEE---------------- 279
           N    E  +LFV++  +   P+  ++ C+L   + L   +R +E                
Sbjct: 431 NSLPNEALNLFVEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHV 489

Query: 280 ---------QVQAYAIKLLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                    +  A  +  LL++     ++V W   ++GY   G    AI  F  M  S +
Sbjct: 490 ANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGI 549

Query: 329 QYDSVTFLVALAAVAGTDNLNLG 351
           + D V+F+  L A + +  L+ G
Sbjct: 550 EPDEVSFISILYACSHSGLLDEG 572



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 51/315 (16%)

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  +N  I  +    N  +A+EL +   +    L+  T  + ++ C  L  ++ G+++H+
Sbjct: 68  ITDYNIEICRFCELGNLRRAMELINQ--SPKPDLELRTYCSVLQLCADLKSIQDGRRIHS 125

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVD------------------------------- 545
               +  E+D  + S ++ MYV CG + +                               
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185

Query: 546 ------------------AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
                             A+ +F+++   D ++W +MISG V NG  +  L ++ QM L 
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+  D  T   +V   S    L  GR +H   IK     +  +   L+DMY+K GN+  A
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSA 305

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F+ M  R+ V W +M+ G A+ G  + +++LF +M+  G+ PD  T   +L AC+ T
Sbjct: 306 IQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACT 365

Query: 708 GLVSEAYENFHLMRE 722
           GL+    +  + ++E
Sbjct: 366 GLLENGKDVHNYIKE 380



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 18/227 (7%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           +LP+ +L+L   +Q   ++S  +S     IL    S + L  G+  H  IL +    DR 
Sbjct: 432 SLPNEALNLFVEMQ---YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRH 488

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N L+ MY +CG+L  AR LFD +P++DL+SW  ++A Y   G G     +E    F  
Sbjct: 489 VANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYG-----SEAIAAFNE 543

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYV---WASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +R S      ++   +L  C  SG +   W    +      I    + +    +V++ ++
Sbjct: 544 MRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHY--ACIVDLLAR 601

Query: 207 FGKIREA-KFLFDGMQERDVVLWKVML---RAYAENGFGEEVF-HLF 248
            G + +A KF+     E D  +W  +L   R Y +    E+V  H+F
Sbjct: 602 AGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVF 648


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 255/880 (28%), Positives = 426/880 (48%), Gaps = 103/880 (11%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           A++LFD  P+RD+ISW++++AAY+  G     N  + F LF+ +       +  +LA LL
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCG-----NFAQAFGLFQKMMGEGLQPNGFSLASLL 128

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD--GMQERD 224
           K+  S+G +     +HG++++ G   D  +  A + +YS+ G + +A+ +FD   +   D
Sbjct: 129 KVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALD 188

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           ++LW  ++ AY  +G   EV  LF  +   G+    E       V++  G   EE+  A 
Sbjct: 189 ILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYA--SVVNACGSSGEEKYGAM 246

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
               ++        LWN  ++ Y + G+   A + F  + R +V    V++   +AA   
Sbjct: 247 VHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDV----VSWNAMIAA--- 299

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-CGLRTDQFTLASVLRASSSL 403
             N   G+                 G + + ++ +M  V   ++ ++ T  S+L A S L
Sbjct: 300 --NEQRGE-----------------GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGL 340

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L   ++IH H  +     D+ ++ +LI  Y +   + +A  +FE     D+ +WN+M
Sbjct: 341 -SALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSM 399

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDE----ITIATAVKACGCLLMLKQGKQMHAYAM 519
           + GY  +    +  ++F  M  SG   D     I    A +    L+  ++GK++H Y +
Sbjct: 400 LAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYIL 459

Query: 520 K--SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           +  +   + L VS+ IL MY K   + DA+ IF  +   D  +W  M+ G   N + +  
Sbjct: 460 RRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDV 519

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL----DCS-SDPFVGI 632
           L I+  +   G   D  + +IL+ +   L +L+ G+Q HA + KL    DC   D  + I
Sbjct: 520 LMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSI 579

Query: 633 --SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +L+ MY+KCG+I+DA  +F +M+ ++   W AM+ G A HG   E L+LFE MK  G+
Sbjct: 580 NNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGI 639

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +P+ VTF+ +L AC++ GLV E    F  M   YG+ P +EHY+ ++D  GR+G+   A 
Sbjct: 640 KPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAK 699

Query: 751 ELI-----LSMPFEASA-SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
            L+     L  P+     ++ + LLGAC      + G   A K++ LEP D + Y+LL+N
Sbjct: 700 SLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLAN 759

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKD----------------PADL-------IFAKVEG 841
           ++A++  W+D    R  M+ K ++K+                  D+       I+ K+  
Sbjct: 760 LYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQ 819

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI---------------- 885
           L    +  GYVP T+ VL DV+E EKE  L  HSEKLA ++GL+                
Sbjct: 820 LNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLR 879

Query: 886 ------STPPSSVILSNKEPLY--ANRFHHLRDGMCPCAD 917
                 S    + +L  +E L   + RFH  RDG C C D
Sbjct: 880 VCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGD 919



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 157/649 (24%), Positives = 266/649 (40%), Gaps = 124/649 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK--MP 115
           S+L+ + ST ++ L +  H   + +    D  +    +TMYSRCG L  A+R+FD+  + 
Sbjct: 126 SLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLL 185

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGY 174
             D++ WNSI+AAY   G        E  RLF + +   +   + LT A ++  C SSG 
Sbjct: 186 ALDILLWNSIIAAYIFHG-----CWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGE 240

Query: 175 VWASETVHGYALKIGL----VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                 VHG  +K GL    +W+     +LV  Y K G ++ A  LF+ +  +DVV W  
Sbjct: 241 EKYGAMVHGRIIKAGLEATNLWN-----SLVTFYGKCGNLQHASQLFERISRKDVVSWNA 295

Query: 231 MLRAYAENGFGEEVFHLFVDLHR--SGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
           M+ A  + G GE    LF  + +    + P+  +   +L  +S L   R   ++ A+  +
Sbjct: 296 MIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFR 355

Query: 288 LLLYNNNS----------------------------NVVLWNKKLSGYLQVGDNHGAIEC 319
           L L  + S                            +++ WN  L+GY Q        + 
Sbjct: 356 LSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDI 415

Query: 320 FVNMIRSNVQYDSVTFLVALAAV----AGTDNLNLGQQIHGTTLKSGFYSAV--IVGNSL 373
           F  M+ S ++ DS +  +   A     +G      G++IHG  L+      V   V N++
Sbjct: 416 FKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAI 475

Query: 374 INMYSKMGCVC-------------------------------------------GLRTDQ 390
           + MY+K   +                                            G   D 
Sbjct: 476 LKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDH 535

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIK-----NDTVADSFVS--TALIDVYCRNGSMA 443
            +L S+L  S      L L KQ H    K     +    DS +S   ALI +Y + GS+ 
Sbjct: 536 VSL-SILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIK 594

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A  +F   +  D+ +W AMI G      + +AL+LF  M T G + +++T    + AC 
Sbjct: 595 DAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACA 654

Query: 504 CLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-----DI 553
              ++++G        + Y +    E   C    ++D++ + G    A+S+         
Sbjct: 655 HGGLVQEGSYYFDSMYNDYGLSPSIEHYAC----MIDLFGRSGQFDRAKSLVEFGITLFK 710

Query: 554 PAPDDV--AWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAIL 599
           P  DD+   W  ++  C  +  + L L +    ++  + P DE T+ +L
Sbjct: 711 PYHDDILNLWKVLLGAC--HASKQLDLGVEAATKILELEPEDEATYILL 757



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 36/294 (12%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S+L      S L  G+  HA I   S   D  +TN+L+T YS+C  +  AR +F+++ 
Sbjct: 330 FLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLL 389

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL--SSG 173
            RD+ISWNS+LA Y  +     E     F +F+ +  S       +L  +       SSG
Sbjct: 390 LRDIISWNSMLAGYEQN-----EQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSG 444

Query: 174 YVW--ASETVHGYALK------IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
            ++    + +HGY L+      + L     VS A++ +Y+KF +I +A+ +F GM+ RD 
Sbjct: 445 LIYFRRGKEIHGYILRRITPGGVSLS----VSNAILKMYAKFNRIADAEKIFKGMKNRDS 500

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG-----VISDLGKRHEEQ 280
             W  M+  Y+ N   E+V  +F+D+ + G   D  S+  +L      V   LGK     
Sbjct: 501 YSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGK----- 555

Query: 281 VQAYAIKLLLYN------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            Q +A+   L+N       +S + + N  +S Y + G    A + F+ M R +V
Sbjct: 556 -QFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDV 608


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 243/782 (31%), Positives = 360/782 (46%), Gaps = 150/782 (19%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA+ +L     S  V WN  +  +++ G    AI     M+R+  + D  T    L A  
Sbjct: 114 YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACG 173

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM--------------------------- 376
              +   G   HG    +GF S V + N+L+ M                           
Sbjct: 174 ELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVIS 233

Query: 377 --------------------YSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSK 411
                               +SKM  +        R+D  ++ ++L A  SL + +  +K
Sbjct: 234 WNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-KAVPQTK 292

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H +AI+N T  D FV  ALID Y + G M  A  +F   +  D+ +WNAM+ GY  S 
Sbjct: 293 EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 352

Query: 472 N-----------------------------------SHKALELFSHMHTSGERLDEITIA 496
           N                                   SH+AL LF  M  SG   + +TI 
Sbjct: 353 NFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTII 412

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKS----------GFELDLCVSSGILDMYVKCGAMVDA 546
           + + AC  L    QG ++HAY++K+          G + DL V + ++DMY KC +   A
Sbjct: 413 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 472

Query: 547 QSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKA 602
           +SIF+DIP  +   V WT MI G    G+ + AL ++ +M     GV P+ +T + ++ A
Sbjct: 473 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 532

Query: 603 SSCLTALEQGRQIHANLIKLDC--SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            + L A+  G+QIHA +++     SS  FV   L+DMY+KCG+++ A  +F  M  ++ +
Sbjct: 533 CAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAI 592

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +M+ G   HG G E L +F+ M+  G  PD +TF+ VL ACS+ G+V +    F  M
Sbjct: 593 SWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSM 652

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
              YG+ P  EHY+  +D L R+GR  +A   +  MP E +A +  ALL ACRV  + E 
Sbjct: 653 SADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVEL 712

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
            +    KL+ +   +  +Y L+SNI+A A +W DV   R  MK+  +KK P         
Sbjct: 713 AEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQK 772

Query: 832 --------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                         +  I+A +E LI RIK  GYVP+T+F L DV+EEEK   L  HSEK
Sbjct: 773 GTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEK 832

Query: 878 LARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCP 914
           LA AYGL++T P   I   K                            +RFHH ++G C 
Sbjct: 833 LALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCS 892

Query: 915 CA 916
           C 
Sbjct: 893 CG 894



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 244/575 (42%), Gaps = 111/575 (19%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G + H  I  +    + F+ N L+ MYSRCGSL  A  +FD++  R   D+ISWNSI++A
Sbjct: 181 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 240

Query: 129 YAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           +  S     A ++     L    + +   +  +++  +L  C S   V  ++ VHG A++
Sbjct: 241 HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 300

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   D FV  AL++ Y+K G +  A  +F+ M+ +DVV W  M+  Y+++G  E  F L
Sbjct: 301 NGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFEL 360

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F ++ +  +  D                                     VV W   ++GY
Sbjct: 361 FKNMRKENIPLD-------------------------------------VVTWTAVIAGY 383

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS------ 361
            Q G +H A+  F  MI S    + VT +  L+A A     + G +IH  +LK+      
Sbjct: 384 SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 443

Query: 362 ----GFYSAVIVGNSLINMYSKMGCVCGLRT----------------------------- 388
               G    ++V N+LI+MYSK       R+                             
Sbjct: 444 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 503

Query: 389 ------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS--FV 428
                             + +T++ +L A + L   + + KQIH + +++     S  FV
Sbjct: 504 DALKLFVEMISEPYGVAPNAYTISCILMACAHL-AAIRIGKQIHAYVLRHHRYESSAYFV 562

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +  LID+Y + G +  A ++F++       +W +M+ GY +     +AL++F  M  +G 
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 622

Query: 489 RLDEITIATAVKACGCLLMLKQG----KQMHA-YAMKSGFELDLCVSSGILDMYVKCGAM 543
             D+IT    + AC    M+ QG      M A Y +    E   C     +D+  + G +
Sbjct: 623 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA----IDLLARSGRL 678

Query: 544 VDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             A     D+P  P  V W  ++S C  +   +LA
Sbjct: 679 DKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELA 713



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 9/302 (2%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           + T ++  Y   G+   A  + E         WN +I  +I       A+ +   M  +G
Sbjct: 98  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R D  T+   +KACG L   + G   H     +GFE ++ + + ++ MY +CG++ +A 
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217

Query: 548 SIFNDIPA---PDDVAWTTMISGCVDNGEEDLALSIYHQMRL------SGVVPDEFTFAI 598
            IF++I      D ++W +++S  V +     AL ++ +M L      +    D  +   
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A   L A+ Q +++H N I+     D FVG +L+D YAKCG +E+A  +F  M+ ++
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V WNAM+ G +Q GN E   +LF++M+   +  D VT+  V++  S  G   EA   F 
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397

Query: 719 LM 720
            M
Sbjct: 398 QM 399



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 10/251 (3%)

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + +G++  Y+ CGA   A  +   +     V W  +I   +  G  D A+++  +M  +G
Sbjct: 98  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
             PD FT   ++KA   L +   G   H  +      S+ F+  +LV MY++CG++E+A 
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217

Query: 649 ILFKQMDMR---NTVLWNAMLVGLAQHGNGEETLKLFEDM------KAHGVEPDSVTFIG 699
           ++F ++  R   + + WN+++    +  N    L LF  M      K      D ++ + 
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           +L AC     V +  E  H    + G  P+V   + L+DA  + G  + A ++   M F+
Sbjct: 278 ILPACGSLKAVPQTKE-VHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 336

Query: 760 ASASMHRALLG 770
              S +  + G
Sbjct: 337 DVVSWNAMVAG 347


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 223/711 (31%), Positives = 355/711 (49%), Gaps = 97/711 (13%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           + WN  ++   + GD  G+I  F  M+ S V+ DS TF     + +   ++N G+Q+HG 
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGY 220

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
            LKSGF     VGNSL+  Y K   V                                  
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G+  D  T+ SV  A  +    + L + +H   +K     +      L+D
Sbjct: 281 LSVFVQMLFSGIEIDLATIVSVF-AGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G +  A+ +F    G  + ++ +MI GY     + +A++LF  M   G   D  T
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +   +  C    +L +GK++H +  ++    D+ VS+ ++DMY KCG+M +A+ +F+++ 
Sbjct: 400 VTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYH----QMRLSGVVPDEFTFAILVKASSCLTALE 610
             D ++W T+I G   N   + ALS+++    + R S   PDE T A ++ A + L+A +
Sbjct: 460 VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFS---PDERTVACVLPACASLSAFD 516

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +GR+IH  +++    SD  V  SLVDMYAKCG +  A +LF  +  ++ V W  M+ G  
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYG 576

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG G+E + LF  M+  G+EPD ++F+ +L ACS++GLV E +  F++MR +  IEP V
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +VD L R G   +A   I +MP    A++  ALL  CR+  D +  + VAEK+  
Sbjct: 637 EHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFE 696

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           LEP ++  YVL++NI+A A +W++V   R  + ++ ++K+P                   
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                + I A + G+  R+ E GY P T + L+D EE EKE AL  HSEKLA A G+IS+
Sbjct: 757 SNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
               +I                     L+ +E +   +NRFH  +DG C C
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 196/678 (28%), Positives = 323/678 (47%), Gaps = 57/678 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+    +  L  GK     I  +  + D  L + L  MY+ CG L  A R+FD++   
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIE 158

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             + WN ++   A SG+      +    LF+ +  S       T + + K   S   V  
Sbjct: 159 KALFWNILMNELAKSGD-----FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNG 213

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +HGY LK G      V  +LV  Y K  ++  A+ +FD M ERDV+ W  ++  Y  
Sbjct: 214 GEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLLLYN 292
           NG  E+   +FV +  SG+  D  ++  V    +D     LG+     V  + +K     
Sbjct: 274 NGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGR----AVHCFGVKACFSR 329

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLG 351
            +      N  L  Y + GD   A   F  M  RS V Y S+    A   +AG + + L 
Sbjct: 330 EDR---FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAG-EAVKLF 385

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           +++    +    Y+   V N            C  R            +  L EG    K
Sbjct: 386 EEMEEEGISPDVYTVTAVLN------------CCAR------------NRLLDEG----K 417

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H    +ND   D FVS AL+D+Y + GSM EAE +F      D+ +WN +I GY  + 
Sbjct: 418 RVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477

Query: 472 NSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +++AL LF+ +        DE T+A  + AC  L    +G+++H Y M++G+  D  V+
Sbjct: 478 YANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++DMY KCGA++ A+ +F+DI + D V+WT MI+G   +G    A+++++QMR +G+ 
Sbjct: 538 NSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAY 648
           PDE +F  L+ A S    +++G +   N+++ +C  +P V     +VDM A+ GN+  AY
Sbjct: 598 PDEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGNLSKAY 656

Query: 649 ILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
              + M +  +  +W A+L G   H + +   ++ E  K   +EP++  +  VL A  Y 
Sbjct: 657 RFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAE--KVFELEPENTGYY-VLMANIYA 713

Query: 708 GLVSEAYENFHLMREKYG 725
              +E +E    +R++ G
Sbjct: 714 E--AEKWEEVKRLRKRIG 729



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 186/371 (50%), Gaps = 11/371 (2%)

Query: 389 DQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           D  TL SVL+    S SL +G    K++      N  V DS + + L  +Y   G + EA
Sbjct: 93  DPRTLCSVLQLCADSKSLKDG----KEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEA 148

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+         WN ++     S +   ++ LF  M +SG  +D  T +   K+   L
Sbjct: 149 SRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             +  G+Q+H Y +KSGF     V + ++  Y+K   +  A+ +F+++   D ++W ++I
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSII 268

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G V NG  +  LS++ QM  SG+  D  T   +    +    +  GR +H   +K   S
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            +     +L+DMY+KCG+++ A ++F++M  R+ V + +M+ G A+ G   E +KLFE+M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK-YGIEPEVEHYSFLVDALGRAG 744
           +  G+ PD  T   VL+ C+   L+ E       ++E   G +  V +   L+D   + G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNA--LMDMYAKCG 446

Query: 745 RTKEAGELILS 755
             +EA EL+ S
Sbjct: 447 SMREA-ELVFS 456



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 129/252 (51%), Gaps = 4/252 (1%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           N  +  +  S N   A++L   +H SG+  +D  T+ + ++ C     LK GK++  +  
Sbjct: 65  NTQLRRFCESGNLKNAVKL---LHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
            +GF LD  + S +  MY  CG + +A  +F+ +     + W  +++    +G+   ++ 
Sbjct: 122 GNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIG 181

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           ++ +M  SGV  D +TF+ + K+ S L ++  G Q+H  ++K        VG SLV  Y 
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYL 241

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           K   ++ A  +F +M  R+ + WN+++ G   +G  E+ L +F  M   G+E D  T + 
Sbjct: 242 KNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301

Query: 700 VLSACSYTGLVS 711
           V + C+ + L+S
Sbjct: 302 VFAGCADSRLIS 313



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 15/219 (6%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
            +   ++K+ Y N  + SL  L  ++K  FS    +     +L    S S    G+  H 
Sbjct: 468 TVIGGYSKNCYAN-EALSLFNLLLVEK-RFSPDERTVA--CVLPACASLSAFDKGREIHG 523

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
            I+ +    DR + N+L+ MY++CG+L+ AR LFD +  +DL+SW  ++A Y   G G  
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGK- 582

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV---WASETVHGYALKIGLVWDE 194
               E   LF  +R++      ++   LL  C  SG V   W    +  +  KI    + 
Sbjct: 583 ----EAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
           +    +V++ ++ G + +A    + M    D  +W  +L
Sbjct: 639 Y--ACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALL 675


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/582 (36%), Positives = 331/582 (56%), Gaps = 52/582 (8%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L  D+     +L+  + L + L   K +H H + +    D  +  +++ +Y + GS+  A
Sbjct: 87  LEPDRTIYNKLLKRCTMLGK-LKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIA 145

Query: 446 EYLFENKDGFDLATWNAMIFGYI---LSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             +F+     D+ TW +MI GY     ++++  AL LF  M   G R +E  +++ VK C
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           G L     GKQ+H    K GF+ ++ V S ++DMY +CG + +++ +F+++ + ++V+W 
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            +ISG    GE + AL ++ +M+  G    EFT++ L+ +SS   +LEQG+ +HA+++K 
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
                 +VG +L+ MYAK GNI DA  +F ++   + V  N+ML+G AQHG G+E ++LF
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF 385

Query: 683 EDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           E+M     +EP+ +TF+ VL+ACS+ GL+ E    F LM+ KYG+EP++ HY+ +VD  G
Sbjct: 386 EEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK-KYGLEPKLSHYTTVVDLFG 444

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG   +A   I  MP E +A++  ALLGA ++  +TE G + A+K++ L+PF   A+ L
Sbjct: 445 RAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTL 504

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LSNI+A+A QW DV   R EMK   +KK+PA                       + ++  
Sbjct: 505 LSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEM 564

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
            E L ++IKE GYVPDT  V + V+++EKE  L YHSEKLA A+ L++T P SVI     
Sbjct: 565 WENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKN 624

Query: 894 ----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                           +  +E +    NRFHH RDG C C D
Sbjct: 625 IRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRD 666



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 139/257 (54%), Gaps = 4/257 (1%)

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           L+ NS   L +   ++      D       +K C  L  LKQGK +H + M S F  DL 
Sbjct: 68  LNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLV 127

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG---EEDLALSIYHQMR 585
           + + IL MY KCG++  A+ +F+++   D V WT+MI+G   +G       AL ++ +M 
Sbjct: 128 IKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMV 187

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
             G+ P+EF  + LVK    L +   G+QIH    K     + FVG SLVDMYA+CG + 
Sbjct: 188 RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELR 247

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           ++ ++F +++ +N V WNA++ G A+ G GEE L LF  M+  G      T+  +L + S
Sbjct: 248 ESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSS 307

Query: 706 YTGLVSEA-YENFHLMR 721
            TG + +  + + H+M+
Sbjct: 308 TTGSLEQGKWLHAHMMK 324



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 32/353 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+       L  GK  H  ++NS    D  + N+++ MY++CGSL  AR++FD+M  +D
Sbjct: 97  LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           +++W S++  Y  S +G A + T    LF  +       +   L+ L+K C   G     
Sbjct: 157 VVTWTSMITGY--SQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDG 214

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +HG   K G   + FV  +LV++Y++ G++RE++ +FD ++ ++ V W  ++  +A  
Sbjct: 215 KQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARK 274

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN 293
           G GEE   LFV + R G    + +   +L   S     + GK     +     KL+ Y  
Sbjct: 275 GEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVG 334

Query: 294 NS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVN-MIRSNV 328
           N+                        +VV  N  L GY Q G    A+E F   M+   +
Sbjct: 335 NTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEI 394

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           + + +TFL  L A +    L+ G        K G    +    ++++++ + G
Sbjct: 395 EPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAG 447



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/460 (21%), Positives = 183/460 (39%), Gaps = 91/460 (19%)

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           N T G  +   +        R     LLK C   G +   + VH + +      D  +  
Sbjct: 71  NSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKN 130

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE---VFHLFVDLHRSG 255
           +++ +Y+K G +  A+ +FD M  +DVV W  M+  Y+++G+         LF+++ R G
Sbjct: 131 SILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDG 190

Query: 256 LCPDDES----VQCV--LGVISDLGKRH--------EEQVQAYAIKLLLYNN-------- 293
           L P++ +    V+C   LG   D  + H        +E V   +  + +Y          
Sbjct: 191 LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESR 250

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                  + N V WN  +SG+ + G+   A+  FV M R        T+   L + + T 
Sbjct: 251 LVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTG 310

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           +L  G+ +H   +KSG      VGN+L++MY+K G +C                      
Sbjct: 311 SLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICD--------------------- 349

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
              +K++    +K D V+      +++  Y ++G   EA  LFE     ++  W  +   
Sbjct: 350 ---AKKVFDRLVKVDVVS----CNSMLIGYAQHGLGKEAVELFE-----EMMLWVEI--- 394

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
                                   ++IT  + + AC    +L +G        K G E  
Sbjct: 395 ----------------------EPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPK 432

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
           L   + ++D++ + G +  A+S   ++P  P+   W  ++
Sbjct: 433 LSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 11/203 (5%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L L   +Q+  F ++  +  + ++L  + +T  L  GK  HA ++ S +    ++ N L
Sbjct: 280 ALGLFVKMQREGFGATEFT--YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTL 337

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN-AENVTEGFRLFRSLRES 153
           + MY++ G++  A+++FD++   D++S NS+L  YA  G G  A  + E   L+  +  +
Sbjct: 338 LHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPN 397

Query: 154 -ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
            ITF S LT      L L  G ++  E +  Y L+  L    + +  +V+++ + G + +
Sbjct: 398 DITFLSVLTACSHAGL-LDEG-LYYFELMKKYGLEPKL--SHYTT--VVDLFGRAGLLDQ 451

Query: 213 AKFLFDGMQ-ERDVVLWKVMLRA 234
           AK   + M  E +  +W  +L A
Sbjct: 452 AKSFIEEMPIEPNATIWGALLGA 474


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 227/770 (29%), Positives = 370/770 (48%), Gaps = 79/770 (10%)

Query: 141  TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
            ++   L      S   T++ T   LLK C S   ++   T+H   + +GL  D +++ +L
Sbjct: 423  SQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSL 482

Query: 201  VNIYSKFGKIREAKFLFDGMQER-----DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
            +N+Y K G +  A  +FD M E      D+ +W  ++  Y + G  EE    F  +   G
Sbjct: 483  INMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELG 542

Query: 256  LCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLL------------------------ 290
            + PD  S+  VLG+ + L       Q+  Y I+ +                         
Sbjct: 543  IRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAW 602

Query: 291  -----YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
                   N SN+V WN  + G+++ G    ++E +      N +  S +F  A  A +  
Sbjct: 603  SLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHG 662

Query: 346  DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------- 383
            + L+ G+Q+H   +K  F     V  SL+ MY+K G V                      
Sbjct: 663  EVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMI 722

Query: 384  ------------CGL---------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
                         GL           D FT++S+L +  S+       + +H   IK   
Sbjct: 723  SAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLL-SGCSVVGSYDFGRTVHAEVIKRSM 781

Query: 423  VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             ++  + +AL+ +Y + GS  +A+ +F      D+  W +MI G+  +     AL+LF  
Sbjct: 782  QSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRA 841

Query: 483  MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
            M   G + D   + + + A   L  ++ G  +H +A+K G E D+ V+  ++DMY K G 
Sbjct: 842  MEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGF 901

Query: 543  MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
               A+ +F+ +P  + VAW +MIS    NG  ++++++  Q+   G   D  +   ++ A
Sbjct: 902  AESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVA 961

Query: 603  SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
             S + AL +G+ +HA  I+L   SD  V  +L+DMY KCG ++ A ++F+ M  RN V W
Sbjct: 962  VSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTW 1021

Query: 663  NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
            N+M+ G   HGN EE ++LF++MK     PD VTF+ ++++CS++G+V E    F LMR 
Sbjct: 1022 NSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRI 1081

Query: 723  KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            +YG+EP +EHY+ +VD LGRAGR  +A   I  MP +A  S+   LL ACR   + E G+
Sbjct: 1082 EYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGE 1141

Query: 783  WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             VA+ L+ +EP   S YV L N++     WD   + R  MK + +KK P 
Sbjct: 1142 LVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPG 1191



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 225/510 (44%), Gaps = 61/510 (11%)

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
           +++   +Q G    A+E       S +     TF   L   A   NL  G+ IH + +  
Sbjct: 411 EEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTM 470

Query: 362 GFYSAVIVGNSLINMYSKMGCV-------------------------------------- 383
           G  S   +  SLINMY K G +                                      
Sbjct: 471 GLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEE 530

Query: 384 ----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      G+R D ++L+ VL   + L   +   +QIH + I+N    D ++ TALI
Sbjct: 531 GLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMA-GRQIHGYIIRNMFEGDPYLETALI 589

Query: 434 DVYCRNGSMAEAEYLF---ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            +Y       EA  LF   EN+   ++  WN MI G++ +    K+LEL+S       +L
Sbjct: 590 GMYSSCSRPMEAWSLFGKLENRS--NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 647

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
              +   A  AC    +L  G+Q+H   +K  F+ D  V + +L MY K G++ DA+ +F
Sbjct: 648 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 707

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   +      MIS  + NG    AL +Y++M+      D FT + L+   S + + +
Sbjct: 708 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 767

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            GR +HA +IK    S+  +  +L+ MY KCG+ EDA  +F  M  R+ V W +M+ G  
Sbjct: 768 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 827

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE---KYGIE 727
           Q+   ++ L LF  M+  GV+ DS     V+SA    GL  E  E  HL+     K G+E
Sbjct: 828 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISA----GLGLENVELGHLIHGFAIKRGLE 883

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +V     LVD   + G  + A  +  SMP
Sbjct: 884 SDVFVACSLVDMYSKFGFAESAEMVFSSMP 913



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 41/312 (13%)

Query: 486 SGERLDEI-----TIATAVKACGCLLMLKQG---KQMHAYAMKSGFELDLCVSSGILDMY 537
           SGE+LD+I      +A  V   G ++ L Q    K     A+    + +L     +L++ 
Sbjct: 346 SGEKLDDILGSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKKAVLELM 405

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
                         ++P  ++      I   V  G+   AL ++ +   S +   +FTF 
Sbjct: 406 --------------NLPQVEE------IKALVQQGKYSQALELHSKTPHSALTTAKFTFP 445

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM--- 654
            L+K  + L+ L  GR IHA+++ +   SDP++  SL++MY KCG +  A  +F +M   
Sbjct: 446 SLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSES 505

Query: 655 --DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
                +  +WN ++ G  ++G+ EE L  F  M+  G+ PD  +   VL  C+       
Sbjct: 506 RDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMA 565

Query: 713 AYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
             + + +++R  +  +P +E  + L+       R  EA  L   +   ++      ++G 
Sbjct: 566 GRQIHGYIIRNMFEGDPYLE--TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG- 622

Query: 772 CRVQGDTETGKW 783
               G  E G W
Sbjct: 623 ----GFVENGMW 630


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 244/785 (31%), Positives = 362/785 (46%), Gaps = 156/785 (19%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA+ +L     S  V WN  +  +++ G    AI     M+R+  + D  T    L A  
Sbjct: 107 YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACG 166

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM--------------------------- 376
              +   G   HG    +GF S V + N+L+ M                           
Sbjct: 167 ELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVIS 226

Query: 377 --------------------YSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSK 411
                               +SKM  +        R+D  ++ ++L A  SL + +  +K
Sbjct: 227 WNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-KAVPQTK 285

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H +AI+N T  D FV  ALID Y + G M  A  +F   +  D+ +WNAM+ GY  S 
Sbjct: 286 EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 345

Query: 472 N-----------------------------------SHKALELFSHMHTSGERLDEITIA 496
           N                                   SH+AL LF  M  SG   + +TI 
Sbjct: 346 NFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTII 405

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKS----------GFELDLCVSSGILDMYVKCGAMVDA 546
           + + AC  L    QG ++HAY++K+          G + DL V + ++DMY KC +   A
Sbjct: 406 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 465

Query: 547 QSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKA 602
           +SIF+DIP  +   V WT MI G    G+ + AL ++ +M     GV P+ +T + ++ A
Sbjct: 466 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 525

Query: 603 SSCLTALEQGRQIHANLIKLDC--SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            + L A+  G+QIHA +++     SS  FV   L+DMY+KCG+++ A  +F  M  ++ +
Sbjct: 526 CAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAI 585

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +M+ G   HG G E L +F+ M+  G  PD +TF+ VL ACS+ G+V +    F  M
Sbjct: 586 SWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSM 645

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
              YG+ P  EHY+  +D L R+GR  +A   +  MP E +A +  ALL ACRV  + E 
Sbjct: 646 SADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVEL 705

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
            +    KL+ +   +  +Y L+SNI+A A +W DV   R  MK+  +KK P         
Sbjct: 706 AEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQK 765

Query: 832 --------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                         +  I+A +E LI RIK  GYVP+T+F L DV+EEEK   L  HSEK
Sbjct: 766 GTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEK 825

Query: 878 LARAYGLISTPPSSVILSNK--------------------------EPLYANRFHHLRDG 911
           LA AYGL++T P   I   K                          +P   +RFHH ++G
Sbjct: 826 LALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDP---SRFHHFKNG 882

Query: 912 MCPCA 916
            C C 
Sbjct: 883 SCSCG 887



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 244/575 (42%), Gaps = 111/575 (19%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G + H  I  +    + F+ N L+ MYSRCGSL  A  +FD++  R   D+ISWNSI++A
Sbjct: 174 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 233

Query: 129 YAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           +  S     A ++     L    + +   +  +++  +L  C S   V  ++ VHG A++
Sbjct: 234 HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 293

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   D FV  AL++ Y+K G +  A  +F+ M+ +DVV W  M+  Y+++G  E  F L
Sbjct: 294 NGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFEL 353

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F ++ +  +  D                                     VV W   ++GY
Sbjct: 354 FKNMRKENIPLD-------------------------------------VVTWTAVIAGY 376

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS------ 361
            Q G +H A+  F  MI S    + VT +  L+A A     + G +IH  +LK+      
Sbjct: 377 SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 436

Query: 362 ----GFYSAVIVGNSLINMYSKMGCVCGLRT----------------------------- 388
               G    ++V N+LI+MYSK       R+                             
Sbjct: 437 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 496

Query: 389 ------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS--FV 428
                             + +T++ +L A + L   + + KQIH + +++     S  FV
Sbjct: 497 DALKLFVEMISEPYGVAPNAYTISCILMACAHL-AAIRIGKQIHAYVLRHHRYESSAYFV 555

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +  LID+Y + G +  A ++F++       +W +M+ GY +     +AL++F  M  +G 
Sbjct: 556 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 615

Query: 489 RLDEITIATAVKACGCLLMLKQG----KQMHA-YAMKSGFELDLCVSSGILDMYVKCGAM 543
             D+IT    + AC    M+ QG      M A Y +    E   C     +D+  + G +
Sbjct: 616 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA----IDLLARSGRL 671

Query: 544 VDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             A     D+P  P  V W  ++S C  +   +LA
Sbjct: 672 DKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELA 706



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 9/302 (2%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           + T ++  Y   G+   A  + E         WN +I  +I       A+ +   M  +G
Sbjct: 91  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R D  T+   +KACG L   + G   H     +GFE ++ + + ++ MY +CG++ +A 
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210

Query: 548 SIFNDIPA---PDDVAWTTMISGCVDNGEEDLALSIYHQMRL------SGVVPDEFTFAI 598
            IF++I      D ++W +++S  V +     AL ++ +M L      +    D  +   
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A   L A+ Q +++H N I+     D FVG +L+D YAKCG +E+A  +F  M+ ++
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V WNAM+ G +Q GN E   +LF++M+   +  D VT+  V++  S  G   EA   F 
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390

Query: 719 LM 720
            M
Sbjct: 391 QM 392



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 10/251 (3%)

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + +G++  Y+ CGA   A  +   +     V W  +I   +  G  D A+++  +M  +G
Sbjct: 91  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
             PD FT   ++KA   L +   G   H  +      S+ F+  +LV MY++CG++E+A 
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210

Query: 649 ILFKQMDMR---NTVLWNAMLVGLAQHGNGEETLKLFEDM------KAHGVEPDSVTFIG 699
           ++F ++  R   + + WN+++    +  N    L LF  M      K      D ++ + 
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           +L AC     V +  E  H    + G  P+V   + L+DA  + G  + A ++   M F+
Sbjct: 271 ILPACGSLKAVPQTKE-VHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 329

Query: 760 ASASMHRALLG 770
              S +  + G
Sbjct: 330 DVVSWNAMVAG 340


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 217/638 (34%), Positives = 335/638 (52%), Gaps = 74/638 (11%)

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S++  +   F   L +    ++L+LG+Q+H   + SG  S   + N L+N+YSK    CG
Sbjct: 46  SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSK----CG 101

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
                 TL  V+      P    +S  I                  LI+ Y R+G    A
Sbjct: 102 QLDTAITLFGVM------PRKNIMSCNI------------------LINGYFRSGDWVTA 137

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     ++ATWNAM+ G I    + + L LFS M+  G   DE  + + ++ C  L
Sbjct: 138 RKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGL 197

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L  G+Q+H Y  K GFE +L V S +  MY+KCG++ + + +   +P+ + VAW T+I
Sbjct: 198 RALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLI 257

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G   NG  +  L  Y+ M+++G  PD+ TF  ++ + S L  L QG+QIHA +IK   S
Sbjct: 258 AGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGAS 317

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
               V  SL+ MY++CG +E +  +F + +  + V W++M+     HG G E + LF  M
Sbjct: 318 LIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQM 377

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +   +E + VTF+ +L ACS+ GL  +  + F LM EKYG++P +EHY+ +VD LGR G 
Sbjct: 378 EQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGS 437

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
            +EA  LI SMP +A     + LL AC++   TE  + ++E++  L+P D   YVLLSNI
Sbjct: 438 VEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNI 497

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
            A+  +WDDV+  R  M+ + +KK+P                       +  I + +  L
Sbjct: 498 HASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLREL 557

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI------ 893
              +K+ GYVPD D VL D++ E+KE +L +HSEKLA A+ L+ TP   P  VI      
Sbjct: 558 TSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVC 617

Query: 894 ------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                       +SN+E +   ++RFHH ++G C C D
Sbjct: 618 SDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGD 655



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 156/353 (44%), Gaps = 65/353 (18%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL------ 104
           S  S +  +L+  IS + L LGK  H+ I+ S    D+F++N+L+ +YS+CG L      
Sbjct: 50  SEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITL 109

Query: 105 -------------------------VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAEN 139
                                    V AR++FD+MP+R++ +WN+++A     G    E 
Sbjct: 110 FGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVA-----GLIQFEF 164

Query: 140 VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
             EG  LF  + E         L  +L+ C     + A   VHGY  K G  ++  V  +
Sbjct: 165 NEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSS 224

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L ++Y K G + E + L   M  ++VV W  ++   A+NG+ EEV   +  +  +G  PD
Sbjct: 225 LAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPD 284

Query: 260 DESVQCVLGVISDLG------KRHEEQVQA-----------------------YAIKLLL 290
             +   V+   S+L       + H E ++A                       Y++K+ L
Sbjct: 285 KITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFL 344

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
              N +VV W+  ++ Y   G    AI+ F  M +  ++ + VTFL  L A +
Sbjct: 345 ECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACS 397



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 112/505 (22%), Positives = 196/505 (38%), Gaps = 128/505 (25%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA----------- 213
           LL+ C+S   +   + +H   +  G   D+F+S  L+N+YSK G++  A           
Sbjct: 58  LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117

Query: 214 --------------------KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
                               + +FD M ER+V  W  M+    +  F EE   LF  ++ 
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE 177

Query: 254 SGLCPDDESVQCVL----GVISDLGKRHEEQVQAYAIK---------------------- 287
            G  PD+ ++  VL    G+ + +  R   QV  Y  K                      
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGR---QVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 288 ------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                 L+    + NVV WN  ++G  Q G     ++ +  M  +  + D +TF+  +++
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
            +    L  GQQIH   +K+G    V V +SLI+MYS+ GC+      +++L   L    
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCL------EYSLKVFLE--- 345

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                                              C NG               D+  W+
Sbjct: 346 -----------------------------------CENG---------------DVVCWS 355

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG-CLLMLKQGKQMHAYAMK 520
           +MI  Y       +A++LF+ M       +++T  + + AC  C L  K  K       K
Sbjct: 356 SMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEK 415

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALS 579
            G +  L   + ++D+  + G++ +A+++   +P   DV  W T++S C  + + ++A  
Sbjct: 416 YGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARR 475

Query: 580 IYHQM-RLSGVVPDEFTFAILVKAS 603
           I  ++ RL    P  +     + AS
Sbjct: 476 ISEEVFRLDPRDPVPYVLLSNIHAS 500



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 23/304 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR       L+ G+  H  +       +  + ++L  MY +CGSL    RL   MP +
Sbjct: 189 SVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQ 248

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++++WN+++A  A +G    E V + + +   ++ +     ++T   ++  C     +  
Sbjct: 249 NVVAWNTLIAGRAQNG--YPEEVLDQYNM---MKMAGFRPDKITFVSVISSCSELATLGQ 303

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H   +K G      V  +L+++YS+ G +  +  +F   +  DVV W  M+ AY  
Sbjct: 304 GQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGF 363

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQAYAIKLLLY 291
           +G G E   LF  + +  L  +D +   +L   S  G      K  +  V+ Y +K  L 
Sbjct: 364 HGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLE 423

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNL 350
           +    V L  +           +G++E    +IRS  V+ D +T+   L+A        +
Sbjct: 424 HYTCMVDLLGR-----------YGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEM 472

Query: 351 GQQI 354
            ++I
Sbjct: 473 ARRI 476


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 290/984 (29%), Positives = 457/984 (46%), Gaps = 147/984 (14%)

Query: 73   KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
            +S H  ++      D FL N+L+  Y++   L  ARR+FD MP R+ +SW  +++ +  S
Sbjct: 85   ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 133  GEGNAENVTEGFRLFRS-LRESI-TFTSRLTLAPLLKLCLSSG--YVWASETVHGYALKI 188
            G        + F LFR+ LRE      +  T   +L+ C  SG   +  +  VHG   K 
Sbjct: 145  GLPE-----DAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKT 199

Query: 189  GLVWDEFVSGALVNIYSK--FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
                +  V  AL+++Y     G    A+ +FD    RD++ W  ++  YA+ G     F 
Sbjct: 200  EFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFT 259

Query: 247  LFVDLH--RSG--LCPDDESV----------QCVLGVISDLGKR------------HEEQ 280
            LF  +    SG  L P + +            C LG++  L  R                
Sbjct: 260  LFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSAL 319

Query: 281  VQAYAIKLLLYN--------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
            V A+A   +L             N V  N  ++G ++      A E F+   R +   + 
Sbjct: 320  VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGA-RDSAAVNV 378

Query: 333  VTFLVALAAVA----GTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMGCV---- 383
             T++V L+A+A        L  G+++H   L++G  Y  + V N L+NMY+K G +    
Sbjct: 379  DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438

Query: 384  ----------------------------------CGLRTDQF---TLASVLRASSSLPEG 406
                                              C +R +       A++   SS    G
Sbjct: 439  RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 498

Query: 407  L-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L    +Q+H  A+K     D+ VS AL+ +Y   G M+E   +F +    D+ +WN+ I 
Sbjct: 499  LLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IM 557

Query: 466  GYILSNNS--HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
            G + S+ +   +++++FS+M  SG   +++T    + A   L +L+ GKQ+H+  +K G 
Sbjct: 558  GVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGV 617

Query: 524  ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYH 582
              D  V + ++  Y K G +   + +F+ +    D ++W +MISG + NG    A+    
Sbjct: 618  TEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVC 677

Query: 583  QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
             M  S  + D  TF+I++ A + + ALE+G ++HA  ++    SD  V  +LVDMY+KCG
Sbjct: 678  LMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCG 737

Query: 643  NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
             I+ A  +F  M  +N   WN+M+ G A+HG G + L++FE+M+  G  PD VTF+ VLS
Sbjct: 738  RIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLS 797

Query: 703  ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
            ACS+ GLV    + F LM E YGI P +EHYS ++D LGRAG   +  E +  MP + + 
Sbjct: 798  ACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNT 856

Query: 763  SMHRALLGAC---RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
             + R +L AC   + +   + G   +  L+ LEP +   YVL S   AA  +W+D   AR
Sbjct: 857  LIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKAR 916

Query: 820  GEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTD 856
              MK   VKK+                           I+ K+  LI++I+  GYVP T+
Sbjct: 917  AAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTE 976

Query: 857  FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LS 895
            +VL D+EEE KE  L YHSEKLA A+ L  +     I                     + 
Sbjct: 977  YVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIV 1036

Query: 896  NKEPLYAN--RFHHLRDGMCPCAD 917
             ++ +  +  RFHH +DG C C D
Sbjct: 1037 GRQIILRDSIRFHHFKDGKCSCGD 1060



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 183/739 (24%), Positives = 322/739 (43%), Gaps = 114/739 (15%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKST--HARILNSSQIPDR 88
           LP  +  L   + +       +S  + S+LR    +    LG +   H  +  +    + 
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205

Query: 89  FLTNNLMTMYSRC--GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
            + N L++MY  C  G  + A+R+FD  P RDLI+WN++++ YA  G+         F L
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICT-----FTL 260

Query: 147 FRSLRESITFTSRLTLAP--------LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           FR+++      S + L P        +    LSS  +   + +    LK G   D +V  
Sbjct: 261 FRAMQYD---DSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGS 317

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           ALV+ +++ G + EAK ++ G++ER+ V    ++    +   GE    +F+    S    
Sbjct: 318 ALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVN 377

Query: 259 DDESVQCVLGVISDL-----GKRHEEQVQAYAI-------KLLLYNNNSNV--------- 297
            D  V  +L  I++      G R   +V A+ +       K+ + N   N+         
Sbjct: 378 VDTYV-VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436

Query: 298 -------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                        + WN  ++   Q G    A+  +  M ++++   +   +  L++ AG
Sbjct: 437 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
              L  GQQ+H   +K G Y    V N+L+ MY + G +                     
Sbjct: 497 LGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSI 556

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   GL  ++ T  + L A + L   L L KQIH   +K+
Sbjct: 557 MGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSV-LELGKQIHSVMLKH 615

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALEL 479
               D+ V  AL+  Y ++G +   E LF    G  D  +WN+MI GYI + +  +A++ 
Sbjct: 616 GVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDC 675

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
              M  S + +D  T +  + AC  +  L++G +MHA+ ++S  E D+ V S ++DMY K
Sbjct: 676 VCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSK 735

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +  A  +F+ +   ++ +W +MISG   +G    AL I+ +M+ SG  PD  TF  +
Sbjct: 736 CGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSV 795

Query: 600 VKASSCLTALEQG------RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           + A S    +E+G       + +  L +++  S       ++D+  + G ++      K+
Sbjct: 796 LSACSHAGLVERGLDYFELMEDYGILPRIEHYS------CVIDLLGRAGELDKIQEYMKR 849

Query: 654 MDMR-NTVLWNAMLVGLAQ 671
           M M+ NT++W  +LV   Q
Sbjct: 850 MPMKPNTLIWRTVLVACQQ 868


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 275/879 (31%), Positives = 415/879 (47%), Gaps = 140/879 (15%)

Query: 143 GFRLFRSLRESITFTSRLTLAP-------LLKLC---LSSGYVWASETVHGYALKIGLVW 192
           G  L R L  S+ F S  T +P       LL+ C   +++        VHG+        
Sbjct: 7   GSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFT------- 59

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGM--QERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            E  S A V  Y + G   EA  L   +      V  W  ++R   + G  ++    +  
Sbjct: 60  -EMFSYA-VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQ 117

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
           + R G  PD  +   VL    ++   RH   V A      L    SNV + N  ++ Y +
Sbjct: 118 MQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGL---GSNVFICNSIVAMYGR 174

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A + F  ++   ++ D V++   LAA            + G   ++    A  +
Sbjct: 175 CGALDDAHQMFDEVLERKIE-DIVSWNSILAAY-----------VQGGQSRTALRIAFRM 222

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
           GN     YS       LR D  TL ++L A +S+   L   KQ+H  +++N  V D FV 
Sbjct: 223 GNH----YS-----LKLRPDAITLVNILPACASVF-ALQHGKQVHGFSVRNGLVDDVFVG 272

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY---------------------- 467
            AL+ +Y +   M EA  +FE     D+ +WNAM+ GY                      
Sbjct: 273 NALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIK 332

Query: 468 --------ILSNNSHK-----ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                   +++  + K     AL++F  M   G   + +T+A+ +  C  +  L  GKQ 
Sbjct: 333 LDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQT 392

Query: 515 HAYAMKSGFEL-------DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMI 565
           HAY +K+   L       DL V +G++DMY KC +   A+SIF+ I   D   V WT MI
Sbjct: 393 HAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMI 452

Query: 566 SGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
            G   +GE + AL ++ Q+  + + + P+ FT +  + A + L  L  GRQ+HA  ++ +
Sbjct: 453 GGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNE 512

Query: 624 CSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             S+  +VG  L+DMY+K G+I+ A  +F  M +RN V W +++ G   HG GEE L LF
Sbjct: 513 NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLF 572

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           + M+  G   D +TF+ VL ACS++G+V +    FH M + +GI P  EHY+ +VD LGR
Sbjct: 573 DQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGR 632

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AGR  EA ELI +M  E +A +  ALL A R+  + E G++ A KL  L   +  +Y LL
Sbjct: 633 AGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLL 692

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKV 839
           SN++A A +W DV   R  MK   ++K P                       ++ I+  +
Sbjct: 693 SNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLL 752

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS--------- 890
             LIKRIK+ GYVP T F L DV++EEK   L+ HSEKLA AYG+++T P          
Sbjct: 753 LDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNL 812

Query: 891 -------------SVILSNKEPLY-ANRFHHLRDGMCPC 915
                        S+I+ ++  L  ++RFHH + G C C
Sbjct: 813 RICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSC 851



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 196/433 (45%), Gaps = 92/433 (21%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G S HA +  +    + F+ N+++ MY RCG+L  A ++FD++ +R   D++SWNSILAA
Sbjct: 146 GASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAA 205

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y   G+     +   FR+       +     +TL  +L  C S   +   + VHG++++ 
Sbjct: 206 YVQGGQSRTA-LRIAFRMGNHYSLKLR-PDAITLVNILPACASVFALQHGKQVHGFSVRN 263

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM----------------- 231
           GLV D FV  ALV++Y+K  K+ EA  +F+G++++DVV W  M                 
Sbjct: 264 GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLF 323

Query: 232 ------------------LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
                             +  YA+ G G E   +F  +   GL P+  ++  +L   + +
Sbjct: 324 KMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASV 383

Query: 274 GK-RHEEQVQAYAIK-------------LLLYN------------------------NNS 295
           G   + +Q  AY IK             LL+ N                         + 
Sbjct: 384 GALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDK 443

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           NVV W   + GY Q G+ + A++ F  +   +++++ ++ T   AL A A    L LG+Q
Sbjct: 444 NVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQ 503

Query: 354 IHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSLP------ 404
           +H   L++   S V+ VGN LI+MYSK G +   R   D   L +V+  +S +       
Sbjct: 504 LHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHG 563

Query: 405 ---EGLHLSKQIH 414
              E LHL  Q+ 
Sbjct: 564 RGEEALHLFDQMQ 576



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 159/365 (43%), Gaps = 71/365 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +IL    S   L  GK  H   + +  + D F+ N L++MY++C  +  A ++F+ +  +
Sbjct: 239 NILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK 298

Query: 118 DLISWNSILAAYAHSGEGNA----------ENVT--------------------EGFRLF 147
           D++SWN+++  Y+  G  ++          E++                     E   +F
Sbjct: 299 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 358

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--IGLVW-----DEFVSGAL 200
           R ++      + +TLA LL  C S G +   +  H Y +K  + L W     D  V   L
Sbjct: 359 RQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGL 418

Query: 201 VNIYSKFGKIREAKFLFDGMQERD--VVLWKVMLRAYAENGFGEEVFHLFVDL--HRSGL 256
           +++Y+K    R A+ +FD ++ +D  VV W VM+  YA++G   +   LF  +   ++ L
Sbjct: 419 IDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSL 478

Query: 257 CPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-----LLLYNNN---------------- 294
            P+  ++ C L   + LG+ R   Q+ AYA++      +LY  N                
Sbjct: 479 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAAR 538

Query: 295 --------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                    NVV W   ++GY   G    A+  F  M +     D +TFLV L A + + 
Sbjct: 539 AVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSG 598

Query: 347 NLNLG 351
            ++ G
Sbjct: 599 MVDQG 603


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 261/787 (33%), Positives = 376/787 (47%), Gaps = 81/787 (10%)

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H   LK G   D F+   L+N+Y + G    A+ LFD M +R+ V W  ++  Y +NG  
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISD--LGKRHEEQVQAYAIKLLLYNNNSNVVL 299
           E+   +  ++   G  P+  +    +    +  L +R   QV  YAI+  L  N++ V +
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGL--NDAKVAV 140

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
            N  ++ Y + GD   A   F  M    V  DSV++                  I G   
Sbjct: 141 GNGLINMYAKCGDIDHARSVFGLM----VDKDSVSW---------------NSMITGLDQ 181

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
              F  AV   NS+           GL    F L S L + +SL   L L +Q H   IK
Sbjct: 182 NKCFEDAVKSYNSMRKT--------GLMPSNFALISALSSCASLGCIL-LGQQTHGEGIK 232

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS-HKALE 478
                D  VS  L+ +Y     +AE + +F      D  +WN +I     S  S  +A+E
Sbjct: 233 LGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIE 292

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           +F  M  +G   + +T    +     L   K   Q+HA  +K   + D  + + +L  Y 
Sbjct: 293 VFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYG 352

Query: 539 KCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           K G M + + IF+ +    D+V+W +MISG + N     A+ +   M   G   D FTFA
Sbjct: 353 KSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFA 412

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ A + +  LE G ++HA  I+    SD  +G +LVDMY+KCG I+ A   F  M +R
Sbjct: 413 TVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N   WN+M+ G A+HG+G+  L+LF  MK  G  PD +TF+GVLSACS+ GLV E +E F
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYF 532

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA-CRVQG 776
             M E YG+ P VEHYS +VD LGRAG   +    I  MP + +  + R +LGA CR  G
Sbjct: 533 KSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNG 592

Query: 777 -DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
             TE G+  AE L  ++P ++  YVLLSN++A+  +W+D+   R  M+   VKK+     
Sbjct: 593 RKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSW 652

Query: 833 --------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                                LI+AK++ L K+I++ GYVP   F L D+E E KE  L 
Sbjct: 653 VTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLS 712

Query: 873 YHSEKLARAYGLI--STPP--------------------SSVILSNKEPLYANRFHHLRD 910
           YHSEKLA A+ L   S  P                    S V+  +     +NRFHH  D
Sbjct: 713 YHSEKLAVAFVLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFED 772

Query: 911 GMCPCAD 917
           G C C D
Sbjct: 773 GKCSCRD 779



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 150/582 (25%), Positives = 240/582 (41%), Gaps = 106/582 (18%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H  +L      D FL N L+ +Y R G  V AR+LFD+MPDR+ ++W  +++ Y  +G  
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 136 N------AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW--ASETVHGYALK 187
                   E + EGF             +R      ++ C  S  +W      VHGYA++
Sbjct: 83  EDACGVLKEMIFEGF-----------LPNRFAFGSAIRACQES-MLWRRKGRQVHGYAIR 130

Query: 188 IGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            GL   +   G  L+N+Y+K G I  A+ +F  M ++D V W  M+    +N   E+   
Sbjct: 131 TGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVK 190

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG------KRHEE--------QVQAYAIKLLLYN 292
            +  + ++GL P + ++   L   + LG      + H E         V      L LY 
Sbjct: 191 SYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYA 250

Query: 293 NNSNV---------------VLWNKKLSGYLQVGDN-HGAIECFVNMIRSNVQYDSVTFL 336
             S +               V WN  +      G +   AIE F+ M+R+    + VTF+
Sbjct: 251 ETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 310

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----C---------- 382
             LA V+      L  QIH   LK        + N+L+  Y K G    C          
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 370

Query: 383 ------------------VC------------GLRTDQFTLASVLRASSSLPEGLHLSKQ 412
                             +C            G R D FT A+VL A +++   L    +
Sbjct: 371 RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVAT-LECGME 429

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H  AI+    +D  + +AL+D+Y + G +  A   F      +L +WN+MI GY    +
Sbjct: 430 VHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGH 489

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM-HAYAMKSGFELDL 527
              AL LF+ M  SG+  D IT    + AC  + ++ +G    K M   Y +    E   
Sbjct: 490 GDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYS 549

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           C    ++D+  + G +   ++  N +P  P+ + W T++  C
Sbjct: 550 C----MVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC 587



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 6/243 (2%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           S S ++  FL+      S +   + ++L    S S   L    HA IL  +   D  + N
Sbjct: 286 SVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIEN 345

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
            L+  Y + G +     +F +M +R D +SWNS+++ Y H+     E + +   L   + 
Sbjct: 346 ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHN-----ELLCKAMDLVWLMM 400

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           +        T A +L  C +   +     VH  A++  L  D  +  ALV++YSK G+I 
Sbjct: 401 QRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRID 460

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A   F+ M  R++  W  M+  YA +G G+    LF  +  SG  PD  +   VL   S
Sbjct: 461 YASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACS 520

Query: 272 DLG 274
            +G
Sbjct: 521 HIG 523



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 128/317 (40%), Gaps = 34/317 (10%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S L    S   +LLG+ TH   +      D  ++N L+ +Y+    L   +++F  M +
Sbjct: 208 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLE 267

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RD +SWN+++ A A SG     +V+E   +F  +  +    +R+T   LL    S     
Sbjct: 268 RDQVSWNTVIGALADSG----ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 323

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAY 235
            S  +H   LK  +  D  +  AL+  Y K G++   + +F  M E RD V W  M+  Y
Sbjct: 324 LSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGY 383

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN- 293
             N    +   L   + + G   D  +   VL   + +       +V A AI+  L ++ 
Sbjct: 384 IHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDV 443

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                        N+  WN  +SGY + G    A+  F  M  S
Sbjct: 444 VIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLS 503

Query: 327 NVQYDSVTFLVALAAVA 343
               D +TF+  L+A +
Sbjct: 504 GQLPDHITFVGVLSACS 520


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 222/708 (31%), Positives = 350/708 (49%), Gaps = 91/708 (12%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           L++  L GY +      A+     M   +V+     F   L       +L  G++IHG  
Sbjct: 114 LYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 173

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVC---------------------------------- 384
           + + F + V     ++NMY+K   +                                   
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 233

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G R D  TL +VL A++ +   L + K IH +AI+        +STAL D+
Sbjct: 234 ELVLRMQDEGQRPDSITLVTVLPAAADVGL-LMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + GS+  A  +F+  D   + +WN+M+ GY+ +    KA+ +F  M   G     +TI
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
             A+ AC  L  L++GK +H +  +     D+ V + ++ MY KC  +  A  IFN++  
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              V+W  MI G   NG    AL+ + +M+  G+ PD FT   ++ A + L+     + I
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +I+     + FV  +LVDMY+KCG I  A  LF  +  R+ + WNAM+ G   HG G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
              L LF+ MK   VEP+ +T++ V+SACS++GLV E   +F  M++ YG+EP ++HY  
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD LGRAGR KEA + I +MP     +++ A  GAC++  + E G+  A+KL  L P +
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDE 652

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------A 832
              +VLL+NI+A+ ++W  V   R  M++K +KK P                       +
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
             I+A +E L+  IK  GYVPDT+ + LDVE++ +E+ L  HSEKLA A+GL++T P + 
Sbjct: 713 KRIYAFLEELVYEIKAAGYVPDTNLI-LDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTT 771

Query: 893 I---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           I                     ++ +E +  +  RFHH ++G+C C D
Sbjct: 772 IHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGD 819



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/566 (22%), Positives = 238/566 (42%), Gaps = 99/566 (17%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +DL  GK  H +++ +S   + F    ++ MY++C  +  A ++FD+MP+RDL+SWN+I+
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTII 220

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A ++ +G        +   L   +++       +TL  +L      G +   +++HGYA+
Sbjct: 221 AGFSQNGFAK-----KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + G      +S AL ++YSK G +  A+ +FDGM ++ VV W  M+  Y +NG  E+   
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLL--------------- 290
           +F  +   G+ P   ++   L   +DLG     + V  +  +L L               
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395

Query: 291 -----------YN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                      +N  N    V WN  + GY Q G    A+ CF  M    ++ DS T + 
Sbjct: 396 KCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVS 455

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
            + A+A        + IHG  ++S     + V  +L++MYSK G +              
Sbjct: 456 VIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI-------------- 501

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                     H+++++       D ++D  V                             
Sbjct: 502 ----------HMARKLF------DMISDRHV----------------------------- 516

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            TWNAMI GY        AL+LF  M       ++IT  + + AC    ++ +G + H  
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFK 575

Query: 518 AMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
           +MK  + L+  +     ++D+  + G + +A     ++P +P    +      C     +
Sbjct: 576 SMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGAC--KIHK 633

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILV 600
           ++ +      +L  + PDE  + +L+
Sbjct: 634 NIEVGEKAAKKLFELNPDEGGYHVLL 659



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 4/315 (1%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           A +L   +S+ E LH   QI    IKN    +    T L+ ++ + GS+ EA  +FE  D
Sbjct: 53  AVLLELCTSMKE-LH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPID 108

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
               A ++ M+ GY  +++   AL     M     +         +K CG    LK+GK+
Sbjct: 109 DKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   + + F  ++   +G+++MY KC  + DA  +F+ +P  D V+W T+I+G   NG 
Sbjct: 169 IHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGF 228

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              AL +  +M+  G  PD  T   ++ A++ +  L  G+ IH   I+   +    +  +
Sbjct: 229 AKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTA 288

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L DMY+KCG++E A ++F  MD +  V WN+M+ G  Q+G  E+ + +FE M   G++P 
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT 348

Query: 694 SVTFIGVLSACSYTG 708
            VT +  L AC+  G
Sbjct: 349 GVTIMEALHACADLG 363



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 35/335 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L  A     L++GKS H   + +       ++  L  MYS+CGS+  AR +FD M  +
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SWNS++  Y  +GE       +   +F  + E     + +T+   L  C   G +  
Sbjct: 313 TVVSWNSMMDGYVQNGEPE-----KAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLER 367

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH +  ++ L  D  V  +L+++YSK  ++  A  +F+ +  R  V W  M+  YA+
Sbjct: 368 GKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQ 427

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN--- 293
           NG   E  + F ++   G+ PD  ++  V+  +++L   RH + +    I+  L  N   
Sbjct: 428 NGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV 487

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                    + +V+ WN  + GY   G    A++ F  M +  V
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + + +T+L  ++A + +  ++ G + H  ++K  +
Sbjct: 548 EPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDY 581



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 23/169 (13%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+ RHA         K  H  I+ S    + F+T  L+ MYS+CG++  AR+LFD + D
Sbjct: 463 LSVTRHA---------KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV- 175
           R +I+WN+++  Y   G G A        LF  +++     + +T   ++  C  SG V 
Sbjct: 514 RHVITWNAMIDGYGTHGLGRA-----ALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568

Query: 176 ----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
                       Y L+  +  D +  GA+V++  + G+I+EA    + M
Sbjct: 569 EGLRHFKSMKQDYGLEPSM--DHY--GAMVDLLGRAGRIKEAWDFIENM 613


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 240/773 (31%), Positives = 367/773 (47%), Gaps = 152/773 (19%)

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           S  V WN  +  +++ G    AI     M+R+  + D  T   AL A     +   G   
Sbjct: 112 SPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAF 171

Query: 355 HGTTLKSGFYSAVIVGNSLI---------------------------------------- 374
           HG    +GF S V V N+L+                                        
Sbjct: 172 HGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKG 231

Query: 375 -------NMYSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
                  +++S+M  +        R+D  ++ ++L A +SL + L  +K+IH +AI+N T
Sbjct: 232 SNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASL-KALPQTKEIHSYAIRNGT 290

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
            AD+FV  ALID Y + GSM +A  +F   +  D+ +WNAM+ GY  S     A ELF +
Sbjct: 291 FADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKN 350

Query: 483 MHTSGERLD-----------------------------------EITIATAVKACGCLLM 507
           M      LD                                    +TI + + AC  L  
Sbjct: 351 MRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGA 410

Query: 508 LKQGKQMHAYAMKSGF------------ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           L QG + HAY++K                 DL V + ++DMY KC +   A++IFN IP 
Sbjct: 411 LSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPR 470

Query: 556 PDD--VAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKASSCLTALEQ 611
            +   V WT MI G    G+ + AL ++ +M  +   V P+ +T + ++ A + L++L  
Sbjct: 471 RERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRM 530

Query: 612 GRQIHANLIKLDC--SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           G+QIHA + +     SS  FV   L+DMY+KCG+++ A  +F  M  RN V W +M+ G 
Sbjct: 531 GKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGY 590

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG G+E L +F+ M+  G  PD ++F+ +L ACS++G+V +  + F +MR  YG+   
Sbjct: 591 GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIAS 650

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            +HY+ ++D L R+GR  +A + I  MP E SA++  ALL ACRV  + E  ++   KL+
Sbjct: 651 AQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLV 710

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
           +++  +  +Y L+SNI+A A +W DV   R  MK+  +KK P                  
Sbjct: 711 SMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGD 770

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                +  I++ +E LI RIK  GYVP+T+F L DV++EEK   L  HSEKLA AYGL++
Sbjct: 771 RSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLT 830

Query: 887 TPPSSVILSNKEP----------LY-------------ANRFHHLRDGMCPCA 916
           T P   I   K            +Y             ++RFHH ++G C C 
Sbjct: 831 TSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCG 883



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 168/664 (25%), Positives = 297/664 (44%), Gaps = 86/664 (12%)

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAEN-VT 141
           S +  + L   ++  Y  CG+   A  + +++     + WN  L   AH  EG  +  + 
Sbjct: 78  SYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWN--LLVRAHIEEGRLDRAIG 135

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
              R+ R+     T     TL   LK C       +    HG     G   + FV  ALV
Sbjct: 136 VSCRMLRAG----TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALV 191

Query: 202 NIYSKFGKIREAKFLFDGMQER---DVVLWKVMLRAYAENGFGEEVFHLFVDL----HRS 254
            +YS+ G + +A  +FD +  +   DV+ W  ++ A+ +         LF ++    H  
Sbjct: 192 AMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEK 251

Query: 255 GLC--PDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------------------ 287
                 D  S+  +L   + L      +++ +YAI+                        
Sbjct: 252 ATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMK 311

Query: 288 --LLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             + ++N     +VV WN  ++GY Q G    A E F NM + N+  D +T+    A +A
Sbjct: 312 DAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITW---SAVIA 368

Query: 344 GTDNLNLGQQIHGTTLKSGFY-----SAVIVGNSLINMYSKMGCVC-GLRTDQFTLASVL 397
           G      GQ+   T  +   Y     S  I+  SL++  + +G +  G+ T  ++L   L
Sbjct: 369 GYAQRGYGQEALDTFQQMILYGSEPNSVTII--SLLSACASLGALSQGMETHAYSLKKCL 426

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGF 455
            +  +   G    + + VH              ALID+Y +  S   A  +F +  +   
Sbjct: 427 LSLDNDFGGDGDGEDLVVH-------------NALIDMYSKCRSFKAARTIFNSIPRRER 473

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQ 513
           ++ TW  MI GY    +S+ AL+LFS M +    +  +  TI+  + AC  L  L+ GKQ
Sbjct: 474 NVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQ 533

Query: 514 MHAYAMK-SGFELDL-CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +HAY  +   +E  +  V++ ++DMY KCG +  A+++F+ +P  ++V+WT+M+SG   +
Sbjct: 534 IHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMH 593

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD----CSSD 627
           G    AL I+ +M+ +G VPD+ +F +L+ A S    ++QG   + ++++ D     S+ 
Sbjct: 594 GRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD-YFDIMRSDYGVIASAQ 652

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFE 683
            +  +  +D+ A+ G ++ A+   ++M M  +  +W A+L     H N    E  L    
Sbjct: 653 HYACV--IDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLV 710

Query: 684 DMKA 687
            MKA
Sbjct: 711 SMKA 714



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/576 (23%), Positives = 241/576 (41%), Gaps = 111/576 (19%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G + H  I  +    + F+ N L+ MYSR GSL  A  +FD++  +   D+ISWNSI+AA
Sbjct: 168 GSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAA 227

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSR---LTLAPLLKLCLSSGYVWASETVHGYA 185
             H    N     + F    ++        R   +++  +L  C S   +  ++ +H YA
Sbjct: 228 --HVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYA 285

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           ++ G   D FV  AL++ Y+K G +++A  +F+ M+ +DVV W  M+  Y ++G     F
Sbjct: 286 IRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAF 345

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LF ++ +  +  D                                     V+ W+  ++
Sbjct: 346 ELFKNMRKENIPLD-------------------------------------VITWSAVIA 368

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY Q G    A++ F  MI    + +SVT +  L+A A    L+ G + H  +LK    S
Sbjct: 369 GYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLS 428

Query: 366 ------------AVIVGNSLINMYSKMGCVCGLRT------------------------- 388
                        ++V N+LI+MYSK       RT                         
Sbjct: 429 LDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQY 488

Query: 389 ----------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                                 + +T++ +L A + L   L + KQIH +  ++     S
Sbjct: 489 GDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHL-SSLRMGKQIHAYVTRHHEYESS 547

Query: 427 --FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
             FV+  LID+Y + G +  A  +F++    +  +W +M+ GY +     +AL++F  M 
Sbjct: 548 VYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQ 607

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGA 542
            +G   D+I+    + AC    M+ QG   +   M+S + +       + ++D+  + G 
Sbjct: 608 KAGFVPDDISFLVLLYACSHSGMVDQGLD-YFDIMRSDYGVIASAQHYACVIDLLARSGR 666

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +  A     ++P  P    W  ++S C  +   +LA
Sbjct: 667 LDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELA 702



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 44/338 (13%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V+   + T ++  Y   G+ ++A  + E         WN ++  +I      +A+ +   
Sbjct: 80  VSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCR 139

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M  +G + D  T+  A+KACG L   + G   H     +GFE ++ V + ++ MY + G+
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGS 199

Query: 543 MVDAQSIFNDIPAP---DDVAWTTMISGCVDNGEEDLALSIYHQM------RLSGVVPDE 593
           + DA  +F++I      D ++W ++++  V       AL ++ +M      + +    D 
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            +   ++ A + L AL Q ++IH+  I+    +D FV  +L+D YAKCG+++DA  +F  
Sbjct: 260 ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319

Query: 654 MDMRNTVLWNAM-----------------------------------LVGLAQHGNGEET 678
           M+ ++ V WNAM                                   + G AQ G G+E 
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           L  F+ M  +G EP+SVT I +LSAC+  G +S+  E 
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMET 417



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 164/400 (41%), Gaps = 94/400 (23%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +IL    S   L   K  H+  + +    D F+ N L+  Y++CGS+  A  +F+ M  +
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES------ITFTS------------- 158
           D++SWN+++  Y  SG+  A      F LF+++R+       IT+++             
Sbjct: 324 DVVSWNAMVTGYTQSGKFGA-----AFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQE 378

Query: 159 ----------------RLTLAPLLKLCLSSGYVWASETVHGYALKIGLV----------- 191
                            +T+  LL  C S G +      H Y+LK  L+           
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438

Query: 192 -WDEFVSGALVNIYSKFGKIREAKFLFDGM--QERDVVLWKVMLRAYAENGFGEEVFHLF 248
             D  V  AL+++YSK    + A+ +F+ +  +ER+VV W VM+  YA+ G   +   LF
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498

Query: 249 VDL--HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNN----------- 294
            ++      + P+  ++ C+L   + L   R  +Q+ AY  +   Y ++           
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558

Query: 295 -------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                               N V W   +SGY   G    A++ F  M ++    D ++F
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 336 LVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           LV L A +       G D  ++ +  +G    +  Y+ VI
Sbjct: 619 LVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVI 658



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 23/252 (9%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP------------DR 88
           F Q   + S  +S    S+L    S   L  G  THA  L    +             D 
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
            + N L+ MYS+C S   AR +F+ +P  +R++++W  ++  YA  G+ N     +  +L
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN-----DALKL 497

Query: 147 FRSL--RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE--FVSGALVN 202
           F  +  +      +  T++ +L  C     +   + +H Y  +         FV+  L++
Sbjct: 498 FSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLID 557

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +YSK G +  A+ +FD M +R+ V W  M+  Y  +G G+E   +F  + ++G  PDD S
Sbjct: 558 MYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDIS 617

Query: 263 VQCVLGVISDLG 274
              +L   S  G
Sbjct: 618 FLVLLYACSHSG 629


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 251/848 (29%), Positives = 390/848 (45%), Gaps = 176/848 (20%)

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D D++ WN  ++AY   G+           +F  +R   T T    ++  L    ++ + 
Sbjct: 57  DSDIVKWNRKISAYMRKGQ-----CESALSVFNGMRRRSTVTYNAMISGYLS---NNKFD 108

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            A +       +  + W+  +SG     Y K G +  A+ LF+ M E+DVV W  ML  +
Sbjct: 109 CARKVFEKMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
           A+NGF EE   +F                                      ++L+ N   
Sbjct: 164 AQNGFVEEARKIFD-------------------------------------QMLVKNE-- 184

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
             + WN  LS Y+Q    +G IE    +  S + ++ V++   +        L+  + + 
Sbjct: 185 --ISWNGLLSAYVQ----NGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF 238

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                       I  N +I  Y++ G           L+   R    LP           
Sbjct: 239 DRMP----VRDKISWNIMITGYAQNGL----------LSEARRLFEELP----------- 273

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                  + D F  TA++  + +NG + EA  +FE     +  +WNAMI GY+ S    K
Sbjct: 274 -------IRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A ELF  M +                                        +    + ++ 
Sbjct: 327 ARELFDQMPSR---------------------------------------NTSSWNTMVT 347

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            Y +CG +  A+ +F+++P  D ++W  MISG   +G+ + AL ++ +M+  G + +   
Sbjct: 348 GYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A  + + + + ALE G+Q+H  L+K    +    G +L+ MY KCG+IE+A+ +F+ + 
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT 467

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V WN M+ G A+HG G+E L LFE MK   ++PD VT +GVLSACS+TGLV +  E
Sbjct: 468 EKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGME 526

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F+ M + YGI    +HY+ ++D LGRAGR  EA  L+ SMPF   A+   ALLGA R+ 
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---- 831
           GDTE G+  AEK+  +EP +S  YVLLSN++AA+ +W +V   R +M+ K VKK P    
Sbjct: 587 GDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSW 646

Query: 832 -------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                              A+ I+A +E L   +K+ G+V  T  VL DVEEEEKE  L 
Sbjct: 647 VEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLK 706

Query: 873 YHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLR 909
           YHSEKLA A+G++S PP   I                     ++ ++ +   +NRFHH  
Sbjct: 707 YHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFS 766

Query: 910 DGMCPCAD 917
           +G C C D
Sbjct: 767 EGSCSCGD 774



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 227/507 (44%), Gaps = 43/507 (8%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++PDR L   N +++ Y + G+L  AR LF++MP++D++SWN++L+ +A +G      V 
Sbjct: 116 KMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG-----FVE 170

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV-WDEFVSGAL 200
           E  ++F    + +   + ++   LL   + +G +  +  +    +   +V W+  + G  
Sbjct: 171 EARKIF----DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG-- 224

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
              Y +  ++ +A+ LFD M  RD + W +M+  YA+NG   E   LF +L         
Sbjct: 225 ---YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL--------- 272

Query: 261 ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
             ++ V    + +    +  +   A ++       N V WN  ++GY+Q      A E F
Sbjct: 273 -PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGT--------DNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             M   N    S   +V   A  G         D +     I    + SG Y+       
Sbjct: 332 DQMPSRNTS--SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISG-YAQSGQSEE 388

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
            ++++ KM    G+  ++  LA  L + + +   L L KQ+H   +K           AL
Sbjct: 389 ALHLFIKMKRDGGI-LNRSALACALSSCAEIA-ALELGKQLHGRLVKAGFQTGYIAGNAL 446

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           + +Y + GS+ EA  +FE+    D+ +WN MI GY       +AL LF  M  +  + D+
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDD 505

Query: 493 ITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T+   + AC    ++ +G +  ++     G   +    + ++D+  + G + +A ++  
Sbjct: 506 VTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMK 565

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLA 577
            +P  PD   W  ++     +G+ +L 
Sbjct: 566 SMPFYPDAATWGALLGASRIHGDTELG 592



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 185/444 (41%), Gaps = 107/444 (24%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL--RHAISTSDLLLGKSTHARIL 80
           F K   R+L S+++ L  +++  + S++ +    F+ +  +  +S + +L G + +  + 
Sbjct: 114 FEKMPDRDLISWNVMLSGYVKNGNLSAARAL---FNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 81  NSSQIPDRFLTNN------LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            + +I D+ L  N      L++ Y + G +  ARRLFD   D +++SWN ++  Y     
Sbjct: 171 EARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230

Query: 135 ------------------------GNAEN--VTEGFRLFRSL--RESITFTSRLT----- 161
                                   G A+N  ++E  RLF  L  R+   +T+ ++     
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290

Query: 162 --LAPLLKL-------------CLSSGYVWASETVHGYAL------KIGLVWDEFVSGAL 200
             L    ++              + +GYV + +      L      +    W+  V+G  
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-- 348

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
              Y++ G I +AK LFD M +RD + W  M+  YA++G  EE  HLF+ + R G   + 
Sbjct: 349 ---YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNR 405

Query: 261 ESVQCVLGVIS-----DLGKR-HEEQVQA-----------------------YAIKLLLY 291
            ++ C L   +     +LGK+ H   V+A                        A  +   
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED 465

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------G 344
               ++V WN  ++GY + G    A+  F +M +  ++ D VT +  L+A +       G
Sbjct: 466 ITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKG 524

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVI 368
            +  N   Q +G T  +  Y+ +I
Sbjct: 525 MEYFNSMYQNYGITANAKHYTCMI 548



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 16/204 (7%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H R++ +         N L+ MY +CGS+  A  +F+ + ++D++SWN+++A 
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALK 187
           YA  G G      E   LF S++ +I     +TL  +L  C  +G V    E  +     
Sbjct: 481 YARHGFGK-----EALALFESMKMTIK-PDDVTLVGVLSACSHTGLVDKGMEYFNSMYQN 534

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEE 243
            G+  +      ++++  + G++ EA  L   M    D   W  +L   R + +   GE+
Sbjct: 535 YGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEK 594

Query: 244 VFHLFVDLHRSGLCPDDESVQCVL 267
                 ++      PD+  +  +L
Sbjct: 595 AAEKVFEME-----PDNSGMYVLL 613


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 236/748 (31%), Positives = 361/748 (48%), Gaps = 100/748 (13%)

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y + G +++AK LF  +Q      W  M+R +   G        ++ +  +G+ PD  +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 263 ----VQCVLGVIS-DLGKRHEEQVQAYAIK---------LLLYNNNSNV----------- 297
               V+   G+ S  +GK   E V    +K         + LY  N ++           
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 298 ----VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
               VLWN  L+GY++ GD+  AI+ F+ M  S ++ +SVTF   L+  A    L+LG Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +HG  +  G      V N+L+ MYSK  C+                              
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G++ D  T AS L   + L    H  K+IH + I++  V D F+ +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH-CKEIHGYIIRHAVVLDVFLKS 299

Query: 431 ALIDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           ALID+Y  CR+  MA+          FD      MI GY+L+  + +ALE F  +     
Sbjct: 300 ALIDIYFKCRDVEMAQKNLC--QSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           +   +T ++   A   L  L  GK++H   +K+  +    V S ILDMY KCG +  A  
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +FN I   D + W +MI+ C  NG    A++++ QM + G   D  + +  + A + L A
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L  G++IH  +IK    SD +   SL+DMYAKCGN+  +  +F +M  +N V WN+++  
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISA 537

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG+ +E L LF +M  +G++PD VTF+G++SAC + G V E    +HLM E+YGI  
Sbjct: 538 YGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPA 597

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            +EHY+ + D  GRAGR  EA E I SMPF   A +   LLGAC + G+ E  +  ++ L
Sbjct: 598 RMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHL 657

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------A 832
             L+P +S  YVLL+N+ A A +W  V   R  MK + V+K P                A
Sbjct: 658 FDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAA 717

Query: 833 D-------LIFAKVEGLIKRIKEGGYVP 853
           D        I++ ++ L+  +K+ GYVP
Sbjct: 718 DGSHPLTAQIYSVLDSLLLELKKEGYVP 745



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 162/654 (24%), Positives = 282/654 (43%), Gaps = 80/654 (12%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY R GSL  A+ LF  +      +WN ++  +   G+ N          +  +  +   
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNY-----ALLFYLKMLGAGVS 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
             + T   ++K C     V   + VH     +GL  D FV  +L+ +Y++ G + +A++L
Sbjct: 56  PDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYL 115

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----- 271
           FD + ++D VLW VML  Y +NG       +F+++  S + P+  +  CVL V +     
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175

Query: 272 DLGKR------------------------HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           DLG +                         + Q    A KL      S++V WN  +SGY
Sbjct: 176 DLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGY 235

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           +Q G    A   F  MI + ++ DS+TF   L  V    +L   ++IHG  ++      V
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV 295

Query: 368 IVGNSLINMYSKM-----------------GCVCG------------------------- 385
            + ++LI++Y K                    VC                          
Sbjct: 296 FLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355

Query: 386 -LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            ++    T +S+  A + L   L+L K++H   IK        V +A++D+Y + G +  
Sbjct: 356 RMKPTSVTFSSIFPAFAGL-AALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDL 414

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      D   WN+MI     +    +A+ LF  M   G R D ++I+ A+ AC  
Sbjct: 415 ACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACAN 474

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  GK++H   +K     DL   S ++DMY KCG +  ++ +F+ +   ++V+W ++
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSI 534

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQIHANLIKLD 623
           IS   ++G+    L+++H+M  +G+ PD  TF  ++ A      +++G R  H    +  
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYG 594

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGE 676
             +       + DM+ + G + +A+     M    +  +W  +L     HGN E
Sbjct: 595 IPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVE 648



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/623 (24%), Positives = 281/623 (45%), Gaps = 90/623 (14%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F+ +LL +L+      S     +  +++       + +GK  H  +       D F+ ++
Sbjct: 39  FNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSS 98

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRE 152
           L+ +Y+  G L  A+ LFD +P +D + WN +L  Y  +G+ GNA       ++F  +R 
Sbjct: 99  LIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNA------IKIFLEMRH 152

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           S    + +T A +L +C S   +     +HG A+  GL  D  V+  L+ +YSK   ++ 
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQA 212

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ LFD + + D+V W  ++  Y +NG   E  HLF  +  +G+ PD  +    L  +++
Sbjct: 213 ARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272

Query: 273 -LGKRHEEQVQAYAI----------------------------KLLLYNNNSNVVLWNKK 303
            L  +H +++  Y I                            K L  +++ + V+    
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTM 332

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           +SGY+  G N  A+E F  +++  ++  SVTF     A AG   LNLG+++HG+ +K+  
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392

Query: 364 YSAVIVGNSLINMYSKMG----------------CVC----------------------- 384
                VG+++++MY+K G                 +C                       
Sbjct: 393 DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQ 452

Query: 385 ----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G R D  +++  L A ++LP  LH  K+IH   IK    +D +  ++LID+Y + G
Sbjct: 453 MGMEGTRYDCVSISGALSACANLP-ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCG 511

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           ++  +  +F+     +  +WN++I  Y    +  + L LF  M  +G + D +T    + 
Sbjct: 512 NLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571

Query: 501 ACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           ACG    + +G + +      Y + +  E   CV+    DM+ + G + +A    N +P 
Sbjct: 572 ACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVA----DMFGRAGRLHEAFETINSMPF 627

Query: 556 PDDVA-WTTMISGCVDNGEEDLA 577
           P D   W T++  C  +G  +LA
Sbjct: 628 PPDAGVWGTLLGACHIHGNVELA 650


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 238/720 (33%), Positives = 360/720 (50%), Gaps = 90/720 (12%)

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           Q+Y I    +  N N  + N  + GY+Q      AI  +  M+ SNV  D+ T+ +   +
Sbjct: 78  QSYQI--FSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ---FTLASVLR 398
            +       G+ I    LK GF S V + N+LINMY+    VCG  +D    F  +SVL 
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYA----VCGNLSDARKVFDGSSVLD 191

Query: 399 ASS--SLPEGLHLSKQIHVHAIKNDTVADSFV--STALIDVYCRNGSMAEAEYLFENKDG 454
             S  S+  G  L   +       D + +  V  S ++I ++ + G++ EA  LF     
Sbjct: 192 MVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQ 251

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            DL +W+A+I  Y  +    +AL LF  M+ +G  +DE+ + + + AC  LL++  GK +
Sbjct: 252 KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLV 311

Query: 515 HAYAMKSGFELDLCVSSGILDM-------------------------------YVKCGAM 543
           H   +K G E  + + + ++ M                               YVKCG +
Sbjct: 312 HGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEI 371

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A+++F+ +P  D+V+W+ MISG          L ++ +M++ G  PDE     ++ A 
Sbjct: 372 EKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISAC 431

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + L AL+QG+ IHA + K     +  +G +L++MY K G +EDA  +FK ++ +    WN
Sbjct: 432 THLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWN 491

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           A+++GLA +G  +++LK F +MK HGV P+ +TF+ VL AC + GLV E + +F+ M ++
Sbjct: 492 ALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQE 551

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           + I P ++HY  +VD LGRAG  KEA ELI SMP     S   ALLGAC+  GD ETG+ 
Sbjct: 552 HKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGER 611

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------- 832
           +  KL+ L P      VLLSNI+A+   W DV   RG M++  V K P            
Sbjct: 612 IGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVH 671

Query: 833 ------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                       + I   ++ + K++K  GY PDT  V LD++EEEKE  L+ HSEKLA 
Sbjct: 672 EFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAI 731

Query: 881 AYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
           A+GLI+  P + I   K     N                       RFHH + G C C D
Sbjct: 732 AFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMD 791



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 154/653 (23%), Positives = 282/653 (43%), Gaps = 67/653 (10%)

Query: 31  LPSFSLS---LLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILN-SSQIP 86
           +P+F+L     LP L+ +H     +  Q+  IL   I  S         +R+L  S+++P
Sbjct: 15  IPTFTLKPTLTLPILE-THLQKCQNIKQFNQILSQMI-LSGFFKDSFAASRLLKFSTELP 72

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
             F+  N             + ++F  + + +    N+++  Y         +  +   +
Sbjct: 73  --FININ------------QSYQIFSHIENPNGFICNTMMKGYMQRN-----SPCKAIWV 113

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           ++ + ES       T   L + C      +  + +  + LK+G   D ++   L+N+Y+ 
Sbjct: 114 YKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAV 173

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + +A+ +FDG    D+V W  ML  Y   G  EE   ++  +    +   +      
Sbjct: 174 CGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASN------ 227

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
             +I   GK+   +    A KL       ++V W+  +S Y Q      A+  F  M  +
Sbjct: 228 -SMIVLFGKKGNVE---EACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNAN 283

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            +  D V  L  L+A +    +  G+ +HG  +K G  + V + N+LI+MYS        
Sbjct: 284 GIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYS-------- 335

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                +   V+ A     E   L               D     ++I  Y + G + +A 
Sbjct: 336 -----SCEEVVTAQKLFSESCCL---------------DQISWNSMISGYVKCGEIEKAR 375

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            LF++    D  +W+AMI GY   +   + L LF  M   G + DE  + + + AC  L 
Sbjct: 376 ALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLA 435

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L QGK +HAY  K+G ++++ + + +++MY+K G + DA  +F  +       W  +I 
Sbjct: 436 ALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALIL 495

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   NG  D +L  + +M+  GV P+E TF  ++ A   +  +++G + H N +  +   
Sbjct: 496 GLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR-HFNSMIQEHKI 554

Query: 627 DPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGE 676
            P +     +VD+  + G +++A  L + M M   V  W A+L    ++G+ E
Sbjct: 555 GPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 6/218 (2%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS--IFNDIPAPDDVAWTTMI 565
           +KQ  Q+ +  + SGF  D   +S +L    +   +   QS  IF+ I  P+     TM+
Sbjct: 39  IKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMM 98

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G +       A+ +Y  M  S V  D +T+ IL ++ S   A   G+ I  +++K+   
Sbjct: 99  KGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFD 158

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           SD ++  +L++MYA CGN+ DA  +F    + + V WN+ML G    GN EE   +++ M
Sbjct: 159 SDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM 218

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
                E + +    ++      G V EA + F+ M++K
Sbjct: 219 P----ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQK 252



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 19/250 (7%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y     F+ +L+ F +     +    +   S++      + L  GK  HA I  +    +
Sbjct: 396 YAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKIN 455

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             L   L+ MY + G +  A  +F  + ++ + +WN+++   A +G      V +  + F
Sbjct: 456 IILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGL-----VDKSLKTF 510

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL---KIGLVWDEFVSGALVNIY 204
             ++E     + +T   +L  C   G V          +   KIG     +  G +V++ 
Sbjct: 511 SEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHY--GCMVDLL 568

Query: 205 SKFGKIREAKFLFDGM-QERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDD 260
            + G ++EA+ L + M    DV  W  +L   + Y +N  GE +    V+LH     PD 
Sbjct: 569 GRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELH-----PDH 623

Query: 261 ESVQCVLGVI 270
           +    +L  I
Sbjct: 624 DGFNVLLSNI 633


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 243/771 (31%), Positives = 391/771 (50%), Gaps = 65/771 (8%)

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKI 210
           S+        A  L+ C++ G       VHG+ ++ G V   D F +  L+N+Y K G +
Sbjct: 53  SVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPL 112

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
             A+ LFD M ER++V +  +++A+A+ G  E    LF  L   G     E  Q VL  +
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG----HEVNQFVLTTM 168

Query: 271 SDLGKRHEEQ-----VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
             L    +       V + A KL    ++ N  + +  +  Y        A   F  ++R
Sbjct: 169 LKLAIAMDAAGLAGGVHSCAWKL---GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVR 225

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
                D+V +   ++  +  D                         +   ++SKM  V G
Sbjct: 226 K----DAVVWTAMVSCYSEND----------------------CPENAFRVFSKMR-VSG 258

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + + F L SVL+A+  LP  + L K IH  AIK     +  V  AL+D+Y + G + +A
Sbjct: 259 CKPNPFALTSVLKAAVCLPSVV-LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              FE     D+   + MI  Y  SN + +A ELF  +  S    +E ++++ ++AC  +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           + L  GKQ+H +A+K G E DL V + ++D Y KC  M  +  IF+ +   ++V+W T++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   +G  + ALS++ +M+ + +   + T++ +++A +   ++    QIH ++ K   +
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +D  +G SL+D YAKCG I DA  +F+ +  R+ + WNA++ G A HG   + L+LF+ M
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
               VE + +TF+ +LS CS TGLV+     F  MR  +GI+P +EHY+ +V  LGRAGR
Sbjct: 558 NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGR 617

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             +A + I  +P   SA + RALL +C +  +   G++ AEK++ +EP D + YVLLSN+
Sbjct: 618 LNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNM 677

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +AAA   D V   R  M+   V+K P                         +I A +E L
Sbjct: 678 YAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWL 737

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
             +    GY+PD + VL DV++E+K R L+ HSE+LA AYGL+ TPP   I
Sbjct: 738 NLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPI 788



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 164/658 (24%), Positives = 295/658 (44%), Gaps = 93/658 (14%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           L+  I+  D   G++ H  ++    +   D F  N L+ MY + G L  ARRLFD+MP+R
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++S+ +++ A+A  G+  A        LFR LR      ++  L  +LKL ++      
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAA-----LFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGL 180

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH  A K+G   + FV   L++ YS    + +A+ +F+G+  +D V+W  M+  Y+E
Sbjct: 181 AGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE 240

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL------------------------------ 267
           N   E  F +F  +  SG  P+  ++  VL                              
Sbjct: 241 NDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHV 300

Query: 268 -GVISDL-GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
            G + D+  K  + +    A +++ Y+   +V+L +  +S Y Q   N  A E F+ ++R
Sbjct: 301 GGALLDMYAKCGDIKDARLAFEMIPYD---DVILLSFMISRYAQSNQNEQAFELFLRLMR 357

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------ 379
           S+V  +  +    L A      L+ G+QIH   +K G  S + VGN+L++ Y+K      
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 380 --------------------------------MGCVCGLRT-----DQFTLASVLRASSS 402
                                           +   C ++       Q T +SVLRA +S
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                H + QIH    K+    D+ +  +LID Y + G + +A  +F++    D+ +WNA
Sbjct: 478 TASIRH-AGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 536

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKS 521
           +I GY L   +  ALELF  M+ S    ++IT    +  C    ++  G  +  +  +  
Sbjct: 537 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDH 596

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
           G +  +   + I+ +  + G + DA     DIP AP  + W  ++S C+ +  +++AL  
Sbjct: 597 GIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH--KNVALGR 654

Query: 581 YHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           +   ++  + P DE T+ +L    +   +L+Q   +  ++  +     P  G+S V++
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP--GLSWVEI 710



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 18  VIFSSFTKDTY----RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGK 73
           VI  SF    Y    +N  +F L  L  ++ S   +  S S   S+L+   +   L  GK
Sbjct: 329 VILLSFMISRYAQSNQNEQAFEL-FLRLMRSSVLPNEYSLS---SVLQACTNMVQLDFGK 384

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
             H   +      D F+ N LM  Y++C  +  + ++F  + D + +SWN+I+  ++ SG
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSG 444

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
            G      E   +F  ++ +    +++T + +L+ C S+  +  +  +H    K     D
Sbjct: 445 LGE-----EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 499

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             +  +L++ Y+K G IR+A  +F  + ERD++ W  ++  YA +G   +   LF  +++
Sbjct: 500 TVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK 559

Query: 254 SGLCPDDESVQCVLGVISDLG 274
           S +  +D +   +L V S  G
Sbjct: 560 SNVESNDITFVALLSVCSSTG 580


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  365 bits (937), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 257/842 (30%), Positives = 392/842 (46%), Gaps = 156/842 (18%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF----GKIREAKFLFD 218
           A LL+LC ++    A   +H  A+K GL+   ++   L++ Y +     G +R+A+ LFD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 219 --GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
              +  R+V  W  +L  +A++G   +   +F ++      P+ ++V             
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEM------PERDAVS------------ 131

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                  W   + G  + G    AI+  ++M          T  
Sbjct: 132 -----------------------WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLT 168

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
             L++ A T    +G+++H   +K G  S V V NS++NMY K G       D  T  +V
Sbjct: 169 NVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG-------DSETATTV 221

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                         +++ V ++ +          A++ +    G M  AE LFE+     
Sbjct: 222 F-------------ERMPVRSVSS--------WNAMVSLNTHLGRMDLAESLFESMPDRS 260

Query: 457 LATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           + +WNAMI GY  +    KAL+LFS M H S    DE TI + + AC  L  ++ GKQ+H
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320

Query: 516 AYAM-------------------KSG------------FELDLCVSS--GILDMYVKCGA 542
           AY +                   KSG             E DL V S   +L+ YVK G 
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           M  A+ +F  +   D VAWT MI G   NG  D A+ ++  M   G  P+ +T A ++  
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN-TVL 661
            + L  L+ G+QIH   I+        V  +++ MYA+ G+   A  +F Q+  R  T+ 
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           W +M+V LAQHG GEE + LFE+M   GVEPD +T++GVLSACS+ G V+E    +  ++
Sbjct: 501 WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIK 560

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
            ++ I PE+ HY+ +VD L RAG   EA E I  MP E  A    +LL ACRV  + E  
Sbjct: 561 NEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 620

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------- 832
           +  AEKL++++P +S AY  ++N+++A  +W D        K K V+K+           
Sbjct: 621 ELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSK 680

Query: 833 --------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                         D ++A    + + IK  G+VPD   VL DV++E KE  L  HSEKL
Sbjct: 681 IHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKL 740

Query: 879 ARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
           A A+GLISTP  + +                     ++++E +   A RFHH RDG+C C
Sbjct: 741 AIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSC 800

Query: 916 AD 917
            D
Sbjct: 801 KD 802



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 208/502 (41%), Gaps = 113/502 (22%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P R ++  N ++++ +  G +  A  LF+ MPDR ++SWN+++A Y  +G        
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLD-----A 278

Query: 142 EGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           +  +LF R L ES       T+  +L  C + G V   + VH Y L+  + ++  V+ AL
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338

Query: 201 VNIYSKFGKIREAKFLFDGMQERD--VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           ++ Y+K G +  A+ + D   E D  V+ +  +L  Y + G                   
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG------------------- 379

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           D ES + + GV+                      NN +VV W   + GY Q G N  AI+
Sbjct: 380 DMESAREMFGVM----------------------NNRDVVAWTAMIVGYEQNGRNDEAID 417

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F +MI    + +S T    L+  A    L+ G+QIH   ++S    +  V N++I MY+
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 477

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           + G                    S P    +  Q+     + +T+      T++I    +
Sbjct: 478 RSG--------------------SFPWARRMFDQV---CWRKETI----TWTSMIVALAQ 510

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           +G   EA  LFE                                M  +G   D IT    
Sbjct: 511 HGQGEEAVGLFE-------------------------------EMLRAGVEPDRITYVGV 539

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
           + AC     + +GK+ +   +K+  ++  ++   + ++D+  + G   +AQ     +P  
Sbjct: 540 LSACSHAGFVNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE 598

Query: 556 PDDVAWTTMISGCVDNGEEDLA 577
           PD +AW +++S C  +   +LA
Sbjct: 599 PDAIAWGSLLSACRVHKNAELA 620



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 44/264 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK---- 113
           S+L    +  ++ +GK  HA IL +    +  +TN L++ Y++ GS+  ARR+ D+    
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 361

Query: 114 -----------------------------MPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
                                        M +RD+++W +++  Y  +G  +     E  
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND-----EAI 416

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LFRS+       +  TLA +L +C S   +   + +H  A++  L     VS A++ +Y
Sbjct: 417 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMY 476

Query: 205 SKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           ++ G    A+ +FD +   ++ + W  M+ A A++G GEE   LF ++ R+G+ PD  + 
Sbjct: 477 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITY 536

Query: 264 QCVLGVIS-----DLGKRHEEQVQ 282
             VL   S     + GKR+ +Q++
Sbjct: 537 VGVLSACSHAGFVNEGKRYYDQIK 560



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  GK  H R + S       ++N ++TMY+R GS  +ARR+FD++  R
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 495

Query: 118 -DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            + I+W S++ A A  G+G      E   LF  +  +     R+T   +L  C  +G+V 
Sbjct: 496 KETITWTSMIVALAQHGQGE-----EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVN 550

Query: 177 ASETVHGYALKIGLVWDEFVSGA-LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             +  +        +  E    A +V++ ++ G   EA+     M  E D + W  +L A
Sbjct: 551 EGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 610


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  365 bits (937), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 202/558 (36%), Positives = 311/558 (55%), Gaps = 58/558 (10%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++ +H H   N     +F+   LI++Y + G + EA  LF+     ++ +W  MI  Y  
Sbjct: 35  ARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSN 94

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           SN +HKAL+    M   G R +  T ++ ++AC  LL L+Q   +H   +K G E D+ V
Sbjct: 95  SNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQ---LHGSILKVGLESDVFV 151

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S ++D Y K G   DA ++FN++   D V W ++I G   N + D  L +Y +M+ +  
Sbjct: 152 RSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADF 211

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
           V D+ T   +++A + L  LE GRQ+H +++K D   D  +  +L+DMY KCG++EDA +
Sbjct: 212 VADQSTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANL 269

Query: 650 LF-KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           LF + M  ++ + W+ M+ GLAQ+G   + LKLFE MK+ G +P+ +T +GVL ACS+ G
Sbjct: 270 LFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAG 329

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV++ +  F  M+E +GI+P  EHY  ++D LGRAG+  EA +LI  M  E  A   R L
Sbjct: 330 LVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRIL 389

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGACRV  + +   + A++++ L+P D+  Y+LLSNI+A + +W+DV   R +M+ + VK
Sbjct: 390 LGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVK 449

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           KDP                        + I  ++  LI+R+   GYVPDT+FVL D+E E
Sbjct: 450 KDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGE 509

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVI---------------------LSN-----KEP 899
           + E +L YHSEKLA  +GL+S P    I                     L N     ++P
Sbjct: 510 QMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDP 569

Query: 900 LYANRFHHLRDGMCPCAD 917
           +   R+HH R G+C C D
Sbjct: 570 I---RYHHFRGGVCSCGD 584



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 153/285 (53%), Gaps = 9/285 (3%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           KA+E    MH +    D IT +  +K C     ++Q + +H +   +G+E    + + ++
Sbjct: 2   KAMEA---MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLI 58

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +MYVK G + +A+++F+++P  + V+WTTMIS   ++     AL     M   GV P+ +
Sbjct: 59  NMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMY 118

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T++ +++A   L  L   RQ+H +++K+   SD FV  +L+D Y+K G   DA  +F +M
Sbjct: 119 TYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM 175

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              + V+WN+++ G AQ+ +G+ETL L++ MK      D  T   VL AC+   L+ E  
Sbjct: 176 ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALL-ELG 234

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
              H+   KY  + ++   + L+D   + G  ++A  L   M  E
Sbjct: 235 RQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANLLFTRMMTE 277



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 188/416 (45%), Gaps = 67/416 (16%)

Query: 323 MIRSNVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           M R+ +  D++T+  L+    V G   +   + +H     +G+     + N+LINMY K 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGA--VQQARLVHEHVFSNGYEPKTFLINTLINMYVKF 64

Query: 381 GCVC-------------------------------------------GLRTDQFTLASVL 397
           G +                                            G+R + +T +SVL
Sbjct: 65  GLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVL 124

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           RA     +GL   +Q+H   +K    +D FV +ALID Y + G   +A  +F      DL
Sbjct: 125 RAC----DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDL 180

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
             WN++I G+  +++  + L L+  M  +    D+ T+ + ++AC  L +L+ G+Q+H +
Sbjct: 181 VVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVH 240

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDL 576
            +K  ++ DL +++ +LDMY KCG++ DA  +F  +    DV +W+TMI+G   NG    
Sbjct: 241 VLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSAD 298

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGIS 633
           AL ++  M+  G  P+  T   ++ A S    +  G    Q       +D   + +  I 
Sbjct: 299 ALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCI- 357

Query: 634 LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN-------GEETLKL 681
            +D+  + G +++A  L  +M+   + V W  +L     H N        +E LKL
Sbjct: 358 -IDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKL 412



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 41/321 (12%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           ++R A+  + L+     H  + ++   P  FL N L+ MY + G L  AR LFD+MPDR+
Sbjct: 27  LVRGAVQQARLV-----HEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRN 81

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW ++++AY++S   N  +    F L   LRE +   +  T + +L+ C   G +   
Sbjct: 82  VVSWTTMISAYSNS---NLNHKALDF-LILMLREGVR-PNMYTYSSVLRAC--DGLLNLR 134

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +HG  LK+GL  D FV  AL++ YSK G+  +A  +F+ M   D+V+W  ++  +A+N
Sbjct: 135 Q-LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYN- 292
             G+E  HL+  + R+    D  ++  VL   +     +LG++    V  Y   L+L N 
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNA 253

Query: 293 ----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                                    +V+ W+  ++G  Q G +  A++ F  M     + 
Sbjct: 254 LLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKP 313

Query: 331 DSVTFLVALAAVAGTDNLNLG 351
           + +T L  L A +    +N G
Sbjct: 314 NYITILGVLFACSHAGLVNDG 334



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 179/448 (39%), Gaps = 90/448 (20%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           +T + L+K CL  G V  +  VH +    G     F+   L+N+Y KFG + EA+ LFD 
Sbjct: 17  ITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDE 76

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------------ 267
           M +R+VV W  M+ AY+ +    +     + + R G+ P+  +   VL            
Sbjct: 77  MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQL 136

Query: 268 -GVISDLGKRHEEQVQAYAIK-----------LLLYNN--NSNVVLWNKKLSGYLQVGDN 313
            G I  +G   +  V++  I            L ++N     ++V+WN  + G+ Q  D 
Sbjct: 137 HGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDG 196

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
              +  +  M R++   D  T    L A  G   L LG+Q+H   LK  +   +I+ N+L
Sbjct: 197 DETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNAL 254

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++MY    C CG   D   L + +                        T  D    + +I
Sbjct: 255 LDMY----CKCGSLEDANLLFTRMM-----------------------TEKDVISWSTMI 287

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
               +NG  A+                               AL+LF  M + G + + I
Sbjct: 288 AGLAQNGFSAD-------------------------------ALKLFEAMKSKGPKPNYI 316

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFN 551
           TI   + AC    ++  G   +  +MK  F +D        I+D+  + G + +A  + +
Sbjct: 317 TILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIH 375

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLAL 578
           ++   PD V W  ++  C  +   DLA+
Sbjct: 376 EMNHEPDAVTWRILLGACRVHKNVDLAI 403



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 11/218 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR   +   LL  +  H  IL      D F+ + L+  YS+ G    A  +F++M   
Sbjct: 122 SVLR---ACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG 178

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+ WNSI+  +A + +G+     E   L++ ++ +     + TL  +L+ C     +  
Sbjct: 179 DLVVWNSIIGGFAQNSDGD-----ETLHLYKRMKRADFVADQSTLTSVLRACTGLALLEL 233

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYA 236
              VH + LK     D  ++ AL+++Y K G + +A  LF  M  E+DV+ W  M+   A
Sbjct: 234 GRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLA 291

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +NGF  +   LF  +   G  P+  ++  VL   S  G
Sbjct: 292 QNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAG 329


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  365 bits (936), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 252/881 (28%), Positives = 415/881 (47%), Gaps = 111/881 (12%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MPDR   +W + ++     G   A      F L R +RE     S   LA L+  C   G
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVA-----AFELLRGMRERGVPLSGFALASLVTACERRG 55

Query: 174 Y---VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
               +     +H    + GL+ + ++  AL+++Y   G + +A+ LF  M ER+VV W  
Sbjct: 56  RDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTA 115

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLL 289
           ++ A + NG+ EE    +  + R G+  +  +   V+ +   L       QV ++ I   
Sbjct: 116 LMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSG 175

Query: 290 LYNN----NSNVVLW------------------------NKKLSGYLQVGDNHGAIECFV 321
           L N     NS + ++                        N  +S Y   G        F 
Sbjct: 176 LQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFS 235

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           +M    ++ D+ T    ++  A  D+ + G  IH   L+S   S+V V N+L+NMYS  G
Sbjct: 236 DMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295

Query: 382 CVC--------------------------------GLRT-----------DQFTLASVLR 398
            +                                  L+T           +  T +S L 
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALG 355

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A SS P  L   K +H   ++     +  V  +LI +Y +  SM +AE +F++    D+ 
Sbjct: 356 ACSS-PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVV 414

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL----MLKQGKQM 514
           ++N +I GY +  +  KA+++FS + ++G + + IT+   +   G       +   G+ +
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITM---INIHGSFTSSNDLHNYGRPL 471

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           HAY +++GF  D  V++ ++ MY KCG +  + +IFN I   + V+W  +I+     G  
Sbjct: 472 HAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHG 531

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           + AL ++  M+ +G   D    A  + + + L +LE+G Q+H   +K    SD +V  + 
Sbjct: 532 EEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA 591

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +DMY KCG + +   +     +R    WN ++ G A++G  +E  + F+ M A G +PD 
Sbjct: 592 MDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDY 651

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           VTF+ +LSACS+ GLV +  + ++ M   +G+ P ++H   +VD LGR GR  EA   I 
Sbjct: 652 VTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIE 711

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            MP   +  + R+LL + R   + E G+  A+KL+ L+PFD SAYVLLSN++A   +W D
Sbjct: 712 EMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVD 771

Query: 815 VTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGY 851
           V   R  MK  N+ K P                       A+ I+AK++ ++ +++E GY
Sbjct: 772 VDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGY 831

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           + DT   L D +EE+KE+ L+ HSEKLA AYGLI  P  S 
Sbjct: 832 IADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGST 872



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/680 (22%), Positives = 296/680 (43%), Gaps = 81/680 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G + HA    +  + + ++   L+ +Y   G +  ARRLF +MP+R+++SW +++ A + 
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G      + E  R +R +R      +    A ++ LC S         V  + +  GL 
Sbjct: 123 NGY-----LEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQ 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V+ +L+ ++   G++++A+ LFD M+E D +    M+  Y+  G   + F +F D+
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 252 HRSGLCPD----------------------------DESVQCVLGVISDLGKRHEEQVQA 283
              GL PD                              S+   + VI+ L   +    + 
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 284 YAIKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
              + L +N +  +++ WN  +S Y+Q  ++  A++    +  +N   + +TF  AL A 
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
           +    L  G+ +H   L+      ++VGNSLI MY K   +                   
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417

Query: 384 ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G++ +  T+ ++  + +S  +  +  + +H + I+
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIR 477

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
              ++D +V+ +LI +Y + G++  +  +F +    ++ +WNA+I       +  +AL+L
Sbjct: 478 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKL 537

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M  +G +LD + +A  + +C  L  L++G Q+H   MKSG + D  V +  +DMY K
Sbjct: 538 FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGK 597

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG M +   +  D        W T+ISG    G    A   + QM   G  PD  TF  L
Sbjct: 598 CGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVAL 657

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD-M 656
           + A S    +++G   + N +       P +   + +VD+  + G   +A    ++M  +
Sbjct: 658 LSACSHAGLVDKGIDYY-NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVL 716

Query: 657 RNTVLWNAMLVGLAQHGNGE 676
            N ++W ++L     H N E
Sbjct: 717 PNDLIWRSLLSSSRTHKNLE 736



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 51/317 (16%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S   L+ GK  HA +L  S   +  + N+L+TMY +C S+  A ++F  MP  D++S+N 
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNV 418

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA-SETVHG 183
           ++  YA   +G     T+  ++F  +R +    + +T+  +     SS  +      +H 
Sbjct: 419 LIGGYAVLEDG-----TKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHA 473

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           Y ++ G + DE+V+ +L+ +Y+K G +  +  +F+ +  +++V W  ++ A A+ G GEE
Sbjct: 474 YIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEE 533

Query: 244 VFHLFVDLH-----------------------------------RSGLCPDDESVQCVLG 268
              LF+D+                                    +SGL  D   V   + 
Sbjct: 534 ALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMD 593

Query: 269 VISDLGKRHE--EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           +    GK +E  + V   AI+            WN  +SGY + G    A E F  M+  
Sbjct: 594 MYGKCGKMNEMLQMVPDQAIR--------PQQCWNTLISGYAKYGYFKEAEETFKQMVAM 645

Query: 327 NVQYDSVTFLVALAAVA 343
             + D VTF+  L+A +
Sbjct: 646 GRKPDYVTFVALLSACS 662


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  365 bits (936), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 243/828 (29%), Positives = 388/828 (46%), Gaps = 99/828 (11%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           + LLK   S+       TVH   +  GL      SG L++ Y++      +  +F  +  
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 223 -RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD---------------DESVQCV 266
             +V LW  ++RA   NG   +    + ++    L PD               D  + C+
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 267 -------LGVISDLGKRHEEQVQAYAIKLLLYN--------NNSNVVLWNKKLSGYLQVG 311
                  +G  SDL       +  Y+  + L N        +N + V WN  +SGY   G
Sbjct: 143 VHEHAMEMGFESDL-YIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A++ +     + +  D  T    L A      +  G  +HG   K G    VI+GN
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGN 261

Query: 372 SLINMYSK------------------------------------------MGCVCGLRTD 389
            L++MY K                                          M  + G   D
Sbjct: 262 GLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPD 321

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
             ++ S +RA     + L + K +H + I +    D+     LID+Y + G +  A+ +F
Sbjct: 322 MLSITSTIRACGQSGD-LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +     D  TWN++I GY  S    + LE F  M     + D +T    +     L  + 
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQLADIN 439

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           QG+ +H   +K GFE +L + + +LD+Y KCG M D   +F+ + A D ++W T+I+  V
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
              +  +   + ++MR  G++PDE T   ++   S L    QG++IH  + K    S+  
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +G +L++MY+KCG++E+   +FK M  ++ V W A++     +G G++ LK F+DM+  G
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSG 619

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           V PDSV FI  + ACS++G+V E    F  M+  Y +EP +EHY+ +VD L R+G   +A
Sbjct: 620 VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQA 679

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            E ILSMP +  AS+  ALL ACR +G+T   + V++K++ L   D+  YVL+SNI+A  
Sbjct: 680 EEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATL 739

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
            +WD V + R  MK K +KK+P                        D +   +E L++ +
Sbjct: 740 GKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVIL 894
            + GYV D  F L DVEE++K   L  HSE+LA A+GL++T P S +L
Sbjct: 800 AKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLL 847



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 171/713 (23%), Positives = 315/713 (44%), Gaps = 96/713 (13%)

Query: 45  SHFSSSSSSSQWF---SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           S+F+++   SQ F   S+L+   S  +    ++ H+ I+ S        +  L++ Y++ 
Sbjct: 8   SNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQV 67

Query: 102 GSLVYARRLFDKM-PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
              + +  +F  + P  ++  WNSI+ A  H+G       T+    +  +RE        
Sbjct: 68  KDPISSVSVFRSISPTNNVYLWNSIIRALTHNGL-----FTQALGYYTEMREKKLQPDAF 122

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   ++  C     +     VH +A+++G   D ++  AL+++YS+F  +  A+++F+ M
Sbjct: 123 TFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEM 182

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------------- 267
             RD V W  ++  Y  NGF E+   ++     +G+ PD  ++  VL             
Sbjct: 183 SNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGV 242

Query: 268 ---GVISDLG------------------KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
              GVI  +G                  +R  E  + ++ K+ + ++    V WN  + G
Sbjct: 243 AVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS-KMAVKDS----VTWNTMICG 297

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q+G +  +++ F++MI   V  D ++    + A   + +L +G+ +H   + SGF   
Sbjct: 298 YAQLGRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECD 356

Query: 367 VIVGNSLINMYSKMGCVC--------------------------------GL-------- 386
            +  N LI+MY+K G +                                 GL        
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM 416

Query: 387 --RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
             + D  T   +L   S L + ++  + IH   IK    A+  +  +L+DVY + G M +
Sbjct: 417 ERKPDSVTFVLLLSIFSQLAD-INQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
              +F      D+ +WN +I   +  ++     ++ + M T G   DE T+   +  C  
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L + +QGK++H Y  KSGFE ++ + + +++MY KCG++ +   +F  +   D V WT +
Sbjct: 536 LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTAL 595

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           IS     GE   AL  +  M LSGV+PD   F   + A S    +++G +   + +K D 
Sbjct: 596 ISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFF-DRMKTDY 654

Query: 625 SSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           + +P +     +VD+ A+ G +  A      M M+ +  LW A+L      GN
Sbjct: 655 NLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 260/605 (42%), Gaps = 90/605 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++       DL LG   H   +      D ++ N L+ MYSR   L  AR +F++M +R
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWNS+++ Y  +G        +   ++   R +       T++ +L  C S   V  
Sbjct: 186 DSVSWNSLISGYCSNGFWE-----DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VHG   KIG+  D  +   L+++Y KF ++REA+ +F  M  +D V W  M+  YA+
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL------- 290
            G  E    LF+D+   G  PD  S+      I   G+  + QV  +  K L+       
Sbjct: 301 LGRHEASVKLFMDM-IDGFVPDMLSIT---STIRACGQSGDLQVGKFVHKYLIGSGFECD 356

Query: 291 -------------------------YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         + V WN  ++GY Q G     +E F  M++
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMK 415

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---- 381
              + DSVTF++ L+  +   ++N G+ IH   +K GF + +I+GNSL+++Y+K G    
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 382 ----------------------------CVCG------LRT-----DQFTLASVLRASSS 402
                                       C  G      +RT     D+ T+  +L   S 
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L       K+IH +  K+   ++  +  ALI++Y + GS+     +F+     D+ TW A
Sbjct: 536 LAVRRQ-GKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTA 594

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I  + +     KAL+ F  M  SG   D +     + AC    M+K+G +     MK+ 
Sbjct: 595 LISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD-RMKTD 653

Query: 523 FELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
           + L+  +   + ++D+  + G +  A+     +P  PD   W  ++S C   G  ++A  
Sbjct: 654 YNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQR 713

Query: 580 IYHQM 584
           +  ++
Sbjct: 714 VSKKI 718



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 217/439 (49%), Gaps = 18/439 (4%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           + +F  +S+L+  SS      L + +H   I +        S  LI  Y +      +  
Sbjct: 17  SQEFLRSSLLKTLSSAKNTPQL-RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVS 75

Query: 448 LFEN-KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
           +F +     ++  WN++I     +    +AL  ++ M     + D  T  + + +C  +L
Sbjct: 76  VFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARIL 135

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L+ G  +H +AM+ GFE DL + + ++DMY +   + +A+ +F ++   D V+W ++IS
Sbjct: 136 DLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLIS 195

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   NG  + AL +YH+ R++G+VPD FT + ++ A   L A+++G  +H  + K+  + 
Sbjct: 196 GYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAG 255

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D  +G  L+ MY K   + +A  +F +M ++++V WN M+ G AQ G  E ++KLF DM 
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM- 314

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G  PD ++    + AC  +G + +  +  H      G E +    + L+D   + G  
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDL-QVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDL 373

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV----AEKLMALE-PFDSSAYVL 801
             A E+  +   + S + +        + G T++G +     + K+M +E   DS  +VL
Sbjct: 374 LAAQEVFDTTKCKDSVTWNSL------INGYTQSGYYKEGLESFKMMKMERKPDSVTFVL 427

Query: 802 LSNIFAAANQWDDVTSARG 820
           L +IF+   Q  D+   RG
Sbjct: 428 LLSIFS---QLADINQGRG 443


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 236/726 (32%), Positives = 370/726 (50%), Gaps = 54/726 (7%)

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           +  +++ Y K G +  A+ LFD M +R VV W +++  YA N   +E F LF  + RS  
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 257 CPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
            PD  +   +L   +D + +    QV A+A+KL  ++ N  + + N  L  Y +V     
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNLFLTVCNVLLKSYCEVRRLDL 196

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A   F  ++      DSVTF          + L  G +      K G Y+  I      +
Sbjct: 197 ACVLFEEILDK----DSVTF----------NTLITGYE------KDGLYTEAI------H 230

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           ++ KM    G +   FT + VL+A   L +   L +Q+H  ++      D+ V   ++  
Sbjct: 231 LFLKMR-QSGHKPSDFTFSGVLKAVVGLHD-FALGQQLHGLSVTTGFSRDASVGNQILHF 288

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y ++  + E   LF      D  ++N +I  Y  +    ++L LF  M   G        
Sbjct: 289 YSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPF 348

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           AT +     L  L+ G+Q+H  A+ +  +  L V + ++DMY KC    +A+ IF  +  
Sbjct: 349 ATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQ 408

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              V+WT +ISG V  G     L ++ +MR + +  D+ TFA ++KAS+   +L  G+Q+
Sbjct: 409 RSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQL 468

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           HA +I+     + F G  LVDMYAKCG+I+DA  +F++M  RN V WNA++   A +G+G
Sbjct: 469 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDG 528

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           E  +  F  M   G++PDSV+ +GVL ACS+ G V +  E F  M   YGI P+ +HY+ 
Sbjct: 529 EAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYAC 588

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF- 794
           ++D LGR GR  EA +L+  MPFE    M  ++L ACR+  +    +  AE+L ++E   
Sbjct: 589 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLR 648

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           D++AYV +SNI+AAA +W++V   +  M+ + +KK PA                      
Sbjct: 649 DAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 708

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            D I  K+  L   I+  GY PDT  V+ D++E+ K  +L YHSE+LA A+ LISTP   
Sbjct: 709 GDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGC 768

Query: 892 VILSNK 897
            I+  K
Sbjct: 769 PIVVMK 774



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 148/605 (24%), Positives = 262/605 (43%), Gaps = 90/605 (14%)

Query: 61  RHAISTSDLLLGKSTHARILNSSQIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           R   +  DLL      A +    ++P +    TN +++ Y + G L  AR LFD MPDR 
Sbjct: 46  RSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRT 105

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           +++W  ++  YA    GN  +  E F+LFR +  S T    +T   LL  C  +    A 
Sbjct: 106 VVTWTILMGWYA----GN-NHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAV 160

Query: 179 ETVHGYALKIGLVWDEF--VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             VH +A+K+G   + F  V   L+  Y +  ++  A  LF+ + ++D V +  ++  Y 
Sbjct: 161 GQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYE 220

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE----EQVQAYAIK----- 287
           ++G   E  HLF+ + +SG  P D +   VL  +  L   H+    +Q+   ++      
Sbjct: 221 KDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL---HDFALGQQLHGLSVTTGFSR 277

Query: 288 --------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMI 324
                   L  Y+ +  V               V +N  +S Y Q      ++  F  M 
Sbjct: 278 DASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQ 337

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK----- 379
                  +  F   L+  A   +L +G+Q+H   + +   S + VGNSL++MY+K     
Sbjct: 338 CMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFD 397

Query: 380 -----------------MGCVCG---------------------LRTDQFTLASVLRASS 401
                               + G                     LR DQ T A+VL+AS+
Sbjct: 398 EAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASA 457

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                L L KQ+H   I++  + + F  + L+D+Y + GS+ +A  +FE     +  +WN
Sbjct: 458 GFAS-LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWN 516

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMK 520
           A+I  Y  + +   A+  F+ M  SG + D ++I   + AC     ++QG +   A +  
Sbjct: 517 ALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPI 576

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G        + +LD+  + G   +A+ + +++P  PD++ W+++++ C     + LA  
Sbjct: 577 YGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAER 636

Query: 580 IYHQM 584
              Q+
Sbjct: 637 AAEQL 641



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 150/369 (40%), Gaps = 51/369 (13%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FL+        S   +  +L+  +   D  LG+  H   + +    D  + N ++  YS+
Sbjct: 232 FLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSK 291

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR- 159
              ++  R LF++MP+ D +S+N ++++Y+      AE   E   LFR + + + F  R 
Sbjct: 292 HDRVLETRNLFNEMPELDFVSYNVVISSYSQ-----AEQYEESLNLFREM-QCMGFDRRN 345

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
              A +L +  +   +     VH  A+         V  +LV++Y+K     EA+ +F  
Sbjct: 346 FPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKS 405

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LG 274
           + +R  V W  ++  Y + G       LF  +  + L  D  +   VL   +      LG
Sbjct: 406 LSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLG 465

Query: 275 KRHEEQVQAY----------------------------AIKLLLYNNNSNVVLWNKKLSG 306
           K    Q+ A+                            A+++     + N V WN  +S 
Sbjct: 466 K----QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 521

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTL 359
           Y   GD   AI  F  MI+S +Q DSV+ L  L A +       GT+       I+G T 
Sbjct: 522 YADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITP 581

Query: 360 KSGFYSAVI 368
           K   Y+ ++
Sbjct: 582 KKKHYACML 590



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 100/186 (53%), Gaps = 7/186 (3%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           +  S + ++L+ +   + LLLGK  HA I+ S  + + F  + L+ MY++CGS+  A ++
Sbjct: 444 ADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 503

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           F++MPDR+ +SWN++++AYA +G+G A         F  + +S      +++  +L  C 
Sbjct: 504 FEEMPDRNAVSWNALISAYADNGDGEA-----AIGAFTKMIQSGLQPDSVSILGVLIACS 558

Query: 171 SSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLW 228
             G+V   +E     +   G+   +     ++++  + G+  EA+ L D M  E D ++W
Sbjct: 559 HCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 618

Query: 229 KVMLRA 234
             +L A
Sbjct: 619 SSVLNA 624


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 258/843 (30%), Positives = 397/843 (47%), Gaps = 157/843 (18%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK-----IREAKFLF 217
           A LL+ C ++    A   +H  A+K GL+   ++   L++ Y+          REA+ LF
Sbjct: 27  ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86

Query: 218 DGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           D +   +R+V  W  +L  YA++G   +   +F ++      P+ + V            
Sbjct: 87  DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEM------PERDPVS----------- 129

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                                   W   + G  +VG    AI+ F++M+   +     T 
Sbjct: 130 ------------------------WTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTL 165

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
              L++ A T+   +G+++H   +K G  S V V NS++NMY K G       D  T  +
Sbjct: 166 TNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCG-------DAETARA 218

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           V      +PE             ++ +  ++ VS   +D +   G M  A  LFEN    
Sbjct: 219 VF---ERMPE-------------RSVSSWNAMVS---LDAHL--GRMDLALSLFENMPDR 257

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQM 514
            + +WNA+I GY  +  + KAL  FS M + S    DE TI + + AC  L M+  GKQ+
Sbjct: 258 TIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQV 317

Query: 515 HAYAMKSGF---------------------------------ELDLCVSSGILDMYVKCG 541
           HAY ++S                                   +L++   + +L+ YVK G
Sbjct: 318 HAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLG 377

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            M  A+ +F+ +   D VAWT MI G   NG  D A+ ++  M  SG  P+ +T A ++ 
Sbjct: 378 DMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLS 437

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN-TV 660
             + L  LE G+QIH   I+        V  S+V MYA+ G++  A  +F ++  R  TV
Sbjct: 438 VCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETV 497

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +M+V LAQHG GE+ + LFE+M   GV+PD +TF+GVLSAC++ G V E    F  +
Sbjct: 498 TWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQL 557

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           ++K+GI PE+ HY+ +VD L RAG   EA E I  MP E  A    +LL ACRV  + + 
Sbjct: 558 QDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADL 617

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
            +  AEKL++++P +S AY  LSN+++A  +W+D        K K+VKK+          
Sbjct: 618 AELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGN 677

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                          D ++     +   IK+ G+VPD   VL DV++E KE  L  HSEK
Sbjct: 678 RVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEK 737

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCP 914
           LA A+GL+STP  + +                     ++++E +   A RFHH +DG C 
Sbjct: 738 LAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCS 797

Query: 915 CAD 917
           C D
Sbjct: 798 CKD 800



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 145/357 (40%), Gaps = 76/357 (21%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P+R ++  N ++++ +  G +  A  LF+ MPDR ++SWN+++A Y  +G     N  
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL----NAK 277

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-----IGLVWDEFV 196
             +   R L  S       T+  +L  C + G V   + VH Y L+     IG V +  +
Sbjct: 278 ALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALI 337

Query: 197 S----------------------------GALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           S                             AL+  Y K G ++ A+ +FD M  RDVV W
Sbjct: 338 SMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAW 397

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK 287
             M+  Y +NG  +E   LF  + RSG  P+  +V  VL V + L    + +Q+   AI+
Sbjct: 398 TAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIR 457

Query: 288 LLLYNNNS-----------------------------NVVLWNKKLSGYLQVGDNHGAIE 318
            L   ++S                               V W   +    Q G    A+ 
Sbjct: 458 SLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVG 517

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG-------QQIHGTTLKSGFYSAVI 368
            F  M+R  V+ D +TF+  L+A      ++ G       Q  HG   +   Y+ ++
Sbjct: 518 LFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMV 574


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 214/606 (35%), Positives = 321/606 (52%), Gaps = 55/606 (9%)

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
           ++++G++S+ ++       +SKM     ++ + FT     +AS++L       KQIH  A
Sbjct: 33  SVQNGYFSSALL------YFSKMRRE-NIKPNDFTFPCAFKASTALCLPFA-GKQIHAIA 84

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +K   + D FV  +  D+Y + G   EA+ LF+     ++A WNA I   +L     KA+
Sbjct: 85  LKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAI 144

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           + F      G   D IT    + AC     L  G+Q+H   ++SGFE D+ V++GI+D+Y
Sbjct: 145 DKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVY 204

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KC  +  A+ +FN +   + V+W TM++ C  N E++ A  ++   R  G+   ++  +
Sbjct: 205 GKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVS 264

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ A + ++ LE GR +HA  +K     D FVG +LVDMY KCG+IED   +F +M  R
Sbjct: 265 SVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPER 324

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N V WNAM+ G A  G+ +  + LFE+M++  V  + VT I VLSACS  G V    E F
Sbjct: 325 NLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIF 383

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
             MR++Y IEP  EHY+ + D LGRAG  + A E +  MP   + S+  ALL ACRV G+
Sbjct: 384 ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGE 443

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK--------- 828
            E GK  A+ L  L+P DS  +VLLSN+FAAA +WD+ T  R EMK   +K         
Sbjct: 444 PELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVT 503

Query: 829 ----------KDPADLIFAKVEGLIKRIKE----GGYVPDTDFVLLDVEEEEKERALYYH 874
                     KD +    ++++ ++ +++      GY+PDT++ L D+EEEEK   + YH
Sbjct: 504 AKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYH 563

Query: 875 SEKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDG 911
           SEK+A A+GLI+ PP   I   K                            NRFH  RD 
Sbjct: 564 SEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDS 623

Query: 912 MCPCAD 917
            C C D
Sbjct: 624 QCSCRD 629



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 155/335 (46%), Gaps = 4/335 (1%)

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           + TW A+I G + +     AL  FS M     + ++ T   A KA   L +   GKQ+HA
Sbjct: 23  VVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHA 82

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+K G   D  V     DMY K G   +AQ +F+++P  +   W   IS  V +G    
Sbjct: 83  IALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGK 142

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           A+  + + R  G  PD  TF   + A +    L+ GRQ+H  +I+     D  V   ++D
Sbjct: 143 AIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIID 202

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y KC  +E A ++F  M  RN+V W  M+    Q+   E+   +F   +  G+E     
Sbjct: 203 VYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYM 262

Query: 697 FIGVLSACSYTGLVS-EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
              V+SA  Y G+   E   + H +  K  +E ++   S LVD  G+ G  ++  ++   
Sbjct: 263 VSSVISA--YAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHE 320

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           MP E +     A++     QGD +    + E++ +
Sbjct: 321 MP-ERNLVSWNAMISGYAHQGDVDMAMTLFEEMQS 354



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 3/274 (1%)

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY K      AQ +    P    V WT +ISG V NG    AL  + +MR   + P++FT
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F    KAS+ L     G+QIHA  +KL   +D FVG S  DMY+K G   +A  LF +M 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            RN  +WNA +      G   + +  F + +  G EPD +TF   L+AC+    +    +
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
             H +  + G E +V   + ++D  G+  +  E  E++ +     ++     ++ AC  Q
Sbjct: 181 -LHGLVIRSGFEGDVSVANGIIDVYGKC-KEVELAEMVFNGMGRRNSVSWCTMVAACE-Q 237

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            D +    V   +   E  + + Y++ S I A A
Sbjct: 238 NDEKEKACVVFLMGRKEGIELTDYMVSSVISAYA 271



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 37/313 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA  L   QI D+F+  +   MYS+ G    A+RLFD+MP R++  WN+ ++    
Sbjct: 77  GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136

Query: 132 SGE-GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            G  G A +    FR      + ITF +       L  C  +  +     +HG  ++ G 
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCA------FLNACADARCLDLGRQLHGLVIRSGF 190

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  V+  ++++Y K  ++  A+ +F+GM  R+ V W  M+ A  +N   E+   +F+ 
Sbjct: 191 EGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLM 250

Query: 251 LHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN---------------- 293
             + G+   D  V  V+   + + G      V A A+K  +  +                
Sbjct: 251 GRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGS 310

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         N+V WN  +SGY   GD   A+  F  M +S    + VT +  L+A
Sbjct: 311 IEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEAVANYVTLICVLSA 369

Query: 342 VAGTDNLNLGQQI 354
            +    + LG +I
Sbjct: 370 CSRGGAVKLGNEI 382



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/321 (21%), Positives = 125/321 (38%), Gaps = 44/321 (13%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MYS+      A+ L    P R +++W ++++    +G       +     F  +R     
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNG-----YFSSALLYFSKMRRENIK 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            +  T     K   +    +A + +H  ALK+G + D+FV  +  ++YSK G   EA+ L
Sbjct: 56  PNDFTFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRL 115

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD----------------- 259
           FD M  R+V +W   +     +G   +    F++  R G  PD                 
Sbjct: 116 FDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCL 175

Query: 260 ---------------DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN--NNSNVVLWNK 302
                          +  V    G+I   GK  E ++       +++N     N V W  
Sbjct: 176 DLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAE-----MVFNGMGRRNSVSWCT 230

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            ++   Q  +   A   F+   +  ++         ++A AG   L  G+ +H   +K+ 
Sbjct: 231 MVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKAC 290

Query: 363 FYSAVIVGNSLINMYSKMGCV 383
               + VG++L++MY K G +
Sbjct: 291 VEGDIFVGSALVDMYGKCGSI 311



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG+  H  ++ S    D  + N ++ +Y +C  +  A  +F+ M  R+ +SW +++AA
Sbjct: 175 LDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAA 234

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              + E     V   F + R  +E I  T  +  + +      SG  +   +VH  A+K 
Sbjct: 235 CEQNDEKEKACVV--FLMGR--KEGIELTDYMVSSVISAYAGISGLEFG-RSVHALAVKA 289

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            +  D FV  ALV++Y K G I + + +F  M ER++V W  M+  YA  G  +    LF
Sbjct: 290 CVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLF 349

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLG 274
            ++    +  +  ++ CVL   S  G
Sbjct: 350 EEMQSEAV-ANYVTLICVLSACSRGG 374



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      S L  G+S HA  + +    D F+ + L+ MY +CGS+    ++F +MP+R
Sbjct: 265 SVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPER 324

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +L+SWN++++ YAH G+     V     LF  + +S    + +TL  +L  C   G V
Sbjct: 325 NLVSWNAMISGYAHQGD-----VDMAMTLFEEM-QSEAVANYVTLICVLSACSRGGAV 376


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 204/555 (36%), Positives = 315/555 (56%), Gaps = 48/555 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK       ++ T LI +Y +   + +A  + +     ++ +W AMI GY   
Sbjct: 30  QRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQR 89

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             + +AL LF  M  SG   +E T AT + +C      + G+Q+H+  +K+ FE  + V 
Sbjct: 90  GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG 149

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K G + +A+ +F+ +P  D V+ T +ISG    G ++ AL ++ +++  G+ 
Sbjct: 150 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 209

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  T+A ++ A S L AL+ GRQ+H+++++        +  SL+DMY+KCG++  +  +
Sbjct: 210 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F  M  R  + WNAMLVG ++HG G E ++LF+ MK    V+PDSVTF+ VLS CS+ G+
Sbjct: 270 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 329

Query: 710 VSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
                E F+ ++ +K G EPE+EHY  +VD  GRAGR +EA E I  MPFE +A++  +L
Sbjct: 330 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 389

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGACRV  +   G++VA +L+ +E  ++  YV+LSN++A+A +WDDV + R  MK K V 
Sbjct: 390 LGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 449

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                        + +FAKV  L  +IKE GYVP+   VL DV++E
Sbjct: 450 KEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDE 509

Query: 866 EKERALYYHSEKLARAYGLISTP---PSSVILSNK------------EPLYA-------- 902
           +KE+ L  HSEKLA A+GLI TP   P  +I + +              +Y         
Sbjct: 510 QKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDK 569

Query: 903 NRFHHLRDGMCPCAD 917
           NRFHH+  G C C D
Sbjct: 570 NRFHHIVGGTCSCGD 584



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 150/275 (54%), Gaps = 3/275 (1%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + +  C     +++G+++HA+ +K+ +E  + + + ++ +Y KC  + DA+ + +++P  
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + V+WT MISG    G    AL ++ +M +SG  P+EFTFA ++ + +  +  + GRQIH
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           + +IK    S  FVG SL+DMYAK G I +A  +F  +  R+ V   A++ G AQ G  E
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSF 735
           E L LF  ++  G+  + VT+  VL+A S    +    + + H++R K      +++   
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS-- 252

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           L+D   + G    +  +  SMP     S +  L+G
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 287



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 167/358 (46%), Gaps = 37/358 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   IS + +  G+  HA ++ +   P  +L   L+ +Y++C  L  ARR+ D+MP+R
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW ++++ Y+  G       +E   LF  +  S T  +  T A +L  C SS     
Sbjct: 75  NVVSWTAMISGYSQRG-----YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 129

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +K       FV  +L+++Y+K GKI EA+ +FDG+ ERDVV    ++  YA+
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------LLL 290
            G  EE   LF  L R G+  +  +   VL  +S L    H  QV ++ ++      ++L
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 249

Query: 291 YNN----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN- 327
            N+                         V+ WN  L GY + G    A+E F  M   N 
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309

Query: 328 VQYDSVTFLVALAAVA--GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           V+ DSVTFL  L+  +  G ++  L         K GF   +     +++++ + G V
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 367



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 174/392 (44%), Gaps = 53/392 (13%)

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------ 383
           YDSV     L        +  GQ++H   +K+ +   V +   LI +Y+K  C+      
Sbjct: 13  YDSV-----LTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRV 67

Query: 384 -------------------------------------CGLRTDQFTLASVLRASSSLPEG 406
                                                 G   ++FT A+VL + +S   G
Sbjct: 68  LDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS-SSG 126

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
             L +QIH   IK    +  FV ++L+D+Y + G + EA  +F+     D+ +  A+I G
Sbjct: 127 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 186

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y       +AL+LF  +   G R + +T A+ + A   L  L  G+Q+H++ +++     
Sbjct: 187 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 246

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           + + + ++DMY KCG++  ++ IF+ +P    ++W  M+ G   +G    A+ ++  M+ 
Sbjct: 247 VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE 306

Query: 587 SG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGN 643
              V PD  TF  ++   S     ++G +I   ++      +P +     +VD++ + G 
Sbjct: 307 ENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGR 366

Query: 644 IEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN 674
           +E+A+   K+M    T  +W ++L     H N
Sbjct: 367 VEEAFEFIKKMPFEPTAAIWGSLLGACRVHQN 398



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 50/321 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +SGY Q G    A+  FV M+ S    +  TF   L +   +    LG+QIH
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------- 384
              +K+ F S + VG+SL++MY+K G +C                               
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G+R++  T ASVL A S L   L   +Q+H H ++        +  +L
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLA-ALDHGRQVHSHVLRAKLPFYVVLQNSL 253

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           ID+Y + GS+  +  +F++     + +WNAM+ GY       +A+ELF  M    + + D
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAM---KSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            +T    +  C    M  +G ++  Y M   K GFE ++     ++D++ + G + +A  
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIF-YEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 372

Query: 549 IFNDIP-APDDVAWTTMISGC 568
               +P  P    W +++  C
Sbjct: 373 FIKKMPFEPTAAIWGSLLGAC 393


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 227/696 (32%), Positives = 342/696 (49%), Gaps = 92/696 (13%)

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           D   A+  FV M  +       TF   L   A   +L  G+ +H      G  S  +   
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 372 SLINMYSK--------------------------------------MGCVC------GLR 387
           +L NMY+K                                      M  V       G R
Sbjct: 99  ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D  TL SVL  + +    L   ++ H  AI++       V+TA++D YC+ G +  A  
Sbjct: 159 PDSITLVSVL-PACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+     +  +WNAMI GY  + +S +AL LF+ M   G  + ++++  A++ACG L  
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L +G ++H   ++ G + ++ V + ++ MY KC  +  A  +F+++     V+W  MI G
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           C  NG  + A+ ++ +M+L  V PD FT   ++ A + ++   Q R IH   I+L    D
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            +V  +L+DMYAKCG +  A ILF     R+ + WNAM+ G   HG G+  ++LFE+MK+
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G+ P+  TF+ VLSACS+ GLV E  E F  M+E YG+EP +EHY  +VD LGRAG+  
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLD 517

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA   I  MP +   S++ A+LGAC++  + E  +  A+K+  L P +   +VLL+NI+A
Sbjct: 518 EAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYA 577

Query: 808 AANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIK 844
            A+ W DV   R  M++  ++K P                       A  I++++  LI+
Sbjct: 578 NASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIE 637

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN- 903
            IK  GYVPDTD +  DVE++ K + L  HSEKLA A+GLI T P + I   K     N 
Sbjct: 638 EIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCND 696

Query: 904 ----------------------RFHHLRDGMCPCAD 917
                                 RFHH +DG C C D
Sbjct: 697 CHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGD 732



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 36/383 (9%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           +LP+   +L  F+  S   +      + S+L+   +  DL  G++ HA++       +  
Sbjct: 39  DLPA---ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEAL 95

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
               L  MY++C     ARR+FD+MP RD ++WN+++A YA +G   A    E   + R 
Sbjct: 96  AATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGL--ARMAME--MVVRM 151

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             E       +TL  +L  C ++  + A    H +A++ GL     V+ A+++ Y K G 
Sbjct: 152 QEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGD 211

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           IR A+ +FD M  ++ V W  M+  YA+NG   E   LF  +   G+   D SV   L  
Sbjct: 212 IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQA 271

Query: 270 ISDLG------KRHE--------EQVQAYAIKLLLYNNNSNV---------------VLW 300
             +LG      + HE          V      + +Y+    V               V W
Sbjct: 272 CGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSW 331

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  + G  Q G +  A+  F  M   NV+ DS T +  + A+A   +    + IHG +++
Sbjct: 332 NAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIR 391

Query: 361 SGFYSAVIVGNSLINMYSKMGCV 383
                 V V  +LI+MY+K G V
Sbjct: 392 LHLDQDVYVLTALIDMYAKCGRV 414



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 195/445 (43%), Gaps = 55/445 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY-DSVTFLVALAAVAGTDNLNLGQQIHG 356
           V WN  ++GY + G    A+E  V M     +  DS+T +  L A A    L   ++ H 
Sbjct: 126 VAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHA 185

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-----------------DQF-------- 391
             ++SG    V V  ++++ Y K G +   R                  D +        
Sbjct: 186 FAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245

Query: 392 ---------------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALID 434
                          T  SVL A  +  E   L + + VH +      DS VS   ALI 
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALIT 305

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y +   +  A ++F+  D     +WNAMI G   +  S  A+ LF+ M     + D  T
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT 365

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           + + + A   +    Q + +H Y+++   + D+ V + ++DMY KCG +  A+ +FN   
Sbjct: 366 LVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSAR 425

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               + W  MI G   +G    A+ ++ +M+  G+VP+E TF  ++ A S    +++GR+
Sbjct: 426 ERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485

Query: 615 IHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGL 669
              ++ K D   +P  G+    ++VD+  + G +++A+   ++M M   + ++ AML   
Sbjct: 486 YFTSM-KEDYGLEP--GMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC 542

Query: 670 AQHGN----GEETLKLFEDMKAHGV 690
             H N     E   K+FE     GV
Sbjct: 543 KLHKNVELAEESAQKIFELGPQEGV 567



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 35/299 (11%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++  Y +CG +  AR +FD MP ++ +SWN+++  YA +G+       E   LF  + E 
Sbjct: 202 ILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR-----EALALFNRMVEE 256

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               + +++   L+ C   G +     VH   ++IGL  +  V  AL+ +YSK  ++  A
Sbjct: 257 GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLA 316

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             +FD +  R  V W  M+   A+NG  E+   LF  +    + PD  ++  V+  ++D+
Sbjct: 317 SHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADI 376

Query: 274 GKRHEEQ-VQAYAIKL--------------------------LLYNN--NSNVVLWNKKL 304
               + + +  Y+I+L                          +L+N+    +V+ WN  +
Sbjct: 377 SDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI 436

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
            GY   G    A+E F  M    +  +  TFL  L+A +    ++ G++ + T++K  +
Sbjct: 437 HGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE-YFTSMKEDY 494



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N L+TMYS+C  +  A  +FD++  R  +SWN+++   A +G        +  RLF  
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSE-----DAVRLFTR 353

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++         TL  ++           +  +HGY++++ L  D +V  AL+++Y+K G+
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           +  A+ LF+  +ER V+ W  M+  Y  +GFG+    LF ++   G+ P++ +   VL  
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473

Query: 270 ISDLG 274
            S  G
Sbjct: 474 CSHAG 478



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      SD L  +  H   +      D ++   L+ MY++CG +  AR LF+   +R
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
            +I+WN+++  Y   G G A        LF  ++      +  T   +L  C  +G V  
Sbjct: 428 HVITWNAMIHGYGSHGFGKA-----AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDE 482

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
              + +     Y L+ G+  + +  G +V++  + GK+ EA
Sbjct: 483 GREYFTSMKEDYGLEPGM--EHY--GTMVDLLGRAGKLDEA 519


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 227/696 (32%), Positives = 342/696 (49%), Gaps = 92/696 (13%)

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           D   A+  FV M  +       TF   L   A   +L  G+ +H      G  S  +   
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 372 SLINMYSK--------------------------------------MGCVC------GLR 387
           +L NMY+K                                      M  V       G R
Sbjct: 99  ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D  TL SVL  + +    L   ++ H  AI++       V+TA++D YC+ G +  A  
Sbjct: 159 PDSITLVSVL-PACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+     +  +WNAMI GY  + +S +AL LF+ M   G  + ++++  A++ACG L  
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L +G ++H   ++ G + ++ V + ++ MY KC  +  A  +F+++     V+W  MI G
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           C  NG  + A+ ++ +M+L  V PD FT   ++ A + ++   Q R IH   I+L    D
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            +V  +L+DMYAKCG +  A ILF     R+ + WNAM+ G   HG G+  ++LFE+MK+
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G+ P+  TF+ VLSACS+ GLV E  E F  M+E YG+EP +EHY  +VD LGRAG+  
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLD 517

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA   I  MP +   S++ A+LGAC++  + E  +  A+K+  L P +   +VLL+NI+A
Sbjct: 518 EAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYA 577

Query: 808 AANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIK 844
            A+ W DV   R  M++  ++K P                       A  I++++  LI+
Sbjct: 578 NASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIE 637

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN- 903
            IK  GYVPDTD +  DVE++ K + L  HSEKLA A+GLI T P + I   K     N 
Sbjct: 638 EIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCND 696

Query: 904 ----------------------RFHHLRDGMCPCAD 917
                                 RFHH +DG C C D
Sbjct: 697 CHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGD 732



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 36/383 (9%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           +LP+   +L  F+  S   +      + S+L+   +  DL  G++ HA++       +  
Sbjct: 39  DLPA---ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEAL 95

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
               L  MY++C     ARR+FD+MP RD ++WN+++A YA +G   A    E   + R 
Sbjct: 96  AATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGL--ARMAME--MVVRM 151

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             E       +TL  +L  C ++  + A    H +A++ GL     V+ A+++ Y K G 
Sbjct: 152 QEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGD 211

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           IR A+ +FD M  ++ V W  M+  YA+NG   E   LF  +   G+   D SV   L  
Sbjct: 212 IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQA 271

Query: 270 ISDLG------KRHE--------EQVQAYAIKLLLYNNNSNV---------------VLW 300
             +LG      + HE          V      + +Y+    V               V W
Sbjct: 272 CGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSW 331

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  + G  Q G +  A+  F  M   NV+ DS T +  + A+A   +    + IHG +++
Sbjct: 332 NAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIR 391

Query: 361 SGFYSAVIVGNSLINMYSKMGCV 383
                 V V  +LI+MY+K G V
Sbjct: 392 LHLDQDVYVLTALIDMYAKCGRV 414



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 195/445 (43%), Gaps = 55/445 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY-DSVTFLVALAAVAGTDNLNLGQQIHG 356
           V WN  ++GY + G    A+E  V M     +  DS+T +  L A A    L   ++ H 
Sbjct: 126 VAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHA 185

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-----------------DQF-------- 391
             ++SG    V V  ++++ Y K G +   R                  D +        
Sbjct: 186 FAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245

Query: 392 ---------------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALID 434
                          T  SVL A  +  E   L + + VH +      DS VS   ALI 
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALIT 305

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y +   +  A ++F+  D     +WNAMI G   +  S  A+ LF+ M     + D  T
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT 365

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           + + + A   +    Q + +H Y+++   + D+ V + ++DMY KCG +  A+ +FN   
Sbjct: 366 LVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSAR 425

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               + W  MI G   +G    A+ ++ +M+  G+VP+E TF  ++ A S    +++GR+
Sbjct: 426 ERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485

Query: 615 IHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGL 669
              ++ K D   +P  G+    ++VD+  + G +++A+   ++M M   + ++ AML   
Sbjct: 486 YFTSM-KEDYGLEP--GMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC 542

Query: 670 AQHGN----GEETLKLFEDMKAHGV 690
             H N     E   K+FE     GV
Sbjct: 543 KLHKNVELAEESAQKIFELGPQEGV 567



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 35/299 (11%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++  Y +CG +  AR +FD MP ++ +SWN+++  YA +G+       E   LF  + E 
Sbjct: 202 ILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR-----EALALFNRMVEE 256

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               + +++   L+ C   G +     VH   ++IGL  +  V  AL+ +YSK  ++  A
Sbjct: 257 GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLA 316

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             +FD +  R  V W  M+   A+NG  E+   LF  +    + PD  ++  V+  ++D+
Sbjct: 317 SHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADI 376

Query: 274 GKRHEEQ-VQAYAIKL--------------------------LLYNN--NSNVVLWNKKL 304
               + + +  Y+I+L                          +L+N+    +V+ WN  +
Sbjct: 377 SDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI 436

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
            GY   G    A+E F  M    +  +  TFL  L+A +    ++ G++ + T++K  +
Sbjct: 437 HGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE-YFTSMKEDY 494



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N L+TMYS+C  +  A  +FD++  R  +SWN+++   A +G        +  RLF  
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSE-----DAVRLFTR 353

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++         TL  ++           +  +HGY++++ L  D +V  AL+++Y+K G+
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           +  A+ LF+  +ER V+ W  M+  Y  +GFG+    LF ++   G+ P++ +   VL  
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473

Query: 270 ISDLG 274
            S  G
Sbjct: 474 CSHAG 478



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      SD L  +  H   +      D ++   L+ MY++CG +  AR LF+   +R
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
            +I+WN+++  Y   G G A        LF  ++      +  T   +L  C  +G V  
Sbjct: 428 HVITWNAMIHGYGSHGFGKA-----AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDE 482

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
              + +     Y L+ G+  + +  G +V++  + GK+ EA
Sbjct: 483 GREYFTSMKEDYGLEPGM--EHY--GTMVDLLGRAGKLDEA 519


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 204/555 (36%), Positives = 315/555 (56%), Gaps = 48/555 (8%)

Query: 411  KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            +++H H IK       ++ T LI +Y +   + +A  + +     ++ +W AMI GY   
Sbjct: 497  QRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQR 556

Query: 471  NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
              + +AL LF  M  SG   +E T AT + +C      + G+Q+H+  +K+ FE  + V 
Sbjct: 557  GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG 616

Query: 531  SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            S +LDMY K G + +A+ +F+ +P  D V+ T +ISG    G ++ AL ++ +++  G+ 
Sbjct: 617  SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 676

Query: 591  PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
             +  T+A ++ A S L AL+ GRQ+H+++++        +  SL+DMY+KCG++  +  +
Sbjct: 677  SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 736

Query: 651  FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
            F  M  R  + WNAMLVG ++HG G E ++LF+ MK    V+PDSVTF+ VLS CS+ G+
Sbjct: 737  FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 796

Query: 710  VSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
                 E F+ ++ +K G EPE+EHY  +VD  GRAGR +EA E I  MPFE +A++  +L
Sbjct: 797  EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 856

Query: 769  LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
            LGACRV  +   G++VA +L+ +E  ++  YV+LSN++A+A +WDDV + R  MK K V 
Sbjct: 857  LGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 916

Query: 829  KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
            K+P                        + +FAKV  L  +IKE GYVP+   VL DV++E
Sbjct: 917  KEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDE 976

Query: 866  EKERALYYHSEKLARAYGLISTP---PSSVILSNK------------EPLYA-------- 902
            +KE+ L  HSEKLA A+GLI TP   P  +I + +              +Y         
Sbjct: 977  QKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDK 1036

Query: 903  NRFHHLRDGMCPCAD 917
            NRFHH+  G C C D
Sbjct: 1037 NRFHHIVGGTCSCGD 1051



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 150/275 (54%), Gaps = 3/275 (1%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + +  C     +++G+++HA+ +K+ +E  + + + ++ +Y KC  + DA+ + +++P  
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + V+WT MISG    G    AL ++ +M +SG  P+EFTFA ++ + +  +  + GRQIH
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           + +IK    S  FVG SL+DMYAK G I +A  +F  +  R+ V   A++ G AQ G  E
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSF 735
           E L LF  ++  G+  + VT+  VL+A S    +    + + H++R K      +++   
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS-- 719

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           L+D   + G    +  +  SMP     S +  L+G
Sbjct: 720 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 754



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 167/358 (46%), Gaps = 37/358 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   IS + +  G+  HA ++ +   P  +L   L+ +Y++C  L  ARR+ D+MP+R
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW ++++ Y+  G       +E   LF  +  S T  +  T A +L  C SS     
Sbjct: 542 NVVSWTAMISGYSQRGYA-----SEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 596

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +K       FV  +L+++Y+K GKI EA+ +FDG+ ERDVV    ++  YA+
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------LLL 290
            G  EE   LF  L R G+  +  +   VL  +S L    H  QV ++ ++      ++L
Sbjct: 657 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 716

Query: 291 YNN----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN- 327
            N+                         V+ WN  L GY + G    A+E F  M   N 
Sbjct: 717 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 776

Query: 328 VQYDSVTFLVALAAVA--GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           V+ DSVTFL  L+  +  G ++  L         K GF   +     +++++ + G V
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 834



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 163/322 (50%), Gaps = 7/322 (2%)

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           T + SG YS     +  ++++ +M  + G   ++FT A+VL + +S   G  L +QIH  
Sbjct: 547 TAMISG-YSQRGYASEALHLFVEM-LMSGTAPNEFTFATVLTSCTS-SSGFQLGRQIHSL 603

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            IK    +  FV ++L+D+Y + G + EA  +F+     D+ +  A+I GY       +A
Sbjct: 604 VIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEA 663

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           L+LF  +   G R + +T A+ + A   L  L  G+Q+H++ +++     + + + ++DM
Sbjct: 664 LDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM 723

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-VVPDEFT 595
           Y KCG++  ++ IF+ +P    ++W  M+ G   +G    A+ ++  M+    V PD  T
Sbjct: 724 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 783

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQ 653
           F  ++   S     ++G +I   ++      +P +     +VD++ + G +E+A+   K+
Sbjct: 784 FLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 843

Query: 654 MDMRNT-VLWNAMLVGLAQHGN 674
           M    T  +W ++L     H N
Sbjct: 844 MPFEPTAAIWGSLLGACRVHQN 865



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 50/321 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +SGY Q G    A+  FV M+ S    +  TF   L +   +    LG+QIH
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------- 384
              +K+ F S + VG+SL++MY+K G +C                               
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G+R++  T ASVL A S L   L   +Q+H H ++        +  +L
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLA-ALDHGRQVHSHVLRAKLPFYVVLQNSL 720

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           ID+Y + GS+  +  +F++     + +WNAM+ GY       +A+ELF  M    + + D
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAM---KSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            +T    +  C    M  +G ++  Y M   K GFE ++     ++D++ + G + +A  
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIF-YEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 839

Query: 549 IFNDIP-APDDVAWTTMISGC 568
               +P  P    W +++  C
Sbjct: 840 FIKKMPFEPTAAIWGSLLGAC 860


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/546 (37%), Positives = 302/546 (55%), Gaps = 48/546 (8%)

Query: 413 IHVHAIKNDTVADSFV-STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           +H H + +  + +  V    ++++Y + G + +A  +F+     D+ TW A+I G+  +N
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               AL LF  M   G + +  T+++ +KA G    L  G Q+HA+ +K G++  + V S
Sbjct: 169 RPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY +CG M  AQ  F+ +P   +V+W  +ISG    GE + AL +  +M+     P
Sbjct: 229 ALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQP 288

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
             FT++ ++ A + + ALEQG+ +HA++IK       F+G +L+DMYAK G+I+DA  +F
Sbjct: 289 THFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVF 348

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            ++   + V WN ML G AQHG G+ETL  FE M   G+EP+ ++F+ VL+ACS++GL+ 
Sbjct: 349 DRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLD 408

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E    F LM+ KY +EP+V HY   VD LGR G    A   I  MP E +A++  ALLGA
Sbjct: 409 EGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGA 467

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR+  + E G + AE+   L+P DS   +LLSNI+A+A +W DV   R  MK   VKK P
Sbjct: 468 CRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQP 527

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
           A                         I  K E +  +IKE GYVPDT  VLL V+++E+E
Sbjct: 528 ACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQERE 587

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
             L YHSEKLA A+ L++TP  S I                     + ++E +    NRF
Sbjct: 588 EKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRF 647

Query: 906 HHLRDG 911
           H  RDG
Sbjct: 648 HRFRDG 653



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 179/387 (46%), Gaps = 48/387 (12%)

Query: 351 GQQIHGTTLKSGFY-SAVIVGNSLINMYSKMGCV-------------------------- 383
           G+ +H   + S F  + +++ N ++NMY+K GC+                          
Sbjct: 106 GRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFS 165

Query: 384 -----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                             G + + FTL+S+L+AS S   GL    Q+H   +K    +  
Sbjct: 166 QNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS-EHGLDPGTQLHAFCLKYGYQSSV 224

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V +AL+D+Y R G M  A+  F+        +WNA+I G+        AL L   M   
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
             +    T ++ + AC  +  L+QGK +HA+ +KSG +L   + + +LDMY K G++ DA
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +F+ +  PD V+W TM++GC  +G     L  + QM   G+ P+E +F  ++ A S  
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHS 404

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAM 665
             L++G      + K     D    ++ VD+  + G ++ A    ++M +  T  +W A+
Sbjct: 405 GLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEP 692
           L     H N E  L ++   +A  ++P
Sbjct: 465 LGACRMHKNME--LGVYAAERAFELDP 489



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 144/254 (56%), Gaps = 6/254 (2%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELD--LCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           +K C  L  ++QG+ +HA+ + S F LD  L + + I++MY KCG + DA+ +F+++P  
Sbjct: 94  LKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V WT +I+G   N     AL ++ QM   G  P+ FT + L+KAS     L+ G Q+H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  +K    S  +VG +LVDMYA+CG+++ A + F  M  ++ V WNA++ G A+ G GE
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSF 735
             L L   M+    +P   T+  VLSAC+  G + +  + + H++  K G++      + 
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI--KSGLKLIAFIGNT 330

Query: 736 LVDALGRAGRTKEA 749
           L+D   +AG   +A
Sbjct: 331 LLDMYAKAGSIDDA 344



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 144/316 (45%), Gaps = 40/316 (12%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLM------TMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           LGK    RI+++  +   FL N+L+       MY++CG L  ARR+FD+MP +D+++W +
Sbjct: 100 LGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTA 159

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++A ++ +         +   LF  +       +  TL+ LLK   S   +     +H +
Sbjct: 160 LIAGFSQNNRPR-----DALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAF 214

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            LK G     +V  ALV++Y++ G +  A+  FDGM  +  V W  ++  +A  G GE  
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAI----KLLLYNNNS---- 295
            HL   + R    P   +   VL   + +G   + + V A+ I    KL+ +  N+    
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334

Query: 296 --------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                               +VV WN  L+G  Q G     ++ F  M+R  ++ + ++F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394

Query: 336 LVALAAVAGTDNLNLG 351
           L  L A + +  L+ G
Sbjct: 395 LCVLTACSHSGLLDEG 410



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 122/250 (48%), Gaps = 17/250 (6%)

Query: 30  NLPSFSLSLLPFL-----QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQ 84
           N P  +L L P +     Q +HF+ SS       +L+ + S   L  G   HA  L    
Sbjct: 168 NRPRDALLLFPQMLRLGFQPNHFTLSS-------LLKASGSEHGLDPGTQLHAFCLKYGY 220

Query: 85  IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
               ++ + L+ MY+RCG +  A+  FD MP +  +SWN++++ +A  GEG         
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE-----HAL 275

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            L   ++      +  T + +L  C S G +   + VH + +K GL    F+   L+++Y
Sbjct: 276 HLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMY 335

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G I +AK +FD + + DVV W  ML   A++G G+E    F  + R G+ P++ S  
Sbjct: 336 AKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFL 395

Query: 265 CVLGVISDLG 274
           CVL   S  G
Sbjct: 396 CVLTACSHSG 405



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/455 (20%), Positives = 167/455 (36%), Gaps = 98/455 (21%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFV-SGALVNIYSKFGKIREAKFLFDGMQER 223
           LLK C   G V     VH + +    + +  V    +VN+Y+K G + +A+ +FD M  +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI-SDLGKRHEEQVQ 282
           D+V W  ++  +++N    +   LF  + R G  P+  ++  +L    S+ G     Q+ 
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 283 AYAIKLLLYNNNSNV-------------------------------VLWNKKLSGYLQVG 311
           A+ +K   Y   S+V                               V WN  +SG+ + G
Sbjct: 213 AFCLK---YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           +   A+     M R N Q    T+   L+A A    L  G+ +H   +KSG      +GN
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           +L++MY+K G +                          +K++    +K D V+       
Sbjct: 330 TLLDMYAKAGSIDD------------------------AKRVFDRLVKPDVVS------- 358

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
                                       WN M+ G        + L+ F  M   G   +
Sbjct: 359 ----------------------------WNTMLTGCAQHGLGKETLDRFEQMLRIGIEPN 390

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           EI+    + AC    +L +G        K   E D+      +D+  + G +  A+    
Sbjct: 391 EISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIR 450

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           ++P  P    W  ++  C     +++ L +Y   R
Sbjct: 451 EMPIEPTAAVWGALLGAC--RMHKNMELGVYAAER 483



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDA 647
           +VPD   ++ L+K  + L  +EQGR +HA+L+      +  V  + +V+MYAKCG ++DA
Sbjct: 83  LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SY 706
             +F +M  ++ V W A++ G +Q+    + L LF  M   G +P+  T   +L A  S 
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSE 202

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            GL  +     H    KYG +  V   S LVD   R G    A      MP ++  S + 
Sbjct: 203 HGL--DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNA 260

Query: 767 ALLGACRVQGDTE 779
            + G  R +G+ E
Sbjct: 261 LISGHAR-KGEGE 272


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 233/706 (33%), Positives = 350/706 (49%), Gaps = 55/706 (7%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKI----REAKFLFDGMQERDVVLWKVMLRA 234
           E +H +ALK G      VS +L+  YS F ++      A F       RDV  W  +L  
Sbjct: 32  EALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNP 91

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
            + +     + H    L  S + P   S        +         V  +A+   L + +
Sbjct: 92  LSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAV-VHALACKLPSAS 150

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           SNV +    L+ Y ++G    A   F  M   N     V++    A VAG          
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRN----EVSWA---AMVAG---------- 193

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                    Y+A         ++ +M   C L  ++F   +VL A S +P GL +  Q+H
Sbjct: 194 ---------YAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAIS-VPLGLPMGVQVH 243

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K+  V    V  +L+ +Y + G M  A ++FE+    +  TW+AMI GY  + N+ 
Sbjct: 244 GLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAE 303

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            A+ +FS MH +G    E T+   + AC  +  L +GKQ H   +K GFE+ + V S ++
Sbjct: 304 SAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALV 363

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY KCG + DA+  FN     D V WT M++G V NGE + AL +Y +M   GV P+  
Sbjct: 364 DMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTL 423

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T   L++A + L ALE G+Q+H  ++K        VG +L  MY+KCGN+ED  ++F++M
Sbjct: 424 TITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRM 483

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             R+ + WN+++ G +Q+G G + + LFE+MK  G  PD VTFI VL ACS+ GLV   +
Sbjct: 484 PHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGW 543

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             F  M + YG+ P ++HY+ +VD L RAG   EA + I S+  +    + R +LGACR 
Sbjct: 544 TYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRS 603

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
             D + G +  EKLM L   DS+AY+LLSNI+AA  +W+DV   R  MK   V KDP   
Sbjct: 604 LRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCS 663

Query: 832 --------------------ADLIFAKVEGLIKRIKEGGYVPDTDF 857
                               A++I  ++  L K +K+ GY P + +
Sbjct: 664 WVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMKDEGYNPASKY 709



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 239/605 (39%), Gaps = 95/605 (15%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           F+   S +Q+   LR A    D   G++ HA  L S       ++N+L+T YS    L  
Sbjct: 9   FTGQVSHTQFIEHLRRASRPRD---GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFL 65

Query: 107 --ARRLFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT-FTSRLT 161
             A  +F  +P   RD+ SWNS+L   +H               FRS+  S T   S  +
Sbjct: 66  PAAFAVFADIPAAARDVASWNSLLNPLSH------HRPLAALSHFRSMLSSSTILPSPHS 119

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            A        +    A   VH  A K+     + FVS AL+N+Y K G I +A+ +FD M
Sbjct: 120 FAAAFTAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEM 179

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP---DDESVQCVLGVIS-DLGKR 276
             R+ V W  M+  YA     +E F LF  +   G CP   ++     VL  IS  LG  
Sbjct: 180 PHRNEVSWAAMVAGYAARKCSQEAFELFRQM--LGECPLHKNEFVATAVLSAISVPLGLP 237

Query: 277 HEEQVQAYAIK-------------LLLY---------------NNNSNVVLWNKKLSGYL 308
              QV    +K             + +Y               +   N + W+  ++GY 
Sbjct: 238 MGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYS 297

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G+   A+  F  M  +       T +  L A +    L  G+Q HG  +K GF   V 
Sbjct: 298 QNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVY 357

Query: 369 VGNSLINMYSKMGCV-----C--------------------------------------G 385
           V ++L++MY+K GC+     C                                      G
Sbjct: 358 VKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEG 417

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +  +  T+ S+LRA + L   L   KQ+H   +K      + V +AL  +Y + G++ + 
Sbjct: 418 VFPNTLTITSLLRACAGL-AALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDG 476

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F      D+  WN++I G+  +   + A+ LF  M   G   D +T    + AC  +
Sbjct: 477 MVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHM 536

Query: 506 LMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTT 563
            ++ +G       +K  G    L   + ++D+  + G + +A+     I        W  
Sbjct: 537 GLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRI 596

Query: 564 MISGC 568
           ++  C
Sbjct: 597 VLGAC 601



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 7/183 (3%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV--DAQSIFNDIPAP--DDVAWTTM 564
           + G+ +HA+A+KSG      VS+ ++  Y     +    A ++F DIPA   D  +W ++
Sbjct: 29  RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88

Query: 565 ISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL- 622
           ++  + +     ALS +  M   S ++P   +FA    A++   +   G  +HA   KL 
Sbjct: 89  LNP-LSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLP 147

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             SS+ FV  +L++MY K G I DA ++F +M  RN V W AM+ G A     +E  +LF
Sbjct: 148 SASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELF 207

Query: 683 EDM 685
             M
Sbjct: 208 RQM 210


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 208/565 (36%), Positives = 300/565 (53%), Gaps = 55/565 (9%)

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           + EG  +  ++ +      T+A +     L+ +Y + G + EA  +F       + +W+A
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQN----GLVSMYAKCGCLDEARAIFNGILERTVVSWSA 56

Query: 463 MIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           MI  Y L     +AL LF  M   G    + +T      ACG +  L+QG+++HA AM S
Sbjct: 57  MIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMAS 116

Query: 522 GFEL---DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           G EL   +  + + +L+MYV+CG++ +A+ +F+ +  PD  +WT+MI+ C +N E   AL
Sbjct: 117 G-ELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEAL 175

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
            ++H+M L G+ P   T A ++ A +C  AL+ G+QIH+ L      S      +L+DMY
Sbjct: 176 ELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMY 235

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG++E +  +F  M+ RN+V W AM+  LAQHG G+E L+LF++M   G+  D+ TFI
Sbjct: 236 AKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFI 295

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VL ACS+ GL+ E+ E FH M E Y I P   HY   +D +GRAGR ++A ELI SMPF
Sbjct: 296 CVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPF 355

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
                  + LL ACR+    E    VAE L  L P DS AY LL N++AA  ++ D    
Sbjct: 356 HPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRV 415

Query: 819 RGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDT 855
           R  M  + +KK P                        D I  ++E L  R++E GYVP+T
Sbjct: 416 RKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNT 475

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-------------- 901
             VL  V EEEKE+ +  HSEKLA A+GLI+TPP + +L  K                  
Sbjct: 476 KDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKI 535

Query: 902 ---------ANRFHHLRDGMCPCAD 917
                     +RFHH  DG C C D
Sbjct: 536 MRRRIVVRDTHRFHHFEDGQCSCKD 560



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 9/210 (4%)

Query: 68  DLLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           DL  G+  HA  + S ++   +  L N L+ MY RCGSL  AR++FD M   D  SW S+
Sbjct: 102 DLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSM 161

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           + A   + E     + E   LF  +  E I  TS +TLA +L  C  SG +   + +H  
Sbjct: 162 ITACTENCE-----LLEALELFHRMNLEGIPPTS-VTLASVLNACACSGALKVGKQIHSR 215

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
               G         AL+++Y+K G +  +  +F  M+ R+ V W  M+ A A++G G+E 
Sbjct: 216 LDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEA 275

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             LF +++  G+  D  +  CVL   S  G
Sbjct: 276 LELFKEMNLEGMVADATTFICVLRACSHAG 305



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 175/435 (40%), Gaps = 109/435 (25%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-P 258
           LV++Y+K G + EA+ +F+G+ ER VV W  M+ AYA +G G+E   LF  +   G   P
Sbjct: 26  LVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEP 85

Query: 259 DDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD--- 312
           +  +   V    GVI DL +  E    A A   L    +SN +L N  L+ Y++ G    
Sbjct: 86  NAMTFTGVFNACGVIEDLEQGREIHALAMASGEL---KSSNAILENALLNMYVRCGSLEE 142

Query: 313 --------NHG--------------------AIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                   +H                     A+E F  M    +   SVT    L A A 
Sbjct: 143 ARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACAC 202

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
           +  L +G+QIH     SGF+S+V+   +L++MY+K G               L  SS + 
Sbjct: 203 SGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG--------------SLECSSKVF 248

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             +                 +S   TA+I    ++G   EA                   
Sbjct: 249 TAME--------------TRNSVSWTAMIAALAQHGQGDEA------------------- 275

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAM 519
                       LELF  M+  G   D  T    ++AC    ++K+  +     +  YA+
Sbjct: 276 ------------LELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAI 323

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLAL 578
            +  E   C +   LD   + G + DA+ + + +P  P+ + W T+++ C  + + + A 
Sbjct: 324 -APTETHYCRA---LDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERAT 379

Query: 579 SIYHQMRLSGVVPDE 593
            +     LS + P++
Sbjct: 380 KVAEL--LSKLAPED 392



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 37/304 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H+R+            N L++MY++CG L  AR +F+ + +R ++SW++++ AYA 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 132 SGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            G G      E   LF  +R +     + +T   +   C     +     +H  A+  G 
Sbjct: 64  HGRGQ-----EALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGE 118

Query: 191 VW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           +   +  +  AL+N+Y + G + EA+ +FD M   D   W  M+ A  EN    E   LF
Sbjct: 119 LKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELF 178

Query: 249 VDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI----------------- 286
             ++  G+ P   ++  VL   +      +GK+   ++ A                    
Sbjct: 179 HRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKC 238

Query: 287 -------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                  K+       N V W   ++   Q G    A+E F  M    +  D+ TF+  L
Sbjct: 239 GSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVL 298

Query: 340 AAVA 343
            A +
Sbjct: 299 RACS 302


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 250/848 (29%), Positives = 389/848 (45%), Gaps = 176/848 (20%)

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D D++ WN  ++AY   G+           +F  +R   T T    ++  L    ++ + 
Sbjct: 57  DSDIVKWNRKISAYMRKGQ-----CESALSVFNGMRRRSTVTYNAMISGYLS---NNKFD 108

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            A +       +  + W+  +SG     Y K G +  A+ LF+ M E+DVV W  ML  +
Sbjct: 109 CARKVFEKMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
           A+NGF EE   +F                                      ++L+ N   
Sbjct: 164 AQNGFVEEARKIFD-------------------------------------QMLVKNE-- 184

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
             + WN  LS Y+Q    +G IE    +  S + ++ V++   +        L+  + + 
Sbjct: 185 --ISWNGLLSAYVQ----NGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF 238

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                       I  N +I  Y++ G           L+   R    LP           
Sbjct: 239 DRMP----VRDKISWNIMITGYAQNGL----------LSEARRLFEELP----------- 273

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                  + D F  TA++  + +NG + EA  +FE     +  +WNAMI GY+ S    K
Sbjct: 274 -------IRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A ELF  M +                                        +    + ++ 
Sbjct: 327 ARELFDQMPSR---------------------------------------NTSSWNTMVT 347

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            Y +CG +  A+ +F+++P  D ++W  MISG   +G+ + AL ++ +M+  G + +   
Sbjct: 348 GYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A  + + + + ALE G+Q+H  L+K    +    G +L+ MY KCG+IE+A+ +F+ + 
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT 467

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V WN M+ G A+HG G+E L LFE MK   ++PD VT +GVLSACS+TG V +  E
Sbjct: 468 EKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGME 526

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F+ M + YGI    +HY+ ++D LGRAGR  EA  L+ SMPF   A+   ALLGA R+ 
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---- 831
           GDTE G+  AEK+  +EP +S  YVLLSN++AA+ +W +V   R +M+ K VKK P    
Sbjct: 587 GDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSW 646

Query: 832 -------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                              A+ I+A +E L   +K+ G+V  T  VL DVEEEEKE  L 
Sbjct: 647 VEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLK 706

Query: 873 YHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLR 909
           YHSEKLA A+G++S PP   I                     ++ ++ +   +NRFHH  
Sbjct: 707 YHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFS 766

Query: 910 DGMCPCAD 917
           +G C C D
Sbjct: 767 EGSCSCGD 774



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 226/507 (44%), Gaps = 43/507 (8%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++PDR L   N +++ Y + G+L  AR LF++MP++D++SWN++L+ +A +G      V 
Sbjct: 116 KMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG-----FVE 170

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV-WDEFVSGAL 200
           E  ++F    + +   + ++   LL   + +G +  +  +    +   +V W+  + G  
Sbjct: 171 EARKIF----DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG-- 224

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
              Y +  ++ +A+ LFD M  RD + W +M+  YA+NG   E   LF +L         
Sbjct: 225 ---YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL--------- 272

Query: 261 ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
             ++ V    + +    +  +   A ++       N V WN  ++GY+Q      A E F
Sbjct: 273 -PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGT--------DNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             M   N    S   +V   A  G         D +     I    + SG Y+       
Sbjct: 332 DQMPSRNTS--SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISG-YAQSGQSEE 388

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
            ++++ KM    G+  ++  LA  L + + +   L L KQ+H   +K           AL
Sbjct: 389 ALHLFIKMKRDGGI-LNRSALACALSSCAEIA-ALELGKQLHGRLVKAGFQTGYIAGNAL 446

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           + +Y + GS+ EA  +FE+    D+ +WN MI GY       +AL LF  M  +  + D+
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDD 505

Query: 493 ITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T+   + AC     + +G +  ++     G   +    + ++D+  + G + +A ++  
Sbjct: 506 VTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMK 565

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLA 577
            +P  PD   W  ++     +G+ +L 
Sbjct: 566 SMPFYPDAATWGALLGASRIHGDTELG 592



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 155/376 (41%), Gaps = 98/376 (26%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE----------------- 134
           N +++ Y        AR++F+KMPDRDLISWN +L+ Y  +G                  
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154

Query: 135 -------GNAEN--VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
                  G A+N  V E  ++F    + +   + ++   LL   + +G +  +  +    
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIF----DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSK 210

Query: 186 LKIGLV-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           +   +V W+  + G     Y +  ++ +A+ LFD M  RD + W +M+  YA+NG   E 
Sbjct: 211 MDWEIVSWNCLMGG-----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA 265

Query: 245 FHLFVDL----------HRSGLCPD---DESVQCVLGVISDLGKRHE------------- 278
             LF +L            SG   +   DE+ +    +  ++ +++E             
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATR----IFEEMPEKNEVSWNAMIAGYVQS 321

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD-------------------------- 312
           +Q++  A +L     + N   WN  ++GY Q G+                          
Sbjct: 322 QQIEK-ARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGY 380

Query: 313 -----NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
                +  A+  F+ M R     +      AL++ A    L LG+Q+HG  +K+GF +  
Sbjct: 381 AQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGY 440

Query: 368 IVGNSLINMYSKMGCV 383
           I GN+L+ MY K G +
Sbjct: 441 IAGNALLAMYGKCGSI 456



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 185/444 (41%), Gaps = 107/444 (24%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL--RHAISTSDLLLGKSTHARIL 80
           F K   R+L S+++ L  +++  + S++ +    F+ +  +  +S + +L G + +  + 
Sbjct: 114 FEKMPDRDLISWNVMLSGYVKNGNLSAARAL---FNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 81  NSSQIPDRFLTNN------LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            + +I D+ L  N      L++ Y + G +  ARRLFD   D +++SWN ++  Y     
Sbjct: 171 EARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230

Query: 135 ------------------------GNAEN--VTEGFRLFRSL--RESITFTSRLT----- 161
                                   G A+N  ++E  RLF  L  R+   +T+ ++     
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290

Query: 162 --LAPLLKL-------------CLSSGYVWASETVHGYAL------KIGLVWDEFVSGAL 200
             L    ++              + +GYV + +      L      +    W+  V+G  
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-- 348

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
              Y++ G I +AK LFD M +RD + W  M+  YA++G  EE  HLF+ + R G   + 
Sbjct: 349 ---YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNR 405

Query: 261 ESVQCVLGVIS-----DLGKR-HEEQVQA-----------------------YAIKLLLY 291
            ++ C L   +     +LGK+ H   V+A                        A  +   
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED 465

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------G 344
               ++V WN  ++GY + G    A+  F +M +  ++ D VT +  L+A +       G
Sbjct: 466 ITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKG 524

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVI 368
            +  N   Q +G T  +  Y+ +I
Sbjct: 525 MEYFNSMYQNYGITANAKHYTCMI 548



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 16/204 (7%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H R++ +         N L+ MY +CGS+  A  +F+ + ++D++SWN+++A 
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALK 187
           YA  G G      E   LF S++ +I     +TL  +L  C  +G+V    E  +     
Sbjct: 481 YARHGFGK-----EALALFESMKMTIK-PDDVTLVGVLSACSHTGFVDKGMEYFNSMYQN 534

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEE 243
            G+  +      ++++  + G++ EA  L   M    D   W  +L   R + +   GE+
Sbjct: 535 YGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEK 594

Query: 244 VFHLFVDLHRSGLCPDDESVQCVL 267
                 ++      PD+  +  +L
Sbjct: 595 AAEKVFEME-----PDNSGMYVLL 613


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 226/713 (31%), Positives = 349/713 (48%), Gaps = 92/713 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N   W+  +  Y+Q      A+E +  M+R  +  D+ T    LAA     ++  G+ + 
Sbjct: 32  NAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQ 91

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
               + GF   V+V  SLI++++K GC+                                
Sbjct: 92  RKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKN 151

Query: 384 ------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        GL  D FT A++L A SS P+ L   K IH H +++    +  V  A
Sbjct: 152 DLALDTYWKMRSQGLEPDAFTYAAILGACSS-PDFLLDGKHIHKHILESKHFGNISVRNA 210

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI +Y + GS+ +++ LF   D  D+ +WNAMI  Y L  +   A  LF  M T G   D
Sbjct: 211 LITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPD 270

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             T ++ + AC     L+ G+ +H      GF+ D  + + ++ M+ +CG++  A+  F 
Sbjct: 271 IYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFY 330

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            I   +  AW TM++      +   AL +Y  M L G  PD FTF+ +V + + L AL +
Sbjct: 331 SIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 390

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+ IH          D  +G +LV+MYAKCG++ DA   F  +  ++ V W+AM+   AQ
Sbjct: 391 GKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQ 450

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG+ EE L+L   M   G+  + VT   VL ACS+ G + E  + F  + + +GIE + E
Sbjct: 451 HGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEE 510

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           +    +D LGRAG  KEA  ++ +MPF+ S      LLG C+V GD   GK + ++++AL
Sbjct: 511 NTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVAL 570

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK---------------------- 829
           EP +  +YVLL+N++AAA +WDDV   R  M++K VK+                      
Sbjct: 571 EPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTS 630

Query: 830 DPADL-IFAKVEGLIKRIK-EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
           +P +L I A++E L  R+K E GYVPDT  V  DV +++KE  L +HSEK+A  +GLI++
Sbjct: 631 NPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITS 690

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           PP S +                     ++ +  +     RFHH   G+C C D
Sbjct: 691 PPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGD 743



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 195/387 (50%), Gaps = 4/387 (1%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D+F++  +I +Y +  S  +A  +F+     +  +W+ ++  Y+ +    +ALE++  M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
                +D  T+++ + AC  LL +++G+ +   A + GFE D+ V++ ++ ++ KCG + 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 545 DAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
           +A+S+F  + A  D ++ T MI   V +G+ DLAL  Y +MR  G+ PD FT+A ++ A 
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           S    L  G+ IH ++++     +  V  +L+ MYAKCG+++D+  LF  MD+++ V WN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           AM+     +G+ ++   LF  M   G  PD  TF  +L AC+    + +     H+    
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDG-RMLHVRITA 299

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
            G + +    + L+    R G  + A     S+  +   + +  L  A   Q D      
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTML--AAYAQFDKGKDAL 357

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAAN 810
              K M LE F    +   S + + A+
Sbjct: 358 FLYKNMLLEGFTPDRFTFSSVVDSCAS 384



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 235/563 (41%), Gaps = 83/563 (14%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D FL N ++ MY +C S   AR++FD++  R+  SW+ ++  Y  +         E   +
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNA-----MYQEALEV 55

Query: 147 FRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           ++ + R+ I+  +  TL+ +L  C     V     V   A ++G   D  V+ +L+++++
Sbjct: 56  YKEMVRKEISIDA-YTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFA 114

Query: 206 KFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           K G + EA+ +F  M   RD++    M+ AY  +G  +     +  +   GL PD  +  
Sbjct: 115 KCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYA 174

Query: 265 CVLGVISD----LGKRHEEQ-----------------VQAYA--------IKLLLYNNNS 295
            +LG  S     L  +H  +                 +  YA          L L  +  
Sbjct: 175 AILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVK 234

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV WN  ++ Y   G +  A   F  M       D  TF   L A A    L  G+ +H
Sbjct: 235 DVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLH 294

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGC--------------------------------- 382
                 GF     + N+LI+M+++ G                                  
Sbjct: 295 VRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGK 354

Query: 383 ----------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                     + G   D+FT +SV+ + +SL   L   K IH  +       D  + TAL
Sbjct: 355 DALFLYKNMLLEGFTPDRFTFSSVVDSCASLG-ALREGKFIHECSTSCGFEKDVILGTAL 413

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +++Y + GS+A+A+  F+     D+ +W+AMI       ++ +ALEL   M+  G   +E
Sbjct: 414 VNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNE 473

Query: 493 ITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T ++ + AC     L +G       +   G E D   + G +D+  + G + +A+ + +
Sbjct: 474 VTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLH 533

Query: 552 DIPAPDD-VAWTTMISGCVDNGE 573
            +P     VA  T++ GC  +G+
Sbjct: 534 TMPFKVSFVALVTLLGGCKVHGD 556



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 5/221 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    S   L  G+  H RI       D  + NNL++M++RCGSL  ARR F  +  +
Sbjct: 276 SILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKK 335

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L +WN++LAAYA   +G      +   L++++        R T + ++  C S G +  
Sbjct: 336 ELGAWNTMLAAYAQFDKGK-----DALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 390

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  +   G   D  +  ALVN+Y+K G + +AK  FDG+  +DVV W  M+ A A+
Sbjct: 391 GKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQ 450

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +G  EE   L   ++  G+  ++ +   VL   S  G+ +E
Sbjct: 451 HGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYE 491



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 6/217 (2%)

Query: 63  AISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           A S+ D LL GK  H  IL S    +  + N L+TMY++CGSL  ++ LF  M  +D++S
Sbjct: 179 ACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           WN+++AAY   G        + F LF  +          T + +L  C S   +     +
Sbjct: 239 WNAMIAAYTLYGHDK-----DAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRML 293

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H      G   D  +   L++++++ G +  A+  F  ++++++  W  ML AYA+   G
Sbjct: 294 HVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKG 353

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           ++   L+ ++   G  PD  +   V+   + LG   E
Sbjct: 354 KDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 390


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 233/712 (32%), Positives = 363/712 (50%), Gaps = 90/712 (12%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECF-VNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
            N +V  WN  +SGY + G++   I CF + M+ S +  D  TF   L A     +   G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 169

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK------------------MG---------CVC 384
            +IH   LK GF   V V  SLI++YS+                  MG         C  
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSK-----------QIHVHAIKNDTVADSFVSTALI 433
           G   +  TL++ LRA  S+     LS             IH ++IK+   ++ FVS  LI
Sbjct: 230 GNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D+Y   G + + + +F+     DL +WN++I  Y L+    +A+ LF  M  S  + D +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFND 552
           T+ +       L  ++  + +  + ++ G+ L D+ + + ++ MY K G +  A+++FN 
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQ 611
           +P  D ++W T+ISG   NG    A+ +Y+ M   G +  ++ T+  ++ A S   AL Q
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G ++H  L+K     D FV  SL DMY KCG +EDA  LF Q+   N+V WN ++     
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG+GE+ + LF++M   GV+PD +TF+ +LSACS++GLV E    F +M+  YGI P ++
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY  +VD  GRAG+ + A + I SM  +  AS+  ALL ACRV G+ + GK  +E L  +
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
           EP     +VLLSN++A+A +W+ V   R     K ++K P                    
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709

Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
               + ++ ++  L  ++K  GYVPD  FVL DVE++EKE  L  HSE+LA A+ LI+TP
Sbjct: 710 HPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATP 769

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
             + I                     ++ +E +   +NRFHH ++G+C C D
Sbjct: 770 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGD 821



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 244/587 (41%), Gaps = 88/587 (14%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           ++L   K  HAR++ S QI +  ++  L+ +Y   G++  AR  FD + +RD+ +WN ++
Sbjct: 65  TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           + Y  +  GN+  V   F LF  L   +T   R T   +LK C +   V     +H  AL
Sbjct: 125 SGYGRA--GNSSEVIRCFSLFM-LSSGLTPDYR-TFPSVLKACRT---VIDGNKIHCLAL 177

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K G +WD +V+ +L+++YS++  +  A+ LFD M  RD+  W  M+  Y ++G  +E   
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIK-----LLLYNNN------ 294
           L   L       D  +V  +L   ++ G  +    + +Y+IK      L  +N       
Sbjct: 238 LSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293

Query: 295 -----------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                             +++ WN  +  Y        AI  F  M  S +Q D +T + 
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMGCVCGLR--------- 387
             + ++   ++   + + G TL+ G F   + +GN+++ MY+K+G V   R         
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413

Query: 388 -----------------------------------TDQFTLASVLRASSSLPEGLHLSKQ 412
                                               +Q T  SVL A S     L    +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ-AGALRQGMK 472

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H   +KN    D FV T+L D+Y + G + +A  LF      +   WN +I  +    +
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSS 531
             KA+ LF  M   G + D IT  T + AC    ++ +G+          G    L    
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            ++DMY + G +  A      +   PD   W  ++S C  +G  DL 
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 159/303 (52%), Gaps = 8/303 (2%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L  +K +H   + +  + +  +S  L+++YC  G++A A + F++    D+  WN MI G
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126

Query: 467 YILSNNSHKALELFS-HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           Y  + NS + +  FS  M +SG   D  T  + +KAC  ++    G ++H  A+K GF  
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMW 183

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D+ V++ ++ +Y +  A+ +A+ +F+++P  D  +W  MISG   +G    AL++ + +R
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
                 D  T   L+ A +      +G  IH+  IK    S+ FV   L+D+YA+ G + 
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           D   +F +M +R+ + WN+++     +      + LF++M+   ++PD +T I + S  S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359

Query: 706 YTG 708
             G
Sbjct: 360 QLG 362



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 36/326 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       D   G + H+  +      + F++N L+ +Y+  G L   +++FD+M  R
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DLISWNSI+ AY  +     E       LF+ +R S      LTL  L  +    G + A
Sbjct: 312 DLISWNSIIKAYELN-----EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366

Query: 178 SETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             +V G+ L+ G   ++   G A+V +Y+K G +  A+ +F+ +   DV+ W  ++  YA
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426

Query: 237 ENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN- 293
           +NGF  E   ++  +   G +  +  +   VL   S  G  R   ++    +K  LY + 
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                        N V WN  ++ +   G    A+  F  M+  
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQ 352
            V+ D +TF+  L+A + +  ++ GQ
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQ 572



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 13/195 (6%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +++   W S+L        L  G   H R+L +    D F+  +L  MY +CG L  A  
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           LF ++P  + + WN+++A +   G G      +   LF+ + +       +T   LL  C
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGE-----KAVMLFKEMLDEGVKPDHITFVTLLSAC 562

Query: 170 LSSGYV----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERD 224
             SG V    W  E +       G+       G +V++Y + G++  A KF+     + D
Sbjct: 563 SHSGLVDEGQWCFEMMQ---TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619

Query: 225 VVLWKVMLRAYAENG 239
             +W  +L A   +G
Sbjct: 620 ASIWGALLSACRVHG 634



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 5/168 (2%)

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           T L+  + +HA L+      +  +   LV++Y   GN+  A   F  +  R+   WN M+
Sbjct: 65  TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124

Query: 667 VGLAQHGNGEETLKLFE-DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
            G  + GN  E ++ F   M + G+ PD  TF  VL AC     V +     H +  K+G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDG-NKIHCLALKFG 180

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
              +V   + L+    R      A  L   MP     S +  + G C+
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 239/722 (33%), Positives = 374/722 (51%), Gaps = 103/722 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV W+  ++ Y   G    AI+ FV  +   +  +   +   + A + +D + +G+   
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189

Query: 356 GTTLKSG-FYSAVIVGNSLINMYSK--------------------------------MG- 381
           G  +K+G F S V VG SLI+M+ K                                MG 
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249

Query: 382 -----------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                       + G  +D+FTL+SV  A + L E L L KQ+H  AI++  V D  V  
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAEL-ENLSLGKQLHSWAIRSGLVDD--VEC 306

Query: 431 ALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-SHKALELFSHMHTS 486
           +L+D+Y +   +GS+ +   +F+  +   + +W A+I GY+ + N + +A+ LFS M T 
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366

Query: 487 GE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
           G    +  T ++A KACG L   + GKQ+   A K G   +  V++ ++ M+VK   M D
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           AQ  F  +   + V++ T + G   N   + A  +  ++    +    FTFA L+   + 
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           + ++ +G QIH+ ++KL  S +  V  +L+ MY+KCG+I+ A  +F  M+ RN + W +M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G A+HG     L+ F  M   GV+P+ VT++ +LSACS+ GLVSE + +F+ M E + 
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I+P++EHY+ +VD L RAG   +A E I +MPF+A   + R  LGACRV  +TE GK  A
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD--------------- 830
            K++ L+P + +AY+ LSNI+A A +W++ T  R +MK +N+ K+               
Sbjct: 667 RKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKF 726

Query: 831 --------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV----EEEEKERALYYHSEKL 878
                    A  I+ +++ LI  IK  GYVPDTD VL  +    +E EKER LY HSEK+
Sbjct: 727 YVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKI 786

Query: 879 ARAYGLISTPPSSVI---------------------LSNKEPLYA--NRFHHLRDGMCPC 915
           A A+GLIST  S  +                     +S +E +    NRFHH +DG C C
Sbjct: 787 AVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSC 846

Query: 916 AD 917
            D
Sbjct: 847 ND 848



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 154/658 (23%), Positives = 287/658 (43%), Gaps = 90/658 (13%)

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           R+ I     +T + LLK C+ +      + VH   ++  +  D  +  +L+++YSK G  
Sbjct: 54  RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113

Query: 211 REAKFLFDGMQ---ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD------- 260
            +A+ +F+ M+   +RDVV W  M+  Y  NG   +   +FV+    GL P+D       
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173

Query: 261 -------------------------ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
                                    ES  CV   + D+  + E   +  A K+    +  
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN-AYKVFDKMSEL 232

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   ++  +Q+G    AI  F++M+ S  + D  T     +A A  +NL+LG+Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292

Query: 356 GTTLKSGF--------------------------------------YSAVIVG------- 370
              ++SG                                       ++A+I G       
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352

Query: 371 -NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
               IN++S+M     +  + FT +S  +A  +L +   + KQ+   A K    ++S V+
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP-RVGKQVLGQAFKRGLASNSSVA 411

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            ++I ++ ++  M +A+  FE+    +L ++N  + G   + N  +A +L S +      
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +   T A+ +     +  +++G+Q+H+  +K G   +  V + ++ MY KCG++  A  +
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           FN +   + ++WT+MI+G   +G     L  ++QM   GV P+E T+  ++ A S +  +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591

Query: 610 EQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAML 666
            +G + H N +  D    P +     +VD+  + G + DA+     M  +  VL W   L
Sbjct: 592 SEGWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650

Query: 667 VGLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
                H N E   L   + ++    EP +   +  + AC+  G   E+ E    M+E+
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRRKMKER 706



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 164/739 (22%), Positives = 297/739 (40%), Gaps = 148/739 (20%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP-- 115
           S+L+  I   D  LGK  HAR++     PD  L N+L+++YS+ G    A  +F+ M   
Sbjct: 67  SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126

Query: 116 -DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             RD++SW++++A Y ++G        +  ++F    E     +      +++ C +S +
Sbjct: 127 GKRDVVSWSAMMACYGNNGRE-----LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181

Query: 175 VWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKF-LFDGMQERDVVLWKVML 232
           V       G+ +K G    D  V  +L++++ K     E  + +FD M E +VV W +M+
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLY 291
               + GF  E    F+D+  SG   D  ++  V    ++L      +Q+ ++AI+  L 
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301

Query: 292 NN-----------------------------NSNVVLWNKKLSGYLQVGD-NHGAIECFV 321
           ++                             + +V+ W   ++GY++  +    AI  F 
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361

Query: 322 NMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            MI + +V+ +  TF  A  A     +  +G+Q+ G   K G  S   V NS+I+M+ K 
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421

Query: 381 --------------------------GCVCGLRTDQ-----------------FTLASVL 397
                                     G    L  +Q                 FT AS+L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
              +++   +   +QIH   +K     +  V  ALI +Y + GS+  A  +F   +  ++
Sbjct: 482 SGVANVG-SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----K 512
            +W +MI G+     + + LE F+ M   G + +E+T    + AC  + ++ +G      
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDN 571
               + +K   E   C    ++D+  + G + DA    N +P   DV  W T +  C  +
Sbjct: 601 MYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              +L                                   G+     +++LD  ++P   
Sbjct: 657 SNTEL-----------------------------------GKLAARKILELD-PNEPAAY 680

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-----W-------NAMLVGLAQHGNG---- 675
           I L ++YA  G  E++  + ++M  RN V      W       +   VG   H N     
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740

Query: 676 EETLKLFEDMKAHGVEPDS 694
           +E  +L  ++K  G  PD+
Sbjct: 741 DELDRLITEIKRCGYVPDT 759



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 19/402 (4%)

Query: 385 GLRT-DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           G+R  D  T +S+L+ S        L K +H   I+ D   DS +  +LI +Y ++G  A
Sbjct: 56  GIRPMDSVTFSSLLK-SCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114

Query: 444 EAEYLFENKDGF---DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           +AE +FE    F   D+ +W+AM+  Y  +     A+++F      G   ++      ++
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174

Query: 501 ACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKC-GAMVDAQSIFNDIPAPDD 558
           AC     +  G+    + MK+G FE D+CV   ++DM+VK   +  +A  +F+ +   + 
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V WT MI+ C+  G    A+  +  M LSG   D+FT + +  A + L  L  G+Q+H+ 
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294

Query: 619 LIKLDCSSDPFVGISLVDMYAKC---GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN- 674
            I+     D  V  SLVDMYAKC   G+++D   +F +M+  + + W A++ G  ++ N 
Sbjct: 295 AIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352

Query: 675 GEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE--KYGIEPEVE 731
             E + LF +M   G VEP+  TF     AC   G +S+      ++ +  K G+     
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
             + ++    ++ R ++A     S+  +   S +  L G CR
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 463 MIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           +I  ++ + +   A+     M   G R +D +T ++ +K+C      + GK +HA  ++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP---APDDVAWTTMISGCVDNGEEDLAL 578
             E D  + + ++ +Y K G    A+ +F  +      D V+W+ M++   +NG E  A+
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDM 637
            ++ +    G+VP+++ +  +++A S    +  GR     L+K     SD  VG SL+DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 638 YAKCGN-IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           + K  N  E+AY +F +M   N V W  M+    Q G   E ++ F DM   G E D  T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 697 FIGVLSACS 705
              V SAC+
Sbjct: 272 LSSVFSACA 280



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 114/233 (48%), Gaps = 12/233 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HF+ SS+        +   + SD  +GK    +        +  + N++++M+ + 
Sbjct: 369 VEPNHFTFSSA-------FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
             +  A+R F+ + +++L+S+N+ L      G     N  + F+L   + E     S  T
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFL-----DGTCRNLNFEQAFKLLSEITERELGVSAFT 476

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    + G +   E +H   +K+GL  ++ V  AL+++YSK G I  A  +F+ M+
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            R+V+ W  M+  +A++GF   V   F  +   G+ P++ +   +L   S +G
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 113/502 (22%), Positives = 204/502 (40%), Gaps = 62/502 (12%)

Query: 307 YLQVGDNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           +L  GD  GA+     M R  ++  DSVTF   L +     +  LG+ +H   ++     
Sbjct: 36  HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP 95

Query: 366 AVIVGNSLINMYSKMGCVCGLR-----TDQFTLASVLRASSSLP----EGLHLSK-QIHV 415
             ++ NSLI++YSK G             +F    V+  S+ +      G  L   ++ V
Sbjct: 96  DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155

Query: 416 HAIKNDTVADSFVSTALIDVYCRNG---SMAEAEYLFENKDGF---DLATWNAMIFGYIL 469
             ++   V + +  TA+I   C N     +      F  K G    D+    ++I  ++ 
Sbjct: 156 EFLELGLVPNDYCYTAVIRA-CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 470 SNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-- 526
             NS   A ++F  M      L+ +T    +  C  +   ++  +     + SGFE D  
Sbjct: 215 GENSFENAYKVFDKM----SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 527 -----------------------LCVSSG--------ILDMYVKC---GAMVDAQSIFND 552
                                    + SG        ++DMY KC   G++ D + +F+ 
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDR 330

Query: 553 IPAPDDVAWTTMISGCVDNGE-EDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALE 610
           +     ++WT +I+G + N      A++++ +M   G V P+ FTF+   KA   L+   
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G+Q+     K   +S+  V  S++ M+ K   +EDA   F+ +  +N V +N  L G  
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           ++ N E+  KL  ++    +   + TF  +LS  +  G + +  E  H    K G+    
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQ 509

Query: 731 EHYSFLVDALGRAGRTKEAGEL 752
              + L+    + G    A  +
Sbjct: 510 PVCNALISMYSKCGSIDTASRV 531



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 12/247 (4%)

Query: 577 ALSIYHQMRLSGVVP-DEFTFAILVKASSCLTA--LEQGRQIHANLIKLDCSSDPFVGIS 633
           A+S    M   G+ P D  TF+ L+K  SC+ A     G+ +HA LI+ D   D  +  S
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLK--SCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102

Query: 634 LVDMYAKCGN---IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           L+ +Y+K G+    ED +   ++   R+ V W+AM+     +G   + +K+F +    G+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            P+   +  V+ ACS +  V         + +    E +V     L+D   +   + E  
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 751 ELILSMPFEASASMHRALLGACRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
             +     E +      ++  C   G   E  ++  +  M L  F+S  +  LS++F+A 
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD--MVLSGFESDKFT-LSSVFSAC 279

Query: 810 NQWDDVT 816
            + ++++
Sbjct: 280 AELENLS 286


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 230/743 (30%), Positives = 359/743 (48%), Gaps = 78/743 (10%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A  L+ C +S  +   + +H   L+ G   D F+  +L+N+Y K G++ +A+ +FDGM  
Sbjct: 64  AAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPH 123

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG---VISDLGKRHEE 279
           RDVV W  M+ A    G       LF ++   G+ P+  ++   L    V SDLG     
Sbjct: 124 RDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLG--FTP 181

Query: 280 QVQAYAIKL----------------------------LLYNNNSNVVLWNKKLSGYLQVG 311
           QV A A+KL                            LL +   + V WN  L+ Y + G
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           D    +  F  ++ S  +    T    L           GQ +HG  +K G  +  ++ N
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNN 301

Query: 372 SLINMYSK-------------------------MGCV------------------CGLRT 388
            LI MYSK                         + C                    G++ 
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +Q+T   +   +S   + ++L + IH H +K+       V  A++ +Y + G++ +A   
Sbjct: 362 NQYTFVGLAIVASRTGD-VNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILA 420

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+   G D+A+WN ++ G+   NN    L +F  +   G   ++ T    ++ C  L+ L
Sbjct: 421 FDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDL 480

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + G Q+HA  +KSGF+ D  VS  +LDMYV+ G   +A+ +F+ +   D  +WT ++S  
Sbjct: 481 RFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTY 540

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
               E + A+  +  M      P++ T A  +   S L  L  G Q+H+  IK   +S  
Sbjct: 541 AKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSS- 599

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +LVDMY KCGN+ DA +LF + D  + V WN ++ G AQHG+G + L+ F++M   
Sbjct: 600 VVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDE 659

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G  PD +TF+GVLSACS+ GL+ E    F L+   YGI P +EHY+ +VD L +AG+  E
Sbjct: 660 GNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAE 719

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A  LI  MP    AS+ + +LGACR+ G+ E  +  AEKL   +P D S+ +LLSNI+A 
Sbjct: 720 AESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYAD 779

Query: 809 ANQWDDVTSARGEMKRKNVKKDP 831
             +W+DV   R  +  + VKK+P
Sbjct: 780 LKRWNDVAKLRSMLVDRGVKKEP 802



 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 208/727 (28%), Positives = 331/727 (45%), Gaps = 95/727 (13%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + + L+   ++  L  GK+ HAR+L S   PD FL ++L+ MY +CG L  AR +FD MP
Sbjct: 63  YAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMP 122

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            RD+++W ++++A   +G+  A       RLF  + E     +   LA  LK C     +
Sbjct: 123 HRDVVAWTAMVSAITAAGDAGA-----ALRLFAEMSEEGVVPNGFALAAALKACTVGSDL 177

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
             +  VH  A+K+  ++D +VS +LV  Y   G++  A+        R  V W  +L  Y
Sbjct: 178 GFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEY 237

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYN-- 292
           A +G   +V  +F  L  SG      ++  VL    +LG  +  + V    IK  L    
Sbjct: 238 ARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDR 297

Query: 293 --NNSNVVLWNKKLSG--------------------YLQVGDNHG----AIECFVNMIRS 326
             NN  + +++K LS                      +   D H     A + F+ M   
Sbjct: 298 VLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDM 357

Query: 327 NVQYDSVTFLVALAAVAG-TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---- 381
            V+ +  TF V LA VA  T ++NL + IH   +KSGF     V ++++ MY K G    
Sbjct: 358 GVKPNQYTF-VGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQD 416

Query: 382 ----------------------------CVCGLR-----------TDQFTLASVLRASSS 402
                                       C  GLR            +++T   +LR  +S
Sbjct: 417 AILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTS 476

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L + L    Q+H   +K+    D  VS  L+D+Y + G    A  +F+     D+ +W  
Sbjct: 477 LMD-LRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTV 535

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           ++  Y  ++   KA+E F  M    +R ++ T+AT++  C  L  L  G Q+H+Y +KSG
Sbjct: 536 VMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSG 595

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           +   + VSS ++DMYVKCG + DA+ +F++    D V W T+I G   +G    AL  + 
Sbjct: 596 WNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQ 654

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAK 640
           +M   G VPDE TF  ++ A S    L++GR+ +  L+       P +     +VD+ AK
Sbjct: 655 EMIDEGNVPDEITFVGVLSACSHAGLLDEGRR-YFKLLSSVYGITPTLEHYACMVDILAK 713

Query: 641 CGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE----ETLKLFEDMKAHGVEPDSV 695
            G + +A  L  +M +  +  LW  +L     HGN E       KLFE       +PD +
Sbjct: 714 AGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFES------QPDDI 767

Query: 696 TFIGVLS 702
           +   +LS
Sbjct: 768 SSCILLS 774



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 160/326 (49%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           LR ++    +      +    L   K +H   +++    D+F+  +L+++YC+ G +A+A
Sbjct: 55  LRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADA 114

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     D+  W AM+     + ++  AL LF+ M   G   +   +A A+KAC   
Sbjct: 115 RSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVG 174

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L    Q+HA A+K     D  VSS +++ YV CG +  A+    D P   DV+W  ++
Sbjct: 175 SDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALL 234

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +    +G+    + ++ ++  SG    ++T   ++K    L   + G+ +H  +IK    
Sbjct: 235 NEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLE 294

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +D  +   L++MY+KC + EDAY +F ++D  + V  + M+    +H    E   +F  M
Sbjct: 295 TDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQM 354

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVS 711
              GV+P+  TF+G+    S TG V+
Sbjct: 355 SDMGVKPNQYTFVGLAIVASRTGDVN 380



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 17/325 (5%)

Query: 489 RLDEI-TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           R +E+ + A A++ C     L++GK +HA  ++SG   D  +   +L+MY KCG + DA+
Sbjct: 56  RAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADAR 115

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           S+F+ +P  D VAWT M+S     G+   AL ++ +M   GVVP+ F  A  +KA +  +
Sbjct: 116 SVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGS 175

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            L    Q+HA  +KL+   DP+V  SLV+ Y  CG ++ A        +R+ V WNA+L 
Sbjct: 176 DLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLN 235

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             A+ G+  + + +F+ +   G E    T   VL  C   GL +++ +  H +  K G+E
Sbjct: 236 EYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGL-AKSGQAVHGLVIKRGLE 294

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
            +    + L++   +    ++A E+   +  +    +H +L+ +C  + D          
Sbjct: 295 TDRVLNNCLIEMYSKCLSAEDAYEVFARI--DEPDVVHCSLMISCFDRHD---------- 342

Query: 788 LMALEPFDSSAYVLLSNIFAAANQW 812
            MA E FD   ++ +S++    NQ+
Sbjct: 343 -MAPEAFD--IFMQMSDMGVKPNQY 364



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 152/341 (44%), Gaps = 33/341 (9%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F+Q S      +   +  +   A  T D+ L +S HA I+ S     + + + ++ MY +
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVK 410

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            G++  A   FD M   D+ SWN++L+ + +SG     N   G R+F+ L       ++ 
Sbjct: 411 TGAVQDAILAFDLMQGPDIASWNTLLSGF-YSGN----NCEHGLRIFKELICEGVLANKY 465

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L+ C S   +     VH   LK G   D  VS  L+++Y + G    A+ +FD +
Sbjct: 466 TYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRL 525

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE- 279
           +ERDV  W V++  YA+   GE+    F  + R    P+D ++   L V SDL       
Sbjct: 526 KERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGL 585

Query: 280 QVQAYAIK---------------------------LLLYNNNSNVVLWNKKLSGYLQVGD 312
           Q+ +Y IK                           L   ++  ++V WN  + GY Q G 
Sbjct: 586 QLHSYTIKSGWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGH 645

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            + A+E F  MI      D +TF+  L+A +    L+ G++
Sbjct: 646 GYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRR 686


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 261/910 (28%), Positives = 427/910 (46%), Gaps = 136/910 (14%)

Query: 138 ENVTEGFRLFRSLRESITFTS---RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
           +N+T    L +S  ++  F S   +  +  LL+ C +   +     +H +        ++
Sbjct: 19  DNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRND 78

Query: 195 FV-SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL-H 252
           +V +  L+ +Y+  G   +++ +FD M+ ++++ W  ++  Y  NG   +V  +F+DL  
Sbjct: 79  YVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVS 138

Query: 253 RSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLL------------------- 290
            +   PD+ +   V+   G I D+  R  E +    IK+ L                   
Sbjct: 139 DTDFQPDNFTFPSVIKACGGILDV--RLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGA 196

Query: 291 ---------YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALA 340
                    +   +N+V WN  +  + + G +  + +  + M+    +  D VT +  L 
Sbjct: 197 VDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILP 256

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG-LRTDQF-------- 391
             AG   +++G  IHG  +K G    V+V N+++ MYSK    CG L   Q         
Sbjct: 257 VCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSK----CGYLNEAQMSFVKNNNK 312

Query: 392 ------TLASVLRASSSLPEGLHLSKQIHVHA--IKNDTV-------------------- 423
                 T+ S       + E  +L +++ +    +K + V                    
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372

Query: 424 --ADSF--------VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
               SF        +S A I  Y + G++  AE +F       +++WNA+I G+  + + 
Sbjct: 373 LHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDP 432

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KAL L   M  SG++ D  TI++ + AC  L  L+ GK++H Y +++G E D  V + +
Sbjct: 433 RKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSL 492

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           L  Y+ CG    A+ +F+ +   + V+W  MISG   NG    +L+++ +    G+   E
Sbjct: 493 LSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHE 552

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
                +  A S L+AL  G++ H  ++K   + D FVG S++DMYAK G I+++  +F  
Sbjct: 553 IAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDG 612

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           +  +N   WNA++V    HG+G+E ++L+E MK  G  PD  T+IG+L AC + GLV E 
Sbjct: 613 LKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEG 672

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F  M+    IEP++EHY+ L+D L RAGR  +A  L+  MP EA   +  +LL +CR
Sbjct: 673 LKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCR 732

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
             G  E G+ VA+KL+ LEP  +  YVLLSN++A   +WD V   R  MK   ++KD   
Sbjct: 733 TFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGC 792

Query: 832 -----ADLIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                   +++ V G                L +RI E GY P+T  VL +V EEEK   
Sbjct: 793 SWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDI 852

Query: 871 LYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA------------NRFHH 907
           L  HSEKLA ++GL+ T   + +             N   L +             RFHH
Sbjct: 853 LRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHH 912

Query: 908 LRDGMCPCAD 917
            RDG+C C D
Sbjct: 913 FRDGLCSCCD 922



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 198/749 (26%), Positives = 330/749 (44%), Gaps = 95/749 (12%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN-LMTMYSRC 101
           Q + F S  +      +L+   +  D+  G+  H  + +S+   + ++ N  L+ MY+ C
Sbjct: 33  QNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMC 92

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SRL 160
           GS + +R +FD M  ++LI WN++++ Y  +G        +  ++F  L     F     
Sbjct: 93  GSPLDSRLVFDNMETKNLIQWNALVSGYTRNGL-----YGDVVKVFMDLVSDTDFQPDNF 147

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   ++K C     V   E +HG  +K+GLV D FV  ALV +Y K G + EA  +FD M
Sbjct: 148 TFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFM 207

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVD-LHRSGLCPDDESVQCVL------------ 267
            E ++V W  M+ A++ENGF  + F L ++ L   GL PD  +V  +L            
Sbjct: 208 PETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIG 267

Query: 268 ----GVISDLGKRHEEQVQAYAIKL-------------LLYNNNSNVVLWNKKLSGYLQV 310
               G+   LG   E  V    + +              + NNN NVV WN  +S +   
Sbjct: 268 MGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLE 327

Query: 311 GDNHGAIECFVNM--IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           GD + A      M      ++ + VT L  L A      L   +++HG + +  F   V 
Sbjct: 328 GDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVE 386

Query: 369 VGNSLINMYSKMGCV-------------------------------------------CG 385
           + N+ I  Y+K G +                                            G
Sbjct: 387 LSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSG 446

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + D FT++S+L A + L + L   K+IH + ++N    D FV T+L+  Y   G  + A
Sbjct: 447 QQPDWFTISSLLLACAHL-KSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             LF+     +L +WNAMI GY  +   +++L LF    + G +  EI I +   AC  L
Sbjct: 506 RVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQL 565

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+ GK+ H Y +K+    D  V   I+DMY K G + +++ +F+ +   +  +W  +I
Sbjct: 566 SALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAII 625

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
                +G    A+ +Y +M+  G +PD FT+  ++ A      +E+G +    +   +  
Sbjct: 626 VAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLI 685

Query: 626 SDPFVGIS-LVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGN---GEETLK 680
                  + L+DM A+ G ++DA  L  +M +  +  +W+++L      G    GE+  K
Sbjct: 686 EPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAK 745

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
                K   +EPD      +LS   Y GL
Sbjct: 746 -----KLLELEPDKAENYVLLSNL-YAGL 768



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 190/381 (49%), Gaps = 26/381 (6%)

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           Q +  +FL  +AA+  TDNL                +A+I    LI  +S+      L+ 
Sbjct: 2   QTNRPSFLQEIAALCETDNLT---------------TALI----LIQSHSQNAAFISLQA 42

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV-STALIDVYCRNGSMAEAEY 447
            +  +  +L+A  +  + +   +++H     +    + +V +T LI +Y   GS  ++  
Sbjct: 43  KE-AIGLLLQACGNQKD-IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRL 100

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLL 506
           +F+N +  +L  WNA++ GY  +      +++F  + +  + + D  T  + +KACG +L
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL 160

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++ G+ +H   +K G  LD+ V + ++ MY KCGA+ +A  +F+ +P  + V+W +MI 
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMIC 220

Query: 567 GCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
              +NG    +  +  +M    G++PD  T   ++   +    ++ G  IH   +KL  S
Sbjct: 221 AFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLS 280

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            +  V  ++V MY+KCG + +A + F + + +N V WN M+   +  G+  E   L ++M
Sbjct: 281 EEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEM 340

Query: 686 KAHGVE--PDSVTFIGVLSAC 704
           +  G E   + VT + VL AC
Sbjct: 341 QIQGEEMKANEVTILNVLPAC 361


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 201/554 (36%), Positives = 313/554 (56%), Gaps = 49/554 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H   +K     D F    L+++Y ++  + +A  LF+     +  ++  +I GY  S
Sbjct: 58  KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117

Query: 471 NNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
               +A+ELF  +H   E L ++ T A+ ++AC  +  L  G Q+H + +K G   D+ V
Sbjct: 118 VRFLEAIELFVRLHR--EVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           S+ ++D+Y KCG M ++  +F + P  +DV W T+I G V  G+ + AL ++  M    V
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
              E T++  ++A + L ALE G QIH+  +K     D  V  +L+DMYAKCG+I+DA +
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F  M+ ++ V WNAM+ G + HG G E L++F+ M+   V+PD +TF+GVLSAC+  GL
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           + +    F  M + +GIEP +EHY+ +V  LGR G   +A +LI  +PF+ S  + RALL
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GAC +  D E G+  A++++ +EP D + +VLLSN++A A +WD+V S R  MKRK VKK
Sbjct: 416 GACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKK 475

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           +P                         +I   +E L  + K+ GY+P+ + VLLDVE+EE
Sbjct: 476 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 535

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--AN 903
           KER L+ HSE+LA ++G+I TP  S I                     +  +E +    N
Sbjct: 536 KERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDIN 595

Query: 904 RFHHLRDGMCPCAD 917
           RFHH ++G+C C D
Sbjct: 596 RFHHFQEGLCSCGD 609



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 197/396 (49%), Gaps = 47/396 (11%)

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S  +++S  +  AL      D  + G+ +H   LK G    +   N L+NMY K   +C 
Sbjct: 32  SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCD 91

Query: 386 ------------------------------------------LRTDQFTLASVLRASSSL 403
                                                     +  +QFT ASVL+A +++
Sbjct: 92  ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACATM 151

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            EGL+L  QIH H IK    +D FVS AL+DVY + G M  +  LF      +  TWN +
Sbjct: 152 -EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTV 210

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I G++   +  KAL LF +M     +  E+T ++A++AC  L  L+ G Q+H+  +K+ F
Sbjct: 211 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 270

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           + D+ V++ ++DMY KCG++ DA+ +F+ +   D+V+W  MISG   +G    AL I+ +
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDK 330

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKC 641
           M+ + V PD+ TF  ++ A +    L+QG+    ++I+ D   +P +     +V +  + 
Sbjct: 331 MQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ-DHGIEPCIEHYTCMVWLLGRG 389

Query: 642 GNIEDAYILFKQMDMRNTVL-WNAMLVGLAQHGNGE 676
           G+++ A  L  ++  + +V+ W A+L     H + E
Sbjct: 390 GHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIE 425



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 146/266 (54%), Gaps = 2/266 (0%)

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
           H S    +    A A++ C       +GK +H   +K G  LDL   + +L+MYVK   +
Sbjct: 30  HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA  +F+++P  + +++ T+I G  ++     A+ ++ ++    V+P++FTFA +++A 
Sbjct: 90  CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQAC 148

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + +  L  G QIH ++IK+   SD FV  +L+D+YAKCG +E++  LF +   RN V WN
Sbjct: 149 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWN 208

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            ++VG  Q G+GE+ L+LF +M  + V+   VT+   L AC+    +    +  H +  K
Sbjct: 209 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ-IHSLTVK 267

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEA 749
              + ++   + L+D   + G  K+A
Sbjct: 268 TTFDKDIVVTNALIDMYAKCGSIKDA 293



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 7/232 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   +   L LG   H  ++      D F++N LM +Y++CG +  +  LF + P R
Sbjct: 143 SVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHR 202

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + ++WN+++  +   G+G      +  RLF ++ E     + +T +  L+ C S   +  
Sbjct: 203 NDVTWNTVIVGHVQLGDGE-----KALRLFLNMLEYRVQATEVTYSSALRACASLAALEP 257

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +K     D  V+ AL+++Y+K G I++A+ +FD M ++D V W  M+  Y+ 
Sbjct: 258 GLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSM 317

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
           +G G E   +F  +  + + PD  +   VL   ++ G    +Q QAY   ++
Sbjct: 318 HGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLL--DQGQAYFTSMI 367



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 36/337 (10%)

Query: 46  HFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           H S S  +S  ++  L+  I   +   GK  H  IL      D F  N L+ MY +   L
Sbjct: 30  HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
             A +LFD+MP+R+ IS+ +++  YA S         E   LF  L   +   ++ T A 
Sbjct: 90  CDASKLFDEMPERNTISFVTLIQGYAES-----VRFLEAIELFVRLHREV-LPNQFTFAS 143

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L+ C +   +     +H + +KIGL  D FVS AL+++Y+K G++  +  LF     R+
Sbjct: 144 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN 203

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQA 283
            V W  ++  + + G GE+   LF+++    +   + +    L   + L       Q+ +
Sbjct: 204 DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHS 263

Query: 284 YAIKL--------------------------LLYN--NNSNVVLWNKKLSGYLQVGDNHG 315
             +K                           L+++  N  + V WN  +SGY   G    
Sbjct: 264 LTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGRE 323

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           A+  F  M  + V+ D +TF+  L+A A    L+ GQ
Sbjct: 324 ALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQ 360



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/506 (23%), Positives = 202/506 (39%), Gaps = 96/506 (18%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A  L+ C+        + +H   LK G   D F    L+N+Y K   + +A  LFD M E
Sbjct: 42  ANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE 101

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQV 281
           R+ + +  +++ YAE+    E   LFV LHR  L P+  +   VL   + + G     Q+
Sbjct: 102 RNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACATMEGLNLGNQI 160

Query: 282 QAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGDN 313
             + IK+ L+++                            + N V WN  + G++Q+GD 
Sbjct: 161 HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDG 220

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F+NM+   VQ   VT+  AL A A    L  G QIH  T+K+ F   ++V N+L
Sbjct: 221 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNAL 280

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I+MY+K G +   R   F L               ++KQ            D     A+I
Sbjct: 281 IDMYAKCGSIKDARL-VFDL---------------MNKQ------------DEVSWNAMI 312

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
             Y  +G   EA                               L +F  M  +  + D++
Sbjct: 313 SGYSMHGLGREA-------------------------------LRIFDKMQETEVKPDKL 341

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFN 551
           T    + AC    +L QG Q +  +M     ++ C+      +++  + G +  A  + +
Sbjct: 342 TFVGVLSACANAGLLDQG-QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID 400

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           +IP  P  + W  ++  CV + + +L   I  Q  L     D+ T  +L    +     +
Sbjct: 401 EIPFQPSVMVWRALLGACVIHNDIELG-RISAQRVLEMEPQDKATHVLLSNMYATAKRWD 459

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVD 636
               +  N+ +     +P  G+S ++
Sbjct: 460 NVASVRKNMKRKGVKKEP--GLSWIE 483



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 17/205 (8%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  FL    +   ++   + S LR   S + L  G   H+  + ++   D  +TN L+ 
Sbjct: 223 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALID 282

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY++CGS+  AR +FD M  +D +SWN++++ Y+  G G      E  R+F  ++E+   
Sbjct: 283 MYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGR-----EALRIFDKMQETEVK 337

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS------GALVNIYSKFGKI 210
             +LT   +L  C ++G +       G A    ++ D  +         +V +  + G +
Sbjct: 338 PDKLTFVGVLSACANAGLL-----DQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHL 392

Query: 211 REAKFLFDGMQ-ERDVVLWKVMLRA 234
            +A  L D +  +  V++W+ +L A
Sbjct: 393 DKAVKLIDEIPFQPSVMVWRALLGA 417


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 239/839 (28%), Positives = 390/839 (46%), Gaps = 116/839 (13%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H  ++ S      F    L+ MY++CG +  ARR+FD +   D I W+S++A 
Sbjct: 184 LAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIAC 243

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y   G                 +E++   SR+                          K+
Sbjct: 244 YHRVG---------------CYQEALALFSRMD-------------------------KM 263

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   D+     +++  +  G++  A  L   M     V W  ++  +A++G    V  L+
Sbjct: 264 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 323

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN-------------- 293
            D+   GL P   +   +L   +++    E +Q+ A A+   L  N              
Sbjct: 324 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 383

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           N+V+WN  L+G++Q      AI  F  M+R  +Q D  TF+  L
Sbjct: 384 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 443

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC----------------- 382
            A     +  LG+Q+H  T+K+    ++ V N+ ++MYSK G                  
Sbjct: 444 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 503

Query: 383 ------------------VC--------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                             VC        G+  D  + ++ + A S++       KQIH  
Sbjct: 504 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI-RATETGKQIHCL 562

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           AIK    ++  V ++LID+Y ++G +  +  +F   D   +   NA+I G++ +NN  +A
Sbjct: 563 AIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEA 622

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILD 535
           ++LF  +   G +   +T ++ +  C   L    GKQ+H Y +KSG   D   +   +  
Sbjct: 623 IQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAG 682

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +Y+K   + DA  +  ++P   ++  WT +ISG   NG  D +L  + +MR   V  DE 
Sbjct: 683 IYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEA 742

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TFA ++KA S +TA   G++IH  + K    S      +L+DMY+KCG++  ++  FK++
Sbjct: 743 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 802

Query: 655 DMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
             +  ++ WN+M+VG A++G  +E L LF+ M+   ++PD VTF+GVL AC+++GL+SE 
Sbjct: 803 KNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEG 862

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
              F  MR+ YG+ P ++HY+  +D LGR G  +EA E I  +PF     +    L ACR
Sbjct: 863 RHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACR 922

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +  D E GK  A KL+ LEP  SS YVLLS++ AA   W +    R  M+ K V K P 
Sbjct: 923 MHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPG 981



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 196/717 (27%), Positives = 317/717 (44%), Gaps = 57/717 (7%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           ++ H RIL         L ++L+ +Y + G + YA        +R   + +S+L+ +A S
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  +  +V   FR  R          +  LA +L  C   G +     VH   +K G   
Sbjct: 146 G--SPGDVLGAFRYIRCTAGG--RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 201

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             F   ALV++Y+K G +  A+ +FDG+   D + W  M+  Y   G  +E   LF  + 
Sbjct: 202 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 261

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           + G  PD  ++  ++  ++  G+        +A  LL      + V WN  +SG+ Q G 
Sbjct: 262 KMGSAPDQVTLVTIISTLASSGRLD------HATALLKKMPTPSTVAWNAVISGHAQSGL 315

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
               +  + +M    +     TF   L+A A       GQQ+H   +  G  + V VG+S
Sbjct: 316 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 375

Query: 373 LINMYSKMGCVCG-------------------------------------------LRTD 389
           LIN+Y+K GC                                              L+TD
Sbjct: 376 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 435

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           +FT  S+L A + L    +L KQ+H   IKN      FV+ A +D+Y + G++ +A+ LF
Sbjct: 436 EFTFVSILGACTYL-SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 494

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                 D  +WNA+  G   +    +A+ +   M   G   D+++ +TA+ AC  +   +
Sbjct: 495 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 554

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            GKQ+H  A+K G   +  V S ++D+Y K G +  ++ IF  + A   V    +I+G V
Sbjct: 555 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 614

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC-SSDP 628
            N  ED A+ ++ Q+   G+ P   TF+ ++   S       G+Q+H   +K      D 
Sbjct: 615 QNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDT 674

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            +G+SL  +Y K   +EDA  L  +M D +N   W A++ G AQ+G G+ +L  F  M+ 
Sbjct: 675 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 734

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             V  D  TF  VL ACS     ++  E  H +  K G        S L+D   + G
Sbjct: 735 CNVRSDEATFASVLKACSDVTAFADGKE-IHGLITKSGFGSYETATSALIDMYSKCG 790



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 206/433 (47%), Gaps = 16/433 (3%)

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-- 388
           D     V L+A +    L  G+Q+H   +KSGF S+V    +L++MY+K G V   R   
Sbjct: 167 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 226

Query: 389 DQFTLASVLRASSSLP---------EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           D       +  SS +          E L L  ++     K  +  D      +I     +
Sbjct: 227 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMD----KMGSAPDQVTLVTIISTLASS 282

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G +  A  L +         WNA+I G+  S      L L+  M + G      T A+ +
Sbjct: 283 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 342

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
            A   +    +G+QMHA A+  G + ++ V S ++++Y KCG   DA+++F+     + V
Sbjct: 343 SAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIV 402

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            W  M++G V N   + A+ ++  M    +  DEFTF  ++ A + L++   G+Q+H   
Sbjct: 403 MWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVT 462

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           IK       FV  + +DMY+K G I DA  LF  +  ++++ WNA+ VGLAQ+   EE +
Sbjct: 463 IKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAV 522

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            + + M+ HG+ PD V+F   ++ACS     +E  +  H +  KYGI       S L+D 
Sbjct: 523 CMLKRMRLHGITPDDVSFSTAINACSNI-RATETGKQIHCLAIKYGICSNHAVGSSLIDL 581

Query: 740 LGRAGRTKEAGEL 752
             + G  + + ++
Sbjct: 582 YSKHGDVESSRKI 594



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 262/601 (43%), Gaps = 83/601 (13%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S+L  A +    + G+  HA  +      + F+ ++L+ +Y++CG    A+ +F
Sbjct: 334 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 393

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D   +++++ WN++L  +  +     E   E  R+F+ +      T   T   +L  C  
Sbjct: 394 DLSCEKNIVMWNAMLTGFVQN-----ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 448

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
               +  + VH   +K  +    FV+ A +++YSK+G I +AK LF  +  +D + W  +
Sbjct: 449 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNAL 508

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLL 290
               A+N   EE   +   +   G+ PDD S    +   S++      +Q+   AIK  +
Sbjct: 509 TVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGI 568

Query: 291 YNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N+                            S++V  N  ++G++Q  +   AI+ F  
Sbjct: 569 CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQ 628

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMG 381
           +++  ++  SVTF   L+  +G+ N  +G+Q+H  TLKSG  Y   ++G SL  +Y K  
Sbjct: 629 VLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSK 688

Query: 382 CV--------------------------------------------CGLRTDQFTLASVL 397
            +                                            C +R+D+ T ASVL
Sbjct: 689 MLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVL 748

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFD 456
           +A S +       K+IH    K+   +    ++ALID+Y + G +  + E   E K+  D
Sbjct: 749 KACSDV-TAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQD 807

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN+MI G+  +  + +AL LF  M     + DE+T    + AC    ++ +G+    
Sbjct: 808 IMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFG 867

Query: 517 YAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
              K  G    L   +  +D+  + G + +AQ   + +P  PD V W T ++ C  + +E
Sbjct: 868 SMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDE 927

Query: 575 D 575
           +
Sbjct: 928 E 928



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 16/230 (6%)

Query: 11  PRHKHTY---VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTS 67
           P HK+ +    I S + ++ Y +      SL+ F +  H +  S  + + S+L+     +
Sbjct: 701 PDHKNLFEWTAIISGYAQNGYGDH-----SLVSFWRMRHCNVRSDEATFASVLKACSDVT 755

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSIL 126
               GK  H  I  S        T+ L+ MYS+CG ++ +   F ++ ++ D++ WNS++
Sbjct: 756 AFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             +A +G  +     E   LF+ + E       +T   +L  C  SG +       G   
Sbjct: 816 VGFAKNGYAD-----EALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMR 870

Query: 187 KI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           K+ GL          +++  + G ++EA+   D +  R D V+W   L A
Sbjct: 871 KVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 920


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 239/839 (28%), Positives = 390/839 (46%), Gaps = 116/839 (13%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H  ++ S      F    L+ MY++CG +  ARR+FD +   D I W+S++A 
Sbjct: 174 LAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIAC 233

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y   G                 +E++   SR+                          K+
Sbjct: 234 YHRVG---------------CYQEALALFSRMD-------------------------KM 253

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   D+     +++  +  G++  A  L   M     V W  ++  +A++G    V  L+
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 313

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN-------------- 293
            D+   GL P   +   +L   +++    E +Q+ A A+   L  N              
Sbjct: 314 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           N+V+WN  L+G++Q      AI  F  M+R  +Q D  TF+  L
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC----------------- 382
            A     +  LG+Q+H  T+K+    ++ V N+ ++MYSK G                  
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 493

Query: 383 ------------------VC--------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                             VC        G+  D  + ++ + A S++       KQIH  
Sbjct: 494 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI-RATETGKQIHCL 552

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           AIK    ++  V ++LID+Y ++G +  +  +F   D   +   NA+I G++ +NN  +A
Sbjct: 553 AIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEA 612

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILD 535
           ++LF  +   G +   +T ++ +  C   L    GKQ+H Y +KSG   D   +   +  
Sbjct: 613 IQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAG 672

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +Y+K   + DA  +  ++P   ++  WT +ISG   NG  D +L  + +MR   V  DE 
Sbjct: 673 IYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEA 732

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TFA ++KA S +TA   G++IH  + K    S      +L+DMY+KCG++  ++  FK++
Sbjct: 733 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792

Query: 655 DMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
             +  ++ WN+M+VG A++G  +E L LF+ M+   ++PD VTF+GVL AC+++GL+SE 
Sbjct: 793 KNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEG 852

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
              F  MR+ YG+ P ++HY+  +D LGR G  +EA E I  +PF     +    L ACR
Sbjct: 853 RHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACR 912

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +  D E GK  A KL+ LEP  SS YVLLS++ AA   W +    R  M+ K V K P 
Sbjct: 913 MHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPG 971



 Score =  258 bits (660), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 196/717 (27%), Positives = 318/717 (44%), Gaps = 57/717 (7%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           ++ H RIL         L ++L+ +Y + G + YA        +R   + +S+L+ +A S
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  +  +V   FR  R    +     +  LA +L  C   G +     VH   +K G   
Sbjct: 136 G--SPGDVLGAFRYIRC--TAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 191

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             F   ALV++Y+K G +  A+ +FDG+   D + W  M+  Y   G  +E   LF  + 
Sbjct: 192 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           + G  PD  ++  ++  ++  G+        +A  LL      + V WN  +SG+ Q G 
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLD------HATALLKKMPTPSTVAWNAVISGHAQSGL 305

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
               +  + +M    +     TF   L+A A       GQQ+H   +  G  + V VG+S
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365

Query: 373 LINMYSKMGCVCG-------------------------------------------LRTD 389
           LIN+Y+K GC                                              L+TD
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           +FT  S+L A + L    +L KQ+H   IKN      FV+ A +D+Y + G++ +A+ LF
Sbjct: 426 EFTFVSILGACTYL-SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                 D  +WNA+  G   +    +A+ +   M   G   D+++ +TA+ AC  +   +
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 544

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            GKQ+H  A+K G   +  V S ++D+Y K G +  ++ IF  + A   V    +I+G V
Sbjct: 545 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 604

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC-SSDP 628
            N  ED A+ ++ Q+   G+ P   TF+ ++   S       G+Q+H   +K      D 
Sbjct: 605 QNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDT 664

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            +G+SL  +Y K   +EDA  L  +M D +N   W A++ G AQ+G G+ +L  F  M+ 
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 724

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             V  D  TF  VL ACS     ++  E  H +  K G        S L+D   + G
Sbjct: 725 CNVRSDEATFASVLKACSDVTAFADGKE-IHGLITKSGFGSYETATSALIDMYSKCG 780



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 262/601 (43%), Gaps = 83/601 (13%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S+L  A +    + G+  HA  +      + F+ ++L+ +Y++CG    A+ +F
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D   +++++ WN++L  +  +     E   E  R+F+ +      T   T   +L  C  
Sbjct: 384 DLSCEKNIVMWNAMLTGFVQN-----ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
               +  + VH   +K  +    FV+ A +++YSK+G I +AK LF  +  +D + W  +
Sbjct: 439 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNAL 498

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLL 290
               A+N   EE   +   +   G+ PDD S    +   S++      +Q+   AIK  +
Sbjct: 499 TVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGI 558

Query: 291 YNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N+                            S++V  N  ++G++Q  +   AI+ F  
Sbjct: 559 CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQ 618

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMG 381
           +++  ++  SVTF   L+  +G+ N  +G+Q+H  TLKSG  Y   ++G SL  +Y K  
Sbjct: 619 VLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSK 678

Query: 382 CV--------------------------------------------CGLRTDQFTLASVL 397
            +                                            C +R+D+ T ASVL
Sbjct: 679 MLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVL 738

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFD 456
           +A S +       K+IH    K+   +    ++ALID+Y + G +  + E   E K+  D
Sbjct: 739 KACSDV-TAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQD 797

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN+MI G+  +  + +AL LF  M     + DE+T    + AC    ++ +G+    
Sbjct: 798 IMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFG 857

Query: 517 YAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
              K  G    L   +  +D+  + G + +AQ   + +P  PD V W T ++ C  + +E
Sbjct: 858 PMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDE 917

Query: 575 D 575
           +
Sbjct: 918 E 918



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 16/230 (6%)

Query: 11  PRHKHTY---VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTS 67
           P HK+ +    I S + ++ Y +      SL+ F +  H +  S  + + S+L+     +
Sbjct: 691 PDHKNLFEWTAIISGYAQNGYGDH-----SLVSFWRMRHCNVRSDEATFASVLKACSDVT 745

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSIL 126
               GK  H  I  S        T+ L+ MYS+CG ++ +   F ++ ++ D++ WNS++
Sbjct: 746 AFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             +A +G  +     E   LF+ + E       +T   +L  C  SG +       G   
Sbjct: 806 VGFAKNGYAD-----EALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMR 860

Query: 187 KI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           K+ GL          +++  + G ++EA+   D +  R D V+W   L A
Sbjct: 861 KVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 910


>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 827

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 250/845 (29%), Positives = 399/845 (47%), Gaps = 130/845 (15%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P+FSL   P L         +S+ + +IL+   S++ L LGK  H+  + +      F+ 
Sbjct: 22  PNFSLLHTPPL---------TSTTYSTILQ---SSNSLTLGKQLHSHSIKTGFYNHNFVQ 69

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR--- 148
             L+ MYS   S   A  +FDKM  ++L SW ++L  + + G        +GF LF    
Sbjct: 70  TKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGL-----FYKGFMLFEEFL 124

Query: 149 --SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
              L E + F        +L +C   G +     VHG  LK G V + +V  AL+++Y K
Sbjct: 125 CDGLGEKLDF---FVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGK 181

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + EAK + +GM ++D V W  ++ A   NG   E   L  ++  S L P        
Sbjct: 182 CGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEP-------- 233

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                        NVV W+  + G+     +  ++E F  M+ +
Sbjct: 234 -----------------------------NVVTWSAVIGGFSSNAYDVESVELFARMVGA 264

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            V  D+ T    L A +    L +G+++HG  ++   +S   V N+L+ MY +    CG 
Sbjct: 265 GVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRR----CGD 320

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
               F + S                            A S+    +I  Y  NG++ +A+
Sbjct: 321 MKSAFKIFSKFARK----------------------CAASY--NTMIVGYLENGNVGKAK 356

Query: 447 YLFEN--KDGF--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            LF    ++G   D  +WN MI G++ +     AL LF  +   G   D  T+ + +   
Sbjct: 357 ELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGF 416

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             +  ++QGK++H+ A+  G + +  V   +++MY KC  ++ AQ  F++I   D   W 
Sbjct: 417 ADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWN 476

Query: 563 TMIS-----------------------------------GCVDNGEEDLALSIYHQMRLS 587
            +IS                                   G V+N + DLA+ ++++M++S
Sbjct: 477 ALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVS 536

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            + PD +T  I++ A S L  + +G+Q+HA  I+    SD  +G +LVDMYAKCG+I+  
Sbjct: 537 SLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHC 596

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
           Y ++ ++   N V  NAML   A HG+GEE + +F  M    V PD VTF+ VLS+C + 
Sbjct: 597 YQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHA 656

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           G +   YE F+LM E Y I P ++HY+ +VD L RAG+  EA +LI +MP EA +    A
Sbjct: 657 GSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSA 715

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LLG C +  +   G+  AEKL+ LEP ++  YVLL+N++A+A +W D+   R  M  K +
Sbjct: 716 LLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGM 775

Query: 828 KKDPA 832
           +K P 
Sbjct: 776 QKSPG 780


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 239/839 (28%), Positives = 390/839 (46%), Gaps = 116/839 (13%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H  ++ S      F    L+ MY++CG +  ARR+FD +   D I W+S++A 
Sbjct: 174 LAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIAC 233

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y   G                 +E++   SR+                          K+
Sbjct: 234 YHRVG---------------CYQEALALFSRMD-------------------------KM 253

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   D+     +++  +  G++  A  L   M     V W  ++  +A++G    V  L+
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 313

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN-------------- 293
            D+   GL P   +   +L   +++    E +Q+ A A+   L  N              
Sbjct: 314 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           N+V+WN  L+G++Q      AI  F  M+R  +Q D  TF+  L
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC----------------- 382
            A     +  LG+Q+H  T+K+    ++ V N+ ++MYSK G                  
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 493

Query: 383 ------------------VC--------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                             VC        G+  D  + ++ + A S++       KQIH  
Sbjct: 494 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI-RATETGKQIHCL 552

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           AIK    ++  V ++LID+Y ++G +  +  +F   D   +   NA+I G++ +NN  +A
Sbjct: 553 AIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEA 612

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILD 535
           ++LF  +   G +   +T ++ +  C   L    GKQ+H Y +KSG   D   +   +  
Sbjct: 613 IQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAG 672

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +Y+K   + DA  +  ++P   ++  WT +ISG   NG  D +L  + +MR   V  DE 
Sbjct: 673 IYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEA 732

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TFA ++KA S +TA   G++IH  + K    S      +L+DMY+KCG++  ++  FK++
Sbjct: 733 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792

Query: 655 DMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
             +  ++ WN+M+VG A++G  +E L LF+ M+   ++PD VTF+GVL AC+++GL+SE 
Sbjct: 793 KNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEG 852

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
              F  MR+ YG+ P ++HY+  +D LGR G  +EA E I  +PF     +    L ACR
Sbjct: 853 RHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACR 912

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +  D E GK  A KL+ LEP  SS YVLLS++ AA   W +    R  M+ K V K P 
Sbjct: 913 MHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPG 971



 Score =  258 bits (660), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 196/717 (27%), Positives = 318/717 (44%), Gaps = 57/717 (7%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           ++ H RIL         L ++L+ +Y + G + YA        +R   + +S+L+ +A S
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  +  +V   FR  R    +     +  LA +L  C   G +     VH   +K G   
Sbjct: 136 G--SPGDVLGAFRYIRC--TAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 191

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             F   ALV++Y+K G +  A+ +FDG+   D + W  M+  Y   G  +E   LF  + 
Sbjct: 192 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           + G  PD  ++  ++  ++  G+        +A  LL      + V WN  +SG+ Q G 
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLD------HATALLKKMPTPSTVAWNAVISGHAQSGL 305

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
               +  + +M    +     TF   L+A A       GQQ+H   +  G  + V VG+S
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365

Query: 373 LINMYSKMGCVCG-------------------------------------------LRTD 389
           LIN+Y+K GC                                              L+TD
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           +FT  S+L A + L    +L KQ+H   IKN      FV+ A +D+Y + G++ +A+ LF
Sbjct: 426 EFTFVSILGACTYL-SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                 D  +WNA+  G   +    +A+ +   M   G   D+++ +TA+ AC  +   +
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 544

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            GKQ+H  A+K G   +  V S ++D+Y K G +  ++ IF  + A   V    +I+G V
Sbjct: 545 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 604

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC-SSDP 628
            N  ED A+ ++ Q+   G+ P   TF+ ++   S       G+Q+H   +K      D 
Sbjct: 605 QNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDT 664

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            +G+SL  +Y K   +EDA  L  +M D +N   W A++ G AQ+G G+ +L  F  M+ 
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 724

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             V  D  TF  VL ACS     ++  E  H +  K G        S L+D   + G
Sbjct: 725 CNVRSDEATFASVLKACSDVTAFADGKE-IHGLITKSGFGSYETATSALIDMYSKCG 780



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 262/601 (43%), Gaps = 83/601 (13%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S+L  A +    + G+  HA  +      + F+ ++L+ +Y++CG    A+ +F
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D   +++++ WN++L  +  +     E   E  R+F+ +      T   T   +L  C  
Sbjct: 384 DLSCEKNIVMWNAMLTGFVQN-----ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
               +  + VH   +K  +    FV+ A +++YSK+G I +AK LF  +  +D + W  +
Sbjct: 439 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNAL 498

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLL 290
               A+N   EE   +   +   G+ PDD S    +   S++      +Q+   AIK  +
Sbjct: 499 TVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGI 558

Query: 291 YNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N+                            S++V  N  ++G++Q  +   AI+ F  
Sbjct: 559 CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQ 618

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMG 381
           +++  ++  SVTF   L+  +G+ N  +G+Q+H  TLKSG  Y   ++G SL  +Y K  
Sbjct: 619 VLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSK 678

Query: 382 CV--------------------------------------------CGLRTDQFTLASVL 397
            +                                            C +R+D+ T ASVL
Sbjct: 679 MLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVL 738

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFD 456
           +A S +       K+IH    K+   +    ++ALID+Y + G +  + E   E K+  D
Sbjct: 739 KACSDV-TAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQD 797

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN+MI G+  +  + +AL LF  M     + DE+T    + AC    ++ +G+    
Sbjct: 798 IMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFG 857

Query: 517 YAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
              K  G    L   +  +D+  + G + +AQ   + +P  PD V W T ++ C  + +E
Sbjct: 858 SMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDE 917

Query: 575 D 575
           +
Sbjct: 918 E 918



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 16/230 (6%)

Query: 11  PRHKHTY---VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTS 67
           P HK+ +    I S + ++ Y +      SL+ F +  H +  S  + + S+L+     +
Sbjct: 691 PDHKNLFEWTAIISGYAQNGYGDH-----SLVSFWRMRHCNVRSDEATFASVLKACSDVT 745

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSIL 126
               GK  H  I  S        T+ L+ MYS+CG ++ +   F ++ ++ D++ WNS++
Sbjct: 746 AFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             +A +G  +     E   LF+ + E       +T   +L  C  SG +       G   
Sbjct: 806 VGFAKNGYAD-----EALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMR 860

Query: 187 KI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           K+ GL          +++  + G ++EA+   D +  R D V+W   L A
Sbjct: 861 KVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 910


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 241/782 (30%), Positives = 361/782 (46%), Gaps = 150/782 (19%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA+ +L     S  V WN  +  +++ G    AI     M+R+  + D  T    L A  
Sbjct: 69  YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACG 128

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM--------------------------- 376
              +   G   HG    +GF S V + N+L+ M                           
Sbjct: 129 ELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVIS 188

Query: 377 --------------------YSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSK 411
                               +SKM  +        R+D  ++ ++L A  SL + +  +K
Sbjct: 189 WNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL-KAVPQTK 247

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H +AI+N T  D FV  ALID Y + G M  A  +F   +  D+ +WNAM+ GY  S 
Sbjct: 248 EVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 307

Query: 472 N-----------------------------------SHKALELFSHMHTSGERLDEITIA 496
           N                                   SH+AL +F  M  SG   + +TI 
Sbjct: 308 NFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTII 367

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKS----------GFELDLCVSSGILDMYVKCGAMVDA 546
           + + AC  L    QG ++HAY++K+          G + DL V + ++DMY KC +   A
Sbjct: 368 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 427

Query: 547 QSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKA 602
           +SIF+DIP  +   V WT MI G    G+ + AL ++ +M     GV P+ +T + ++ A
Sbjct: 428 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 487

Query: 603 SSCLTALEQGRQIHANLIKLDC--SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            + L A+  G+QIHA +++     SS  FV   L++MY+KCG+++ A  +F  M  ++ +
Sbjct: 488 CAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAI 547

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +M+ G   HG G E L +F+ M+  G  PD +TF+ VL ACS+ G+V +    F  M
Sbjct: 548 SWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSM 607

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
              YG+ P  EHY++ +D L R GR  +A + +  MP E +A +  ALL ACRV  + E 
Sbjct: 608 SADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVEL 667

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
            +    KL+ +   +  +Y L+SNI+A A +W DV   R  MK+  +KK P         
Sbjct: 668 AEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQK 727

Query: 832 --------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                         +  I+A +E LI RIK  GYVP+T+F L DV+EEEK   L  HSEK
Sbjct: 728 GTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEK 787

Query: 878 LARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCP 914
           LA AYGL++T P   I   K                            +RFHH ++G C 
Sbjct: 788 LALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCS 847

Query: 915 CA 916
           C 
Sbjct: 848 CG 849



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 242/571 (42%), Gaps = 103/571 (18%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G + H  I  +    + F+ N L+ MYSRCGSL  A  +FD++  R   D+ISWNSI++A
Sbjct: 136 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 195

Query: 129 YAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           +  S     A ++     L    + +   +  +++  +L  C S   V  ++ VHG A++
Sbjct: 196 HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 255

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   D FV  AL++ Y+K G +  A  +F+ M+ +DVV W  M+  Y+++G  +  F L
Sbjct: 256 NGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 315

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F ++ +  +  D                                     +V W   ++GY
Sbjct: 316 FKNMRKENIPLD-------------------------------------MVTWTAVIAGY 338

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS------ 361
            Q G +H A+  F  MI S    + VT +  L+A A     + G +IH  +LK+      
Sbjct: 339 SQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLD 398

Query: 362 ----GFYSAVIVGNSLINMYSKMGCVCGLRT----------------------------- 388
               G    ++V N+LI+MYSK       R+                             
Sbjct: 399 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 458

Query: 389 ------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS--FV 428
                             + +T++ +L A + L   + + KQIH + +++     S  FV
Sbjct: 459 DALKLFVEMISEPYGVAPNAYTISCILMACAHL-AAIRIGKQIHAYVLRHHQYDSSAYFV 517

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +  LI++Y + G +  A ++F++       +W +M+ GY +     +AL++F  M  +G 
Sbjct: 518 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 577

Query: 489 RLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
             D+IT    + AC    M+ QG     + +   G        +  +D+  + G +  A 
Sbjct: 578 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAW 637

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
               D+P  P  V W  ++S C  +   +LA
Sbjct: 638 KTVKDMPMEPTAVVWVALLSACRVHSNVELA 668



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 150/302 (49%), Gaps = 9/302 (2%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           + T ++  Y   G+   A  + E         WN +I  +I       A+ +   M  +G
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            RLD  T+   +KACG L   + G   H     +GFE ++ + + ++ MY +CG++ +A 
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 548 SIFNDIPA---PDDVAWTTMISGCVDNGEEDLALSIYHQMRL------SGVVPDEFTFAI 598
            IF++I      D ++W +++S  V +     AL ++ +M L      +    D  +   
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A   L A+ Q +++H N I+     D FVG +L+D YAKCG +E+A  +F  M+ ++
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V WNAM+ G +Q GN +   +LF++M+   +  D VT+  V++  S  G   EA   F 
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352

Query: 719 LM 720
            M
Sbjct: 353 QM 354


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 235/705 (33%), Positives = 342/705 (48%), Gaps = 121/705 (17%)

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA---VIVGNSLINMYSKMGCV------ 383
           V+ L+A + + G D   LG++ H   LK GF          N+L++MY+++G V      
Sbjct: 173 VSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSL 232

Query: 384 ------------------------------C-------------GLRTDQFTLASVLRAS 400
                                         C             G+R D  T AS L A 
Sbjct: 233 FRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPAC 292

Query: 401 SSLPEGLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFDL 457
           S L E L L +++H   +K+ D  A+SFV++AL+D+Y  N  +A A  +F+   +    L
Sbjct: 293 SRL-EMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQL 351

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHA 516
             WNAMI GY  +    +ALELFS M   +G    E T++  + AC         + MH 
Sbjct: 352 GMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHG 411

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           Y +K G   +  V + ++DMY + G M  A+ IF  I   D V+W T+I+GCV  G    
Sbjct: 412 YVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAE 471

Query: 577 ALSIYHQMRLSG----------------VVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           A  +  +M+L                   +P+  T   L+   + L A  +G++IH   +
Sbjct: 472 AFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAV 531

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           +    SD  VG +LVDMYAKCG +  +  +F ++  RN + WN +++    HG G+E + 
Sbjct: 532 RHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVA 591

Query: 681 LFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           LF++M A G   P+ VTFI  L+ACS++GLV    E FH M   +G++P  + ++ +VD 
Sbjct: 592 LFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDV 651

Query: 740 LGRAGRTKEAGELILSM-PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
           LGRAGR  EA  +I SM P E   S   +LLGACR+  + E G+  AE+L  LEP ++S 
Sbjct: 652 LGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASH 711

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLI 835
           YVLL NI++AA  WD   + R  M+R+ V K+P                       +  +
Sbjct: 712 YVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEV 771

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILS 895
            A ++ L +R++  GY PDT  VL DV+E+EK   L YHSEKLA A+GL+  PP + I  
Sbjct: 772 HAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRV 831

Query: 896 NKEPLYAN-----------------------RFHHLRDGMCPCAD 917
            K     N                       RFHH RDG C C D
Sbjct: 832 AKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGD 876



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 136/607 (22%), Positives = 238/607 (39%), Gaps = 117/607 (19%)

Query: 74  STHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSILAAY 129
           S HA  L  + +  P   + N L+T Y+RCG L  A  LF       RD +S+NS+++A 
Sbjct: 84  SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL----SSGYVWASETVHGYA 185
               +   E   +  R    L E     S  TL  +L  C       G     E  H +A
Sbjct: 144 CLFRQW--ERALDALRDM--LAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREA-HAFA 198

Query: 186 LKIGLV---WDEFVSGALVNIYSKFGKIREAKFLFDGMQER------DVVLWKVMLRAYA 236
           LK G +    + F   AL+++Y++ G + +A+ LF            DVV W  M+    
Sbjct: 199 LKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLV 258

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS------------------------- 271
           + G   E   +  D+   G+ PD  +    L   S                         
Sbjct: 259 QGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANS 318

Query: 272 -------DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM- 323
                  D+   +E+   A  +  ++   +  + +WN  + GY Q G +  A+E F  M 
Sbjct: 319 FVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRME 378

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM--- 380
             +       T    L A A ++     + +HG  +K G      V N+L++MY+++   
Sbjct: 379 AEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEM 438

Query: 381 -----------------------GCVC-GLRTDQFTLASVLR----------------AS 400
                                  GCV  G   + F L + ++                A 
Sbjct: 439 DVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAH 498

Query: 401 SSLPEGLHL---------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
             +P  + L                K+IH +A+++   +D  V +AL+D+Y + G +A +
Sbjct: 499 RCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAAS 558

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGC 504
             +F+     ++ TWN +I  Y +     +A+ LF  M   GE   +E+T   A+ AC  
Sbjct: 559 RAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSH 618

Query: 505 LLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI-PAPDDV-AW 561
             ++ +G ++ H      G +    + + ++D+  + G + +A SI   + P    V AW
Sbjct: 619 SGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAW 678

Query: 562 TTMISGC 568
           ++++  C
Sbjct: 679 SSLLGAC 685



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 22/216 (10%)

Query: 63  AISTSDLLLGK-STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           A + S+   GK + H  ++      +RF+ N LM MY+R G +  ARR+F  +  RD++S
Sbjct: 396 ACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS 455

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT----------------FTSRLTLAPL 165
           WN+++      G     +  E F+L   ++                      + +TL  L
Sbjct: 456 WNTLITGCVVQG-----HAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTL 510

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L  C +       + +HGYA++  L  D  V  ALV++Y+K G +  ++ +FD +  R+V
Sbjct: 511 LPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNV 570

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           + W V++ AY  +G G+E   LF ++   G    +E
Sbjct: 571 ITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNE 606



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 154/366 (42%), Gaps = 60/366 (16%)

Query: 69  LLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSI 125
           L LG+  HA +L  + +  + F+ + L+ MY+    +  ARR+FD +P+  R L  WN++
Sbjct: 298 LALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAM 357

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +  YA +G        E   LF  +  E+    S  T++ +L  C  S      E +HGY
Sbjct: 358 ICGYAQAGMDE-----EALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGY 412

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +K G+  + FV  AL+++Y++ G++  A+ +F  +  RDVV W  ++      G   E 
Sbjct: 413 VVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEA 472

Query: 245 FHLFVDL------------------HRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYA 285
           F L  ++                  HR    P++ ++  +L G  +       +++  YA
Sbjct: 473 FQLVTEMQLPSPSPSSSSTTEEGEAHRC--MPNNITLMTLLPGCAALAAPARGKEIHGYA 530

Query: 286 IKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAI 317
           ++  L ++                              NV+ WN  +  Y   G    A+
Sbjct: 531 VRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAV 590

Query: 318 ECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQI-HGTTLKSGFYSAVIVGNSLIN 375
             F  M        + VTF+ ALAA + +  ++ G ++ HG     G      +   +++
Sbjct: 591 ALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVD 650

Query: 376 MYSKMG 381
           +  + G
Sbjct: 651 VLGRAG 656



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 27/272 (9%)

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVDA 546
           +LD   +  A+K+   L   +  + +HA A++          V + +L  Y +CG +  A
Sbjct: 60  QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119

Query: 547 QSIFNDIPAP--DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKAS 603
            ++F        D V++ ++IS      + + AL     M   G      FT   ++ A 
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLAC 179

Query: 604 SCLTALEQ---GRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           S L   +    GR+ HA  +K   LD   + F   +L+ MYA+ G ++DA  LF+     
Sbjct: 180 SHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAA 239

Query: 658 ------NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
                 + V WN M+  L Q G   E +++  DM + GV PD VTF   L ACS      
Sbjct: 240 FSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSR----- 294

Query: 712 EAYENFHLMREKYGI---EPEVEHYSFLVDAL 740
              E   L RE + +   + ++   SF+  AL
Sbjct: 295 --LEMLALGREMHAVVLKDADLAANSFVASAL 324



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H   +  +   D  + + L+ MY++CG L  +R +FD++P R++I+WN ++ AY  
Sbjct: 523 GKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGM 582

Query: 132 SGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYV-WASETVHGYALKIG 189
            G G+     E   LF  +      T + +T    L  C  SG V    E  HG     G
Sbjct: 583 HGLGD-----EAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHG 637

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRA 234
           +     +   +V++  + G++ EA  +   M+  E+ V  W  +L A
Sbjct: 638 VKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 234/681 (34%), Positives = 347/681 (50%), Gaps = 76/681 (11%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
            YAI +       N+++WN    G+    D   A+  +V MI   +  +S TF   L A 
Sbjct: 54  TYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKAC 113

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           A +     GQQIHG  LK G    + V  SLI MY K G     R +             
Sbjct: 114 AKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNG-----RXED------------ 156

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                  ++++   +   D V+     TALI  Y  NG +  A+ +F+     D+ +WNA
Sbjct: 157 -------ARKVFDQSSHRDVVS----YTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNA 205

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I GY  + N  +ALELF  M  +  + DE T+ T + AC     ++ G+Q+H++    G
Sbjct: 206 LISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHG 265

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  +L + + ++D+Y+KCG +  A  +F  +   D ++W T+I G         AL ++ 
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 325

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPF-VGISLVDMYAK 640
           +M  SG  P+E T   ++ A + L A++ GR IH  + K L   S+P  +  SL+DMYAK
Sbjct: 326 EMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAK 385

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+IE A  +F  M  R+   WNAM+ G A HG       +F  M+  G+EPD +TF+G+
Sbjct: 386 CGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGL 445

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS++G++      F  M E Y I P++EHY  ++D LG +G  KEA E+I SM  + 
Sbjct: 446 LSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDP 505

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              +  +LL AC++ G+ E G+  A+ L+ +EP +S +YVLLSNI+A A +W++V   R 
Sbjct: 506 DGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRA 565

Query: 821 EMKRKNVKKDPA------DLI---FAKVEGLIKRIKE--------------GGYVPDTDF 857
            +  K +KK P       D +   F   + L  R +E               G+VPDT  
Sbjct: 566 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSE 625

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------K 897
           VL ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K
Sbjct: 626 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 685

Query: 898 EPLYA---NRFHHLRDGMCPC 915
             + A    RFHH  DG+C C
Sbjct: 686 REIIARDRTRFHHFXDGVCSC 706



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/527 (24%), Positives = 226/527 (42%), Gaps = 102/527 (19%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +FD + + +L+ WN++   +A S +           L+  +       +  T  
Sbjct: 53  LTYAISVFDSIQEPNLLIWNTMFRGHALSSDP-----VSALYLYVCMISLGLVPNSYTFP 107

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S      + +HG+ LK+G   D +V  +L+ +Y K G+  +A+ +FD    R
Sbjct: 108 FLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHR 167

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV +  +++ YA NG+      +F          D+  V+                   
Sbjct: 168 DVVSYTALIKGYASNGYIXSAQKMF----------DEIPVK------------------- 198

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       +VV WN  +SGY + G+   A+E F  M+++NV+ D  T +  L+A A
Sbjct: 199 ------------DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACA 246

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------- 383
            + ++ LG+Q+H      GF S + + N+LI++Y K G V                    
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNT 306

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK- 419
                                   G   ++ T+ S+L A + L   + + + IHV+  K 
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG-AIDIGRWIHVYIDKR 365

Query: 420 -NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                  S + T+LID+Y + G +  A+ +F++     L++WNAMIFG+ +   ++ A +
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFD 425

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGI 533
           +FS M   G   D+IT    + AC    ML  G+ +       Y +    E   C    +
Sbjct: 426 IFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGC----M 481

Query: 534 LDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALS 579
           +D+    G   +A+ + N +   PD V W +++  C  +G  +L  S
Sbjct: 482 IDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGES 528



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 143/315 (45%), Gaps = 37/315 (11%)

Query: 72  GKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G+   AR + + S   D      L+  Y+  G +  A+++FD++P +D++SWN++++ YA
Sbjct: 152 GRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYA 211

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G     N  E   LF+ + ++       T+  +L  C  S  +     VH +    G 
Sbjct: 212 ETG-----NYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGF 266

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +  +  AL+++Y K G++  A  LF+G+  +DV+ W  ++  Y      +E   LF +
Sbjct: 267 GSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 326

Query: 251 LHRSGLCPDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYNN---- 293
           + RSG  P++ ++  +L   + LG             KR +      +++  L +     
Sbjct: 327 MLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKC 386

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                         N ++  WN  + G+   G  + A + F  M +  ++ D +TF+  L
Sbjct: 387 GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLL 446

Query: 340 AAVAGTDNLNLGQQI 354
           +A + +  L+LG+ I
Sbjct: 447 SACSHSGMLDLGRHI 461



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 12/229 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   ++L     ++ + LG+  H+ I +     +  + N L+ +Y +CG +  A  LF+ 
Sbjct: 236 STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +  +D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 296 LSYKDVISWNTLIGGYTH-----MNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+     +  +L+++Y+K G I  A+ +FD M  R +  W  M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +A +G     F +F  + + G+ PDD +   +L   S     DLG+
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGR 459


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 210/604 (34%), Positives = 333/604 (55%), Gaps = 54/604 (8%)

Query: 362 GFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
           G+ S    G++ I MYS+M    G+  D FTL  VL+A S +P  L + K++H    +  
Sbjct: 143 GYSSHNFFGDA-IEMYSRMQA-SGVNPDGFTLPCVLKACSGVPV-LEVGKRVHGQIFRLG 199

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
             +D FV   L+ +Y + G + +A  +FE  D  ++ +W +MI GY  +    +AL +F 
Sbjct: 200 FESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFG 259

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG--FELDLCVSSGILDMYVK 539
            M     + D I + + ++A   +  L+QGK +H   +K G  FE DL +S  +  MY K
Sbjct: 260 QMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLIS--LTAMYAK 317

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG ++ A+S F+ +  P+ + W  MISG   NG  + A+ ++ +M    +  D  T    
Sbjct: 318 CGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSA 377

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A + + +L+  + +   + K +  +D FV  +L+DM+AKCG+++ A  +F +   ++ 
Sbjct: 378 ILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDV 437

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           V+W+AM+VG   HG G++ + LF  MK  GV P+ VTF+G+L+AC+++GLV E +E FH 
Sbjct: 438 VVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHS 497

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M+  YGIE   +HY+ +VD LGR+G   EA + I +MP E   S+  ALLGAC++     
Sbjct: 498 MK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVT 556

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
            G++ AE+L +L+PF++  YV LSN++A++  WD V   R  M+ K + KD         
Sbjct: 557 LGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEIN 616

Query: 833 ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                             IF ++E L +R+KE G++P  + VL D+ +EEKE  L  HSE
Sbjct: 617 GKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSE 676

Query: 877 KLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMC 913
           +LA AYGLIST P + +                     L N+E +   ANRFHH ++G+C
Sbjct: 677 RLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVC 736

Query: 914 PCAD 917
            C D
Sbjct: 737 SCRD 740



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 165/301 (54%), Gaps = 1/301 (0%)

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           HL+ QIH   + +  V   F+ T  ++     G +  A  +F+      +  WNA+I GY
Sbjct: 86  HLN-QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
              N    A+E++S M  SG   D  T+   +KAC  + +L+ GK++H    + GFE D+
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V +G++ +Y KCG +  A+ +F  +   + V+WT+MISG   NG    AL I+ QMR  
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            V PD      +++A + +  LEQG+ IH  ++K+    +P + ISL  MYAKCG +  A
Sbjct: 265 NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVA 324

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
              F QM++ N ++WNAM+ G A++G   E + LF++M +  +  DS+T    + AC+  
Sbjct: 325 RSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQV 384

Query: 708 G 708
           G
Sbjct: 385 G 385



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/581 (21%), Positives = 240/581 (41%), Gaps = 101/581 (17%)

Query: 21  SSFTKDTYRNLPSFSLSLLPFLQKSH--FSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           S F    ++ L  +S   LP     +  +S     S + S+L H++    L      HA+
Sbjct: 37  SEFPATLFKFLNFYSSLPLPLDHSDYIPYSGFDFDSFFSSLLDHSVHKRHL---NQIHAQ 93

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA-HSGEGNA 137
           ++ S  +   FL    +      G + YAR++FD+ P+  +  WN+I+  Y+ H+  G+A
Sbjct: 94  LVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDA 153

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
                   ++  ++ S       TL  +LK C     +   + VHG   ++G   D FV 
Sbjct: 154 ------IEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQ 207

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             LV +Y+K G++ +A+ +F+G+ +R++V W  M+  Y +NG   E   +F  + +  + 
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267

Query: 258 PDDESVQCVLGVISDLGKRHE-EQVQAYAIKL-------LLYNNNS-------------- 295
           PD  ++  VL   +D+    + + +    +K+       LL +  +              
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327

Query: 296 -------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                  NV++WN  +SGY + G  + A+  F  MI  N++ DS+T   A+ A A   +L
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
           +L + +     K+ + + V V  +LI+M++K G V                         
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSV------------------------D 423

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L++++    +  D V                                    W+AMI GY 
Sbjct: 424 LAREVFDRTLDKDVV-----------------------------------VWSAMIVGYG 448

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           L      A++LF  M  +G   +++T    + AC    ++++G ++       G E    
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQ 508

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             + ++D+  + G + +A      +P  P    W  ++  C
Sbjct: 509 HYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGAC 549


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 238/825 (28%), Positives = 400/825 (48%), Gaps = 88/825 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L    +  DL  GK  H  +L +    +  +  +L+ MY +CG +  ARR+FDK+ 
Sbjct: 106 FVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLA 165

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +D++SW S++  Y        +   E   LF  +R S    +R+T A  +  C     +
Sbjct: 166 LQDVVSWTSMIMTYVQH-----DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESM 220

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +H   L+ G   D  VS A+VN+Y K G + +A+ +F+ M   + V W  ++ A 
Sbjct: 221 ADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAAC 280

Query: 236 AENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDLGKR------HEEQVQ-AYAIK 287
            ++G   E    F  +  + G+ PD  +   +L   S           HE  +Q  Y   
Sbjct: 281 TQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTH 340

Query: 288 LLLYN------------NNS----------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           L++ N            +N+          + + WN  +SG+ Q G    A+  F  M+ 
Sbjct: 341 LIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLA 400

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
             +  D  TF+   + + GT  +   + +    ++SG    V + ++LINM+S+ G V  
Sbjct: 401 EGITPDKFTFI---SIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVRE 457

Query: 384 ----------------------------------C-------GLRTDQFTLASVLRASSS 402
                                             C       GL  + FTL + L A +S
Sbjct: 458 ARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACAS 517

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L   K IH HAI+    A   V  ALI++Y + G + EA+ +F ++ G +L +WN 
Sbjct: 518 LT-ALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVF-HQCGKNLVSWNT 575

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +   Y+  +   +AL+LF  M   G + D+++  T +  C       +G+++H   +++G
Sbjct: 576 IAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSA---SEGRKIHNILLETG 632

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            E D  VS+ +L+MY    ++ +A  IF+ +   D V+W  MI+G  ++G    A+ ++ 
Sbjct: 633 MESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQ 692

Query: 583 QMRLSGVVPDEFTFAILVKA--SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           +M+L GV PD+ +F  ++ A   S  ++L+Q R +   +      +D  VG ++V M+ +
Sbjct: 693 RMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGR 752

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
            G + +A   F+++  R+   WN ++   AQHG  E+ LKLF  M+     PDS+T + V
Sbjct: 753 SGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSV 812

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS+ GL+ E Y +F  M  ++GI    EHY  +VD L RAGR  +A EL+  MP  A
Sbjct: 813 LSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPA 872

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           S  +   LL AC+VQGD +  K V E++M L+P   +AYV+LS++
Sbjct: 873 SYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLSSV 917



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 276/620 (44%), Gaps = 78/620 (12%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R T   LL LC     +     VH          D+ V  A +++Y K G + +A  +F 
Sbjct: 2   RGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQ 61

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGK 275
            +     V W  +L A+A +G  ++ F +F  +   GL PD  +   VL     I DL +
Sbjct: 62  SLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSR 121

Query: 276 RH-----------EEQVQAYAIKLLLYNNN---------------SNVVLWNKKLSGYLQ 309
                        E  V      + +Y                   +VV W   +  Y+Q
Sbjct: 122 GKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQ 181

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 A+E F  M  S V  + +T+  A++A A  +++  G+ IH   L+ GF S V+V
Sbjct: 182 HDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVV 241

Query: 370 GNSLINMYSKMG--------------------------------CV------------CG 385
             +++NMY K G                                CV             G
Sbjct: 242 SCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGG 301

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +  D+ T  ++L A SS P  L   + +H   ++        V   ++ +Y   G +  A
Sbjct: 302 ITPDKVTFITILNACSS-PATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              F      D  +WN +I G+  +    +A+ LF  M   G   D+ T  + +      
Sbjct: 361 AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA-- 418

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             +++ K +    ++SG ELD+ + S +++M+ + G + +A+S+F+D+   D V WT++I
Sbjct: 419 -RMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSII 477

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           S  V +G  D AL     MRL G++ ++FT    + A + LTAL +G+ IHA+ I+   +
Sbjct: 478 SSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFA 537

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           + P VG +L++MYAKCG +E+A  +F Q   +N V WN +     Q     E L+LF++M
Sbjct: 538 ASPAVGNALINMYAKCGCLEEADRVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEM 596

Query: 686 KAHGVEPDSVTFIGVLSACS 705
           +  G++ D V+F+ VL+ CS
Sbjct: 597 QLEGLKADKVSFVTVLNGCS 616



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 148/281 (52%), Gaps = 2/281 (0%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           + +G+ +H+    S F  D  V +  + MY KCG + DA S+F  +  P  V+W ++++ 
Sbjct: 18  IAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAA 77

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G+   A  I+ +M+L G+ PD  TF  ++   S +  L +G+ +H  +++     +
Sbjct: 78  FARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERN 137

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             VG SL+ MY KCG +EDA  +F ++ +++ V W +M++   QH    E L+LF  M+ 
Sbjct: 138 VMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRP 197

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            GV P+ +T+   +SAC++   +++  +  H    + G E +V     +V+  G+ G  +
Sbjct: 198 SGVLPNRITYATAISACAHVESMADG-KLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLE 256

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +A E+   MP   + S + A++ AC   G      W  +++
Sbjct: 257 DAREVFERMPHPNTVSWN-AIVAACTQHGCCVEALWYFQRM 296


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 223/702 (31%), Positives = 340/702 (48%), Gaps = 88/702 (12%)

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + G+ +VGD       F  +IR   + D+ T    + A     NL +G+ IH    K G 
Sbjct: 2   VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 61

Query: 364 YSAVIVGNSLINMYSKMGCV---------------------------CGLRTDQFTLASV 396
                V  +L++MY K   +                           CG   +   L   
Sbjct: 62  DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 121

Query: 397 LRASSSLPE---------------GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           +R    +P+                +H ++ I  +  +     D  + TA+ID+Y + G 
Sbjct: 122 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 181

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +  A  +F+  +  ++ +W+AMI  Y       KAL+LF  M +SG   D+IT+A+ + A
Sbjct: 182 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 241

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  L+ G+ +H    K G +LD  V + ++DMY KC  + DA+ +F+ +P  D V W
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T MI G  + G  + +L ++ +MR  GVVPD+     +V A + L A+ + R I   + +
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 361

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                D  +G +++DM+AKCG +E A  +F +M+ +N + W+AM+     HG G + L L
Sbjct: 362 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 421

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M   G+ P+ +T + +L ACS+ GLV E    F LM E Y +  +V+HY+ +VD LG
Sbjct: 422 FPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLG 481

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAGR  EA +LI SM  E    +  A LGACR   D    +  A  L+ L+P +   Y+L
Sbjct: 482 RAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYIL 541

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI+A A +W+DV   R  M ++ +KK P                       +  I+  
Sbjct: 542 LSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEM 601

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           ++ L  +++  GYVPDT+FVL DV+EE K   LY HSEKLA A+GLI+TP  + I   K 
Sbjct: 602 LKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKN 661

Query: 899 PLY-----------------------ANRFHHLRDGMCPCAD 917
                                     ANRFHH ++G C C D
Sbjct: 662 LRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGD 703



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 156/297 (52%), Gaps = 5/297 (1%)

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           M+ G+    +       F  +   G R D  T+   ++AC  L  L+ G+ +H    K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            +LD  V + ++DMYVKC  + DA+ +F+ +   D V WT MI G  + G+ + +L ++ 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +MR  GVVPD+     +V A + L A+ + R I   + +     D  +G +++DMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            +E A  +F +M+ +N + W+AM+     HG G + L LF  M + G+ PD +T   +L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHY--SFLVDALGRAGRTKEAGELILSMP 757
           ACS    +       H++  K+G+  +++H+  + LVD  G+    ++A  L   MP
Sbjct: 241 ACSDLKNLQMGRLIHHIVY-KFGL--DLDHFVCAALVDMYGKCREIEDARFLFDKMP 294



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 212/514 (41%), Gaps = 84/514 (16%)

Query: 135 GNAENVTEGFRLFRSLRESITFTSR---LTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           G    V +    F + RE I   +R    TL  +++ C     +     +H    K GL 
Sbjct: 3   GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 62

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV  ALV++Y K  +I +A+FLFD MQERD+V W VM+  YAE G   E   LF  +
Sbjct: 63  LDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 122

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQV-------QAYAIKLLLYN------------ 292
              G+ PD  ++  V+   + LG  H+ ++       + + + ++L              
Sbjct: 123 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 182

Query: 293 ----------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        NV+ W+  ++ Y   G    A++ F  M+ S +  D +T    L A 
Sbjct: 183 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 242

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
           +   NL +G+ IH    K G      V  +L++MY K   +                   
Sbjct: 243 SDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWT 302

Query: 384 --------CGLRTDQFTLASVLRASSSLPE---------------GLHLSKQIHVHAIKN 420
                   CG   +   L   +R    +P+                +H ++ I  +  + 
Sbjct: 303 VMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK 362

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               D  + TA+ID++ + G +  A  +F+  +  ++ +W+AMI  Y       KAL+LF
Sbjct: 363 KFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 422

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILD 535
             M  SG   ++IT+ + + AC    ++++G +  +     Y++++  +   CV    +D
Sbjct: 423 PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV----VD 478

Query: 536 MYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
           +  + G + +A  +   +    D+  W   +  C
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 512



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 146/307 (47%), Gaps = 39/307 (12%)

Query: 71  LGKSTHARILNSSQIPDRF-----LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           LG    ARI++      +F     L   ++ MY++CG +  AR +FD+M ++++ISW+++
Sbjct: 144 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 203

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +AAY + G+G      +   LFR +  S     ++TLA LL  C     +     +H   
Sbjct: 204 IAAYGYHGQGR-----KALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIV 258

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            K GL  D FV  ALV++Y K  +I +A+FLFD M ERD+V W VM+  YAE G   E  
Sbjct: 259 YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESL 318

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-------QVQAYAIKLLLYN------ 292
            LF  +   G+ PD  ++  V+   + LG  H+        Q + + + ++L        
Sbjct: 319 VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 378

Query: 293 ----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                              NV+ W+  ++ Y   G    A++ F  M+RS +  + +T +
Sbjct: 379 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLV 438

Query: 337 VALAAVA 343
             L A +
Sbjct: 439 SLLYACS 445



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 159/354 (44%), Gaps = 34/354 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           ++R      +L +G+  H  +       D F+   L+ MY +C  +  AR LFDKM +RD
Sbjct: 36  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 95

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L++W  ++  YA  G+ N     E   LF  +RE      ++ +  ++  C   G +  +
Sbjct: 96  LVTWTVMIGGYAECGKAN-----ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 150

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +  Y  +     D  +  A++++Y+K G +  A+ +FD M+E++V+ W  M+ AY  +
Sbjct: 151 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 210

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKL----- 288
           G G +   LF  +  SG+ PD  ++  +L   SDL     G+     V  + + L     
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270

Query: 289 -----------------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                             L++     ++V W   + GY + G+ + ++  F  M    V 
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            D V  +  + A A    ++  + I     +  F   VI+G ++I+M++K GCV
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 384



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       +L +G+  H  +       D F+   L+ MY +C  +  AR LFDKMP+R
Sbjct: 237 SLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER 296

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL++W  ++  YA  G  N     E   LF  +RE      ++ +  ++  C   G +  
Sbjct: 297 DLVTWTVMIGGYAECGNAN-----ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHK 351

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + T+  Y  +     D  +  A++++++K G +  A+ +FD M+E++V+ W  M+ AY  
Sbjct: 352 ARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY 411

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G G +   LF  + RSG+ P+  ++  +L   S  G
Sbjct: 412 HGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 448


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  362 bits (929), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 211/593 (35%), Positives = 325/593 (54%), Gaps = 53/593 (8%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL-HLSKQIHVHAIKNDT-VADSFVSTA 431
           I++Y +M    G+  D+FT +SV +A S L  GL H  ++ H  ++     V++ FV +A
Sbjct: 161 IDIYQRM-VPDGILPDEFTFSSVFKAFSDL--GLVHEGQRAHGQSVVLGVGVSNVFVGSA 217

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y + G M +A  + +   G D+  + A+I GY       ++L++F +M   G   +
Sbjct: 218 LVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEAN 277

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E T+++ +  CG L  L  G+ +H   +K+G E  +   + +L MY +CG + D+  +F 
Sbjct: 278 EYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFK 337

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
               P+ V WT++I G V NG E++AL  + QM  S + P+ FT + +++A S L  LEQ
Sbjct: 338 QFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQ 397

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA ++K     D +VG +L+D Y KCG+ E A  +F  +   + V  N+M+   AQ
Sbjct: 398 GKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQ 457

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +G G E L+LF  MK  G+EP++VT++GVLSAC+  GL+ E    F   R    IE   +
Sbjct: 458 NGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKD 517

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGRAGR KEA E++++    +   + R LL ACR+ GD E  K V  +++ L
Sbjct: 518 HYACMVDLLGRAGRLKEA-EMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDL 576

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----DL------------- 834
            P D   +VLLSN++A+   W  V   +  M+   +KK+PA    D+             
Sbjct: 577 APEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWS 636

Query: 835 ------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 I  K+E LI+++KE GYVPDT FVL D++EE+K R+LYYHSEKLA A+ L  + 
Sbjct: 637 HPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSN 696

Query: 889 PSSVILSNKEPLY------------------------ANRFHHLRDGMCPCAD 917
             +  +   + L                           RFHH R+G+C C D
Sbjct: 697 YKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGD 749



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 239/535 (44%), Gaps = 97/535 (18%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L+  Y +CGS+VYAR++FD++P R +++WNS++A+Y  +G        E   +++ 
Sbjct: 112 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSK-----EAIDIYQR 166

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVNIYSKFG 208
           +          T + + K     G V   +  HG ++ +G+ V + FV  ALV++Y+KFG
Sbjct: 167 MVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG 226

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL- 267
           K+R+A+ + D +  +DVVL+  ++  Y+ +G   E   +F ++ + G+  ++ ++  VL 
Sbjct: 227 KMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLV 286

Query: 268 --GVISDLGKRH-----------EEQVQAYAIKLLLYNN---------------NSNVVL 299
             G + DL               E  V +    L +Y                 N N V 
Sbjct: 287 CCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVT 346

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W   + G +Q G    A+  F  M+RS++  +S T    L A +    L  G+QIH   +
Sbjct: 347 WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVM 406

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
           K G      VG +LI+ Y K G                  + S+  GL          ++
Sbjct: 407 KFGLDIDKYVGAALIDFYGKCGST--------------EIARSVFNGL----------LE 442

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
            D V+      ++I  Y +NG                        FG       H+AL+L
Sbjct: 443 VDVVS----VNSMIYSYAQNG------------------------FG-------HEALQL 467

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYV 538
           FS M  +G   + +T    + AC    +L++G  + + A  SG  EL     + ++D+  
Sbjct: 468 FSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLG 527

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           + G + +A+ + N +   D V W T++S C  +G+ ++A  + +  R+  + P++
Sbjct: 528 RAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMN--RVIDLAPED 580



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 5/207 (2%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+  H  I+ +          +L+TMY RCG +  + ++F +  + + ++W S++ 
Sbjct: 293 DLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
               +G    E     FR  + LR SIT  S  TL+ +L+ C S   +   + +H   +K
Sbjct: 353 GLVQNGR--EEIALLKFR--QMLRSSITPNS-FTLSSVLRACSSLAMLEQGKQIHAIVMK 407

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            GL  D++V  AL++ Y K G    A+ +F+G+ E DVV    M+ +YA+NGFG E   L
Sbjct: 408 FGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQL 467

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG 274
           F  +  +GL P++ +   VL   ++ G
Sbjct: 468 FSGMKDTGLEPNNVTWLGVLSACNNAG 494



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 120/241 (49%), Gaps = 24/241 (9%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           ++LL F Q    S + +S    S+LR   S + L  GK  HA ++      D+++   L+
Sbjct: 362 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 421

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
             Y +CGS   AR +F+ + + D++S NS++ +YA +G G+     E  +LF  ++++  
Sbjct: 422 DFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGH-----EALQLFSGMKDTGL 476

Query: 156 FTSRLTLAPLLKLCLSSG------YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             + +T   +L  C ++G      ++++S    G    I L  D +    +V++  + G+
Sbjct: 477 EPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSG---NIELTKDHY--ACMVDLLGRAGR 531

Query: 210 IREAKFLFDGMQERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           ++EA+ L + +   DVV+W+ +L   R + +    + V +  +D     L P+D     +
Sbjct: 532 LKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID-----LAPEDGGTHVL 586

Query: 267 L 267
           L
Sbjct: 587 L 587



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 38/329 (11%)

Query: 67  SDLLL---GKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
           SDL L   G+  H + ++    + + F+ + L+ MY++ G +  AR + D++  +D++ +
Sbjct: 187 SDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLF 246

Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
            +++  Y+H GE       E  ++FR++ +     +  TL+ +L  C +   + +   +H
Sbjct: 247 TALIVGYSHHGEDG-----ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIH 301

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
           G  +K GL        +L+ +Y + G + ++  +F      + V W  ++    +NG  E
Sbjct: 302 GLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREE 361

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLL----------- 290
                F  + RS + P+  ++  VL   S L    + +Q+ A  +K  L           
Sbjct: 362 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 421

Query: 291 ---------------YNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                          +N     +VV  N  +  Y Q G  H A++ F  M  + ++ ++V
Sbjct: 422 DFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNV 481

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
           T+L  L+A      L  G  I  +   SG
Sbjct: 482 TWLGVLSACNNAGLLEEGCHIFSSARNSG 510


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  362 bits (929), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 214/702 (30%), Positives = 353/702 (50%), Gaps = 90/702 (12%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W   +  Y   G  H ++  F+ M+ S +  D   F   L A A   +LNLG+ +HG  +
Sbjct: 76  WKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYII 135

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI- 418
           + G    +  GN+L+NMYSK      LR  + +    L AS  L E    ++ +   ++ 
Sbjct: 136 RVGLDFDLYTGNALMNMYSK------LRFLKKSGRQRLGASQVLDEMTERTRSVRTASVL 189

Query: 419 -KNDTVADSFVSTALIDVYCRN----GSMAEAEY-------------------------- 447
             N     S +     DV CR+      + E +Y                          
Sbjct: 190 VGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMS 249

Query: 448 ------LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
                 +FE     DL +WN +I G   +    + L +   M  +  + D  T+++ +  
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
               + + +GK++H  +++ G + ++ V+S ++DMY KC  +VD+  +F  +   D ++W
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            ++I+GCV NG  D  L  + QM ++ + P  ++F+ ++ A + LT L  G+Q+H  + +
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                + F+  SLVDMYAKCGNI  A  +F +M +R+ V W AM++G A HG+  + ++L
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE MK  G+EP+ V F+ VL+ACS+ GLV EA++ F+ M   +GI P VEHY+ + D LG
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAGR +EA + I  MP   + S+   LL ACRV  + +  + VA +++ ++P ++ AY+L
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           L+NI++AA +W +    R  ++R  ++K PA                       + I   
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREA 669

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           +E L++ +++ GYVPDT  V  DVEEE+K+  +  HSE+LA  +G+I+TP  + I   K 
Sbjct: 670 MEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKN 729

Query: 899 PLYA-----------------------NRFHHLRDGMCPCAD 917
                                      +RFHH ++G C C D
Sbjct: 730 LRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGD 771



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 133/612 (21%), Positives = 256/612 (41%), Gaps = 93/612 (15%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           S +S+ +   S+LR+ +S       +  HA++L   Q       + L+++YS    L  +
Sbjct: 3   SPTSTEALVNSLLRNPLSIKSRSQAQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDS 61

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK 167
            RLF+ +     ++W S++  Y   G  +     +    F  +  S  +        +LK
Sbjct: 62  LRLFNTLHFPPALAWKSVIRCYTSHGLPH-----KSLGSFIGMLASGLYPDHNVFPSVLK 116

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE-------AKFLFDGM 220
            C     +   E++HGY +++GL +D +   AL+N+YSK   +++       A  + D M
Sbjct: 117 ACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEM 176

Query: 221 QE--RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV--------- 269
            E  R V    V++          E F+  V       C   E    VL +         
Sbjct: 177 TERTRSVRTASVLVGNQGRKVSDIEAFNYDVS------CRSREFEAQVLEIDYKPRSEYR 230

Query: 270 ---ISDLGKRHEEQVQAYAI----KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                +LG++ ++   + ++    K+       ++V WN  ++G  + G     +     
Sbjct: 231 EMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVRE 290

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--- 379
           M  +N++ DS T    L  +A   +++ G++IHG +++ G  + V V +SLI+MY+K   
Sbjct: 291 MGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTR 350

Query: 380 -----------------------MGCV-----------------CGLRTDQFTLASVLRA 399
                                   GCV                   ++   ++ +S++ A
Sbjct: 351 VVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPA 410

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            + L   LHL KQ+H +  +N    + F++++L+D+Y + G++  A  +F+     D+ +
Sbjct: 411 CAHLTT-LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS 469

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W AMI G  L  ++  A+ELF  M T G   + +     + AC        G    A+  
Sbjct: 470 WTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACS-----HAGLVDEAWKY 524

Query: 520 KSGFELDLCVSSG------ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
            +   LD  ++ G      + D+  + G + +A      +P  P    W T++S C  + 
Sbjct: 525 FNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHK 584

Query: 573 EEDLALSIYHQM 584
             D+A  + +++
Sbjct: 585 NVDMAEKVANRI 596



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 3/132 (2%)

Query: 510 QGKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           Q +Q+HA  +K  F+   LC  S +L +Y     + D+  +FN +  P  +AW ++I   
Sbjct: 26  QAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCY 83

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G    +L  +  M  SG+ PD   F  ++KA + L  L  G  +H  +I++    D 
Sbjct: 84  TSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDL 143

Query: 629 FVGISLVDMYAK 640
           + G +L++MY+K
Sbjct: 144 YTGNALMNMYSK 155



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L++    + +  Q +Q+HA ++K   +S       L+ +Y+    + D+  LF  +    
Sbjct: 14  LLRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPP 72

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            + W +++     HG   ++L  F  M A G+ PD   F  VL AC+
Sbjct: 73  ALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  362 bits (929), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 246/826 (29%), Positives = 383/826 (46%), Gaps = 142/826 (17%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  VH + L  G   + F+   L+NIY K   I  A+ LFD + + D+V    +L AY+ 
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +G  +    LF                                    A  L +     + 
Sbjct: 84  SGNVKLAQQLF-----------------------------------NATPLTI----RDT 104

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-GTDNLNLGQQIHG 356
           V +N  ++ Y    D H A+  FV M R     D  TF   L+A++   D     Q +H 
Sbjct: 105 VSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHC 164

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
             +K G      V N+L++ Y     VC         +S L  SS L   +  ++++   
Sbjct: 165 EVIKLGTLLIPSVTNALLSCY-----VC-------CASSPLVKSSQL---MASARKVFDE 209

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             KN     S+  T +I  Y RN  +  A  L +         WNAMI GY+      +A
Sbjct: 210 TPKNQIYEPSW--TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEA 267

Query: 477 LELFSHMHTSGERLDEITIATAVKACGC----LLMLKQGKQMHAYAMKSGFE----LDLC 528
            + F  MH+ G + DE T  + + ACG     + M   G+Q+H Y +++  E      L 
Sbjct: 268 FDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLS 327

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW--------------------------- 561
           V++ ++  Y K   M++A+ +F+ +P  D ++W                           
Sbjct: 328 VNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERN 387

Query: 562 ----TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
               T MISG   NG  +  L +++QM+  G+ P ++ FA  + A S L +L+ G+QIH+
Sbjct: 388 VLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHS 447

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +I+L   S    G +L+ MY++CG +E A  +F  M   ++V WNAM+  LAQHG+G +
Sbjct: 448 QVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVK 507

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            ++LFE M    + PD +TF+ +L+AC++ GL+ E    F  M  +YGI P  +HY+ L+
Sbjct: 508 AIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLI 567

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D L RAG   +A  +I SMPFEA A +  ALL  CR+ G+ E G   A++L+ L P    
Sbjct: 568 DLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDG 627

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
            Y++LSN++AA  QWD+V   R  M+ + VKK+P                          
Sbjct: 628 TYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQA 687

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           ++  ++ L+  +K+ GYVPDT FVL D+E E KE +L  HSEKLA  YG++  P  + I 
Sbjct: 688 VYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIR 747

Query: 894 --------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                               +  +E +  +  RFHH ++G C C +
Sbjct: 748 VFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGN 793



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 209/524 (39%), Gaps = 114/524 (21%)

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
           + + +H   L SGF     + N LIN+Y K                    SS++     L
Sbjct: 23  IARAVHAHILTSGFKPNTFILNRLINIYCK--------------------SSNITYARKL 62

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF--DLATWNAMIFGY 467
             +I     K D VA     T L+  Y  +G++  A+ LF        D  ++NAMI  Y
Sbjct: 63  FDKIP----KPDIVA----RTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAY 114

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELD 526
              N+ H AL LF  M   G   D  T ++ + A   +   ++  QM H   +K G  L 
Sbjct: 115 SHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLI 174

Query: 527 LCVSSGILDMYVKCGA---------MVDAQSIFNDIPA---------------------- 555
             V++ +L  YV C +         M  A+ +F++ P                       
Sbjct: 175 PSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLV 234

Query: 556 -----------PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA-S 603
                      P DVAW  MISG V  G  + A   + +M   G+  DE+T+  L+ A  
Sbjct: 235 AARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACG 294

Query: 604 SC---LTALEQGRQIHANLIKLDCS-SDPF---VGISLVDMYAK---------------- 640
           SC   +     GRQ+H  +++     S  F   V  +L+  Y K                
Sbjct: 295 SCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPV 354

Query: 641 ---------------CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
                             IE+A  +F +M  RN + W  M+ GLAQ+G GEE LKLF  M
Sbjct: 355 RDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQM 414

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           K+ G+EP    F G ++ACS  G +    +  H    + G +  +   + L+    R G 
Sbjct: 415 KSEGLEPCDYAFAGAITACSVLGSLDNG-QQIHSQVIRLGHDSGLSAGNALITMYSRCGV 473

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            + A  + L+MP+  S S + A++ A    G       + E++M
Sbjct: 474 VESAESVFLTMPYVDSVSWN-AMIAALAQHGHGVKAIELFEQMM 516



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 147/698 (21%), Positives = 248/698 (35%), Gaps = 227/698 (32%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           ++ + L H  +T   ++ ++ HA IL S   P+ F+ N L+ +Y +  ++ YAR+LFDK+
Sbjct: 9   RYLTQLNHVSTTQ--IIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKI 66

Query: 115 PD---------------------------------RDLISWNSILAAYAHSGEGNAE-NV 140
           P                                  RD +S+N+++ AY+H  +G+A  N+
Sbjct: 67  PKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNL 126

Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
               + +  L +  TF+S L+      L L +      + +H   +K+G +    V+ AL
Sbjct: 127 FVQMKRYGFLPDPFTFSSVLS-----ALSLIADEERHCQMLHCEVIKLGTLLIPSVTNAL 181

Query: 201 VNIY-----------SKF--------------------------GKIRE-----AKFLFD 218
           ++ Y           S+                           G +R      A+ L D
Sbjct: 182 LSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLD 241

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           G+     V W  M+  Y   G  EE F  F  +H  G+  D+ +      +IS  G  +E
Sbjct: 242 GLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYT---SLISACGSCNE 298

Query: 279 E--------QVQAYAIK--------LLLYNNNS------------------------NVV 298
           +        QV  Y ++         +L  NN+                        +++
Sbjct: 299 KMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDII 358

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV------------------------- 333
            WN  LSGY+       A   F  M   NV   +V                         
Sbjct: 359 SWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEG 418

Query: 334 ------TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
                  F  A+ A +   +L+ GQQIH   ++ G  S +  GN+LI MYS+ G V    
Sbjct: 419 LEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAE 478

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           +   T+  V                            DS    A+I    ++G   +A  
Sbjct: 479 SVFLTMPYV----------------------------DSVSWNAMIAALAQHGHGVKAIE 510

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LFE     D+                                 D IT  T + AC    +
Sbjct: 511 LFEQMMKEDILP-------------------------------DRITFLTILTACNHAGL 539

Query: 508 LKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP----APDDVAWT 562
           +K+G+        + G        + ++D+  + G  + AQS+   +P    AP    W 
Sbjct: 540 IKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAP---IWE 596

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAIL 599
            +++GC  +G  ++ L I    RL  ++P  + T+ IL
Sbjct: 597 ALLAGCRIHG--NMELGIQAADRLLELIPGQDGTYIIL 632



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 39/279 (13%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           DT+R + S  +    +   S  S+  S ++   +            G+  H  IL +   
Sbjct: 269 DTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFN---------CGRQVHGYILRTVVE 319

Query: 86  PDRF----LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG---EGNA- 137
           P       + N L+T Y++   ++ ARR+FDKMP RD+ISWN++L+ Y ++    E N+ 
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSI 379

Query: 138 ------ENV----------------TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
                  NV                 EG +LF  ++           A  +  C   G +
Sbjct: 380 FSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSL 439

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +H   +++G         AL+ +YS+ G +  A+ +F  M   D V W  M+ A 
Sbjct: 440 DNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAAL 499

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           A++G G +   LF  + +  + PD  +   +L   +  G
Sbjct: 500 AQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAG 538


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  362 bits (928), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 206/584 (35%), Positives = 320/584 (54%), Gaps = 55/584 (9%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI-DVYCRNGSM 442
           CG    + TL S +    +    L   + IH H I++ T  D  V    I ++Y + GS+
Sbjct: 98  CGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            EA+ LF+     D+ +W  +I GY  S  + +AL LF  M   G + +E T+++ +KA 
Sbjct: 157 EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKAS 216

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           G       G+Q+HA+++K G+++++ V S +LDMY +   M +A+ IFN + A + V+W 
Sbjct: 217 GTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWN 276

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            +I+G    GE +  + ++ QM   G  P  FT++ +  A +   +LEQG+ +HA++IK 
Sbjct: 277 ALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKS 336

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
                 ++G +L+DMYAK G+I+DA  +F+++  ++ V WN+++ G AQHG G E L+LF
Sbjct: 337 GGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLF 396

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           E M    V+P+ +TF+ VL+ACS++GL+ E    F LM+ K+ IE +V H+  +VD LGR
Sbjct: 397 EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGR 455

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AGR  EA + I  MP + +A++  ALLG+CR+  + + G + AE++  L+P DS  +VLL
Sbjct: 456 AGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 515

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------------DLIF 836
           SNI+A+A +  D    R  MK   VKK+PA                            ++
Sbjct: 516 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 575

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSN 896
            K+ G   +IKE GYVPDT  VL  + ++++E  L YHSEKLA A+ ++ TPP   I   
Sbjct: 576 EKISG---KIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIK 632

Query: 897 KEPLY-----------------------ANRFHHLRDGMCPCAD 917
           K                            NRFHH   GMC C D
Sbjct: 633 KNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRD 676



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 153/310 (49%), Gaps = 34/310 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G++ HA I +S+   D  L N ++ MY++CGSL  A+ LFDKMP +D++SW  +++ Y+ 
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQ 183

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           SG+      +E   LF  +       +  TL+ LLK   +         +H ++LK G  
Sbjct: 184 SGQA-----SEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V  +L+++Y+++  +REAK +F+ +  ++VV W  ++  +A  G GE V  LF+ +
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM 298

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK----LLLYNNNS----------- 295
            R G  P   +   V    +  G   + + V A+ IK     + Y  N+           
Sbjct: 299 LRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 358

Query: 296 -------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        ++V WN  +SGY Q G    A++ F  M+++ VQ + +TFL  L A 
Sbjct: 359 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 418

Query: 343 AGTDNLNLGQ 352
           + +  L+ GQ
Sbjct: 419 SHSGLLDEGQ 428



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/416 (21%), Positives = 168/416 (40%), Gaps = 91/416 (21%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           ++N+Y+K G + EA+ LFD M  +D+V W V++  Y+++G   E   LF  +   G  P+
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205

Query: 260 DESVQCVLGVISDLGK--RHEEQVQAYAIKL--------------------------LLY 291
           + ++  +L   S  G    H  Q+ A+++K                           +++
Sbjct: 206 EFTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIF 264

Query: 292 NN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           N+    NVV WN  ++G+ + G+    +  F+ M+R   +    T+     A A + +L 
Sbjct: 265 NSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLE 324

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
            G+ +H   +KSG      +GN+LI+MY+K G +                          
Sbjct: 325 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD------------------------ 360

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K++    +K D V+      ++I  Y ++G  AE                         
Sbjct: 361 AKKVFRRLVKQDIVS----WNSIISGYAQHGLGAE------------------------- 391

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                 AL+LF  M  +  + +EIT  + + AC    +L +G+       K   E  +  
Sbjct: 392 ------ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 445

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
              ++D+  + G + +A     ++P  P    W  ++  C  +   DL +    Q+
Sbjct: 446 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQI 501



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 22/242 (9%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
            + +HF+ SS       +     S+  L  GK  HA ++ S   P  ++ N L+ MY++ 
Sbjct: 303 FEPTHFTYSS-------VFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 355

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           GS+  A+++F ++  +D++SWNSI++ YA  G G      E  +LF  + ++    + +T
Sbjct: 356 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLG-----AEALQLFEQMLKAKVQPNEIT 410

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGM 220
              +L  C  SG +   +       K  +         +V++  + G++ EA KF+ +  
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 470

Query: 221 QERDVVLWKVML---RAYAENGFG----EEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
            +    +W  +L   R +     G    E++F L  D H SG      ++    G +SD 
Sbjct: 471 IKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFEL--DPHDSGPHVLLSNIYASAGRLSDA 528

Query: 274 GK 275
            K
Sbjct: 529 AK 530


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  362 bits (928), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 243/776 (31%), Positives = 365/776 (47%), Gaps = 148/776 (19%)

Query: 283 AYAIKLL--LYNNNSNVVLWNKKLSGYLQVGDNHGAIEC---FVNMIRSNVQYDSVTFLV 337
           ++A+ LL     +++ V  WN  +  Y   GDN  A +C   F  M   +   D+ TF  
Sbjct: 76  SHAVSLLRRFPPSDAGVYHWNSLIRSY---GDNGCANKCLYLFGLMHSLSWTPDNYTFPF 132

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------ 379
              A     ++  G+  H  +L +GF S V VGN+L+ MYS+                  
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192

Query: 380 --------------------------MGCVCGLRTDQFTLASVLRASSSLPEGLH-LSKQ 412
                                     M    G R D  TL +VL   +SL  G H L KQ
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL--GTHSLGKQ 250

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H  A+ ++ + + FV   L+D+Y + G M EA  +F N    D+ +WNAM+ GY     
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310

Query: 473 SHKALELFSHMH-----------------------------------TSGERLDEITIAT 497
              A+ LF  M                                    +SG + +E+T+ +
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFEL-------DLCVSSGILDMYVKCGAMVDAQSIF 550
            +  C  +  L  GK++H YA+K   +L       +  V + ++DMY KC  +  A+++F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430

Query: 551 NDIPAP--DDVAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKASSCL 606
           + +     D V WT MI G   +G+ + AL +  +M        P+ FT +  + A + L
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490

Query: 607 TALEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
            AL  G+QIHA  ++   ++ P FV   L+DMYAKCG+I DA ++F  M  +N V W ++
Sbjct: 491 AALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSL 550

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G   HG GEE L +F++M+  G + D VT + VL ACS++G++ +  E F+ M+  +G
Sbjct: 551 MTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFG 610

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           + P  EHY+ LVD LGRAGR   A  LI  MP E    +  A L  CR+ G  E G++ A
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAA 670

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
           EK+  L      +Y LLSN++A A +W DVT  R  M+ K VKK P              
Sbjct: 671 EKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTF 730

Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAY 882
                    A  I+  +   ++RIK+ GYVP+T F L DV++EEK+  L+ HSEKLA AY
Sbjct: 731 FVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAY 790

Query: 883 GLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           G+++TP  + I   K                           ++RFHH ++G C C
Sbjct: 791 GILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 180/635 (28%), Positives = 300/635 (47%), Gaps = 79/635 (12%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRD--LISWNSILAAYAHSGEGNAENVTEGFRLF 147
           LT++L++ Y   G L +A  L  + P  D  +  WNS++ +Y  +G  N     +   LF
Sbjct: 61  LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN-----KCLYLF 115

Query: 148 RSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
             L  S+++T    T   + K C     V   E+ H  +L  G + + FV  ALV +YS+
Sbjct: 116 -GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-PDDESVQC 265
              + +A+ +FD M   DVV W  ++ +YA+ G  +    +F  +     C PD+ ++  
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234

Query: 266 VLGVISDLGKRH-EEQVQAYAIKLLLYNNN----------------------------SN 296
           VL   + LG     +Q+  +A+   +  N                              +
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VV WN  ++GY Q+G    A+  F  M    ++ D VT+    AA++G     LG     
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW---SAAISGYAQRGLG----- 346

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                  Y A+ V   +++         G++ ++ TL SVL   +S+   +H  K+IH +
Sbjct: 347 -------YEALGVCRQMLS--------SGIKPNEVTLISVLSGCASVGALMH-GKEIHCY 390

Query: 417 AI-------KNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFDLATWNAMIFGY 467
           AI       KN    ++ V   LID+Y +   +  A  +F+  +    D+ TW  MI GY
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450

Query: 468 ILSNNSHKALELFSHM--HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE- 524
               +++KALEL S M       R +  TI+ A+ AC  L  L+ GKQ+HAYA+++    
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           + L VS+ ++DMY KCG++ DA+ +F+++ A ++V WT++++G   +G  + AL I+ +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGISLVDMYAKCG 642
           R  G   D  T  +++ A S    ++QG + + N +K     S  P     LVD+  + G
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGME-YFNRMKTVFGVSPGPEHYACLVDLLGRAG 629

Query: 643 NIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            +  A  L ++M M    V+W A L     HG  E
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 252/573 (43%), Gaps = 109/573 (19%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S +  G+S HA  L +  I + F+ N L+ MYSRC SL  AR++FD+M   D++SWNSI+
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200

Query: 127 AAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
            +YA  G+           +F R   E       +TL  +L  C S G     + +H +A
Sbjct: 201 ESYAKLGKPKV-----ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +   ++ + FV   LV++Y+K G + EA  +F  M  +DVV W  M+  Y++ G  E+  
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LF                              E++Q   IK+       +VV W+  +S
Sbjct: 316 RLF------------------------------EKMQEEKIKM-------DVVTWSAAIS 338

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL------ 359
           GY Q G  + A+     M+ S ++ + VT +  L+  A    L  G++IH   +      
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398

Query: 360 -KSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
            K+G     +V N LI+MY+K   V                                   
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458

Query: 384 ------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS-FVST 430
                       C  R + FT++  L A +SL   L + KQIH +A++N   A   FVS 
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASL-AALRIGKQIHAYALRNQQNAVPLFVSN 517

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            LID+Y + GS+++A  +F+N    +  TW +++ GY +     +AL +F  M   G +L
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577

Query: 491 DEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
           D +T+   + AC    M+ QG     +    + +  G E   C    ++D+  + G +  
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC----LVDLLGRAGRLNA 633

Query: 546 AQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           A  +  ++P  P  V W   +S C  +G+ +L 
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 159/306 (51%), Gaps = 8/306 (2%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLAT--WNAMIFGYILSNNSHKALELFSHMHT 485
           +++ LI  Y   G ++ A  L       D     WN++I  Y  +  ++K L LF  MH+
Sbjct: 61  LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
                D  T     KACG +  ++ G+  HA ++ +GF  ++ V + ++ MY +C ++ D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASS 604
           A+ +F+++   D V+W ++I      G+  +AL ++ +M    G  PD  T   ++   +
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L     G+Q+H   +  +   + FVG  LVDMYAKCG +++A  +F  M +++ V WNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE-- 722
           M+ G +Q G  E+ ++LFE M+   ++ D VT+   +S  +  GL    YE   + R+  
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL---GYEALGVCRQML 357

Query: 723 KYGIEP 728
             GI+P
Sbjct: 358 SSGIKP 363


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  362 bits (928), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 225/682 (32%), Positives = 347/682 (50%), Gaps = 76/682 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A++ +V MI   +  +S TF   L + A
Sbjct: 86  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 145

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK G+   + V  SLI++Y + G                      
Sbjct: 146 KSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNG---------------------- 183

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  ++++   +   D V+     TALI  Y   G +  A+ LF+     D+ +WNAM
Sbjct: 184 --RLEDARKVFDRSPHRDVVS----YTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAM 237

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  + N  +ALELF  M  +  R DE T+ T V AC     ++ G+Q+H++    GF
Sbjct: 238 ISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGF 297

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y KCG +  A  +F  +   D ++W T+I G         AL ++ +
Sbjct: 298 GSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQE 357

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAKC 641
           M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAKC
Sbjct: 358 MLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKC 417

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+IE A+ +F  +  ++   WNAM+ G A HG  +    +F  M+  G+EPD +TF+G+L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLL 477

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS +G++      F  M + Y I P++EHY  ++D LG +G  KEA E+I +M  E  
Sbjct: 478 SACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPD 537

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             +  +LL AC+++G+ E G+  A+ L+ +EP +   YVLLSNI+A A +W++V   R  
Sbjct: 538 GVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRAL 597

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           +  K +KK P                          I+  +E +   +++ G+VPDT  V
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------KE 898
           L ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K 
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 717

Query: 899 PLYA---NRFHHLRDGMCPCAD 917
            + A    RFHH RDG+C C D
Sbjct: 718 EIIARDRTRFHHFRDGVCSCND 739



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 255/595 (42%), Gaps = 114/595 (19%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN---------LMT 96
           HF  SSS   + S+  H  S S L   K+  +  L  +Q+    L N          L  
Sbjct: 18  HFLPSSSDPPYDSLRNHP-SLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCV 76

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           +      L YA  +F+ + + +L+ WN++   +A S +          +L+  +      
Sbjct: 77  ISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP-----VSALKLYVCMISLGLL 131

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            +  T   LLK C  S      + +HG+ LK+G   D FV  +L+++Y + G++ +A+ +
Sbjct: 132 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKV 191

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD    RDVV +  +++ YA  G+ E    LF          D+  V+            
Sbjct: 192 FDRSPHRDVVSYTALIKGYASRGYIESAQKLF----------DEIPVK------------ 229

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                              +VV WN  +SGY + G+   A+E F  M+++N++ D  T +
Sbjct: 230 -------------------DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMV 270

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---CVCGL------- 386
             ++A A + ++ LG+Q+H      GF S + + NSL+++YSK G     CGL       
Sbjct: 271 TVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK 330

Query: 387 ---------------------------------RTDQFTLASVLRASSSLPEGLHLSKQI 413
                                            R +  T+ S+L A + L   + + + I
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHL-GAIDIGRWI 389

Query: 414 HVHA---IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           HV+    +K+ T A S + T+LID+Y + G +  A  +F +     L++WNAMIFG+ + 
Sbjct: 390 HVYIDKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFEL 525
             +  A ++FS M   G   D+IT    + AC    ML  G+ +       Y +    E 
Sbjct: 449 GRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEH 508

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
             C    ++D+    G   +A+ + N++   PD V W +++  C   G  +L  S
Sbjct: 509 YGC----MIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGES 559



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 34/334 (10%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY---LFENKDGFDLATWNAMIFGY 467
           + IH   IK      ++  + L+++   +       Y   +FE     +L  WN M  G+
Sbjct: 50  RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            LS++   AL+L+  M + G   +  T    +K+C      K+G+Q+H + +K G++LDL
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169

Query: 528 CVSSGILDMYVKCGAMVD-------------------------------AQSIFNDIPAP 556
            V + ++ +YV+ G + D                               AQ +F++IP  
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W  MISG  + G    AL ++ +M  + + PDE T   +V A +   ++E GRQ+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           + +      S+  +  SL+D+Y+KCG +E A  LF+ +  ++ + WN ++ G       +
Sbjct: 290 SWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYK 349

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           E L LF++M   G  P+ VT + +L AC++ G +
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAI 383



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 47/282 (16%)

Query: 508 LKQGKQMHAYAMKSGFE---------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           L+  + +HA  +K+G           L+LCV S   D       +  A S+F  I  P+ 
Sbjct: 46  LQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFD------GLPYAISVFETIQEPNL 99

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           + W TM  G   + +   AL +Y  M   G++P+ +TF  L+K+ +   A ++G+QIH +
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGH 159

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDA--------------------------YI--- 649
           ++KL    D FV  SL+ +Y + G +EDA                          YI   
Sbjct: 160 VLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESA 219

Query: 650 --LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             LF ++ +++ V WNAM+ G A+ GN +E L+LF++M    + PD  T + V+SAC+ +
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQS 279

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           G + E     H   + +G    ++  + L+D   + G  + A
Sbjct: 280 GSI-ELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETA 320


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 196/509 (38%), Positives = 290/509 (56%), Gaps = 25/509 (4%)

Query: 413 IHVHAIKNDTVADSFV-STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           +H H + +  + +  V    ++++Y + G + +A  +F+     D+ TW A+I G+  +N
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               AL LF  M   G + +  T+++ +KA G    L  G Q+HA+ +K G++  + V S
Sbjct: 169 RPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY +CG M  AQ  F+ +P   +V+W  +ISG    GE + AL +  +M+     P
Sbjct: 229 ALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQP 288

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
             FT++ +  A + + ALEQG+ +HA++IK       F+G +L+DMYAK G+I+DA  +F
Sbjct: 289 THFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVF 348

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            ++   + V WN ML G AQHG G+ETL  FE M   G+EP+ ++F+ VL+ACS++GL+ 
Sbjct: 349 DRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLD 408

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E    F LM+ KY +EP+V HY   VD LGR G    A   I  MP E +A++  ALLGA
Sbjct: 409 EGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGA 467

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR+  + E G + AE+   L+P DS   +LLSNI+A+A +W DV   R  MK   VKK P
Sbjct: 468 CRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQP 527

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
           A                         I  K E +  +IKE GYVPDT  VLL V+++E+E
Sbjct: 528 ACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQERE 587

Query: 869 RALYYHSEKLARAYGLISTPPSSVILSNK 897
             L YHSEKLA A+ L++TP  S I   K
Sbjct: 588 EKLQYHSEKLALAFALLNTPTGSPIRIKK 616



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 179/387 (46%), Gaps = 48/387 (12%)

Query: 351 GQQIHGTTLKSGFY-SAVIVGNSLINMYSKMGCV-------------------------- 383
           G+ +H   + S F  + +++ N ++NMY+K GC+                          
Sbjct: 106 GRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFS 165

Query: 384 -----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                             GL+ + FTL+S+L+AS S   GL    Q+H   +K    +  
Sbjct: 166 QNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGS-EHGLDPGTQLHAFCLKYGYQSSV 224

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V +AL+D+Y R G M  A+  F+        +WNA+I G+        AL L   M   
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
             +    T ++   AC  +  L+QGK +HA+ +KSG +L   + + +LDMY K G++ DA
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +F+ +  PD V+W TM++GC  +G     L  + QM   G+ P+E +F  ++ A S  
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHS 404

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAM 665
             L++G      + K     D    ++ VD+  + G ++ A    ++M +  T  +W A+
Sbjct: 405 GLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEP 692
           L     H N E  L ++   +A  ++P
Sbjct: 465 LGACRMHKNME--LGVYAAERAFELDP 489



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 144/254 (56%), Gaps = 6/254 (2%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELD--LCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           +K C  L  ++QG+ +HA+ + S F LD  L + + I++MY KCG + DA+ +F+++P  
Sbjct: 94  LKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V WT +I+G   N     AL ++ QM   G+ P+ FT + L+KAS     L+ G Q+H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  +K    S  +VG +LVDMYA+CG+++ A + F  M  ++ V WNA++ G A+ G GE
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSF 735
             L L   M+    +P   T+  V SAC+  G + +  + + H++  K G++      + 
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI--KSGLKLIAFIGNT 330

Query: 736 LVDALGRAGRTKEA 749
           L+D   +AG   +A
Sbjct: 331 LLDMYAKAGSIDDA 344



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 40/316 (12%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLM------TMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           LGK    RI+++  +   FL N+L+       MY++CG L  ARR+FD+MP +D+++W +
Sbjct: 100 LGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTA 159

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++A ++ +         +   LF  +       +  TL+ LLK   S   +     +H +
Sbjct: 160 LIAGFSQNNRPR-----DALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAF 214

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            LK G     +V  ALV++Y++ G +  A+  FDGM  +  V W  ++  +A  G GE  
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAI----KLLLYNNNS---- 295
            HL   + R    P   +   V    + +G   + + V A+ I    KL+ +  N+    
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334

Query: 296 --------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                               +VV WN  L+G  Q G     ++ F  M+R  ++ + ++F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394

Query: 336 LVALAAVAGTDNLNLG 351
           L  L A + +  L+ G
Sbjct: 395 LCVLTACSHSGLLDEG 410



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 17/250 (6%)

Query: 30  NLPSFSLSLLP-----FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQ 84
           N P  +L L P      LQ +HF+ SS       +L+ + S   L  G   HA  L    
Sbjct: 168 NRPRDALLLFPQMLRLGLQPNHFTLSS-------LLKASGSEHGLDPGTQLHAFCLKYGY 220

Query: 85  IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
               ++ + L+ MY+RCG +  A+  FD MP +  +SWN++++ +A  GEG         
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE-----HAL 275

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            L   ++      +  T + +   C S G +   + VH + +K GL    F+   L+++Y
Sbjct: 276 HLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMY 335

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G I +AK +FD + + DVV W  ML   A++G G+E    F  + R G+ P++ S  
Sbjct: 336 AKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFL 395

Query: 265 CVLGVISDLG 274
           CVL   S  G
Sbjct: 396 CVLTACSHSG 405



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 36/252 (14%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFV-SGALVNIYSKFGKIREAKFLFDGMQER 223
           LLK C   G V     VH + +    + +  V    +VN+Y+K G + +A+ +FD M  +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI-SDLGKRHEEQVQ 282
           D+V W  ++  +++N    +   LF  + R GL P+  ++  +L    S+ G     Q+ 
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 283 AYAIKLLLYNNNSNV-------------------------------VLWNKKLSGYLQVG 311
           A+ +K   Y   S+V                               V WN  +SG+ + G
Sbjct: 213 AFCLK---YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           +   A+     M R N Q    T+    +A A    L  G+ +H   +KSG      +GN
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329

Query: 372 SLINMYSKMGCV 383
           +L++MY+K G +
Sbjct: 330 TLLDMYAKAGSI 341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 5/193 (2%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDA 647
           +VPD   ++ L+K  + L  +EQGR +HA+L+      +  V  + +V+MYAKCG ++DA
Sbjct: 83  LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SY 706
             +F +M  ++ V W A++ G +Q+    + L LF  M   G++P+  T   +L A  S 
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSE 202

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            GL  +     H    KYG +  V   S LVD   R G    A      MP ++  S + 
Sbjct: 203 HGL--DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNA 260

Query: 767 ALLGACRVQGDTE 779
            + G  R +G+ E
Sbjct: 261 LISGHAR-KGEGE 272


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  361 bits (927), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 210/585 (35%), Positives = 322/585 (55%), Gaps = 58/585 (9%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI-DVYCRNGSM 442
           CG    + TL S +    +    L   + IH H I++ T  D  V    I ++Y + GS+
Sbjct: 98  CGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            EA+ LF+     D+ +W  +I GY  S  + +AL LF  M   G + +E T+++ +KA 
Sbjct: 157 EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKAS 216

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           G       G+Q+HA+++K G+++++ V S +LDMY +   M +A+ IFN + A + V+W 
Sbjct: 217 GTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWN 276

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA-ILVKASSCLTALEQGRQIHANLIK 621
            +I+G    GE +  + ++ QM   G  P  FT++ +L  ASS   +LEQG+ +HA++IK
Sbjct: 277 ALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASS--GSLEQGKWVHAHVIK 334

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                  ++G +L+DMYAK G+I+DA  +F+++  ++ V WN+++ G AQHG G E L+L
Sbjct: 335 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 394

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE M    V+P+ +TF+ VL+ACS++GL+ E    F LM+ K+ IE +V H+  +VD LG
Sbjct: 395 FEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLG 453

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAGR  EA + I  MP + +A++  ALLGACR+  + + G + AE++  L+P DS  +VL
Sbjct: 454 RAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVL 513

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------------DLI 835
           LSNI+A+A +  D    R  MK   VKK+PA                            +
Sbjct: 514 LSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRM 573

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILS 895
           + K+ G   +IKE GYVPDT  VL  + ++++E  L YHSEKLA A+ ++ TPP   I  
Sbjct: 574 WEKISG---KIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRI 630

Query: 896 NKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            K                            NRFHH   GMC C D
Sbjct: 631 KKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRD 675



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 33/309 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G++ HA I +S+   D  L N ++ MY++CGSL  A+ LFDKMP +D++SW  +++ Y+ 
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQ 183

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           SG+      +E   LF  +       +  TL+ LLK   +         +H ++LK G  
Sbjct: 184 SGQA-----SEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V  +L+++Y+++  +REAK +F+ +  ++VV W  ++  +A  G GE V  LF  +
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM 298

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK----LLLYNNNS------------ 295
            R G  P   +   VL   S       + V A+ IK     + Y  N+            
Sbjct: 299 LRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 358

Query: 296 ------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       ++V WN  +SGY Q G    A++ F  M+++ VQ + +TFL  L A +
Sbjct: 359 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 418

Query: 344 GTDNLNLGQ 352
            +  L+ GQ
Sbjct: 419 HSGLLDEGQ 427



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/416 (21%), Positives = 168/416 (40%), Gaps = 92/416 (22%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           ++N+Y+K G + EA+ LFD M  +D+V W V++  Y+++G   E   LF  +   G  P+
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205

Query: 260 DESVQCVLGVISDLGK--RHEEQVQAYAIKL--------------------------LLY 291
           + ++  +L   S  G    H  Q+ A+++K                           +++
Sbjct: 206 EFTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIF 264

Query: 292 NN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           N+    NVV WN  ++G+ + G+    +  F  M+R   +    T+   LA  A + +L 
Sbjct: 265 NSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLAC-ASSGSLE 323

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
            G+ +H   +KSG      +GN+LI+MY+K G +                          
Sbjct: 324 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD------------------------ 359

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K++    +K D V+      ++I  Y ++G  AE                         
Sbjct: 360 AKKVFRRLVKQDIVS----WNSIISGYAQHGLGAE------------------------- 390

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                 AL+LF  M  +  + +EIT  + + AC    +L +G+       K   E  +  
Sbjct: 391 ------ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 444

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
              ++D+  + G + +A     ++P  P    W  ++  C  +   DL +    Q+
Sbjct: 445 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQI 500



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 15/219 (6%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S+  L  GK  HA ++ S   P  ++ N L+ MY++ GS+  A+++F ++  +D++SWNS
Sbjct: 318 SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNS 377

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           I++ YA  G G      E  +LF  + ++    + +T   +L  C  SG +   +     
Sbjct: 378 IISGYAQHGLG-----AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 432

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML---RAYAENGF 240
             K  +         +V++  + G++ EA KF+ +   +    +W  +L   R +     
Sbjct: 433 MKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDL 492

Query: 241 G----EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           G    E++F L  D H SG      ++    G +SD  K
Sbjct: 493 GVYAAEQIFEL--DPHDSGPHVLLSNIYASAGRLSDAAK 529


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 260/945 (27%), Positives = 430/945 (45%), Gaps = 130/945 (13%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +C  +  A  +FD +  +++ SW  ++AAY+ +G     +  E   LF  ++   T 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNG-----HYREALELFTRMQWEGTR 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
             ++     L  C +SG +     +H   +  GL  +  +S +LVN+Y K   +  A+ +
Sbjct: 56  PDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKV 115

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----- 271
           FDGM  RDVV W  ML  YA+NG   +       +   G+ P+  +   ++ V +     
Sbjct: 116 FDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLL 175

Query: 272 DLGKRHEEQVQAYAIK---------LLLYNN---------------NSNVVLWNKKLSGY 307
           DLG++   ++    ++         + +Y +                S+V+LW   ++G 
Sbjct: 176 DLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGC 235

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            Q G     +  F  M    V+ + VT++  +      D +  G+ I    L+S F S+ 
Sbjct: 236 SQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSST 295

Query: 368 IVGNSLINMYSKMGCV------------------------C------------------- 384
           ++  SLI++Y + G +                        C                   
Sbjct: 296 LLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDME 355

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMA 443
           G   ++ T  SVL A ++L E L   ++IH   +    +  +  V  ++I +Y + G   
Sbjct: 356 GFGANKVTYLSVLEACANL-EALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTE 414

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A  +FE     D  +WNA+I   + ++    ALELF  M   G R +E T+ + ++ACG
Sbjct: 415 AAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACG 474

Query: 504 CLLMLKQGKQMHAYAMKSGFELD-LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
            L  LK  +Q+HA A   GF  +   V + +++MY +CG+++DA+  F+ +     VAW+
Sbjct: 475 GLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWS 534

Query: 563 TMISGCVD--NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
            +++      +G    A   + +M   G+ P E TF   + A + +  LE GR +H    
Sbjct: 535 IILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 594

Query: 621 KLDCSSDPFV-GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
                    V G ++++MY KCG+  DA ++F QM  +  + WN+++V  A +G+  E L
Sbjct: 595 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEAL 654

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
              ++M   G +PDS T + +L   S+ GL+    E+F    + +G+EP       LVD 
Sbjct: 655 SSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDL 714

Query: 740 LGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
           L R G    A ELIL+ P  +A       LL AC+  GD + G   AE++  LEP  S +
Sbjct: 715 LARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGS 774

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLI 835
           +V+L+N++A+  +W D +  R  M+R +VKK+P                          I
Sbjct: 775 FVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREI 834

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP------ 889
              +E L  R++E GYVPDT  V+ DVEE +KE  L  HSE+LA  +GL+ST P      
Sbjct: 835 CEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRV 894

Query: 890 -----------------SSVILSNKEPLYANRFHHLRDGMCPCAD 917
                            SSV+        ++RFHH + G C C D
Sbjct: 895 VKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGD 939



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 199/802 (24%), Positives = 351/802 (43%), Gaps = 105/802 (13%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSS---SSSQW---------FSILRHAISTS-DL 69
           F   + +N+ S+++ +  + Q  H+  +    +  QW         F I   A + S +L
Sbjct: 15  FDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGEL 74

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             G+  H+ ++ S    +  ++N+L+ MY +C  +  A ++FD M  RD++SW ++LA Y
Sbjct: 75  DHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVY 134

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           A +G       ++       +       +++T   ++ +C     +     +H   +  G
Sbjct: 135 AQNG-----CWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEG 189

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D  +  ALV++Y   G   + K +F  M +  V+LW  M+   ++NG  EE   +F 
Sbjct: 190 LEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFR 249

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------------------- 287
            +   G+  ++ +   ++ V  +L    E E + A  ++                     
Sbjct: 250 KMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCG 309

Query: 288 -------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                  LL +    +VV WN  ++   Q GDN  AI     M       + VT+L  L 
Sbjct: 310 ILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLE 369

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSKMGC----------------- 382
           A A  + L+ G++IH   L  G     V VGNS+I MY K G                  
Sbjct: 370 ACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDV 429

Query: 383 --------------------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                                     + GLR+++FTL S+L A   L E L L++QIH  
Sbjct: 430 SWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGL-EDLKLARQIHAR 488

Query: 417 AIKNDTVADSF-VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN--S 473
           A       +S  V  +++++Y R GS+ +A+  F++ +   L  W+ ++  Y  S +   
Sbjct: 489 AAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPG 548

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSG 532
            +A + F  M   G +  E+T  +A+ AC  +  L+ G+ MH  A  SGF E  L + + 
Sbjct: 549 RRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNT 608

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           I++MY KCG+  DA+ +F+ +P    ++W ++I     NG    ALS   +M L G  PD
Sbjct: 609 IINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPD 668

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDA--Y 648
             T   ++   S    LE+G +   + I+ D   +P  G    LVD+ A+ G ++ A   
Sbjct: 669 SGTSVSILYGLSHAGLLERGVEHFRSSIQ-DHGLEPSSGQLKCLVDLLARKGFLDAAEEL 727

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYT 707
           IL       +T+ W  +L     +G+ +  ++  E  +   +EP  S +F+ + +  +  
Sbjct: 728 ILASPACQADTIAWMTLLAACKSYGDPQRGIRCAE--RVFELEPQHSGSFVVLANLYASV 785

Query: 708 GLVSEAYENFHLMREKYGIEPE 729
           G  S+A      M E+  ++ E
Sbjct: 786 GRWSDA-SRIRKMMERMSVKKE 806


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 236/774 (30%), Positives = 363/774 (46%), Gaps = 141/774 (18%)

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           +A ++   L+ ++  V  WN+ +   + +G     ++ +  M R   + D  TF   L A
Sbjct: 76  KALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKA 135

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------ 383
                +   G  +H     SGF   V VGN L++MY + G                    
Sbjct: 136 CGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDL 195

Query: 384 -----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         G+R D  +L +VL A +S+       KQ+H
Sbjct: 196 VSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV-GAWSRGKQVH 254

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY------- 467
            +A+++    D FV  A++D+Y + G M EA  +FE     D+ +WNAM+ GY       
Sbjct: 255 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 314

Query: 468 -----------------------ILSNNSHK-----ALELFSHMHTSGERLDEITIATAV 499
                                  +++  + +     AL++F  M   G   + +T+ + +
Sbjct: 315 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLL 374

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELD-------LCVSSGILDMYVKCGAMVDAQSIFND 552
             C     L  GK+ H +A+K    LD       L V + ++DMY KC +   A+++F+ 
Sbjct: 375 SGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 434

Query: 553 IPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRLSG--VVPDEFTFAILVKASSCLTA 608
           IP  D   V WT +I G   +GE + AL ++ QM      V+P+ FT +  + A + L A
Sbjct: 435 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 494

Query: 609 LEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           L  GRQIHA +++    S   FV   L+DMY+K G+++ A ++F  M  RN V W +++ 
Sbjct: 495 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 554

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G   HG GEE L++F +M+  G+ PD VTF+ VL ACS++G+V +    F+ M + +G+ 
Sbjct: 555 GYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 614

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P  EHY+ +VD L RAGR  EA ELI  MP + + ++  ALL ACRV  + E G++ A +
Sbjct: 615 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 674

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------- 831
           L+ LE  +  +Y LLSNI+A A  W DV   R  MK   +KK P                
Sbjct: 675 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 734

Query: 832 -------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  +  I+  +  L++RIK  GYVPD  F L DV++EEK   L  HSEKLA AYG+
Sbjct: 735 GDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGI 794

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           ++T P + I   K                           ++RFHH ++G C C
Sbjct: 795 LTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSC 848



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 310/693 (44%), Gaps = 95/693 (13%)

Query: 39  LPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARIL------NSSQIPDRFLTN 92
           L FL    FS++SS++   S L H   +  L   +  H ++L      + + I   +LT 
Sbjct: 14  LLFLTTFFFSTASSTTDLTSTLFHQCKS--LASAELIHQQLLVQGLPHDPTHIISMYLTF 71

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           N     S   +L   RRL        +  WN ++    H G      + +  +L+R ++ 
Sbjct: 72  N-----SPAKALSVLRRLHPS--SHTVFWWNQLIRRSVHLG-----FLEDVLQLYRRMQR 119

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                   T   +LK C          +VH      G  W+ FV   LV++Y + G    
Sbjct: 120 LGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWEN 179

Query: 213 AKFLFDGMQER---DVVLWKVMLRAYAENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLG 268
           A+ +FD M+ER   D+V W  ++ AY + G       +F  +    G+ PD  S+  VL 
Sbjct: 180 ARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLP 239

Query: 269 VISDLGK-RHEEQVQAYAIKLLLYNN----------------------------NSNVVL 299
             + +G     +QV  YA++  L+ +                              +VV 
Sbjct: 240 ACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS 299

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  ++GY Q+G    A+  F  +    ++ + VT+   +A                   
Sbjct: 300 WNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG------------------ 341

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
               Y+   +G   ++++ +M  +CG   +  TL S+L   +     LH  K+ H HAIK
Sbjct: 342 ----YAQRGLGFEALDVFRQMR-LCGSEPNVVTLVSLLSGCALAGTLLH-GKETHCHAIK 395

Query: 420 -------NDTVADSFVSTALIDVY--CRNGSMAEAEY-LFENKDGFDLATWNAMIFGYIL 469
                  ND   D  V  ALID+Y  C++   A A + L   KD   + TW  +I G   
Sbjct: 396 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDR-SVVTWTVLIGGNAQ 454

Query: 470 SNNSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD- 526
              +++ALELFS M      +  +  TI+ A+ AC  L  L+ G+Q+HAY +++ FE   
Sbjct: 455 HGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM 514

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           L V++ ++DMY K G +  A+ +F+++   + V+WT++++G   +G  + AL I+++M+ 
Sbjct: 515 LFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 574

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNI 644
            G+VPD  TF +++ A S    ++QG   + N +  D    P       +VD+ ++ G +
Sbjct: 575 VGLVPDGVTFVVVLYACSHSGMVDQGIN-YFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633

Query: 645 EDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGE 676
           ++A  L + M M+ T  +W A+L     + N E
Sbjct: 634 DEAMELIRGMPMKPTPAVWVALLSACRVYANVE 666



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 181/357 (50%), Gaps = 14/357 (3%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--N 451
           +++     SL     + +Q+ V  + +D        T +I +Y    S A+A  +    +
Sbjct: 33  STLFHQCKSLASAELIHQQLLVQGLPHD-------PTHIISMYLTFNSPAKALSVLRRLH 85

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
                +  WN +I   +        L+L+  M   G R D  T    +KACG +   + G
Sbjct: 86  PSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCG 145

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP---APDDVAWTTMISGC 568
             +HA    SGFE ++ V +G++ MY +CGA  +A+ +F+++      D V+W ++++  
Sbjct: 146 ASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAY 205

Query: 569 VDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           +  G+   A+ ++ +M    G+ PD  +   ++ A + + A  +G+Q+H   ++     D
Sbjct: 206 MQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFED 265

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FVG ++VDMYAKCG +E+A  +F++M +++ V WNAM+ G +Q G  ++ L LFE ++ 
Sbjct: 266 VFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIRE 325

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             +E + VT+  V++  +  GL  EA + F  MR   G EP V     L+     AG
Sbjct: 326 EKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMR-LCGSEPNVVTLVSLLSGCALAG 381


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 231/686 (33%), Positives = 349/686 (50%), Gaps = 79/686 (11%)

Query: 283 AYAIKLLLYN---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
           +YA+ L   N   +  NV +WN  + GY        ++  F  M+   VQ +S TF    
Sbjct: 79  SYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLF 138

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
            +       + G+Q+H   LK   +    V  S+I+MY+ +G        +   A ++  
Sbjct: 139 KSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVG--------EMDFARLVFD 190

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            SSL                     D+   TALI  Y   G + +A  LF+     D+ +
Sbjct: 191 KSSL--------------------RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVS 230

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WNAMI GY+ S    +A+  F  M  +    ++ T+   + ACG     + GK + ++  
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
            +GF  +L +++ ++DMY KCG    A+ +F+ I   D ++W TMI G       + AL+
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMY 638
           ++  M  S V P++ TF  ++ A +CL AL+ G+ +HA + K L  SS+  +  SL+DMY
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDSVTF 697
           AKCG IE A  +F+ M  RN   WNAML G A HG+ E  L LF +M   G+  PD +TF
Sbjct: 411 AKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITF 470

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +GVLSAC+  GLV   ++ F  M + YGI P+++HY  ++D L RA + +EA  L+ +M 
Sbjct: 471 VGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME 530

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            E   ++  +LL AC+  G  E G++VAE+L  LEP ++ A+VLLSNI+A A +WDDV  
Sbjct: 531 MEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVAR 590

Query: 818 ARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPD 854
            R  +  K +KK P                        + I+  +  + K ++E G+VP+
Sbjct: 591 IRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPN 650

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------------- 893
           T  VL D++EE KE AL  HSEKLA ++GLI T P + I                     
Sbjct: 651 TSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISK 710

Query: 894 LSNKEPLY--ANRFHHLRDGMCPCAD 917
           + N+E +    NRFHH +DG C C D
Sbjct: 711 IFNREIIARDRNRFHHFKDGFCSCND 736



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 186/406 (45%), Gaps = 39/406 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCR---NGSMAEAEYLFENKD---GFDLATWNAMI 464
           KQIH   IK       FV + LI  +C    +G ++ A  LFE        ++  WN++I
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIH-FCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLI 103

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY LS++   +L LFS M   G + +  T     K+C       +GKQ+HA+A+K    
Sbjct: 104 RGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALH 163

Query: 525 LDLCVSSGILDMYVKCGAM-------------------------------VDAQSIFNDI 553
            +  V + ++ MY   G M                                DA+ +F++I
Sbjct: 164 FNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEI 223

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
           P  D V+W  MISG V +G  + A+  +++M+ + V+P++ T  +++ A     + E G+
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK 283

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            I + +      S+  +  +L+DMY KCG  + A  LF  ++ ++ + WN M+ G +   
Sbjct: 284 WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLS 343

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             EE L LFE M    V+P+ VTF+G+L AC+  G +         + +          +
Sbjct: 344 LYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLW 403

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           + L+D   + G  + A  +  SM     AS + A+L    + G  E
Sbjct: 404 TSLIDMYAKCGCIEAAERVFRSMHSRNLASWN-AMLSGFAMHGHAE 448



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 127/552 (23%), Positives = 227/552 (41%), Gaps = 99/552 (17%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDR---DLISWNSILA 127
           K  H+ I+ +      F+ + L+     S  G L YA  LF++       ++  WNS++ 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y+ S    +        L+  ++      +  T   L K C  +      + +H +ALK
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQ-----PNSHTFPFLFKSCTKAKATHEGKQLHAHALK 159

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           + L ++  V  +++++Y+  G++  A+ +FD    RD V +  ++  Y   G        
Sbjct: 160 LALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG-------- 211

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
                    C DD              +R  +++              +VV WN  +SGY
Sbjct: 212 ---------CLDD-------------ARRLFDEIPV-----------KDVVSWNAMISGY 238

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           +Q G    AI CF  M  +NV  +  T +V L+A   T +  LG+ I      +GF S +
Sbjct: 239 VQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNL 298

Query: 368 IVGNSLINMYSKMG-------------------------------------------CVC 384
            + N+LI+MY K G                                              
Sbjct: 299 QLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRS 358

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMA 443
            ++ +  T   +L A + L   L L K +H +  KN    +++ + T+LID+Y + G + 
Sbjct: 359 NVKPNDVTFLGILHACACLG-ALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIE 417

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKAC 502
            AE +F +    +LA+WNAM+ G+ +  ++ +AL LFS M   G  R D+IT    + AC
Sbjct: 418 AAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSAC 477

Query: 503 GCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
               ++  G Q     ++  G    L     ++D+  +     +A+ +  ++   PD   
Sbjct: 478 TQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAI 537

Query: 561 WTTMISGCVDNG 572
           W +++S C  +G
Sbjct: 538 WGSLLSACKAHG 549



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 166/375 (44%), Gaps = 57/375 (15%)

Query: 71  LGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           +G+   AR + + S + D      L+T Y   G L  ARRLFD++P +D++SWN++++ Y
Sbjct: 179 VGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGY 238

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             SG        E    F  ++E+    ++ T+  +L  C  +      + +  +    G
Sbjct: 239 VQSGR-----FEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG 293

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              +  ++ AL+++Y K G+   A+ LFDG++E+DV+ W  M+  Y+     EE   LF 
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353

Query: 250 DLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS--------- 295
            + RS + P+D +   +L   +     DLGK     V AY  K L  ++N+         
Sbjct: 354 VMLRSNVKPNDVTFLGILHACACLGALDLGK----WVHAYIDKNLRNSSNASLWTSLIDM 409

Query: 296 --------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV-QYDSVT 334
                               N+  WN  LSG+   G    A+  F  M+   + + D +T
Sbjct: 410 YAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDIT 469

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL--RTDQFT 392
           F+  L+A      ++LG Q         ++ ++I    +       GC+  L  R ++F 
Sbjct: 470 FVGVLSACTQAGLVDLGHQ---------YFRSMIQDYGISPKLQHYGCMIDLLARAEKFE 520

Query: 393 LASVLRASSSL-PEG 406
            A +L  +  + P+G
Sbjct: 521 EAEILMKNMEMEPDG 535


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 251/827 (30%), Positives = 418/827 (50%), Gaps = 95/827 (11%)

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           ES      +T + LLK C+ +      + +H       L  D  +  +L+ +YSK     
Sbjct: 45  ESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPI 104

Query: 212 EAKFLFDGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLG 268
            A  +F  M+  +RDVV +  ++  +A N    +   +F  L  + G+ P++    C   
Sbjct: 105 TAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNE---YCFTA 161

Query: 269 VISDL--GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ---VGDNHGAIECFVNM 323
           VI     G   +  +  +   L     +S+V +  + +  +++   + D   A + F  M
Sbjct: 162 VIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKM 221

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              NV    VT+ + +  +A                + G+       +  I+++ +M   
Sbjct: 222 REKNV----VTWTLMITRLA----------------QYGY------NDEAIDLFLEMLVS 255

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G   D+FTL  ++   + + + L L K++H   I++  V D  V  +L+D+Y + G + 
Sbjct: 256 SGYVPDRFTLTGLISVCAEI-QFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQ 314

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHK--ALELFSHMHTSGERLDE-ITIATAVK 500
           EA  +F+     ++ +W A++ GY+     ++  A+ +FS+M   G       T +  +K
Sbjct: 315 EARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLK 374

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L     G+Q+H   +K G     CV +G++ +Y K G M  A+  F+ +   + V+
Sbjct: 375 ACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVS 434

Query: 561 WTTMISGCVD----NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
            T +    V     N E+DL      ++   G     FT+A L+  ++C+  + +G QIH
Sbjct: 435 ETVVDDTNVKDFNLNSEQDLD----REVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIH 490

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A ++K+   +D  V  +L+ MY+KCGN E A  +F  M+  N + W +++ G A+HG   
Sbjct: 491 AMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFAS 550

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + L+LF +M   GV+P+ VT+I VLSACS+ GL+ EA+++F  MR+ +GI P +EHY+ +
Sbjct: 551 KALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACM 610

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGR+G   EA E I SMPF+A A + R  LG+CRV  +T+ G+  A+ ++  EP D 
Sbjct: 611 VDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDP 670

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD-----------------------PAD 833
           + Y+LLSN++A   +W+DV + R  MK+K + K+                        A 
Sbjct: 671 ATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQ 730

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP-PSSV 892
            I+ K++ L  +IK  GYVP+TDFVL DVE+E+KE+ L+ HSEKLA A+ LISTP P  +
Sbjct: 731 QIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPI 790

Query: 893 --------------------ILSNKEPLY--ANRFHHLRDGMCPCAD 917
                               ++S +E +   ANRFHH++DG C C D
Sbjct: 791 RVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCND 837



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 142/596 (23%), Positives = 263/596 (44%), Gaps = 93/596 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-- 116
           +L+  I T +  LGK  H ++  S+   D  L N+L+T+YS+    + A  +F  M +  
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYV 175
           RD++S++SI++ +A     N  N  +   +F + L +   + +      +++ CL  G+ 
Sbjct: 118 RDVVSYSSIISCFA-----NNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172

Query: 176 WASETVHGYALKIGLVWDEFVSGA-LVNIYSK---FGKIREAKFLFDGMQERDVVLWKVM 231
                + G+ LK G        G  L++++ K      +  A+ +FD M+E++VV W +M
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 232 LRAYAENGFGEEVFHLFVD-LHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYA 285
           +   A+ G+ +E   LF++ L  SG  PD  ++  ++ V ++     LGK     V    
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 286 IKLLLYNNNS------------------------NVVLWNKKLSGYLQVGDNH--GAIEC 319
           + L L    S                        NV+ W   ++GY++ G  +   A+  
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRM 352

Query: 320 FVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
           F NM ++  V  +  TF   L A A   + + G+Q+HG T+K G  +   VGN L+++Y+
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYA 412

Query: 379 KMG-------CV------------------------------------CGLRTDQFTLAS 395
           K G       C                                      G     FT AS
Sbjct: 413 KSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYAS 472

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           +L  ++ +   +   +QIH   +K     D  V+ ALI +Y + G+   A  +F + +  
Sbjct: 473 LLSGAACIGT-IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDC 531

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           ++ TW ++I G+     + KALELF +M  +G + +++T    + AC  + ++ +  + H
Sbjct: 532 NVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK-H 590

Query: 516 AYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             +M+   G    +   + ++D+  + G + +A    N +P   D + W T +  C
Sbjct: 591 FTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSC 646



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 14/294 (4%)

Query: 474 HKALELFSHMHTSGERLDE-ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           HKA+   +   T     ++ IT +  +K C        GK +H     S   LD  + + 
Sbjct: 33  HKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNS 92

Query: 533 ILDMYVKCGAMVDAQSIFNDI--PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GV 589
           ++ +Y K    + A SIF  +     D V+++++IS   +N     A+ ++ Q+ L  GV
Sbjct: 93  LITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGV 152

Query: 590 VPDEFTFAILVKASSCLTA--LEQGRQIHANLIKLD-CSSDPFVGISLVDMYAK---CGN 643
            P+E+ F  +++A  CL     + G  +   ++K     S   VG  L+DM+ K     +
Sbjct: 153 YPNEYCFTAVIRA--CLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLAD 210

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLS 702
           +E A  +F +M  +N V W  M+  LAQ+G  +E + LF +M  + G  PD  T  G++S
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            C+    +S   E  H    + G+  ++     LVD   + G  +EA ++   M
Sbjct: 271 VCAEIQFLSLGKE-LHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM 323



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 20/232 (8%)

Query: 30  NLPSFSLSLLPFLQKS--HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           N+  F+L+    L +   +  S  SS  + S+L  A     +  G+  HA ++      D
Sbjct: 442 NVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD 501

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             + N L++MYS+CG+   A ++F+ M D ++I+W SI+  +A  G       ++   LF
Sbjct: 502 LSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFA-----SKALELF 556

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYV---WASETVHGYALKI--GLVWDEFVSGALVN 202
            ++ E+    + +T   +L  C   G +   W     H  +++   G+V        +V+
Sbjct: 557 YNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK----HFTSMRDNHGIVPRMEHYACMVD 612

Query: 203 IYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEEVFHLFVD 250
           +  + G + EA    + M  + D ++W+  L   R +     GE    + ++
Sbjct: 613 LLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILE 664


>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
 gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
          Length = 917

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 239/825 (28%), Positives = 400/825 (48%), Gaps = 88/825 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L    +T DL  GK  H  +L +    +  +  +L+ MY +CG +  ARR+FDK+ 
Sbjct: 106 FVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLA 165

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            +D++SW S++  Y        +   E   LF  +R S    +R+T A  +  C     +
Sbjct: 166 LQDVVSWTSMIMTYVQH-----DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESM 220

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +H   L+ G   D  VS A+VN+Y K G + +A+ +F+ M   + V W  ++ A 
Sbjct: 221 ADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAAC 280

Query: 236 AENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISD-----LGKRHEEQVQ--AYAIK 287
            ++G   E    F  +  + G  PD  +   +L   S       G+   E +    Y   
Sbjct: 281 TQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTH 340

Query: 288 LLLYN------------NNS----------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           L++ N            +N+          + + WN  +SG+ Q G    A+  F  M+ 
Sbjct: 341 LIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLA 400

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
             +  D  TF+   + + GT  +   + +    ++SG    V + ++LINM+S+ G V  
Sbjct: 401 EGITPDKFTFI---SIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVRE 457

Query: 384 ----------------------------------C-------GLRTDQFTLASVLRASSS 402
                                             C       GL  + FTL + L A +S
Sbjct: 458 ARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACAS 517

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L   K IH HAI+    A   V  ALI++Y + G + EA+ +F ++ G +L +WN 
Sbjct: 518 LT-ALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVF-HQCGKNLVSWNT 575

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +   Y+  +   +AL+LF  M   G + D+++  T +  C       +G ++H   +++G
Sbjct: 576 IAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSA---SEGSKIHNILLETG 632

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            E D  VS+ +L+MY    ++ +A  IF+ +   D V+W  MI+G  ++G    A+ ++ 
Sbjct: 633 MESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQ 692

Query: 583 QMRLSGVVPDEFTFAILVKA--SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           +M+L GV PD+ +F  ++ A   S  ++L+Q R +   +      +D  VG ++V M+ +
Sbjct: 693 RMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGR 752

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
            G + +A   F+++  R+   WN ++   AQHG  E+ LKLF  M+     PDS+T + V
Sbjct: 753 SGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSV 812

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS+ GL+ E Y +F  M  ++GI    EHY  +VD L RAGR  +A EL+  MP  A
Sbjct: 813 LSACSHGGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPA 872

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           S  +   LL AC+VQGD +  K VAE++M L+P   +AYV+LS++
Sbjct: 873 SYVLWMTLLSACKVQGDEKRAKRVAERVMELDPRRPAAYVVLSSV 917



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 279/620 (45%), Gaps = 78/620 (12%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R T   LL LC     +     VH          D+ V  A +++Y K G + +A  +F 
Sbjct: 2   RGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQ 61

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------- 267
            +     V W  +L A+A +G  ++ F +F  +   GL PD  +   VL           
Sbjct: 62  SLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSR 121

Query: 268 -----GVISDLGKRHEEQVQAYAIKLL-----------LYNNNS--NVVLWNKKLSGYLQ 309
                G + + G      V    IK+            +++  +  +VV W   +  Y+Q
Sbjct: 122 GKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQ 181

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 A+E F  M  S V  + +T+  A++A A  +++  G+ IH   L+ GF S V+V
Sbjct: 182 HDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVV 241

Query: 370 GNSLINMYSKMG--------------------------------CV------------CG 385
             +++NMY K G                                CV             G
Sbjct: 242 SCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGG 301

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
              D+ T  ++L A SS P  L   + ++   ++        V   ++ +Y   G +  A
Sbjct: 302 STPDKVTFITILNACSS-PATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              F      D  +WN +I G+  +    +A+ LF  M   G   D+ T  + +      
Sbjct: 361 AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA-- 418

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             +++ K +    ++SG ELD+ + S +++M+ + G + +A+S+F+D+   D V WT++I
Sbjct: 419 -RMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSII 477

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           S  V +G  D AL     MRL G++ ++FT    + A + LTAL +G+ IH++ I+   +
Sbjct: 478 SSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFA 537

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           + P VG +L++MYAKCG +E+A ++F Q   +N V WN +     Q     E L+LF++M
Sbjct: 538 ASPAVGNALINMYAKCGCLEEADLVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEM 596

Query: 686 KAHGVEPDSVTFIGVLSACS 705
           +  G++ D V+F+ VL+ CS
Sbjct: 597 QLEGLKADKVSFVTVLNGCS 616



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 267/619 (43%), Gaps = 95/619 (15%)

Query: 39  LPFLQKSHFSSSSSSSQ--WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           L + Q+      S+  +  + +IL    S + L  G+  +  IL         + N +MT
Sbjct: 290 LWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMT 349

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESIT 155
           MYS CG +  A   F  M +RD ISWN+I++ +A +G  +     E   LFR  L E IT
Sbjct: 350 MYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCD-----EAVHLFRRMLAEGIT 404

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
              + T   ++     +  +  ++ +    ++ G+  D F+  AL+N++S++G +REA+ 
Sbjct: 405 -PDKFTFISIID---GTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARS 460

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD M++RD+V+W  ++ +Y ++G  ++       +   GL  +D ++   L   + L  
Sbjct: 461 LFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTA 520

Query: 276 RHEEQ-VQAYAIK---------------------------LLLYNNNSNVVLWNKKLSGY 307
             E + + ++AI+                           L+ +    N+V WN   + Y
Sbjct: 521 LSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCGKNLVSWNTIAAAY 580

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           +Q      A++ F  M    ++ D V+F+  L    G  + + G +IH   L++G  S  
Sbjct: 581 VQRDKWREALQLFQEMQLEGLKADKVSFVTVL---NGCSSASEGSKIHNILLETGMESDH 637

Query: 368 IVGNSLINMYSKMGCVC------------------------------------------- 384
           IV  +L+NMY+    +                                            
Sbjct: 638 IVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLE 697

Query: 385 GLRTDQFTLASVLRA-SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           G+  D+ +  +VL A S S P  L  ++ +           D+ V  A++ ++ R+G +A
Sbjct: 698 GVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLA 757

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           EA   FE     D A+WN ++  +       +AL+LF  M     R D IT+ + + AC 
Sbjct: 758 EARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACS 817

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSG----ILDMYVKCGAMVDAQSIFNDIPAPDD- 558
              ++++G   H  +M  G E  +  S      ++D+  + G +  A+ +   +P P   
Sbjct: 818 HGGLIEEG-YYHFTSM--GREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASY 874

Query: 559 VAWTTMISGCVDNGEEDLA 577
           V W T++S C   G+E  A
Sbjct: 875 VLWMTLLSACKVQGDEKRA 893



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 147/281 (52%), Gaps = 2/281 (0%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           + +G+ +H+    S F  D  V +  + MY KCG + DA ++F  +  P  V+W ++++ 
Sbjct: 18  IAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAA 77

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G+   A  I+ +M+L G+ PD  TF  ++   +    L +G+ +H  +++     +
Sbjct: 78  FARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERN 137

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             VG SL+ MY KCG +EDA  +F ++ +++ V W +M++   QH    E L+LF  M+ 
Sbjct: 138 VMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRP 197

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            GV P+ +T+   +SAC++   +++  +  H    + G E +V     +V+  G+ G  +
Sbjct: 198 SGVLPNRITYATAISACAHVESMADG-KLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLE 256

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +A E+   MP   + S + A++ AC   G      W  +++
Sbjct: 257 DAREVFERMPHPNTVSWN-AIVAACTQHGCCVEALWYFQRM 296


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 223/710 (31%), Positives = 351/710 (49%), Gaps = 92/710 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           +L N  L GYLQ G     +E F  M   N++ DS +   AL A A + +  +G +I  +
Sbjct: 96  LLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISS 155

Query: 358 TLKSGFYSAVIVG-------------------------------NSLINMYSKMGCV--- 383
            ++ G      VG                               NS+I  Y + GC    
Sbjct: 156 AVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVA 215

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G++    T+ S+++A   +   L L K +H + +      D  V T+ +D
Sbjct: 216 FQLFFEMHGSGIKPSPITMTSLIQACGGIGN-LKLGKCMHGYVLGLGLGNDILVLTSFVD 274

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G +  A ++F      +L +WNAMI G + +    ++ +LF  +  S    D  T
Sbjct: 275 MYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTT 334

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           I + ++ C     L  GK +H  A++S FE +L +S+ I+D+Y KCG++  A  +FN + 
Sbjct: 335 IVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMK 393

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             + + WT M+ G   NG  + AL ++ QM+  G+  +  TF  LV + + L +L++GR 
Sbjct: 394 DRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRS 453

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHG 673
           IH +L +L  + D     +LVDMYAKCG I  A  +F    + ++ VLWN+M+ G   HG
Sbjct: 454 IHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHG 513

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           +G + + ++  M   G++P+  TF+ +LSACS++ LV +    F+ M   + I P  +HY
Sbjct: 514 HGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHY 573

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + LVD L RAGR +EA  LI  MPF+   ++  ALL  CR   +   G   ++KL+AL+ 
Sbjct: 574 ACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDA 633

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------- 832
            +   Y++LSNI+A A +WD V   RG M+ + +KK P                      
Sbjct: 634 MNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHP 693

Query: 833 --DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
             + I+  +E L   ++  GYVPDT  VL DV+EE K R L+ HSE+LA A+GL++TP  
Sbjct: 694 NWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAG 753

Query: 891 SVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           S+I                     +  +E +   ANRFHH  +G C C D
Sbjct: 754 SLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGD 803



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 3/313 (0%)

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S+LR SS   + L   K  H   I N    D FV+T L+  Y    S+  A Y+F+    
Sbjct: 36  SLLRESS---KNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQ 92

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                 NAM+ GY+ S    + LELF  M +    +D  +   A+KAC   L  + G ++
Sbjct: 93  PKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEI 152

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
            + A++ G E +  V S ++   VK G + +AQ +F+ +P  D V W ++I G V  G  
Sbjct: 153 ISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCF 212

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           D+A  ++ +M  SG+ P   T   L++A   +  L+ G+ +H  ++ L   +D  V  S 
Sbjct: 213 DVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSF 272

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           VDMY+K G+IE A  +F +M  RN V WNAM+ G  ++G   E+  LF  +       D 
Sbjct: 273 VDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDL 332

Query: 695 VTFIGVLSACSYT 707
            T + +L  CS T
Sbjct: 333 TTIVSLLQGCSQT 345



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/605 (24%), Positives = 267/605 (44%), Gaps = 96/605 (15%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
            + S+LR   S+ +L+  KSTHA+I+ +S   D+F+   L+  YS   SL  AR +FD+ 
Sbjct: 33  NFLSLLRE--SSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQF 90

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS-G 173
                +  N++L  Y  SG        E F L RS    +   S  T A  LK C SS  
Sbjct: 91  FQPKGLLCNAMLCGYLQSGR--YRETLELFGLMRSRNLEVDSCS-CTFA--LKACASSLD 145

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
           Y    E +   A++ G+  + FV  ++++   KFGKI EA+ +FDGM  +DVV W  ++ 
Sbjct: 146 YEMGMEIISS-AVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIG 204

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYN 292
            Y + G  +  F LF ++H SG+ P   ++  ++     +G  +  + +  Y + L L N
Sbjct: 205 GYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGN 264

Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           +                              N+V WN  +SG ++ G    + + F  ++
Sbjct: 265 DILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLV 324

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
           RS+  +D  T +  L   + T +L  G+ +HG  ++S F S +I+  +++++YSK G + 
Sbjct: 325 RSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLK 383

Query: 385 -------------------------------------------GLRTDQFTLASVLRASS 401
                                                      G+  +  T  S++ + +
Sbjct: 384 QATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCA 443

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD-GFDLATW 460
            L   L   + IH H  +     D    TAL+D+Y + G +  AE +F +     D+  W
Sbjct: 444 HLGS-LKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLW 502

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N+MI GY +  + ++A+ ++  M   G + ++ T  + + AC    +++QG      ++ 
Sbjct: 503 NSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQG-----ISLF 557

Query: 521 SGFELDLCVS------SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGE 573
           +  E D  +       + ++D+  + G   +AQ++   +P  P       ++SGC  +  
Sbjct: 558 NSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKN 617

Query: 574 EDLAL 578
            +L +
Sbjct: 618 INLGI 622



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 1/262 (0%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           K  HA  + +    D  V++ ++  Y    ++  A+ +F+    P  +    M+ G + +
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G     L ++  MR   +  D  +    +KA +     E G +I ++ ++     + FVG
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            S++    K G I +A  +F  M  ++ V WN+++ G  Q G  +   +LF +M   G++
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIK 228

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P  +T   ++ AC   G +    +  H      G+  ++   +  VD   + G  + A  
Sbjct: 229 PSPITMTSLIQACGGIGNLKLG-KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARW 287

Query: 752 LILSMPFEASASMHRALLGACR 773
           +   MP     S +  + G  R
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVR 309



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 17/191 (8%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F Q      +++S  + S++        L  G+S H  +       D      L+ 
Sbjct: 416 ALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVD 475

Query: 97  MYSRCGSLVYARRLFDKMP-DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
           MY++CG +  A R+F      +D++ WNS++  Y   G G      +   ++  + E   
Sbjct: 476 MYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHG-----YQAVGIYHKMIEEGL 530

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS------GALVNIYSKFGK 209
             ++ T   LL  C  S  V       G +L   +  D  +         LV++ S+ G+
Sbjct: 531 KPNQTTFLSLLSACSHSRLV-----EQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGR 585

Query: 210 IREAKFLFDGM 220
             EA+ L + M
Sbjct: 586 FEEAQALIEKM 596


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 254/776 (32%), Positives = 368/776 (47%), Gaps = 139/776 (17%)

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           W      A+++ Y + G+   A+ LFD M ERD+V W VM++ Y  N             
Sbjct: 88  WSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRN------------- 134

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
            R+            LG   +L +R  E+               +V  WN  LSGY Q G
Sbjct: 135 -RN------------LGKARELFERMPER---------------DVCSWNTILSGYAQNG 166

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A   F  M   N     V++   L+A      L     + G+        A++  N
Sbjct: 167 CVDDARRVFDRMPEKN----DVSWNALLSAYVQNSKLEEACVLFGSRENW----ALVSWN 218

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
            L+  + K   +   R  QF                            +  V D      
Sbjct: 219 CLLGGFVKKKKIVEAR--QF--------------------------FDSMKVRDVVSWNT 250

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           +I  Y +NG + EA  LF+     D+ TW AM+ GYI +    +A ELF  M    E   
Sbjct: 251 IITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSW 310

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS----SGILDMYVKCGAMVDAQ 547
              +A  V          QG+++     K  F++  C +    + ++  Y +CG + +A+
Sbjct: 311 NAMLAGYV----------QGERVEM--AKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 358

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           ++F+ +P  D V+W  MI+G   +G    AL ++  M   G   +  +F+  +   + + 
Sbjct: 359 NLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVV 418

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           ALE G+Q+H  L+K    +  FVG +L+ MY KCG+IE+A  LFK+M  ++ V WN M+ 
Sbjct: 419 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 478

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G ++HG GEE L+ FE MK  G++PD  T + VLSACS+TGLV +  + FH M + YG+ 
Sbjct: 479 GYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVR 538

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P  +HY+ +VD LGRAG  +EA  L+ +MPFE  A++   LLGA RV G+TE  +  A+K
Sbjct: 539 PNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 598

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           + A+EP +S  YVLLSN++A++ +W DV   R  M+ K VKK P                
Sbjct: 599 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 658

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                   D IFA +E L  R+K+ GYV  T  VL DVEEEEKER + YHSE+LA AYG+
Sbjct: 659 GDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 718

Query: 885 I---STPPSSVILS--------NKEPLYA------------NRFHHLRDGMCPCAD 917
           +   S  P  VI +        N     A            NRFHH +DG C C D
Sbjct: 719 MRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGD 774



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 163/643 (25%), Positives = 288/643 (44%), Gaps = 82/643 (12%)

Query: 44  KSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS 103
           K  +++++S+S +     H+  +S     + +  + L  S   D    N  ++ Y R G 
Sbjct: 20  KRRYNNANSASNF-----HSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGR 74

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
              A R+F +MP    +S+N++++ Y  +GE         F L R L + +     ++  
Sbjct: 75  CSEALRVFKRMPRWSSVSYNAMISGYLRNGE---------FELARMLFDEMPERDLVSWN 125

Query: 164 PLLKLCLSSGYVW------ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
            ++K     GYV       A E       +    W+  +SG     Y++ G + +A+ +F
Sbjct: 126 VMIK-----GYVRNRNLGKARELFERMPERDVCSWNTILSG-----YAQNGCVDDARRVF 175

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           D M E++ V W  +L AY +N   EE   LF       L     S  C+LG      K  
Sbjct: 176 DRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALV----SWNCLLGGFVKKKKIV 231

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           E +    ++K+       +VV WN  ++GY Q G+   A + F      +  +D  T+  
Sbjct: 232 EARQFFDSMKV------RDVVSWNTIITGYAQNGEIDEARQLF----DESPVHDVFTW-- 279

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
                              T + SG+    +V  +   ++ +M        ++ +  ++L
Sbjct: 280 -------------------TAMVSGYIQNRMVEEAR-ELFDRMP-----ERNEVSWNAML 314

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGF 455
            A     E + ++K++       D +    VST   +I  Y + G ++EA+ LF+     
Sbjct: 315 -AGYVQGERVEMAKELF------DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 367

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D  +W AMI GY  S +S++AL LF  M   G RL+  + ++A+  C  ++ L+ GKQ+H
Sbjct: 368 DPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLH 427

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
              +K G+E    V + +L MY KCG++ +A  +F ++   D V+W TMI+G   +G  +
Sbjct: 428 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGE 487

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ-IHANLIKLDCSSDPFVGISL 634
            AL  +  M+  G+ PD+ T   ++ A S    +++GRQ  H          +      +
Sbjct: 488 EALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACM 547

Query: 635 VDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           VD+  + G +E+A+ L K M    +  +W  +L     HGN E
Sbjct: 548 VDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 590



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 244/537 (45%), Gaps = 45/537 (8%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFD 112
           +W S+  +A+ +  L  G+   AR+L   ++P+R L   N ++  Y R  +L  AR LF+
Sbjct: 87  RWSSVSYNAMISGYLRNGEFELARML-FDEMPERDLVSWNVMIKGYVRNRNLGKARELFE 145

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +MP+RD+ SWN+IL+ YA +G      V +  R+F  + E     + ++   LL   + +
Sbjct: 146 RMPERDVCSWNTILSGYAQNG-----CVDDARRVFDRMPEK----NDVSWNALLSAYVQN 196

Query: 173 GYVWASETVHGYALKIGLV-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
             +  +  + G      LV W+  + G     + K  KI EA+  FD M+ RDVV W  +
Sbjct: 197 SKLEEACVLFGSRENWALVSWNCLLGG-----FVKKKKIVEARQFFDSMKVRDVVSWNTI 251

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLY 291
           +  YA+NG  +E   LF          D+  V  V    + +    + ++   A +L   
Sbjct: 252 ITGYAQNGEIDEARQLF----------DESPVHDVFTWTAMVSGYIQNRMVEEARELFDR 301

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               N V WN  L+GY+Q      A E F  M   NV     T+   +   A    ++  
Sbjct: 302 MPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEA 357

Query: 352 QQIHGTTLKSG--FYSAVIVGNS-------LINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           + +     K     ++A+I G S        + ++  M    G R ++ + +S L   + 
Sbjct: 358 KNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGG-RLNRSSFSSALSTCAD 416

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           +   L L KQ+H   +K       FV  AL+ +YC+ GS+ EA  LF+   G D+ +WN 
Sbjct: 417 VV-ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 475

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKS 521
           MI GY       +AL  F  M   G + D+ T+   + AC    ++ +G+Q  H      
Sbjct: 476 MIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDY 535

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           G   +    + ++D+  + G + +A ++  ++P  PD   W T++     +G  +LA
Sbjct: 536 GVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 592



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 16/203 (7%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           L +S FSS+ S+               L LGK  H R++        F+ N L+ MY +C
Sbjct: 402 LNRSSFSSALST---------CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 452

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           GS+  A  LF +M  +D++SWN+++A Y+  G G      E  R F S++         T
Sbjct: 453 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGE-----EALRFFESMKREGLKPDDAT 507

Query: 162 LAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           +  +L  C  +G V    +  H      G+  +      +V++  + G + EA  L   M
Sbjct: 508 MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567

Query: 221 Q-ERDVVLWKVMLRAYAENGFGE 242
             E D  +W  +L A   +G  E
Sbjct: 568 PFEPDAAIWGTLLGASRVHGNTE 590


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  360 bits (925), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 251/866 (28%), Positives = 411/866 (47%), Gaps = 134/866 (15%)

Query: 181 VHGYALKIGLVW---DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           VH +A+  G +    D F++  LV +Y + G++ +A+ LF+GM  R V  W  ++ AY  
Sbjct: 79  VHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLS 138

Query: 238 NGFGEEVFHLFVDLHRS---GLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL----- 288
           +G   E   ++  +  S   G  PD  ++  VL      G  R   +V   A+K+     
Sbjct: 139 SGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKS 198

Query: 289 -------------------------LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                                     L  +  +V  WN  +SG +Q G    A+  F  M
Sbjct: 199 TLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGM 258

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             +    +S T +  L   A    L+LG+++H   LK G     I  N+L+ MY+K G V
Sbjct: 259 QSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG-SELNIQCNALLVMYAKYGRV 317

Query: 384 -----------------------C--------------------GLRTDQFTLASVLRAS 400
                                  C                    G + D   + S+  A 
Sbjct: 318 DSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSAL 377

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             L   L+  ++ H +AIK     D  V   L+D+Y + GS+  +  +FE+    D  +W
Sbjct: 378 GHLSR-LNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISW 436

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
             ++  +  S+   +ALE+   +   G  +D + I + ++ C  L  +   KQ+H YA++
Sbjct: 437 TTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIR 496

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +G  LDL + + ++D+Y +CG    + ++F  +   D V+WT+MI+ C +NG  + A+ +
Sbjct: 497 NGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFL 555

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           + +M+ + + PD      ++ A + L++L +G+Q+H  LI+ +   +  V  SLVDMY+ 
Sbjct: 556 FTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSG 615

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG++  A  +F++   ++ VLW AM+     HG+G++ + LF+ M   G+ PD V+F+ +
Sbjct: 616 CGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLAL 675

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           L ACS++ LV E      +M  KY ++P  EHY+ +VD LGR+G+T+EA E I +MP + 
Sbjct: 676 LYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDP 735

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            +++  ALLGACRV  +       A KL+ LEP +   Y+L+SN+FA   +W++    R 
Sbjct: 736 KSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRT 795

Query: 821 EMKRKNVKKDPA--------------------------DLIFAKVEGLIKRIKEGGYVPD 854
            M  + ++K+PA                           L  +++  +++R  EGGYV D
Sbjct: 796 RMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRR--EGGYVED 853

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------P 899
           T FVL D  EEEK   L+ HSE++A A+GLIST P   I   K                 
Sbjct: 854 TRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSK 913

Query: 900 LY--------ANRFHHLRDGMCPCAD 917
           L+        ANRFHH   G C C D
Sbjct: 914 LFERDIVVRDANRFHHFSGGSCSCED 939



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 190/707 (26%), Positives = 315/707 (44%), Gaps = 96/707 (13%)

Query: 72  GKSTHARILNSSQI---PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           G+  HA  + +  +    D FL   L+ MY RCG +  ARRLF+ MP R + SWN+++ A
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSR---LTLAPLLKLCLSSGYVWASETVHGYA 185
           Y  SG        E  R++ ++R S    S     TLA +LK C + G       VHG A
Sbjct: 136 YLSSGSAG-----EAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLA 190

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE--RDVVLWKVMLRAYAENGFGEE 243
           +K+GL     V+ AL+ +Y+K G +  A  +F+ +Q+  RDV  W  ++    +NG   E
Sbjct: 191 VKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLE 250

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRH--------EEQVQAYAIKLL 289
              LF  +  +G   +  +   VL V ++LG      + H        E  +Q  A+ L+
Sbjct: 251 ALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNAL-LV 309

Query: 290 LYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y     V               + WN  LS Y+Q      AI+ F  M++   Q D   
Sbjct: 310 MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHAC 369

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-C--------- 384
            +   +A+     LN G++ H   +K   ++ + VGN+L++MY K G + C         
Sbjct: 370 VVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG 429

Query: 385 ---------------------------------GLRTDQFTLASVLRASSSLPEGLHLSK 411
                                            G+  D   + S+L     L + + L K
Sbjct: 430 IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGL-KSISLLK 488

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H +AI+N  + D  +   LID+Y   G    +  LF+  +  D+ +W +MI     + 
Sbjct: 489 QVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNG 547

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
             + A+ LF+ M  +  + D + + + + A   L  L +GKQ+H + ++  F ++  V S
Sbjct: 548 RLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVS 607

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY  CG+M  A  +F      D V WT MI+    +G    A+ ++ +M  +G+ P
Sbjct: 608 SLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTP 667

Query: 592 DEFTFAILVKASSCLTALEQGRQ---IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           D  +F  L+ A S    +E+G+    I  +  +L    + +  +  VD+  + G  E+AY
Sbjct: 668 DHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACV--VDILGRSGQTEEAY 725

Query: 649 ILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
              K M M   + +W A+L     H N    L +    K   +EPD+
Sbjct: 726 EFIKTMPMDPKSAVWCALLGACRVHRN--YGLAVVAANKLLELEPDN 770



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)

Query: 510 QGKQMHAYAMKSGF---ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           +G+Q+HA+A+ +G    + D  +++ ++ MY +CG + DA+ +FN +PA    +W  ++ 
Sbjct: 75  EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134

Query: 567 GCVDNGEEDLALSIYHQMRLS---GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
             + +G    A+ +Y  MR S   G  PD  T A ++KA         G ++H   +K+ 
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFK--QMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                 V  +L+ MYAKCG ++ A  +F+  Q D R+   WN+++ G  Q+G   E L L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M++ G   +S T + VL  C+  GL+S   E  H    K G E  ++  + LV    
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRE-LHAALLKCGSELNIQCNALLV-MYA 312

Query: 742 RAGRTKEA 749
           + GR   A
Sbjct: 313 KYGRVDSA 320



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 237/610 (38%), Gaps = 127/610 (20%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L+L   +Q + F  +S +S   ++L+       L LG+  HA +L      +    N L
Sbjct: 251 ALALFRGMQSAGFPMNSYTS--VAVLQVCAELGLLSLGRELHAALLKCGSELN-IQCNAL 307

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA------YAHSGEGNAENVTEGFR--- 145
           + MY++ G +  A R+F ++ ++D ISWNS+L+       YA + +   E +  GF+   
Sbjct: 308 LVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDH 367

Query: 146 -LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
               SL  ++   SRL                     H YA+K  L  D  V   L+++Y
Sbjct: 368 ACVVSLSSALGHLSRLN---------------NGREFHAYAIKQRLHTDLQVGNTLMDMY 412

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            K G I  +  +F+ M  RD + W  +L  +A++    E   + ++L + G+  D   + 
Sbjct: 413 IKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIG 472

Query: 265 CVLGVISDLGK-RHEEQVQAYAIK-----LLLYNN----------------------NSN 296
            +L     L      +QV  YAI+     L+L N                         +
Sbjct: 473 SILETCCGLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKD 532

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           +V W   ++     G  +GA+  F  M ++N+Q DSV  +  L A+AG  +L  G+Q+HG
Sbjct: 533 IVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHG 592

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
             ++  F     V +SL++MYS  G                            S    + 
Sbjct: 593 FLIRRNFPIEGPVVSSLVDMYSGCG----------------------------SMNYAIR 624

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             +     D  + TA+I+    +G                               +  +A
Sbjct: 625 VFERAKCKDVVLWTAMINATGMHG-------------------------------HGKQA 653

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSS 531
           ++LF  M  +G   D ++    + AC    ++++GK      +  Y +K   E   CV  
Sbjct: 654 IDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACV-- 711

Query: 532 GILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             +D+  + G   +A      +P  P    W  ++  C      +  L++    +L  + 
Sbjct: 712 --VDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGAC--RVHRNYGLAVVAANKLLELE 767

Query: 591 PDEFTFAILV 600
           PD     ILV
Sbjct: 768 PDNPGNYILV 777


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  360 bits (925), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 242/783 (30%), Positives = 366/783 (46%), Gaps = 154/783 (19%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A+ +L     S  V WN  +  +++ G    AI     M+R+  + D  T   AL A   
Sbjct: 102 ALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGE 161

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLI------------------------------ 374
             +   G+ +HG    +GF S V V N+L+                              
Sbjct: 162 LPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISW 221

Query: 375 -----------------NMYSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQ 412
                             ++S+M  +        R+D  ++ ++L A +SL + L   K+
Sbjct: 222 NSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASL-KALPQIKE 280

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH +AI+N T AD+FV  ALID Y + GSM +A  +F   +  D+ +WNAM+ GY  S N
Sbjct: 281 IHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGN 340

Query: 473 -----------------------------------SHKALELFSHMHTSGERLDEITIAT 497
                                              S +AL+ F  M   G   + +TI +
Sbjct: 341 FGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIIS 400

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGF------------ELDLCVSSGILDMYVKCGAMVD 545
            + AC  L  L QG ++HAY++K                 DL V + ++DMY KC +   
Sbjct: 401 LLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKA 460

Query: 546 AQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVK 601
           A+SIF+ IP  +   V WT MI G    G+ + AL I+ +M  +   V P+ +T + ++ 
Sbjct: 461 ARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILM 520

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDP---FVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           A + L AL  G+QIHA + +     +P   FV   L+DMY+KCG+++ A  +F  M  RN
Sbjct: 521 ACAHLAALRMGKQIHAYVTRHH-EYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN 579

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V W +M+ G   HG G+E L +F+ M+  G  PD ++F+ +L ACS++G+V +    F 
Sbjct: 580 EVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFD 639

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
           +MR  Y +    EHY+ ++D L R GR  +A + I  MP E SA +  ALL ACRV  + 
Sbjct: 640 IMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNV 699

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------- 831
           E  ++   KL+ ++  +  +Y L+SNI+A A +W DV   R  MK+  +KK P       
Sbjct: 700 ELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQG 759

Query: 832 ----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                           +  I++ +E LI RIK  GYVP+T+F L DV++EEK   L  HS
Sbjct: 760 KKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHS 819

Query: 876 EKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGM 912
           EKLA AYGL++T P   I   K                           ++RFHH ++G 
Sbjct: 820 EKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGS 879

Query: 913 CPC 915
           C C
Sbjct: 880 CSC 882



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 169/680 (24%), Positives = 308/680 (45%), Gaps = 106/680 (15%)

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           A + + S +  + L   ++  Y  CG+   A  + +++     + WN  L    H  EG+
Sbjct: 72  APLPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWN--LLVREHIKEGH 129

Query: 137 AEN-VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
            +  +    R+ R+     T     TL   LK C           +HG     G   + F
Sbjct: 130 LDRAIGVSCRMLRAG----TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVF 185

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQER---DVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           V  ALV +YS+ G + +A  +FD +  +   DV+ W  ++ A+ +         LF ++ 
Sbjct: 186 VCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS 245

Query: 252 ---------HRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------------- 287
                     RS    D  S+  +L   + L    + +++ +YAI+              
Sbjct: 246 MIVHEKATNERS----DIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALI 301

Query: 288 ------------LLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                       + ++N     +VV WN  ++GY Q G+   A E F NM + N+  D +
Sbjct: 302 DTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVI 361

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
           T+    A +AG       Q+                    ++ + +M  + G   +  T+
Sbjct: 362 TW---SAVIAGYAQRGCSQEA-------------------LDAFQQM-ILDGSEPNSVTI 398

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVA------------DSFVSTALIDVYCRNGS 441
            S+L A +SL   L    +IH +++K   ++            D  V  ALID+Y +  S
Sbjct: 399 ISLLSACASL-GALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRS 457

Query: 442 MAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DEITIAT 497
              A  +F++  +   ++ TW  MI GY    +S+ AL++FS M +    +  +  TI+ 
Sbjct: 458 FKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISC 517

Query: 498 AVKACGCLLMLKQGKQMHAYAMK-SGFELDL-CVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + AC  L  L+ GKQ+HAY  +   +E  +  V++ ++DMY KCG +  A+++F+ +P 
Sbjct: 518 ILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPK 577

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            ++V+WT+M+SG   +G    AL I+ +M+ +G VPD+ +F +L+ A S    ++QG   
Sbjct: 578 RNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLN- 636

Query: 616 HANLIKLD----CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLA 670
           + ++++ D     S++ +  +  +D+ A+CG ++ A+   ++M M  + V+W A+L    
Sbjct: 637 YFDIMRRDYDVVASAEHYACV--IDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACR 694

Query: 671 QHGN---GEETLKLFEDMKA 687
            H N    E  L    +MKA
Sbjct: 695 VHSNVELAEYALNKLVNMKA 714



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 144/579 (24%), Positives = 243/579 (41%), Gaps = 117/579 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G++ H  I  +    + F+ N L+ MYSRCGSL  A  +FD++  +   D+ISWNSI+AA
Sbjct: 168 GRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAA 227

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSR---LTLAPLLKLCLSSGYVWASETVHGYA 185
             H    N     E F     +        R   +++  +L  C S   +   + +H YA
Sbjct: 228 --HVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYA 285

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           ++ G   D FV  AL++ Y+K G + +A  +F+ M+ +DVV W  M+  Y ++G     F
Sbjct: 286 IRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAF 345

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LF ++ +  + P D                                    V+ W+  ++
Sbjct: 346 ELFENMRKENI-PLD------------------------------------VITWSAVIA 368

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY Q G +  A++ F  MI    + +SVT +  L+A A    L+ G +IH  +LK    S
Sbjct: 369 GYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLS 428

Query: 366 ------------AVIVGNSLINMYSKMGCVCGLRT------------------------- 388
                        ++V N+LI+MYSK       R+                         
Sbjct: 429 LDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQY 488

Query: 389 ----------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                                 + +T++ +L A + L   L + KQIH +  ++     S
Sbjct: 489 GDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHL-AALRMGKQIHAYVTRHHEYEPS 547

Query: 427 --FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
             FV+  LID+Y + G +  A  +F++    +  +W +M+ GY +     +AL++F  M 
Sbjct: 548 VYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQ 607

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVK 539
            +G   D+I+    + AC    M+ QG          Y + +  E   CV    +D+  +
Sbjct: 608 KAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACV----IDLLAR 663

Query: 540 CGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           CG +  A     ++P  P  V W  ++S C  +   +LA
Sbjct: 664 CGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELA 702



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 10/339 (2%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V+   + T ++  Y   G+  +A  + E         WN ++  +I   +  +A+ +   
Sbjct: 80  VSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCR 139

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M  +G + D  T+  A+KACG L     G+ +H     +GFE ++ V + ++ MY +CG+
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGS 199

Query: 543 MVDAQSIFNDIPAP---DDVAWTTMISGCVDNGEEDLALSIYHQMRL------SGVVPDE 593
           + DA  +F++I      D ++W ++++  V       AL ++ +M +      +    D 
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDI 259

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            +   ++ A + L AL Q ++IH+  I+    +D FV  +L+D YAKCG++ DA  +F  
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M+ ++ V WNAM+ G  Q GN     +LFE+M+   +  D +T+  V++  +  G   EA
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
            + F  M    G EP       L+ A    G   +  E+
Sbjct: 380 LDAFQQMILD-GSEPNSVTIISLLSACASLGALSQGMEI 417


>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 688

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 226/689 (32%), Positives = 354/689 (51%), Gaps = 37/689 (5%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +A  L+ C +         +H Y  K G + D F++  L+++Y++F  +R+A+ +FD M 
Sbjct: 6   IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHE 278
           +R++V W  M+ A+ + G   E   L+ D+ +S   P+      VL   G + DLG    
Sbjct: 66  DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVGDLGLGKL 124

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
            Q + Y  KL      ++ +L N  +  +++ G  + A+E F N+ R+     + T+ + 
Sbjct: 125 IQERIYEDKL-----QADTILMNSLMDMFVKCGSLNDAVEVFHNISRAT----TTTWNII 175

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCVCGL----------- 386
           ++  +       G  +    L     +  V+  NS+I  ++  G    L           
Sbjct: 176 VSGYSKA-----GLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCI 230

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           + D FT    L+ S+ L   L + KQ+H +  K    +  F  +ALID+Y     + EA 
Sbjct: 231 KLDDFTFPCALKISA-LHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAV 289

Query: 447 YLFENKDGFD------LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            LF+    F+      LA WN+M+ GY+++N    AL L S +H SG  LD  T   A+K
Sbjct: 290 KLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALK 349

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
            C  LL  + G Q+H   +  G+ELD  V S ++D+Y K   + DA +IF+ +P  D +A
Sbjct: 350 VCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIA 409

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W+ +I GC   G   LA S++  M       D F  + ++K  S L +L  G+Q+HA  +
Sbjct: 410 WSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCV 469

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           K     + F   SL+DMY+KCG IEDA  LF     ++ V W  ++VG  Q+G   E ++
Sbjct: 470 KSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVR 529

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
            F +M   G+ P+ +TF+GVLSAC Y GLV EA   F+ M+  YG+EP +EHY  +VD L
Sbjct: 530 FFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLL 589

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
              G  +EA +LI +MPFE + +  R LLGAC  + DT+    VA+ L+   P D S YV
Sbjct: 590 ASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYV 649

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            LSN +A+   W  ++ AR   K+  +KK
Sbjct: 650 TLSNAYASLGMWHTLSKAREASKKFGIKK 678



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 147/625 (23%), Positives = 256/625 (40%), Gaps = 129/625 (20%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           LRH  +      G + HA +     + D FL NNL++MY+   ++  A ++FD+M DR++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT--------------FTSRLTLAPL 165
           ++W ++++A+   G        E  RL+  + +S T              F   L L  L
Sbjct: 70  VTWTTMVSAFTDGGRP-----YEAIRLYNDMPKSETPNGYMYSAVLKACGFVGDLGLGKL 124

Query: 166 LK--------------------LCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIY 204
           ++                    + +  G +  A E  H  +      W+  VSG     Y
Sbjct: 125 IQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSG-----Y 179

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           SK G + EA+ LF  M   +VV W  M+  +A+NG  +        +H+  +  DD +  
Sbjct: 180 SKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNG-SQRALEFVSMMHKRCIKLDDFTFP 238

Query: 265 CVLGVISDLGKRH-EEQVQAYAIKLL-------------LYNN----------------- 293
           C L + +  G     +QV +Y  KL              +Y+N                 
Sbjct: 239 CALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSF 298

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + N+ LWN  LSGY+    +  A+     +  S    DS TF  AL       +  
Sbjct: 299 NASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRR 358

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------------MGCV 383
           +G Q+HG  +  G+    +VG+ L+++Y+K                          MGC 
Sbjct: 359 VGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCA 418

Query: 384 -CGL----------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
             GL                  D F ++++L+  S+L   L   KQ+H   +K+    + 
Sbjct: 419 QIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLAS-LRSGKQVHALCVKSGYEMEG 477

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F  T+L+D+Y + G + +A  LF  +   D+ +W  +I G   +  + +A+  F  M  S
Sbjct: 478 FTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRS 537

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMV 544
           G   +EIT    + AC    ++++ + +   +MKS  G E  L     ++D+    G   
Sbjct: 538 GITPNEITFLGVLSACRYAGLVEEARSIFN-SMKSVYGLEPHLEHYCCMVDLLASVGLPE 596

Query: 545 DAQSIFNDIP-APDDVAWTTMISGC 568
           +A+ +  ++P  P+   W T++  C
Sbjct: 597 EAEKLIANMPFEPNQTTWRTLLGAC 621



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 9/234 (3%)

Query: 39  LPFLQKSHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           L  L + H S +   S  F   L+  I+     +G   H  I+      D  + + L+ +
Sbjct: 326 LNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDL 385

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           Y++  ++  A  +F ++P +D+I+W+ ++   A  G          F +F+ + E +   
Sbjct: 386 YAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLN-----WLAFSMFKGMLELVNEI 440

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
               ++ +LK+C +   + + + VH   +K G   + F   +L+++YSK G+I +A  LF
Sbjct: 441 DHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLF 500

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
              QE+D+V W  ++    +NG   E    F ++ RSG+ P++ +    LGV+S
Sbjct: 501 CCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEIT---FLGVLS 551


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 214/652 (32%), Positives = 347/652 (53%), Gaps = 63/652 (9%)

Query: 322 NMIRSNVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYS--AVIVGNSLINM- 376
            M+R+ + +D  T   +VA  ++  + +L   + +         Y+  ++I G +  N+ 
Sbjct: 10  QMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLH 69

Query: 377 ------YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                 Y +M  V GL  D++T  S+ ++  +  EG    KQIH H+ K    +D++   
Sbjct: 70  QEALLFYQEM-MVQGLIPDRYTFPSLFKSCRNSSEG----KQIHCHSTKLGFASDTYAQN 124

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-R 489
            L+++Y   G +  A  +F+  +   + +W  MI  +   +  ++A+ LF  M  S   +
Sbjct: 125 TLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVK 184

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            +E+T+   + AC     L   K++H Y  + GF   + +++ ++D+Y KCG +  A+ +
Sbjct: 185 PNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDL 244

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+     +  +W  MI+G V++   + AL ++ +M+  G+  D+ T A L+ A + L AL
Sbjct: 245 FDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGAL 304

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           E G+ +HA + K     D  +G +LVDMYAKCG+IE A  +F +M  ++ + W A+++GL
Sbjct: 305 ELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGL 364

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           A  G  E  L+ F++M   GV+PD++TF+GVL+ACS+ G V E   +F+ M + YGI+P 
Sbjct: 365 AMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPT 424

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +EHY  LVD LGRAGR  EA ELI SMP      +   LLGACR+ G+ E  +  A++L+
Sbjct: 425 IEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLL 484

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
            ++P+ S  YVLLSNI+ ++ +W++    R  M  + ++K P                  
Sbjct: 485 EIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGD 544

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                +  I   +E +I ++K  GYVPD   VL D+ EEEKE  L  HSEKLA A+GL+S
Sbjct: 545 SSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLS 604

Query: 887 TP---PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPC 915
           T    P  V+                  L N+E +    NRFHH +DG C C
Sbjct: 605 TSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSC 656



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 7/248 (2%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDM--YVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           + Q KQ+HA  +++G   D   +S I+      + G++  A+ +F+ IP P      ++I
Sbjct: 1   MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            GC D      AL  Y +M + G++PD +TF  L K  SC  + E G+QIH +  KL  +
Sbjct: 61  RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFK--SCRNSSE-GKQIHCHSTKLGFA 117

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED- 684
           SD +   +L++MY+ CG +  A  +F +M+ +  V W  M+   AQ     E ++LF+  
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           MK+  V+P+ VT + VL+AC+    ++   +  H   +++G    V   + L+D   + G
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLA-MVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCG 236

Query: 745 RTKEAGEL 752
             + A +L
Sbjct: 237 CVQLARDL 244



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/540 (21%), Positives = 209/540 (38%), Gaps = 103/540 (19%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYS--RCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA++L +    D F  + ++   S    GSL YAR +F ++P+    + NSI+    
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII---- 60

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G  +     E    ++ +        R T   L K C +S      + +H ++ K+G 
Sbjct: 61  -RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGF 116

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D +    L+N+YS  G +  A+ +FD M+++ VV W  M+  +A+     E   LF  
Sbjct: 117 ASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDR 176

Query: 251 LHRS-GLCPDDESVQCVLGVIS---DLG--KRHEEQVQAY-------------------- 284
           + +S  + P++ ++  VL   +   DL   KR  E +  +                    
Sbjct: 177 MMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCG 236

Query: 285 ----AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
               A  L       N+  WN  ++G+++  +   A+  F  M    ++ D VT    L 
Sbjct: 237 CVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLL 296

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A      L LG+ +H    K      V +G +L++MY+K G          ++ + ++  
Sbjct: 297 ACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCG----------SIETAIQVF 346

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             +PE                                              KD   + TW
Sbjct: 347 HEMPE----------------------------------------------KD---VMTW 357

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            A+I G  +   +  AL+ F  MH  G + D IT    + AC     + +G   H  +M 
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGIS-HFNSMS 416

Query: 521 SGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             + +   +    G++D+  + G + +A+ +   +P APD      ++  C  +G  + A
Sbjct: 417 DTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAA 476



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 35/302 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H          D +  N LM MYS CG LV AR++FDKM D+ ++SW +++  +A 
Sbjct: 104 GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQ 163

Query: 132 SGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             + N     E  RLF R ++      + +TL  +L  C  +  +   + +H Y  + G 
Sbjct: 164 WDQPN-----EAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGF 218

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
                ++  L+++Y K G ++ A+ LFD  QE+++  W +M+  + E+   EE   LF +
Sbjct: 219 GRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFRE 278

Query: 251 LHRSGLCPDDESVQCVLGVISDLG------------KRHEEQVQA--------------- 283
           +   G+  D  ++  +L   + LG            K+    V                 
Sbjct: 279 MQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGS 338

Query: 284 --YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
              AI++       +V+ W   + G    G    A++ F  M    V+ D++TF+  LAA
Sbjct: 339 IETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398

Query: 342 VA 343
            +
Sbjct: 399 CS 400



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L       DL + K  H  I          L   LM +Y +CG +  AR LFDK  ++
Sbjct: 192 NVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEK 251

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L SWN ++     +G     N  E   LFR ++       ++T+A LL  C   G +  
Sbjct: 252 NLFSWNIMI-----NGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALEL 306

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y  K  +  D  +  ALV++Y+K G I  A  +F  M E+DV+ W  ++   A 
Sbjct: 307 GKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAM 366

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            G  E     F ++H  G+ PD  +   VL   S  G
Sbjct: 367 CGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAG 403


>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 680

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 226/689 (32%), Positives = 354/689 (51%), Gaps = 37/689 (5%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +A  L+ C +         +H Y  K G + D F++  L+++Y++F  +R+A+ +FD M 
Sbjct: 6   IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHE 278
           +R++V W  M+ A+ + G   E   L+ D+ +S   P+      VL   G + DLG    
Sbjct: 66  DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVGDLGLGKL 124

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
            Q + Y  KL      ++ +L N  +  +++ G  + A+E F N+ R+     + T+ + 
Sbjct: 125 IQERIYEDKL-----QADTILMNSLMDMFVKCGSLNDAVEVFHNISRAT----TTTWNII 175

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCVCGL----------- 386
           ++  +       G  +    L     +  V+  NS+I  ++  G    L           
Sbjct: 176 VSGYSKA-----GLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCI 230

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           + D FT    L+ S+ L   L + KQ+H +  K    +  F  +ALID+Y     + EA 
Sbjct: 231 KLDDFTFPCALKISA-LHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAV 289

Query: 447 YLFENKDGFD------LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            LF+    F+      LA WN+M+ GY+++N    AL L S +H SG  LD  T   A+K
Sbjct: 290 KLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALK 349

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
            C  LL  + G Q+H   +  G+ELD  V S ++D+Y K   + DA +IF+ +P  D +A
Sbjct: 350 VCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIA 409

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W+ +I GC   G   LA S++  M       D F  + ++K  S L +L  G+Q+HA  +
Sbjct: 410 WSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCV 469

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           K     + F   SL+DMY+KCG IEDA  LF     ++ V W  ++VG  Q+G   E ++
Sbjct: 470 KSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVR 529

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
            F +M   G+ P+ +TF+GVLSAC Y GLV EA   F+ M+  YG+EP +EHY  +VD L
Sbjct: 530 FFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLL 589

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
              G  +EA +LI +MPFE + +  R LLGAC  + DT+    VA+ L+   P D S YV
Sbjct: 590 ASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYV 649

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            LSN +A+   W  ++ AR   K+  +KK
Sbjct: 650 TLSNAYASLGMWHTLSKAREASKKFGIKK 678



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 147/625 (23%), Positives = 256/625 (40%), Gaps = 129/625 (20%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           LRH  +      G + HA +     + D FL NNL++MY+   ++  A ++FD+M DR++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT--------------FTSRLTLAPL 165
           ++W ++++A+   G        E  RL+  + +S T              F   L L  L
Sbjct: 70  VTWTTMVSAFTDGGRP-----YEAIRLYNDMPKSETPNGYMYSAVLKACGFVGDLGLGKL 124

Query: 166 LK--------------------LCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIY 204
           ++                    + +  G +  A E  H  +      W+  VSG     Y
Sbjct: 125 IQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSG-----Y 179

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           SK G + EA+ LF  M   +VV W  M+  +A+NG  +        +H+  +  DD +  
Sbjct: 180 SKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNG-SQRALEFVSMMHKRCIKLDDFTFP 238

Query: 265 CVLGVISDLGKRH-EEQVQAYAIKLL-------------LYNN----------------- 293
           C L + +  G     +QV +Y  KL              +Y+N                 
Sbjct: 239 CALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSF 298

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + N+ LWN  LSGY+    +  A+     +  S    DS TF  AL       +  
Sbjct: 299 NASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRR 358

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------------MGCV 383
           +G Q+HG  +  G+    +VG+ L+++Y+K                          MGC 
Sbjct: 359 VGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCA 418

Query: 384 -CGL----------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
             GL                  D F ++++L+  S+L   L   KQ+H   +K+    + 
Sbjct: 419 QIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLAS-LRSGKQVHALCVKSGYEMEG 477

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F  T+L+D+Y + G + +A  LF  +   D+ +W  +I G   +  + +A+  F  M  S
Sbjct: 478 FTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRS 537

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMV 544
           G   +EIT    + AC    ++++ + +   +MKS  G E  L     ++D+    G   
Sbjct: 538 GITPNEITFLGVLSACRYAGLVEEARSIFN-SMKSVYGLEPHLEHYCCMVDLLASVGLPE 596

Query: 545 DAQSIFNDIP-APDDVAWTTMISGC 568
           +A+ +  ++P  P+   W T++  C
Sbjct: 597 EAEKLIANMPFEPNQTTWRTLLGAC 621



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 9/234 (3%)

Query: 39  LPFLQKSHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           L  L + H S +   S  F   L+  I+     +G   H  I+      D  + + L+ +
Sbjct: 326 LNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDL 385

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           Y++  ++  A  +F ++P +D+I+W+ ++   A  G          F +F+ + E +   
Sbjct: 386 YAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLN-----WLAFSMFKGMLELVNEI 440

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
               ++ +LK+C +   + + + VH   +K G   + F   +L+++YSK G+I +A  LF
Sbjct: 441 DHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLF 500

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
              QE+D+V W  ++    +NG   E    F ++ RSG+ P++ +    LGV+S
Sbjct: 501 CCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEIT---FLGVLS 551


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/555 (37%), Positives = 315/555 (56%), Gaps = 48/555 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK   +   ++ST LI +Y +   +  A ++F+     ++ +W AMI GY   
Sbjct: 30  QRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQR 89

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             + +AL LF  M  S    +E T AT + +C      + G+Q+H++  K  +E  + V 
Sbjct: 90  GFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVG 149

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K G + +A+ +F  +P  D V+ T +ISG    G ++ AL ++ +++  G+ 
Sbjct: 150 SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMS 209

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  T+A L+ A S L AL+ G+Q+H+++++ +      +  SL+DMY+KCGN+  A  +
Sbjct: 210 SNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKI 269

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F  M +R  + WNAMLVG ++HG G E +KLF+ M+    V+PDSVTF+ VLS CS+ GL
Sbjct: 270 FNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGL 329

Query: 710 VSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
             +  E F  +M     IE  +EHY  ++D LGRAGR +EA ELI  MPFE +A++  +L
Sbjct: 330 EDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSL 389

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGACRV  +T  G++V  +L+ +EP ++  YV+LSN++A+A +W+DV + R  M  K V 
Sbjct: 390 LGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVI 449

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                        + +F KV  L+ + KE GYVPD   VL DV+EE
Sbjct: 450 KEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEE 509

Query: 866 EKERALYYHSEKLARAYGLISTP---PSSVILSNK------------EPLYA-------- 902
           +KE+ L  HSEKLA A+GLIST    P  VI + +              +Y         
Sbjct: 510 QKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDK 569

Query: 903 NRFHHLRDGMCPCAD 917
           NRFHH+  G+C C D
Sbjct: 570 NRFHHVAGGICSCGD 584



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 148/264 (56%), Gaps = 3/264 (1%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           +++G+++HA+ +K+ +   + +S+ ++ +Y KC  +  A+ +F+++   + V+WT MISG
Sbjct: 26  VREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISG 85

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G    AL ++ QM  S   P+EFTFA ++ + +  +  E GRQIH+++ K +  + 
Sbjct: 86  YSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENH 145

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FVG SL+DMYAK G I +A  +F+ +  R+ V   A++ G AQ G  EE L+LF  ++ 
Sbjct: 146 IFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQR 205

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            G+  + VT+  +L+A S    +    + + H++R +      +++   L+D   + G  
Sbjct: 206 EGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS--LIDMYSKCGNL 263

Query: 747 KEAGELILSMPFEASASMHRALLG 770
             A ++  +MP     S +  L+G
Sbjct: 264 NYARKIFNNMPVRTVISWNAMLVG 287



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 180/401 (44%), Gaps = 54/401 (13%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-CG------------------------ 385
           GQ++H   +K+ +   V +   LI +Y+K  C+ C                         
Sbjct: 29  GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88

Query: 386 --------------LRTD----QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                         LR+D    +FT A+VL + +    G  L +QIH H  K +     F
Sbjct: 89  RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFS-GFELGRQIHSHIFKRNYENHIF 147

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V ++L+D+Y + G + EA  +FE     D+ +  A+I GY       +ALELF  +   G
Sbjct: 148 VGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREG 207

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              + +T A+ + A   L  L  GKQ+H++ ++      + + + ++DMY KCG +  A+
Sbjct: 208 MSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYAR 267

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCL 606
            IFN++P    ++W  M+ G   +G+    + ++  MR    V PD  TF  ++   S  
Sbjct: 268 KIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHG 327

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQMDMRNT-VL 661
              ++G ++   +  ++   +   GI     ++D+  + G +E+A+ L K+M    T  +
Sbjct: 328 GLEDKGLEMFDEM--MNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAI 385

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           W ++L     H N    +  F   +   +EP++     +LS
Sbjct: 386 WGSLLGACRVHSN--TNIGEFVGCRLLEIEPENAGNYVILS 424



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 35/315 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L   ++   +  G+  HA ++ +  +P  +L+  L+ +Y++C  L  AR +FD+M +R+
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW ++++ Y+  G       +E   LF  +  S T  +  T A +L  C         
Sbjct: 76  VVSWTAMISGYSQRG-----FASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H +  K       FV  +L+++Y+K G+I EA+ +F+ + ERDVV    ++  YA+ 
Sbjct: 131 RQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 190

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLL------- 290
           G  EE   LF  L R G+  +  +   +L  +S L    H +QV ++ ++  L       
Sbjct: 191 GLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQ 250

Query: 291 -------------------YNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-V 328
                              +NN     V+ WN  L GY + G     ++ F  M   N V
Sbjct: 251 NSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKV 310

Query: 329 QYDSVTFLVALAAVA 343
           + DSVTFL  L+  +
Sbjct: 311 KPDSVTFLAVLSGCS 325



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 48/320 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +SGY Q G    A+  FV M+RS+ + +  TF   L++  G     LG+QIH
Sbjct: 75  NVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIH 134

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV--------C----------------------- 384
               K  + + + VG+SL++MY+K G +        C                       
Sbjct: 135 SHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 194

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G+ ++  T AS+L A S L   L   KQ+H H ++ +      +  +L
Sbjct: 195 EALELFCRLQREGMSSNYVTYASLLTALSGLA-ALDHGKQVHSHVLRCELPFYVVLQNSL 253

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           ID+Y + G++  A  +F N     + +WNAM+ GY       + ++LF  M    + + D
Sbjct: 254 IDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPD 313

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSI 549
            +T    +  C    +  +G +M    M  G E++  +     ++D+  + G + +A  +
Sbjct: 314 SVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFEL 373

Query: 550 FNDIP-APDDVAWTTMISGC 568
              +P  P    W +++  C
Sbjct: 374 IKKMPFEPTAAIWGSLLGAC 393



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R   S +L L  F+Q     +  +   + ++L      S   LG+  H+ I   +     
Sbjct: 89  RGFASEALHL--FVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHI 146

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F+ ++L+ MY++ G +  AR +F+ +P+RD++S  +I++ YA  G        E   LF 
Sbjct: 147 FVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE-----EALELFC 201

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            L+     ++ +T A LL        +   + VH + L+  L +   +  +L+++YSK G
Sbjct: 202 RLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCG 261

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            +  A+ +F+ M  R V+ W  ML  Y+++G G EV  LF
Sbjct: 262 NLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLF 301



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 5/152 (3%)

Query: 608 ALEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           A+ +G+++HA++IK  C   P ++   L+ +Y KC  +  A  +F +M  RN V W AM+
Sbjct: 25  AVREGQRVHAHMIK-TCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMI 83

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS-YTGLVSEAYENFHLMREKYG 725
            G +Q G   E L LF  M     EP+  TF  VLS+C+ ++G       + H+ +  Y 
Sbjct: 84  SGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNY- 142

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            E  +   S L+D   +AGR  EA  +   +P
Sbjct: 143 -ENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 196/551 (35%), Positives = 298/551 (54%), Gaps = 47/551 (8%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H H +++    D  +   L+++Y + GS+ EA  +FE     D  TW  +I GY   + 
Sbjct: 82  VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
              AL  F+ M   G   +E T+++ +KA         G Q+H + +K GF+ ++ V S 
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +LD+Y + G M DAQ +F+ + + +DV+W  +I+G       + AL ++  M   G  P 
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            F++A L  A S    LEQG+ +HA +IK       F G +L+DMYAK G+I DA  +F 
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           ++  R+ V WN++L   AQHG G+E +  FE+M+  G+ P+ ++F+ VL+ACS++GL+ E
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            +  + LM+ K GI PE  HY  +VD LGRAG    A   I  MP E +A++ +ALL AC
Sbjct: 382 GWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           R+  +TE G + AE +  L+P D   +V+L NI+A+  +W+D    R +MK   VKK+PA
Sbjct: 441 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 500

Query: 833 -----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                  + I  K E ++ +IKE GYVPDT  V++ V+++E+E 
Sbjct: 501 CSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREV 560

Query: 870 ALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFH 906
            L YHSEK+A A+ L++TPP S I   K                            NRFH
Sbjct: 561 NLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFH 620

Query: 907 HLRDGMCPCAD 917
           H +DG C C D
Sbjct: 621 HFKDGNCSCKD 631



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 182/370 (49%), Gaps = 45/370 (12%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+ +H   L+S F   +++GN+L+NMY+K G +                           
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 384 ----C------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
               C            G   ++FTL+SV++A+++   G     Q+H   +K    ++  
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC-CGHQLHGFCVKCGFDSNVH 197

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V +AL+D+Y R G M +A+ +F+  +  +  +WNA+I G+   + + KALELF  M   G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R    + A+   AC     L+QGK +HAY +KSG +L     + +LDMY K G++ DA+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            IF+ +   D V+W ++++    +G    A+  + +MR  G+ P+E +F  ++ A S   
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAML 666
            L++G   +  + K     + +  +++VD+  + G++  A    ++M +  T  +W A+L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 667 VGLAQHGNGE 676
                H N E
Sbjct: 438 NACRMHKNTE 447



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 125/217 (57%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T +K C    +L QG+ +HA+ ++S F  D+ + + +L+MY KCG++ +A+ +F  +P  
Sbjct: 65  TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V WTT+ISG   +     AL  ++QM   G  P+EFT + ++KA++       G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
              +K    S+  VG +L+D+Y + G ++DA ++F  ++ RN V WNA++ G A+    E
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           + L+LF+ M   G  P   ++  +  ACS TG + + 
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 34/342 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ G+  HA IL S    D  + N L+ MY++CGSL  AR++F+KMP RD ++W ++++ 
Sbjct: 76  LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y+       +   +    F  +       +  TL+ ++K   +         +HG+ +K 
Sbjct: 136 YSQH-----DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   +  V  AL+++Y+++G + +A+ +FD ++ R+ V W  ++  +A     E+   LF
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI----KLLLYNNNS-------- 295
             + R G  P   S   + G  S  G   + + V AY I    KL+ +  N+        
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310

Query: 296 ----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           +VV WN  L+ Y Q G    A+  F  M R  ++ + ++FL  L
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            A + +  L+ G   +    K G         +++++  + G
Sbjct: 371 TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 5/238 (2%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +LL F Q   F  S +     S+++ A +      G   H   +      +  + + L+ 
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           +Y+R G +  A+ +FD +  R+ +SWN+++A +A           +   LF+ +      
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS-----GTEKALELFQGMLRDGFR 259

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            S  + A L   C S+G++   + VH Y +K G     F    L+++Y+K G I +A+ +
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           FD + +RDVV W  +L AYA++GFG+E    F ++ R G+ P++ S   VL   S  G
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 161/436 (36%), Gaps = 93/436 (21%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LLK C     +     VH + L+     D  +   L+N+Y+K G + EA+ +F+ M +RD
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---EQV 281
            V W  ++  Y+++    +    F  + R G  P++ ++  V+   +   +R      Q+
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGCCGHQL 183

Query: 282 QAYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDN 313
             + +K             L LY                 + N V WN  ++G+ +    
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+E F  M+R   +    ++     A + T  L  G+ +H   +KSG       GN+L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++MY+K G +                        H +++I     K D V          
Sbjct: 304 LDMYAKSGSI------------------------HDARKIFDRLAKRDVV---------- 329

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
                                    +WN+++  Y       +A+  F  M   G R +EI
Sbjct: 330 -------------------------SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           +  + + AC    +L +G   +    K G   +      ++D+  + G +  A     ++
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424

Query: 554 P-APDDVAWTTMISGC 568
           P  P    W  +++ C
Sbjct: 425 PIEPTAAIWKALLNAC 440



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           S +  D   +  L+K  +    L QGR +HA++++     D  +G +L++MYAKCG++E+
Sbjct: 54  SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA--- 703
           A  +F++M  R+ V W  ++ G +QH    + L  F  M   G  P+  T   V+ A   
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173

Query: 704 -------------CSYTGLVSEAYENFHLMR--EKYGIEPEVE------------HYSFL 736
                        C   G  S  +    L+    +YG+  + +             ++ L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233

Query: 737 VDALGRAGRTKEAGELILSM---PFEASASMHRALLGACRVQGDTETGKWV-------AE 786
           +    R   T++A EL   M    F  S   + +L GAC   G  E GKWV        E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293

Query: 787 KLMAL 791
           KL+A 
Sbjct: 294 KLVAF 298


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 236/774 (30%), Positives = 362/774 (46%), Gaps = 144/774 (18%)

Query: 283 AYAIKLL--LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           ++A+ LL     +++ V  WN  +  Y   G  +  +  F  M   +   D+ TF     
Sbjct: 76  SHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFK 135

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------- 384
           A     ++  G   H  +  +GF S V VGN+L+ MYS+ G +                 
Sbjct: 136 ACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVS 195

Query: 385 ----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                                       G R D  TL +VL   +S+     L KQ H  
Sbjct: 196 WNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT-RSLGKQFHGF 254

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           A+ ++ + + FV   L+D+Y + G M EA  +F N    D+ +WNAM+ GY        A
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDA 314

Query: 477 LELFSHMH-----------------------------------TSGERLDEITIATAVKA 501
           + LF  M                                    +SG + +E+T+ + +  
Sbjct: 315 VRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDL---------CVSSGILDMYVKCGAMVDAQSIFND 552
           C  +  L  GK++H YA+K  + +DL          V + ++DMY KC  +  A+++F+ 
Sbjct: 375 CASVGALMHGKEIHCYAIK--YPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDS 432

Query: 553 IPAP--DDVAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKASSCLTA 608
           +     D V WT MI G   +G+ + AL +  +M        P+ FT +  + A + L A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492

Query: 609 LEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           L  G+QIHA  ++   ++ P FV   L+DMYAKCG+I DA ++F  M  +N V W +++ 
Sbjct: 493 LSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMT 552

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G   HG GEE L +FE+M+  G + D VT + VL ACS++G++ +  E F+ M+  +G+ 
Sbjct: 553 GYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVS 612

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P  EHY+ LVD LGRAGR   A  LI  MP E    +  ALL  CR+ G  E G++ A+K
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKK 672

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------- 831
           +  L   +  +Y LLSN++A A +W DVT  R  M+ K +KK P                
Sbjct: 673 ITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFV 732

Query: 832 -------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  A  I+  +   ++RIK+ GYVP+T F L DV++EEK+  L+ HSEKLA AYG+
Sbjct: 733 GDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           ++TP  + I   K                           ++RFHH ++G+C C
Sbjct: 793 LTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSC 846



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 180/634 (28%), Positives = 297/634 (46%), Gaps = 77/634 (12%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRD--LISWNSILAAYAHSGEGNAENVTEGFRLF 147
           LT++L++ Y   G L +A  L  + P  D  +  WNS++ +Y ++G  N       F L 
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRAN--KCLSSFCLM 118

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
            SL  +       T   + K C     V   ++ H  +   G + + FV  ALV +YS+ 
Sbjct: 119 HSLSWT---PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRC 175

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL-HRSGLCPDDESVQCV 266
           G + +A+ +FD M   DVV W  ++ +YA+ G  +    +F  + +  G  PDD ++  V
Sbjct: 176 GSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNV 235

Query: 267 LGVISDLGKRH-EEQVQAYAIKLLLYNNN----------------------------SNV 297
           L   + +G R   +Q   +A+   +  N                              +V
Sbjct: 236 LPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDV 295

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  ++GY Q+G    A+  F  M    ++ D VT+    AA++G     LG      
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTW---SAAISGYAQRGLG------ 346

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                 Y A+ V   +++         G++ ++ TL SVL   +S+   +H  K+IH +A
Sbjct: 347 ------YEALGVCRQMLS--------SGIKPNEVTLISVLSGCASVGALMH-GKEIHCYA 391

Query: 418 I-------KNDTVADSFVSTALIDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           I       KN    ++ V   LID+Y  C+   +A A +   +    D+ TW  MI GY 
Sbjct: 392 IKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYS 451

Query: 469 LSNNSHKALELFSHM--HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE-L 525
              +++KALEL S M       R +  TI+ A+ AC  L  L  GKQ+HAYA+++    +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV 511

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
            L VS+ ++DMY KCG + DA+ +F+++   ++V WT++++G   +G  + AL I+ +MR
Sbjct: 512 PLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR 571

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD--CSSDPFVGISLVDMYAKCGN 643
             G   D  T  +++ A S    ++QG + + N +K D   S  P     LVD+  + G 
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGME-YFNRMKTDFGVSPGPEHYACLVDLLGRAGR 630

Query: 644 IEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +  A  L ++M M    V+W A+L     HG  E
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE 664



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/574 (27%), Positives = 256/574 (44%), Gaps = 111/574 (19%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S +  G S+HA    +  + + F+ N L+ MYSRCGSL  AR++FD+MP  D++SWNSI+
Sbjct: 141 SSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSII 200

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLCLSSGYVWASETVHGYA 185
            +YA  G+           +F  +     F    +TL  +L  C S G     +  HG+A
Sbjct: 201 ESYAKLGKPKM-----ALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFA 255

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +   ++ + FV   LV++Y+KFG + EA  +F  M  +DVV W  M+  Y++ G  E+  
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAV 315

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LF                              EQ+Q   IK+       +VV W+  +S
Sbjct: 316 RLF------------------------------EQMQEEKIKM-------DVVTWSAAIS 338

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL------ 359
           GY Q G  + A+     M+ S ++ + VT +  L+  A    L  G++IH   +      
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDL 398

Query: 360 -KSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
            K+G     +V N LI+MY+K   V                                   
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458

Query: 384 ------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS-FVST 430
                       C  R + FT++  L A +SL   L + KQIH +A++N   A   FVS 
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASL-AALSIGKQIHAYALRNQQNAVPLFVSN 517

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            LID+Y + G + +A  +F+N    +  TW +++ GY +     +AL +F  M   G +L
Sbjct: 518 CLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKL 577

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG------ILDMYVKCGAMV 544
           D +T+   + AC    M+ QG + +   MK+    D  VS G      ++D+  + G + 
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGME-YFNRMKT----DFGVSPGPEHYACLVDLLGRAGRLN 632

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            A  +  ++P  P  V W  ++S C  +G+ +L 
Sbjct: 633 AALRLIEEMPMEPPPVVWVALLSCCRIHGKVELG 666



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 157/306 (51%), Gaps = 8/306 (2%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLAT--WNAMIFGYILSNNSHKALELFSHMHT 485
           +++ LI  Y   G ++ A  L       D     WN++I  Y  +  ++K L  F  MH+
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
                D  T     KACG +  ++ G   HA +  +GF  ++ V + ++ MY +CG++ D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASS 604
           A+ +F+++P  D V+W ++I      G+  +AL ++ +M    G  PD+ T   ++   +
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            +     G+Q H   +  +   + FVG  LVDMYAK G +++A  +F  M +++ V WNA
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE-- 722
           M+ G +Q G  E+ ++LFE M+   ++ D VT+   +S  +  GL    YE   + R+  
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL---GYEALGVCRQML 357

Query: 723 KYGIEP 728
             GI+P
Sbjct: 358 SSGIKP 363



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 156/373 (41%), Gaps = 83/373 (22%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S     LGK  H   + S  I + F+ N L+ MY++ G +  A  +F  MP +
Sbjct: 234 NVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK 293

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES------ITFTS------------- 158
           D++SWN+++A Y+  G        +  RLF  ++E       +T+++             
Sbjct: 294 DVVSWNAMVAGYSQIGR-----FEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYE 348

Query: 159 ----------------RLTLAPLLKLCLSSGYVWASETVHGYALKI-------GLVWDEF 195
                            +TL  +L  C S G +   + +H YA+K        G   +  
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENM 408

Query: 196 VSGALVNIYSKFGKIREAKFLFDGM--QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
           V   L+++Y+K  K+  A+ +FD +  +ERDVV W VM+  Y+++G   +   L  ++  
Sbjct: 409 VINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468

Query: 254 SGLC---PDDESVQCVLGVISDLGKRH-EEQVQAYAIK---------------------- 287
              C   P+  ++ C L   + L      +Q+ AYA++                      
Sbjct: 469 ED-CQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527

Query: 288 -----LLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                 L+++N    N V W   ++GY   G    A+  F  M R   + D VT LV L 
Sbjct: 528 DIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLY 587

Query: 341 AVAGTDNLNLGQQ 353
           A + +  ++ G +
Sbjct: 588 ACSHSGMIDQGME 600


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 238/850 (28%), Positives = 401/850 (47%), Gaps = 125/850 (14%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           D+ +   ++ +Y+  G   +++F+FD ++ +++  W  ++ +Y+ N   +EV   F+++ 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178

Query: 252 HRSGLCPDDESVQCVLGV---ISDLG---KRHEEQVQAYAIKLLLYNN------------ 293
             + L PD  +  CV+     +SD+G     H   V+   ++ +   N            
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN----VQYDSVTFLVA 338
                        N+V WN  +  +   G +  +      M+  N       D  T +  
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------- 388
           L   A    + LG+ +HG  +K      +++ N+L++MYSK GC+   +           
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358

Query: 389 --------------DQFTLASVLRAS---------------SSLPEGLHLS-----KQIH 414
                         D      VLR                 +++P   H S     K++H
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            +++K + V +  V+ A +  Y + GS++ A+ +F       + +WNA+I G+  SN+  
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            +L+    M  SG   D  T+ + + AC  L  L+ GK++H + +++  E DL V   +L
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            +Y+ CG +   Q++F+ +     V+W T+I+G + NG  D AL ++ QM L G+     
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           +   +  A S L +L  GR+ HA  +K     D F+  SL+DMYAK G+I  +  +F  +
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             ++T  WNAM++G   HG  +E +KLFE+M+  G  PD +TF+GVL+AC+++GL+ E  
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL-SMPFEASASMHRALLGACR 773
                M+  +G++P ++HY+ ++D LGRAG+  +A  ++   M  EA   + ++LL +CR
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA- 832
           +  + E G+ VA KL  LEP     YVLLSN++A   +W+DV   R  M   +++KD   
Sbjct: 779 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 838

Query: 833 ------DLIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                   +F+ V G                L  +I + GY PDT  V  D+ EEEK   
Sbjct: 839 SWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ 898

Query: 871 LYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA------------NRFHH 907
           L  HSEKLA  YGLI T   + I             N   L +             RFHH
Sbjct: 899 LRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHH 958

Query: 908 LRDGMCPCAD 917
            ++G+C C D
Sbjct: 959 FKNGVCSCGD 968



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 201/737 (27%), Positives = 323/737 (43%), Gaps = 121/737 (16%)

Query: 52  SSSQWFSILRHAI--------STSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCG 102
           SSS  F ++R A+           D+ +G+  H  +  S+++  D  L   ++TMY+ CG
Sbjct: 75  SSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCG 134

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           S   +R +FD +  ++L  WN+++++Y+ +     + V E F     +  +       T 
Sbjct: 135 SPDDSRFVFDALRSKNLFQWNAVISSYSRNEL--YDEVLETF--IEMISTTDLLPDHFTY 190

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             ++K C     V     VHG  +K GLV D FV  ALV+ Y   G + +A  LFD M E
Sbjct: 191 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHR----SGLCPDDESVQCVLGVIS-----DL 273
           R++V W  M+R +++NGF EE F L  ++          PD  ++  VL V +      L
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310

Query: 274 GKRHEEQVQAYAIKLLL----------------------------YNNNSNVVLWNKKLS 305
           GK     V  +A+KL L                             NNN NVV WN  + 
Sbjct: 311 GK----GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 366

Query: 306 GYLQVGDNHGAIECFVNMIR--SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           G+   GD HG  +    M+    +V+ D VT L A+        L   +++H  +LK  F
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426

Query: 364 YSAVIVGNSLINMYSKMGC----------------------------------------- 382
               +V N+ +  Y+K G                                          
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486

Query: 383 --VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
             + GL  D FT+ S+L A S L + L L K++H   I+N    D FV  +++ +Y   G
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKL-KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            +   + LF+  +   L +WN +I GY+ +    +AL +F  M   G +L  I++     
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L  L+ G++ HAYA+K   E D  ++  ++DMY K G++  +  +FN +      +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  MI G   +G    A+ ++ +M+ +G  PD+ TF         LTA      IH  L 
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL------GVLTACNHSGLIHEGLR 719

Query: 621 KLDCSSDPFVGIS--------LVDMYAKCGNIEDAY-ILFKQMDMRNTV-LWNAMLVGLA 670
            LD     F G+         ++DM  + G ++ A  ++ ++M     V +W ++L    
Sbjct: 720 YLDQMKSSF-GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778

Query: 671 QHGN---GEET-LKLFE 683
            H N   GE+   KLFE
Sbjct: 779 IHQNLEMGEKVAAKLFE 795



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 8/289 (2%)

Query: 508 LKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           ++ G+++H     S     D  + + I+ MY  CG+  D++ +F+ + + +   W  +IS
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159

Query: 567 GCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
               N   D  L  + +M   + ++PD FT+  ++KA + ++ +  G  +H  ++K    
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV 219

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D FVG +LV  Y   G + DA  LF  M  RN V WN+M+   + +G  EE+  L  +M
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 279

Query: 686 KAHGVE----PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
                +    PD  T + VL  C+    +    +  H    K  ++ E+   + L+D   
Sbjct: 280 MEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYS 338

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           + G    A ++I  M    +      ++G    +GDT     V  +++A
Sbjct: 339 KCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 209/581 (35%), Positives = 317/581 (54%), Gaps = 51/581 (8%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           ++ + FT   V +AS+ +   +   KQIH  A+K   + D FV  +  D+YC+ G   +A
Sbjct: 104 VQPNDFTFPCVFKASAFVQIPM-TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDA 162

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     +LATWNA I   +    S  A+  F          + IT    + AC  +
Sbjct: 163 CNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDM 222

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTM 564
           + L  G+Q+HA+ ++ G++ D+ V++G++D Y KCG +V A+ +FN I    +V +W +M
Sbjct: 223 VRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSM 282

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ++  V N EE+ A  ++ Q R   V P +F  + ++ A + L  LE GR +HA  +K   
Sbjct: 283 LAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACV 341

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + FVG +LVDMY KCG+IE+A  +F ++  RN V WNAM+ G A  G+ +  L+LFE+
Sbjct: 342 EDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEE 401

Query: 685 MK--AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           M   +HG+ P  VT I +LS CS  G V    + F  MR  YGIEP  EH++ +VD LGR
Sbjct: 402 MTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGR 461

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           +G    A E I +M  + + S+  ALLGACR+ G TE GK  AEKL  L+  DS  +V+L
Sbjct: 462 SGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVL 521

Query: 803 SNIFAAANQWDDVTSARGEMK----RKNV---------------KKDPADLIFAKVEGLI 843
           SN+ A+A +W++ T  R EMK    +KNV                KD +    ++++ ++
Sbjct: 522 SNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAML 581

Query: 844 KRI----KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
            ++    KE GYVPDT+  L D+E+EEK   ++YHSEK+A A+GLI+ P    I      
Sbjct: 582 GKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNL 641

Query: 894 ---------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                          +  +E +  +  RFH  +DG C C D
Sbjct: 642 RICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKD 682



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 208/462 (45%), Gaps = 12/462 (2%)

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKND-TVADSFVSTALIDVYCRNGSMAEAEYL 448
           Q  L S+L ++ S    + L + IH H I+   T   SF+S  L+++Y +   +  A+++
Sbjct: 6   QNLLGSLLESAVSTHCSI-LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHV 64

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
                   + TW ++I G + +     AL  F++M     + ++ T     KA   + + 
Sbjct: 65  LSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIP 124

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             GKQ+H  A+K G   D+ V     DMY K G   DA ++F+++P  +   W   IS  
Sbjct: 125 MTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNA 184

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V +     A+  + +       P+  TF   + A   +  L  GRQ+HA +++     D 
Sbjct: 185 VQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDV 244

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            V   L+D Y KCG+I  A ++F ++  R N V W +ML  L Q+   E    +F   + 
Sbjct: 245 SVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK 304

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             VEP       VLSAC+  G + E   + H +  K  +E  +   S LVD  G+ G  +
Sbjct: 305 E-VEPTDFMISSVLSACAELGGL-ELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIE 362

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
            A ++   +P E +     A++G    QGD +    + E++         +YV L +I +
Sbjct: 363 NAEQVFSELP-ERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILS 421

Query: 808 AANQWDDVTSARG----EMKRKNVKKDPADLIFAKVEGLIKR 845
             ++   V   RG    E  R N   +P    FA V  L+ R
Sbjct: 422 VCSRVGAVE--RGIQIFESMRLNYGIEPGAEHFACVVDLLGR 461



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 199/442 (45%), Gaps = 60/442 (13%)

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VV W   +SG +       A+  F NM R NVQ +  TF     A A       G+QIHG
Sbjct: 73  VVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHG 132

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------------------------------- 381
             LK G    V VG S  +MY K G                                   
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLD 192

Query: 382 ---------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                    CV G   +  T  + L A   +   L+L +Q+H   ++     D  V+  L
Sbjct: 193 AIVAFKEFLCVHG-EPNSITFCAFLNACVDMVR-LNLGRQLHAFIVRCGYKEDVSVANGL 250

Query: 433 IDVYCRNGSMAEAEYLFENKDG--FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ID Y + G +  AE +F N+ G   ++ +W +M+   + ++   +A  +F       E  
Sbjct: 251 IDFYGKCGDIVSAEMVF-NRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPT 309

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D   I++ + AC  L  L+ G+ +HA A+K+  E ++ V S ++DMY KCG++ +A+ +F
Sbjct: 310 D-FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS--GVVPDEFTFAILVKASSCLTA 608
           +++P  + V W  MI G    G+ D+AL ++ +M L   G+ P   T   ++   S + A
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428

Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAM 665
           +E+G QI  ++ +L+   +P       +VD+  + G ++ AY   + M ++ T+ +W A+
Sbjct: 429 VERGIQIFESM-RLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGAL 487

Query: 666 LVGLAQHGNGE----ETLKLFE 683
           L     HG  E       KLFE
Sbjct: 488 LGACRMHGKTELGKIAAEKLFE 509



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 223/568 (39%), Gaps = 126/568 (22%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           S+L  A+ST   +LG++ HA I+ +   P   FL+N+L+ MYS+   L  A+ +      
Sbjct: 11  SLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL 70

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R +++W S+++   H+              F ++R      +  T   + K         
Sbjct: 71  RTVVTWTSLISGCVHN-----RRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPM 125

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +HG ALK G+++D FV  +  ++Y K G   +A  +FD M +R++  W     AY 
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWN----AYI 181

Query: 237 ENGFGEE-------VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKL 288
            N   +         F  F+ +H     P+  +    L    D+ + +   Q+ A+ ++ 
Sbjct: 182 SNAVQDRRSLDAIVAFKEFLCVHGE---PNSITFCAFLNACVDMVRLNLGRQLHAFIVRC 238

Query: 289 --------------------------LLYN---NNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                     +++N   N  NVV W   L+  +Q   NH     
Sbjct: 239 GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ---NHEEERA 295

Query: 320 FVNMIRSNVQYDSVTFLVA--LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
            +  +++  + +   F+++  L+A A    L LG+ +H   +K+     + VG++L++MY
Sbjct: 296 CMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMY 355

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
            K G          ++ +  +  S LPE                                
Sbjct: 356 GKCG----------SIENAEQVFSELPE-------------------------------- 373

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH--TSGERLDEITI 495
           RN                 L TWNAMI GY    +   AL LF  M   + G R   +T+
Sbjct: 374 RN-----------------LVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTL 416

Query: 496 ATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
            + +  C  +  +++G Q+       Y ++ G E   CV    +D+  + G +  A    
Sbjct: 417 ISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACV----VDLLGRSGLVDRAYEFI 472

Query: 551 NDIP-APDDVAWTTMISGCVDNGEEDLA 577
            ++   P    W  ++  C  +G+ +L 
Sbjct: 473 QNMAIQPTISVWGALLGACRMHGKTELG 500



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 9/226 (3%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S  + + L   +    L LG+  HA I+      D  + N L+  Y +CG +V A  +F
Sbjct: 208 NSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVF 267

Query: 112 DKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           +++ +R +++SW S+LAA   + E           +F   R+ +  T    ++ +L  C 
Sbjct: 268 NRIGNRKNVVSWCSMLAALVQNHEEE-----RACMVFLQARKEVEPTD-FMISSVLSACA 321

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
             G +    +VH  A+K  +  + FV  ALV++Y K G I  A+ +F  + ER++V W  
Sbjct: 322 ELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNA 381

Query: 231 MLRAYAENGFGEEVFHLF--VDLHRSGLCPDDESVQCVLGVISDLG 274
           M+  YA  G  +    LF  + L   G+ P   ++  +L V S +G
Sbjct: 382 MIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVG 427


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 235/744 (31%), Positives = 355/744 (47%), Gaps = 75/744 (10%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           L  L + C  +  V  +  VH   +  G+      S  ++ +Y   G+ R+A  LF  ++
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG------------V 269
            R  + W  M+R     G+ +     +  +  S + PD  +   V+             V
Sbjct: 74  LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 133

Query: 270 ISDLGKRHEEQVQAYAIKLL--LYNNNS---------------NVVLWNKKLSGYLQVGD 312
           + D  +     V  +A   L  LY +N                + +LWN  L GY++ GD
Sbjct: 134 VHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGD 193

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              AI  F  M  S    +SVT+   L+  A   N   G Q+HG  + SGF     V N+
Sbjct: 194 FDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANT 253

Query: 373 LINMYSKMGCV-------------------------------------------CGLRTD 389
           L+ MYSK G +                                            G++ D
Sbjct: 254 LVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313

Query: 390 QFTLASVLRASSSLPEG-LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
             T AS L   S L  G L   K++H + +++    D ++ +ALIDVY + G +  A  +
Sbjct: 314 SVTFASFL--PSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKI 371

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     D+A   AMI GY+L   +  A+  F  +   G   + +T+A+ + AC  +  L
Sbjct: 372 FQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAAL 431

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           K GK++H + +K   E  + V S I DMY KCG +  A   F  +   D V W +MIS  
Sbjct: 432 KPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSF 491

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG+ ++A+ ++ QM +SG   D  + +  + A++ L AL  G+++H  +I+   SSD 
Sbjct: 492 SQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDT 551

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           FV  +L+DMY+KCGN+  A+ +F  MD +N V WN+++     HG   E L L+ +M   
Sbjct: 552 FVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRA 611

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G+ PD VTF+ ++SAC + GLV E    FH M  +YGI   +EHY+ +VD  GRAGR  E
Sbjct: 612 GIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHE 671

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I SMPF   A +   LLGACR+ G+ E  K  +  L+ L+P +S  YVLLSN+ A 
Sbjct: 672 AFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHAD 731

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA 832
           A +W  V   R  MK K V+K P 
Sbjct: 732 AGEWASVLKVRSLMKEKGVQKIPG 755



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 176/710 (24%), Positives = 308/710 (43%), Gaps = 100/710 (14%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S ++Q  S+ R     S +   +  H +++          ++ ++ +Y  CG    A  L
Sbjct: 9   SLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNL 68

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL---FRSLRESITFTSRLTLAPLLK 167
           F ++  R  + WN ++      G  +       F L   F+ L  +++   + T   ++K
Sbjct: 69  FFELELRYALPWNWMIRGLYMLGWFD-------FALLFYFKMLGSNVS-PDKYTFPYVIK 120

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
            C     V     VH  A  +G   D F   AL+ +Y+  G IR+A+ +FD +  RD +L
Sbjct: 121 ACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTIL 180

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVIS 271
           W VMLR Y ++G  +     F ++  S    +  +  C+L                G++ 
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240

Query: 272 DLGKRHEEQVQ-------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
             G   + QV               YA KL      ++ V WN  ++GY+Q G    A  
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  MI + V+ DSVTF   L ++  + +L   +++H   ++      V + ++LI++Y 
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYF 360

Query: 379 KMG-----------------CVC--------------------------GLRTDQFTLAS 395
           K G                  VC                          G+ T+  T+AS
Sbjct: 361 KGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMAS 420

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           VL A +++   L   K++H H +K        V +A+ D+Y + G +  A   F      
Sbjct: 421 VLPACAAV-AALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDR 479

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D   WN+MI  +  +     A++LF  M  SG + D +++++A+ A   L  L  GK+MH
Sbjct: 480 DSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMH 539

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
            Y +++ F  D  V+S ++DMY KCG +  A  +FN +   ++V+W ++I+   ++G   
Sbjct: 540 GYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPR 599

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-- 633
             L +YH+M  +G+ PD  TF +++ A      +++G  IH       C +  + GI   
Sbjct: 600 ECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEG--IH----YFHCMTREY-GIGAR 652

Query: 634 ------LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
                 +VD+Y + G + +A+   K M    +  +W  +L     HGN E
Sbjct: 653 MEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVE 702



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 254/565 (44%), Gaps = 80/565 (14%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D F  + L+ +Y+  G +  ARR+FD++P RD I WN +L  Y  SG+            
Sbjct: 146 DLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGD-----FDNAIGT 200

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +R S +  + +T   +L +C + G   A   +HG  +  G  +D  V+  LV +YSK
Sbjct: 201 FCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSK 260

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G +  A+ LF+ M + D V W  ++  Y +NGF +E   LF  +  +G+ PD  +    
Sbjct: 261 CGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASF 320

Query: 267 LGVISDLGK-RHEEQVQAYAI----------------------------KLLLYNNNSNV 297
           L  I + G  RH ++V +Y +                            K+   N   +V
Sbjct: 321 LPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDV 380

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            +    +SGY+  G N  AI  F  +I+  +  +S+T    L A A    L  G+++H  
Sbjct: 381 AVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCH 440

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG----------------CVC----------------- 384
            LK    + V VG+++ +MY+K G                 VC                 
Sbjct: 441 ILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIA 500

Query: 385 ----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G + D  +L+S L A+++LP  L+  K++H + I+N   +D+FV++ LID
Sbjct: 501 IDLFRQMGMSGAKFDSVSLSSALSAAANLP-ALYYGKEMHGYVIRNAFSSDTFVASTLID 559

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G++A A  +F   DG +  +WN++I  Y       + L+L+  M  +G   D +T
Sbjct: 560 MYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVT 619

Query: 495 IATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
               + ACG   ++ +G    H    + G    +   + ++D+Y + G + +A      +
Sbjct: 620 FLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSM 679

Query: 554 P-APDDVAWTTMISGCVDNGEEDLA 577
           P  PD   W T++  C  +G  +LA
Sbjct: 680 PFTPDAGVWGTLLGACRLHGNVELA 704



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 165/362 (45%), Gaps = 34/362 (9%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           S  +S  +  IL    +  +   G   H  ++ S    D  + N L+ MYS+CG+L+YAR
Sbjct: 209 SMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYAR 268

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           +LF+ MP  D ++WN ++A Y  +G  +     E   LF ++  +      +T A  L  
Sbjct: 269 KLFNTMPQTDTVTWNGLIAGYVQNGFTD-----EAAPLFNAMISAGVKPDSVTFASFLPS 323

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
            L SG +   + VH Y ++  + +D ++  AL+++Y K G +  A+ +F      DV + 
Sbjct: 324 ILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVC 383

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD--------------LG 274
             M+  Y  +G   +  + F  L + G+  +  ++  VL   +               L 
Sbjct: 384 TAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILK 443

Query: 275 KRHEEQVQA---------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
           KR E  V                  A +     ++ + V WN  +S + Q G    AI+ 
Sbjct: 444 KRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDL 503

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  M  S  ++DSV+   AL+A A    L  G+++HG  +++ F S   V ++LI+MYSK
Sbjct: 504 FRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSK 563

Query: 380 MG 381
            G
Sbjct: 564 CG 565


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 199/590 (33%), Positives = 316/590 (53%), Gaps = 49/590 (8%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I MY++M   C +  D F+   VL+A S+LP  L + +++H    ++   +D FV   L+
Sbjct: 158 IEMYARMQVAC-VSPDGFSFPCVLKACSALP-ALEMGRRVHGQIFRHGFESDVFVQNGLV 215

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y + G +  A  +F       + +W ++I GY  +    +AL +FS M  +  R D I
Sbjct: 216 ALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWI 275

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
            + + ++A   +  L+ GK +H   +K G E +  +   +  +Y KCG ++ A+  FN +
Sbjct: 276 ALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQV 335

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
             P  + W  MISG V NG  + A+ ++  M+   + PD  T    + A + + +LE  R
Sbjct: 336 ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELAR 395

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            +   +   +  +D  V  SL+D YAKCG+++ A  +F ++  ++ V+W+AM+VG   HG
Sbjct: 396 WMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHG 455

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
            G E++ LF  M+  GV P+ VTF+G+L+AC  +GLV E ++ FH MR+ YGIEP  +HY
Sbjct: 456 QGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHY 514

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + +VD LGRAG    A   +++MP E   S+  ALL AC++      G++ AE+L +L+P
Sbjct: 515 ACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDP 574

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK-----------------------D 830
           +++  YV LSN++A++  WD V   R  M+ K + K                        
Sbjct: 575 YNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHP 634

Query: 831 PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
            +  IF +VE L +R+KE G+VP T+ VL D+  EE E  L  HSE+LA AYGLISTPP 
Sbjct: 635 RSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPG 694

Query: 891 SVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           + +                     L ++E +   A RFHH +DG C C D
Sbjct: 695 TTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGD 744



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 164/303 (54%), Gaps = 5/303 (1%)

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           HL+ QI+   +        F+   L++     G ++ A  LF+     D+  WNA++  Y
Sbjct: 90  HLN-QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCY 148

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
                   A+E+++ M  +    D  +    +KAC  L  L+ G+++H    + GFE D+
Sbjct: 149 SRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDV 208

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V +G++ +Y KCG +V A ++F  +     V+WT++ISG   NG+   AL I+ +MR +
Sbjct: 209 FVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKT 268

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGISLVDMYAKCGNIE 645
            V PD      +++A + +  LE G+ IH  +IK  L+C  D  + ISL  +YAKCG++ 
Sbjct: 269 NVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFD--LLISLTSLYAKCGHVM 326

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            A + F Q++  + + WNAM+ G  ++G  EE ++LF  MK+  + PDS+T    ++AC+
Sbjct: 327 VARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACA 386

Query: 706 YTG 708
             G
Sbjct: 387 QIG 389



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 208/475 (43%), Gaps = 65/475 (13%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL--------LLGKSTH--------A 77
           F  S L FL+ +H+SSS + +  F+  +   + S          L+  S H        A
Sbjct: 38  FPASTLKFLE-THYSSSLNLTTHFNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQIYA 96

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++L +      FL   L+   S  G +  AR+LFDK PD D+  WN+I+  Y+  G    
Sbjct: 97  KLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG---- 152

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
                   ++  ++ +       +   +LK C +   +     VHG   + G   D FV 
Sbjct: 153 -FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             LV +Y+K G+I  A  +F  + +R +V W  ++  YA+NG   E   +F ++ ++ + 
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271

Query: 258 PDDESVQCVLGVISDLGK-RHEEQVQAYAIKL--------------------------LL 290
           PD  ++  VL   +D+    H + +    IK+                          L 
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLF 331

Query: 291 YNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
           +N   N +++ WN  +SGY++ G    AIE F  M   N++ DS+T   ++AA A   +L
Sbjct: 332 FNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSL 391

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR--TDQFTLASVLRASSSL-PE 405
            L + +      S F + VIV  SLI+ Y+K G V   R   D+     V+  S+ +   
Sbjct: 392 ELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY 451

Query: 406 GLHLSKQ---IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           GLH   +   I  HA++   V+ + V+   +   C+N  + E        +G+DL
Sbjct: 452 GLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVE--------EGWDL 498


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 242/776 (31%), Positives = 371/776 (47%), Gaps = 144/776 (18%)

Query: 283 AYAIKLL--LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           AYAI LL  L  + S+V  WN+ +   L +G        +  M       D  TF     
Sbjct: 208 AYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFK 267

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------CVCGLR- 387
           A A   +L+LG  +H T  +SGF S V V N++++MY K G            C  G++ 
Sbjct: 268 ACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQD 327

Query: 388 ----------------------------------TDQFTLASVLRASSSLPEGLHLSKQI 413
                                              D  +L ++L A +SL   L   +Q+
Sbjct: 328 LVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLR-GRQV 386

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY------ 467
           H  +I++  V D FV  A++D+Y + G M EA  +F+     D+ +WNAM+ GY      
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRL 446

Query: 468 ------------------------ILSNNSHK-----ALELFSHMHTSGERLDEITIATA 498
                                   +++  + +     AL++F  M   G R + +T+ + 
Sbjct: 447 EHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSL 506

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELD--------LCVSSGILDMYVKCGAMVDAQSIF 550
           + AC  +  L  GK+ H YA+K    LD        L V +G++DMY KC +   A+ +F
Sbjct: 507 LSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMF 566

Query: 551 NDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRL--SGVVPDEFTFAILVKASSCL 606
           + +   D   V WT MI G   +G+ + AL ++  M      + P++FT +  + A + L
Sbjct: 567 DSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARL 626

Query: 607 TALEQGRQIHANLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
            AL  GRQ+HA +++    S   FV   L+DMY+K G+++ A I+F  M  RN V W ++
Sbjct: 627 AALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSL 686

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G   HG GE+ L++F++M+   + PD +TF+ VL ACS++G+V      F+ M + +G
Sbjct: 687 MTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFG 746

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           ++P  EHY+ +VD  GRAGR  EA +LI  MP E +  +  ALL ACR+  + E G++ A
Sbjct: 747 VDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAA 806

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
            +L+ LE  +  +Y LLSNI+A A +W DV   R  MKR  +KK P              
Sbjct: 807 NRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATF 866

Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAY 882
                    +  I+  +  LI+RIK  GYVP T F L DV++EEK   L+ HSEKLA AY
Sbjct: 867 YVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAY 926

Query: 883 GLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           G+++  P + I   K                           ++RFHH ++G C C
Sbjct: 927 GILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSC 982



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 192/750 (25%), Positives = 321/750 (42%), Gaps = 122/750 (16%)

Query: 15  HTYVIFSSFTKDTYRNL-----------PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHA 63
           H  +I      +TYR+            P+  +  +  LQ+ H     S S    +LR  
Sbjct: 85  HQEMIKDRVRTETYRDAIMQHQSSIAGKPAIRIVFVSVLQQLHHRYRCSISM---LLRCF 141

Query: 64  ISTSDLLLGKSTHARILNSSQIPDR-------------------------FLTNNLMTMY 98
              S LL  + T+ R+L+ + IP                            L  NL+  Y
Sbjct: 142 PIKSKLLQSQFTNTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGLLFHLATNLIGTY 201

Query: 99  SRCGSLVYARRLFDKMPDR--DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
               S  YA  L +++P     +  WN ++    H G        + F L+R ++     
Sbjct: 202 IASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPR-----DVFTLYRQMKSLGWT 256

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
               T   + K C +   +    ++H    + G   + FV  A+V++Y K G +R A  +
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNM 316

Query: 217 FDGMQER---DVVLWKVMLRAYAENGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISD 272
           FD +  R   D+V W  ++ AY           LF  +  R  + PD  S+  +L   + 
Sbjct: 317 FDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACAS 376

Query: 273 LGKR-HEEQVQAYAIKLLLYNNN----------------------------SNVVLWNKK 303
           L       QV  ++I+  L ++                              +VV WN  
Sbjct: 377 LAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAM 436

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           ++GY Q G    A+  F  M   N++ D VT+   +   A       GQ           
Sbjct: 437 VTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYA-----QRGQ----------- 480

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK---- 419
                 G   ++++ +M C CG R +  TL S+L A  S+   LH  K+ H +AIK    
Sbjct: 481 ------GCEALDVFRQM-CDCGSRPNVVTLVSLLSACVSVGALLH-GKETHCYAIKFILN 532

Query: 420 ---NDTVADSF-VSTALIDVYCRNGSMAEAEYLFEN---KDGFDLATWNAMIFGYILSNN 472
               D  AD   V   LID+Y +  S   A  +F++   KD  D+ TW  MI GY    +
Sbjct: 533 LDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDR-DVVTWTVMIGGYAQHGD 591

Query: 473 SHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCV 529
           ++ AL+LFS M    + +  ++ T++ A+ AC  L  L+ G+Q+HAY +++ +  + L V
Sbjct: 592 ANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFV 651

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           ++ ++DMY K G +  AQ +F+++P  + V+WT++++G   +G  + AL ++ +MR   +
Sbjct: 652 ANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPL 711

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDA 647
           VPD  TF +++ A S    ++ G      + K D   DP       +VD++ + G + +A
Sbjct: 712 VPDGITFLVVLYACSHSGMVDHGINFFNRMSK-DFGVDPGPEHYACMVDLWGRAGRLGEA 770

Query: 648 YILFKQMDMRNT-VLWNAMLVGLAQHGNGE 676
             L  +M M  T V+W A+L     H N E
Sbjct: 771 MKLINEMPMEPTPVVWVALLSACRLHSNVE 800



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 7/309 (2%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
           ++T LI  Y  + S A A  L E        +  WN +I   +   +      L+  M +
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G   D  T     KAC  L  L  G  +HA   +SGF  ++ V + ++ MY KCGA+  
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312

Query: 546 AQSIFNDI---PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVK 601
           A ++F+D+      D V+W +++S  +   + + AL+++H+M    ++ PD  +   ++ 
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A + L A  +GRQ+H   I+     D FVG ++VDMYAKCG +E+A  +F++M  ++ V 
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WNAM+ G +Q G  E  L LFE M    +E D VT+  V++  +  G   EA + F  M 
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492

Query: 722 EKYGIEPEV 730
           +  G  P V
Sbjct: 493 D-CGSRPNV 500


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 257/832 (30%), Positives = 394/832 (47%), Gaps = 98/832 (11%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLF 217
             L P  K   +   + A  ++HG AL+  L+  +   V+ AL+  Y++ G +  A  LF
Sbjct: 60  FALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALF 119

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-- 275
           + M  RD V +  ++ A               D+   G      ++  VL   S L +  
Sbjct: 120 NAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDL 179

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           R   +  A+A+K                 +G+L  GD   A    ++M       D    
Sbjct: 180 RLGREAHAFALK-----------------NGFLD-GDERFAFNALLSMYARLGLVDDAQM 221

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
           L    +V  TD+   G  +   T+ S    +   G ++  +Y  +    G+R D  T AS
Sbjct: 222 L--FGSVDTTDSPG-GGVVTWNTMVSLLVQSGRCGEAIEVIYDMVAR--GVRPDGITFAS 276

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
            L A S L E L L +++H + +K+ D  A+SFV++AL+D+Y  +  +  A  +F+   G
Sbjct: 277 ALPACSQL-EMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPG 335

Query: 455 --FDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQG 511
               L  WNAM+ GY  +    +ALELF+ M   +G    E TIA  + AC         
Sbjct: 336 GHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGK 395

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           + +H Y +K G   +  V + ++D+Y + G M  A+ IF  I   D V+W T+I+GCV  
Sbjct: 396 EAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQ 455

Query: 572 GEEDLALSIYHQMRLSG------------------VVPDEFTFAILVKASSCLTALEQGR 613
           G    A  +  +M+  G                  VVP+  T   L+   + L A  +G+
Sbjct: 456 GHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGK 515

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           +IH   ++    SD  VG +LVDMYAKCG +  +  +F ++  RN + WN +++    HG
Sbjct: 516 EIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHG 575

Query: 674 NGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
            G+E + LF+ M  ++  +P+ VTFI  L+ACS++G+V    E FH M+  +G++P  + 
Sbjct: 576 LGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDL 635

Query: 733 YSFLVDALGRAGRTKEAGELILSM-PFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           ++  VD LGRAGR  EA  +I SM P E   S   + LGACR+  +   G+  AE+L  L
Sbjct: 636 HACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQL 695

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
           EP ++S YVLL NI++AA  W+  +  R  M+++ V K+P                    
Sbjct: 696 EPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESA 755

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              + L+ A ++ L +R++  GY PDT  VL D+EE EK   L YHSEKLA A+GL+ TP
Sbjct: 756 HPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTP 815

Query: 889 PSSVILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
           P + I   K     N                       RFHH  DG C C D
Sbjct: 816 PGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGD 867



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 191/405 (47%), Gaps = 23/405 (5%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA--DSFVSTALIDVYCRNGSMAEAE 446
           D F L    +++++L   L   + IH  A++ D +      V+ AL+  Y R G +  A 
Sbjct: 58  DHFALPPAAKSAAAL-RSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAAL 116

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            LF      D  T+N++I    L      AL+    M   G  L   T+ + + AC  L 
Sbjct: 117 ALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLA 176

Query: 507 M-LKQGKQMHAYAMKSGFELD---LCVSSGILDMYVKCGAMVDAQSIF-----NDIPAPD 557
             L+ G++ HA+A+K+GF LD       + +L MY + G + DAQ +F      D P   
Sbjct: 177 EDLRLGREAHAFALKNGF-LDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGG 235

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V W TM+S  V +G    A+ + + M   GV PD  TFA  + A S L  L  GR++HA
Sbjct: 236 VVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHA 295

Query: 618 NLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD--MRNTVLWNAMLVGLAQHGN 674
            ++K  D +++ FV  +LVDMYA    +  A  +F  +    R   LWNAM+ G AQ G 
Sbjct: 296 YVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGM 355

Query: 675 GEETLKLFEDMKAH-GVEPDSVTFIGVLSAC--SYTGLVSEAYENFHLMREKYGIEPEVE 731
            EE L+LF  M+A  GV P   T  GVL AC  S T    EA   + +++      P V+
Sbjct: 356 DEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGY-VLKRGMADNPFVQ 414

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           +   L+D   R G   EA   I +            L+  C VQG
Sbjct: 415 NA--LMDLYARLG-DMEAARWIFAAIEPRDVVSWNTLITGCVVQG 456



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 149/641 (23%), Positives = 259/641 (40%), Gaps = 147/641 (22%)

Query: 68  DLLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKM-----PDRDLI 120
           DL LG+  HA  L +  +   +RF  N L++MY+R G +  A+ LF  +     P   ++
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 121 SWNSILAAYAHSGE-GNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWAS 178
           +WN++++    SG  G A  V     + R +R + ITF S L     L++ LS G     
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDM-VARGVRPDGITFASALPACSQLEM-LSLG----- 290

Query: 179 ETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRAY 235
             +H Y LK   L  + FV+ ALV++Y+   ++  A+ +FD +    R + LW  M+  Y
Sbjct: 291 REMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGY 350

Query: 236 AENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISD----LGKRHEEQVQAYAIKLLL 290
           A+ G  EE   LF  +   +G+ P + ++  VL   +      GK   E V  Y +K  +
Sbjct: 351 AQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGK---EAVHGYVLKRGM 407

Query: 291 YNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N                              +VV WN  ++G +  G  H A +    
Sbjct: 408 ADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ---- 463

Query: 323 MIRSNVQYDSVTFLVALAAVAGTD-------NLNL---------------GQQIHGTTLK 360
           ++R   Q    T       +AGTD       N+ L               G++IHG  ++
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR 523

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
               S + VG++L++MY+K GC                        L LS+ +     K 
Sbjct: 524 HALDSDIAVGSALVDMYAKCGC------------------------LALSRAVFDRLPKR 559

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           + +        LI  Y  +G   EA  LF+                 ++SN +       
Sbjct: 560 NVI----TWNVLIMAYGMHGLGDEAIALFDR---------------MVMSNEA------- 593

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVK 539
                   + +E+T   A+ AC    M+ +G ++ H+     G +    + +  +D+  +
Sbjct: 594 --------KPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGR 645

Query: 540 CGAMVDAQSIFNDI-PAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT-F 596
            G + +A SI   + P    V AW++ +  C      ++ L      RL  + PDE + +
Sbjct: 646 AGRLDEAYSIITSMEPGEQQVSAWSSFLGAC--RLHRNVPLGEIAAERLFQLEPDEASHY 703

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
            +L    S     E+  ++   + +   S +P  G S +++
Sbjct: 704 VLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEP--GCSWIEL 742



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 142/343 (41%), Gaps = 66/343 (19%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR- 148
           + N L+T Y+RCG L  A  LF+ MP RD +++NS++AA                 LFR 
Sbjct: 98  VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALC---------------LFRR 142

Query: 149 ------SLRESITFTSRLTLAPLLKLCLSSGYVWA----SETVHGYALKIGLV-WDE-FV 196
                 +LR+ +     L+   L+ + L+  ++          H +ALK G +  DE F 
Sbjct: 143 WLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFA 202

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERD-----VVLWKVMLRAYAENGFGEEVFHLFVDL 251
             AL+++Y++ G + +A+ LF  +   D     VV W  M+    ++G   E   +  D+
Sbjct: 203 FNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDM 262

Query: 252 HRSGLCPDDESVQCVLGVIS--------------------------------DLGKRHEE 279
              G+ PD  +    L   S                                D+   HE 
Sbjct: 263 VARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHER 322

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVA 338
              A  +  ++   +  + LWN  + GY Q G +  A+E F  M   + V     T    
Sbjct: 323 VGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGV 382

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           L A A ++     + +HG  LK G      V N+L+++Y+++G
Sbjct: 383 LPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLG 425



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 24/205 (11%)

Query: 63  AISTSDLLLGK-STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           A + S+   GK + H  +L      + F+ N LM +Y+R G +  AR +F  +  RD++S
Sbjct: 385 ACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVS 444

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT------------------SRLTLA 163
           WN+++      G     ++ + F+L R +++   FT                  + +TL 
Sbjct: 445 WNTLITGCVVQG-----HIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLM 499

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LL  C         + +HGYA++  L  D  V  ALV++Y+K G +  ++ +FD + +R
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLF 248
           +V+ W V++ AY  +G G+E   LF
Sbjct: 560 NVITWNVLIMAYGMHGLGDEAIALF 584


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 240/711 (33%), Positives = 342/711 (48%), Gaps = 105/711 (14%)

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA-VAGTDNL 348
           LY  +S  V +N  ++GY   GD H A+E F  M R + + D  TF   L+A V    N 
Sbjct: 107 LYMRDS--VFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNE 164

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
               Q+H   +K+G                 MGCV     +      V RAS     G+ 
Sbjct: 165 QQCGQMHCAVVKTG-----------------MGCVSSSVLNALLSVYVKRASEL---GIP 204

Query: 409 LSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
            S  +    + ++    D    T +I  Y RN  +  A  +FE       A WNAMI GY
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD- 526
           +      +AL L   M   G + D+IT  T + AC  +   + GKQMHAY +K+    + 
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNH 324

Query: 527 -LCVS---------------------------------SGILDMYVKCGAMVDAQSIFND 552
             C+S                                 + IL  YV  G M +A+S F +
Sbjct: 325 SFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEE 384

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + +  T MISG   NG  D  L ++ QMRL G  P +F FA  + A S L ALE G
Sbjct: 385 MPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENG 444

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           RQ+HA L+ L   S   VG +++ MYAKCG +E A  +F  M   + V WN+M+  L QH
Sbjct: 445 RQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQH 504

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+G + ++LF+ M   GV PD +TF+ VL+ACS+ GLV +    F+ M E YGI P  +H
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDH 564

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD   RAG    A  +I SMP +  A +  ALL  CR+ G+ + G   AE+L  L 
Sbjct: 565 YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------DL- 834
           P +   YVLLSNI+A   +W+DV   R  M+ + V+K+PA                 D+ 
Sbjct: 625 PQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVH 684

Query: 835 -----IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
                ++  +E L   +K+ GY+PDT FVL D+E E+KE AL  HSEKLA  +G++  PP
Sbjct: 685 PEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPP 744

Query: 890 SSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            + +                     ++ +E +  +  RFHH ++G C C D
Sbjct: 745 DATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRD 795



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 164/663 (24%), Positives = 271/663 (40%), Gaps = 143/663 (21%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-------------- 116
           L ++ HA ++ S   P     N L+ MY +  ++VYAR+LF+++P+              
Sbjct: 31  LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 117 -------------------RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR------ 151
                              RD + +N+++  YAH+G+G++        LFR++R      
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHS-----ALELFRAMRRDDFRP 145

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVNIYSKFGK- 209
           +  TFTS L+      L L  G       +H   +K G+      V  AL+++Y K    
Sbjct: 146 DDFTFTSVLS-----ALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASE 200

Query: 210 -------IREAKFLFDGMQERDVVLWKVMLRAYAEN---GFGEEVFHLFVDLHRSGLCPD 259
                  +  A+ LFD M +RD + W  M+  Y  N       EVF   V+         
Sbjct: 201 LGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVE--------- 251

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                       +LG                         WN  +SGY+  G    A+  
Sbjct: 252 ------------NLG-----------------------AAWNAMISGYVHCGCFQEALTL 276

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS----AVIVGNSLIN 375
              M    +Q+D +T+   ++A A   +  +G+Q+H   LK+         + V N+LI 
Sbjct: 277 CRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALIT 336

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           +Y K   V   R                       K  +   ++N    ++ +S      
Sbjct: 337 LYCKNNKVDEAR-----------------------KIFYAMPVRNIITWNAILSG----- 368

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y   G M EA+  FE     +L T   MI G   +    + L+LF  M   G    +   
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A A+ AC  L  L+ G+Q+HA  +  G+E  L V + ++ MY KCG +  A+S+F  +P+
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V+W +MI+    +G    A+ ++ QM   GV PD  TF  ++ A S    +E+GR  
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548

Query: 616 HANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQ 671
             ++++   +    D +    +VD++ + G    A I+   M  +    +W A+L G   
Sbjct: 549 FNSMLESYGITPCEDHYA--RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606

Query: 672 HGN 674
           HGN
Sbjct: 607 HGN 609



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 212/495 (42%), Gaps = 119/495 (24%)

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           + +L + +H   + SGF       N L+ MY K                    SS++   
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK--------------------SSNVVYA 67

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF--DLATWNAMI 464
             L ++I           D+   T LI  YC  G++     +F     +  D   +NAMI
Sbjct: 68  RQLFEEI--------PNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMI 119

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML----KQGKQMHAYAMK 520
            GY  + + H ALELF  M     R D+ T  + + A   L++     +Q  QMH   +K
Sbjct: 120 TGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA---LVLFVGNEQQCGQMHCAVVK 176

Query: 521 SGFELDLCVSSGILD----MYVK--------CGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +G     CVSS +L+    +YVK        C AMV A+ +F+++P  D++ WTTMI+G 
Sbjct: 177 TGMG---CVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGY 233

Query: 569 VDNGE------------EDL-------------------ALSIYHQMRLSGVVPDEFTFA 597
           V N +            E+L                   AL++  +MR  G+  D+ T+ 
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQ 653
            ++ A + + + + G+Q+HA ++K + + +    +S    L+ +Y K   +++A  +F  
Sbjct: 294 TIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353

Query: 654 MDMRNTVLWNA-------------------------------MLVGLAQHGNGEETLKLF 682
           M +RN + WNA                               M+ GLAQ+G G+E LKLF
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           + M+  G EP    F G L+ACS  G + E     H      G E  +   + ++    +
Sbjct: 414 KQMRLDGFEPCDFAFAGALTACSVLGAL-ENGRQLHAQLVHLGYESSLSVGNAMISMYAK 472

Query: 743 AGRTKEAGELILSMP 757
            G  + A  + ++MP
Sbjct: 473 CGVVEAAESVFVTMP 487



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 30/249 (12%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRF----LTNNLMTMYSRCGSLVYARRLF 111
           + +I+    +     +GK  HA IL +   P+      ++N L+T+Y +   +  AR++F
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351

Query: 112 DKMPDRDLISWNSILAAYAHSGE------------------------GNAENV--TEGFR 145
             MP R++I+WN+IL+ Y ++G                         G A+N    EG +
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           LF+ +R           A  L  C   G +     +H   + +G      V  A++++Y+
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G +  A+ +F  M   D+V W  M+ A  ++G G +   LF  + + G+ PD  +   
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531

Query: 266 VLGVISDLG 274
           VL   S  G
Sbjct: 532 VLTACSHAG 540


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 206/581 (35%), Positives = 310/581 (53%), Gaps = 48/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
           GLR + FT  S  +A++S P    +  QIH  AI+   +  D FVS A +D+Y + G + 
Sbjct: 5   GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 64

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A +LF      ++  WNA++   +L     + +E +  +  +G   + ++      AC 
Sbjct: 65  LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 124

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
             + L  G+Q H + +K GFE+D+ V + ++D Y KC     A+++F+ +   + V+W +
Sbjct: 125 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 184

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           M++    NG E+ A + Y   R SG  P +F  +  +   + L  L  GR +HA  ++  
Sbjct: 185 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 244

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             ++ FV  +LVDMY KCG +EDA  +F +   RN V WNAM+ G A  G+ +  L +F+
Sbjct: 245 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 304

Query: 684 DMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           DM   G   P+ +T + V+++CS  GL  + YE F  MRE++GIEP  EHY+ +VD LGR
Sbjct: 305 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 364

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  ++A E+I  MP   S S+  ALLGAC++ G TE G+  AEKL  L+P DS  +VLL
Sbjct: 365 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLL 424

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKV 839
           SN+FA+A +W + T  R EMK   +KKDP                        + I A +
Sbjct: 425 SNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALL 484

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
             L K+++  GY+PDT + L D+EEEEKE  ++ HSEKLA A+GLI  PP   I      
Sbjct: 485 SKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNL 544

Query: 894 ---------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                          +  +E +    NRFHH +   C C D
Sbjct: 545 RICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGD 585



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 35/286 (12%)

Query: 71  LGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           +G   H+  +    +P D F++   + MY + G L  AR LF +MP+R++++WN+++   
Sbjct: 29  IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 88

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G        E    +  LRE+    + ++       C  + Y+   E  HG+ +K G
Sbjct: 89  VLDGR-----PLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCG 143

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D  V  ++V+ Y K     +A+ +FDGM  R+ V W  M+ AYA+NG  EE F  ++
Sbjct: 144 FEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYL 203

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN--------------- 293
              RSG  P D  V   L   + L   H    + A A++  +  N               
Sbjct: 204 GARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCG 263

Query: 294 -------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                          N+V WN  + GY  +GD   A+  F +MIRS
Sbjct: 264 CVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRS 309



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 141/330 (42%), Gaps = 47/330 (14%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N NVV WN  ++  +  G     IE +  +  +    + V+      A AG   L+LG+Q
Sbjct: 75  NRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQ 134

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR-------------------------T 388
            HG  +K GF   V V NS+++ Y K  C    R                          
Sbjct: 135 FHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGA 194

Query: 389 DQFTLASVLRASSSLPE-----------------GLHLSKQIHVHAIKNDTVADSFVSTA 431
           ++   A+ L A  S  E                 GLHL + +H  A+++   A+ FV++A
Sbjct: 195 EEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASA 254

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL- 490
           L+D+Y + G + +AE +F      +L TWNAMI GY    ++  AL +F  M  SGE   
Sbjct: 255 LVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAP 314

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQS 548
           + IT+   + +C    + K G ++    M+  F ++      + ++D+  + G    A  
Sbjct: 315 NYITLVNVITSCSRGGLTKDGYELFE-TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYE 373

Query: 549 IFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           +   +P  P    W  ++  C  +G+ +L 
Sbjct: 374 VIQGMPMRPSISVWGALLGACKMHGKTELG 403



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 5/187 (2%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG+  H  ++      D  + N+++  Y +C     AR +FD M  R+ +SW S++AA
Sbjct: 129 LSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAA 188

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YA +G   AE   E F  +   R S    +   ++  L  C     +     +H  A++ 
Sbjct: 189 YAQNG---AEE--EAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 243

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            +  + FV+ ALV++Y K G + +A+ +F    +R++V W  M+  YA  G  +    +F
Sbjct: 244 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 303

Query: 249 VDLHRSG 255
            D+ RSG
Sbjct: 304 DDMIRSG 310



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG++ HA  + S    + F+ + L+ MY +CG +  A ++F + P R+L++WN+++  
Sbjct: 230 LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGG 289

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-- 186
           YAH G+  A+N    F     +R   T  + +TL  ++  C   G      T  GY L  
Sbjct: 290 YAHIGD--AQNALLVFD--DMIRSGETAPNYITLVNVITSCSRGGL-----TKDGYELFE 340

Query: 187 ----KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENG 239
               + G+         +V++  + G   +A  +  GM  R  + +W  +L A   +G
Sbjct: 341 TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 398


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 223/744 (29%), Positives = 371/744 (49%), Gaps = 84/744 (11%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T    LA LL+ C+      A + +H + L+  L  D F+S  L+  Y+K   I  ++ L
Sbjct: 3   TKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRL 62

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD---------------LHRSGLCPDDE 261
           FD M +RD+  W  +L AY +    E+   LF +               L R+G C    
Sbjct: 63  FDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALV 122

Query: 262 SVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN---------------------------- 293
            V+C        G+R        +IK+ L NN                            
Sbjct: 123 DVEC--------GRR----CHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVP 170

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF--LVALAAVAGTDNLNL- 350
             N V +   + G       + A   F  M+R+ +  DSV+   ++ + +  G     L 
Sbjct: 171 EPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLH 230

Query: 351 -----------GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
                      GQQ+H  T+K GF S + + NSL++MY+K G +         +  V   
Sbjct: 231 DSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVV 290

Query: 400 S-----------SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           S           S   + +   +++  H  + D +    +  A I    ++G +     +
Sbjct: 291 SWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI----KSGDIEAGRQM 346

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+      L++WN ++ GY  + N  +A++LF  M       D  T+A  + +   +++L
Sbjct: 347 FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLL 406

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + G+Q+HA + K+ F  D+ ++SG++ MY KCG +  A+ IF+ I   D V W +M++G 
Sbjct: 407 EGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 466

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             N  +  A + + +MR  G+ P +F++A ++   + L++L QGRQ+H+ + +    +D 
Sbjct: 467 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 526

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           FVG +L+DMY+KCG+++ A  +F  M  +NTV WN M+ G AQ+G G+E + L+EDM   
Sbjct: 527 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 586

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G +PD +TF+ VL+ACS++GLV    + F+ M++++G+EP V+HY+ ++D+LGRAGR  E
Sbjct: 587 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 646

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A  LI  MP +    +   LL +CRV  D    +  AE+L  L+P +S+ YVLL+NI+++
Sbjct: 647 AEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSS 706

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA 832
             +WDD  + R  M    V KDP 
Sbjct: 707 LGRWDDAKAVRELMSYNQVVKDPG 730



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 184/669 (27%), Positives = 304/669 (45%), Gaps = 71/669 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+  I     L GK  HA +L S    D FL+N L+  Y++C ++  +RRLFD+MP R
Sbjct: 10  SLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR 69

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK--LCLSSGYV 175
           D+ +WN+IL AY  + E     + +   LF  + E    +    ++ L +   C +   V
Sbjct: 70  DIYTWNAILGAYCKASE-----LEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDV 124

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                 HG ++KIGL  + +V  AL+ +Y+K   I +A   F  + E + V +  M+   
Sbjct: 125 ECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGL 184

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG---------------KRHEEQ 280
           A++    E F LF  + R+ +  D  S+  VLGV S  G                 H +Q
Sbjct: 185 ADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 244

Query: 281 VQAYAIK-------------LLLYNNNSN---------------VVLWNKKLSGYLQVGD 312
           V    IK             L +Y  N N               VV WN  ++GY Q   
Sbjct: 245 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 304

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG----------TTLKSG 362
           +  AIE    M     + D +T++  L A   + ++  G+Q+             T+ SG
Sbjct: 305 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSG 364

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
            YS        + ++ +M     +  D+ TLA +L   SSL   + L     VHA+    
Sbjct: 365 -YSQNENHKEAVKLFREMQ-FRSVHPDRTTLAIIL---SSLAGMMLLEGGRQVHAVSQKA 419

Query: 423 V--ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           V   D ++++ LI +Y + G +  A+ +F+     D+  WN+M+ G  L++   +A   F
Sbjct: 420 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFF 479

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M   G    + + AT +  C  L  L QG+Q+H+   + G+  D  V S ++DMY KC
Sbjct: 480 KKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKC 539

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G +  A+ +F+ +   + V W  MI G   NG  D A+ +Y  M  SG  PD  TF  ++
Sbjct: 540 GDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVL 599

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR- 657
            A S    ++ G +I  N ++ +   +P V     ++D   + G + +A +L  +M  + 
Sbjct: 600 TACSHSGLVDTGIKIF-NSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKY 658

Query: 658 NTVLWNAML 666
           + ++W  +L
Sbjct: 659 DPIIWEVLL 667



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 29/220 (13%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           +K  F S  S   + ++L      S L  G+  H++I     + D F+ + L+ MYS+CG
Sbjct: 484 EKGMFPSQFS---YATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCG 540

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
            +  AR +FD M  ++ ++WN ++  YA +G G+     E   L+  +  S      +T 
Sbjct: 541 DVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD-----EAVLLYEDMIGSGEKPDGITF 595

Query: 163 APLLKLCLSSGYVWASETV-------HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
             +L  C  SG V     +       HG    +  + D +    +++   + G++ EA+ 
Sbjct: 596 VAVLTACSHSGLVDTGIKIFNSMQQEHG----VEPLVDHYT--CIIDSLGRAGRLHEAEV 649

Query: 216 LFDGMQ-ERDVVLWKVML---RAYAENGF----GEEVFHL 247
           L D M  + D ++W+V+L   R YA+        EE+FHL
Sbjct: 650 LIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHL 689


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 232/749 (30%), Positives = 361/749 (48%), Gaps = 79/749 (10%)

Query: 161 TLAP----LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           +LAP    +L+ C     +      H   L  G+ ++  +   L+ +Y   G   +AK +
Sbjct: 44  SLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNI 103

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--- 273
           F  ++      W  M+R +   G  +     +  +   G  PD  +   V+     L   
Sbjct: 104 FYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSV 163

Query: 274 --GKRHEEQVQAYAIKLLLYNNNSNV------------------------VLWNKKLSGY 307
             G+   +++Q    +L ++  +S +                        VLWN  L+GY
Sbjct: 164 ALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGY 223

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           ++ GD   A   F+ M R+    +SVTF   L+  A    +N G Q+HG  + SG     
Sbjct: 224 VKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDS 283

Query: 368 IVGNSLINMYSKMGCVCGLR--------TDQFTLASVLRA-------------------- 399
            V N+L+ MY+K G +   R        TD  T   ++                      
Sbjct: 284 PVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISA 343

Query: 400 ---------SSSLP---EG--LHLSKQIHVHAIKNDTVADSFVSTALIDVY--CRNGSMA 443
                    SS LP   EG  L   K+IH + I+N    D F+ +ALID+Y  CR+  MA
Sbjct: 344 RMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
               +F+ +   D+    AMI GY+L+  ++ ALE+F  +     R + +T+A+ + AC 
Sbjct: 404 RK--IFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA 461

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L  GK++H + +K+G      V S I+DMY KCG +  A   F  I   D V W +
Sbjct: 462 GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNS 521

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI+ C  NG+ + A+ ++ QM ++G   D  + +  + A + L AL  G++IHA +++  
Sbjct: 522 MITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGA 581

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             SD F   +L+DMY+KCGN++ A  +F  M+ +N V WN+++     HG  +++L LF 
Sbjct: 582 FRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFH 641

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M   G++PD VTF+ ++SAC + G V E    F  M E+ GI   +EHY+ +VD  GRA
Sbjct: 642 GMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRA 701

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           GR  EA  +I SMPF   A +   LLGACR+ G+ E  +  +  L  L+P +S  YVLLS
Sbjct: 702 GRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLS 761

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           N+ A A QW+ V   R  MK + V+K P 
Sbjct: 762 NVHANAGQWESVLKIRSLMKERGVQKVPG 790



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 192/748 (25%), Positives = 331/748 (44%), Gaps = 97/748 (12%)

Query: 13  HKHTYVIFSSFTKDTYRNLPSF---SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL 69
           HK+   I+  F   T   L SF   S+++   LQ S  +  S + Q  SIL+     S L
Sbjct: 3   HKNLSSIYKCFLPSTTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGL 62

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             G+  HA++L +    +  L   L+ MY  CG+ + A+ +F ++       WN ++  +
Sbjct: 63  SQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G+ +          +  +    T   + T   ++K C     V     VH     +G
Sbjct: 123 TMMGQFDF-----ALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMG 177

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D FV  +L+  YS+ G I +A++LFD M  +D VLW VML  Y +NG  +    +F+
Sbjct: 178 FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFM 237

Query: 250 DLHRSGLCPDDESVQCVLGVI-SDLGKRHEEQVQAYAIK-------------LLLYNN-- 293
           ++ R+   P+  +  CVL V  S++      Q+    +              L +Y    
Sbjct: 238 EMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCG 297

Query: 294 -------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                         +++V WN  +SGY+Q G    A   F  MI + ++ DS+TF   L 
Sbjct: 298 HLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLP 357

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-----------------CV 383
            ++    L  G++IH   +++G    V + ++LI++Y K                    V
Sbjct: 358 LLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVV 417

Query: 384 CG--------------------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
           C                           +R +  TLASVL A + L   L L K++H H 
Sbjct: 418 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL-AALTLGKELHGHI 476

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +KN      +V +A++D+Y + G +  A   F      D   WN+MI     +    +A+
Sbjct: 477 LKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAI 536

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           +LF  M  +G + D ++I+ A+ AC  L  L  GK++HA+ M+  F  DL   S ++DMY
Sbjct: 537 DLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMY 596

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG +  A  +F+ +   ++V+W ++I+   ++G    +L+++H M   G+ PD  TF 
Sbjct: 597 SKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFL 656

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--------SLVDMYAKCGNIEDAYI 649
            ++ A      +++G  IH       C ++  +GI         +VD++ + G + +A+ 
Sbjct: 657 AIISACGHAGQVDEG--IH----YFRCMTEE-LGIMARMEHYACMVDLFGRAGRLNEAFG 709

Query: 650 LFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +   M    +  +W  +L     HGN E
Sbjct: 710 MINSMPFSPDAGVWGTLLGACRLHGNVE 737



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 267/593 (45%), Gaps = 104/593 (17%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H +I       D F+ ++L+  YS  G +  AR LFD+MP +D + WN +L  Y 
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224

Query: 131 HSGE-GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            +G+  NA  V      F  +R + T  + +T A +L +C S   +     +HG  +  G
Sbjct: 225 KNGDWDNATGV------FMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG 278

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D  V+  L+ +Y+K G + +A+ LFD M + D+V W  M+  Y +NGF +E   LF 
Sbjct: 279 LEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFH 338

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAI---------------------- 286
           ++  + + PD  +    L ++S+    R  +++  Y I                      
Sbjct: 339 EMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR 398

Query: 287 ------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                 K+       ++V+    +SGY+  G N+ A+E F  +++  ++ +SVT    L 
Sbjct: 399 DVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLP 458

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------CVC 384
           A AG   L LG+++HG  LK+G   +  VG+++++MY+K G                 VC
Sbjct: 459 ACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVC 518

Query: 385 ---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                                      G + D  ++++ L A ++LP  LH  K+IH   
Sbjct: 519 WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP-ALHYGKEIHAFM 577

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           ++    +D F  +ALID+Y + G++  A  +F+  +  +  +WN++I  Y        +L
Sbjct: 578 MRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSL 637

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS--GIL- 534
            LF  M   G + D +T    + ACG           HA  +  G     C++   GI+ 
Sbjct: 638 NLFHGMLGDGIQPDHVTFLAIISACG-----------HAGQVDEGIHYFRCMTEELGIMA 686

Query: 535 ---------DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                    D++ + G + +A  + N +P +PD   W T++  C  +G  +LA
Sbjct: 687 RMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELA 739


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 206/581 (35%), Positives = 310/581 (53%), Gaps = 48/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMA 443
           GLR + FT  S  +A++S P    +  QIH  AI+   +  D FVS A +D+Y + G + 
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A +LF      ++  WNA++   +L     + +E +  +  +G   + ++      AC 
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
             + L  G+Q H + +K GFE+D+ V + ++D Y KC     A+++F+ +   + V+W +
Sbjct: 232 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 291

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           M++    NG E+ A + Y   R SG  P +F  +  +   + L  L  GR +HA  ++  
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             ++ FV  +LVDMY KCG +EDA  +F +   RN V WNAM+ G A  G+ +  L +F+
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411

Query: 684 DMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           DM   G   P+ +T + V+++CS  GL  + YE F  MRE++GIEP  EHY+ +VD LGR
Sbjct: 412 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 471

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  ++A E+I  MP   S S+  ALLGAC++ G TE G+  AEKL  L+P DS  +VLL
Sbjct: 472 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLL 531

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKV 839
           SN+FA+A +W + T  R EMK   +KKDP                        + I A +
Sbjct: 532 SNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALL 591

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
             L K+++  GY+PDT + L D+EEEEKE  ++ HSEKLA A+GLI  PP   I      
Sbjct: 592 SKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNL 651

Query: 894 ---------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                          +  +E +    NRFHH +   C C D
Sbjct: 652 RICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGD 692



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 56/351 (15%)

Query: 16  TYVIFSSFTKDTYRNLPSFS-------LSLLP--FLQKSHFSSSSSSSQWFSILRHAIST 66
           +Y  F S      R LP+ S       L L P  F   S F +++S+    +I       
Sbjct: 84  SYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTI------- 136

Query: 67  SDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
                G   H+  +    +P D F++   + MY + G L  AR LF +MP+R++++WN++
Sbjct: 137 -----GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAV 191

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +      G        E    +  LRE+    + ++       C  + Y+   E  HG+ 
Sbjct: 192 MTNAVLDGR-----PLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFV 246

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   D  V  ++V+ Y K     +A+ +FDGM  R+ V W  M+ AYA+NG  EE F
Sbjct: 247 VKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAF 306

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN----------- 293
             ++   RSG  P D  V   L   + L   H    + A A++  +  N           
Sbjct: 307 AAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMY 366

Query: 294 -----------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                              N+V WN  + GY  +GD   A+  F +MIRS 
Sbjct: 367 GKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG 417



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 182/477 (38%), Gaps = 79/477 (16%)

Query: 179 ETVHGYALK-IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              H  AL+ I      F+   LVN+YSK      A           VV +   +   A+
Sbjct: 35  RAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQ 94

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE--EQVQAYAIK-------- 287
           +G        F  + R GL P+D +        +    R     Q+ + AI+        
Sbjct: 95  HGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDP 154

Query: 288 ---------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                L     N NVV WN  ++  +  G     IE +  +  +
Sbjct: 155 FVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREA 214

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
               + V+      A AG   L+LG+Q HG  +K GF   V V NS+++ Y K  C    
Sbjct: 215 GGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKA 274

Query: 387 R-------------------------TDQFTLASVLRASSSLPE---------------- 405
           R                          ++   A+ L A  S  E                
Sbjct: 275 RAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGL 334

Query: 406 -GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
            GLHL + +H  A+++   A+ FV++AL+D+Y + G + +AE +F      +L TWNAMI
Sbjct: 335 LGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMI 394

Query: 465 FGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
            GY    ++  AL +F  M  SGE   + IT+   + +C    + K G ++    M+  F
Sbjct: 395 GGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE-TMRERF 453

Query: 524 ELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
            ++      + ++D+  + G    A  +   +P  P    W  ++  C  +G+ +L 
Sbjct: 454 GIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELG 510



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 509 KQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           + G+  HA A++     L   + + ++++Y K      A +     P P  V++T  ISG
Sbjct: 32  RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ-GRQIHANLIKLD-CS 625
              +G    ALS +  M   G+ P++FTF    KA++        G QIH+  I+     
Sbjct: 92  AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            DPFV  + +DMY K G ++ A  LF +M  RN V WNA++      G   ET++ +  +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 211

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR--- 742
           +  G  P+ V+     +AC+    +S   E FH    K G E +V   + +VD  G+   
Sbjct: 212 REAGGLPNVVSACAFFNACAGAMYLSLG-EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRC 270

Query: 743 AGRTK 747
           AG+ +
Sbjct: 271 AGKAR 275



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 16/181 (8%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG++ HA  + S    + F+ + L+ MY +CG +  A ++F + P R+L++WN+++  
Sbjct: 337 LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGG 396

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-- 186
           YAH G+  A+N    F     +R   T  + +TL  ++  C   G      T  GY L  
Sbjct: 397 YAHIGD--AQNALLVFD--DMIRSGETAPNYITLVNVITSCSRGGL-----TKDGYELFE 447

Query: 187 ----KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFG 241
               + G+         +V++  + G   +A  +  GM  R  + +W  +L A   +G  
Sbjct: 448 TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKT 507

Query: 242 E 242
           E
Sbjct: 508 E 508


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 226/692 (32%), Positives = 355/692 (51%), Gaps = 81/692 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           Y  ++  +  N+N  +WN  +  Y+Q    H A   + +M+ + +  D+ T+ + + A +
Sbjct: 30  YTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACS 89

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ---FTLASVLRAS 400
              +    +Q+H   LK GF S V V N+LIN +S    VC   TD    F  +SVL + 
Sbjct: 90  IRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS----VCSNMTDACRVFNESSVLDSV 145

Query: 401 S------------SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           S            ++ E  H+  Q+   +I          S ++I ++   G + EA  L
Sbjct: 146 SWNSILAGYIEIGNVEEAKHIYHQMPERSI--------IASNSMIVLFGMRGLVVEACKL 197

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     D+ TW+A+I  +  +    +A+  F  MH  G  +DE+   +A+ AC  LL++
Sbjct: 198 FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVV 257

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG- 567
             GK +H+ ++K G E  + + + ++ MY KCG ++ A+ +F++    D ++W +MISG 
Sbjct: 258 NMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGY 317

Query: 568 ----CVDNGEE--------------------------DLALSIYHQMRLSGVVPDEFTFA 597
                VDN +                           D  L+++ +M++SG  PDE T  
Sbjct: 318 LKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLV 377

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ A + L ALEQG+ +HA + +   + +  +G +L+DMY KCG +E A  +F  M  +
Sbjct: 378 SVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK 437

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
               WNA+++GLA +G  E +L +F +MK   V P+ +TF+GVL AC + GLV E   +F
Sbjct: 438 GISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHF 497

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           + M   + I+P V+HY  +VD LGRAG+ +EA EL+  MP     +   ALLGAC+  GD
Sbjct: 498 YSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGD 557

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----- 832
           +E G+ V  KL+ L+P     +VLLSNI+A+  +WDDV   RG M +  V K P      
Sbjct: 558 SEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 617

Query: 833 ------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                             D I   +  +  ++K  GY PD + VLLDV+EEEKE  L+ H
Sbjct: 618 ANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRH 677

Query: 875 SEKLARAYGLISTPPSSVILSNKEPLYANRFH 906
           SEKLA A+GLI+  P + I   K     N  H
Sbjct: 678 SEKLAIAFGLINISPPTPIRIMKNLRICNDCH 709



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 265/576 (46%), Gaps = 51/576 (8%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
           Y RR+F+ + + +   WN ++ AY  +   +       F L++S+  +       T   L
Sbjct: 30  YTRRIFNFIENTNCFMWNMMIRAYIQTNSPHF-----AFTLYKSMLSNYLGADNYTYPLL 84

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           ++ C      W ++ VH + LK+G   D +V   L+N +S    + +A  +F+     D 
Sbjct: 85  IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDS 144

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC--VLGVISDLGKRHEEQVQA 283
           V W  +L  Y E G  EE  H++  +    +   +  +    + G++ +  K  +E ++ 
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLE- 203

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       ++V W+  ++ + Q      AI  FV M +  V  D V  + AL+A A
Sbjct: 204 -----------KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 252

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               +N+G+ IH  +LK G  S + + N+LI MYSK G              ++ A    
Sbjct: 253 NLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG-------------DIMVARKLF 299

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            E   L        I  +++   ++   L+D          A+ +F++    D+ +W++M
Sbjct: 300 DEAYLLD------LISWNSMISGYLKCNLVD---------NAKAIFDSMPEKDVVSWSSM 344

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  ++   + L LF  M  SG + DE T+ + + AC  L  L+QGK +HAY  ++G 
Sbjct: 345 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            +++ + + ++DMY+KCG +  A  +F  +       W  +I G   NG  + +L ++  
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 464

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKC 641
           M+   V P+E TF  ++ A   +  +++G+    ++I  D    P V     +VD+  + 
Sbjct: 465 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH-DHKIQPNVKHYGCMVDLLGRA 523

Query: 642 GNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGE 676
           G +++A  L  +M M   V  W A+L    +HG+ E
Sbjct: 524 GKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSE 559



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 26/242 (10%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GK  H+  L         L N L+ MYS+CG ++ AR+LFD+    DLISWNS+++ Y 
Sbjct: 259 MGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYL 318

Query: 131 H--------------------------SGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
                                      SG    +   E   LF+ ++ S       TL  
Sbjct: 319 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 378

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           ++  C     +   + VH Y  + GL  +  +   L+++Y K G +  A  +F GM E+ 
Sbjct: 379 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 438

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           +  W  ++   A NG  E    +F ++ +  + P++ +   VLG    +G   E Q   Y
Sbjct: 439 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 498

Query: 285 AI 286
           ++
Sbjct: 499 SM 500



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 108/501 (21%), Positives = 177/501 (35%), Gaps = 156/501 (31%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            K  H  +L      D ++ N L+  +S C ++  A R+F++    D +SWNSILA Y  
Sbjct: 97  AKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE 156

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     NV E   ++  + E      R  +A                            
Sbjct: 157 IG-----NVEEAKHIYHQMPE------RSIIA---------------------------- 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
                S +++ ++   G + EA  LFD M E+D+V W  ++  + +N   EE    FV +
Sbjct: 178 -----SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGM 232

Query: 252 HRSGLCPDDESV-----QCVLGVISDLGKR---------HEEQVQAYAIKLLLYNNNSNV 297
           H+ G+  D+         C   ++ ++GK           E  +      + +Y+   ++
Sbjct: 233 HKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDI 292

Query: 298 VL---------------WNKKLSGYLQVG--DNHGAI----------------------- 317
           ++               WN  +SGYL+    DN  AI                       
Sbjct: 293 MVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQND 352

Query: 318 ------ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
                   F  M  S  + D  T +  ++A A    L  G+ +H    ++G    VI+G 
Sbjct: 353 LFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGT 412

Query: 372 SLINMYSKMGCV-------------------------------------------CGLRT 388
           +LI+MY K GCV                                           C +  
Sbjct: 413 TLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 472

Query: 389 DQFTLASVLRASSSL---PEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           ++ T   VL A   +    EG  H    IH H I+ +          ++D+  R G + E
Sbjct: 473 NEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH----YGCMVDLLGRAGKLQE 528

Query: 445 AEYLFENKDGF-DLATWNAMI 464
           AE L        D+ATW A++
Sbjct: 529 AEELLNRMPMTPDVATWGALL 549



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 27/246 (10%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L+L   +Q S F    ++    S++      + L  GK  HA I  +    +  L   L
Sbjct: 357 TLALFQEMQMSGFKPDETT--LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 414

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY +CG +  A  +F  M ++ + +WN+++   A +G      V     +F ++++  
Sbjct: 415 IDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL-----VESSLDMFSNMKKCH 469

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS------GALVNIYSKFG 208
              + +T   +L  C   G V   E  H +     ++ D  +       G +V++  + G
Sbjct: 470 VTPNEITFMGVLGACRHMGLV--DEGQHHF---YSMIHDHKIQPNVKHYGCMVDLLGRAG 524

Query: 209 KIREAKFLFDGM-QERDVVLWKVMLRAYAENG---FGEEVFHLFVDLHRSGLCPDDESVQ 264
           K++EA+ L + M    DV  W  +L A  ++G    G  V    ++L      PD +   
Sbjct: 525 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQ-----PDHDGFH 579

Query: 265 CVLGVI 270
            +L  I
Sbjct: 580 VLLSNI 585


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 229/685 (33%), Positives = 348/685 (50%), Gaps = 82/685 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A+  +V MI   +  +  TF   L + A
Sbjct: 40  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA 99

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK G+   + V  SLI+MY + G                      
Sbjct: 100 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNG---------------------- 137

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  ++++   +   D V+     TALI  Y   G +A A+ +F+     D+ +WNAM
Sbjct: 138 --RLEDARKVFDQSSHRDVVS----YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 191

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  + N+ +ALELF  M  +  R DE T+ + V AC     ++ G+Q+H++    GF
Sbjct: 192 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGF 251

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y+KCG +  A  +F  +   D ++W T+I G         AL ++ +
Sbjct: 252 GSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 311

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-----LDCSSDPFVGISLVDMY 638
           M  SG  P++ T   ++ A + L A+E GR IH  + K      + SS      SL+DMY
Sbjct: 312 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR---TSLIDMY 368

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG+IE A  +F  +  R+   WNAM+ G A HG       +F  M+ + +EPD +TF+
Sbjct: 369 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 428

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
           G+LSACS++G++      F  M+E Y I P++EHY  ++D LG +G  KEA E+I +M  
Sbjct: 429 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 488

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E    +  +LL AC++ G+ E G+  A+ L+ +EP +  +YVLLSNI+A A +W++V   
Sbjct: 489 EPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 548

Query: 819 RGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDT 855
           R  +  K +KK P                          I+  +E +   ++E G+VPDT
Sbjct: 549 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 608

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN----------------- 896
             VL ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                 
Sbjct: 609 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 668

Query: 897 -KEPLYA---NRFHHLRDGMCPCAD 917
            K  + A    RFHH RDG+C C D
Sbjct: 669 YKREIIARDRTRFHHFRDGVCSCND 693



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 233/524 (44%), Gaps = 96/524 (18%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + +L+ WN++   +A S +           L+  +       +  T  
Sbjct: 38  LPYAISVFETIQEPNLLIWNTMFRGHALSSDP-----VSALYLYVCMISLGLLPNCYTFP 92

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S      + +HG+ LK+G   D +V  +L+++Y + G++ +A+ +FD    R
Sbjct: 93  FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 152

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV +  ++  YA  G+      +F ++                                
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEI-------------------------------- 180

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             IK        +VV WN  +SGY + G+N  A+E F  M+++NV+ D  T +  ++A A
Sbjct: 181 -PIK--------DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 231

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---CGL-------------- 386
            + ++ LG+Q+H      GF S + + N+LI++Y K G V   CGL              
Sbjct: 232 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNT 291

Query: 387 --------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                       +  T+ S+L A + L   + + + IHV+  K 
Sbjct: 292 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG-AIEIGRWIHVYINKR 350

Query: 421 -DTVAD-SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
              VA+ S   T+LID+Y + G +  A+ +F++     L++WNAMIFG+ +   ++ A +
Sbjct: 351 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 410

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDM 536
           +FS M  +    D+IT    + AC    ML  G+ +   +MK  +++   L     ++D+
Sbjct: 411 IFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-SMKEDYKITPKLEHYGCMIDL 469

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
               G   +A+ + N +   PD V W +++  C  +G  +L  S
Sbjct: 470 LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 513



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 188/396 (47%), Gaps = 37/396 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC----RNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           + IH   IK      ++  + LI+ +C        +  A  +FE     +L  WN M  G
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           + LS++   AL L+  M + G   +  T    +K+C      ++G+Q+H + +K G++LD
Sbjct: 63  HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122

Query: 527 LCVSSGILDMYVKCGAMVD-------------------------------AQSIFNDIPA 555
           L V + ++ MYV+ G + D                               AQ +F++IP 
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V+W  MISG  + G    AL ++ +M  + V PDE T   +V A +   ++E GRQ+
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H+ +      S+  +  +L+D+Y KCG +E A  LF+ +  ++ + WN ++ G       
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYS 734
           +E L LF++M   G  P+ VT + +L AC++ G +    + + ++ +   G+     H +
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT 362

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            L+D   + G  + A ++  S+   + +S +  + G
Sbjct: 363 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 398



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 142/308 (46%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G +  A+++FD++P +D++SWN++++ YA +G    
Sbjct: 144 KVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETG---- 199

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            N  E   LF+ + ++       T+  ++  C  S  +     VH +    G   +  + 
Sbjct: 200 -NNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 258

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++Y K G++  A  LF+G+  +DV+ W  ++  Y      +E   LF ++ RSG  
Sbjct: 259 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYNN----------- 293
           P+D ++  +L   + LG             KR +    A + +  L +            
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 378

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                  N ++  WN  + G+   G  + A + F  M ++ ++ D +TF+  L+A + + 
Sbjct: 379 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 438

Query: 347 NLNLGQQI 354
            L+LG+ I
Sbjct: 439 MLDLGRHI 446



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 12/229 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   S++     ++ + LG+  H+ I +     +  + N L+ +Y +CG +  A  LF+ 
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +  +D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 281 LSYKDVISWNTLIGGYTH-----MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+        +L+++Y+K G I  A+ +FD +  R +  W  M
Sbjct: 336 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAM 395

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +A +G     F +F  + ++ + PDD +   +L   S     DLG+
Sbjct: 396 IFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR 444



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 11/151 (7%)

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           +L+ MY++CG +  A+++FD + +R L SWN+++  +A  G  NA      F +F  +R+
Sbjct: 363 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA-----AFDIFSRMRK 417

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYA---LKIGLVWDEFVSGALVNIYSKFGK 209
           +      +T   LL  C  SG +     +        KI    + +  G ++++    G 
Sbjct: 418 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY--GCMIDLLGHSGL 475

Query: 210 IREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
            +EA+ + + M+ E D V+W  +L+A   +G
Sbjct: 476 FKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 224/765 (29%), Positives = 377/765 (49%), Gaps = 97/765 (12%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T    LA LL+ C+      A + +H + L+  L  D F+S  L+  Y+K   I  ++ L
Sbjct: 3   TKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRL 62

Query: 217 FDGMQERDVVLWKVMLRAYAE-------------------------------NGFGEEVF 245
           FD M +RD+  W  +L AY +                               NGF ++  
Sbjct: 63  FDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKAL 122

Query: 246 HLFVDLHRSGLCPDDESVQCVL---GVISDL--GKRHEEQVQAYAIKLLLYNN------- 293
            ++  + R G  P   ++  VL   G + D+  G+R        +IK+ L NN       
Sbjct: 123 GVYYRMSREGFVPTHFTLASVLSACGALVDVECGRR----CHGISIKIGLDNNIYVGNAL 178

Query: 294 ---------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                                  N V +   + G       + A   F  M+R+ +  DS
Sbjct: 179 LGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDS 238

Query: 333 VTF--LVALAAVAGTDNLNL------------GQQIHGTTLKSGFYSAVIVGNSLINMYS 378
           V+   ++ + +  G     L            GQQ+H  T+K GF S + + NSL++MY+
Sbjct: 239 VSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYA 298

Query: 379 KMGCVCGLRTDQFTLASVLRAS-----------SSLPEGLHLSKQIHVHAIKNDTVADSF 427
           K G +         +  V   S           S   + +   +++  H  + D +    
Sbjct: 299 KNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVN 358

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  A I    ++G +     +F+      L++WN ++ GY  + N  +A++LF  M    
Sbjct: 359 MLVACI----KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 414

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              D  T+A  + +   +++L+ G+Q+HA + K+ F  D+ ++SG++ MY KCG +  A+
Sbjct: 415 VHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAK 474

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            IF+ I   D V W +M++G   N  +  A + + +MR  G+ P +F++A ++   + L+
Sbjct: 475 RIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLS 534

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           +L QGRQ+H+ + +    +D FVG +L+DMY+KCG+++ A  +F  M  +NTV WN M+ 
Sbjct: 535 SLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIH 594

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G AQ+G G+E + L+EDM   G +PD +TF+ VL+ACS++GLV    + F+ M++++G+E
Sbjct: 595 GYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE 654

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P V+HY+ ++D+LGRAGR  EA  LI  MP +    +   LL +CRV  D    +  AE+
Sbjct: 655 PLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEE 714

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L  L+P +S+ YVLL+NI+++  +WDD  + R  M    V KDP 
Sbjct: 715 LFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPG 759



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 191/694 (27%), Positives = 307/694 (44%), Gaps = 92/694 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+  I     L GK  HA +L S    D FL+N L+  Y++C ++  +RRLFD+MP R
Sbjct: 10  SLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR 69

Query: 118 DLISWNSILAAYAHSGEGNAENV---------------------TEGFR------LFRSL 150
           D+ +WN+IL AY  + E    +V                       GF        +R  
Sbjct: 70  DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           RE    T   TLA +L  C +   V      HG ++KIGL  + +V  AL+ +Y+K   I
Sbjct: 130 REGFVPT-HFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCI 188

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
            +A   F  + E + V +  M+   A++    E F LF  + R+ +  D  S+  VLGV 
Sbjct: 189 GDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVC 248

Query: 271 SDLG---------------KRHEEQVQAYAIK-------------LLLYNNNSN------ 296
           S  G                 H +QV    IK             L +Y  N N      
Sbjct: 249 SRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEM 308

Query: 297 ---------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                    VV WN  ++GY Q   +  AIE    M     + D +T++  L A   + +
Sbjct: 309 IFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGD 368

Query: 348 LNLGQQIHG----------TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
           +  G+Q+             T+ SG YS        + ++ +M     +  D+ TLA +L
Sbjct: 369 IEAGRQMFDGMSSPSLSSWNTILSG-YSQNENHKEAVKLFREMQ-FRSVHPDRTTLAIIL 426

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTV--ADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
              SSL   + L     VHA+    V   D ++++ LI +Y + G +  A+ +F+     
Sbjct: 427 ---SSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAEL 483

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D+  WN+M+ G  L++   +A   F  M   G    + + AT +  C  L  L QG+Q+H
Sbjct: 484 DIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVH 543

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
           +   + G+  D  V S ++DMY KCG +  A+ +F+ +   + V W  MI G   NG  D
Sbjct: 544 SQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD 603

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--IS 633
            A+ +Y  M  SG  PD  TF  ++ A S    ++ G +I  N ++ +   +P V     
Sbjct: 604 EAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIF-NSMQQEHGVEPLVDHYTC 662

Query: 634 LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
           ++D   + G + +A +L  +M  + + ++W  +L
Sbjct: 663 IIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLL 696



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 29/220 (13%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           +K  F S  S   + ++L      S L  G+  H++I     + D F+ + L+ MYS+CG
Sbjct: 513 EKGMFPSQFS---YATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCG 569

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
            +  AR +FD M  ++ ++WN ++  YA +G G+     E   L+  +  S      +T 
Sbjct: 570 DVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD-----EAVLLYEDMIGSGEKPDGITF 624

Query: 163 APLLKLCLSSGYVWASETV-------HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
             +L  C  SG V     +       HG    +  + D +    +++   + G++ EA+ 
Sbjct: 625 VAVLTACSHSGLVDTGIKIFNSMQQEHG----VEPLVDHYT--CIIDSLGRAGRLHEAEV 678

Query: 216 LFDGMQ-ERDVVLWKVML---RAYAENGF----GEEVFHL 247
           L D M  + D ++W+V+L   R YA+        EE+FHL
Sbjct: 679 LIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHL 718


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 230/707 (32%), Positives = 353/707 (49%), Gaps = 111/707 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQ-- 352
           + VL N  +S + +      A+  F  ++ S +++ D  +F   ++AV    NL      
Sbjct: 126 DTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCT 185

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           Q+H + LKSG  + + V N+LI +Y K    C      +    VL     +P+       
Sbjct: 186 QLHCSVLKSGAAAVLSVSNALIALYMK----CDTPEASWDARKVL---DEMPD------- 231

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSN 471
                       D    T ++  Y R G +  A  +FE  DG FD+  WNAMI GY+ S 
Sbjct: 232 -----------KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDV-VWNAMISGYVQSG 279

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK--SGF--ELDL 527
               A ELF  M +    LDE T  + + AC        GK +H   ++    F  E  L
Sbjct: 280 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAAL 339

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG--------------E 573
            V++ ++ +Y K G +V A+ IF+ +   D V+W T++SG +D+G              +
Sbjct: 340 PVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK 399

Query: 574 EDL-----------------ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
            DL                 AL +++QMR   V P ++T+A  + A   L AL+ GRQ+H
Sbjct: 400 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLH 459

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A+L++    +    G +L+ MYAKCG + DA ++F  M   ++V WNAM+  L QHG+G 
Sbjct: 460 AHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGR 519

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L+LF+ M A G++PD ++F+ +L+AC++ GLV E +  F  M+  +GI P  +HY+ L
Sbjct: 520 EALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARL 579

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D LGR+GR  EA +LI +MPFE + S+  A+L  CR  GD E G + A++L  + P   
Sbjct: 580 IDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 639

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
             Y+LLSN ++AA +W D    R  M+ + VKK+P                       A 
Sbjct: 640 GTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQ 699

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS-- 891
            ++  +E +  R+++ GYVPDT FVL D+E  EKE  L+ HSEKLA  +GL+  PP +  
Sbjct: 700 EVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATV 759

Query: 892 VILSN-------------------KEPLYAN--RFHHLRDGMCPCAD 917
            +L N                   +E +  +  RFHH +DG C C +
Sbjct: 760 TVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 806



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 213/556 (38%), Gaps = 147/556 (26%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVY---ARRLFDKMPDRDLISWNSILAAYAHS 132
           H  +L S       ++N L+ +Y +C +      AR++ D+MPD+D ++W +++  Y   
Sbjct: 188 HCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRR 247

Query: 133 GEGNAEN--------------------------VTEGFRLFRSLRESITFTSRLTLAPLL 166
           G+ NA                              + F LFR +          T   +L
Sbjct: 248 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 307

Query: 167 KLCLSSGYVWASETVHGYALKI--GLVWDEF--VSGALVNIYSKFGKIREAKFLFDGMQE 222
             C ++G+    ++VHG  +++    V +    V+ ALV +YSK GKI  AK +FD M  
Sbjct: 308 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 367

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           +DVV W  +L  Y ++G  ++   +F                                  
Sbjct: 368 KDVVSWNTILSGYIDSGCLDKAVEVF---------------------------------- 393

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               K++ Y N+   + W   +SGY+  G +  A++ F  M   +V+    T+  A+AA 
Sbjct: 394 ----KVMPYKND---LSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 446

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
                L  G+Q+H   ++ GF ++   GN+L+ MY+K G V   R     + ++      
Sbjct: 447 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL------ 500

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                                 DS    A+I    ++G   EA                 
Sbjct: 501 ----------------------DSVSWNAMISALGQHGHGREA----------------- 521

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
                         LELF  M   G   D I+  T + AC    ++ +G   H +     
Sbjct: 522 --------------LELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG--FHYF---ES 562

Query: 523 FELDLCVSSG------ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
            + D  +S G      ++D+  + G + +A+ +   +P  P    W  ++SGC  NG  D
Sbjct: 563 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG--D 620

Query: 576 LALSIYHQMRLSGVVP 591
           +    Y   +L  ++P
Sbjct: 621 MEFGAYAADQLFRMIP 636



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 183/397 (46%), Gaps = 51/397 (12%)

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFDLATWNAMIFGYILSNNSHKA 476
           ++D       +T+L+  +   G + +A   F+       D    NAM+  +  ++ +  A
Sbjct: 87  RSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPA 146

Query: 477 LELFSHMHTSGE-RLDEITIATAVKACGCL--LMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           + +F  +  SG  R D+ +    + A G +  L      Q+H   +KSG    L VS+ +
Sbjct: 147 VSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNAL 206

Query: 534 LDMYVKCG---AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM------ 584
           + +Y+KC    A  DA+ + +++P  DD+ WTTM+ G V  G+ + A S++ ++      
Sbjct: 207 IALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDV 266

Query: 585 ----RLSGVVP---------------------DEFTFAILVKASSCLTALEQGRQIHANL 619
                +SG V                      DEFTF  ++ A +       G+ +H  +
Sbjct: 267 VWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQI 326

Query: 620 IKLDCSSDPFVGI----SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           I+L  +  P   +    +LV +Y+K G I  A  +F  M++++ V WN +L G    G  
Sbjct: 327 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 386

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           ++ +++F+ M       + ++++ ++S   + GL  +A + F+ MR +  ++P    Y+ 
Sbjct: 387 DKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAG 441

Query: 736 LVDALGRAGRTKEAGEL---ILSMPFEASASMHRALL 769
            + A G  G  K   +L   ++   FEAS S   ALL
Sbjct: 442 AIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 478



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 36/250 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARI--LNSSQIPDRFL--TNNLMTMYSRCGSLVYARRLFDK 113
           S+L    +    + GKS H +I  L  + +P+  L   N L+T+YS+ G +V A+R+FD 
Sbjct: 305 SVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDT 364

Query: 114 MPDRDLISWNSILAAYAHSG-----------------------------EGNAENVTEGF 144
           M  +D++SWN+IL+ Y  SG                              G +E   +  
Sbjct: 365 MNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE---DAL 421

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           +LF  +R         T A  +  C   G +     +H + ++ G         AL+ +Y
Sbjct: 422 KLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMY 481

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G + +A+ +F  M   D V W  M+ A  ++G G E   LF  +   G+ PD  S  
Sbjct: 482 AKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 541

Query: 265 CVLGVISDLG 274
            +L   +  G
Sbjct: 542 TILTACNHAG 551



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 11/172 (6%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA ++           N L+TMY++CG++  AR +F  MP+ D +SWN++++A   
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 514

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY-ALK--I 188
            G G      E   LF  +        R++   +L  C  +G V   E  H + ++K   
Sbjct: 515 HGHGR-----EALELFDQMVAEGIDPDRISFLTILTACNHAGLV--DEGFHYFESMKRDF 567

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
           G+   E     L+++  + G+I EA+ L   M  E    +W+ +L     NG
Sbjct: 568 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 619


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 233/797 (29%), Positives = 392/797 (49%), Gaps = 102/797 (12%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           L  +L+ C+S  ++     VHG A+  GL   D  +   LV +Y    + R+A  +F  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 221 QERDVVL---WKVMLRAYAENG--FGEEVFHLFVDLHRSGLCPDDESVQCV------LGV 269
                     W  ++R     G      +F+L +  H S   PD  +   V      LG 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 270 IS----------DLGKRHEEQVQAYAIKL-----LLYNNNS--------NVVLWNKKLSG 306
           I+           LG   +  V +  IK+     LL++           + VLWN  + G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y++ G    A+E F +M  S  + +  T    L+  A   +L  G Q+H   +K G  S 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 367 VIVGNSLINMYSKMGCV------------------------------------------- 383
           V V N+L++MY+K  C+                                           
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G+R D  TL S+L A + L  G +  K++H + ++N    D F+ +AL+D+Y +  ++ 
Sbjct: 342 SGIRPDSVTLVSLLPALTDL-NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A+ ++++    D+   + MI GY+L+  S +A+++F ++   G R + + IA+ + AC 
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            +  +K G+++H+YA+K+ +E    V S ++DMY KCG +  +  IF+ I A D+V W +
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MIS    NGE + AL+++ +M + GV     T + ++ A + L A+  G++IH  +IK  
Sbjct: 521 MISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP 580

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             +D F   +L+DMY KCGN+E A+ +F+ M  +N V WN+++     +G  +E++ L  
Sbjct: 581 IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLR 640

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M+  G + D VTF+ ++SAC++ G V E    F  M E+Y I P +EH++ +VD   RA
Sbjct: 641 HMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRA 700

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G+  +A ELI+ MPF+  A +  ALL ACRV  + E  +  +++L  L+P +S  YVL+S
Sbjct: 701 GKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           NI A A +WD V+  R  MK   V+K P                       ++ I+  ++
Sbjct: 761 NINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLK 820

Query: 841 GLIKRIKEGGYVPDTDF 857
            ++  ++E GY+P  D 
Sbjct: 821 SILLELREEGYIPMPDL 837



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 179/700 (25%), Positives = 305/700 (43%), Gaps = 86/700 (12%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSS-QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
            ++LR  +S S L LG   H R + +     D  L   L+ MY        A  +F  +P
Sbjct: 43  LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP 102

Query: 116 DRDL---ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
                  + WN ++     +G+  +  +   F L      S       T   ++K C + 
Sbjct: 103 RGAAACALPWNWLIRGLTMAGDYRSALL---FYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G +     VH  A  +GL  D FV  AL+ +Y+  G + +A+ +FDGM ERD VLW VM+
Sbjct: 160 GAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI---SDL-------------GKR 276
             Y + G       LF D+  SG  P+  ++ C L V    SDL             G  
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 277 HEEQVQAYAI-------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            E  V    +             KL       ++V WN  +SG +Q G    A+  F +M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            +S ++ DSVT +  L A+   +  N G+++HG  +++  +  V + ++L+++Y K   V
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 384 -------------------------------------------CGLRTDQFTLASVLRAS 400
                                                       G+R +   +ASVL A 
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           +S+   + L +++H +A+KN      +V +AL+D+Y + G +  + Y+F      D  TW
Sbjct: 460 ASM-AAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTW 518

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N+MI  +  +    +AL LF  M   G +   +TI++ + AC  L  +  GK++H   +K
Sbjct: 519 NSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK 578

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
                DL   S ++DMY KCG +  A  +F  +P  ++V+W ++I+     G    ++S+
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSL 638

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI---KLDCSSDPFVGISLVDM 637
              M+  G   D  TF  LV A +    +++G ++   +    ++    + F    +VD+
Sbjct: 639 LRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFA--CMVDL 696

Query: 638 YAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           Y++ G ++ A  L   M  + +  +W A+L     H N E
Sbjct: 697 YSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVE 736



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 271/619 (43%), Gaps = 104/619 (16%)

Query: 37  SLLPFLQK-SHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +LL +L+  +H S+    S  F  +++   +   + LG+  H          D F+ + L
Sbjct: 128 ALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSAL 187

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY+  G L  AR++FD M +RD + WN ++  Y  +G     +V+    LF  +R S 
Sbjct: 188 IKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAG-----SVSSAVELFGDMRASG 242

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  TLA  L +  +   ++    +H  A+K GL  +  V+  LV++Y+K   + +  
Sbjct: 243 CEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGW 302

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL- 273
            LF  M   D+V W  M+    +NGF ++   LF D+ +SG+ PD  ++  +L  ++DL 
Sbjct: 303 KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362

Query: 274 GKRHEEQVQAYAIKLLLY----------------------------NNNSNVVLWNKKLS 305
           G    +++  Y ++  ++                            +   +VV+ +  +S
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY+  G +  A++ F  ++   ++ ++V     L A A    + LGQ++H   LK+ +  
Sbjct: 423 GYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEG 482

Query: 366 AVIVGNSLINMYSKMG-------------------------------------------C 382
              V ++L++MY+K G                                           C
Sbjct: 483 RCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMC 542

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           + G++    T++SVL A +SLP  ++  K+IH   IK    AD F  +ALID+Y + G++
Sbjct: 543 MEGVKYSNVTISSVLSACASLP-AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNL 601

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  +FE+    +  +WN++I  Y       +++ L  HM   G + D +T    V AC
Sbjct: 602 EWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSAC 661

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVS------------SGILDMYVKCGAMVDAQSIF 550
                       HA  ++ G  L  C++            + ++D+Y + G +  A  + 
Sbjct: 662 A-----------HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELI 710

Query: 551 NDIP-APDDVAWTTMISGC 568
            D+P  PD   W  ++  C
Sbjct: 711 VDMPFKPDAGIWGALLHAC 729


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 224/721 (31%), Positives = 358/721 (49%), Gaps = 88/721 (12%)

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN---NSNVVLWNK 302
            L   + R+ L P    +  +L + S+L   H+         LL++N+       + W  
Sbjct: 26  QLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDS--------LLIFNSLPSPPTTLAWKS 76

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            +  Y   G    ++  F+ M+ S    D   F   L +     +L  G+ +HG  ++ G
Sbjct: 77  IIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLG 136

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
               +   N+L+NMYSK           ++L  V        EG    K   V++ K   
Sbjct: 137 MGFDLYTCNALMNMYSKF----------WSLEEVNTYKKVFDEG----KTSDVYSKKEK- 181

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             +S+   +L  V             FE     D+ +WN +I G   +     AL +   
Sbjct: 182 --ESYYLGSLRKV-------------FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVRE 226

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M  +  R D  T+++ +      + L +GK++H YA+++G++ D+ + S ++DMY KC  
Sbjct: 227 MGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTR 286

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + D+  +F  +P  D ++W ++I+GCV NG  D  L  + QM ++ + P+  +F+ ++ A
Sbjct: 287 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + LT L  G+Q+H  +I+     + F+  +LVDMYAKCGNI  A  +F +M++ + V W
Sbjct: 347 CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSW 406

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
            AM++G A HG+  + + LF+ M+  GV+P+ V F+ VL+ACS+ GLV EA++ F+ M +
Sbjct: 407 TAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 466

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            Y I P +EHY+ + D LGR GR +EA E I  M  E + S+   LL ACRV  + E  +
Sbjct: 467 DYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAE 526

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------- 832
            V++KL  ++P +  AYVLLSNI++AA +W D    R  M+ K +KK PA          
Sbjct: 527 KVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKV 586

Query: 833 -------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
                        D I   ++ L+++++  GYV DT  VL DVEEE+K   L  HSE+LA
Sbjct: 587 HAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLA 646

Query: 880 RAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCA 916
             +G+ISTP  + I   K                            +RFHH +DG C C 
Sbjct: 647 ITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCG 706

Query: 917 D 917
           D
Sbjct: 707 D 707



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 184/395 (46%), Gaps = 35/395 (8%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           + T Q    ++L+  SS+      +KQ+H   ++    + S +ST ++ +Y     + ++
Sbjct: 1   MNTTQNLCKTLLQNPSSVKSKSQ-AKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDS 58

Query: 446 EYLFENKDGFDLA-TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
             +F +         W ++I  Y        +L  F  M  SG+  D     + +K+C  
Sbjct: 59  LLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTL 118

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS---------------- 548
           +  L+ G+ +H   ++ G   DL   + +++MY K  ++ +  +                
Sbjct: 119 MKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSK 178

Query: 549 -------------IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
                        +F  +P  D V+W T+ISG   NG  + AL +  +M  + + PD FT
Sbjct: 179 KEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFT 238

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            + ++   +    L +G++IH   I+    +D F+G SL+DMYAKC  ++D+  +F  + 
Sbjct: 239 LSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY-TGLVSEAY 714
             + + WN+++ G  Q+G  +E LK F+ M    ++P+ V+F  ++ AC++ T L     
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            + +++R ++  +  V   S LVD   + G  + A
Sbjct: 359 LHGYIIRSRF--DGNVFIASALVDMYAKCGNIRTA 391



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/464 (21%), Positives = 199/464 (42%), Gaps = 81/464 (17%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L++  S       K  HA+IL +S +P   L + ++++YS    L  +  +F+ +P  
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTS-LPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 118 DL-ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
              ++W SI+  Y   G             F  +  S  +        +LK C     + 
Sbjct: 69  PTTLAWKSIIRCYTSHGL-----FLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLR 123

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA----------------------- 213
             E+VHG  +++G+ +D +   AL+N+YSKF  + E                        
Sbjct: 124 FGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKES 183

Query: 214 ------KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
                 + +F+ M +RD+V W  ++   A+NG  E+   +  ++  + L PD  ++  VL
Sbjct: 184 YYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243

Query: 268 GVISD-LGKRHEEQVQAYAIK-------------LLLYNNNSNV---------------V 298
            + ++ +     +++  YAI+             + +Y   + V               +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            WN  ++G +Q G     ++ F  M+ + ++ + V+F   + A A    L+LG+Q+HG  
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLR--TDQFTLASVLRASSSLP---------EGL 407
           ++S F   V + ++L++MY+K G +   R   D+  L  ++  ++ +          + +
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 423

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
            L K++ V  +K + VA   V TA     C +  + +  + + N
Sbjct: 424 SLFKRMEVEGVKPNYVAFMAVLTA-----CSHAGLVDEAWKYFN 462



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 11/225 (4%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           +LL GK  H   + +    D F+ ++L+ MY++C  +  + R+F  +P  D ISWNSI+A
Sbjct: 251 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
               +G  +     EG + F+ +  +    + ++ + ++  C     +   + +HGY ++
Sbjct: 311 GCVQNGMFD-----EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
                + F++ ALV++Y+K G IR A+++FD M+  D+V W  M+  YA +G   +   L
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 425

Query: 248 FVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAI 286
           F  +   G+ P+  +   VL      G++ +  K      Q Y I
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRI 470



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 36/313 (11%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGC 568
           Q KQ+HA  +++       +S+ IL +Y     + D+  IFN +P+P   +AW ++I   
Sbjct: 23  QAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G    +LS + QM  SG  PD   F  ++K+ + +  L  G  +H  +I+L    D 
Sbjct: 82  TSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDL 141

Query: 629 FVGISLVDMYAKCGNIE-----------------------DAYIL------FKQMDMRNT 659
           +   +L++MY+K  ++E                       ++Y L      F+ M  R+ 
Sbjct: 142 YTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDI 201

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA-CSYTGLVSEAYENFH 718
           V WN ++ G AQ+G  E+ L +  +M    + PDS T   VL     Y  L+    +  H
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG--KEIH 259

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
               + G + +V   S L+D   +  R  ++  +   +P     S + +++  C   G  
Sbjct: 260 GYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN-SIIAGCVQNGMF 318

Query: 779 ETG-KWVAEKLMA 790
           + G K+  + L+A
Sbjct: 319 DEGLKFFQQMLIA 331



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 22/210 (10%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFL 90
           L  F   L+  ++ +H S SS       I+      + L LGK  H  I+ S    + F+
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSS-------IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFI 374

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            + L+ MY++CG++  AR +FDKM   D++SW +++  YA  G     +  +   LF+ +
Sbjct: 375 ASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG-----HAYDAISLFKRM 429

Query: 151 RESITFTSRLTLAPLLKLCLSSGYV-----WASETVHGYALKIGLVWDEFVSGALVNIYS 205
                  + +    +L  C  +G V     + +     Y +  GL  + +   A+ ++  
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGL--EHY--AAVADLLG 485

Query: 206 KFGKIREA-KFLFDGMQERDVVLWKVMLRA 234
           + G++ EA +F+ D   E    +W  +L A
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 231/684 (33%), Positives = 347/684 (50%), Gaps = 102/684 (14%)

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG--FYSAVIVGNSL-------INMY 377
           N Q+ +++ L+   A++   NL+    +  +  +     ++ +I GNSL       I+ Y
Sbjct: 62  NTQF-ALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFY 120

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
            +M  +CG+  + +T   +L++ + +       KQIH H +K    +D FV T+LI++Y 
Sbjct: 121 VRM-LLCGVEPNSYTFPFLLKSCAKV-GATQEGKQIHGHVLKLGLESDPFVHTSLINMYA 178

Query: 438 RNGSMAEAEY-------------------------------LFENKDGFDLATWNAMIFG 466
           +NG +  AE                                LFE     D  +WNAMI G
Sbjct: 179 QNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG 238

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y  S    +AL  F  M  +    +E T+ T + AC     L+ G  + ++    G   +
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSN 298

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           L + + ++DMY KCG +  A+ +F  I   D ++W  MI G         AL+++ +M+ 
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI-------SLVDMYA 639
           S V P++ TF  ++ A + L AL+ G+ IHA + K       F+G+       SL+DMYA
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK------KFLGLTNTSLWTSLIDMYA 412

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCGNIE A  +F  M  ++   WNAM+ GLA HG+    L+LF  M+  G EPD +TF+G
Sbjct: 413 KCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVG 472

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           VLSACS+ GLV    + F  M E Y I P+++HY  ++D LGRAG   EA  L+ +M  +
Sbjct: 473 VLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK 532

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
              ++  +LLGACRV G+ E G++ A+ L  LEP +  AYVLLSNI+A A +WDDV   R
Sbjct: 533 PDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIR 592

Query: 820 GEMKRKNVKKDP----------------ADLIFAKVEGLIKRIKE-------GGYVPDTD 856
            ++  K +KK P                 D +  + + + K + E        G+VPDT 
Sbjct: 593 TKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTS 652

Query: 857 FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LS 895
            VL D++EE KE +L +HSEKLA A+GLIST P + I                     + 
Sbjct: 653 EVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIF 712

Query: 896 NKEPLY--ANRFHHLRDGMCPCAD 917
           N+E +    NRFHH +DG C C D
Sbjct: 713 NREIIARDRNRFHHFKDGSCSCMD 736



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 35/394 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC---RNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           KQIH   IK       F  + LI+ +C     G+++ A  LFE+ +  +   WN MI G 
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            LS++   A++ +  M   G   +  T    +K+C  +   ++GKQ+H + +K G E D 
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167

Query: 528 CVSSGILDMYVKC-------------------------------GAMVDAQSIFNDIPAP 556
            V + +++MY +                                G + DA+ +F +IP  
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W  MI+G   +G  + AL+ + +M+ + V P+E T   ++ A +   +LE G  + 
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           + +      S+  +  +L+DMY+KCG+++ A  LF+ +  ++ + WN M+ G +   + +
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L LF  M+   VEP+ VTF+ +L AC+Y G +         + +K+        ++ L
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           +D   + G  + A ++   M  ++  S +  + G
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 240/519 (46%), Gaps = 36/519 (6%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNI--YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           + +H   +K GL   +F    L+     S FG +  A  LF+ +++ +  +W  M+R  +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNS 295
            +         +V +   G+ P+  +   +L   + +G   E +Q+  + +KL L    S
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGL---ES 165

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +  +    ++ Y Q G+   A   F    +S+++ D+V+F   +        L+  +++ 
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFS---KSSLR-DAVSFTALITGYTLRGCLDDARRL- 220

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV------------CGLRTDQFTLASVLRA---S 400
               +       +  N++I  Y++ G                +  ++ T+ +VL A   S
Sbjct: 221 ---FEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQS 277

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
            SL  G  +   I  H + ++      +  ALID+Y + G + +A  LFE     D+ +W
Sbjct: 278 GSLELGNWVRSWIEDHGLGSNLR----LVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N MI GY   N+  +AL LF  M  S    +++T  + + AC  L  L  GK +HAY  K
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK 393

Query: 521 SGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
               L +  + + ++DMY KCG +  A+ +F  +      +W  MISG   +G  ++AL 
Sbjct: 394 KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALE 453

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMY 638
           ++ QMR  G  PD+ TF  ++ A S    +E GRQ  +++++  D S        ++D+ 
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLL 513

Query: 639 AKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            + G  ++A  L K M+M+ +  +W ++L     HGN E
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 43/309 (13%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + + S + D      L+T Y+  G L  ARRLF+++P RD +SWN+++A YA SG     
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR---- 244

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
              E    F+ ++ +    +  T+  +L  C  SG +     V  +    GL  +  +  
Sbjct: 245 -FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVN 303

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++YSK G + +A+ LF+G+ E+D++ W VM+  Y+     +E   LF  + +S + P
Sbjct: 304 ALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEP 363

Query: 259 DDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNSNVVL-------------- 299
           +D +   +L   +     DLGK     + AY  K  L   N+++                
Sbjct: 364 NDVTFVSILPACAYLGALDLGK----WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEA 419

Query: 300 ---------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                          WN  +SG    G  + A+E F  M     + D +TF+  L+A + 
Sbjct: 420 AKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSH 479

Query: 345 TDNLNLGQQ 353
              + LG+Q
Sbjct: 480 AGLVELGRQ 488



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 8/243 (3%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  +L  F +    + + + S   ++L     +  L LG    + I +     +  L N 
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MYS+CG L  AR LF+ + ++D+ISWN ++  Y+H       +  E   LFR +++S
Sbjct: 305 LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH-----MNSYKEALALFRKMQQS 359

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIR 211
               + +T   +L  C   G +   + +H Y  K  +GL  +  +  +L+++Y+K G I 
Sbjct: 360 NVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIE 418

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            AK +F GM+ + +  W  M+   A +G       LF  +   G  PDD +   VL   S
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478

Query: 272 DLG 274
             G
Sbjct: 479 HAG 481



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 176/432 (40%), Gaps = 96/432 (22%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKS------THARILNSSQ 84
           L SFS SL+      HF  +S     + +L++  S + L   KS       H++I+ +  
Sbjct: 3   LASFSPSLVMPPPTLHFQPTSDPP--YKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGL 60

Query: 85  IPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
              +F  + L+     S  G+L YA  LF+ +   +   WN+++                
Sbjct: 61  HNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMI---------------R 105

Query: 143 GFRLFRSLRESITFTSRL----------TLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  L  S   +I F  R+          T   LLK C   G     + +HG+ LK+GL  
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165

Query: 193 DEFVSGALVNIYSKFGK-------------------------------IREAKFLFDGMQ 221
           D FV  +L+N+Y++ G+                               + +A+ LF+ + 
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR 276
            RD V W  M+  YA++G  EE    F ++ R+ + P++ ++  VL   +     +LG  
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNW 285

Query: 277 HEEQVQAYAI--KLLLYNN----------------------NSNVVLWNKKLSGYLQVGD 312
               ++ + +   L L N                         +++ WN  + GY  +  
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNS 345

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGN 371
              A+  F  M +SNV+ + VTF+  L A A    L+LG+ IH    K     +   +  
Sbjct: 346 YKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405

Query: 372 SLINMYSKMGCV 383
           SLI+MY+K G +
Sbjct: 406 SLIDMYAKCGNI 417


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  358 bits (919), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 234/716 (32%), Positives = 359/716 (50%), Gaps = 92/716 (12%)

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           N  ++VV WN  +S Y   G    A+  F  M ++ V  ++ T + AL A   +    LG
Sbjct: 72  NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLG 131

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
            +IH   LKS     V V N+L+ M+ + G +                            
Sbjct: 132 MEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQN 191

Query: 384 ----------CGL-----RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                     CGL     + D+ +L S+L AS  L   L+  K+IH +A+KN   ++  +
Sbjct: 192 GLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLN-GKEIHAYAMKNWLDSNLRI 250

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
              LID+Y +   +A A  +F+     DL +W  +I  Y  +N   +AL+L   + T G 
Sbjct: 251 GNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGM 310

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            +D + I + + AC  L  L   K++H Y +K G   DL + + I+D+Y  CG +  A  
Sbjct: 311 DVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATR 369

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F  I   D V+WT+MIS  V NG  + AL +++ M+ + V PD  T   ++ A++ L+A
Sbjct: 370 MFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSA 429

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L +G++IH  + +     +     SLVDMYA CG++E+AY +F     ++ VLW  M+  
Sbjct: 430 LNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINA 489

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG G+  ++LF  M+   + PD +TF+ +L ACS++GL++E       M+ KY +EP
Sbjct: 490 YGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEP 549

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
             EHY+ LVD LGRA   +EA   + SM  E +A +  A LGACR+  + + G+  A+KL
Sbjct: 550 WPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKL 609

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------- 831
           + L+P    +YVL+SN+FAA+ +W DV   R  MK   +KK+P                 
Sbjct: 610 LDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVR 669

Query: 832 ------ADLIFAKVEGLIKRI-KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                 +  I+ K+  + +++ KEGGYVP T  VL +V +EEK + LY HSE+LA AYGL
Sbjct: 670 DKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGL 729

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           +ST   + I   K                           A+RFHH  DG+C C D
Sbjct: 730 MSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGD 785



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 256/576 (44%), Gaps = 101/576 (17%)

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V +DS TF   L A    ++++ G +IHG  +K G+ S V V NSL++MY+K   + G R
Sbjct: 6   VPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGAR 65

Query: 388 --------------------------------------------TDQFTLASVLRA--SS 401
                                                        + +TL + L+A   S
Sbjct: 66  KLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDS 125

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           S  +   L  +IH   +K++ V D +V+ AL+ ++ R G M+ A  +F+  D  D  TWN
Sbjct: 126 SFKK---LGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWN 182

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           +MI G+  +   ++AL+ F  +  +  + DE+++ + + A G L  L  GK++HAYAMK+
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN 242

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
             + +L + + ++DMY KC  +  A  +F+ +   D ++WTT+I+    N     AL + 
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
            +++  G+  D       + A S L  L   +++H   +K    SD  +   ++D+YA C
Sbjct: 303 RKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADC 361

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV- 700
           GNI  A  +F+ +  ++ V W +M+     +G   E L +F  MK   VEPDS+T + + 
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSIL 421

Query: 701 ------------------------------------LSACSYTGLVSEAYENFHLMREKY 724
                                               + AC   G +  AY+ F   R K 
Sbjct: 422 SAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYAC--CGSLENAYKVFICTRSK- 478

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH---RALLGACRVQGDTETG 781
                +  ++ +++A G  GR K A EL   M  +     H    ALL AC   G    G
Sbjct: 479 ----SLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEG 534

Query: 782 KWVAEKLMA---LEPFDSSAYVLLSNIFAAANQWDD 814
           K + E +     LEP+    Y  L ++   AN  ++
Sbjct: 535 KRLLETMKCKYQLEPWPEH-YACLVDLLGRANHLEE 569



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/540 (24%), Positives = 237/540 (43%), Gaps = 79/540 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR- 117
           +L+      D+  G   H  I+        F+ N+L++MY++C  ++ AR+LFD+M +R 
Sbjct: 16  VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERN 75

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWNSI++AY+ +G+       E   LFR ++++    +  TL   L+ C  S +   
Sbjct: 76  DVVSWNSIISAYSLNGQ-----CMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   LK   V D +V+ ALV ++ +FGK+  A  +FD + E+D + W  M+  + +
Sbjct: 131 GMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQ 190

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN--- 293
           NG   E    F  L  + L PD+ S+  +L     LG   + +++ AYA+K  L +N   
Sbjct: 191 NGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRI 250

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                    N +++ W   ++ Y Q   +  A++    +    +
Sbjct: 251 GNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGM 310

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
             D++     L A +G   L+  +++HG TLK G  S +++ N +I++Y+  G +     
Sbjct: 311 DVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATR 369

Query: 384 ------C----------------GLRTDQFTLASVLRASSSLPEGLHL------------ 409
                 C                GL  +   +  +++ +S  P+ + L            
Sbjct: 370 MFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSA 429

Query: 410 ---SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
               K+IH    +   + +     +L+D+Y   GS+  A  +F       L  W  MI  
Sbjct: 430 LNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINA 489

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y +      A+ELFS M       D IT    + AC    ++ +GK++    MK  ++L+
Sbjct: 490 YGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL-LETMKCKYQLE 548



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 127/234 (54%), Gaps = 1/234 (0%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G   D  T    +KACG +  + +G ++H   +K G++  + V++ ++ MY KC  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 543 MVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
           ++ A+ +F+ +   +D V+W ++IS    NG+   AL ++ +M+ +GV  + +T    ++
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A    +  + G +IHA ++K +   D +V  +LV M+ + G +  A  +F ++D ++ + 
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
           WN+M+ G  Q+G   E L+ F  ++   ++PD V+ I +L+A    G +    E
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 147/327 (44%), Gaps = 35/327 (10%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            SIL  +     LL GK  HA  + +    +  + N L+ MYS+C  + YA  +FDKM +
Sbjct: 217 ISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMIN 276

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +DLISW +++AAYA   + N    TE  +L R ++        + +   L  C     + 
Sbjct: 277 KDLISWTTVIAAYA---QNNCH--TEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLS 331

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
            ++ VHGY LK GL  D  +   ++++Y+  G I  A  +F+ ++ +DVV W  M+  Y 
Sbjct: 332 HAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYV 390

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQ 280
            NG   E   +F  +  + + PD  ++  +L                G I   G   E  
Sbjct: 391 HNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGS 450

Query: 281 -----VQAYAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                V  YA         K+ +   + ++VLW   ++ Y   G    A+E F  M    
Sbjct: 451 TVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQK 510

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +  D +TFL  L A + +  +N G+++
Sbjct: 511 LIPDHITFLALLYACSHSGLINEGKRL 537


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 221/589 (37%), Positives = 319/589 (54%), Gaps = 62/589 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSM 442
           GL  D FTL++V+ A     + + L  Q+H  A+ +    DS+VS   AL+  Y +NG +
Sbjct: 135 GLDMDXFTLSAVITACC---DDVGLIGQLHSVAVSSGF--DSYVSVNNALLTYYGKNGDL 189

Query: 443 AEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
            +A+ +F    G  D  +WN+MI  Y       KAL LF  M   G  +D  T+A+ + A
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA-MVDAQSIFNDIPAPDDVA 560
             CL  L  G Q H   +K+GF  +  V SG++D+Y KCG  M D + +F +I  PD V 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 561 WTTMISGCVDNGE--EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           W TM+SG   N E  ED AL  + QM+  G  P++ +F  ++ A S L++  QG+QIH+ 
Sbjct: 310 WNTMVSGYSQNEEFLED-ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 619 LIKLDCSSDPF-VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +K D  S+   V  +L+ MY+KCGN++DA  LF +M   NTV  N+M+ G AQHG   E
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
           +L LF+ M    + P S+TFI VLSAC++TG V E +  F++M+EK+ IEPE EHYS ++
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGRAG+  EA  LI  MPF   +    +LLGACR  G+ E     A +++ LEP +++
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
            YV+LSN++A+A +W++V + R  M+ + VKK P                          
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKE 608

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLD---VEEEEKERALYYHSEKLARAYGLISTPPSS 891
           I+  +E +  ++K  GYVPD  + L+        EKE  L +HSEKLA A+GLIST    
Sbjct: 609 IYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGE 668

Query: 892 VILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            +L  K                           A+RFH  ++G C C D
Sbjct: 669 PVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGD 717



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 36/450 (8%)

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           +L+ G+ +H   +KS    +    N  I +YSK G +   R                   
Sbjct: 23  DLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARK------------------ 64

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
                     A ++ +  + F   A+I  Y +      A  LF+     DL ++N +I  
Sbjct: 65  ----------AFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISA 114

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y     +  AL LFS M   G  +D  T++  + AC C  +   G Q+H+ A+ SGF+  
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDXFTLSAVITAC-CDDVGLIG-QLHSVAVSSGFDSY 172

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           + V++ +L  Y K G + DA+ +F  +    D+V+W +MI     + E   AL ++ +M 
Sbjct: 173 VSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMV 232

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC-GNI 644
             G+  D FT A ++ A +CL  L  G Q H  LIK     +  VG  L+D+Y+KC G +
Sbjct: 233 RRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGM 292

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNG-EETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            D   +F+++   + VLWN M+ G +Q+    E+ L+ F  M+  G  P+  +F+ V+SA
Sbjct: 293 SDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISA 352

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS     S+  +   L  +       +   + L+    + G  ++A  L   M    + S
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS 412

Query: 764 MHRALLGACRVQGDTET---GKWVAEKLMA 790
           ++  + G  +   + E+    +W+ E+ +A
Sbjct: 413 LNSMIAGYAQHGIEMESLHLFQWMLERQIA 442



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 246/595 (41%), Gaps = 138/595 (23%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR--------- 109
           +L+  I+  DL  GKS H+  + S   P  + +N+ + +YS+CG L +AR+         
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 110 ----------------------LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
                                 LFD++P+ DL+S+N++++AYA  GE           LF
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-----TAPALGLF 128

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS--GALVNIYS 205
             +RE        TL+ ++  C     V     +H  A+  G  +D +VS   AL+  Y 
Sbjct: 129 SGMREMGLDMDXFTLSAVITACCDD--VGLIGQLHSVAVSSG--FDSYVSVNNALLTYYG 184

Query: 206 KFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           K G + +AK +F GM   RD V W  M+ AY ++  G +   LF ++ R GL  D  ++ 
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLA 244

Query: 265 CVLGVISDLGKRHEE-QVQAYAIKLLLYNNN----------------------------- 294
            VL   + L       Q     IK   + N+                             
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE 304

Query: 295 SNVVLWNKKLSGYLQVGDN-HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            ++VLWN  +SGY Q  +    A+ECF  M     + +  +F+  ++A +   + + G+Q
Sbjct: 305 PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ 364

Query: 354 IHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           IH   LKS   S  I V N+LI MYSK G                         L  +++
Sbjct: 365 IHSLALKSDIPSNRISVDNALIAMYSKCG------------------------NLQDARR 400

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +     +++TV+      ++I  Y ++G   E+ +LF+         W  M+   I   +
Sbjct: 401 LFDRMAEHNTVS----LNSMIAGYAQHGIEMESLHLFQ---------W--MLERQIAPTS 445

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS-- 530
                               IT  + + AC     +++G   +   MK  F ++      
Sbjct: 446 --------------------ITFISVLSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHY 484

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           S ++D+  + G + +A+++   +P  P  + W +++  C  +G  +LA+   +Q+
Sbjct: 485 SCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV 539



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 6/223 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS-LVYARRLFDKMPD 116
           S+L       DL  G   H +++ +    +  + + L+ +YS+CG  +   R++F+++ +
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE 304

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            DL+ WN++++ Y+     N E + +    FR ++      +  +   ++  C +     
Sbjct: 305 PDLVLWNTMVSGYSQ----NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS 360

Query: 177 ASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
             + +H  ALK  +  +   V  AL+ +YSK G +++A+ LFD M E + V    M+  Y
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           A++G   E  HLF  +    + P   +   VL   +  G+  E
Sbjct: 421 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEE 463



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 6/190 (3%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F  L+K       L  G+ +H+  IK       +     + +Y+KCG +  A   F+ + 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             N   +NA++   A+        +LF+ +     EPD V++  ++SA +  G  + A  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALG 126

Query: 716 NFHLMREKYGIEPEVEHYSFLVDA-LGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
            F  MRE  G++ +    S ++ A     G   +   + +S  F++  S++ ALL     
Sbjct: 127 LFSGMRE-MGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185

Query: 775 QGDTETGKWV 784
            GD +  K V
Sbjct: 186 NGDLDDAKRV 195


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 221/589 (37%), Positives = 319/589 (54%), Gaps = 62/589 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSM 442
           GL  D FTL++V+ A     + + L  Q+H  A+ +    DS+VS   AL+  Y +NG +
Sbjct: 135 GLDMDGFTLSAVITACC---DDVGLIGQLHSVAVSSGF--DSYVSVNNALLTYYGKNGDL 189

Query: 443 AEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
            +A+ +F    G  D  +WN+MI  Y       KAL LF  M   G  +D  T+A+ + A
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA-MVDAQSIFNDIPAPDDVA 560
             CL  L  G Q H   +K+GF  +  V SG++D+Y KCG  M D + +F +I  PD V 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 561 WTTMISGCVDNGE--EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           W TM+SG   N E  ED AL  + QM+  G  P++ +F  ++ A S L++  QG+QIH+ 
Sbjct: 310 WNTMVSGYSQNEEFLED-ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 619 LIKLDCSSDPF-VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +K D  S+   V  +L+ MY+KCGN++DA  LF +M   NTV  N+M+ G AQHG   E
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
           +L LF+ M    + P S+TFI VLSAC++TG V E +  F++M+EK+ IEPE EHYS ++
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGRAG+  EA  LI  MPF   +    +LLGACR  G+ E     A +++ LEP +++
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
            YV+LSN++A+A +W++V + R  M+ + VKK P                          
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKE 608

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLD---VEEEEKERALYYHSEKLARAYGLISTPPSS 891
           I+  +E +  ++K  GYVPD  + L+        EKE  L +HSEKLA A+GLIST    
Sbjct: 609 IYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGE 668

Query: 892 VILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            +L  K                           A+RFH  ++G C C D
Sbjct: 669 PVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGD 717



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 207/451 (45%), Gaps = 38/451 (8%)

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           +L+ G+ +H   +KS    +    N  I +YSK G +   R                   
Sbjct: 23  DLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARK------------------ 64

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
                     A ++ +  + F   A+I  Y +      A  LF+     DL ++N +I  
Sbjct: 65  ----------AFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISA 114

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y     +  AL LFS M   G  +D  T++  + AC C  +   G Q+H+ A+ SGF+  
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDGFTLSAVITAC-CDDVGLIG-QLHSVAVSSGFDSY 172

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           + V++ +L  Y K G + DA+ +F  +    D+V+W +MI     + E   AL ++ +M 
Sbjct: 173 VSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMV 232

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC-GNI 644
             G+  D FT A ++ A +CL  L  G Q H  LIK     +  VG  L+D+Y+KC G +
Sbjct: 233 RRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGM 292

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNG-EETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            D   +F+++   + VLWN M+ G +Q+    E+ L+ F  M+  G  P+  +F+ V+SA
Sbjct: 293 SDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISA 352

Query: 704 CSYTGLVSEAYENFHLMREKYGIEP-EVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           CS     S+  +  H +  K  I    +   + L+    + G  ++A  L   M    + 
Sbjct: 353 CSNLSSPSQG-KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411

Query: 763 SMHRALLGACRVQGDTET---GKWVAEKLMA 790
           S++  + G  +   + E+    +W+ E+ +A
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 246/595 (41%), Gaps = 138/595 (23%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR--------- 109
           +L+  I+  DL  GKS H+  + S   P  + +N+ + +YS+CG L +AR+         
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 110 ----------------------LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
                                 LFD++P+ DL+S+N++++AYA  GE           LF
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-----TAPALGLF 128

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS--GALVNIYS 205
             +RE        TL+ ++  C     V     +H  A+  G  +D +VS   AL+  Y 
Sbjct: 129 SGMREMGLDMDGFTLSAVITACCDD--VGLIGQLHSVAVSSG--FDSYVSVNNALLTYYG 184

Query: 206 KFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           K G + +AK +F GM   RD V W  M+ AY ++  G +   LF ++ R GL  D  ++ 
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLA 244

Query: 265 CVLGVISDLGKRHEE-QVQAYAIKLLLYNNN----------------------------- 294
            VL   + L       Q     IK   + N+                             
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE 304

Query: 295 SNVVLWNKKLSGYLQVGDN-HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            ++VLWN  +SGY Q  +    A+ECF  M     + +  +F+  ++A +   + + G+Q
Sbjct: 305 PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ 364

Query: 354 IHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           IH   LKS   S  I V N+LI MYSK G                         L  +++
Sbjct: 365 IHSLALKSDIPSNRISVDNALIAMYSKCG------------------------NLQDARR 400

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +     +++TV+      ++I  Y ++G   E+ +LF+         W  M+   I   +
Sbjct: 401 LFDRMAEHNTVS----LNSMIAGYAQHGIEMESLHLFQ---------W--MLERQIAPTS 445

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS-- 530
                               IT  + + AC     +++G   +   MK  F ++      
Sbjct: 446 --------------------ITFISVLSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHY 484

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           S ++D+  + G + +A+++   +P  P  + W +++  C  +G  +LA+   +Q+
Sbjct: 485 SCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV 539



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 6/223 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS-LVYARRLFDKMPD 116
           S+L       DL  G   H +++ +    +  + + L+ +YS+CG  +   R++F+++ +
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE 304

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            DL+ WN++++ Y+     N E + +    FR ++      +  +   ++  C +     
Sbjct: 305 PDLVLWNTMVSGYSQ----NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS 360

Query: 177 ASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
             + +H  ALK  +  +   V  AL+ +YSK G +++A+ LFD M E + V    M+  Y
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           A++G   E  HLF  +    + P   +   VL   +  G+  E
Sbjct: 421 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEE 463



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 6/190 (3%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F  L+K       L  G+ +H+  IK       +     + +Y+KCG +  A   F+ + 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             N   +NA++   A+        +LF+ +     EPD V++  ++SA +  G  + A  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALG 126

Query: 716 NFHLMREKYGIEPEVEHYSFLVDA-LGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
            F  MRE  G++ +    S ++ A     G   +   + +S  F++  S++ ALL     
Sbjct: 127 LFSGMRE-MGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185

Query: 775 QGDTETGKWV 784
            GD +  K V
Sbjct: 186 NGDLDDAKRV 195


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 235/774 (30%), Positives = 362/774 (46%), Gaps = 141/774 (18%)

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           +A ++   L+ ++  V  WN+ +   + +G     ++ +  M R   + D  TF   L A
Sbjct: 95  KALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKA 154

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------ 383
                +   G  +H     SGF   V VGN L++MY + G                    
Sbjct: 155 CGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDL 214

Query: 384 -----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         G+R D  +L +VL A +S+       KQ+H
Sbjct: 215 VSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV-GAWSRGKQVH 273

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY------- 467
            +A+++    D FV  A++D+Y + G M EA  +FE     D+ +WNAM+ GY       
Sbjct: 274 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 333

Query: 468 -----------------------ILSNNSHK-----ALELFSHMHTSGERLDEITIATAV 499
                                  +++  + +     AL++F  M   G   + +T+ + +
Sbjct: 334 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLL 393

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELD-------LCVSSGILDMYVKCGAMVDAQSIFND 552
             C     L  GK+ H +A+K    LD       L V + ++DMY KC +   A+++F+ 
Sbjct: 394 SGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 453

Query: 553 IPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRLSG--VVPDEFTFAILVKASSCLTA 608
           IP  D   V WT +I G   +GE + AL ++ QM      V+P+ FT +  + A + L A
Sbjct: 454 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 513

Query: 609 LEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           L  GRQIHA +++    S   FV   L+DMY+K G+++ A ++F  M  RN V W +++ 
Sbjct: 514 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 573

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G   HG GEE L++F +M+   + PD VTF+ VL ACS++G+V +    F+ M + +G+ 
Sbjct: 574 GYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 633

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P  EHY+ +VD L RAGR  EA ELI  MP + + ++  ALL ACRV  + E G++ A +
Sbjct: 634 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 693

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------- 831
           L+ LE  +  +Y LLSNI+A A  W DV   R  MK   +KK P                
Sbjct: 694 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 753

Query: 832 -------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  +  I+  +  L++RIK  GYVPD  F L DV++EEK   L  HSEKLA AYG+
Sbjct: 754 GDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGI 813

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           ++T P + I   K                           ++RFHH ++G C C
Sbjct: 814 LTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSC 867



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 182/693 (26%), Positives = 311/693 (44%), Gaps = 95/693 (13%)

Query: 39  LPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARIL------NSSQIPDRFLTN 92
           L FL    FS++SS++   S L H   +  L   + TH ++L      + + I   +LT 
Sbjct: 33  LLFLTTFFFSTASSTTDLTSTLFHQCKS--LASAELTHQQLLVQGLPHDPTHIISMYLTF 90

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           N     S   +L   RRL        +  WN ++    H G      + +  +L+R ++ 
Sbjct: 91  N-----SPAKALSVLRRLHPS--SHTVFWWNQLIRRSVHLG-----FLEDVLQLYRRMQR 138

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                   T   +LK C          +VH      G  W+ FV   LV++Y + G    
Sbjct: 139 LGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWEN 198

Query: 213 AKFLFDGMQER---DVVLWKVMLRAYAENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLG 268
           A+ +FD M+ER   D+V W  ++ AY + G       +F  +    G+ PD  S+  VL 
Sbjct: 199 ARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLP 258

Query: 269 VISDLGK-RHEEQVQAYAIKLLLYNN----------------------------NSNVVL 299
             + +G     +QV  YA++  L+ +                              +VV 
Sbjct: 259 ACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS 318

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  ++GY Q+G    A+  F  +    ++ + VT+   +A                   
Sbjct: 319 WNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG------------------ 360

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
               Y+   +G   ++++ +M  +CG   +  TL S+L   +S    LH  K+ H HAIK
Sbjct: 361 ----YAQRGLGFEALDVFRQM-LLCGSEPNVVTLVSLLSGCASAGTLLH-GKETHCHAIK 414

Query: 420 -------NDTVADSFVSTALIDVY--CRNGSMAEAEY-LFENKDGFDLATWNAMIFGYIL 469
                  ND   D  V  ALID+Y  C++   A A + L   KD   + TW  +I G   
Sbjct: 415 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDR-SVVTWTVLIGGNAQ 473

Query: 470 SNNSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD- 526
              +++ALELFS M      +  +  TI+ A+ AC  L  L+ G+Q+HAY +++ FE   
Sbjct: 474 HGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM 533

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           L V++ ++DMY K G +  A+ +F+++   + V+WT++++G   +G  + AL I+++M+ 
Sbjct: 534 LFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 593

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNI 644
             +VPD  TF +++ A S    ++QG   + N +  D    P       +VD+ ++ G +
Sbjct: 594 VXLVPDGVTFVVVLYACSHSGMVDQGIN-YFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652

Query: 645 EDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGE 676
           ++A  L + M M+ T  +W A+L     + N E
Sbjct: 653 DEAMELIRGMPMKPTPAVWVALLSACRVYANVE 685


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 230/705 (32%), Positives = 352/705 (49%), Gaps = 111/705 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQ-- 352
           + VL N  +S + +      A+  F  ++ S +++ D  +F   ++AV    NL      
Sbjct: 124 DTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCT 183

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           Q+H + LKSG  + + V N+LI +Y K    C      +    VL     +P+       
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMK----CDTPEASWDARKVL---DEMPD------- 229

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSN 471
                       D    T ++  Y R G +  A  +FE  DG FD+  WNAMI GY+ S 
Sbjct: 230 -----------KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDV-VWNAMISGYVQSG 277

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK--SGF--ELDL 527
               A ELF  M +    LDE T  + + AC        GK +H   ++    F  E  L
Sbjct: 278 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAAL 337

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG--------------E 573
            V++ ++ +Y K G +V A+ IF+ +   D V+W T++SG +D+G              +
Sbjct: 338 PVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK 397

Query: 574 EDL-----------------ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
            DL                 AL +++QMR   V P ++T+A  + A   L AL+ GRQ+H
Sbjct: 398 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLH 457

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A+L++    +    G +L+ MYAKCG + DA ++F  M   ++V WNAM+  L QHG+G 
Sbjct: 458 AHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGR 517

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L+LF+ M A G++PD ++F+ +L+AC++ GLV E +  F  M+  +GI P  +HY+ L
Sbjct: 518 EALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARL 577

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D LGR+GR  EA +LI +MPFE + S+  A+L  CR  GD E G + A++L  + P   
Sbjct: 578 IDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 637

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
             Y+LLSN ++AA +W D    R  M+ + VKK+P                       A 
Sbjct: 638 GTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQ 697

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS-- 891
            ++  +E +  R+++ GYVPDT FVL D+E  EKE  L+ HSEKLA  +GL+  PP +  
Sbjct: 698 EVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATV 757

Query: 892 VILSN-------------------KEPLYAN--RFHHLRDGMCPC 915
            +L N                   +E +  +  RFHH +DG C C
Sbjct: 758 TVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 213/556 (38%), Gaps = 147/556 (26%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVY---ARRLFDKMPDRDLISWNSILAAYAHS 132
           H  +L S       ++N L+ +Y +C +      AR++ D+MPD+D ++W +++  Y   
Sbjct: 186 HCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRR 245

Query: 133 GEGNAEN--------------------------VTEGFRLFRSLRESITFTSRLTLAPLL 166
           G+ NA                              + F LFR +          T   +L
Sbjct: 246 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 305

Query: 167 KLCLSSGYVWASETVHGYALKI--GLVWDEF--VSGALVNIYSKFGKIREAKFLFDGMQE 222
             C ++G+    ++VHG  +++    V +    V+ ALV +YSK GKI  AK +FD M  
Sbjct: 306 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 365

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           +DVV W  +L  Y ++G  ++   +F                                  
Sbjct: 366 KDVVSWNTILSGYIDSGCLDKAVEVF---------------------------------- 391

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
               K++ Y N+   + W   +SGY+  G +  A++ F  M   +V+    T+  A+AA 
Sbjct: 392 ----KVMPYKND---LSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 444

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
                L  G+Q+H   ++ GF ++   GN+L+ MY+K G V   R     + ++      
Sbjct: 445 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL------ 498

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                                 DS    A+I    ++G   EA                 
Sbjct: 499 ----------------------DSVSWNAMISALGQHGHGREA----------------- 519

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
                         LELF  M   G   D I+  T + AC    ++ +G   H +     
Sbjct: 520 --------------LELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG--FHYF---ES 560

Query: 523 FELDLCVSSG------ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
            + D  +S G      ++D+  + G + +A+ +   +P  P    W  ++SGC  NG  D
Sbjct: 561 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG--D 618

Query: 576 LALSIYHQMRLSGVVP 591
           +    Y   +L  ++P
Sbjct: 619 MEFGAYAADQLFRMIP 634



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 179/387 (46%), Gaps = 51/387 (13%)

Query: 429 STALIDVYCRNGSMAEAEYLFE--NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +T+L+      G + +A   F+       D    NAM+  +  ++ +  A+ +F  +  S
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 487 GE-RLDEITIATAVKACGCL--LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG-- 541
           G  R D+ +    + A G +  L      Q+H   +KSG    L VS+ ++ +Y+KC   
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 542 -AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM----------RLSGVV 590
            A  DA+ + +++P  DD+ WTTM+ G V  G+ + A S++ ++           +SG V
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 591 P---------------------DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
                                 DEFTF  ++ A +       G+ +H  +I+L  +  P 
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 630 VGI----SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
             +    +LV +Y+K G I  A  +F  M++++ V WN +L G    G  ++ +++F+ M
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
                  + ++++ ++S   + GL  +A + F+ MR +  ++P    Y+  + A G  G 
Sbjct: 395 PYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGA 449

Query: 746 TKEAGEL---ILSMPFEASASMHRALL 769
            K   +L   ++   FEAS S   ALL
Sbjct: 450 LKHGRQLHAHLVQCGFEASNSAGNALL 476



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 36/250 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARI--LNSSQIPDRFL--TNNLMTMYSRCGSLVYARRLFDK 113
           S+L    +    + GKS H +I  L  + +P+  L   N L+T+YS+ G +V A+R+FD 
Sbjct: 303 SVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDT 362

Query: 114 MPDRDLISWNSILAAYAHSG-----------------------------EGNAENVTEGF 144
           M  +D++SWN+IL+ Y  SG                              G +E   +  
Sbjct: 363 MNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE---DAL 419

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           +LF  +R         T A  +  C   G +     +H + ++ G         AL+ +Y
Sbjct: 420 KLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMY 479

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G + +A+ +F  M   D V W  M+ A  ++G G E   LF  +   G+ PD  S  
Sbjct: 480 AKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 539

Query: 265 CVLGVISDLG 274
            +L   +  G
Sbjct: 540 TILTACNHAG 549



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 11/172 (6%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA ++           N L+TMY++CG++  AR +F  MP+ D +SWN++++A   
Sbjct: 453 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 512

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY-ALK--I 188
            G G      E   LF  +        R++   +L  C  +G V   E  H + ++K   
Sbjct: 513 HGHGR-----EALELFDQMVAEGIDPDRISFLTILTACNHAGLV--DEGFHYFESMKRDF 565

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
           G+   E     L+++  + G+I EA+ L   M  E    +W+ +L     NG
Sbjct: 566 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 204/665 (30%), Positives = 338/665 (50%), Gaps = 75/665 (11%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W   +  Y   G  H ++  F+ M+ S +  D   F   L + A   +LNLG+ +HG  +
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH-VHAI 418
           + G    +  GN+L+NMYSK      LR  + +    L A     E    ++ +  V  +
Sbjct: 134 RVGLDFDLYTGNALMNMYSK------LRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVL 187

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
             D+V                        +FE     DL +WN +I G   +    + L 
Sbjct: 188 SEDSV----------------------RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           +   M  +  + D  T+++ +      + + +GK++H  +++ G + D+ V+S ++DMY 
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC  + D+  +F  +   D ++W ++I+GCV NG  D  L  + QM ++ + P  ++F+ 
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A + LT L  G+Q+H  + +     + F+  SLVDMYAKCGNI  A  +F +M +R+
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V W AM++G A HG   + ++LFE M+  G++P+ V F+ VL+ACS+ GLV EA++ F+
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M   +GI P VEHY+ + D LGRAGR +EA + I  M    + S+   LL ACRV  + 
Sbjct: 466 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           +  + VA +++ ++P ++ AY+LL+NI++AA +W +    R  M+R  ++K PA      
Sbjct: 526 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 585

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                            + I   +E L++ +++ GYVPDT  V  DVEEE+K+  +  HS
Sbjct: 586 KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 645

Query: 876 EKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGM 912
           E+LA  +G+I+TP    I   K                            +RFHH ++G 
Sbjct: 646 ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 705

Query: 913 CPCAD 917
           C C D
Sbjct: 706 CSCGD 710



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 226/489 (46%), Gaps = 30/489 (6%)

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           IYS    + ++  LF+ +     + WK ++R Y  +G   +    F+ +  SGL PD   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 263 V-----QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH-GA 316
                  C L +  +LG+     +    +   LY  N+ + +++K L    + G    GA
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK-LRFLEESGRQRLGA 167

Query: 317 IECFVNMIRSNVQYDSVTFLVA------LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
            E F  M        +V+ L           +   D ++    I G   ++G Y   +  
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNA-RNGLYEETL-- 224

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS--KQIHVHAIKNDTVADSFV 428
                M  +MG    L+ D FTL+SVL     + E + +S  K+IH  +I+    AD +V
Sbjct: 225 ----RMIREMGGA-NLKPDSFTLSSVL---PLIAENVDISRGKEIHGCSIRQGLDADIYV 276

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +++LID+Y +   +A++  +F      D  +WN++I G + +    + L  F  M  +  
Sbjct: 277 ASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKI 336

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           +    + ++ + AC  L  L  GKQ+H Y  ++GF+ ++ ++S ++DMY KCG +  A+ 
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           IF+ +   D V+WT MI GC  +G+   A+ ++ QM   G+ P+   F  ++ A S    
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGL 456

Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAM 665
           +++  + + N +  D    P V    ++ D+  + G +E+AY     M +  T  +W  +
Sbjct: 457 VDEAWK-YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATL 515

Query: 666 LVGLAQHGN 674
           L     H N
Sbjct: 516 LSACRVHXN 524



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       D+  GK  H   +      D ++ ++L+ MY++C  +  + R+F  + +R
Sbjct: 244 SVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER 303

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ISWNSI+A    +G  +     EG R FR +  +       + + ++  C     +  
Sbjct: 304 DGISWNSIIAGCVQNGLFD-----EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHL 358

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HGY  + G   + F++ +LV++Y+K G IR AK +FD M+ RD+V W  M+   A 
Sbjct: 359 GKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCAL 418

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G   +   LF  +   G+ P+  +   VL   S  G
Sbjct: 419 HGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGG 455



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/469 (21%), Positives = 195/469 (41%), Gaps = 89/469 (18%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR+ +S       +  HA++L   Q       + L+++YS    L  + RLF+ +   
Sbjct: 11  ALLRNPLSIKSRSQAQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFP 69

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W S++  Y   G  +     +    F  +  S  +        +LK C     +  
Sbjct: 70  PALAWKSVIRCYTSHGLPH-----QSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNL 124

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA------------------------ 213
            E++HGY +++GL +D +   AL+N+YSK   + E+                        
Sbjct: 125 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTV 184

Query: 214 --------KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
                   + +F+ M E+D+V W  ++   A NG  EE   +  ++  + L PD  ++  
Sbjct: 185 SVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSS 244

Query: 266 VLGVIS---DLGKRHE------------------EQVQAYA--------IKLLLYNNNSN 296
           VL +I+   D+ +  E                    +  YA         ++       +
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERD 304

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            + WN  ++G +Q G     +  F  M+ + ++  S +F   + A A    L+LG+Q+HG
Sbjct: 305 GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 364

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-----DQFTLASVLRASSSL-------- 403
              ++GF   + + +SL++MY+K G    +RT     D+  L  ++  ++ +        
Sbjct: 365 YITRNGFDENIFIASSLVDMYAKCG---NIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421

Query: 404 -PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
            P+ + L +Q+    IK + VA   V TA     C +G + +  + + N
Sbjct: 422 APDAIELFEQMETEGIKPNHVAFMAVLTA-----CSHGGLVDEAWKYFN 465



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 38/315 (12%)

Query: 510 QGKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           Q +Q+HA  +K  F+   LC  S +L +Y     + D+  +FN I  P  +AW ++I   
Sbjct: 24  QAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCY 81

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G    +L  +  M  SG+ PD   F  ++K+ + L  L  G  +H  +I++    D 
Sbjct: 82  TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141

Query: 629 FVGISLVDMYAKCGNIEDA--------------------------------YILFKQMDM 656
           + G +L++MY+K   +E++                                  +F+ M  
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           ++ V WN ++ G A++G  EETL++  +M    ++PDS T   VL   +    +S   E 
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE- 260

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            H    + G++ ++   S L+D   +  R  ++   + ++  E       +++  C   G
Sbjct: 261 IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR-VFTLLTERDGISWNSIIAGCVQNG 319

Query: 777 DTETG-KWVAEKLMA 790
             + G ++  + LMA
Sbjct: 320 LFDEGLRFFRQMLMA 334



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SI+      + L LGK  H  I  +    + F+ ++L+ MY++CG++  A+++FD+M  R
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR 404

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
           D++SW +++   A  G+       +   LF  +       + +    +L  C   G V  
Sbjct: 405 DMVSWTAMIMGCALHGQA-----PDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDE 459

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV-VLWKVML--- 232
           A +  +      G+        A+ ++  + G++ EA     GM       +W  +L   
Sbjct: 460 AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSAC 519

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYA 285
           R +      E+V +  +++      P++     +L  I    +R +E  +  A
Sbjct: 520 RVHXNIDMAEKVANRILEVD-----PNNTGAYILLANIYSAARRWKEAAKWRA 567


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 245/840 (29%), Positives = 385/840 (45%), Gaps = 158/840 (18%)

Query: 166 LKLCLS--SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
           L+LCL      +  +  VHG  +  G      +   L+++Y K  ++  A+ LFD + E 
Sbjct: 19  LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78

Query: 224 DVVLWKVMLRAYAENG---FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           D +    M+  Y  +G       VF       ++ +C  D                    
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFE------KAPVCMRD-------------------- 112

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                            V++N  ++G+    D + AI  F  M     + D+ TF   LA
Sbjct: 113 ----------------TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156

Query: 341 AVA-GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
            +A   D+     Q H   LKSG      V N+L+++YSK                    
Sbjct: 157 GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK-------------------- 196

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLA 458
            +S P  LH ++++    ++ D  +     T ++  Y +NG     E L E   D   L 
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERS----WTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            +NAMI GY+      +ALE+   M +SG  LDE T  + ++AC    +L+ GKQ+HAY 
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312

Query: 519 MKS---GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT------------ 563
           ++     F  D    + ++ +Y KCG   +A++IF  +PA D V+W              
Sbjct: 313 LRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368

Query: 564 -------------------MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                              MISG  +NG  +  L ++  M+  G  P ++ F+  +K+ +
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L A   G+Q HA L+K+   S    G +L+ MYAKCG +E+A  +F+ M   ++V WNA
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           ++  L QHG+G E + ++E+M   G+ PD +T + VL+ACS+ GLV +  + F  M   Y
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVY 548

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV 784
            I P  +HY+ L+D L R+G+  +A  +I S+PF+ +A +  ALL  CRV G+ E G   
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIA 608

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD-------------- 830
           A+KL  L P     Y+LLSN+ AA  QW++V   R  M+ + VKK+              
Sbjct: 609 ADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHT 668

Query: 831 ---------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE-EKERALYYHSEKLAR 880
                     A+ ++  ++ L K ++  GYVPDT FVL DVE +  KE  L  HSEK+A 
Sbjct: 669 FLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAV 728

Query: 881 AYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           A+GL+  PP + I                     +  ++ +  +  RFHH R+G C C +
Sbjct: 729 AFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGN 788



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 175/683 (25%), Positives = 298/683 (43%), Gaps = 118/683 (17%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSILAAYAHSGEG-NAENV-- 140
           PD+     +++ Y   G +  AR +F+K P   RD + +N+++  ++H+ +G +A N+  
Sbjct: 78  PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137

Query: 141 ---TEGFRLFRSLRESITFTSRLTLAPLL----KLCLSSGYVWASETVHGYALKIGLVWD 193
               EGF+      ++ TF S L    L+    K C+           H  ALK G  + 
Sbjct: 138 KMKHEGFK-----PDNFTFASVLAGLALVADDEKQCVQ---------FHAAALKSGAGYI 183

Query: 194 EFVSGALVNIYSKFGK----IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
             VS ALV++YSK       +  A+ +FD + E+D   W  M+  Y +NG+         
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY--------- 234

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
                                 DLG   EE ++         ++N  +V +N  +SGY+ 
Sbjct: 235 ---------------------FDLG---EELLEG-------MDDNMKLVAYNAMISGYVN 263

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A+E    M+ S ++ D  T+   + A A    L LG+Q+H   L+   +S    
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHF 322

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
            NSL+++Y K G                             K     AI     A   VS
Sbjct: 323 DNSLVSLYYKCG-----------------------------KFDEARAIFEKMPAKDLVS 353

Query: 430 -TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             AL+  Y  +G + EA+ +F+     ++ +W  MI G   +    + L+LFS M   G 
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
              +   + A+K+C  L     G+Q HA  +K GF+  L   + ++ MY KCG + +A+ 
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F  +P  D V+W  +I+    +G    A+ +Y +M   G+ PD  T   ++ A S    
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGL 533

Query: 609 LEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
           ++QGR+   ++    ++   +D +    L+D+  + G   DA  + + +  + T  +W A
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEA 591

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           +L G   HGN E  L +    K  G+ P+   T++ + +  + TG   E      LMR++
Sbjct: 592 LLSGCRVHGNME--LGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649

Query: 724 --------YGIEPEVEHYSFLVD 738
                     IE E + ++FLVD
Sbjct: 650 GVKKEVACSWIEMETQVHTFLVD 672



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 27/243 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   +   L LGK  HA +L        F  N+L+++Y +CG    AR +F+KMP +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAK 349

Query: 118 DLISWNSILAAYAHSGE------------------------GNAENV--TEGFRLFRSLR 151
           DL+SWN++L+ Y  SG                         G AEN    EG +LF  ++
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                      +  +K C   G     +  H   LKIG         AL+ +Y+K G + 
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +F  M   D V W  ++ A  ++G G E   ++ ++ + G+ PD  ++  VL   S
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529

Query: 272 DLG 274
             G
Sbjct: 530 HAG 532



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 193/465 (41%), Gaps = 103/465 (22%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGS----LVYARRLFDKMPDRDLISWNSILAAYAH 131
           HA  L S       ++N L+++YS+C S    L  AR++FD++ ++D  SW +++  Y  
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231

Query: 132 SG---------EGNAENVT------------------EGFRLFRSLRESITFTSRLTLAP 164
           +G         EG  +N+                   E   + R +  S       T   
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291

Query: 165 LLKLCLSSGYVWASETVHGYALK------------IGLVW-----------------DEF 195
           +++ C ++G +   + VH Y L+            + L +                  + 
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL 351

Query: 196 VS-GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           VS  AL++ Y   G I EAK +F  M+E++++ W +M+   AENGFGEE   LF  + R 
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
           G  P D +    +   + LG       Q Y  +LL    +S++   N  ++ Y +     
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNG--QQYHAQLLKIGFDSSLSAGNALITMYAKC---- 465

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
           G +E    + R+    DSV++   +AA        LGQ  HG                 +
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAA--------LGQHGHGA--------------EAV 503

Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV------ADSFV 428
           ++Y +M    G+R D+ TL +VL A S       L  Q   +    +TV      AD + 
Sbjct: 504 DVYEEM-LKKGIRPDRITLLTVLTACSHAG----LVDQGRKYFDSMETVYRIPPGADHYA 558

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLA-TWNAMIFGYILSNN 472
              LID+ CR+G  ++AE + E+      A  W A++ G  +  N
Sbjct: 559 R--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 234/849 (27%), Positives = 389/849 (45%), Gaps = 140/849 (16%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           D+ +   ++ +Y+  G   +++  FD ++ +++  W  ++ +Y+ N    EV  +F+ + 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMI 178

Query: 252 HRSGLCPDDESVQCVLGV---ISDLG---KRHEEQVQAYAIKLLLYNN------------ 293
            ++ L PD+ +  CV+     ISD+G     H   V+   ++ L   N            
Sbjct: 179 SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFV 238

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        N+V WN  +  +   GD+   +             D  T +  L   
Sbjct: 239 SDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMP------------DVATVVTVLPVC 286

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG----------------- 385
           A    + +G+ +HG  +K      ++V N+L++MYSK GC+                   
Sbjct: 287 AREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWN 346

Query: 386 ----------------------------LRTDQFTLASVLRA---SSSLPEGLHLSKQIH 414
                                       ++ D+ T+ + +      S LP      K++H
Sbjct: 347 TMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPS----LKELH 402

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            +++K + V D  ++ A +  Y + GS++ A+ +F       L +WNA+I GY  S++  
Sbjct: 403 CYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPR 462

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            +L+    M  SG   D  T+ + + AC  L  L+ GK++H + +++  E DL V   +L
Sbjct: 463 LSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 522

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            +Y+ CG +   Q +F+ +     V+W T+I+G + NG  + AL ++ QM L G+ P   
Sbjct: 523 SLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGI 582

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           +   +  A S L +L  GR+ HA  +K     + F+  S++DMYAK G I  +  +F  +
Sbjct: 583 SMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGL 642

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             ++   WNAM++G   HG  +E +KLFE+M+  G  PD +TF+GVL+AC+++GL+ E  
Sbjct: 643 KEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGL 702

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
                M+  +G++P ++HY+ ++D LGRAG+   A  +   M  E    +  +LL  CR+
Sbjct: 703 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRI 762

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-- 832
             + E G+ VA KL  LEP     YVLLSN++A   +WDDV   R  MK  +++KD    
Sbjct: 763 HQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCS 822

Query: 833 -----DLIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                  +F+ V G                L  +I + GY PDT  V  D+ EEEK   L
Sbjct: 823 WIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQL 882

Query: 872 YYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA------------NRFHHL 908
             HSEKLA  YGLI T   + +             N   L +             RFHH 
Sbjct: 883 RGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHF 942

Query: 909 RDGMCPCAD 917
             G C C D
Sbjct: 943 NKGFCSCGD 951



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 191/722 (26%), Positives = 310/722 (42%), Gaps = 126/722 (17%)

Query: 52  SSSQWFSILRHAI--------STSDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCG 102
           SSS  F ++R A+           D+ +G+  H  +  S+++  D  L   ++TMY+ CG
Sbjct: 75  SSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCG 134

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLT 161
           S   +R  FD +  ++L  WN+++++Y+ +     E   E   +F + + ++       T
Sbjct: 135 SPDDSRSAFDALRSKNLFQWNAVISSYSRN-----ELYHEVLEMFIKMISKTHLLPDNFT 189

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
              ++K C     V     VHG  +K GLV D FV  ALV+ Y   G + +A  LFD M 
Sbjct: 190 FPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-- 279
           ER++V W  M+R +++NG                  PD  +V  VL V +    R  E  
Sbjct: 250 ERNLVSWNSMIRVFSDNG------------DDGAFMPDVATVVTVLPVCA----REREIG 293

Query: 280 ---QVQAYAIKLLL----------------------------YNNNSNVVLWNKKLSGYL 308
               V  +A+KL L                             NNN NVV WN  + G+ 
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFS 353

Query: 309 QVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
             GD HG  +    M+    +V+ D VT L A+        L   +++H  +LK  F   
Sbjct: 354 AEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYD 413

Query: 367 VIVGNSLINMYSKMGCV------------------------------------------- 383
            ++ N+ +  Y+K G +                                           
Sbjct: 414 ELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKN 473

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            GL  D FT+ S+L A S L + L L K++H   I+N    D FV  +++ +Y   G + 
Sbjct: 474 SGLLPDNFTVCSLLSACSKL-KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 532

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
             + LF+  +   L +WN +I G++ +    +AL LF  M   G +   I++ T   AC 
Sbjct: 533 TVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS 592

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L+ G++ HAYA+K   E +  ++  I+DMY K GA+  +  +FN +      +W  
Sbjct: 593 LLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNA 652

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI G   +G    A+ ++ +M+ +G  PD+ TF         LTA      +H  L  LD
Sbjct: 653 MIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFL------GVLTACNHSGLLHEGLRYLD 706

Query: 624 CSSDPFVGIS--------LVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGN 674
                F G+         ++DM  + G +++A  +  +M     V +WN++L     H N
Sbjct: 707 QMKSSF-GLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQN 765

Query: 675 GE 676
            E
Sbjct: 766 LE 767



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 47/311 (15%)

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           R  SS P   + S  I      N T A+ F+    I  +C  G + ++  + +   G D 
Sbjct: 21  RKESSFPRADYNSNAIS----SNSTNANHFLRR--ISNFCETGDLDKSFRVVQEFAGDDE 74

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           ++ +  +          +AL L   +  SG+R D                ++ G+++H  
Sbjct: 75  SSSDVFLL-------VREALGLL--LQASGKRKD----------------IEMGRKIHHL 109

Query: 518 AMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
              S     D  + + I+ MY  CG+  D++S F+ + + +   W  +IS    N     
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169

Query: 577 ALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            L ++ +M   + ++PD FTF  ++KA + ++ +  G  +H  ++K     D FVG +LV
Sbjct: 170 VLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALV 229

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDS 694
             Y   G + DA  LF  M  RN V WN+M             +++F D    G   PD 
Sbjct: 230 SFYGTHGFVSDALKLFDIMPERNLVSWNSM-------------IRVFSDNGDDGAFMPDV 276

Query: 695 VTFIGVLSACS 705
            T + VL  C+
Sbjct: 277 ATVVTVLPVCA 287


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 210/585 (35%), Positives = 310/585 (52%), Gaps = 64/585 (10%)

Query: 293 NNSNVVLWNKKLSGYLQVGD--NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            N +VV WN  ++GY Q G       +E F  M   N   +  TF     A + +     
Sbjct: 72  TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------------- 388
           G Q H   +K+  +  V VG+SLINMY K+GC+   R                       
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191

Query: 389 ---------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                                D+F   SVL A + +P+ +H  KQIH  A+KN  ++ + 
Sbjct: 192 ERMAFEAWELFLLMRREEGAHDKFIYTSVLSALT-VPDLVHYGKQIHCLALKNGLLSIAS 250

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  AL+ +Y + G + +A   FE     D  TW+AMI GY  + +SH+AL LF +MH +G
Sbjct: 251 VGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            +  E T    + AC  +  L++GKQ+H Y++K+G+E  +    G   +  KCG++VDA+
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDAR 370

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
             F+ +  PD V WT+                   +M++  ++P E T A +++A S L 
Sbjct: 371 KGFDYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSLA 412

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           ALEQG+QIHA  IK   S +  +G +L  MYAKCG++ED  ++F++M  R+ + WNAM+ 
Sbjct: 413 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 472

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GL+Q+G G + L+LFE+++    +PD VTF+ VLSACS+ GLV      F +M +++GI 
Sbjct: 473 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGII 532

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P VEHY+ +VD L RAG+  E  E I S   +    + R LLGACR   + E G +  EK
Sbjct: 533 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 592

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           LM L   +SSAY+LLS+I+ A  + DDV   R  MK + V K+P 
Sbjct: 593 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPG 637



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 232/509 (45%), Gaps = 60/509 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L       DL  GK+ HA++L +      +LTN+L+ +Y++CGS+V A+ +F+ + ++D
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SWN ++  Y+  G      V E   LF+ +R   T  +  T + +     SS   +  
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVME---LFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
              H  A+K    +D FV  +L+N+Y K G + +A+ +FD + ER+ V W  ++  YA  
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--DLGKRHEEQVQAYAIK--------- 287
               E + LF+ + R     D      VL  ++  DL   + +Q+   A+K         
Sbjct: 193 RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDL-VHYGKQIHCLALKNGLLSIASV 251

Query: 288 ----LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               + +Y               + + + + W+  ++GY Q GD+H A+  F NM  +  
Sbjct: 252 GNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           +    TF+  + A +    L  G+QIHG +LK+G+   +        + +K G +   R 
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARK 371

Query: 389 D-------------------------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                                     + T+ASVLRA SSL   L   KQIH   IK    
Sbjct: 372 GFDYLKEPDIVLWTSCRMQMERIMPHELTMASVLRACSSLA-ALEQGKQIHAQTIKYGFS 430

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            +  + +AL  +Y + GS+ +   +F      D+ TWNAMI G   +    KALELF  +
Sbjct: 431 LEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEEL 490

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGK 512
                + D +T    + AC  + ++++GK
Sbjct: 491 RHGTTKPDYVTFVNVLSACSHMGLVERGK 519



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 3/244 (1%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L++GK +HA  +++G    + +++ ++++Y KCG++V A+ +F  I   D V+W  +I+G
Sbjct: 26  LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLING 85

Query: 568 CVDNGE--EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
               G       + ++ +MR    +P+  TF+ +  A+S       G Q HA  IK    
Sbjct: 86  YSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNF 145

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D FVG SL++MY K G + DA  +F  +  RNTV W  ++ G A      E  +LF  M
Sbjct: 146 YDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLM 205

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +      D   +  VLSA +   LV    +  H +  K G+       + LV   G+ G 
Sbjct: 206 RREEGAHDKFIYTSVLSALTVPDLVHYG-KQIHCLALKNGLLSIASVGNALVTMYGKCGC 264

Query: 746 TKEA 749
             +A
Sbjct: 265 LDDA 268



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 2/124 (1%)

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M L  + P   +F  L+   +    L++G+ IHA L++    S  ++  SLV++YAKCG+
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET--LKLFEDMKAHGVEPDSVTFIGVL 701
           I  A ++F+ +  ++ V WN ++ G +Q G    +  ++LF+ M+A    P+  TF GV 
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 702 SACS 705
           +A S
Sbjct: 121 TAAS 124


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 231/739 (31%), Positives = 354/739 (47%), Gaps = 101/739 (13%)

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NV 328
           +SDLG  +      YA  + L     +V L+N  + G+      H ++  F ++ +S ++
Sbjct: 62  LSDLGAIY------YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDL 115

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-------- 380
           + +S T+  A++A +G  +   G+ IHG  +  G  S +++G++++ MY K         
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175

Query: 381 --------------GCVCGLRT----------------------DQFTLASVLRASSSLP 404
                           + G R                       D  TL  +L A + L 
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           E L L  QIH  A K    +  +V T  I +Y + G +     LF      D+  +NAMI
Sbjct: 236 E-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  +  +  +L LF  +  SG RL   T+ + V   G L+++     +H Y +KS F 
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFL 351

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
               VS+ +  +Y K   +  A+ +F++ P     +W  MISG   NG  + A+S++ +M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           + S   P+  T   ++ A + L AL  G+ +H  +   D  S  +V  +L+ MYAKCG+I
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            +A  LF  M  +N V WN M+ G   HG G+E L +F +M   G+ P  VTF+ VL AC
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV E  E F+ M  +YG EP V+HY+ +VD LGRAG  + A + I +M  E  +S+
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
              LLGACR+  DT   + V+EKL  L+P +   +VLLSNI +A   +    + R   K+
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651

Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           + + K P                          I+ K+E L  +++E GY P+T+  L D
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHD 711

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-------------------- 901
           VEEEE+E  +  HSE+LA A+GLI+T P + I   K                        
Sbjct: 712 VEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIV 771

Query: 902 ---ANRFHHLRDGMCPCAD 917
              ANRFHH +DG+C C D
Sbjct: 772 VRDANRFHHFKDGVCSCGD 790



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 148/625 (23%), Positives = 261/625 (41%), Gaps = 90/625 (14%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S + +    + + S S L     THA+I+      D  L   L    S  G++ YAR +F
Sbjct: 19  SKNTYLDFFKRSTSISHL---AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
             +   D+  +N ++  ++ +     E+      +F  LR+S       +      +  +
Sbjct: 76  LSVQRPDVFLFNVLMRGFSVN-----ESPHSSLSVFAHLRKSTDLKPNSSTYAF-AISAA 129

Query: 172 SGYV--WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           SG+    A   +HG A+  G   +  +   +V +Y KF ++ +A+ +FD M E+D +LW 
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189

Query: 230 VMLRAYAENGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
            M+  Y +N    E   +F DL + S    D  ++  +L  +++L + R   Q+ + A K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249

Query: 288 LLLYNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIEC 319
              Y+++                             ++V +N  + GY   G+   ++  
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  ++ S  +  S T LV+L  V+G  +L L   IHG  LKS F S   V  +L  +YSK
Sbjct: 310 FKELMLSGARLRSST-LVSLVPVSG--HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSK 366

Query: 380 MGCV---------------------------CGLRTDQFTLASVLRASSSLPE------- 405
           +  +                            GL  D  +L   ++ S   P        
Sbjct: 367 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426

Query: 406 --------GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                    L L K +H      D  +  +VSTALI +Y + GS+AEA  LF+     + 
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HA 516
            TWN MI GY L     +AL +F  M  SG     +T    + AC    ++K+G ++ ++
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
              + GFE  +   + ++D+  + G +  A      +   P    W T++  C  + + +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 606

Query: 576 LALSIYHQMRLSGVVPDEFTFAILV 600
           LA ++    +L  + PD   + +L+
Sbjct: 607 LARTV--SEKLFELDPDNVGYHVLL 629



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 162/388 (41%), Gaps = 52/388 (13%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHA---------------RILNSSQIPD---- 87
           FS + S     S+  H   ++DL    ST+A               R+++   + D    
Sbjct: 93  FSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152

Query: 88  -RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
              L +N++ MY +   +  AR++FD+MP++D I WN++++ Y  +     E   E  ++
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN-----EMYVESIQV 207

Query: 147 FRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           FR L  ES T     TL  +L        +     +H  A K G    ++V    +++YS
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG---------- 255
           K GKI+    LF   ++ D+V +  M+  Y  NG  E    LF +L  SG          
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327

Query: 256 LCPDDESVQCVLGVISDLGK----RHEEQVQAY------------AIKLLLYNNNSNVVL 299
           L P    +  +  +     K     H     A             A KL   +   ++  
Sbjct: 328 LVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  +SGY Q G    AI  F  M +S    + VT    L+A A    L+LG+ +H    
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLR 387
            + F S++ V  +LI MY+K G +   R
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEAR 475



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 9/210 (4%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T   L   ++SL   +QKS FS +  +     IL        L LGK  H  + ++    
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTIT--CILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
             +++  L+ MY++CGS+  ARRLFD M  ++ ++WN++++ Y   G+G      E   +
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ-----EALNI 508

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-KIGLVWDEFVSGALVNIYS 205
           F  +  S    + +T   +L  C  +G V   + +    + + G          +V+I  
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568

Query: 206 KFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           + G ++ A    + M  E    +W+ +L A
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGA 598


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 243/837 (29%), Positives = 386/837 (46%), Gaps = 152/837 (18%)

Query: 166 LKLCLS--SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
           L+LCL      +  +  VHG  +  G      +   L+++Y K  ++  A+ LFD + E 
Sbjct: 19  LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           D +    M+  Y  +G         + L RS       S++                   
Sbjct: 79  DKIARTTMVSGYCASGD--------IALARSVFEETPVSMR------------------- 111

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       + V++N  ++G+    D + AI  F  M     + D  T+   LA +A
Sbjct: 112 ------------DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLA 159

Query: 344 -GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
              D+     Q H   LKSG      V N+L+++YS+                     +S
Sbjct: 160 LVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSR--------------------CAS 199

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD-GFDLATWN 461
            P  LH ++++      +    D    T ++  Y +NG     + L +  D    L  +N
Sbjct: 200 SPSLLHSARKV----FDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYN 255

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI GY+      +ALE+   M +SG  LDE T  + ++AC    +L+ GKQ+HAY ++ 
Sbjct: 256 AMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR 315

Query: 522 ---GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT--------------- 563
               F  D    + ++ +Y KCG   +A++IF  +PA D V+W                 
Sbjct: 316 EDFSFHFD----NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371

Query: 564 ----------------MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
                           MISG  +NG  +  L ++  M+  G  P ++ F+  +K+ + L 
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A   G+Q HA L+K+   S    G +L+ MYAKCG +E+A  +F+ M   ++V WNA++ 
Sbjct: 432 AYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIA 491

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
            L QHG+G E + ++E+M   G+ PD +TF+ VL+ACS+ GLV +  + F+ M   Y I 
Sbjct: 492 ALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIP 551

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P  +HY+ L+D L R+G+  EA  +I S+PF+ +A +  ALL  CRV G+ E G   A+K
Sbjct: 552 PGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----------------- 830
           L  L P     Y+LLSN++AA  QW++V   R  M+ + VKK+                 
Sbjct: 612 LFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671

Query: 831 ------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE-EKERALYYHSEKLARAYG 883
                  A+ ++  ++ L K ++  GYVPDT FVL DVE +  KE  L  HSEK+A A+G
Sbjct: 672 DDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731

Query: 884 LISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           L+  PP + I                     +  ++ +  +  RFHH R+G C C +
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGN 788



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 180/724 (24%), Positives = 309/724 (42%), Gaps = 125/724 (17%)

Query: 64  ISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           +  + L L ++ H  I+     P   + N L+ +Y +   L YAR+LFD++ + D I+  
Sbjct: 25  LRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIART 84

Query: 124 SILAAYAHSGE-GNAENVTEGFRLFRSLRESITFTSRLT--------LAPLLKLC----- 169
           ++++ Y  SG+   A +V E   +  S+R+++ + + +T         + +   C     
Sbjct: 85  TMVSGYCASGDIALARSVFEETPV--SMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142

Query: 170 --LSSGYVWAS---------------ETVHGYALKIGLVWDEFVSGALVNIYSKFGK--- 209
                 + +AS                  H  ALK G  +   VS ALV++YS+      
Sbjct: 143 GFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202

Query: 210 -IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            +  A+ +FD + E+D   W  M+  Y +NG                         C   
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNG-------------------------CF-- 235

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
              DLGK            L   + N  +V +N  +SGY+  G    A+E    M+ S +
Sbjct: 236 ---DLGKE----------LLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGI 282

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           + D  T+   + A A    L LG+Q+H   L+   +S     NSL+ +Y K G       
Sbjct: 283 ELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS-FHFDNSLVTLYYKCG------- 334

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEY 447
            +F  A                      AI     A   VS  AL+  Y  +G + EA+ 
Sbjct: 335 -KFNEA---------------------RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+     ++ +W  MI G   +    + L+LFS M   G    +   + A+K+C  L  
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
              G+Q HA  +K GF+  L   + ++ MY KCG + +AQ +F  +P  D V+W  +I+ 
Sbjct: 433 YCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAA 492

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL---IKLDC 624
              +G    A+ +Y +M   G+ PD  TF  ++ A S    ++QGR+   ++    ++  
Sbjct: 493 LGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPP 552

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFE 683
            +D +    L+D+  + G   +A  + + +  + T  +W A+L G   HGN E  L +  
Sbjct: 553 GADHYA--RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME--LGIIA 608

Query: 684 DMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMREK--------YGIEPEVEHYS 734
             K  G+ P+   T++ + +  + TG   E      LMR++          IE E + ++
Sbjct: 609 ADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHT 668

Query: 735 FLVD 738
           FLVD
Sbjct: 669 FLVD 672



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 27/243 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   +   L LGK  HA +L        F  N+L+T+Y +CG    AR +F+KMP +
Sbjct: 291 SVIRACANARLLQLGKQVHAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAK 349

Query: 118 DLISWNSILAAYAHSGE------------------------GNAEN--VTEGFRLFRSLR 151
           DL+SWN++L+ Y  SG                         G AEN    EG +LF  ++
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                      +  +K C   G     +  H   +KIG         AL+ +Y+K G + 
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVE 469

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +F  M   D V W  ++ A  ++G G E   ++ ++ + G+ PD  +   VL   S
Sbjct: 470 EAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACS 529

Query: 272 DLG 274
             G
Sbjct: 530 HAG 532


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 220/669 (32%), Positives = 338/669 (50%), Gaps = 78/669 (11%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA-AVAGTDNLNLGQQIHGT 357
           +W   +SG  + G     +  F  M+       +   L A+    AG  ++  G+++HG 
Sbjct: 78  VWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGW 137

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            L++G +  V++ N++++MY+K G        QF  A   R   ++ E            
Sbjct: 138 MLRNGVHLDVVLCNAVLDMYAKCG--------QFERAR--RVFGAMAE------------ 175

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
              D V+ +    A I    ++G +  +  LF+     D  +WN +I G + S ++  AL
Sbjct: 176 --RDAVSWNIAIGACI----QSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
                M  +G   +  T +TA    G LL+   G+Q+H   + +  E D  V S ++DMY
Sbjct: 230 SHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMY 289

Query: 538 VKCGAMVDAQSIFNDI-PAPDDV--AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            KCG +  A S+F+   P   D+  AW+TM++G V NG E+ AL ++ +M   GV  D F
Sbjct: 290 CKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRF 349

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T   +  A + +  +EQGRQ+H  + KL    D  +  ++VDMYAKCGN+EDA  +F + 
Sbjct: 350 TLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA 409

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             +N  +W +ML   A HG G   ++LFE M A  + P+ +T +GVLSACS+ GLVSE  
Sbjct: 410 CTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGE 469

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             F  M+E+YGI P +EHY+ +VD  GR+G   +A   I        A + + LL ACR+
Sbjct: 470 LYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRL 529

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADL 834
               E  K  +EKL+ LE  D+ +YV+LSNI+A  N+W D    R  M+ + V+K P   
Sbjct: 530 HQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRS 589

Query: 835 -----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                  I+A +E L++R+KE GY   TD V+ DVE+E++E AL
Sbjct: 590 WIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETAL 649

Query: 872 YYHSEKLARAYGLISTPPSS---------------------VILSNKEPLYAN--RFHHL 908
            +HSEKLA A+G+ISTP  +                      + + +E +  +  RFHH 
Sbjct: 650 KFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHF 709

Query: 909 RDGMCPCAD 917
           +D  C C D
Sbjct: 710 KDASCSCED 718



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 230/499 (46%), Gaps = 33/499 (6%)

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-L 256
            +++  + +  +  +A+ +FD    R   +W + +   A  G   +    F ++   G  
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 257 CPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
            P+   +  V+   + +G     ++V  +   +L    + +VVL N  L  Y + G    
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGW---MLRNGVHLDVVLCNAVLDMYAKCGQFER 165

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGT----------DNLNLGQQIHGTTLKSGFYS 365
           A   F  M     + D+V++ +A+ A   +          D   L       T+ SG   
Sbjct: 166 ARRVFGAM----AERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMR 221

Query: 366 AVIVGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
           +    ++L  +   ++ G V    T  ++ A VL     LP+   L +Q+H   +     
Sbjct: 222 SGHAADALSHLRRMAQAGVVFNHYT--YSTAFVLAGMLLLPD---LGRQLHGRVLIAALE 276

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGF--DLA-TWNAMIFGYILSNNSHKALELF 480
            D+FV ++L+D+YC+ G +  A  +F++      D+   W+ M+ GY+ +    +AL+LF
Sbjct: 277 GDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLF 336

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M   G   D  T+ +   AC  + M++QG+Q+H    K  ++LD  ++S I+DMY KC
Sbjct: 337 RRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKC 396

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G + DA+SIF+     +   WT+M+     +G+  +A+ ++ +M    + P+E T   ++
Sbjct: 397 GNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVL 456

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRN 658
            A S +  + +G +++   ++ +    P +     +VD+Y + G ++ A    ++ ++ +
Sbjct: 457 SACSHVGLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINH 515

Query: 659 -TVLWNAMLVGLAQHGNGE 676
             ++W  +L     H + E
Sbjct: 516 EAIVWKTLLSACRLHQHNE 534



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 126/561 (22%), Positives = 224/561 (39%), Gaps = 106/561 (18%)

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           H  S + LL G++     L +          +++  + R      AR +FD+ P R    
Sbjct: 19  HPFSAALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPV 78

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           W   ++  A  G        +G R F   L E     +   LA +++ C   G V + + 
Sbjct: 79  WTLTISGCARRG-----RYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKR 133

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           VHG+ L+ G+  D  +  A++++Y+K G+   A+ +F  M ERD V W + + A  ++G 
Sbjct: 134 VHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGD 193

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
                 LF           DES                           L +  S    W
Sbjct: 194 ILGSMQLF-----------DESP--------------------------LRDTTS----W 212

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  +SG ++ G    A+     M ++ V ++  T+  A          +LG+Q+HG  L 
Sbjct: 213 NTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLI 272

Query: 361 SGFYSAVIVGNSLINMYSKMGCV------------------------------------- 383
           +       V +SL++MY K G +                                     
Sbjct: 273 AALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEA 332

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G+  D+FTL SV  A +++   +   +Q+H    K     D+ +++A++D
Sbjct: 333 LDLFRRMLREGVAADRFTLTSVAAACANVGM-VEQGRQVHGCVEKLWYKLDAPLASAIVD 391

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G++ +A  +F+     ++A W +M+  Y        A+ELF  M       +EIT
Sbjct: 392 MYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEIT 451

Query: 495 IATAVKACGCLLMLKQG----KQMH-AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +   + AC  + ++ +G    KQM   Y +    E   C    I+D+Y + G +  A++ 
Sbjct: 452 LVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNC----IVDLYGRSGLLDKAKNF 507

Query: 550 F--NDIPAPDDVAWTTMISGC 568
              N+I   + + W T++S C
Sbjct: 508 IEENNIN-HEAIVWKTLLSAC 527



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 156/388 (40%), Gaps = 69/388 (17%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +++R      D+  GK  H  +L +    D  L N ++ MY++CG    ARR+F  M +R
Sbjct: 117 AVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAER 176

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLF--RSLRESITFTSRLT-----------LAP 164
           D +SWN  + A   SG     ++    +LF    LR++ ++ + ++           L+ 
Sbjct: 177 DAVSWNIAIGACIQSG-----DILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSH 231

Query: 165 LLKLC----------LSSGYVWA--------SETVHGYALKIGLVWDEFVSGALVNIYSK 206
           L ++            S+ +V A           +HG  L   L  D FV  +L+++Y K
Sbjct: 232 LRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCK 291

Query: 207 FGKIREAKFLFDGMQE--RDV-VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
            G +  A  +FD      RD+   W  M+  Y +NG  EE   LF  + R G+  D  ++
Sbjct: 292 CGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTL 351

Query: 264 QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS---------------------------- 295
             V    +++G   + +     ++ L Y  ++                            
Sbjct: 352 TSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACT 411

Query: 296 -NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            N+ +W   L  Y   G    AIE F  M    +  + +T +  L+A +    ++ G+  
Sbjct: 412 KNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELY 471

Query: 355 HGTTLKS-GFYSAVIVGNSLINMYSKMG 381
                +  G   ++   N ++++Y + G
Sbjct: 472 FKQMQEEYGIVPSIEHYNCIVDLYGRSG 499



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 5/191 (2%)

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-V 589
           + +L  +V+     DA+ +F++ P      WT  ISGC   G     +  + +M   G  
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+ F  A +V+  + +  +E G+++H  +++     D  +  +++DMYAKCG  E A  
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F  M  R+ V WN  +    Q G+   +++LF++        D+ ++  ++S    +G 
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLR----DTTSWNTIISGLMRSGH 224

Query: 710 VSEAYENFHLM 720
            ++A  +   M
Sbjct: 225 AADALSHLRRM 235


>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 271/942 (28%), Positives = 435/942 (46%), Gaps = 116/942 (12%)

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDR------FLTNNLMTMYSRCGSLVYARRLFDKMP 115
           H + +  LL  +S H        IP         L N  + MY   G++  AR+LFD+MP
Sbjct: 19  HNLHSQTLLQLQSNHIAQTKLKPIPQNEIHARTRLFNLYLRMYVNAGAMQEARKLFDEMP 78

Query: 116 DRDLISWNSILAAYAHSGEGNAENVT-------EGFRLFRSLRESITFTSRLTLAPLLKL 168
           +R L+SW  +++ YA  G  +   +         G  L R   +S  F   L    +++ 
Sbjct: 79  ERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP--DSFVFAVVLRACGMVE- 135

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           CLS G       VHG  +K   V D FV  ALV++Y   G + +A  +F G+ + D+V W
Sbjct: 136 CLSYG-----RGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGW 190

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK 287
             +L  Y +NG  EE   +F D+   G+ PD  +   VLG  ++L       Q   Y IK
Sbjct: 191 SSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIK 250

Query: 288 L----LLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIEC 319
           +     LY  NS                        N+V WN  ++GY+       A+  
Sbjct: 251 MGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRI 310

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  ++    Q D  + L  L AV+G  +L+ G++IHG  L++G  +   V +SL++MY  
Sbjct: 311 FQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMY-- 368

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           +GC+     D  +L   +     L   L                 D F+ T+L+      
Sbjct: 369 IGCI-----DHESLYPRVEVPLKLLNYLEGGGY------------DEFIMTSLLKWCSLE 411

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
            S+  A+ +F   +  D A W+A+I G+  +    +AL+LF  M   G + +E T  + +
Sbjct: 412 SSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVI 471

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
            AC  L  L++GK++H   ++SG+E +  V + ++++Y +      A  + + IP   ++
Sbjct: 472 LACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIP-DSEI 530

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +W  +I  C+   + ++   +  ++++S    D  +   +  + S    L  G Q HA +
Sbjct: 531 SWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYM 590

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            K    S P +  SL+ MY+ CG  ++A   F  M  ++T  W ++L    +HG+  E L
Sbjct: 591 TKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEAL 650

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            L   M+      D  TF  VL+AC+  GLV EA+  F  M+E YGIEP  EHYS +V+ 
Sbjct: 651 NLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEV 710

Query: 740 LGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
           LGRAG  +E  + I  +P F+    + R LL + R+ G+ +  ++ AEKL+ LEP D SA
Sbjct: 711 LGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSA 770

Query: 799 YVLLSNIFAAANQWDDVTSARGEMK-----------RKNV-----KKDPADLIFAKVEGL 842
            +LL  +     +WD+    + + K           R  +      ++PA  + AK+  +
Sbjct: 771 NLLLEQVLLTLGEWDNALKLKTKTKSMRASSSWIEIRNRIYEFASDENPAKEVSAKLAEI 830

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI------ 893
             +++E GYV D + +L + EEEE +    +H+E  A A+GLIS P   P  V+      
Sbjct: 831 EGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLISLPHGMPVRVVKNVRMC 890

Query: 894 -----------------LSNKEPLYANRFHHLRDGMCPCADN 918
                            L  K+P     FHH RDG C C D 
Sbjct: 891 GDCHSACKFMSTFLERELVVKDPY---SFHHFRDGKCSCRDT 929



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/581 (23%), Positives = 256/581 (44%), Gaps = 44/581 (7%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR       L  G+  H  ++  S + D F+ N L++MY  CG+L  A  +F  +   D
Sbjct: 127 VLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPD 186

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+ W+SIL+ Y  +G        EG R+F  +            + +L  C ++   W  
Sbjct: 187 LVGWSSILSGYVKNGLEE-----EGLRIFCDMVSGGIEPDAFAFSMVLGAC-TNLECWDF 240

Query: 179 ET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            T  H Y +K+G     ++  +L++ Y+K G +   + +F  M E+++V W   +  Y  
Sbjct: 241 GTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVH 300

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSN 296
           N    E   +F  L       DD S+  +L  +S LG   H +++  Y ++  +  N   
Sbjct: 301 NFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYV 360

Query: 297 VVLWNKKLSGYLQVGDN---HGAIECFVNMIR--SNVQYDSVTFLVALAAVAGTDNLNLG 351
           V   +  L  Y+   D+   +  +E  + ++       YD       L   +   +L   
Sbjct: 361 V---SSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETA 417

Query: 352 QQIHGTTLK--SGFYSAVIVGNSL-------INMYSKMGCVCGLRTDQFTLASVLRASSS 402
           +++     +  +  +SA+I G+S        + ++ KM    G++ ++FT  SV+ A  +
Sbjct: 418 KRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQ-FDGIKANEFTFTSVILACLA 476

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA---- 458
           L E L   K++H   +++   ++  V   LI++Y           L+++K    L     
Sbjct: 477 L-ENLRKGKELHCKILRSGYESNFSVVNTLINLYSE---------LWQHKQALKLCSMIP 526

Query: 459 ----TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
               +WN +I   + + +     +L   +  S   LD ++      +C   ++L  G Q 
Sbjct: 527 DSEISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQA 586

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           HAY  K G      +S+ ++ MY  CG   +A   FN +P  D  +WT+++S  V++G  
Sbjct: 587 HAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHP 646

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
             AL++  QMR      D+ TF  ++ A + +  +++  ++
Sbjct: 647 SEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRL 687



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 7/237 (2%)

Query: 39  LPFLQKSHFSSSSSSSQWF-SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           L   +K  F    ++   F S++   ++  +L  GK  H +IL S    +  + N L+ +
Sbjct: 449 LKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINL 508

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           YS       A +L   +PD + ISWN ++ A        AE+     +L   ++ S    
Sbjct: 509 YSELWQHKQALKLCSMIPDSE-ISWNFLIRACL-----GAEDYEIIHKLLWRIQVSHGNL 562

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
             ++   +   C S   +      H Y  K GL+    +S +L+ +YS  GK  EA   F
Sbjct: 563 DPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAF 622

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           + M E+D   W  +L A  E+G   E  +L   +       D  + + VL   + +G
Sbjct: 623 NLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMG 679


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 261/878 (29%), Positives = 417/878 (47%), Gaps = 95/878 (10%)

Query: 12  RHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLL 71
           R K   V+  +     Y     FSLSL  F +     ++ +S  + SIL    + S L  
Sbjct: 70  RMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQ 129

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR-RLFDKMPDRDLISWNSILAAYA 130
           G+  HA ++ SS      + N+L+ MYSRC S   +R + F +M  RD++SW  ++ AY+
Sbjct: 130 GRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYS 189

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G+      +   +LFR +    T  + +T   +L  C +   +     +H   ++  L
Sbjct: 190 QDGK-----FSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 244

Query: 191 V--WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
               D  V    +N+Y K G +  A   F  M+ RDVV W VM+ AY+++G       LF
Sbjct: 245 ESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLF 304

Query: 249 VDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
            ++   G  P+  +   +L G  +        Q+ A  ++  L    S+VV+ N  L  Y
Sbjct: 305 REMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL---ESHVVVANSLLGMY 361

Query: 308 ---------------LQVGDN-----------------HGAIECFVNMIRSNVQYDSVTF 335
                          + V D+                   A+  + +M+   V   ++  
Sbjct: 362 SRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLAL 421

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------- 384
            + L A      L  G+ +H   ++SG     +VG SL+NMY+K G V            
Sbjct: 422 SMVLEACGSLAELKGGKLVHAHVIESGL-EGDLVGISLVNMYAKCGTVGEARKVFDRINN 480

Query: 385 -------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                                          G+  D+ T  +VL A  +  + L   + I
Sbjct: 481 RSRILWNSMITAYQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAAD-LENGRTI 539

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H   + +   AD  V+TAL ++Y + GS+ EA  +F++    D+ +WN MI  Y+   + 
Sbjct: 540 HTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDG 599

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             A+ L   M   G R D+ T  + + AC     L  G+Q+H++  +S  E D+ + +G+
Sbjct: 600 EGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGL 659

Query: 534 LDMYVKCGAMVDAQSIFNDIPA------PDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
           + MY  CG++ +A+ IF++I +       D   WT+MI+    +GE   AL +Y QM   
Sbjct: 660 ITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSR 719

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            V  D  TF  ++ A + L+ L QG+ IHA +++   ++D  V  S+V MY KCG+ ++A
Sbjct: 720 QVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEA 779

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
            I+F++   ++  LW A++   A+HG+GE+ L +F  ++  G+E  ++TF+ +LSACS+ 
Sbjct: 780 SIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHV 839

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GL+ E  E F  M E  GIEP +EH+S LVD L RAG    A E +  MP  A+  +  A
Sbjct: 840 GLIEEGCEFFASMAE-LGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTA 898

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           LL ACRV GD E  + VAEKL AL+P   + YV LSNI
Sbjct: 899 LLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 209/799 (26%), Positives = 352/799 (44%), Gaps = 92/799 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK    R+  +    D  + N  + MY +CG L  A + F +M  RD++SW  ++ AY+ 
Sbjct: 29  GKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQ 88

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G+      +   +LFR +    T  + +T   +L  C +   +     +H   ++  L 
Sbjct: 89  DGK-----FSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLE 143

Query: 192 WDEFVSGALVNIYSKFGKIREAKF-LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
               V+ +L+ +YS+     +++   F  M+ RDVV W VM+ AY+++G       LF +
Sbjct: 144 SHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFRE 203

Query: 251 LHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAY------------------------- 284
           +   G  P+  +   +L G  +        Q+ A                          
Sbjct: 204 MLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKC 263

Query: 285 -----AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                A++        +VV W   +  Y Q G    +++ F  M+      +SVTF+  L
Sbjct: 264 GCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSIL 323

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------- 379
           +       L  G+QIH   ++S   S V+V NSL+ MYS+                    
Sbjct: 324 SGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSV 383

Query: 380 ------MGCV-----C-------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                 M C      C             G+      L+ VL A  SL E L   K +H 
Sbjct: 384 SWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAE-LKGGKLVHA 442

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           H I++    D  V  +L+++Y + G++ EA  +F+  +      WN+MI  Y    + H+
Sbjct: 443 HVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPHE 500

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL LF  M   G   D IT  T + AC     L+ G+ +H   + SGF  D+ V++ + +
Sbjct: 501 ALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFN 560

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG++ +A+ +F+ +   D V+W  MI+  V   + + A+S+   M+L G+ PD+ T
Sbjct: 561 MYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKAT 620

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF---- 651
           F  L+ A S    L  GRQIH+ + +    +D  +   L+ MYA CG++ +A  +F    
Sbjct: 621 FTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIF 680

Query: 652 --KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
              +   R+  LW +M+    QHG   + L+L+E M +  VE D VTFI VL+AC++   
Sbjct: 681 SNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSD 740

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           + +  +  H    + G+  +V   + +V   G+ G   EA  ++         S+  AL+
Sbjct: 741 LRQG-QAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEAS-IVFEKTKHKDISLWTALI 798

Query: 770 GACRVQGDTETGKWVAEKL 788
            +    G  E   W+  +L
Sbjct: 799 ASYARHGHGEQALWIFRRL 817



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 179/688 (26%), Positives = 291/688 (42%), Gaps = 83/688 (12%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R+ +  LL  C   G +   + +        L  D  V    +N+Y K G +  A   F 
Sbjct: 10  RVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFA 69

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRH 277
            M+ RDVV W VM+ AY+++G       LF ++   G  P+  +   +L G  +      
Sbjct: 70  RMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQ 129

Query: 278 EEQVQAYAIK-------------LLLYN----------------NNSNVVLWNKKLSGYL 308
             Q+ A  ++             L +Y+                   +VV W   +  Y 
Sbjct: 130 GRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYS 189

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G    +I+ F  M+      +SVTF+  L+       L  G+QIH   ++S   S + 
Sbjct: 190 QDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLD 249

Query: 369 VG--NSLINMYSKMGCVCGL--------RTD----------------------------- 389
           +G  N  INMY K GC+ G         R D                             
Sbjct: 250 IGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLL 309

Query: 390 ------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
                   T  S+L    + P  L   +QIH   +++   +   V+ +L+ +Y R  S  
Sbjct: 310 EGTAPNSVTFVSILSGCEA-PSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWE 368

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSHMHTSGERLDEITIATAVKA 501
           ++  LF+     D  +W+ +I       +SH   AL L+  M   G     + ++  ++A
Sbjct: 369 DSRSLFDRMSVRDSVSWSTIIMA-CSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEA 427

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           CG L  LK GK +HA+ ++SG E DL V   +++MY KCG + +A+ +F+ I     + W
Sbjct: 428 CGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRILW 486

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            +MI+   +    + AL ++ +M+  GV PD  TF  ++ A      LE GR IH  ++ 
Sbjct: 487 NSMITAYQEKDPHE-ALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVD 545

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
              ++D  V  +L +MYAKCG++ +A  +F  M  R+ V WN M+    Q  +GE  + L
Sbjct: 546 SGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISL 605

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
              M+  G+ PD  TF  +L+ACS    + +  +  H    +  +E ++   + L+    
Sbjct: 606 CWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQ-IHSWIAESRLENDIVMVTGLITMYA 664

Query: 742 RAGRTKEAGELILSMPFEASASMHRALL 769
             G    A E I    F  S   HR L 
Sbjct: 665 NCGSLNNARE-IFDNIFSNSRQHHRDLF 691



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 215/458 (46%), Gaps = 34/458 (7%)

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
           + R G+ PD   ++ +L   + LG   E ++     +L       ++ + N  ++ Y++ 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKL--IQDRLAGTQLELDIGVRNLTINMYVKC 58

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G   GA++ F  M R +V    V++ V + A +     +L  Q+        F   ++ G
Sbjct: 59  GCLDGAVQTFARMKRRDV----VSWTVMIGAYSQDGKFSLSLQL--------FREMLLEG 106

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
            +                +  T  S+L    + P  L   +QIH   +++   +   V+ 
Sbjct: 107 TA---------------PNSVTFVSILSGCEA-PSLLEQGRQIHALVVESSLESHVVVAN 150

Query: 431 ALIDVYCRNGSMAEAEY-LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           +L+ +Y R  S  ++    F      D+ +W  MI  Y        +++LF  M   G  
Sbjct: 151 SLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTA 210

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE--LDLCVSSGILDMYVKCGAMVDAQ 547
            + +T  + +  C    +L+QG+Q+HA  ++S  E  LD+ V +  ++MYVKCG +  A 
Sbjct: 211 PNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAV 270

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
             F  +   D V+WT MI     +G+  L+L ++ +M L G  P+  TF  ++      +
Sbjct: 271 QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPS 330

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            LEQGRQIHA +++    S   V  SL+ MY++C + ED+  LF +M +R++V W+ +++
Sbjct: 331 LLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIM 390

Query: 668 GLAQH-GNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             ++   +  + L L+  M   GV P ++    VL AC
Sbjct: 391 ACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEAC 428



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 7/220 (3%)

Query: 1   MYTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL 60
           ++  + +N +  H+  ++  S  T   Y     +  +L  + Q       +    + S+L
Sbjct: 675 IFDNIFSNSRQHHRDLFLWTSMIT--AYEQHGEYRKALELYEQMHSRQVEADRVTFISVL 732

Query: 61  RHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
                 SDL  G++ HAR++      D  + N+++ MY +CGS   A  +F+K   +D+ 
Sbjct: 733 NACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDIS 792

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            W +++A+YA  G G      +   +FR LR+     S LT   +L  C   G +     
Sbjct: 793 LWTALIASYARHGHGE-----QALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCE 847

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
                 ++G+  +      LV++ ++ G +  A+     M
Sbjct: 848 FFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRM 887


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 238/711 (33%), Positives = 342/711 (48%), Gaps = 105/711 (14%)

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA-VAGTDNL 348
           LY  +S  V +N  ++GY   GD H A+E F  M R + + D  TF   L+A V    N 
Sbjct: 107 LYMRDS--VFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNE 164

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
               Q+H   +K+G                 MGCV     +      V RAS     G+ 
Sbjct: 165 QQCGQMHCAVVKTG-----------------MGCVSSSVLNALLSVYVKRASEL---GIS 204

Query: 409 LSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
            S  +    + ++    D    T +I  Y RN  +  A  +FE       A WNAMI GY
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD- 526
           +      +AL L   M   G + D+IT  T + AC  +   + GKQ+HAY +K+    + 
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNH 324

Query: 527 -LCVS---------------------------------SGILDMYVKCGAMVDAQSIFND 552
             C+S                                 + IL  YV  G M +A+S F +
Sbjct: 325 SFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEE 384

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + +  T MISG   NG  D  L ++ QMRL G  P +F FA  + A S L ALE G
Sbjct: 385 MPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENG 444

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           RQ+HA L+ L   S   VG +++ MYAKCG +E A  +F  M   + V WN+M+  L QH
Sbjct: 445 RQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQH 504

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+G + ++LF+ M   GV PD +TF+ VL+ACS+ GLV +    F+ M E YGI P  +H
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDH 564

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD   RAG    A  +I SMP +  A +  ALL  CR+ G+ + G   AE+L  L 
Sbjct: 565 YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------DL- 834
           P +   YVLLSNI+A   +W++V   R  M+ + V+K+PA                 D+ 
Sbjct: 625 PQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVH 684

Query: 835 -----IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
                ++  +E L   +K+ GY+PDT FVL D+E E+KE AL  HSEKLA  +G++  PP
Sbjct: 685 PEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPP 744

Query: 890 SSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            + +                     ++ +E +  +  RFHH ++G C C D
Sbjct: 745 GATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRD 795



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 179/735 (24%), Positives = 302/735 (41%), Gaps = 152/735 (20%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-------------- 116
           L ++ HA ++ S   P     N L+ MY +  +LVYAR+LF+++P+              
Sbjct: 31  LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 117 -------------------RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR------ 151
                              RD + +N+++  YAH+G+G++        LFR++R      
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHS-----ALELFRAMRRDDFRP 145

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVNIYSKFGK- 209
           +  TFTS L+      L L  G       +H   +K G+      V  AL+++Y K    
Sbjct: 146 DDFTFTSVLS-----ALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASE 200

Query: 210 -------IREAKFLFDGMQERDVVLWKVMLRAYAEN---GFGEEVFHLFVDLHRSGLCPD 259
                  +  A+ LFD M +RD + W  M+  Y  N       EVF   V+         
Sbjct: 201 LGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVE--------- 251

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                       +LG                         WN  +SGY+  G    A+  
Sbjct: 252 ------------NLG-----------------------AAWNAMISGYVHCGCFQEALTL 276

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS----AVIVGNSLIN 375
              M    +Q+D +T+   ++A A   +  +G+Q+H   LK+         + V N+LI 
Sbjct: 277 CRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALIT 336

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           +Y K   V   R                       K  +   ++N    ++ +S      
Sbjct: 337 LYCKNNKVDEAR-----------------------KIFYAMPVRNIITWNAILSG----- 368

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y   G M EA+  FE     +L T   MI G   +    + L+LF  M   G    +   
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A A+ AC  L  L+ G+Q+HA  +  G+E  L V + ++ MY KCG +  A+S+F  +P+
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V+W +MI+    +G    A+ ++ QM   GV PD  TF  ++ A S    +E+GR  
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548

Query: 616 HANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQ 671
             ++++   +    D +    +VD++ + G    A I+   M  +    +W A+L G   
Sbjct: 549 FNSMLESYGITPCEDHYA--RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY------- 724
           HGN +  ++  E +     + D  T++ + +  +  G  +E  +   LMR++        
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDG-TYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPAC 665

Query: 725 -GIEPEVEHYSFLVD 738
             IE E + + F+VD
Sbjct: 666 SWIEVENKVHVFMVD 680



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 208/495 (42%), Gaps = 119/495 (24%)

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           + +L + +H   + SGF       N L+ MY K                    SS+L   
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK--------------------SSNLVYA 67

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF--DLATWNAMI 464
             L ++I           D+   T LI  YC  G++     +F     +  D   +NAMI
Sbjct: 68  RQLFEEI--------PNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMI 119

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML----KQGKQMHAYAMK 520
            GY  + + H ALELF  M     R D+ T  + + A   L++     +Q  QMH   +K
Sbjct: 120 TGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA---LVLFVGNEQQCGQMHCAVVK 176

Query: 521 SGFELDLCVSSGILD----MYVK--------CGAMVDAQSIFNDIPAPDDVAWTTM---- 564
           +G     CVSS +L+    +YVK        C AMV A+ +F+++P  D++ WTTM    
Sbjct: 177 TGMG---CVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGY 233

Query: 565 ---------------------------ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
                                      ISG V  G    AL++  +MR  G+  D+ T+ 
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQ 653
            ++ A + + + + G+Q+HA ++K + + +    +S    L+ +Y K   +++A  +F  
Sbjct: 294 TIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353

Query: 654 MDMRNTVLWNA-------------------------------MLVGLAQHGNGEETLKLF 682
           M +RN + WNA                               M+ GLAQ+G G+E LKLF
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           + M+  G EP    F G L+ACS  G + E     H      G E  +   + ++    +
Sbjct: 414 KQMRLDGFEPCDFAFAGALTACSVLGAL-ENGRQLHAQLVHLGYESSLSVGNAMISMYAK 472

Query: 743 AGRTKEAGELILSMP 757
            G  + A  + ++MP
Sbjct: 473 CGVVEAAESVFVTMP 487



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 30/249 (12%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRF----LTNNLMTMYSRCGSLVYARRLF 111
           + +I+    +     +GK  HA IL +   P+      ++N L+T+Y +   +  AR++F
Sbjct: 292 YTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351

Query: 112 DKMPDRDLISWNSILAAYAHSGE------------------------GNAENV--TEGFR 145
             MP R++I+WN+IL+ Y ++G                         G A+N    EG +
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           LF+ +R           A  L  C   G +     +H   + +G      V  A++++Y+
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G +  A+ +F  M   D+V W  M+ A  ++G G +   LF  + + G+ PD  +   
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531

Query: 266 VLGVISDLG 274
           VL   S  G
Sbjct: 532 VLTACSHAG 540


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 255/820 (31%), Positives = 406/820 (49%), Gaps = 77/820 (9%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H  ++      D FL+N+L+  Y++   L  A R+FD+MP R+ +SW  +L+ Y   G  
Sbjct: 83  HVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI- 141

Query: 136 NAENVTEGFRLFRSLRESITFTSR---LTLAPLLKLCLSSG--YVWASETVHGYALKIGL 190
                 E FR+FR++   +    R    T   LL+ C   G   +  +  VHG   K   
Sbjct: 142 ----TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEY 197

Query: 191 VWDEFVSGALVNIYSK--FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
             +  V  AL+++Y     G    A+ +FDG   RD++ W  ++  YA+ G     F LF
Sbjct: 198 ASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLF 257

Query: 249 VDLHRSG----LCPDDESVQCVL-----------------------GVISDL-------- 273
           +D+ R      L P + +   ++                       G  SDL        
Sbjct: 258 MDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVS 317

Query: 274 -GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
              RH    +A  I L L   N+  V  N  + G ++   +  A++ FV   R+ +  ++
Sbjct: 318 AFARHGLIDEAKDIFLSLKEKNA--VTLNGLIVGLVKQHCSEEAVKIFVG-TRNTIVVNA 374

Query: 333 VTFLVALAAVA----GTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSKMGCVCGLR 387
            T++V L+A+A      + L  G++ HG  L++G     + V N L+NMY+K G +    
Sbjct: 375 DTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSAS 434

Query: 388 --------TDQFTLASVLRASSSLPEGLHL---SKQIHVHAIKNDTVADSFVSTALIDVY 436
                   TD+ +  +++ A      GL L    +Q+H  A+K     D+ VS  L+ +Y
Sbjct: 435 KIFQLMEATDRISWNTIISALDQ--NGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMY 492

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS--HKALELFSHMHTSGERLDEIT 494
              G+M++   +F +    D  +WN+M+ G + S+ +   + +E+F++M   G   +++T
Sbjct: 493 GECGAMSDCWKVFNSMADHDEVSWNSMM-GVMASSQAPISETVEVFNNMMRGGLIPNKVT 551

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
               + A   L +L+ GKQ HA  +K G   D  V + ++  Y K G M   + +F+++ 
Sbjct: 552 FVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMS 611

Query: 555 APDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D V+W +MISG + NG    A+     M  SG + D  TF+I++ A + + ALE+G 
Sbjct: 612 GRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGM 671

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           ++HA  I+    SD  V  +LVDMY+KCG ++ A  LF  M  RN   WN+M+ G A+HG
Sbjct: 672 EMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHG 731

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
            G + L+ FE+M      PD VTF+ VLSACS+ GLV    E F +M + +GI P++EHY
Sbjct: 732 LGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHY 790

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD---TETGKWVAEKLMA 790
           S ++D LGRAG+  +  E I  MP + +A + R +L ACR   D    E G+     L+ 
Sbjct: 791 SCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLE 850

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           +EP +   YVL SN  AA   W+D   AR  M++  VKK+
Sbjct: 851 IEPQNPVNYVLASNFHAATGMWEDTAKARAGMRQATVKKE 890



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 171/671 (25%), Positives = 282/671 (42%), Gaps = 127/671 (18%)

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           + E +H   +K GL  D F+S  LVN Y+K  ++  A  +FD M +R+ V W  +L  Y 
Sbjct: 78  SPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYV 137

Query: 237 ENGFGEEVFHLFVDLHRS---GLCPDDESVQCVLGVISDLGKRH---EEQVQAYAIKLLL 290
             G  EE F +F  + R    G  P   +   +L    D G        QV     K   
Sbjct: 138 LQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEY 197

Query: 291 YNNNS------------------------------NVVLWNKKLSGYLQVGDNHGAIECF 320
            +N +                              +++ WN  +S Y + GD       F
Sbjct: 198 ASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLF 257

Query: 321 VNMIR--SNVQYDSV--TF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
           ++M R  S +Q      TF  L+   +++   +  L  Q+  + LKSG  S + VG++L+
Sbjct: 258 MDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVL-DQVFVSVLKSGCSSDLYVGSALV 316

Query: 375 NMYSKMGCV--------------------------------------CGLRT------DQ 390
           + +++ G +                                       G R       D 
Sbjct: 317 SAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADT 376

Query: 391 FTLASVLRASSSLP-EGLHLSKQIHVHAIKND-TVADSFVSTALIDVYCRNGSMAEAEYL 448
           + +     A  S+P EGL   K+ H H ++   T     VS  L+++Y + G++  A  +
Sbjct: 377 YVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+  +  D  +WN                                TI +A+   G L +L
Sbjct: 437 FQLMEATDRISWN--------------------------------TIISALDQNG-LKLL 463

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G+Q+H  A+K G +LD  VS+ ++ MY +CGAM D   +FN +   D+V+W +M+ G 
Sbjct: 464 SAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMM-GV 522

Query: 569 VDNGEEDLA--LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           + + +  ++  + +++ M   G++P++ TF  L+ A S L+ LE G+Q HA ++K     
Sbjct: 523 MASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMD 582

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMD-MRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           D  V  +L+  YAK G++     LF  M   R+ V WN+M+ G   +G  +E +     M
Sbjct: 583 DNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLM 642

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G   D  TF  +L+AC+    +    E  H    +  +E +V   S LVD   + GR
Sbjct: 643 LHSGQIMDCCTFSIILNACASVAALERGME-MHAFGIRSHLESDVVVESALVDMYSKCGR 701

Query: 746 TKEAGELILSM 756
              A +L  SM
Sbjct: 702 VDYASKLFNSM 712



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 129/544 (23%), Positives = 217/544 (39%), Gaps = 130/544 (23%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +I  ++I    L  GK  H  +L +     +  ++N L+ MY++CG++  A ++F  M  
Sbjct: 383 AIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEA 442

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            D ISWN+I++A   +G                                LKL LS+G   
Sbjct: 443 TDRISWNTIISALDQNG--------------------------------LKL-LSAG--- 466

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + VH  A+K GL  D  VS  LV +Y + G + +   +F+ M + D V W  M+   A
Sbjct: 467 --QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMA 524

Query: 237 ENGFG-EEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI---- 286
            +     E   +F ++ R GL P+  +   +L  +S     +LGK+    V  + +    
Sbjct: 525 SSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDN 584

Query: 287 ----KLL--------------LYNNNS---NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                L+              L++N S   + V WN  +SGY+  G    A++C   M+ 
Sbjct: 585 VVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLH 644

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S    D  TF + L A A    L  G ++H   ++S   S V+V ++L++MYSK    CG
Sbjct: 645 SGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSK----CG 700

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R D                  + SK  +    +N+     F   ++I  Y R+G     
Sbjct: 701 -RVD------------------YASKLFNSMTQRNE-----FSWNSMISGYARHGL---- 732

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
                                        KALE F  M  S E  D +T  + + AC   
Sbjct: 733 ---------------------------GRKALETFEEMLRSRESPDHVTFVSVLSACSHA 765

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTM 564
            ++++G +        G    +   S ++D+  + G +   +     +P  P+ + W T+
Sbjct: 766 GLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTV 825

Query: 565 ISGC 568
           +  C
Sbjct: 826 LVAC 829



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 17/295 (5%)

Query: 505 LLMLKQG------KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           LL+ ++G      + +H   +K G   DL +S+ +++ Y K   +  A  +F+++P  + 
Sbjct: 67  LLLRRRGDAANSPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNA 126

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLS---GVVPDEFTFAILVKA--SSCLTALEQGR 613
           V+WT ++SG V  G  + A  ++  M      G  P  FTF  L++A        L    
Sbjct: 127 VSWTCLLSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFAT 186

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKC--GNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           Q+H  L K + +S+  V  +L+ MY  C  G    A  +F    +R+ + WNA++   A+
Sbjct: 187 QVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAK 246

Query: 672 HGNGEETLKLFEDMKAHG----VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
            G+   T  LF DM+       + P   TF  +++A S +   S   +   +   K G  
Sbjct: 247 KGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCS 306

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            ++   S LV A  R G   EA ++ LS+  + + +++  ++G  +     E  K
Sbjct: 307 SDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVK 361



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 7/190 (3%)

Query: 57  FSILRHAI-STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FSI+ +A  S + L  G   HA  + S    D  + + L+ MYS+CG + YA +LF+ M 
Sbjct: 654 FSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT 713

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R+  SWNS+++ YA  G G      E F      RES      +T   +L  C  +G V
Sbjct: 714 QRNEFSWNSMISGYARHGLG--RKALETFEEMLRSRES---PDHVTFVSVLSACSHAGLV 768

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
                        G++        ++++  + GKI + K     M  + + ++W+ +L A
Sbjct: 769 ERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVA 828

Query: 235 YAENGFGEEV 244
             ++  G ++
Sbjct: 829 CRQSKDGSKI 838


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 213/716 (29%), Positives = 353/716 (49%), Gaps = 97/716 (13%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N  V LWN  +S Y ++G+   ++  F  M +  V  +  TF   L   A    +   ++
Sbjct: 157 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 216

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CVC--- 384
           +HG  LK GF S   V NSLI  Y K G                          CV    
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276

Query: 385 --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G+  D  TL SVL A +++   L L + +H   +K     +   S 
Sbjct: 277 SGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGN-LSLGRALHGFGVKACFSEEVVFSN 335

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            L+D+Y + G++  A  +F       + +W ++I  Y+       A+ LF  M + G R 
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D  T+ + V AC C   L +G+ +H+Y +K+G   +L V++ +++MY KCG++ +A+ +F
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + IP  D V+W TMI G   N   + AL ++  M+     PD+ T A ++ A + L AL+
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALD 514

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +GR+IH ++++    SD  V  +LVDMYAKCG +  A +LF  +  ++ + W  M+ G  
Sbjct: 515 KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 574

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG G E +  F +M+  G+EPD  +F  +L+ACS++GL++E ++ F+ MR + G+EP++
Sbjct: 575 MHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKL 634

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +VD L R G   +A + I SMP +   ++   LL  CR+  D +  + VAE +  
Sbjct: 635 EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE 694

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           LEP ++  YV+L+N++A A +W++V   R  M+++  K++P                   
Sbjct: 695 LEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNS 754

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                   D++ +K   L  +++   Y     +VL++ ++ EKE     HSEK A A+G+
Sbjct: 755 KHPQAKKIDVLLSK---LTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGI 811

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           ++ PP   +  +K                           +NRFHH +DG+C C D
Sbjct: 812 LNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 265/612 (43%), Gaps = 89/612 (14%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + + S+L+       L  GK  H+ I+++    D  L   L+ MY  CG LV  R++FDK
Sbjct: 95  NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           + +  +  WN +++ YA  G     N  E   LF+ +++     +  T   +LK   + G
Sbjct: 155 IMNDKVFLWNLLMSEYAKIG-----NFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 209

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            V   + VHGY LK+G   +  V  +L+  Y KFG +  A  LFD + E DVV W  M+ 
Sbjct: 210 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMIN 269

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK------RHEEQVQAYAIK 287
               NGF      +F+ +   G+  D  ++  VL   +++G        H   V+A   +
Sbjct: 270 GCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSE 329

Query: 288 LLLYNN-----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            ++++N                       ++ +V W   ++ Y++ G    AI  F  M 
Sbjct: 330 EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQ 389

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
              V+ D  T    + A A + +L+ G+ +H   +K+G  S + V N+LINMY+K G V 
Sbjct: 390 SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVE 449

Query: 385 GLR------------------------------------------TDQFTLASVLRASSS 402
             R                                           D  T+A VL A + 
Sbjct: 450 EARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAG 509

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L   ++IH H ++    +D  V+ AL+D+Y + G +  A+ LF+     DL +W  
Sbjct: 510 LA-ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 568

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKS 521
           MI GY +    ++A+  F+ M  +G   DE + +  + AC    +L +G K  ++   + 
Sbjct: 569 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNEC 628

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
           G E  L   + ++D+  + G +  A      +P  PD   W  ++SGC           I
Sbjct: 629 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC----------RI 678

Query: 581 YHQMRLSGVVPD 592
           +H ++L+  V +
Sbjct: 679 HHDVKLAEKVAE 690



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 126/249 (50%), Gaps = 1/249 (0%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L+ GK++H+  + +G  +D  + + ++ MYV CG +V  + IF+ I       W  ++S 
Sbjct: 110 LEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 169

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G    ++S++ +M+  GVV + +TF  ++K  + L  +++ +++H  ++KL   S+
Sbjct: 170 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSN 229

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             V  SL+  Y K G +E A+ LF ++   + V WN+M+ G   +G     L++F  M  
Sbjct: 230 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 289

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            GVE D  T + VL AC+  G +S      H    K     EV   + L+D   + G   
Sbjct: 290 LGVEVDLTTLVSVLVACANIGNLSLG-RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 348

Query: 748 EAGELILSM 756
            A E+ + M
Sbjct: 349 GATEVFVKM 357


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 231/739 (31%), Positives = 355/739 (48%), Gaps = 101/739 (13%)

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NV 328
           +SDLG  +      YA  + L     +V L+N  + G+      H ++  F ++ +S ++
Sbjct: 62  LSDLGAIY------YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDL 115

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-------- 380
           + +S T+  A++A +G  +   G  IHG  +  G  S +++G++++ MY K         
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARK 175

Query: 381 --------------GCVCGLRT----------------------DQFTLASVLRASSSLP 404
                           + G R                       D  TL  +L A + L 
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           E L L  QIH  A K    +  +V T  I +Y + G +  A  LF      D+  +NAMI
Sbjct: 236 E-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMI 294

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  +  +  +L LF  +  SG +L   T+ + V   G L+++     +H Y++KS F 
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNFL 351

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
               VS+ +  +Y K   +  A+ +F++ P     +W  MISG   NG  + A+S++ +M
Sbjct: 352 SHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           + S   P+  T   ++ A + L AL  G+ +H  +   D  S  +V  +L+ MYAKCG+I
Sbjct: 412 QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            +A  LF  M  +N V WN M+ G   HG+G+E L +F +M   G+ P  VTF+ VL AC
Sbjct: 472 AEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYAC 531

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV E  E F+ M  +YG EP V+HY+ +VD LGRAG  + A + I +MP +   S+
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSV 591

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
              LLGACR+  DT   + V+EKL  L+P +   +VLLSNI +A   +    + R   K+
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651

Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           + + K P                          I  K+E L  +++E GY P+T+  L D
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHD 711

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-------------------- 901
           VEEEE+E  +  HSE+LA A+GLI+T P + I   K                        
Sbjct: 712 VEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIV 771

Query: 902 ---ANRFHHLRDGMCPCAD 917
              ANRFHH +DG+C C D
Sbjct: 772 VRDANRFHHFKDGVCSCGD 790



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 150/625 (24%), Positives = 266/625 (42%), Gaps = 90/625 (14%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S + +  + + + S S L     THA+I+      D  L   L    S  G++ YAR +F
Sbjct: 19  SKNNFLDLFKRSTSISHL---AQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
             +   D+  +N ++  ++ +     E+      +F  LR+S       +      +  +
Sbjct: 76  LSVQRPDVFLFNVLMRGFSVN-----ESPHSSLAVFAHLRKSTDLKPNSSTYAF-AISAA 129

Query: 172 SGYV--WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           SG+    A   +HG A+  G   +  +   +V +Y KF ++ +A+ +FD M E+D +LW 
Sbjct: 130 SGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189

Query: 230 VMLRAYAENGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
            M+  Y +N    E   +F DL + S    D  ++  +L  +++L + R   Q+ + A K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249

Query: 288 LLLYNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIEC 319
              Y+++                             ++V +N  + GY   G+   ++  
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSL 309

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  ++ S  +  S T LV+L  V+G  +L L   IHG +LKS F S   V  +L  +YSK
Sbjct: 310 FKELMLSGAKLKSST-LVSLVPVSG--HLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSK 366

Query: 380 MGCV---------------------------CGLRTDQFTLASVLRASSSLPE------- 405
           +  +                            GL  D  +L   ++ S   P        
Sbjct: 367 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCI 426

Query: 406 --------GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                    L L K +H      D  +  +VSTALI +Y + GS+AEA  LF+     + 
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNE 486

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HA 516
            TWN MI GY L  +  +AL +FS M  SG     +T    + AC    ++K+G ++ ++
Sbjct: 487 VTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNS 546

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
              + GFE  +   + ++D+  + G +  A      +P  P    W T++  C  + + +
Sbjct: 547 MIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTN 606

Query: 576 LALSIYHQMRLSGVVPDEFTFAILV 600
           LA ++    +L  + PD   + +L+
Sbjct: 607 LARTV--SEKLFELDPDNVGYHVLL 629



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 2/195 (1%)

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           Q HA  +  GF  D+ + + +       GA+  A+ IF  +  PD   +  ++ G   N 
Sbjct: 38  QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 573 EEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
               +L+++  +R S  + P+  T+A  + A+S       G  IH   I   C S+  +G
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGV 690
            ++V MY K   +EDA  +F +M  ++T+LWN M+ G  ++    E++++F D+      
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 691 EPDSVTFIGVLSACS 705
             D+ T + +L A +
Sbjct: 218 RLDTTTLLDILPAVA 232



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 9/210 (4%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T   L   ++SL   +Q S FS +  +     IL        L LGK  H  + ++    
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTIT--CILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
             +++  L+ MY++CGS+  ARRLFD MP ++ ++WN++++ Y   G G      E   +
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQ-----EALTI 508

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-KIGLVWDEFVSGALVNIYS 205
           F  +  S    + +T   +L  C  +G V   + +    + + G          +V+I  
Sbjct: 509 FSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILG 568

Query: 206 KFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           + G ++ A    + M  +    +W+ +L A
Sbjct: 569 RAGHLQRALQFIEAMPIQPGPSVWETLLGA 598


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 227/749 (30%), Positives = 376/749 (50%), Gaps = 79/749 (10%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           L  +L+ C+S  ++     VHG A+  GL   D  +   LV +Y    + R+A  +F  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 221 QERDVVL---WKVMLRAYAENG--FGEEVFHLFVDLHRSGLCPDDESVQCV------LGV 269
                     W  ++R     G      +F+L +  H S   PD  +   V      LG 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 270 IS----------DLGKRHEEQVQAYAIKL-----LLYNNNS--------NVVLWNKKLSG 306
           I+           LG   +  V +  IK+     LL++           + VLWN  + G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y++ G    A+E F +M  S  + +  T    L+  A   +L  G Q+H   +K G  S 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 367 VIVGNSLINMYSKMGCV------------------------------------------- 383
           V V N+L++MY+K  C+                                           
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G+R D  TL S+L A + L  G +  K++H + ++N    D F+ +AL+D+Y +  ++ 
Sbjct: 342 SGIRPDSVTLVSLLPALTDL-NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A+ ++++    D+   + MI GY+L+  S +A+++F ++   G R + + IA+ + AC 
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            +  +K G+++H+YA+K+ +E    V S ++DMY KCG +  +  IF+ I A D+V W +
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MIS    NGE + AL+++ +M + GV     T + ++ A + L A+  G++IH  +IK  
Sbjct: 521 MISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP 580

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             +D F   +L+DMY KCGN+E A+ +F+ M  +N V WN+++     +G  +E++ L  
Sbjct: 581 IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLR 640

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M+  G + D VTF+ ++SAC++ G V E    F  M E+Y I P +EH++ +VD   RA
Sbjct: 641 HMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRA 700

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G+  +A ELI+ MPF+  A +  ALL ACRV  + E  +  +++L  L+P +S  YVL+S
Sbjct: 701 GKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           NI A A +WD V+  R  MK   V+K P 
Sbjct: 761 NINAVAGRWDGVSKVRRLMKDTKVQKIPG 789



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 179/700 (25%), Positives = 305/700 (43%), Gaps = 86/700 (12%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSS-QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
            ++LR  +S S L LG   H R + +     D  L   L+ MY        A  +F  +P
Sbjct: 43  LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP 102

Query: 116 DRDL---ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
                  + WN ++     +G+  +  +   F L      S       T   ++K C + 
Sbjct: 103 RGAAACALPWNWLIRGLTMAGDYRSALL---FYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G +     VH  A  +GL  D FV  AL+ +Y+  G + +A+ +FDGM ERD VLW VM+
Sbjct: 160 GAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI---SDL-------------GKR 276
             Y + G       LF D+  SG  P+  ++ C L V    SDL             G  
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 277 HEEQVQAYAI-------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            E  V    +             KL       ++V WN  +SG +Q G    A+  F +M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            +S ++ DSVT +  L A+   +  N G+++HG  +++  +  V + ++L+++Y K   V
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 384 -------------------------------------------CGLRTDQFTLASVLRAS 400
                                                       G+R +   +ASVL A 
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           +S+   + L +++H +A+KN      +V +AL+D+Y + G +  + Y+F      D  TW
Sbjct: 460 ASM-AAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTW 518

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N+MI  +  +    +AL LF  M   G +   +TI++ + AC  L  +  GK++H   +K
Sbjct: 519 NSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK 578

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
                DL   S ++DMY KCG +  A  +F  +P  ++V+W ++I+     G    ++S+
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSL 638

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI---KLDCSSDPFVGISLVDM 637
              M+  G   D  TF  LV A +    +++G ++   +    ++    + F    +VD+
Sbjct: 639 LRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFA--CMVDL 696

Query: 638 YAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           Y++ G ++ A  L   M  + +  +W A+L     H N E
Sbjct: 697 YSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVE 736



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 271/619 (43%), Gaps = 104/619 (16%)

Query: 37  SLLPFLQK-SHFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +LL +L+  +H S+    S  F  +++   +   + LG+  H          D F+ + L
Sbjct: 128 ALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSAL 187

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY+  G L  AR++FD M +RD + WN ++  Y  +G     +V+    LF  +R S 
Sbjct: 188 IKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAG-----SVSSAVELFGDMRASG 242

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  TLA  L +  +   ++    +H  A+K GL  +  V+  LV++Y+K   + +  
Sbjct: 243 CEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGW 302

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL- 273
            LF  M   D+V W  M+    +NGF ++   LF D+ +SG+ PD  ++  +L  ++DL 
Sbjct: 303 KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362

Query: 274 GKRHEEQVQAYAIKLLLY----------------------------NNNSNVVLWNKKLS 305
           G    +++  Y ++  ++                            +   +VV+ +  +S
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY+  G +  A++ F  ++   ++ ++V     L A A    + LGQ++H   LK+ +  
Sbjct: 423 GYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEG 482

Query: 366 AVIVGNSLINMYSKMG-------------------------------------------C 382
              V ++L++MY+K G                                           C
Sbjct: 483 RCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMC 542

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           + G++    T++SVL A +SLP  ++  K+IH   IK    AD F  +ALID+Y + G++
Sbjct: 543 MEGVKYSNVTISSVLSACASLP-AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNL 601

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  +FE+    +  +WN++I  Y       +++ L  HM   G + D +T    V AC
Sbjct: 602 EWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSAC 661

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVS------------SGILDMYVKCGAMVDAQSIF 550
                       HA  ++ G  L  C++            + ++D+Y + G +  A  + 
Sbjct: 662 A-----------HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELI 710

Query: 551 NDIP-APDDVAWTTMISGC 568
            D+P  PD   W  ++  C
Sbjct: 711 VDMPFKPDAGIWGALLHAC 729


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 228/685 (33%), Positives = 347/685 (50%), Gaps = 82/685 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A+  +V MI   +  +  TF   L + A
Sbjct: 55  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA 114

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK G+   + V  SLI+MY + G                      
Sbjct: 115 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNG---------------------- 152

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  ++++   +   D V+     TALI  Y   G +A A+ +F+     D+ +WNAM
Sbjct: 153 --RLEDARKVFDQSSHRDVVS----YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 206

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  + N+ +ALELF  M  +  R DE T+ + V AC     ++ G+Q+H++    GF
Sbjct: 207 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGF 266

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y+KCG +  A  +F  +   D ++W T+I G         AL ++ +
Sbjct: 267 GSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 326

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-----LDCSSDPFVGISLVDMY 638
           M  SG  P++ T   ++ A + L A+E GR IH  + K      + SS      SL+DMY
Sbjct: 327 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR---TSLIDMY 383

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG+IE A  +F  +  R+   WNAM+ G A HG       +F  M+ + +EPD +TF+
Sbjct: 384 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 443

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
           G+LSACS++G++      F  M+E Y I P++EHY  ++D LG +G  KEA E+I +M  
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 503

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E    +  +LL AC++  + E G+  A+ L+ +EP +  +YVLLSNI+A A +W++V   
Sbjct: 504 EPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 563

Query: 819 RGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDT 855
           R  +  K +KK P                          I+  +E +   ++E G+VPDT
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN----------------- 896
             VL ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                 
Sbjct: 624 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683

Query: 897 -KEPLYA---NRFHHLRDGMCPCAD 917
            K  + A    RFHH RDG+C C D
Sbjct: 684 YKREIIARDRTRFHHFRDGVCSCND 708



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 188/396 (47%), Gaps = 37/396 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC----RNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           + IH   IK      ++  + LI+ +C        +  A  +FE     +L  WN M  G
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 77

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           + LS++   AL L+  M + G   +  T    +K+C      ++G+Q+H + +K G++LD
Sbjct: 78  HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 137

Query: 527 LCVSSGILDMYVKCGAMVD-------------------------------AQSIFNDIPA 555
           L V + ++ MYV+ G + D                               AQ +F++IP 
Sbjct: 138 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 197

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V+W  MISG  + G    AL ++ +M  + V PDE T   +V A +   ++E GRQ+
Sbjct: 198 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 257

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H+ +      S+  +  +L+D+Y KCG +E A  LF+ +  ++ + WN ++ G       
Sbjct: 258 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 317

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYS 734
           +E L LF++M   G  P+ VT + +L AC++ G +    + + ++ +   G+     H +
Sbjct: 318 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT 377

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            L+D   + G  + A ++  S+   + +S +  + G
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 413



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 228/513 (44%), Gaps = 96/513 (18%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + +L+ WN++   +A S +           L+  +       +  T  
Sbjct: 53  LPYAISVFETIQEPNLLIWNTMFRGHALSSDP-----VSALYLYVCMISLGLLPNCYTFP 107

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S      + +HG+ LK+G   D +V  +L+++Y + G++ +A+ +FD    R
Sbjct: 108 FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 167

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV +  ++  YA  G+      +F ++                                
Sbjct: 168 DVVSYTALITGYASKGYIASAQKMFDEI-------------------------------- 195

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             IK        +VV WN  +SGY + G+N  A+E F  M+++NV+ D  T +  ++A A
Sbjct: 196 -PIK--------DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 246

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---CGL-------------- 386
            + ++ LG+Q+H      GF S + + N+LI++Y K G V   CGL              
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNT 306

Query: 387 --------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                       +  T+ S+L A + L   + + + IHV+  K 
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG-AIEIGRWIHVYINKR 365

Query: 421 -DTVAD-SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
              VA+ S   T+LID+Y + G +  A+ +F++     L++WNAMIFG+ +   ++ A +
Sbjct: 366 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDM 536
           +FS M  +    D+IT    + AC    ML  G+ +   +MK  +++   L     ++D+
Sbjct: 426 IFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-SMKEDYKITPKLEHYGCMIDL 484

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
               G   +A+ + N +   PD V W +++  C
Sbjct: 485 LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 517



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 47/292 (16%)

Query: 508 LKQGKQMHAYAMKSGFE---------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           L+  + +HA  +K+G           ++ CV S   D       +  A S+F  I  P+ 
Sbjct: 15  LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFD------GLPYAISVFETIQEPNL 68

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           + W TM  G   + +   AL +Y  M   G++P+ +TF  L+K+ +   A  +G+QIH +
Sbjct: 69  LIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGH 128

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDA--------------------------YI--- 649
           ++KL    D +V  SL+ MY + G +EDA                          YI   
Sbjct: 129 VLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASA 188

Query: 650 --LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F ++ +++ V WNAM+ G A+ GN +E L+LF++M    V PD  T + V+SAC+ +
Sbjct: 189 QKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQS 248

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
             + E     H   + +G    ++  + L+D   + G  + A  L   + ++
Sbjct: 249 ASI-ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK 299



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 142/308 (46%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G +  A+++FD++P +D++SWN++++ YA +G    
Sbjct: 159 KVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETG---- 214

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            N  E   LF+ + ++       T+  ++  C  S  +     VH +    G   +  + 
Sbjct: 215 -NNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++Y K G++  A  LF+G+  +DV+ W  ++  Y      +E   LF ++ RSG  
Sbjct: 274 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYNN----------- 293
           P+D ++  +L   + LG             KR +    A + +  L +            
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 393

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                  N ++  WN  + G+   G  + A + F  M ++ ++ D +TF+  L+A + + 
Sbjct: 394 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 453

Query: 347 NLNLGQQI 354
            L+LG+ I
Sbjct: 454 MLDLGRHI 461



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 12/229 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   S++     ++ + LG+  H+ I +     +  + N L+ +Y +CG +  A  LF+ 
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +  +D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 296 LSYKDVISWNTLIGGYTH-----MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 350

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+        +L+++Y+K G I  A+ +FD +  R +  W  M
Sbjct: 351 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAM 410

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +A +G     F +F  + ++ + PDD +   +L   S     DLG+
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR 459



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 14/157 (8%)

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           +L+ MY++CG +  A+++FD + +R L SWN+++  +A  G  NA      F +F  +R+
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA-----AFDIFSRMRK 432

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYA---LKIGLVWDEFVSGALVNIYSKFGK 209
           +      +T   LL  C  SG +     +        KI    + +  G ++++    G 
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY--GCMIDLLGHSGL 490

Query: 210 IREAKFLFDGMQ-ERDVVLWKVMLRA---YAENGFGE 242
            +EA+ + + M+ E D V+W  +L+A   YA    GE
Sbjct: 491 FKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGE 527


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 225/710 (31%), Positives = 361/710 (50%), Gaps = 95/710 (13%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           + WN  ++   + GD  G+I  F  M+ S V+ DS TF     + +   +++ G+Q+HG 
Sbjct: 10  LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 69

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLR--------ASSSLPE-G 406
            LKSGF     VGNSL+  Y K   V   R   D+ T   V+          S+ L E G
Sbjct: 70  ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 129

Query: 407 LHLSKQIHVHAIKND--TVADSFVSTA-----------------------------LIDV 435
           L +  Q+ V  I+ D  T+   F   A                             L+D+
Sbjct: 130 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 189

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G +  A+ +F       + ++ +MI GY     + +A++LF  M   G   D  T+
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
              +  C    +L +GK++H +  ++    D+ VS+ ++DMY KCG+M +A+ +F+++  
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYH----QMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            D ++W T+I G   N   + ALS+++    + R S   PDE T A ++ A + L+A ++
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVACVLPACASLSAFDK 366

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           GR+IH  +++    SD  V  SLVDMYAKCG +  A++LF  +  ++ V W  M+ G   
Sbjct: 367 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 426

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G+E + LF  M+  G+E D ++F+ +L ACS++GLV E +  F++MR +  IEP VE
Sbjct: 427 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 486

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD L R G   +A   I +MP    A++  ALL  CR+  D +  + VAEK+  L
Sbjct: 487 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 546

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFA---- 837
           EP ++  YVL++NI+A A +W+ V   R  + ++ ++K+P           ++  A    
Sbjct: 547 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 606

Query: 838 -----KVEGLIKRIK----EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 +E  +++++    E GY P T + L+D EE EKE AL  HSEKLA A G+IS+ 
Sbjct: 607 NPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSG 666

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
              +I                     L+ +E +   +NRFH  +DG C C
Sbjct: 667 HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 716



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 179/626 (28%), Positives = 298/626 (47%), Gaps = 59/626 (9%)

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           FD++     + WN ++   A SG     + +    LF+ +  S       T + + K   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSG-----DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFS 55

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           S   V   E +HG+ LK G      V  +LV  Y K  ++  A+ +FD M ERDV+ W  
Sbjct: 56  SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 115

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYA 285
           ++  Y  NG  E+   +FV +  SG+  D  ++  V    +D     LG+     V +  
Sbjct: 116 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR----AVHSIG 171

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAG 344
           +K      +      N  L  Y + GD   A   F  M  RS V Y S+    A   +AG
Sbjct: 172 VKACFSREDR---FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 228

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
            + + L +++    +    Y+   V N          C    R               L 
Sbjct: 229 -EAVKLFEEMEEEGISPDVYTVTAVLN----------CCARYRL--------------LD 263

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           EG    K++H    +ND   D FVS AL+D+Y + GSM EAE +F      D+ +WN +I
Sbjct: 264 EG----KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 319

Query: 465 FGYILSNNSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
            GY  +  +++AL LF ++    +R   DE T+A  + AC  L    +G+++H Y M++G
Sbjct: 320 GGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 378

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           +  D  V++ ++DMY KCGA++ A  +F+DI + D V+WT MI+G   +G    A+++++
Sbjct: 379 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 438

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAK 640
           QMR +G+  DE +F  L+ A S    +++G +   N+++ +C  +P V     +VDM A+
Sbjct: 439 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLAR 497

Query: 641 CGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
            G++  AY   + M +  +  +W A+L G   H + +   K+ E  K   +EP++  +  
Sbjct: 498 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE--KVFELEPENTGYY- 554

Query: 700 VLSACSYTGLVSEAYENFHLMREKYG 725
           VL A  Y    +E +E    +R++ G
Sbjct: 555 VLMANIYAE--AEKWEQVKRLRKRIG 578



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 224/559 (40%), Gaps = 116/559 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  IL S       + N+L+  Y +   +  AR++FD+M +RD+ISWNSI+  Y  
Sbjct: 63  GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        +G  +F  +  S       T+  +   C  S  +     VH   +K    
Sbjct: 123 NGLAE-----KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            ++     L+++YSK G +  AK +F  M +R VV +  M+  YA  G   E   LF ++
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS----------- 295
              G+ PD  +V  VL   +     D GKR  E ++   +   ++ +N+           
Sbjct: 238 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297

Query: 296 -------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY--DSVTFLVALA 340
                        +++ WN  + GY +    + A+  F N++    ++  D  T    L 
Sbjct: 298 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLP 356

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A A     + G++IHG  +++G++S   V NSL++MY+K G +                 
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL----------------- 399

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
                       +  H + +D  +   VS                              W
Sbjct: 400 ------------LLAHMLFDDIASKDLVS------------------------------W 417

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----H 515
             MI GY +     +A+ LF+ M  +G   DEI+  + + AC    ++ +G +      H
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEE 574
              ++   E   C    I+DM  + G ++ A     ++P P D   W  ++ GC      
Sbjct: 478 ECKIEPTVEHYAC----IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC------ 527

Query: 575 DLALSIYHQMRLSGVVPDE 593
                I+H ++L+  V ++
Sbjct: 528 ----RIHHDVKLAEKVAEK 542



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 37/304 (12%)

Query: 71  LGKSTHARILNSS-QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           LG++ H+  + +     DRF  N L+ MYS+CG L  A+ +F +M DR ++S+ S++A Y
Sbjct: 163 LGRAVHSIGVKACFSREDRF-CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 221

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           A  G        E  +LF  + E        T+  +L  C     +   + VH +  +  
Sbjct: 222 AREGLAG-----EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 276

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF- 248
           L +D FVS AL+++Y+K G ++EA+ +F  M+ +D++ W  ++  Y++N +  E   LF 
Sbjct: 277 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 336

Query: 249 VDLHRSGLCPDDESVQCVLGVISDL-------------------GKRH--EEQVQAYA-- 285
           + L      PD+ +V CVL   + L                     RH     V  YA  
Sbjct: 337 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 396

Query: 286 ----IKLLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
               +  +L+++  + ++V W   ++GY   G    AI  F  M ++ ++ D ++F+  L
Sbjct: 397 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 456

Query: 340 AAVA 343
            A +
Sbjct: 457 YACS 460



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 15/218 (6%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           I   ++K+ Y N      +LL  L++  FS    +     +L    S S    G+  H  
Sbjct: 318 IIGGYSKNCYANEALSLFNLL--LEEKRFSPDERTVA--CVLPACASLSAFDKGREIHGY 373

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I+ +    DR + N+L+ MY++CG+L+ A  LFD +  +DL+SW  ++A Y   G G   
Sbjct: 374 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK-- 431

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV---WASETVHGYALKIGLVWDEF 195
              E   LF  +R++      ++   LL  C  SG V   W    +  +  KI    + +
Sbjct: 432 ---EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 488

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
               +V++ ++ G + +A    + M    D  +W  +L
Sbjct: 489 --ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 215/628 (34%), Positives = 333/628 (53%), Gaps = 61/628 (9%)

Query: 349 NLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCV------------CGLRTDQFTLAS 395
           NLGQ  +   L   F Y  V + N++I  YS+                 G+  D FT   
Sbjct: 100 NLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPY 159

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           VL+A + L +   LS  IH   IK    +D FV   L+ +Y + G +  A+ +F+     
Sbjct: 160 VLKACTELLD-FGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHR 218

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
            + +W ++I GY  +  + +AL +FS M  +G + D I + + ++A   +  L+QG+ +H
Sbjct: 219 TIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIH 278

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
            + +K G E +  +   +   Y KCG +  A+S F+ +   + + W  MISG   NG  +
Sbjct: 279 GFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAE 338

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            A++++H M    + PD  T    V AS+ + +LE  + +   + K +  SD FV  SL+
Sbjct: 339 EAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLI 398

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
           DMYAKCG++E A  +F +   ++ V+W+AM++G   HG G E + L+  MK  GV P+ V
Sbjct: 399 DMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDV 458

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
           TFIG+L+AC+++GLV E +E FH M++ + I P  EHYS +VD LGRAG   EA   I+ 
Sbjct: 459 TFIGLLTACNHSGLVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMK 517

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
           +P E   S+  ALL AC++      G++ A KL +L+P+++  YV LSN++A++  WD V
Sbjct: 518 IPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCV 577

Query: 816 TSARGEMKRKNVKKD-----------------------PADLIFAKVEGLIKRIKEGGYV 852
              R  M+ K + KD                        A  IF +++ L +R+KE G+V
Sbjct: 578 AHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFV 637

Query: 853 PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------- 893
           P T+ VL D+  EEKE  L +HSE++A AYGLIST P + +                   
Sbjct: 638 PYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLI 697

Query: 894 --LSNKEPLY--ANRFHHLRDGMCPCAD 917
             L  +E +   ANRFHH +DG+C C D
Sbjct: 698 SKLVEREIIVRDANRFHHFKDGLCSCGD 725



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 176/339 (51%), Gaps = 3/339 (0%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           QIH   + +    + F+ T L++     G +  A  LF+     D+  WNA+I  Y  +N
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
                +E++  M  +G   D  T    +KAC  LL       +H   +K GF  D+ V +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
           G++ +Y KCG +  A+ +F+ +     V+WT++ISG   NG+   AL ++ QMR +GV P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D      +++A + +  LEQGR IH  +IK+    +P + ISL   YAKCG +  A   F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            QM   N ++WNAM+ G A++G+ EE + LF  M +  ++PDSVT    + A +  G + 
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373

Query: 712 EA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            A + + ++ +  YG +  V   + L+D   + G  + A
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVN--TSLIDMYAKCGSVEFA 410



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 160/353 (45%), Gaps = 46/353 (13%)

Query: 70  LLGKSTHARILNSSQIPDR----------FLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L+  STH R L+  QI +R          FL   L+   S  G + YAR+LFD+    D+
Sbjct: 62  LIDNSTHKRHLD--QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDV 119

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
             WN+I+ +Y+ +         +   ++R +R +       T   +LK C        S 
Sbjct: 120 FMWNAIIRSYSRNNM-----YRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSC 174

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            +HG  +K G   D FV   LV +Y+K G I  AK +FDG+  R +V W  ++  YA+NG
Sbjct: 175 IIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNG 234

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYN------ 292
              E   +F  +  +G+ PD  ++  +L   +D+    +   +  + IK+ L +      
Sbjct: 235 KAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLI 294

Query: 293 ----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                                   +NV++WN  +SGY + G    A+  F  MI  N++ 
Sbjct: 295 SLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKP 354

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           DSVT   A+ A A   +L L Q +     KS + S + V  SLI+MY+K G V
Sbjct: 355 DSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSV 407



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 34/312 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D  L    H +I+      D F+ N L+ +Y++CG +  A+ +FD +  R 
Sbjct: 160 VLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRT 219

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW SI++ YA +G+       E  R+F  +R +      + L  +L+       +   
Sbjct: 220 IVSWTSIISGYAQNGKA-----VEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQG 274

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
            ++HG+ +K+GL  +  +  +L   Y+K G +  AK  FD M+  +V++W  M+  YA+N
Sbjct: 275 RSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKN 334

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ---------------- 282
           G  EE  +LF  +    + PD  +V+  +   + +G     Q                  
Sbjct: 335 GHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVN 394

Query: 283 -------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                         +A ++   N++ +VV+W+  + GY   G    AI  +  M ++ V 
Sbjct: 395 TSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVF 454

Query: 330 YDSVTFLVALAA 341
            + VTF+  L A
Sbjct: 455 PNDVTFIGLLTA 466



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 5/203 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SILR      DL  G+S H  ++      +  L  +L   Y++CG +  A+  FD+M   
Sbjct: 260 SILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTT 319

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++I WN++++ YA +G        E   LF  +         +T+   +      G +  
Sbjct: 320 NVIMWNAMISGYAKNGHAE-----EAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLEL 374

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           ++ +  Y  K     D FV+ +L+++Y+K G +  A+ +FD   ++DVV+W  M+  Y  
Sbjct: 375 AQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGL 434

Query: 238 NGFGEEVFHLFVDLHRSGLCPDD 260
           +G G E  +L+  + ++G+ P+D
Sbjct: 435 HGQGWEAINLYHVMKQAGVFPND 457


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 225/710 (31%), Positives = 361/710 (50%), Gaps = 95/710 (13%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           + WN  ++   + GD  G+I  F  M+ S V+ DS TF     + +   +++ G+Q+HG 
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLR--------ASSSLPE-G 406
            LKSGF     VGNSL+  Y K   V   R   D+ T   V+          S+ L E G
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280

Query: 407 LHLSKQIHVHAIKND--TVADSFVSTA-----------------------------LIDV 435
           L +  Q+ V  I+ D  T+   F   A                             L+D+
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G +  A+ +F       + ++ +MI GY     + +A++LF  M   G   D  T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
              +  C    +L +GK++H +  ++    D+ VS+ ++DMY KCG+M +A+ +F+++  
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYH----QMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            D ++W T+I G   N   + ALS+++    + R S   PDE T A ++ A + L+A ++
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVACVLPACASLSAFDK 517

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           GR+IH  +++    SD  V  SLVDMYAKCG +  A++LF  +  ++ V W  M+ G   
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G+E + LF  M+  G+E D ++F+ +L ACS++GLV E +  F++MR +  IEP VE
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD L R G   +A   I +MP    A++  ALL  CR+  D +  + VAEK+  L
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFA---- 837
           EP ++  YVL++NI+A A +W+ V   R  + ++ ++K+P           ++  A    
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757

Query: 838 -----KVEGLIKRIK----EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 +E  +++++    E GY P T + L+D EE EKE AL  HSEKLA A G+IS+ 
Sbjct: 758 NPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSG 817

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
              +I                     L+ +E +   +NRFH  +DG C C
Sbjct: 818 HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 195/679 (28%), Positives = 322/679 (47%), Gaps = 59/679 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+    +  L  GK     I  +  + D  L + L  MY+ CG L  A R+FD++   
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             + WN ++   A SG+      +    LF+ +  S       T + + K   S   V  
Sbjct: 159 KALFWNILMNELAKSGD-----FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +HG+ LK G      V  +LV  Y K  ++  A+ +FD M ERDV+ W  ++  Y  
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLLLYN 292
           NG  E+   +FV +  SG+  D  ++  V    +D     LG+     V +  +K     
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR----AVHSIGVKACFSR 329

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLG 351
            +      N  L  Y + GD   A   F  M  RS V Y S+    A   +AG + + L 
Sbjct: 330 EDR---FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG-EAVKLF 385

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           +++    +    Y+   V N          C    R               L EG    K
Sbjct: 386 EEMEEEGISPDVYTVTAVLN----------CCARYRL--------------LDEG----K 417

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H    +ND   D FVS AL+D+Y + GSM EAE +F      D+ +WN +I GY  + 
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477

Query: 472 NSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
            +++AL LF ++    +R   DE T+A  + AC  L    +G+++H Y M++G+  D  V
Sbjct: 478 YANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           ++ ++DMY KCGA++ A  +F+DI + D V+WT MI+G   +G    A+++++QMR +G+
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDA 647
             DE +F  L+ A S    +++G +   N+++ +C  +P V     +VDM A+ G++  A
Sbjct: 597 EADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655

Query: 648 YILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           Y   + M +  +  +W A+L G   H + +   K+ E  K   +EP++  +  VL A  Y
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE--KVFELEPENTGYY-VLMANIY 712

Query: 707 TGLVSEAYENFHLMREKYG 725
               +E +E    +R++ G
Sbjct: 713 AE--AEKWEQVKRLRKRIG 729



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 192/382 (50%), Gaps = 12/382 (3%)

Query: 379 KMGCVCG-LRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
           K+ CV G    D  TL SVL+    S SL +G    K++      N  V DS + + L  
Sbjct: 82  KLLCVSGKWDIDPRTLCSVLQLCADSKSLKDG----KEVDNFIRGNGFVIDSNLGSKLSL 137

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y   G + EA  +F+         WN ++     S +   ++ LF  M +SG  +D  T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            +   K+   L  +  G+Q+H + +KSGF     V + ++  Y+K   +  A+ +F+++ 
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D ++W ++I+G V NG  +  LS++ QM +SG+  D  T   +    +    +  GR 
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H+  +K   S +     +L+DMY+KCG+++ A  +F++M  R+ V + +M+ G A+ G 
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK-YGIEPEVEHY 733
             E +KLFE+M+  G+ PD  T   VL+ C+   L+ E       ++E   G +  V + 
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437

Query: 734 SFLVDALGRAGRTKEAGELILS 755
             L+D   + G  +EA EL+ S
Sbjct: 438 --LMDMYAKCGSMQEA-ELVFS 456


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 267/911 (29%), Positives = 433/911 (47%), Gaps = 104/911 (11%)

Query: 72  GKSTHARILNSSQIP---DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           G+  HA IL S +I      FL ++L+ M+++CG+L  A  L D+     + S  +++ A
Sbjct: 62  GQRLHAHIL-SRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFAS--VYSCTAMIRA 118

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           +   G  +     +   LF  +       +   L  L+  C   G + A   +H      
Sbjct: 119 WMEHGRPD-----KAMELFDRMEVRPNCHA---LIALVNACSCLGNLAAGRRIHSQISDR 170

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGM---QERDVVLWKVMLRAYAENGFGEEVF 245
               +  +  AL+++YSK G + +AK  FD +    +RDVV W  M+ A+  NG   E  
Sbjct: 171 DFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREAL 230

Query: 246 HLFVDLHRSGLCPDDE-SVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL 304
            LF D+ R G  P +  +   VL    + G    E V+A   +++         +    +
Sbjct: 231 QLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALV 290

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
             Y ++G    A E F   +R   +  S + +   A ++        Q+    +L+  F 
Sbjct: 291 DSYGKLGSLDDAWEVF---LRKGDEEPSTSLVTCSAMISACWQNGWPQE----SLRLFFA 343

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG----LHLSKQIHVHAIKN 420
                    +N+        G +    TL SVL A S L  G      L + + V +   
Sbjct: 344 ---------MNLE-------GTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATR 387

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           D V    + T L+  Y R+  +  A   F+     D+ +WNAM   Y+  + S +AL LF
Sbjct: 388 DNV----LGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLF 443

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQ---GKQMHAYAMKSGFELDLCVSSGILDMY 537
             M   G R    T  TA+ AC           GK++ +   ++G E D  V++  L+MY
Sbjct: 444 ERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMY 503

Query: 538 VKCGAMVDAQSIFNDI-PAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEF 594
            KCG++ DA+++F  I PA  D + W +M++    +G    A  ++  M    +V P++ 
Sbjct: 504 AKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKV 563

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ- 653
           TF  ++ AS+  T++ QGR+IHA ++     SD  +  +L++MYAKCG+++DA  +F + 
Sbjct: 564 TFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKS 623

Query: 654 -MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
             +  + + W +++ G AQ+G  E  LKLF  M+  GV P+ VTFI  L+AC++ G + +
Sbjct: 624 SSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQ 683

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
             E    M   +GI P  +H+S +VD LGR GR  EA E +L    +A      ALL AC
Sbjct: 684 GCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEA-EKLLERTSQADVITWMALLDAC 742

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP- 831
           +   + E G+  AE++M L+P  +S+Y++L++++AAA +W++  + R  M  K ++ DP 
Sbjct: 743 KNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 802

Query: 832 ----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                 ++ I+ ++E L   IK  GYV DT  VL DV +E KER
Sbjct: 803 CSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKER 862

Query: 870 ALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANRFH 906
            L  HSEKLA A+GL+STP   P  VI                  ++ ++ L   ++R+H
Sbjct: 863 LLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYH 922

Query: 907 HLRDGMCPCAD 917
           H   G C C D
Sbjct: 923 HFTSGTCSCGD 933



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 165/687 (24%), Positives = 286/687 (41%), Gaps = 150/687 (21%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP---DRDLISWNS 124
           +L  G+  H++I +     +  L N L++MYS+CGSL+ A++ FD++P    RD+++WN+
Sbjct: 156 NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNA 215

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASE--TV 181
           +++A+  +G        E  +LFR + R+     + +T   +L  C+ +G +   +   +
Sbjct: 216 MISAFLRNGSAR-----EALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAI 270

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREA--KFLFDGMQE--RDVVLWKVMLRAYAE 237
           HG  +  G+  + FV  ALV+ Y K G + +A   FL  G +E    +V    M+ A  +
Sbjct: 271 HGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQ 330

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG---------KRHEEQVQA----- 283
           NG+ +E   LF  ++  G  P   ++  VL   S L          ++  E V A     
Sbjct: 331 NGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNV 390

Query: 284 YAIKLLLYNNNSN----------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
               LL     SN                VV WN   + YLQ   +  A+  F  M+   
Sbjct: 391 LGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEG 450

Query: 328 VQYDSVTFLVALAAVAGTDNLN---LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
           V+    TF+ AL A A         +G++I     ++G      V N+ +NMY+K G + 
Sbjct: 451 VRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLA 510

Query: 385 GLRT----------------------------------------------DQFTLASVLR 398
             R                                               ++ T  +VL 
Sbjct: 511 DARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 570

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFD 456
           AS+S    +   ++IH   + N   +D+ +  AL+++Y + GS+ +A+ +F+  + +  D
Sbjct: 571 ASTS-RTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQED 629

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  W ++I GY     + +AL+LF  M   G R + +T  +A+ AC     L+QG +   
Sbjct: 630 VIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCE--- 686

Query: 517 YAMKSGFELD---LCVS---SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
             + SG   D   L  S   S I+D+  +CG + +A+ +       D + W  ++  C +
Sbjct: 687 --LLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKN 744

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           + E                                   LE+G +    +++L    DP V
Sbjct: 745 SKE-----------------------------------LERGERCAERIMQL----DPEV 765

Query: 631 G---ISLVDMYAKCGNIEDAYILFKQM 654
               I L  MYA  G   +A  + K M
Sbjct: 766 ASSYIVLASMYAAAGRWNEAATIRKTM 792



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 8/182 (4%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L  + S + +  G+  HAR++++    D  + N L+ MY++CGSL  A+ +FDK  
Sbjct: 565 FVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSS 624

Query: 116 --DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
               D+I+W S++A YA  G+          +LF ++++     + +T    L  C   G
Sbjct: 625 SNQEDVIAWTSLIAGYAQYGQAE-----RALKLFWTMQQQGVRPNHVTFISALTACNHGG 679

Query: 174 YV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            +    E + G     G++        +V++  + G++ EA+ L +   + DV+ W  +L
Sbjct: 680 KLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 739

Query: 233 RA 234
            A
Sbjct: 740 DA 741


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 192/554 (34%), Positives = 309/554 (55%), Gaps = 47/554 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++ IH H  ++    D F+  +LI +YC+ G++++A ++F+     D+ +W  +I GY  
Sbjct: 81  ARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQ 140

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++   +AL L   M  +  R    T  + +KA G       G+QMHA A+K   + D+ V
Sbjct: 141 NDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYV 200

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S +LDMY +C  M  A  +F+ + + ++V+W  +I+G    G+ +  L  + +M+ +G 
Sbjct: 201 GSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGF 260

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FT++ +  A + + ALEQGR +HA++IK       FV  +++ MYAK G++ DA  
Sbjct: 261 GATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARK 320

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++D R+ V WN ML   AQ+G G+E +  FE+++ +G++ + +TF+ VL+ACS+ GL
Sbjct: 321 VFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGL 380

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E  + F +M++ Y +EPE++HY   VD LGRAG  KEA   +  MP E +A++  ALL
Sbjct: 381 VKEGKQYFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 439

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR+  + + G++ A+ +  L+P D+   VLL NI+A+  QWDD    R  MK   VKK
Sbjct: 440 GACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKK 499

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           +PA                       + I+   E +  RIK+ GYVP+TD+VLL ++E+E
Sbjct: 500 EPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQE 559

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--AN 903
           +E  L YHSEK+A A+ LI+ P  + I                     +  +E +    N
Sbjct: 560 RETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTN 619

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  +G C C D
Sbjct: 620 RFHHFSNGSCSCGD 633



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 180/384 (46%), Gaps = 49/384 (12%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------- 384
           + A A + NL   + IH    +S       + NSLI+MY K G V               
Sbjct: 69  ITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDV 128

Query: 385 --------------------GL---------RTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                               GL         R   FT  S L+A+ +   G  + +Q+H 
Sbjct: 129 VSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC-GGRGIGEQMHA 187

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            A+K +   D +V +AL+D+Y R   M  A  +F+  D  +  +WNA+I G+    +   
Sbjct: 188 LAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGET 247

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
            L  F+ M  +G      T ++   A   +  L+QG+ +HA+ +KSG +L   V++ IL 
Sbjct: 248 TLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILG 307

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY K G+MVDA+ +F+ +   D V W TM++     G    A++ + ++R  G+  ++ T
Sbjct: 308 MYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQIT 367

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQ 653
           F  ++ A S    +++G+Q + +++K D + +P +   +S VD+  + G +++A I   +
Sbjct: 368 FLSVLTACSHGGLVKEGKQ-YFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFK 425

Query: 654 MDMRNT-VLWNAMLVGLAQHGNGE 676
           M M  T  +W A+L     H N +
Sbjct: 426 MPMEPTAAVWGALLGACRMHKNAK 449



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 114/215 (53%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L   + +H++  +S    D  + + ++ MY KCGA+ DA+ +F+ IP  D 
Sbjct: 69  ITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDV 128

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WT +I+G   N     AL +   M  +   P  FTF   +KA+        G Q+HA 
Sbjct: 129 VSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHAL 188

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K +   D +VG +L+DMYA+C  ++ A  +F  +D +N V WNA++ G A+ G+GE T
Sbjct: 189 AVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETT 248

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           L  F +M+ +G      T+  V SA +  G + + 
Sbjct: 249 LMKFAEMQRNGFGATHFTYSSVFSALARIGALEQG 283



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 34/327 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SI+     + +L   ++ H+ +  S    D FL N+L+ MY +CG++  AR +FD +P
Sbjct: 65  YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            RD++SW  ++  YA +     +   E   L   +  +    S  T    LK   + G  
Sbjct: 125 TRDVVSWTYLITGYAQN-----DMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              E +H  A+K  L  D +V  AL+++Y++  ++  A  +FD +  ++ V W  ++  +
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK------- 287
           A  G GE     F ++ R+G      +   V   ++ +G   + + V A+ IK       
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTA 299

Query: 288 ------LLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 L +Y                +  ++V WN  L+ + Q G    A+  F  + + 
Sbjct: 300 FVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKY 359

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +Q + +TFL  L A +    +  G+Q
Sbjct: 360 GIQLNQITFLSVLTACSHGGLVKEGKQ 386



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 35/273 (12%)

Query: 150 LRE-SITFTSRLTLAP-----LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           LRE  +  T  L   P     ++  C  S  +  +  +H +  +  L  D F+  +L+++
Sbjct: 47  LRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHM 106

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y K G + +A+ +FDG+  RDVV W  ++  YA+N    E   L  D+ R+   P   + 
Sbjct: 107 YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTF 166

Query: 264 QCVLGVISDLGKRH-EEQVQAYAIKLLL----------------------------YNNN 294
              L      G R   EQ+ A A+K  L                            + ++
Sbjct: 167 TSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS 226

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            N V WN  ++G+ + GD    +  F  M R+       T+    +A+A    L  G+ +
Sbjct: 227 KNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWV 286

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           H   +KSG      V N+++ MY+K G +   R
Sbjct: 287 HAHMIKSGQKLTAFVANTILGMYAKSGSMVDAR 319



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 21/195 (10%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           +HF+ SS     FS L        L  G+  HA ++ S Q    F+ N ++ MY++ GS+
Sbjct: 263 THFTYSSV----FSAL---ARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSM 315

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
           V AR++FD++  RDL++WN++L A+A  G G      E    F  +R+     +++T   
Sbjct: 316 VDARKVFDRVDQRDLVTWNTMLTAFAQYGLGK-----EAVAHFEEIRKYGIQLNQITFLS 370

Query: 165 LLKLCLSSGYVWAS----ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDG 219
           +L  C   G V       + +  Y ++  +  D +VS   V++  + G ++EA  F+F  
Sbjct: 371 VLTACSHGGLVKEGKQYFDMMKDYNVEPEI--DHYVS--FVDLLGRAGLLKEALIFVFKM 426

Query: 220 MQERDVVLWKVMLRA 234
             E    +W  +L A
Sbjct: 427 PMEPTAAVWGALLGA 441



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 2/192 (1%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P    +  ++ A +    L   R IH++L +   + D F+  SL+ MY KCG + DA 
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F  +  R+ V W  ++ G AQ+    E L L  DM      P   TF   L A    G
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
                 E  H +  KY ++ +V   S L+D   R  +   A  +   +  +   S +  +
Sbjct: 178 GRGIG-EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALI 236

Query: 769 LGACRVQGDTET 780
            G  R +GD ET
Sbjct: 237 AGFAR-KGDGET 247


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 198/579 (34%), Positives = 321/579 (55%), Gaps = 47/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   + FT+  VL+A +   + + L  +IH   +K     D FV T+L+ +Y +  +  +
Sbjct: 109 GFLPNNFTIPFVLKACARKLD-VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDD 167

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F++    ++ +W A+I GYI S +  +A+  F  +   G + D  ++   + AC  
Sbjct: 168 ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACAR 227

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L     G+ +  Y   SG   ++ V++ +LDMYVKCG +  A  IF+ +P  D V+W+TM
Sbjct: 228 LGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTM 287

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   NG    AL ++ QM+   + PD +T   ++ A + L AL+ G    + + + + 
Sbjct: 288 IQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEF 347

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            S+P +G +L+DMY+KCG++  A+ +F  M  ++ V+WNAM+VGL+ +G+ +    LF  
Sbjct: 348 LSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSL 407

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           ++ HG+ PD  TFIG+L  C++ G V+E  + F+ M+  + + P +EHY  +VD LGRAG
Sbjct: 408 VEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAG 467

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA +LI +MP + +A +  ALLG C++  DT   + V +KL+ LEP++S  YV LSN
Sbjct: 468 LLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSN 527

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I++  ++W++    R  MK + ++K  A                       + I+AK++ 
Sbjct: 528 IYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDE 587

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------- 893
           L + +K  G+VP T+FVL D+EEEEKE  L YHSEKLA A+GLI++PP+ VI        
Sbjct: 588 LGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRV 647

Query: 894 -------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                        ++ +E +    NRFH   DG C C D
Sbjct: 648 CGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRD 686



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 392 TLASVLRASSSLPEGLHLSKQI-HVHA--IKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
             +  L   + L  GL+   Q+ H+HA  ++     D+++   ++      GS   ++ +
Sbjct: 11  VFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLV 70

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F      ++  WN MI G +  +    A+ L+  M   G   +  TI   +KAC   L +
Sbjct: 71  FSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDV 130

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + G ++H+  +K+G++ D+ V + +L +YVKC    DA  +F+DIP  + V+WT +I+G 
Sbjct: 131 RLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGY 190

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           + +G    A+  + ++   G+ PD F+   ++ A + L     G  I   +       + 
Sbjct: 191 ISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV 250

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           FV  SL+DMY KCGN+E A ++F  M  ++ V W+ M+ G A +G  ++ L LF  M++ 
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSE 310

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLM-REKYGIEPEVEHYSFLVDALGRAGRTK 747
            ++PD  T +GVLSAC+  G +        LM R ++   P +   + L+D   + G   
Sbjct: 311 NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVT 368

Query: 748 EAGELILSM 756
           +A E+  +M
Sbjct: 369 QAWEIFTAM 377



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 192/479 (40%), Gaps = 77/479 (16%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   L++ L  D ++   ++     FG    +K +F  ++E ++ LW  M+R       
Sbjct: 35  IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQAY 284
            ++  HL+  +   G  P++ ++  VL                 ++   G  H+  V+  
Sbjct: 95  FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154

Query: 285 AIKLLLYNNN-------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
            + L +  +N              NVV W   ++GY+  G    AI  F  ++   ++ D
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------- 383
           S + +  LAA A   +   G+ I      SG    V V  SL++MY K G +        
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274

Query: 384 -----------------------------------CGLRTDQFTLASVLRASSSLPEGLH 408
                                                L+ D +T+  VL A ++L   L 
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG-ALD 333

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L         +N+ +++  + TALID+Y + GS+ +A  +F      D   WNAM+ G  
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLS 393

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           ++ ++     LFS +   G R DE T    +  C     + +G+Q     MK  F L   
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN-NMKRVFSLTPS 452

Query: 529 VS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +     ++D+  + G + +A  + N++P  P+ V W  ++ GC  + +  LA  +  ++
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 9/270 (3%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D+ LG   H+ ++ +    D F+  +L+++Y +C +   A ++FD +PD++
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW +I+  Y  SG     +  E    F+ L E        +L  +L  C   G   + 
Sbjct: 180 VVSWTAIITGYISSG-----HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E +  Y    G+  + FV+ +L+++Y K G +  A  +F  M E+D+V W  M++ YA N
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNV 297
           G  ++   LF  +    L PD  ++  VL   + LG      +  +A  L+  N   SN 
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL---DLGIWASSLMDRNEFLSNP 351

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           VL    +  Y + G    A E F  M + +
Sbjct: 352 VLGTALIDMYSKCGSVTQAWEIFTAMKKKD 381



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 23/183 (12%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F+  +L+ MY +CG+L  A  +F  MP++D++SW++++  YA +G        +   LF 
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ-----QALDLFF 305

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGY----VWASETVHGYALKIGLVWDEFVSG-----A 199
            ++         T+  +L  C + G     +WAS  +           +EF+S      A
Sbjct: 306 QMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR---------NEFLSNPVLGTA 356

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L+++YSK G + +A  +F  M+++D V+W  M+   + NG  + VF LF  + + G+ PD
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416

Query: 260 DES 262
           + +
Sbjct: 417 ENT 419


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 218/651 (33%), Positives = 341/651 (52%), Gaps = 74/651 (11%)

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
           N G I+   +   S +  D   F   L +     +L  G+Q+H   + SG      + N 
Sbjct: 43  NDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNH 102

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           L+N YSK+G        QF  + VL   S++P    +S  I                  L
Sbjct: 103 LLNFYSKLG--------QFKSSLVL--FSNMPRRNVMSFNI------------------L 134

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I+ Y + G +  A+ LF+     ++ATWNAMI G      + +AL LF  M+  G   DE
Sbjct: 135 INGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDE 194

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+ + ++ C  L  L  G+++HA  +K GFEL   V S +  MY+K G++ D + +   
Sbjct: 195 FTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKS 254

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P    VAW T+I+G   NG  +  L+ Y+ M+++G  PD+ TF  ++ A S L  L QG
Sbjct: 255 MPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQG 314

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +QIHA +IK   SS   V  SL+ MY++ G +ED+   F   +  + VLW++M+     H
Sbjct: 315 QQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFH 374

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G GEE L+LF  M+   +E + VTF+ +L ACS++GL  +  E F LM +KY ++P +EH
Sbjct: 375 GRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEH 434

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD LGRAGR +EA  +I SMP +    + + LL AC++  + E  + ++E+++ L+
Sbjct: 435 YTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLD 494

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFAKVEG---- 841
           P D+++YVLLSNI A+A  W +V+  R  M+ ++V+K+P        +L+     G    
Sbjct: 495 PLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSH 554

Query: 842 ------------LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
                       L+  +K+ GYVP+   VL D++ EEKE  L +HSEK A A+ L++T  
Sbjct: 555 PQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSE 614

Query: 890 SSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +  I                     + N+E +   A+RFHH +DG C C +
Sbjct: 615 NVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGN 665



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 55/348 (15%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S  S +  +L+  I    L  GK  H+ I+ S    D+F++N+L+  YS+ G    +  L
Sbjct: 60  SDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVL 119

Query: 111 FDKMPDRDLISWNSILAAYAHSG----------EGNAENVT----------------EGF 144
           F  MP R+++S+N ++  Y   G          E +  N+                 +  
Sbjct: 120 FSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQAL 179

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LF+ +          TL  +L+ C     + A + VH   LK G      V  +L ++Y
Sbjct: 180 SLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY 239

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            K G + + + L   M  R VV W  ++   A+NG  EEV + +  +  +G  PD  +  
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299

Query: 265 CVLGVISDLG------KRHEEQVQAYA-----------------------IKLLLYNNNS 295
            VL   S+L       + H E ++A A                       IK  +   N 
Sbjct: 300 SVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF 359

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +VVLW+  ++ Y   G    A+E F  M    ++ + VTFL  L A +
Sbjct: 360 DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACS 407



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 193/499 (38%), Gaps = 130/499 (26%)

Query: 155 TFTSRLTLAP-----LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           TFTS +   P     LL+ C+  G ++  + VH   +  G   D+F+S  L+N YSK G+
Sbjct: 53  TFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQ 112

Query: 210 IRE-------------------------------AKFLFDGMQERDVVLWKVMLRAYAEN 238
            +                                A+ LFD M ER++  W  M+    + 
Sbjct: 113 FKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQF 172

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVL----GVISDLGKRHEEQVQAYAIK------- 287
            F ++   LF +++  G  PD+ ++  VL    G+ S L     ++V A  +K       
Sbjct: 173 EFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAG---QEVHACLLKCGFELSS 229

Query: 288 ---------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                L+       VV WN  ++G  Q G     +  +  M  +
Sbjct: 230 VVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMA 289

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
             + D +TF+  L+A +    L  GQQIH   +K+G  S + V +SLI+MYS+ GC+   
Sbjct: 290 GFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCL--- 346

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                                    +  + A  +    D  + +++I  Y  +G   EA 
Sbjct: 347 -------------------------EDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEAL 381

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            LF   +   +   N + F  +L   SH  L+         E  D              L
Sbjct: 382 ELFHQMEDLKMEA-NEVTFLSLLYACSHSGLK-----EKGTEYFD--------------L 421

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMI 565
           M+K+      Y +K   E   CV    +D+  + G + +A+ +   +P  PD + W T++
Sbjct: 422 MVKK------YKLKPRIEHYTCV----VDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 471

Query: 566 SGCVDNGEEDLALSIYHQM 584
           + C  + E ++A  I  ++
Sbjct: 472 AACKLHKEAEMAERISEEI 490



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 17/307 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR       LL G+  HA +L         + ++L  MY + GSL    +L   MP R
Sbjct: 199 SVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIR 258

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            +++WN+++A  A +  G  E V   + +   ++ +     ++T   +L  C     +  
Sbjct: 259 TVVAWNTLIAGKAQN--GCPEEVLNQYNM---MKMAGFRPDKITFVSVLSACSELATLGQ 313

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H   +K G      V  +L+++YS+ G + ++   F   +  DVVLW  M+ AY  
Sbjct: 314 GQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGF 373

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +G GEE   LF  +    +  ++ +   +L   S  G + E+  + + + +  Y      
Sbjct: 374 HGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLK-EKGTEYFDLMVKKYK----- 427

Query: 298 VLWNKKLSGYLQVGD---NHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
                ++  Y  V D     G +E    MIRS  VQ D + +   LAA        + ++
Sbjct: 428 --LKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAER 485

Query: 354 IHGTTLK 360
           I    +K
Sbjct: 486 ISEEIIK 492


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 242/848 (28%), Positives = 397/848 (46%), Gaps = 124/848 (14%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           D  ++  L+ +YS  G   E++ +FD +  +++  W  ++  Y  N   +E  H F++L 
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201

Query: 252 HRSGLCPDDESVQCVLGVISD-----LGKR-HEEQVQAYAIKLLLYNN------------ 293
             +   PD+ +  C++   +      LGK  H   V+   I  L   N            
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN--VQYDSVTFLVALA 340
                        N++ WN  + G+ + G    A   F +++ S   +  D  T +  L 
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG--------------- 385
             +G  N+++G  IHG  +K G    ++V N+LI+MYSK GC+                 
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381

Query: 386 ------------------------------LRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                         +  ++ T+ ++L A     E L L + +H 
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSL-RALHG 440

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           +++++       ++ A I  Y + GS+  AE++F   +   +++WNA+I G+  + +  K
Sbjct: 441 YSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIK 500

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL+ +  M   G   D+ +I + + ACG L +L+ GK++H + +++G E++  V+  +L 
Sbjct: 501 ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLS 560

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y  C      ++ F  +   + V W  M+SG   N   + ALS++ QM   G+ PDE  
Sbjct: 561 LYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIA 620

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A S L+AL  G+++H   +K     D FV  SL+DMYAK G +  +  +F +++
Sbjct: 621 IASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            +    WN M+ G   HG G + ++LFEDMK    +PD  TF+GVL AC + GLVSE   
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLN 740

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
               M+  Y +EPE+EHY+ ++D LGRAGR  EA   I  MP E  A +  +LL +    
Sbjct: 741 YLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITY 800

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----- 830
            D E G+  AEKL+ALE   + +Y+LLSN++A A +WD V   R +MK  +++KD     
Sbjct: 801 VDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSW 860

Query: 831 ------------------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                              +D I      L K+I E GY PD   VL ++EE EK + L 
Sbjct: 861 IELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILK 920

Query: 873 YHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLR 909
            HSEK+A  +G ++T   + +  +K                             RFHH +
Sbjct: 921 GHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFK 980

Query: 910 DGMCPCAD 917
            G+C C D
Sbjct: 981 KGICSCGD 988



 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 167/585 (28%), Positives = 265/585 (45%), Gaps = 92/585 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++      D+ LGKS H   +    I D F+ N ++ +Y +CG L  A  LFDKMP+++
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT--FTSRLTLAPLLKLCLSSGYVW 176
           LISWNS++  ++ +G        E +R FRSL ES         T+  LL +C   G V 
Sbjct: 276 LISWNSLIRGFSENGFW-----LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +HG A+K+GLV +  V  AL+++YSK G + EA  LF  ++ + VV W  M+ AY+
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 237 ENGFGEEVFHLFVDLHRS------------GLCPD--DESVQCVLGVISDLGKRHEEQVQ 282
             GF  E F L   +                L P   +ES    L  +     RH  Q +
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 283 -----------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                             +A  +    N  +V  WN  + G+ Q GD   A++ +  M R
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY-------- 377
             +  D  + +  L A      L  G++IHG  L++G      V  SL+++Y        
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570

Query: 378 -----SKMG---CVC---------------------------GLRTDQFTLASVLRASSS 402
                  MG    VC                           GL  D+  +AS+L A S 
Sbjct: 571 GRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L L K++H  A+KN  + D+FV+ +L+D+Y ++G +  ++ +F   +G ++A+WN 
Sbjct: 631 L-SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNV 689

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-Y 517
           MI G+ +    +KA+ELF  M  S ++ D  T    ++AC    ++ +G     QM   Y
Sbjct: 690 MITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLY 749

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAW 561
            ++   E   CV    +DM  + G + +A +  N++P  PD   W
Sbjct: 750 KLEPELEHYACV----IDMLGRAGRLNEALNFINEMPEEPDAKIW 790



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 177/665 (26%), Positives = 292/665 (43%), Gaps = 89/665 (13%)

Query: 71  LGKSTHARILNSSQIPDRFLTNN-LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           +G+     +  SSQ    F+ N  L+TMYS CG  + +R +FD++ +++L  WN++++ Y
Sbjct: 125 IGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGY 184

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
             +     E   E    F  L     F     T   L+K C     +   ++VHG A+K+
Sbjct: 185 VRN-----ELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GL+ D FV  A++ +Y K G + EA  LFD M E++++ W  ++R ++ENGF  E +  F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299

Query: 249 VDLHRS--GLCPDDESVQCVLGVIS----------------DLGKRHEEQVQAYAIKL-- 288
             L  S  GL PD  ++  +L V S                 LG  HE  V    I +  
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359

Query: 289 ---------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN--VQYDSVTF 335
                    +L+    N +VV WN  +  Y + G      +    M      ++ + VT 
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------- 384
           L  L A      L   + +HG +L+  F    ++ N+ I  Y+K G +            
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 385 --------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQ 412
                                           G+  D F++ S+L A   L   L   K+
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL-LQYGKE 538

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH   ++N    +SFV+ +L+ +Y            FE     +   WNAM+ GY  +  
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 598

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
            ++AL LF  M + G   DEI IA+ + AC  L  L  GK++H +A+K+    D  V+  
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           ++DMY K G +  +Q IFN +   +  +W  MI+G   +G+ + A+ ++  M+ S   PD
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 718

Query: 593 EFTFAILVKASSCLTALEQGRQIHAN---LIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            FTF  +++A      + +G    A    L KL+   + +  +  +DM  + G + +A  
Sbjct: 719 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACV--IDMLGRAGRLNEALN 776

Query: 650 LFKQM 654
              +M
Sbjct: 777 FINEM 781



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 176/391 (45%), Gaps = 47/391 (12%)

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           NG++   +  ++N  G+DLA     +   +     +K +E+       G +LDE+   + 
Sbjct: 85  NGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEI-------GRKLDEMLCVS- 136

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
                                 S F  D  +++ ++ MY  CG  ++++ +F+ +   + 
Sbjct: 137 ----------------------SQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNL 174

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
             W  ++SG V N   D A+  + ++  ++   PD FTF  L+KA +    +  G+ +H 
Sbjct: 175 FQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHG 234

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             +K+    D FVG +++ +Y KCG +++A  LF +M  +N + WN+++ G +++G   E
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294

Query: 678 TLKLFEDM--KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
             + F  +     G+ PD  T + +L  CS  G V       H M  K G+  E+   + 
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV-IHGMAVKLGLVHELMVCNA 353

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG------DTETGKWVAEKLM 789
           L+D   + G   EA  L   +  ++  S + +++GA   +G      D     W+ E+LM
Sbjct: 354 LIDMYSKCGCLSEAAILFRKIENKSVVSWN-SMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            +        V + N+  A  +  ++ S R 
Sbjct: 413 EVNE------VTILNLLPACLEESELLSLRA 437



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 34/314 (10%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            ++L   +  S+LL  ++ H   L  S      + N  +  Y++CGSLV+A  +F  M  
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           + + SWN+++  +A +G+       +    +  +          ++  LL  C   G + 
Sbjct: 480 KSVSSWNAVIGGHAQNGDP-----IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQ 534

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +HG+ L+ GL  + FV+ +L+++Y    K    +  F+ M +++ V W  ML  Y+
Sbjct: 535 YGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYS 594

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNN- 294
           +N    E   LF  +   GL PD+ ++  +LG  S L      ++V  +A+K  L  +N 
Sbjct: 595 QNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF 654

Query: 295 ---------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                        V  WN  ++G+   G  + A+E F +M RS+
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714

Query: 328 VQYDSVTFLVALAA 341
            Q D  TFL  L A
Sbjct: 715 KQPDRFTFLGVLQA 728



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 15/177 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL      S L LGK  H   L +S + D F+  +LM MY++ G L +++R+F+++  +
Sbjct: 623 SILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK 682

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           ++ SWN ++  +   G+GN     +   LF  ++ S     R T   +L+ C  +G V  
Sbjct: 683 EVASWNVMITGFGVHGQGN-----KAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 737

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLW 228
              + ++    Y L+  L  + +    ++++  + G++ EA  F+ +  +E D  +W
Sbjct: 738 GLNYLAQMQTLYKLEPEL--EHY--ACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 206/605 (34%), Positives = 315/605 (52%), Gaps = 78/605 (12%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           L S L A+      L L K++H H   ++ +    +S  LI +Y + GS+ +A+ LF+  
Sbjct: 65  LYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEI 124

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMH----------TSG--------ERLDEIT 494
              DL +WN MI GY       +A +LF  M            SG        E LD   
Sbjct: 125 PQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFR 184

Query: 495 IATAVKACGCLLM--------------LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
           +    ++  C +               L++GK++H Y ++SG ELD  V + +LD+Y KC
Sbjct: 185 MMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKC 244

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G++ +A+ IF+ +   D V+WTTMI  C ++G +    S++  +  SGV P+E+TFA ++
Sbjct: 245 GSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVL 304

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A + L A + G+++H  + ++      F   +LV +Y+KCGN E A  +F QM   + V
Sbjct: 305 NACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLV 364

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W +++VG AQ+G  +  L+ FE +   G +PD +TF+GVLSAC++ GLV    E FH +
Sbjct: 365 SWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSV 424

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +EK+G+    +HY+ ++D L R+GR KEA  +I +MP +    +  +LLG CR+ G+ E 
Sbjct: 425 KEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIEL 484

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
            +  A+ L  LEP + + Y+ LSNI+A A  W + T  R +M  + + K P         
Sbjct: 485 AERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKR 544

Query: 832 -------ADLIFAKVEG-------LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                   D    K+         L K++KE GYV DT+FVL DVEEE+KE+ ++YHSEK
Sbjct: 545 QVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEK 604

Query: 878 LARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCP 914
           LA A+G+IST P + I   K                           +NRFH   DG C 
Sbjct: 605 LAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCS 664

Query: 915 CADNC 919
           C D C
Sbjct: 665 CKDYC 669



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 178/372 (47%), Gaps = 67/372 (18%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           LRH      L LGK  HA    S+ IP   ++N L+ MY++CGSLV A+ LFD++P +DL
Sbjct: 74  LRH----RKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDL 129

Query: 120 ISWNSILAAYAHSGE-----------GNAENVT---------------EGFRLFRSLRES 153
            SWN++++ YA+ G             + +N +               E   LFR ++E+
Sbjct: 130 CSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQEN 189

Query: 154 ITFTSRL-TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
            +    + TL+  L    +   +   + +HGY ++ GL  DE V  AL+++Y K G + E
Sbjct: 190 ESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNE 249

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ +FD M ++D+V W  M+    E+G  +E F LF DL  SG+ P++ +   VL   +D
Sbjct: 250 ARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACAD 309

Query: 273 L-GKRHEEQVQAYAIKL--------------------------LLYNN--NSNVVLWNKK 303
           L  ++  ++V  Y  ++                           ++N     ++V W   
Sbjct: 310 LAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSL 369

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG-------QQIHG 356
           + GY Q G    A++ F +++RS  + D +TF+  L+A      +++G       ++ HG
Sbjct: 370 IVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHG 429

Query: 357 TTLKSGFYSAVI 368
               +  Y+ VI
Sbjct: 430 LVHTADHYACVI 441



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/501 (22%), Positives = 204/501 (40%), Gaps = 98/501 (19%)

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLT------LAPLLKLCLSSGYVWASETVHGY 184
           HS     E + E F     L+E++ +  R+        + L+  CL    +   + VH +
Sbjct: 29  HSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAH 88

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
                 +    +S  L+++Y+K G + +A+ LFD + ++D+  W  M+  YA  G  E+ 
Sbjct: 89  TKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQA 148

Query: 245 FHLFVDL-HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKK 303
             LF ++ HR                                              WN  
Sbjct: 149 RKLFDEMPHRDNFS------------------------------------------WNAV 166

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKS 361
           +SGY+  G    A++ F  M++ N   +   F    ALAA A   +L  G++IHG  ++S
Sbjct: 167 ISGYVSQGWYMEALDLF-RMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRS 225

Query: 362 GFYSAVIVGNSLINMYSKMGCV-------------------------------------- 383
           G     +V  +L+++Y K G +                                      
Sbjct: 226 GLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLF 285

Query: 384 -----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                 G+R +++T A VL A + L     + K++H +  +      SF ++AL+ VY +
Sbjct: 286 RDLMGSGVRPNEYTFAGVLNACADLA-AEQMGKEVHGYMTRVGYDPFSFAASALVHVYSK 344

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G+   A  +F      DL +W ++I GY  +     AL+ F  +  SG + DEIT    
Sbjct: 345 CGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGV 404

Query: 499 VKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-AP 556
           + AC    ++  G +  H+   K G        + ++D+  + G   +A++I +++P  P
Sbjct: 405 LSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKP 464

Query: 557 DDVAWTTMISGCVDNGEEDLA 577
           D   W +++ GC  +G  +LA
Sbjct: 465 DKFLWASLLGGCRIHGNIELA 485



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 39/190 (20%)

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           I++++ +   + +A    + IP P    ++T+I+ C+ +                     
Sbjct: 38  IIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRH--------------------- 76

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
                           LE G+++HA+    +      +   L+ MYAKCG++ DA +LF 
Sbjct: 77  --------------RKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFD 122

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           ++  ++   WN M+ G A  G  E+  KLF++M       D+ ++  V+S     G   E
Sbjct: 123 EIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYME 178

Query: 713 AYENFHLMRE 722
           A + F +M+E
Sbjct: 179 ALDLFRMMQE 188


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 196/551 (35%), Positives = 298/551 (54%), Gaps = 47/551 (8%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H H I++    D  ++  L+++Y + GS+ EA  +F+     D  TW  +I GY   + 
Sbjct: 73  VHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDR 132

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
              AL LF+ M   G   +E T+++ +KA         G Q+H + +K GF+ ++ V S 
Sbjct: 133 PFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 192

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +LD+Y + G M DAQ +F+ + + +DV+W  +I+G       + AL ++  M   G  P 
Sbjct: 193 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPS 252

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            F++A L  A S    LEQG+ +HA +IK       F G +L+DMYAK G+I DA  +F 
Sbjct: 253 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 312

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           ++  R+ V WN++L   AQHG G E +  FE+M+  G+ P+ ++F+ VL+ACS++GL+ E
Sbjct: 313 RLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDE 372

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            +  + LM+ K GI  E  HY  +VD LGRAG    A   I  MP E +A++ +ALL AC
Sbjct: 373 GWHYYELMK-KDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 431

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           R+  +TE G + AE +  L+P D   +V+L NI+A+  +W+D    R +MK   VKK+PA
Sbjct: 432 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 491

Query: 833 -----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                  + I  K E ++ +IKE GYVPDT  V++ V+++E+E 
Sbjct: 492 CSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREV 551

Query: 870 ALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFH 906
            L YHSEK+A A+ L++TPP S I   K                            NRFH
Sbjct: 552 NLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFH 611

Query: 907 HLRDGMCPCAD 917
           H +DG C C D
Sbjct: 612 HFKDGACSCKD 622



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 182/373 (48%), Gaps = 45/373 (12%)

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------ 383
           L  G+ +HG  ++S F   +++ N+L+NMY+K G +                        
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 384 -------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
                               G   ++FTL+SV++A+++   G     Q+H   +K    +
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC-CGHQLHGFCVKCGFDS 185

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           +  V +AL+D+Y R G M +A+ +F+  +  +  +WNA+I G+     + KALELF  M 
Sbjct: 186 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGML 245

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G R    + A+   AC     L+QGK +HAY +KSG +L     + +LDMY K G++ 
Sbjct: 246 REGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 305

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           DA+ IF+ +   D V+W ++++    +G  + A+  + +MR  G+ P+E +F  ++ A S
Sbjct: 306 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACS 365

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWN 663
               L++G   +  + K     + +  +++VD+  + G++  A    ++M +  T  +W 
Sbjct: 366 HSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 425

Query: 664 AMLVGLAQHGNGE 676
           A+L     H N E
Sbjct: 426 ALLNACRMHKNTE 438



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 127/217 (58%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T +K C    +L QG+ +H + ++S F  DL +++ +L+MY KCG++ +A+ +F+ +P  
Sbjct: 56  TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER 115

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V WTT+ISG   +     AL +++QM   G  P+EFT + ++KA++       G Q+H
Sbjct: 116 DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLH 175

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
              +K    S+  VG +L+D+Y + G ++DA ++F  ++ RN V WNA++ G A+    E
Sbjct: 176 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTE 235

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           + L+LF+ M   G  P   ++  +  ACS TG + + 
Sbjct: 236 KALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQG 272



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 148/323 (45%), Gaps = 34/323 (10%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H  ++ S    D  + N L+ MY++CGSL  AR++FDKMP+RD ++W ++++ 
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y+       +   +   LF  +       +  TL+ ++K   +         +HG+ +K 
Sbjct: 127 YSQH-----DRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 181

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   +  V  AL+++Y+++G + +A+ +FD ++ R+ V W  ++  +A     E+   LF
Sbjct: 182 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELF 241

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI----KLLLYNNNS-------- 295
             + R G  P   S   + G  S  G   + + V AY I    KL+ +  N+        
Sbjct: 242 QGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 301

Query: 296 ----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           +VV WN  L+ Y Q G  + A+  F  M R  ++ + ++FL  L
Sbjct: 302 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVL 361

Query: 340 AAVAGTDNLNLGQQIHGTTLKSG 362
            A + +  L+ G   +    K G
Sbjct: 362 TACSHSGLLDEGWHYYELMKKDG 384



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 119/239 (49%), Gaps = 7/239 (2%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L+ F Q   F  S +     S+++ A +      G   H   +      +  + + L+ 
Sbjct: 136 ALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 195

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS-GEGNAENVTEGFRLFRSLRESIT 155
           +Y+R G +  A+ +FD +  R+ +SWN+++A +A   G   A  + +G      LRE   
Sbjct: 196 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGM-----LREGFR 250

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
             S  + A L   C S+G++   + VH Y +K G     F    L+++Y+K G I +A+ 
Sbjct: 251 -PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 309

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +FD + +RDVV W  +L AYA++GFG E    F ++ R G+ P++ S   VL   S  G
Sbjct: 310 IFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSG 368



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/436 (20%), Positives = 166/436 (38%), Gaps = 93/436 (21%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LLK C     +     VHG+ ++     D  ++  L+N+Y+K G + EA+ +FD M ERD
Sbjct: 57  LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH---EEQV 281
            V W  ++  Y+++    +   LF  + R G  P++ ++  V+   +   +R      Q+
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAA--AERRGCCGHQL 174

Query: 282 QAYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDN 313
             + +K             L LY                 + N V WN  ++G+ +    
Sbjct: 175 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGT 234

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+E F  M+R   +    ++     A + T  L  G+ +H   +KSG       GN+L
Sbjct: 235 EKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 294

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++MY+K G +                        H +++I     K D V          
Sbjct: 295 LDMYAKSGSI------------------------HDARKIFDRLAKRDVV---------- 320

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
                                    +WN+++  Y      ++A+  F  M   G R +EI
Sbjct: 321 -------------------------SWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEI 355

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           +  + + AC    +L +G   +    K G  L+      I+D+  + G +  A     ++
Sbjct: 356 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEM 415

Query: 554 P-APDDVAWTTMISGC 568
           P  P    W  +++ C
Sbjct: 416 PIEPTAAIWKALLNAC 431



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 40/240 (16%)

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D   +  L+K  +    L QGR +H +LI+     D  +  +L++MYAKCG++E+A  +F
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA-------- 703
            +M  R+ V W  ++ G +QH    + L LF  M   G  P+  T   V+ A        
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169

Query: 704 --------CSYTGLVSEAYENFHLMR--EKYGIEPEVE------------HYSFLVDALG 741
                   C   G  S  +    L+    +YG+  + +             ++ L+    
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229

Query: 742 RAGRTKEAGELILSM---PFEASASMHRALLGACRVQGDTETGKWV-------AEKLMAL 791
           R   T++A EL   M    F  S   + +L GAC   G  E GKWV        EKL+A 
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 228/783 (29%), Positives = 367/783 (46%), Gaps = 120/783 (15%)

Query: 208  GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            G +  A+ +FD M  +++    ++L AY+ +G      HLF                   
Sbjct: 271  GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF------------------- 311

Query: 268  GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                  L + + N   W   +  +   G    A+  F  M+   
Sbjct: 312  ----------------------LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEG 349

Query: 328  VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------- 379
            V  D VT    L     T        +H   +K G  + V V N+L++ Y K        
Sbjct: 350  VIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAAR 404

Query: 380  ------------------MGCVC-GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                              MGC   GL T    L + +R +      LHL +  H  + ++
Sbjct: 405  RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRS-RS 463

Query: 421  DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
             +V + FV+ +L+D Y +   + +   LF+     D  ++N +I  Y  +  +   L LF
Sbjct: 464  TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 523

Query: 481  SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
              M   G     +  AT +   G L  +  GKQ+HA  +  G   +  + + ++DMY KC
Sbjct: 524  REMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKC 583

Query: 541  GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
            G +  A+S F++      ++WT +I+G V NG+ + AL ++  MR +G+ PD  TF+ ++
Sbjct: 584  GMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSII 643

Query: 601  KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            KASS L  +  GRQ+H+ LI+    S  F G  LVDMYAKCG +++A   F +M  RN++
Sbjct: 644  KASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSI 703

Query: 661  LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
             WNA++   A +G  +  +K+FE M   G  PDSVTF+ VL+ACS+ GL  E  + FHLM
Sbjct: 704  SWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 763

Query: 721  REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
            + +Y I P  EHY+ ++D LGR G   +  ++++ MPF+A   +  ++L +CR+ G+ E 
Sbjct: 764  KHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQEL 823

Query: 781  GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
             +  A+KL  +EP D++ YV+LSNI+A A QW+D    +  M+ + V+K+          
Sbjct: 824  ARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQ 883

Query: 833  ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                           D I  +++ L K + + GY PD    L  V+ E K  +L YHSE+
Sbjct: 884  KIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSER 943

Query: 878  LARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCP 914
            LA A+ L++TP  + I                     + N++ +   + RFHH +DG+C 
Sbjct: 944  LAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCS 1003

Query: 915  CAD 917
            C D
Sbjct: 1004 CGD 1006



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 128/572 (22%), Positives = 234/572 (40%), Gaps = 107/572 (18%)

Query: 84  QIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P +  F  N +++ YS  G L  A+ LF   P R+  +W  ++ A+A +G       +
Sbjct: 282 QMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGR-----TS 336

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           +   LFR++        R+T+  +L L   +       ++H +A+K GL    FV   L+
Sbjct: 337 DALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-----VPSLHPFAIKFGLDTHVFVCNTLL 391

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP--- 258
           + Y K G +  A+ +F  M ++D V +  M+   ++ G   +   LF  + R+G      
Sbjct: 392 DAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPL 451

Query: 259 -------DDESVQCVLGV---------------ISDLGKRHEEQVQAYAIKLLLYNNNSN 296
                         VL V               + D+ +  +E  +   +    YN    
Sbjct: 452 HLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVS---YNVIIA 508

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
              WN+  +  L++         F  M +       + +   L+      ++++G+QIH 
Sbjct: 509 AYAWNQCAATVLRL---------FREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 559

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------------- 383
             +  G  S  ++GN+LI+MYSK G +                                 
Sbjct: 560 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEE 619

Query: 384 ----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      GLR D+ T +S+++ASSSL   + L +Q+H + I++   +  F  + L+
Sbjct: 620 ALQLFSDMRRAGLRPDRATFSSIIKASSSLAM-IGLGRQLHSYLIRSGYKSSVFSGSVLV 678

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D+Y + G + EA   F+     +  +WNA+I  Y     +  A+++F  M   G   D +
Sbjct: 679 DMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSV 738

Query: 494 TIATAVKACG-------CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           T  + + AC        C+      K  H Y++    E   CV    +D   + G     
Sbjct: 739 TFLSVLAACSHNGLADECMKYFHLMK--HQYSISPWKEHYACV----IDTLGRVGCFSQV 792

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           Q +  ++P   D + WT+++  C  +G ++LA
Sbjct: 793 QKMLVEMPFKADPIIWTSILHSCRIHGNQELA 824



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 150/319 (47%), Gaps = 36/319 (11%)

Query: 55  QWFSILRHA-ISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           Q F+ +R A  S   L L + +H+R   S+ + + F+ N+L+  YS+C  L   RRLFD+
Sbjct: 436 QLFAAMRRAGYSRHPLHLLQYSHSRS-RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE 494

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP+RD +S+N I+AAYA +     +      RLFR +++       L  A +L +  S  
Sbjct: 495 MPERDNVSYNVIIAAYAWN-----QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP 549

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            V   + +H   + +GL  ++ +  AL+++YSK G +  AK  F    E+  + W  ++ 
Sbjct: 550 DVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALIT 609

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK----- 287
            Y +NG  EE   LF D+ R+GL PD  +   ++   S L       Q+ +Y I+     
Sbjct: 610 GYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKS 669

Query: 288 ---------------------LLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                L  ++     N + WN  +S Y   G+   AI+ F  M+
Sbjct: 670 SVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGML 729

Query: 325 RSNVQYDSVTFLVALAAVA 343
                 DSVTFL  LAA +
Sbjct: 730 HCGFNPDSVTFLSVLAACS 748


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 242/848 (28%), Positives = 397/848 (46%), Gaps = 124/848 (14%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           D  ++  L+ +YS  G   E++ +FD +  +++  W  ++  Y  N   +E  H F++L 
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201

Query: 252 HRSGLCPDDESVQCVLGVISD-----LGKR-HEEQVQAYAIKLLLYNN------------ 293
             +   PD+ +  C++   +      LGK  H   V+   I  L   N            
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN--VQYDSVTFLVALA 340
                        N++ WN  + G+ + G    A   F +++ S   +  D  T +  L 
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG--------------- 385
             +G  N+++G  IHG  +K G    ++V N+LI+MYSK GC+                 
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381

Query: 386 ------------------------------LRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                         +  ++ T+ ++L A     E L L + +H 
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSL-RALHG 440

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           +++++       ++ A I  Y + GS+  AE++F   +   +++WNA+I G+  + +  K
Sbjct: 441 YSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIK 500

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL+ +  M   G   D+ +I + + ACG L +L+ GK++H + +++G E++  V+  +L 
Sbjct: 501 ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLS 560

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y  C      ++ F  +   + V W  M+SG   N   + ALS++ QM   G+ PDE  
Sbjct: 561 LYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIA 620

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A S L+AL  G+++H   +K     D FV  SL+DMYAK G +  +  +F +++
Sbjct: 621 IASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            +    WN M+ G   HG G + ++LFEDMK    +PD  TF+GVL AC + GLVSE   
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLN 740

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
               M+  Y +EPE+EHY+ ++D LGRAGR  EA   I  MP E  A +  +LL +    
Sbjct: 741 YLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITY 800

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----- 830
            D E G+  AEKL+ALE   + +Y+LLSN++A A +WD V   R +MK  +++KD     
Sbjct: 801 VDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSW 860

Query: 831 ------------------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                              +D I      L K+I E GY PD   VL ++EE EK + L 
Sbjct: 861 IELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILK 920

Query: 873 YHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLR 909
            HSEK+A  +G ++T   + +  +K                             RFHH +
Sbjct: 921 GHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFK 980

Query: 910 DGMCPCAD 917
            G+C C D
Sbjct: 981 KGICSCGD 988



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 167/585 (28%), Positives = 266/585 (45%), Gaps = 92/585 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++      D+ LGKS H   +    I D F+ N ++ +Y +CG L  A  LFDKMP+++
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT--FTSRLTLAPLLKLCLSSGYVW 176
           LISWNS++  ++ +G        E +R FRSL ES         T+  LL +C   G V 
Sbjct: 276 LISWNSLIRGFSENG-----FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +HG A+K+GLV +  V  AL+++YSK G + EA  LF  ++ + VV W  M+ AY+
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 237 ENGFGEEVFHLFVDLHRS------------GLCPD--DESVQCVLGVISDLGKRHEEQVQ 282
             GF  E F L   +                L P   +ES    L  +     RH  Q +
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 283 -----------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                             +A  +    N  +V  WN  + G+ Q GD   A++ +  M R
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY-------- 377
             +  D  + +  L A      L  G++IHG  L++G      V  SL+++Y        
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570

Query: 378 -----SKMG---CVC---------------------------GLRTDQFTLASVLRASSS 402
                 +MG    VC                           GL  D+  +AS+L A S 
Sbjct: 571 GRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L L K++H  A+KN  + D+FV+ +L+D+Y ++G +  ++ +F   +G ++A+WN 
Sbjct: 631 L-SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNV 689

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-Y 517
           MI G+ +    +KA+ELF  M  S ++ D  T    ++AC    ++ +G     QM   Y
Sbjct: 690 MITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLY 749

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAW 561
            ++   E   CV    +DM  + G + +A +  N++P  PD   W
Sbjct: 750 KLEPELEHYACV----IDMLGRAGRLNEALNFINEMPEEPDAKIW 790



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 177/665 (26%), Positives = 292/665 (43%), Gaps = 89/665 (13%)

Query: 71  LGKSTHARILNSSQIPDRFLTNN-LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           +G+     +  SSQ    F+ N  L+TMYS CG  + +R +FD++ +++L  WN++++ Y
Sbjct: 125 IGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGY 184

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
             +     E   E    F  L     F     T   L+K C     +   ++VHG A+K+
Sbjct: 185 VRN-----ELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GL+ D FV  A++ +Y K G + EA  LFD M E++++ W  ++R ++ENGF  E +  F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299

Query: 249 VDLHRS--GLCPDDESVQCVLGVIS----------------DLGKRHEEQVQAYAIKL-- 288
             L  S  GL PD  ++  +L V S                 LG  HE  V    I +  
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359

Query: 289 ---------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN--VQYDSVTF 335
                    +L+    N +VV WN  +  Y + G      +    M      ++ + VT 
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------- 384
           L  L A      L   + +HG +L+  F    ++ N+ I  Y+K G +            
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 385 --------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQ 412
                                           G+  D F++ S+L A   L   L   K+
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL-LQYGKE 538

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH   ++N    +SFV+ +L+ +Y            FE     +   WNAM+ GY  +  
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNEL 598

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
            ++AL LF  M + G   DEI IA+ + AC  L  L  GK++H +A+K+    D  V+  
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           ++DMY K G +  +Q IFN +   +  +W  MI+G   +G+ + A+ ++  M+ S   PD
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 718

Query: 593 EFTFAILVKASSCLTALEQGRQIHAN---LIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            FTF  +++A      + +G    A    L KL+   + +  +  +DM  + G + +A  
Sbjct: 719 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACV--IDMLGRAGRLNEALN 776

Query: 650 LFKQM 654
              +M
Sbjct: 777 FINEM 781



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 176/391 (45%), Gaps = 47/391 (12%)

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           NG++   +  ++N  G+DLA     +   +     +K +E+       G +LDE+   + 
Sbjct: 85  NGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEI-------GRKLDEMLCVS- 136

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
                                 S F  D  +++ ++ MY  CG  ++++ +F+ +   + 
Sbjct: 137 ----------------------SQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNL 174

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
             W  ++SG V N   D A+  + ++  ++   PD FTF  L+KA +    +  G+ +H 
Sbjct: 175 FQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHG 234

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             +K+    D FVG +++ +Y KCG +++A  LF +M  +N + WN+++ G +++G   E
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294

Query: 678 TLKLFEDM--KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
             + F  +     G+ PD  T + +L  CS  G V       H M  K G+  E+   + 
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV-IHGMAVKLGLVHELMVCNA 353

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG------DTETGKWVAEKLM 789
           L+D   + G   EA  L   +  ++  S + +++GA   +G      D     W+ E+LM
Sbjct: 354 LIDMYSKCGCLSEAAILFRKIENKSVVSWN-SMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            +        V + N+  A  +  ++ S R 
Sbjct: 413 EVNE------VTILNLLPACLEESELLSLRA 437



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 34/314 (10%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            ++L   +  S+LL  ++ H   L  S      + N  +  Y++CGSLV+A  +F  M  
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           + + SWN+++  +A +G+       +    +  +          ++  LL  C   G + 
Sbjct: 480 KSVSSWNAVIGGHAQNGDP-----IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQ 534

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +HG+ L+ GL  + FV+ +L+++Y    K    +  F+ M +++ V W  ML  Y+
Sbjct: 535 YGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYS 594

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNN- 294
           +N    E   LF  +   GL PD+ ++  +LG  S L      ++V  +A+K  L  +N 
Sbjct: 595 QNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF 654

Query: 295 ---------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                        V  WN  ++G+   G  + A+E F +M RS+
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714

Query: 328 VQYDSVTFLVALAA 341
            Q D  TFL  L A
Sbjct: 715 KQPDRFTFLGVLQA 728



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 15/177 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL      S L LGK  H   L +S + D F+  +LM MY++ G L +++R+F+++  +
Sbjct: 623 SILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK 682

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           ++ SWN ++  +   G+GN     +   LF  ++ S     R T   +L+ C  +G V  
Sbjct: 683 EVASWNVMITGFGVHGQGN-----KAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 737

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLW 228
              + ++    Y L+  L  + +    ++++  + G++ EA  F+ +  +E D  +W
Sbjct: 738 GLNYLAQMQTLYKLEPEL--EHY--ACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 350/713 (49%), Gaps = 91/713 (12%)

Query: 294  NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            N  V LWN  +S Y ++G+   ++  F  M +  V  +  TF   L   A    +   ++
Sbjct: 432  NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491

Query: 354  IHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CVC--- 384
            +HG  LK GF S   V NSLI  Y K G                          CV    
Sbjct: 492  VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551

Query: 385  --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                          G+  D  TL SVL A +++   L L + +H   +K     +   S 
Sbjct: 552  SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGN-LSLGRALHGFGVKACFSEEVVFSN 610

Query: 431  ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
             L+D+Y + G++  A  +F       + +W + I  Y+       A+ LF  M + G R 
Sbjct: 611  TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 491  DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
            D  T+ + V AC C   L +G+ +H+Y +K+G   +L V++ +++MY KCG++ +A+ +F
Sbjct: 671  DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 730

Query: 551  NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
            + IP  D V+W TMI G   N   + AL ++  M+     PD+ T A ++ A + L AL+
Sbjct: 731  SKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALD 789

Query: 611  QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            +GR+IH ++++    SD  V  +LVDMYAKCG +  A +LF  +  ++ + W  M+ G  
Sbjct: 790  KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 849

Query: 671  QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
             HG G E +  F +M+  G+EPD  +F  +L+ACS++GL++E ++ F+ MR + G+EP++
Sbjct: 850  MHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKL 909

Query: 731  EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
            EHY+ +VD L R G   +A + I SMP +   ++   LL  CR+  D +  + VAE +  
Sbjct: 910  EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE 969

Query: 791  LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------- 831
            LEP ++  YV+L+N++A A +W++V   R  M+++  K++P                   
Sbjct: 970  LEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNS 1029

Query: 832  ----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                A  I   +  L  +++   Y     +VL++ ++ EKE     HSEK A A+G+++ 
Sbjct: 1030 KHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNL 1089

Query: 888  PPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            PP   +  +K                           +NRFHH +DG+C C D
Sbjct: 1090 PPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 265/612 (43%), Gaps = 89/612 (14%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + + S+L+       L  GK  H+ I+++    D  L   L+ MY  CG LV  R++FDK
Sbjct: 370 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           + +  +  WN +++ YA  G     N  E   LF+ +++     +  T   +LK   + G
Sbjct: 430 IMNDKVFLWNLLMSEYAKIG-----NFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 484

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            V   + VHGY LK+G   +  V  +L+  Y KFG +  A  LFD + E DVV W  M+ 
Sbjct: 485 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMIN 544

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK------RHEEQVQAYAIK 287
               NGF      +F+ +   G+  D  ++  VL   +++G        H   V+A   +
Sbjct: 545 GCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSE 604

Query: 288 LLLYNN-----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            ++++N                       ++ +V W   ++ Y++ G    AI  F  M 
Sbjct: 605 EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQ 664

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
              V+ D  T    + A A + +L+ G+ +H   +K+G  S + V N+LINMY+K G V 
Sbjct: 665 SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVE 724

Query: 385 GLR------------------------------------------TDQFTLASVLRASSS 402
             R                                           D  T+A VL A + 
Sbjct: 725 EARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAG 784

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L   ++IH H ++    +D  V+ AL+D+Y + G +  A+ LF+     DL +W  
Sbjct: 785 LA-ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 843

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKS 521
           MI GY +    ++A+  F+ M  +G   DE + +  + AC    +L +G K  ++   + 
Sbjct: 844 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNEC 903

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
           G E  L   + ++D+  + G +  A      +P  PD   W  ++SGC           I
Sbjct: 904 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC----------RI 953

Query: 581 YHQMRLSGVVPD 592
           +H ++L+  V +
Sbjct: 954 HHDVKLAEKVAE 965



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 3/296 (1%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           NA I  +    +   A+EL +   +    L+  +  + ++ C     L+ GK++H+  + 
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 397

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +G  +D  + + ++ MYV CG +V  + IF+ I       W  ++S     G    ++S+
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           + +M+  GVV + +TF  ++K  + L  +++ +++H  ++KL   S+  V  SL+  Y K
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
            G +E A+ LF ++   + V WN+M+ G   +G     L++F  M   GVE D  T + V
Sbjct: 518 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 577

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           L A +  G +S      H    K     EV   + L+D   + G    A E+ + M
Sbjct: 578 LVAWANIGNLSLG-RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 198/579 (34%), Positives = 321/579 (55%), Gaps = 47/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   + FT+  VL+A +   + + L  +IH   +K     D FV T+L+ +Y +  +  +
Sbjct: 109 GFLPNNFTIPFVLKACARKLD-VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDD 167

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F++    ++ +W A+I GYI S +  +A+  F  +   G + D  ++   + AC  
Sbjct: 168 ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACAR 227

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L     G+ +  Y   SG   ++ V++ +LDMYVKCG +  A  IF+ +P  D V+W+TM
Sbjct: 228 LGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTM 287

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   NG    AL ++ QM+   + PD +T   ++ A + L AL+ G    + + + + 
Sbjct: 288 IQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEF 347

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            S+P +G +L+DMY+KCG++  A+ +F  M  ++ V+WNAM+VGL+ +G+ +    LF  
Sbjct: 348 LSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSL 407

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           ++ HG+ PD  TFIG+L  C++ G V+E  + F+ M+  + + P +EHY  +VD LGRAG
Sbjct: 408 VEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAG 467

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA +LI +MP + +A +  ALLG C++  DT   + V +KL+ LEP++S  YV LSN
Sbjct: 468 LLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSN 527

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I++  ++W++    R  MK + ++K  A                       + I+AK++ 
Sbjct: 528 IYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDE 587

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------- 893
           L + +K  G+VP T+FVL D+EEEEKE  L YHSEKLA A+GLI++PP+ VI        
Sbjct: 588 LGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRV 647

Query: 894 -------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                        ++ +E +    NRFH   DG C C D
Sbjct: 648 CGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRD 686



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 392 TLASVLRASSSLPEGLHLSKQI-HVHA--IKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
             +  L   + L  GL+   Q+ H+HA  ++     D+++   ++      GS   ++ +
Sbjct: 11  VFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLV 70

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F      ++  WN MI G +  +    A+ L+  M   G   +  TI   +KAC   L +
Sbjct: 71  FSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDV 130

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + G ++H+  +K+G++ D+ V + +L +YVKC    DA  +F+DIP  + V+WT +I+G 
Sbjct: 131 RLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGY 190

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           + +G    A+  + ++   G+ PD F+   ++ A + L     G  I   +       + 
Sbjct: 191 ISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV 250

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           FV  SL+DMY KCGN+E A ++F  M  ++ V W+ M+ G A +G  ++ L LF  M++ 
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSE 310

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLM-REKYGIEPEVEHYSFLVDALGRAGRTK 747
            ++PD  T +GVLSAC+  G +        LM R ++   P +   + L+D   + G   
Sbjct: 311 NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVT 368

Query: 748 EAGELILSM 756
           +A E+  +M
Sbjct: 369 QAWEIFTAM 377



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 192/479 (40%), Gaps = 77/479 (16%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   L++ L  D ++   ++     FG    +K +F  ++E ++ LW  M+R       
Sbjct: 35  IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQAY 284
            ++  HL+  +   G  P++ ++  VL                 ++   G  H+  V+  
Sbjct: 95  FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154

Query: 285 AIKLLLYNNN-------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
            + L +  +N              NVV W   ++GY+  G    AI  F  ++   ++ D
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------- 383
           S + +  LAA A   +   G+ I      SG    V V  SL++MY K G +        
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274

Query: 384 -----------------------------------CGLRTDQFTLASVLRASSSLPEGLH 408
                                                L+ D +T+  VL A ++L   L 
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG-ALD 333

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L         +N+ +++  + TALID+Y + GS+ +A  +F      D   WNAM+ G  
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLS 393

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           ++ ++     LFS +   G R DE T    +  C     + +G+Q     MK  F L   
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN-NMKRVFSLTPS 452

Query: 529 VS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +     ++D+  + G + +A  + N++P  P+ V W  ++ GC  + +  LA  +  ++
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 9/270 (3%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D+ LG   H+ ++ +    D F+  +L+++Y +C +   A ++FD +PD++
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW +I+  Y  SG     +  E    F+ L E        +L  +L  C   G   + 
Sbjct: 180 VVSWTAIITGYISSG-----HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E +  Y    G+  + FV+ +L+++Y K G +  A  +F  M E+D+V W  M++ YA N
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNV 297
           G  ++   LF  +    L PD  ++  VL   + LG      +  +A  L+  N   SN 
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL---DLGIWASSLMDRNEFLSNP 351

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           VL    +  Y + G    A E F  M R +
Sbjct: 352 VLGTALIDMYSKCGSVTQAWEIFTAMKRKD 381



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 145/340 (42%), Gaps = 34/340 (10%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HAR+L      D +L N ++      GS  Y++ +F ++ + ++  WN+++      
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI-----R 87

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  + +   +   L+ S+R      +  T+  +LK C     V     +H   +K G   
Sbjct: 88  GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDH 147

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D FV  +L+++Y K     +A  +FD + +++VV W  ++  Y  +G   E    F  L 
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLL 207

Query: 253 RSGLCPDDESVQCVLGVISDLGK-RHEEQVQAY------------AIKLL-LYNNNSN-- 296
             GL PD  S+  VL   + LG     E +  Y            A  LL +Y    N  
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLE 267

Query: 297 -------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                        +V W+  + GY   G    A++ F  M   N++ D  T +  L+A A
Sbjct: 268 RANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACA 327

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
               L+LG        ++ F S  ++G +LI+MYSK G V
Sbjct: 328 TLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 23/183 (12%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F+  +L+ MY +CG+L  A  +F  MP++D++SW++++  YA +G        +   LF 
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ-----QALDLFF 305

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGY----VWASETVHGYALKIGLVWDEFVSG-----A 199
            ++         T+  +L  C + G     +WAS  +           +EF+S      A
Sbjct: 306 QMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR---------NEFLSNPVLGTA 356

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L+++YSK G + +A  +F  M+ +D V+W  M+   + NG  + VF LF  + + G+ PD
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416

Query: 260 DES 262
           + +
Sbjct: 417 ENT 419


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 248/894 (27%), Positives = 434/894 (48%), Gaps = 101/894 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H+ I+      D +L+NNL+ +Y++C  +  AR LFD+MP RD++SW ++L+A+  
Sbjct: 35  GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTR 94

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     ++  E  +LF  +  S    +  TL+  L+ C + G       +H   +K+GL 
Sbjct: 95  N-----KHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLE 149

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  +   LV++Y+K     E   L   +++ DVV W  M+ +  E     E   L+V +
Sbjct: 150 LNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKM 209

Query: 252 HRSGLCPDDESVQCVLGVIS--DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
             +G+ P++ +   +LG+ S   LGK + + + +   +L+ +    N++L    +  Y +
Sbjct: 210 IEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHS---QLITFGVEMNLMLKTAIICMYAK 266

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 AI+    + +   +YD   +                     T++ SGF     V
Sbjct: 267 CRRMEDAIK----VSQQTPKYDVCLW---------------------TSIISGFVQNSQV 301

Query: 370 G---NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
               N+L++M      + G+  + FT AS+L ASSS+   L L +Q H   I      D 
Sbjct: 302 REAVNALVDME-----LSGILPNNFTYASLLNASSSVLS-LELGEQFHSRVIMVGLEGDI 355

Query: 427 FVSTALIDVYCR-NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
           +V  AL+D+Y + + +       F      ++ +W ++I G+       ++++LF+ M  
Sbjct: 356 YVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQA 415

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
           +G + +  T++T + AC  +  + Q K++H Y +K+  ++D+ V + ++D Y   G   +
Sbjct: 416 AGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADE 475

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A S+   +   D + +TT+ +     G+ ++AL +   M    V  DEF+ A  + A++ 
Sbjct: 476 AWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAG 535

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L  +E G+Q+H    K        V  SLV  Y+KCG++ DAY +FK +   + V WN +
Sbjct: 536 LGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGL 595

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + GLA +G   + L  F+DM+  GV+PDSVTF+ ++ ACS   L+++  + F+ M + Y 
Sbjct: 596 ISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYH 655

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I P+++HY  LVD LGR GR +EA  +I +MPF+  + +++ LL AC + G+   G+ +A
Sbjct: 656 ITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMA 715

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------- 832
            + + L+P D + Y+LL++++  A   D     R  M+ + +++ P              
Sbjct: 716 RRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLF 775

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                   D I  K+E LI  IK  GY             +E E  L YHSE+LA A+G+
Sbjct: 776 SAREKIGNDEINEKLESLITEIKNRGY-----------PYQESEDKL-YHSEQLALAFGV 823

Query: 885 ISTPPSSVILSNKEPLYAN-----------------------RFHHLRDGMCPC 915
           +S P  + I  NK  L                          RFH  +DG C C
Sbjct: 824 LSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/606 (21%), Positives = 260/606 (42%), Gaps = 98/606 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S LR   +  +   G   HA ++      +  L   L+ +Y++C   V   +L   + D 
Sbjct: 122 SALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDG 181

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK----LCLSSG 173
           D++SW +++++   + +      +E  +L+  + E+  + +  T   LL     L L  G
Sbjct: 182 DVVSWTTMISSLVETSKW-----SEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKG 236

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
           Y    + +H   +  G+  +  +  A++ +Y+K  ++ +A  +     + DV LW  ++ 
Sbjct: 237 Y---GKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIIS 293

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKL 288
            + +N    E  +  VD+  SG+ P++ +   +L   S     +LG++   +V    ++ 
Sbjct: 294 GFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEG 353

Query: 289 LLYNNNS-------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            +Y  N+                         NV+ W   ++G+ + G    +++ F  M
Sbjct: 354 DIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEM 413

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-- 381
             + VQ +S T    L A +   ++   +++HG  +K+     + VGN+L++ Y+  G  
Sbjct: 414 QAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMA 473

Query: 382 -----------------------------------------CVCGLRTDQFTLASVLRAS 400
                                                    C   ++ D+F+LAS + A+
Sbjct: 474 DEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAA 533

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           + L   +   KQ+H ++ K+     + VS +L+  Y + GSM +A  +F++    D  +W
Sbjct: 534 AGLGI-METGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSW 592

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N +I G   +     AL  F  M  +G + D +T  + + AC    +L QG   + Y+M+
Sbjct: 593 NGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLD-YFYSME 651

Query: 521 SGF----ELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGE-- 573
             +    +LD  V   ++D+  + G + +A  +   +P  PD V + T+++ C  +G   
Sbjct: 652 KTYHITPKLDHYVC--LVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVP 709

Query: 574 --EDLA 577
             ED+A
Sbjct: 710 LGEDMA 715



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 129/250 (51%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           LK+G  +H+  +K G + DL +S+ +L +Y KC  +  A+ +F+++P  D V+WTT++S 
Sbjct: 32  LKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSA 91

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              N     AL ++  M  SG  P+EFT +  +++ S L   E G +IHA+++KL    +
Sbjct: 92  HTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELN 151

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +G +LVD+Y KC    + + L   +   + V W  M+  L +     E L+L+  M  
Sbjct: 152 HVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIE 211

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G+ P+  TF+ +L   S+ GL     +  H     +G+E  +   + ++    +  R +
Sbjct: 212 AGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRME 271

Query: 748 EAGELILSMP 757
           +A ++    P
Sbjct: 272 DAIKVSQQTP 281


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  355 bits (910), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 227/770 (29%), Positives = 372/770 (48%), Gaps = 116/770 (15%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+   L+  Y+K G++  A+ +FD M + ++     +L A A                 S
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAH----------------S 92

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
            L PD E                         +L       + V +N  ++G+   G   
Sbjct: 93  RLVPDME-------------------------RLFASMPERDAVSYNALITGFSSTGSPA 127

Query: 315 GAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            +++ +  ++R  +V+   +T    +   +   +  LG  +H   L+ GF +   VG+ L
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++MY+KM    GL  D   +   + A +                +  +T+    +   +I
Sbjct: 188 VDMYAKM----GLIRDARRVFQEMEAKT---------------VVMYNTLITGLLRCKMI 228

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           +         +A+ LF+     D  TW  M+ G   +    +AL++F  M   G  +D+ 
Sbjct: 229 E---------DAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T  + + ACG L  L++GKQ+HAY  ++ +E ++ V S ++DMY KC ++  A+++F  +
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              + ++WT MI G   N   + A+  + +M++ G+ PD+FT   ++ + + L +LE+G 
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q H   +         V  +LV +Y KCG+IEDA+ LF +M   + V W A++ G AQ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +ET+ LFE M A+G++PD VTFIGVLSACS  GLV +  + F  M++ +GI P  +HY
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + ++D   R+GR KEA E I  MP    A     LL +CR++G+ E GKW AE L+  +P
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDP 579

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------------- 831
            + ++YVLL ++ AA  QW +V   R  M+ + VKK+P                      
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 639

Query: 832 -ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP-- 888
            +  I+ K+E L  ++ E GY PD   VL DV + +K   + +HSEKLA A+GLI  P  
Sbjct: 640 FSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQE 699

Query: 889 -PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            P  ++                  ++ ++ L   A RFH   DG C C D
Sbjct: 700 MPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGD 749



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 129/595 (21%), Positives = 220/595 (36%), Gaps = 151/595 (25%)

Query: 74  STHARILNSS-QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           + H  IL +  Q P  FL N+L+T Y++ G L  ARR+FD+MPD +L + N++L+A AHS
Sbjct: 33  AVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHS 92

Query: 133 --------------------------GEGNAENVTEGFRLFRS-LRESITFTSRLTLAPL 165
                                     G  +  +     +L+R+ LRE     +R+TL+ +
Sbjct: 93  RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ---- 221
           + +  +        +VH   L++G     FV   LV++Y+K G IR+A+ +F  M+    
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 222 ---------------------------ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
                                      +RD + W  M+    +NG   E   +F  +   
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272

Query: 255 GLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN------------------- 294
           G+  D  +   +L     L    E +Q+ AY I    Y +N                   
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAY-ITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 295 ----------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                      N++ W   + GY Q   +  A+  F  M    ++ D  T    +++ A 
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
             +L  G Q H   L SG    + V N+L+ +Y K G                    S+ 
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG--------------------SIE 431

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           +   L  ++  H        D    TAL+  Y + G   E                    
Sbjct: 432 DAHRLFDEMSFH--------DQVSWTALVTGYAQFGKAKE-------------------- 463

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GF 523
                       ++LF  M  +G + D +T    + AC    ++++G        K  G 
Sbjct: 464 -----------TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI 512

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                  + ++D+Y + G   +A+     +P +PD   W T++S C   G  ++ 
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    + + L  GK  HA I  +    + F+ + L+ MYS+C S+  A  +F +M  R
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ISW +++  Y     G      E  R F  ++         TL  ++  C +   +  
Sbjct: 343 NIISWTAMIVGY-----GQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE 397

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
               H  AL  GL+    VS ALV +Y K G I +A  LFD M   D V W  ++  YA+
Sbjct: 398 GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ 457

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            G  +E   LF  +  +GL PD  +   VL   S  G
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 19/183 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    + + L  G   H   L S  +    ++N L+T+Y +CGS+  A RLFD+M   
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
           D +SW +++  YA  G+       E   LF  +  +      +T   +L  C  +G    
Sbjct: 444 DQVSWTALVTGYAQFGKAK-----ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEK 498

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWK 229
              Y  + +  HG    I  + D +    ++++YS+ G+ +EA+     M    D   W 
Sbjct: 499 GCDYFDSMQKDHG----IVPIDDHYT--CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552

Query: 230 VML 232
            +L
Sbjct: 553 TLL 555


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 230/723 (31%), Positives = 348/723 (48%), Gaps = 119/723 (16%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL       N + +   + GY +      AIE FV + R   + +   F   L  +  
Sbjct: 92  ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVS 151

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
            D   LG  IH    K G  S   VG +LI+ YS  G V                     
Sbjct: 152 MDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGM 211

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G + + FT ASV +A   L E   + K +H  A+K+ 
Sbjct: 212 VTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL-EAFDVGKSVHGCALKSR 270

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D +V  AL+D+Y ++G + +A   FE     D+  W+ MI  Y  S+ S +A+E+F 
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M  +    ++ T A+ ++AC  +  L  G Q+H + +K G   D+ VS+ ++D+Y KCG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 542 AMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
            M ++  +F + P  +DV  W T+I G V  G+ + AL ++  M    V   E T++  +
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 450

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
           +A + L ALE G QIH+  +K     D  V  +L+DMYAKCG+I+DA ++F  M+ ++ V
Sbjct: 451 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 510

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WNAM+ G + HG                             AC+  GL+ +    F  M
Sbjct: 511 SWNAMISGYSMHG----------------------------LACANAGLLDQGQAYFTSM 542

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
            + +GIEP +EHY+ +V  LGR G   +A +LI  +PF+ S  + RALLGAC +  D E 
Sbjct: 543 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIEL 602

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
           G+  A+ ++ +EP D + +VLLSN++A A +WD+V S R  MKRK VKK+P         
Sbjct: 603 GRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQG 662

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                           +I   +E L  + K+ GY+P+ + VLLDVE+EEKER L+ HSE+
Sbjct: 663 TVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSER 722

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCP 914
           LA ++G+I TP  S I                     +  +E +    NRFHH ++G+C 
Sbjct: 723 LALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCS 782

Query: 915 CAD 917
           C D
Sbjct: 783 CGD 785



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 167/668 (25%), Positives = 275/668 (41%), Gaps = 115/668 (17%)

Query: 46  HFSSSSSSSQWFS-ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           H S S  +S  ++  L+  I   +   GK  H  IL      D F  N L+ MY +   L
Sbjct: 30  HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
             A +LFD+MP+R+ IS+ +++  YA S         E   LF  L       +      
Sbjct: 90  CDASKLFDEMPERNTISFVTLIQGYAES-----VRFLEAIELFVRLHREGHELNPFVFTT 144

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +LKL +S         +H    K+G   + FV  AL++ YS  G++  A+ +FDG+  +D
Sbjct: 145 ILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKD 204

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV----LGVIS-DLGK---- 275
           +V W  M+  +AEN   +E   LF  +   G  P++ +   V    LG+ + D+GK    
Sbjct: 205 MVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHG 264

Query: 276 -----RHEEQVQAYAIKLLLYNNN---------------SNVVLWNKKLSGYLQVGDNHG 315
                R+E  +      L LY  +                +V+ W+  ++ Y Q   +  
Sbjct: 265 CALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKE 324

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+E F  M ++ V  +  TF   L A A  + LNLG QIH   +K G +S V V N+L++
Sbjct: 325 AVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 384

Query: 376 MYSKMG-----------------------CVCG---------------------LRTDQF 391
           +Y+K G                        + G                     ++  + 
Sbjct: 385 VYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 444

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T +S LRA +SL   L    QIH   +K     D  V+ ALID+Y + GS+ +A  +F+ 
Sbjct: 445 TYSSALRACASLA-ALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDL 503

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
            +  D  +WNAMI GY               MH                AC    +L QG
Sbjct: 504 MNKQDEVSWNAMISGY--------------SMHG--------------LACANAGLLDQG 535

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            Q +  +M     ++ C+      +++  + G +  A  + ++IP  P  + W  ++  C
Sbjct: 536 -QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 594

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V + + +L   I  Q  L     D+ T  +L    +     +    +  N+ +     +P
Sbjct: 595 VIHNDIELG-RISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEP 653

Query: 629 FVGISLVD 636
             G+S ++
Sbjct: 654 --GLSWIE 659



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 175/348 (50%), Gaps = 3/348 (0%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H   +K     D F    L+++Y ++  + +A  LF+     +  ++  +I GY  S
Sbjct: 58  KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +A+ELF  +H  G  L+     T +K    +   + G  +HA   K G E +  V 
Sbjct: 118 VRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVG 177

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++D Y  CG +  A+ +F+ I   D V+WT M++   +N     AL ++ QMR+ G  
Sbjct: 178 TALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P+ FTFA + KA   L A + G+ +H   +K     D +VG++L+D+Y K G+I+DA   
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXA 297

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SYTGL 709
           F+++  ++ + W+ M+   AQ    +E +++F  M+   V P+  TF  VL AC +  GL
Sbjct: 298 FEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
                 + H++  K G+  +V   + L+D   + GR + +  L    P
Sbjct: 358 NLGNQIHCHVI--KIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESP 403



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 114/221 (51%)

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
           H S    +    A A++ C       +GK +H   +K G  LDL   + +L+MYVK   +
Sbjct: 30  HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA  +F+++P  + +++ T+I G  ++     A+ ++ ++   G   + F F  ++K  
Sbjct: 90  CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLL 149

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
             +   E G  IHA + KL   S+ FVG +L+D Y+ CG ++ A  +F  +  ++ V W 
Sbjct: 150 VSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWT 209

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            M+   A++   +E LKLF  M+  G +P++ TF  V  AC
Sbjct: 210 GMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKAC 250



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 6/219 (2%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  +L  F Q        ++  + S+ +  +      +GKS H   L S    D ++   
Sbjct: 221 FKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVA 280

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ +Y++ G +  AR  F+++P +D+I W+ ++A YA S +       E   +F  +R++
Sbjct: 281 LLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSK-----EAVEMFFQMRQA 335

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
           +   ++ T A +L+ C +   +     +H + +KIGL  D FVS AL+++Y+K G++  +
Sbjct: 336 LVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENS 395

Query: 214 KFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDL 251
             LF     R DV  W  ++  + + G GE+   LF+++
Sbjct: 396 MXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNM 434



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  FL    +   ++   + S LR   S + L  G   H+  + ++   D  +TN L+ 
Sbjct: 427 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALID 486

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE--GNAENVTEGFRLFRSL 150
           MY++CGS+  AR +FD M  +D +SWN++++ Y+  G    NA  + +G   F S+
Sbjct: 487 MYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQGQAYFTSM 542


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 206/612 (33%), Positives = 323/612 (52%), Gaps = 82/612 (13%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM-- 442
           G+R  + T++ V+  +S+L +   L +Q+H   ++    A +F  + L+D+Y + G +  
Sbjct: 140 GVRPSRITMSGVVMVASALGD-RALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGD 198

Query: 443 -----------------------------AEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                                        AEA  LFE  +  D  TW  M+ G   +   
Sbjct: 199 ARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLE 258

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            +AL++F  M   G  +D+ T  + + ACG L  L++GKQ+HAY  ++ +E ++ V S +
Sbjct: 259 SEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSAL 318

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +DMY KC ++  A+++F  +   + ++WT MI G   NG  + A+ ++ +M+  G+ PD+
Sbjct: 319 VDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--LVDMYAKCGNIEDAYILF 651
           FT   ++ + + L +LE+G Q H   + L     P+V +S  LV +Y KCG+IEDA+ LF
Sbjct: 379 FTLGSVISSCANLASLEEGAQFHC--LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLF 436

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   + V W A+++G AQ G  +ET+ LFE M + GV+PD VTFIGVLSACS +GLV 
Sbjct: 437 DEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVD 496

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           +    FH M++ + I P  +HY+ ++D   R+G  K+A E I  MP    A     LL A
Sbjct: 497 KGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR++GD E GKW AE L+ L+P + ++YVLL ++ A+  +W+DV   R  M+ + VKK+P
Sbjct: 557 CRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEP 616

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  +  I+ K++ L  ++ E GY PD   VL DV + EK 
Sbjct: 617 GCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKV 676

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
             L +HSEKLA A+GLI  PP   I                     ++ ++ L   A RF
Sbjct: 677 HMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRF 736

Query: 906 HHLRDGMCPCAD 917
           H   +G+C C D
Sbjct: 737 HKFSNGICSCGD 748



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 186/383 (48%), Gaps = 34/383 (8%)

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM--HTSGE 488
           +L+    R G + + E LF +    D  ++NA++ G+  +    +A   +  +    +G 
Sbjct: 82  SLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGV 141

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           R   IT++  V     L     G+Q+H   ++ GF       S ++DMY K G + DA+ 
Sbjct: 142 RPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARR 201

Query: 549 IFND-------------------------------IPAPDDVAWTTMISGCVDNGEEDLA 577
           +F++                               I   D + WTTM++G   NG E  A
Sbjct: 202 VFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEA 261

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L ++ +MR  GV  D++TF  ++ A   L ALE+G+QIHA + +     + FVG +LVDM
Sbjct: 262 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDM 321

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KC ++  A  +F++M  +N + W AM+VG  Q+G GEE +++F +M+  G++PD  T 
Sbjct: 322 YSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTL 381

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
             V+S+C+    + E  + FH +    G+ P V   + LV   G+ G  ++A  L   M 
Sbjct: 382 GSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS 440

Query: 758 FEASASMHRALLGACRVQGDTET 780
           F    S    ++G  +     ET
Sbjct: 441 FHDQVSWTALVMGYAQFGKAKET 463



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 229/476 (48%), Gaps = 27/476 (5%)

Query: 195 FVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
            V+G +L++  ++ G +R+ + LF  + +RD V +  +L  ++  G        +V L R
Sbjct: 77  LVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLR 136

Query: 254 --SGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
             +G+ P   ++  V+ V S LG R    QV    ++L      +     +  +  Y +V
Sbjct: 137 DEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRL---GFGAYAFTGSPLVDMYAKV 193

Query: 311 GDNHGAIECFVNMIRSNVQY--DSVTFLVALAAVAGT----DNLNLGQQIHGTTLKSGFY 364
           G    A   F  M   NV      +T L+    VA      + +     I  TT+ +G  
Sbjct: 194 GPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLT 253

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
              +   +L +++ +M    G+  DQ+T  S+L A  +L   L   KQIH +  +     
Sbjct: 254 QNGLESEAL-DVFRRMRAE-GVGIDQYTFGSILTACGALA-ALEEGKQIHAYITRTCYED 310

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           + FV +AL+D+Y +  S+  AE +F      ++ +W AMI GY  +    +A+ +FS M 
Sbjct: 311 NVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 370

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G + D+ T+ + + +C  L  L++G Q H  A+ SG    + VS+ ++ +Y KCG++ 
Sbjct: 371 RDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           DA  +F+++   D V+WT ++ G    G+    + ++ +M   GV PD  TF  ++ A S
Sbjct: 431 DAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACS 490

Query: 605 CLTALEQGR------QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
               +++GR      Q   +++ LD   D +    ++D+Y++ G ++ A    KQM
Sbjct: 491 RSGLVDKGRSYFHSMQQDHDIVPLD---DHYT--CMIDLYSRSGWLKQAEEFIKQM 541



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 151/688 (21%), Positives = 250/688 (36%), Gaps = 200/688 (29%)

Query: 70  LLGKSTHARILNSSQIPD-RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           +L  + HA IL +   P   +L N L+T Y+  G L +ARR+FD MP R+L++ NS+L+A
Sbjct: 27  ILTAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSA 86

Query: 129 YAHSGEGNAENVTEGFRLFRSL--RESITFT----------------------------- 157
            A +G      V +  RLF SL  R+++++                              
Sbjct: 87  LARAGL-----VRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGV 141

Query: 158 --SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI----- 210
             SR+T++ ++ +  + G       VH   L++G     F    LV++Y+K G I     
Sbjct: 142 RPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARR 201

Query: 211 --------------------------REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
                                      EA+ LF+ ++ERD + W  M+    +NG   E 
Sbjct: 202 VFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEA 261

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN--------- 294
             +F  +   G+  D  +   +L     L    E +Q+ AY I    Y +N         
Sbjct: 262 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAY-ITRTCYEDNVFVGSALVD 320

Query: 295 --------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                                N++ W   + GY Q G    A+  F  M R  ++ D  T
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFT 380

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
               +++ A   +L  G Q H   L SG    V V N+L+ +Y K G             
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG------------- 427

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
                  S+ +   L  ++  H        D    TAL+  Y + G   E          
Sbjct: 428 -------SIEDAHRLFDEMSFH--------DQVSWTALVMGYAQFGKAKE---------- 462

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                                 ++LF  M + G + D +T    + AC    ++ +G+  
Sbjct: 463 ---------------------TIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRS- 500

Query: 515 HAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDN 571
           + ++M+   ++       + ++D+Y + G +  A+     +P  PD   W T++S C   
Sbjct: 501 YFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSAC--- 557

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
                        RL G                    +E G+    NL+KLD   +P   
Sbjct: 558 -------------RLRG-------------------DMEIGKWAAENLLKLD-PQNPASY 584

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + L  M+A  G   D   L + M  R  
Sbjct: 585 VLLCSMHASKGEWNDVAKLRRGMRDRQV 612



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    + + L  GK  HA I  +    + F+ + L+ MYS+C S+  A  +F +M  +
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK 341

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ISW +++  Y  +G G      E  R+F  ++         TL  ++  C +   +  
Sbjct: 342 NIISWTAMIVGYGQNGCGE-----EAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEE 396

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
               H  AL  GL     VS ALV +Y K G I +A  LFD M   D V W  ++  YA+
Sbjct: 397 GAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQ 456

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            G  +E   LF  +   G+ PD  +   VL   S  G
Sbjct: 457 FGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSG 493



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    + + L  G   H   L S   P   ++N L+T+Y +CGS+  A RLFD+M   
Sbjct: 383 SVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH 442

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SW +++  YA  G+       E   LF  +         +T   +L  C  SG V  
Sbjct: 443 DQVSWTALVMGYAQFGKAK-----ETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDK 497

Query: 178 SET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRA 234
             +  H       +V  +     ++++YS+ G +++A+     M    D   W  +L A
Sbjct: 498 GRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 213/631 (33%), Positives = 326/631 (51%), Gaps = 79/631 (12%)

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
           YS V   NS ++MY +M    G+  D++T   +L+  +     +   +++H H +K    
Sbjct: 94  YSRVGCPNSAVSMYCEM-LERGVMPDEYTYPFLLKRFTR-DTAVKCGRELHDHIVKLGFS 151

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           ++ FV  ALI +Y  +G ++ A  +F+     D+ TWN MI GY  S    ++++LF  M
Sbjct: 152 SNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEM 211

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
                    IT+ + + AC  L  L  GK++H Y      E    + + ++DMY  CG M
Sbjct: 212 ERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDM 271

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA-------------------------- 577
             A  IF+++ + D ++WT +++G  + G+  LA                          
Sbjct: 272 DTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVN 331

Query: 578 -----LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
                LS++ +M+ + + PDEFT   ++ A + L ALE G  I A + K +   D FVG 
Sbjct: 332 RFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGN 391

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +L+DMY  CGN+E A  +F  M  R+ + W A++ GLA +G GEE L +F  M    + P
Sbjct: 392 ALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITP 451

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           D VT IGVL AC+++G+V +  + F  M  ++GIEP V HY  +VD LGRAG  KEA E+
Sbjct: 452 DEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEV 511

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I +MP + ++ +  +LLGACRV  D E  +  A++++ LEP + + YVLL NI+AA N+W
Sbjct: 512 IKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRW 571

Query: 813 DDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEG 849
           + +   R  M  + +KK P                       +  I++K++ +   +K  
Sbjct: 572 EKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFA 631

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------- 893
           GY PDT  V LD+ EEEKE A+Y HSEKLA A+GLIS+ P   I                
Sbjct: 632 GYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVA 691

Query: 894 -----LSNKEPLYAN--RFHHLRDGMCPCAD 917
                + N+E +  +  RFHH R G C C D
Sbjct: 692 KLVSKVYNREVIVRDRTRFHHFRHGSCSCKD 722



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 144/615 (23%), Positives = 264/615 (42%), Gaps = 82/615 (13%)

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK-- 206
           +L    T    L   P L L  +   +   + +H   +  GL+ +  V   ++    K  
Sbjct: 6   TLSPPPTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHE 65

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD------- 259
            G +  A+ +FD M   +  +W  M++ Y+  G       ++ ++   G+ PD       
Sbjct: 66  LGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFL 125

Query: 260 ------DESVQCVLGV---ISDLGKRHEEQVQAYAIKLL-----------LYNNNS--NV 297
                 D +V+C   +   I  LG      VQ   I L            +++ +S  +V
Sbjct: 126 LKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDV 185

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  +SGY +      +++ F  M R  V   S+T +  L+A +   +LN+G+++H  
Sbjct: 186 VTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRY 245

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                     ++ N+LI+MY+  G       D  T   +                     
Sbjct: 246 VKDLKIEPVRVLENALIDMYAACG-------DMDTALGIF-------------------- 278

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
             N    D    TA++  +   G +  A   F+     D  +W AMI GY+  N   + L
Sbjct: 279 -DNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVL 337

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LF  M  +  + DE T+ + + AC  L  L+ G+ + AY  K+  ++D  V + ++DMY
Sbjct: 338 SLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMY 397

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
             CG +  A  IFN +P  D ++WT +I G   NG  + AL ++ QM  + + PDE T  
Sbjct: 398 FNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCI 457

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMD 655
            ++ A +    +++G++  A +       +P V     +VD+  + G++++A+ + K M 
Sbjct: 458 GVLCACTHSGMVDKGKKFFARMTTQH-GIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMP 516

Query: 656 MR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV---EPDS----VTFIGVLSACSYT 707
           ++ N+++W ++L     H + E       +M A  +   EP++    V    + +AC+  
Sbjct: 517 VKPNSIVWGSLLGACRVHRDEE-----MAEMAAQQILELEPENGAVYVLLCNIYAACN-- 569

Query: 708 GLVSEAYENFHLMRE 722
                 +E  H +R+
Sbjct: 570 -----RWEKLHEVRK 579



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 238/522 (45%), Gaps = 34/522 (6%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSR--CGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  H++ + +  I +  +   ++    +   G + YAR +FD MP  +   WN+++  Y+
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G  N+        ++  + E        T   LLK       V     +H + +K+G 
Sbjct: 96  RVGCPNS-----AVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGF 150

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             + FV  AL+++YS  G++  A+ +FD   + DVV W VM+  Y  +   +E   LF +
Sbjct: 151 SSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDE 210

Query: 251 LHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
           + R  + P   ++  VL   S L     GKR    V+   I+ +        VL N  + 
Sbjct: 211 MERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVR-------VLENALID 263

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-- 363
            Y   GD   A+  F NM   +V    +++   +        + L +       +  F  
Sbjct: 264 MYAACGDMDTALGIFDNMKSRDV----ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVS 319

Query: 364 YSAVIVGNSLINMYSKMGCV------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
           ++A+I G   +N + ++  +        ++ D+FT+ S+L A + L   L L + I  + 
Sbjct: 320 WTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHL-GALELGEWIKAYI 378

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            KN+   DSFV  ALID+Y   G++ +A  +F      D  +W A+IFG  ++    +AL
Sbjct: 379 DKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEAL 438

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-YAMKSGFELDLCVSSGILDM 536
           ++FS M  +    DE+T    + AC    M+ +GK+  A    + G E ++     ++D+
Sbjct: 439 DMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDL 498

Query: 537 YVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
             + G + +A  +  ++P  P+ + W +++  C  + +E++A
Sbjct: 499 LGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMA 540



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 172/393 (43%), Gaps = 34/393 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRN--GSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           KQIH   I    +++  V   +I   C++  G M  A  +F+   G +   WN MI GY 
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
                + A+ ++  M   G   DE T    +K       +K G+++H + +K GF  ++ 
Sbjct: 96  RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V + ++ +Y   G +  A+ +F+     D V W  MISG   + + D ++ ++ +M    
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V+P   T   ++ A S L  L  G+++H  +  L       +  +L+DMYA CG+++ A 
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTAL 275

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNG-------------------------------EE 677
            +F  M  R+ + W A++ G    G                                 +E
Sbjct: 276 GIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKE 335

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L LF +M+A  ++PD  T + +L+AC++ G + E  E      +K  I+ +    + L+
Sbjct: 336 VLSLFREMQAANIKPDEFTMVSILTACAHLGAL-ELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           D     G  ++A  +  +MP     S    + G
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 10/339 (2%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK--CGAMVDAQSIFNDIPAP 556
           +K C  +  LKQ   +H+  + +G   +  V + I+    K   G M  A+ +F+ +P P
Sbjct: 26  IKTCKSMAQLKQ---IHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           +   W  MI G    G  + A+S+Y +M   GV+PDE+T+  L+K  +  TA++ GR++H
Sbjct: 83  NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
            +++KL  SS+ FV  +L+ +Y+  G +  A  +F +    + V WN M+ G  +    +
Sbjct: 143 DHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD 202

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E++KLF++M+   V P S+T + VLSACS    ++   +  H   +   IEP     + L
Sbjct: 203 ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVG-KRVHRYVKDLKIEPVRVLENAL 261

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D     G    A  +  +M      S    + G   + G     +   +K   +   D 
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNL-GQVGLARNYFDK---MPERDF 317

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLI 835
            ++  + + +   N++ +V S   EM+  N+K D   ++
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMV 356



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 28/265 (10%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y     F  S+  F +        SS    S+L       DL +GK  H  + +    P 
Sbjct: 195 YNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPV 254

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAEN------- 139
           R L N L+ MY+ CG +  A  +FD M  RD+ISW +I+  + + G+ G A N       
Sbjct: 255 RVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314

Query: 140 ------------------VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
                               E   LFR ++ +       T+  +L  C   G +   E +
Sbjct: 315 RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWI 374

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
             Y  K  +  D FV  AL+++Y   G + +A  +F+ M  RD + W  ++   A NG+G
Sbjct: 375 KAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYG 434

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCV 266
           EE   +F  + ++ + PD+  V C+
Sbjct: 435 EEALDMFSQMLKASITPDE--VTCI 457



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 21/225 (9%)

Query: 20  FSSFTK--DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           F S+T   D Y  +  F   L  F +    +         SIL        L LG+   A
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKA 376

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
            I  +    D F+ N L+ MY  CG++  A R+F+ MP RD ISW +++   A +G G  
Sbjct: 377 YIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGE- 435

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE-------TVHGYALKIGL 190
               E   +F  + ++      +T   +L  C  SG V   +       T HG    +  
Sbjct: 436 ----EALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAH 491

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
                  G +V++  + G ++EA  +   M  + + ++W  +L A
Sbjct: 492 Y------GCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGA 530


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/559 (36%), Positives = 309/559 (55%), Gaps = 56/559 (10%)

Query: 411 KQIHVHAIK------NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           +QIH  +I+      N  +    + T L   +C    M+ A  +F      ++ TWN MI
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLL--SFC--SPMSYAHQIFSQIQNPNIFTWNTMI 112

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  S N   ALEL+  MH S    D  T    +KA   L+ +++G+++H+ A+++GFE
Sbjct: 113 RGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFE 172

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             + V + ++ MY  CG    A  +F  +   + V W ++I+G   NG  + AL+++ +M
Sbjct: 173 SLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREM 232

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
            L GV PD FT   L+ A + L AL  GR+ H  ++K+    +   G +L+D+YAKCG+I
Sbjct: 233 GLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSI 292

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             A+ +F +M+ ++ V W +++VGLA +G G+E L+LF++++  G+ P  +TF+GVL AC
Sbjct: 293 RQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYAC 352

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ G+V E ++ F  M+E+YGI P++EHY  +VD LGRAG  K+A E I +MP + +A +
Sbjct: 353 SHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVV 412

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
            R LLGAC + G    G+    +L+ LEP  S  YVLLSN++A+  +W DV   R  M R
Sbjct: 413 WRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLR 472

Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           + VKK P                        + I+ K+  + K +K  GYVP    VL D
Sbjct: 473 EGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLAD 532

Query: 862 VEEEEKERALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPL 900
           +EEEEKE AL YHSEK+A A+ LI+T    P  V+                  + ++E +
Sbjct: 533 IEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIV 592

Query: 901 YAN--RFHHLRDGMCPCAD 917
             +  RFHH +DG C C D
Sbjct: 593 VRDRSRFHHFKDGHCSCKD 611



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 6/240 (2%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +  L   ++ H S     +  +  L  AI+   D+  G+  H+  + +      F+ N L
Sbjct: 122 MPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTL 181

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY+ CG    A +LF+ M +R+L++WNS++  YA +G  N     E   LFR +    
Sbjct: 182 VHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPN-----EALTLFREMGLRG 236

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T+  LL  C   G +      H Y +K+GL  +     AL+++Y+K G IR+A 
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M+E+ VV W  ++   A NGFG+E   LF +L R GL P + +   VL   S  G
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 54/339 (15%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           +YA ++     N N+  WN  + GY +  +   A+E +  M  S ++ D+ T+   L A+
Sbjct: 91  SYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAI 150

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           A   ++  G+++H   +++GF S V V N+L++MY+  G                     
Sbjct: 151 AKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWN 210

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                  + G+  D FT+ S+L A + L   L L ++ HV+ +K
Sbjct: 211 SVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAEL-GALALGRRAHVYMVK 269

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                +     AL+D+Y + GS+ +A  +F+  +   + +W ++I G  ++    +ALEL
Sbjct: 270 VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALEL 329

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM-HAYAMKSGFELDLCVSSGIL 534
           F  +   G    EIT    + AC    M+ +G    K+M   Y +    E   C    ++
Sbjct: 330 FKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGC----MV 385

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
           D+  + G +  A     ++P  P+ V W T++  C  +G
Sbjct: 386 DLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 34/279 (12%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           + T+ S C  + YA ++F ++ + ++ +WN+++  YA S     EN      L+R +  S
Sbjct: 80  IFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAES-----ENPMPALELYRQMHVS 134

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                  T   LLK       V   E VH  A++ G     FV   LV++Y+  G    A
Sbjct: 135 CIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESA 194

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             LF+ M ER++V W  ++  YA NG   E   LF ++   G+ PD  ++  +L   ++L
Sbjct: 195 HKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAEL 254

Query: 274 GKRH-EEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKL 304
           G      +   Y +K+ L  N                              +VV W   +
Sbjct: 255 GALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLI 314

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            G    G    A+E F  + R  +    +TF+  L A +
Sbjct: 315 VGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 240/845 (28%), Positives = 391/845 (46%), Gaps = 144/845 (17%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R T + + + C +   +   +  H + +  G     FV+  L+ +Y K   +  A  +F+
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 219 GMQERDVVLWKVM--------------------------------LRAYAENGFGEEVFH 246
            M +RD+V W  M                                +  Y +NG  ++   
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV---QAYAIKLLL---YN-------- 292
           +F+ +   G+  D  ++   L + S L    E+QV   Q + I + +   Y+        
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLL----EDQVLGIQIHGIAVQMGFDYDVVTGSALV 199

Query: 293 -------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                               + N + W+  ++G +Q       ++ F  M R  +     
Sbjct: 200 DMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQS 259

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
           T+     + AG     LG Q+H   LK+ F S VIVG + ++MY+K    C   +D + L
Sbjct: 260 TYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAK----CDNMSDAYKL 315

Query: 394 ASVLR----------------------------------------------ASSSLPEGL 407
            S+L                                               +++++ +G 
Sbjct: 316 FSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGH 375

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
               Q+H  AIK++  ++  V+ A++D+Y + G++ EA  LF+  +  D  +WNA+I   
Sbjct: 376 SEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITAC 435

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
             + +  K L  F  M  S    DE T  + +KAC        G ++H   +KSG  L +
Sbjct: 436 EQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKM 495

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V S ++DMY KCG M +A+ I   +     V+W  +ISG     + + +   +  M   
Sbjct: 496 FVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEM 555

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           GV PD FT+A ++   + L  +  G+QIHA +IKL+  SD ++  +LVDMY+KCGN+ D+
Sbjct: 556 GVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDS 615

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
            ++F++   R++V WNAM+ G A HG GEE L+LFE M    ++P+  TF+ VL ACS+ 
Sbjct: 616 LLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHV 675

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           G   +    F  M   Y +EP++EHYS +VD LGR+G+ +EA  LI  MPFEA A + R 
Sbjct: 676 GNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRT 735

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL  C++QG+ E  +  A  L+ L+P DSSAY LLSNI+A A  W  V+  R  M+  N+
Sbjct: 736 LLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNL 795

Query: 828 KKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK+P                        ++I++ ++ LI  ++  G  P+ D +   VEE
Sbjct: 796 KKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTI--QVEE 853

Query: 865 EEKER 869
            E+ R
Sbjct: 854 VEENR 858



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 176/709 (24%), Positives = 307/709 (43%), Gaps = 108/709 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA ++ S   P  F+TN L+ MY +C +L YA ++F++MP RD++SWN+++   A 
Sbjct: 43  GKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAG 102

Query: 132 SGE-------------------------GNAEN--VTEGFRLFRSLRESITFTSRLTLAP 164
           +G                          G  +N  + +   +F  +R+        TLA 
Sbjct: 103 AGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAV 162

Query: 165 LLKLC-LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LK+C L    V   + +HG A+++G  +D     ALV++Y+K   + ++  +F  + ++
Sbjct: 163 SLKICSLLEDQVLGIQ-IHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDK 221

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQ 282
           + + W   +    +N        LF ++ R G+     +   V    + L   R   Q+ 
Sbjct: 222 NWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLH 281

Query: 283 AYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNH 314
            +A+K             L +Y                 + N+  +N  + GY +     
Sbjct: 282 CHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGF 341

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            A + F+ + +++  +D V+   AL+A A     + G Q+HG  +KS   S + V N+++
Sbjct: 342 QAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAIL 401

Query: 375 NMYSKMGCVC-------------------------------------------GLRTDQF 391
           +MY K G +                                             +  D+F
Sbjct: 402 DMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEF 461

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T  SVL+A +          ++H   IK+      FV +AL+D+Y + G M EAE +   
Sbjct: 462 TYGSVLKACAG-QRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYR 520

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
            +   + +WNA+I G+ L   S  +   FSHM   G   D  T AT +  C  L  +  G
Sbjct: 521 LEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLG 580

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           KQ+HA  +K     D+ ++S ++DMY KCG M D+  +F   P  D V W  MI G   +
Sbjct: 581 KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYH 640

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDP 628
           G  + AL ++  M    + P+  TF  +++A S +   ++G    Q  A++  L+   + 
Sbjct: 641 GLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEH 700

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +    +VD+  + G +E+A  L + M    + ++W  +L      GN E
Sbjct: 701 YS--CMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVE 747



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+          G   H RI+ S      F+ + L+ MYS+CG +  A ++  ++ ++
Sbjct: 465 SVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQ 524

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++SWN+I++ +  S +  +E+     R F  + E        T A +L  C +   V  
Sbjct: 525 TMVSWNAIISGF--SLQKKSEDSQ---RFFSHMLEMGVEPDNFTYATVLDTCANLATVGL 579

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H   +K+ L+ D +++  LV++YSK G + ++  +F    +RD V W  M+  +A 
Sbjct: 580 GKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAY 639

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G GEE   LF  +    + P+  +   VL   S +G
Sbjct: 640 HGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVG 676


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/575 (35%), Positives = 310/575 (53%), Gaps = 47/575 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           DQ T+A+ +++ S + + L + + +  +A K   + D FV  +LI +Y   G +  A  L
Sbjct: 170 DQHTVANTVKSCSRMCD-LSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVL 228

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F       +  WNAMI GY+ + +  + +E+F  M       DE+T+ +   ACG L   
Sbjct: 229 FHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDA 288

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G+ +  YA + G      +++ ++DMY KCG +  A+ +F+ + + D VAW+ MISG 
Sbjct: 289 NLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGY 348

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +     AL+I+++M+ + V P++ T   ++ A + L ALE G+ +H+ + + D     
Sbjct: 349 TQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTV 408

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            +G +LVD YAKCG I+DA   F+ M +RNT  W A++ G+A +G   E L+LF  M   
Sbjct: 409 ILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEA 468

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            +EP  VTFIGVL ACS+  LV E   +F  M + YGI P +EHY  +VD LGRAG   E
Sbjct: 469 NIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDE 528

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I +MP E +A + RALL AC V  + E G+   ++++ L+P  S  Y+LLSN +A+
Sbjct: 529 AYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYAS 588

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
             QW +    R EMK K V+K P                          I+ KV  +I+ 
Sbjct: 589 VGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIEN 648

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------ 893
           IK  GY+P+T    LDV+E EK+ ++ +HSEKLA A+GL+ + P + I            
Sbjct: 649 IKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDC 708

Query: 894 ---------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                    + N+E +    NRFHH +DG+C C D
Sbjct: 709 HSATKLISKVYNREIIVRDRNRFHHFKDGLCSCND 743



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 34/305 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL +G+   A       + D+F+ N+L+ MY+ CG +V A  LF  +  + +I+WN+++A
Sbjct: 186 DLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIA 245

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y  +G+       E   +F+ + E       +TL  +   C   G     + +  YA +
Sbjct: 246 GYVKNGDWK-----EVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEE 300

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G++    ++ ALV++Y+K G++ +A+ LFD M  RDVV W  M+  Y ++    E   +
Sbjct: 301 KGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAI 360

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAY---------------------- 284
           F ++  + + P+D ++  VL   + LG     + V +Y                      
Sbjct: 361 FNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAK 420

Query: 285 ------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                 A+K        N   W   + G    G +  A+E F +M+ +N++   VTF+  
Sbjct: 421 CGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGV 480

Query: 339 LAAVA 343
           L A +
Sbjct: 481 LLACS 485



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 131/551 (23%), Positives = 219/551 (39%), Gaps = 118/551 (21%)

Query: 76  HARILNSSQI---PDRF----LTNNLMTMYSRCGSLVYARRLFD--KMPDRDLISWNSIL 126
           HA +L S  +   PD F        L    +    L YA RLF     P R   S+N ++
Sbjct: 83  HATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSARSYNILI 142

Query: 127 AAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
            ++  +G        +   LF   L ++     + T+A  +K C     +     V  YA
Sbjct: 143 RSFLRAGHPE-----DALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYA 197

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            K G + D+FV  +L+++Y+  G +  A  LF  +Q + V+ W  M+  Y +NG  +EV 
Sbjct: 198 FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257

Query: 246 HLFVDLHRSGLCPDDE----SVQCVLGVISD------LGKRHEEQ------------VQA 283
            +F  +      P DE    SV    G + D      + +  EE+            V  
Sbjct: 258 EMFKGMLEVR-APFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDM 316

Query: 284 YAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           YA         +L    ++ +VV W+  +SGY Q      A+  F  M  + V  + VT 
Sbjct: 317 YAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTM 376

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
           +  L+A A    L  G+ +H    +      VI+G +L++ Y+K GC+            
Sbjct: 377 VSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCI----------KD 426

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
            ++A  S+P                  V +++  TALI     NG               
Sbjct: 427 AVKAFESMP------------------VRNTWTWTALIKGMASNG--------------- 453

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC--GCLLMLKQGKQ 513
                            S +ALELFS M  +     ++T    + AC  GCL  +++G++
Sbjct: 454 ----------------RSREALELFSSMLEANIEPTDVTFIGVLLACSHGCL--VEEGRR 495

Query: 514 MHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-- 568
            H  +M   + +   +     ++D+  + G + +A     ++P  P+ V W  ++S C  
Sbjct: 496 -HFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTV 554

Query: 569 ---VDNGEEDL 576
              V+ GEE L
Sbjct: 555 HKNVEIGEEAL 565



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 36/275 (13%)

Query: 546 AQSIFNDIPAPDDVA--WTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKA 602
           A  +F   P P   A  +  +I   +  G  + AL ++ +M   + V PD+ T A  VK+
Sbjct: 121 AIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKS 180

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            S +  L  GR + A   K     D FV  SL+ MYA CG++  A++LF  + ++  + W
Sbjct: 181 CSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAW 240

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG------LVSEAYEN 716
           NAM+ G  ++G+ +E +++F+ M       D VT + V +AC   G       ++E  E 
Sbjct: 241 NAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEE 300

Query: 717 FHLMREKYGIEPEVEHY------------------------SFLVDALGRAGRTKEAGEL 752
             ++R +      V+ Y                        S ++    ++ R +EA  +
Sbjct: 301 KGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAI 360

Query: 753 ILSM---PFEASASMHRALLGACRVQGDTETGKWV 784
              M       +     ++L AC V G  ETGKWV
Sbjct: 361 FNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWV 395



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 12/200 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L  GK  H+ I          L   L+  Y++CG +  A + F+ MP R
Sbjct: 378 SVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR 437

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +  +W +++   A +G        E   LF S+ E+    + +T   +L  C S G +  
Sbjct: 438 NTWTWTALIKGMASNGRSR-----EALELFSSMLEANIEPTDVTFIGVLLAC-SHGCLVE 491

Query: 178 SETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRA 234
               H  ++    G+       G +V++  + G I EA +F+ +   E + V+W+ +L A
Sbjct: 492 EGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551

Query: 235 ---YAENGFGEEVFHLFVDL 251
              +     GEE     V L
Sbjct: 552 CTVHKNVEIGEEALKQIVPL 571


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 201/560 (35%), Positives = 316/560 (56%), Gaps = 53/560 (9%)

Query: 411 KQIHVHAIKND-TVADSFVSTALIDVYCRNGS---MAEAEYLFEN-KDGFDLATWNAMIF 465
           +QIH  +I+N  +++D+ +   LI       S   M+ A  +F   +   ++  WN +I 
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 466 GYILSNNSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
           GY    NS  A+ L+  M  SG    D  T    +KA G +  ++ G+ +H+  ++SGF 
Sbjct: 94  GYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG 153

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             + V + +L +Y  CG +  A  +F+ +P  D VAW ++I+G  +NG+ + AL++Y +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
            L G+ PD FT   L+ A + + AL  G++ H  +IK+  + +      L+D+YA+CG +
Sbjct: 214 DLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVEPDSVTFIGVLSA 703
           E+A  LF +M  +N+V W +++VGLA +G G+E ++LF++M++  G+ P  +TF+G+L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYA 333

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ G+V E +E F  M E+Y IEP +EH+  +VD L RAG+ K+A E IL MP + +  
Sbjct: 334 CSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVV 393

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           + R LLGAC V GD++  +    K++ LEP  S  YVLLSN++A+  +W DV   R +M 
Sbjct: 394 IWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 824 RKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
           R  V+K P                        D+I+AK++ +  R++  GYVP    V +
Sbjct: 454 RDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYV 513

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEP 899
           DVEEEEKE AL YHSEK+A A+ LISTP   P  V+                  + N+E 
Sbjct: 514 DVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREI 573

Query: 900 LYAN--RFHHLRDGMCPCAD 917
           +  +  RFHH ++G C C D
Sbjct: 574 VVRDRSRFHHFKNGSCSCQD 593



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 171/332 (51%), Gaps = 12/332 (3%)

Query: 369 VGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
           +GNS+  +++Y +M     +  D  T   +L+A   + + + L + IH   I++   +  
Sbjct: 98  IGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMAD-VRLGETIHSVVIRSGFGSLI 156

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V  +L+ +Y   G +A A  +F+     DL  WN++I G+  +    +AL L++ M   
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLK 216

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G + D  TI + + AC  +  L  GK+ H Y +K G   +L  S+ +LD+Y +CG + +A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSC 605
           +++F+++   + V+WT++I G   NG    A+ ++  M    G++P E TF  ++ A S 
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSH 336

Query: 606 LTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
              +++G +    +    K++   + F    +VD+ A+ G ++ AY    +M M+ N V+
Sbjct: 337 CGMVKEGFEYFRRMSEEYKIEPRIEHFG--CMVDLLARAGQVKKAYEYILKMPMQPNVVI 394

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           W  +L     HG+ +  L     MK   +EP+
Sbjct: 395 WRTLLGACTVHGDSD--LAELARMKILQLEPN 424



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 56/333 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQI 354
           NV +WN  + GY ++G++  A+  +  M  S  V+ D+ T+   L AV    ++ LG+ I
Sbjct: 84  NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------ 384
           H   ++SGF S + V NSL+++Y+  G V                               
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G++ D FT+ S+L A + +   L L K+ HV+ IK     +   S  
Sbjct: 204 EEALALYTEMDLKGIKPDGFTIVSLLSACAKI-GALTLGKRFHVYMIKVGLTRNLHSSNV 262

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y R G + EA+ LF+     +  +W ++I G  ++    +A+ELF +M +    L 
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLP 322

Query: 492 -EITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            EIT    + AC    M+K+G     +    Y ++   E   C    ++D+  + G +  
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGC----MVDLLARAGQVKK 378

Query: 546 AQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           A      +P  P+ V W T++  C  +G+ DLA
Sbjct: 379 AYEYILKMPMQPNVVIWRTLLGACTVHGDSDLA 411



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 128/245 (52%), Gaps = 7/245 (2%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++SL   ++ S F    + +  F +L+     +D+ LG++ H+ ++ S      ++ N+L
Sbjct: 104 AVSLYREMRASGFVEPDTHTYPF-LLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSL 162

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + +Y+ CG +  A ++FDKMP++DL++WNS++  +A +G+       E   L+  +    
Sbjct: 163 LHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE-----EALALYTEMDLKG 217

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T+  LL  C   G +   +  H Y +K+GL  +   S  L+++Y++ G++ EAK
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDL 273
            LFD M +++ V W  ++   A NG G+E   LF ++  + GL P + +   +L   S  
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHC 337

Query: 274 GKRHE 278
           G   E
Sbjct: 338 GMVKE 342



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 53/298 (17%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           FSI R+ +S SD  LGK     +++    P                 + YA ++F K+  
Sbjct: 39  FSI-RNGVSISDAELGKHLIFYLVSLPSPP----------------PMSYAHKVFSKIEK 81

Query: 117 R-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGY 174
             ++  WN+++  YA  G     N      L+R +R S          P LLK       
Sbjct: 82  PINVFIWNTLIRGYAEIG-----NSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMAD 136

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V   ET+H   ++ G     +V  +L+++Y+  G +  A  +FD M E+D+V W  ++  
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN 293
           +AENG  EE   L+ ++   G+ PD  ++  +L   + +G     ++   Y IK+ L  N
Sbjct: 197 FAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRN 256

Query: 294 --NSNVVL--------------------------WNKKLSGYLQVGDNHGAIECFVNM 323
             +SNV+L                          W   + G    G    AIE F NM
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNM 314


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 204/615 (33%), Positives = 328/615 (53%), Gaps = 84/615 (13%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L+ D +T  SV+ A + L +   ++K IH   +     +D ++  ALID+YCR   + +A
Sbjct: 111 LQPDTYTFPSVINACAGLLD-FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKA 169

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH-----MHTSGE-RLDEITIATAV 499
             +FE     D+ +WN++I GY  +   ++ALE++       M    + + D +TI + +
Sbjct: 170 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSIL 229

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           +ACG L  L+ GK +H Y + SG+E D   S+ +++MY KCG ++ +Q +F+ +   D V
Sbjct: 230 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 289

Query: 560 AWTTMISGCVDNGE-----------------------------ED--LALSIYHQMRLSG 588
           +W +MI+  + NG+                             ED  L L +  +MR  G
Sbjct: 290 SWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 349

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V PD  T   ++   S L A  QG++IH  + KL   SD  VG  L++MY+KCG++ +++
Sbjct: 350 VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSF 409

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +FK M  ++ V W A++     +G G++ ++ F +M+A G+ PD V F+ ++ ACS++G
Sbjct: 410 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 469

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV E    FH M++ Y IEP +EHY+ +VD L R+    +A + ILSMP +  +S+  AL
Sbjct: 470 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 529

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L ACR+ GDTE  + V+E+++ L P D+  YVL+SNI+AA  +WD V S R  +K + +K
Sbjct: 530 LSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLK 589

Query: 829 KDP----------------ADLIFAKVEGLIKRI-------KEGGYVPDTDFVLLDVEEE 865
           KDP                    F + E + K +        + GY+ +  FVL D++E+
Sbjct: 590 KDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDED 649

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--A 902
           EK   L  HSE+LA A+GL++T P + +                     +  +E L   A
Sbjct: 650 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 709

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH  +DG C C D
Sbjct: 710 NRFHVFKDGACSCGD 724



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 227/535 (42%), Gaps = 68/535 (12%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERDVVLWKVMLRAYAENG 239
           +H   + +GL      S  L+  Y+ F     +  +F       +V LW  ++RA   NG
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNN 294
              E   L+ +  R  L PD  +   V+   +     ++ K   ++V        LY  N
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGN 154

Query: 295 S------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR----- 325
           +                        +VV WN  +SGY   G  + A+E +   I+     
Sbjct: 155 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEM 214

Query: 326 -SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
            +  + D +T    L A     +L  G+ +H   + SG+       N LINMY+K G   
Sbjct: 215 VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG--- 271

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
                       L AS  +  G+                 DS    ++I+VY +NG M +
Sbjct: 272 -----------NLLASQEVFSGM--------------KCKDSVSWNSMINVYIQNGKMGD 306

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           +  +FEN    D+ TWN +I   + S + +  L + S M T G   D  T+ + +  C  
Sbjct: 307 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 366

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L   +QGK++H    K G E D+ V + +++MY KCG++ ++  +F  +   D V WT +
Sbjct: 367 LAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTAL 426

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           IS C   GE   A+  + +M  +G+VPD   F  ++ A S    +E+G   + + +K D 
Sbjct: 427 ISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDY 485

Query: 625 SSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
             +P +     +VD+ ++   ++ A      M ++ ++ +W A+L      G+ E
Sbjct: 486 KIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTE 540



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 257/649 (39%), Gaps = 116/649 (17%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T+  L S +LSL    Q+      + +  + S++       D  + KS H R+L+     
Sbjct: 91  THNGLFSEALSLYSETQRIRLQPDTYT--FPSVINACAGLLDFEMAKSIHDRVLDMGFGS 148

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA--ENVTEGF 144
           D ++ N L+ MY R   L  AR++F++MP RD++SWNS+++ Y  +G  N   E   +  
Sbjct: 149 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSI 208

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           +LF  +         LT+  +L+ C   G +   + VH Y +  G   D   S  L+N+Y
Sbjct: 209 KLFMEMVNQFK-PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 267

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G +  ++ +F GM+ +D V W  M+  Y +NG   +   +F                
Sbjct: 268 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVF---------------- 311

Query: 265 CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                         E ++A            +++ WN  ++  +   D +  +     M 
Sbjct: 312 --------------ENMKA-----------RDIITWNTIIASCVHSEDCNLGLRMISRMR 346

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
              V  D  T L  L   +       G++IHG   K G  S V VGN LI MYSK    C
Sbjct: 347 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK----C 402

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   + F +  +++                          D    TALI   C  G   E
Sbjct: 403 GSLRNSFQVFKLMKTK------------------------DVVTWTALISA-C--GMYGE 435

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
            +                            KA+  F  M  +G   D +     + AC  
Sbjct: 436 GK----------------------------KAVRAFGEMEAAGIVPDHVAFVAIIFACSH 467

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAW 561
             ++++G   + + MK  ++++  +   + ++D+  +   +  A+     +P  PD   W
Sbjct: 468 SGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIW 526

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV-KASSCLTALEQGRQIHANLI 620
             ++S C  +G+ ++A  +    R+  + PD+  + +LV    + L   +Q R I  ++ 
Sbjct: 527 GALLSACRMSGDTEIAERVSE--RIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIK 584

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
                 DP  G S +++  K          F+Q +  N +L   ML GL
Sbjct: 585 ARGLKKDP--GCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL--GMLAGL 629



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 161/355 (45%), Gaps = 39/355 (10%)

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN++I     +    +AL L+S       + D  T  + + AC  LL  +  K +H   +
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 142

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             GF  DL + + ++DMY +   +  A+ +F ++P  D V+W ++ISG   NG  + AL 
Sbjct: 143 DMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 202

Query: 580 IYHQM------RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
           IY+Q        ++   PD  T   +++A   L  LE G+ +H  +I      D      
Sbjct: 203 IYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 262

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH----- 688
           L++MYAKCGN+  +  +F  M  +++V WN+M+    Q+G   ++LK+FE+MKA      
Sbjct: 263 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITW 322

Query: 689 --------------------------GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
                                     GV PD  T + +L  CS      +  E  H    
Sbjct: 323 NTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE-IHGCIF 381

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           K G+E +V   + L++   + G  + + ++   M  +   +   AL+ AC + G+
Sbjct: 382 KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW-TALISACGMYGE 435



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 10/262 (3%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTTMISGC 568
           Q  ++H+  +  G    +  S+ ++  Y        + S+F    P+ +   W ++I   
Sbjct: 31  QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRAL 90

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG    ALS+Y + +   + PD +TF  ++ A + L   E  + IH  ++ +   SD 
Sbjct: 91  THNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDL 150

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL-------KL 681
           ++G +L+DMY +  +++ A  +F++M +R+ V WN+++ G   +G   E L       KL
Sbjct: 151 YIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKL 210

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F +M  +  +PD +T   +L AC + G + E  +  H      G E +    + L++   
Sbjct: 211 FMEM-VNQFKPDLLTITSILQACGHLGDL-EFGKYVHDYMITSGYECDTTASNILINMYA 268

Query: 742 RAGRTKEAGELILSMPFEASAS 763
           + G    + E+   M  + S S
Sbjct: 269 KCGNLLASQEVFSGMKCKDSVS 290


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  354 bits (908), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 220/620 (35%), Positives = 329/620 (53%), Gaps = 74/620 (11%)

Query: 367 VIVGNSLINMYSKMGCVCG-------------LRTDQFTLASVLRASSSLPEGLHLSKQI 413
           ++  N+LI  Y+  G  CG             L  D FTL+ V+ A     + + L +Q+
Sbjct: 106 IVSYNTLIAAYADRG-ECGPTLRLFEEVRELRLGLDGFTLSGVITACG---DDVGLVRQL 161

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN---KDGFDLATWNAMIFGYILS 470
           H   +       + V+ A++  Y R G ++EA  +F       G D  +WNAMI      
Sbjct: 162 HCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQH 221

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +A+ LF  M   G ++D  T+A+ + A  C+  L  G+Q H   +KSGF  +  V 
Sbjct: 222 REGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVG 281

Query: 531 SGILDMYVKC-GAMVDAQSIFNDIPAPDDVAWTTMISG--CVDNGEEDLALSIYHQMRLS 587
           SG++D+Y KC G+MV+ + +F +I APD V W TMISG    ++  ED  L  + +M+ +
Sbjct: 282 SGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSED-GLWCFREMQRN 340

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF-VGISLVDMYAKCGNIED 646
           G  PD+ +F  +  A S L++   G+Q+HA  IK D   +   V  +LV MY+KCGN+ D
Sbjct: 341 GFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHD 400

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  +F  M   NTV  N+M+ G AQHG   E+L+LFE M    + P+S+TFI VLSAC +
Sbjct: 401 ARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVH 460

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
           TG V E  + F++M+E++ IEPE EHYS ++D LGRAG+ KEA  +I +MPF   +    
Sbjct: 461 TGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWA 520

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
            LLGACR  G+ E     A + + LEP++++ YV+LSN++A+A +W++  + +  M+ + 
Sbjct: 521 TLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERG 580

Query: 827 VKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL--- 860
           VKK P                          I   +  ++K++K+ GYVPD  + L+   
Sbjct: 581 VKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDE 640

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA------------------ 902
           +VE +E+ER L YHSEKLA A+GLIST     IL  K                       
Sbjct: 641 EVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREI 700

Query: 903 -----NRFHHLRDGMCPCAD 917
                +RFH  ++G C C D
Sbjct: 701 TVRDTHRFHCFKEGHCSCRD 720



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 241/593 (40%), Gaps = 142/593 (23%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL------------- 104
           ++L+  I+  DL+ GK  HA    S   P  +L+N+   +YS+CGSL             
Sbjct: 14  NLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYP 73

Query: 105 -VY-----------------ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
            V+                 ARR+FD++P  D++S+N+++AAYA  GE          RL
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPT-----LRL 128

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +RE        TL+ ++  C     V     +H + +  G      V+ A++  YS+
Sbjct: 129 FEEVRELRLGLDGFTLSGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVLACYSR 186

Query: 207 FGKIREAKFLFDGMQE---RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
            G + EA+ +F  M E   RD V W  M+ A  ++  G E   LF ++ R GL  D  ++
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246

Query: 264 QCVLGV---ISDL-GKRHEEQVQAYAIKLLLYNNN------------------------- 294
             VL     + DL G R   Q     IK   + N+                         
Sbjct: 247 ASVLTAFTCVKDLVGGR---QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFE 303

Query: 295 ----SNVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                ++VLWN  +SG+    D +   + CF  M R+  + D  +F+   +A +   + +
Sbjct: 304 EITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPS 363

Query: 350 LGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
           LG+Q+H   +KS   Y+ V V N+L+ MYSK G V   R          R   ++PE   
Sbjct: 364 LGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDAR----------RVFDTMPE--- 410

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
                      ++TV                                   + N+MI GY 
Sbjct: 411 -----------HNTV-----------------------------------SLNSMIAGYA 424

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF--ELD 526
                 ++L LF  M       + IT    + AC     +++G Q +   MK  F  E +
Sbjct: 425 QHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPE 483

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLAL 578
               S ++D+  + G + +A+ I   +P  P  + W T++  C  +G  +LA+
Sbjct: 484 AEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAV 536



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 40/246 (16%)

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS----- 548
           T    +KAC     L  GK +HA   KS       +S+    +Y KCG++ +AQ+     
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 549 --------------------------IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
                                     +F++IP PD V++ T+I+   D GE    L ++ 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAK 640
           ++R   +  D FT + ++ A  C   +   RQ+H  ++   C  D +  +  +++  Y++
Sbjct: 131 EVRELRLGLDGFTLSGVITA--CGDDVGLVRQLHCFVVV--CGHDCYASVNNAVLACYSR 186

Query: 641 CGNIEDAYILFKQMDM---RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
            G + +A  +F++M     R+ V WNAM+V   QH  G E + LF +M   G++ D  T 
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246

Query: 698 IGVLSA 703
             VL+A
Sbjct: 247 ASVLTA 252



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +L++ YAK   I  A  +F ++   + V +N ++   A  G    TL+LFE+++   +  
Sbjct: 80  TLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGL 139

Query: 693 DSVTFIGVLSACS-YTGLVSEAY 714
           D  T  GV++AC    GLV + +
Sbjct: 140 DGFTLSGVITACGDDVGLVRQLH 162


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 203/555 (36%), Positives = 311/555 (56%), Gaps = 48/555 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK   +   ++ T LI +Y +   + +A  +F+     ++ +W AMI  Y   
Sbjct: 82  QRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQR 141

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             + +AL LF  M  S    +  T AT + +C   L  + G+Q+H+ A+K  +E  + V 
Sbjct: 142 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG 201

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K G + DA  +F+ +P  D VA T +ISG    G ++ AL ++ Q+++ G+ 
Sbjct: 202 SSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMN 261

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  T+A ++ A S L AL  G+Q+H+++++    S   +  SL+DMY+KCGN+  A  +
Sbjct: 262 SNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRI 321

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F  M  R  + WNAMLVG ++HG   E L+LF+ M+    V+PDS+T++ VLS CS+  L
Sbjct: 322 FDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQL 381

Query: 710 VSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
                E F+ ++  K GIEP++ HY  +VD LGRAGR +EA + I  MPF  +A++  +L
Sbjct: 382 EDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSL 441

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LG+CRV  D E G  V +KL+ LEP ++  YV+LSN++A+A +W+D+ + R  M+ K V 
Sbjct: 442 LGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVT 501

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                        + +  KV+ L  + KE GYVPD   VL DV+EE
Sbjct: 502 KEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEE 561

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA-------- 902
           +KE+ L  HSEKLA A+GLI+TP  + I   K                 LYA        
Sbjct: 562 QKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDK 621

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH++  G+C C D
Sbjct: 622 NRFHNIVGGVCSCGD 636



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 144/264 (54%), Gaps = 3/264 (1%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           +++G+++H + +K+ +   + + + ++ +Y KC  + DA+ +F+++P  + V+WT MIS 
Sbjct: 78  IREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISA 137

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G    AL+++ +M  S   P+ FTFA ++ +       E GRQIH+  IK +  S 
Sbjct: 138 YSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESH 197

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FVG SL+DMYAK G I DA+ +F  +  R+ V   A++ G AQ G  EE LKLF  ++ 
Sbjct: 198 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQI 257

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            G+  +SVT+  VL+A S    ++   + + H++R   G    V   + L+D   + G  
Sbjct: 258 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS--GQYSYVVLLNSLIDMYSKCGNV 315

Query: 747 KEAGELILSMPFEASASMHRALLG 770
             A  +  SMP     S +  L+G
Sbjct: 316 CYARRIFDSMPERTCISWNAMLVG 339



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 43/359 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL   +S   +  G+  H  ++ +  +P  +L   L+ +Y++C  L  AR +FD+MP R
Sbjct: 67  SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW ++++AY+  G        E   LF  +  S T  +  T A +L  C  S     
Sbjct: 127 NVVSWTAMISAYSQRGFA-----FEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET 181

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H  A+K       FV  +L+++Y+K G+I +A  +F  + ERDVV    ++  YA+
Sbjct: 182 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQ 241

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK--------- 287
            G  EE   LF  L   G+  +  +   VL  +S L    H +QV ++ ++         
Sbjct: 242 MGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVL 301

Query: 288 ----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN- 327
               + +Y+   NV               + WN  L GY + G     +E F  M   N 
Sbjct: 302 LNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENK 361

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           V+ DS+T+L  L+  +     ++G +I        FY+ V   + +       GCV  L
Sbjct: 362 VKPDSITYLAVLSGCSHGQLEDMGLEI--------FYNMVNGKDGIEPDIGHYGCVVDL 412



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 188/422 (44%), Gaps = 53/422 (12%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---------------------------- 382
           GQ++H   +K+ +  +V +   LI +Y+K  C                            
Sbjct: 81  GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQ 140

Query: 383 -----------VCGLRTD----QFTLASVLRAS-SSLPEGLHLSKQIHVHAIKNDTVADS 426
                      V  LR+D     FT A++L +   SL  G    +QIH  AIK +  +  
Sbjct: 141 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSL--GFETGRQIHSIAIKRNYESHM 198

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           FV ++L+D+Y ++G + +A  +F      D+    A+I GY       +AL+LF  +   
Sbjct: 199 FVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIE 258

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G   + +T A+ + A   L  L  GKQ+H++ ++SG    + + + ++DMY KCG +  A
Sbjct: 259 GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYA 318

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSC 605
           + IF+ +P    ++W  M+ G   +G     L ++  MR    V PD  T+  ++   S 
Sbjct: 319 RRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSH 378

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNT-VLW 662
               + G +I  N++      +P +G    +VD+  + G +E+A+   K+M    T  +W
Sbjct: 379 GQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIW 438

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH-LMR 721
            ++L     H + E  + +    K   +EP++     +LS    +    E   N   LM+
Sbjct: 439 GSLLGSCRVHSDVE--IGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQ 496

Query: 722 EK 723
           EK
Sbjct: 497 EK 498



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 189/454 (41%), Gaps = 94/454 (20%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L  C+S   +   + VH + +K   +   ++   L+ +Y+K   + +A+ +FD M +R+
Sbjct: 68  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQA 283
           VV W  M+ AY++ GF  E  +LFV++ RS   P+  +   +L      LG     Q+ +
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 187

Query: 284 YAIK-------------LLLYNNNS---------------NVVLWNKKLSGYLQVGDNHG 315
            AIK             L +Y  +                +VV     +SGY Q+G +  
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A++ F  +    +  +SVT+   L A++G   LN G+Q+H   L+SG YS V++ NSLI+
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 307

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MYSK G VC  R          R   S+PE   +S                         
Sbjct: 308 MYSKCGNVCYAR----------RIFDSMPERTCIS------------------------- 332

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEIT 494
                                   WNAM+ GY     + + LELF  M    + + D IT
Sbjct: 333 ------------------------WNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 368

Query: 495 IATAVKACGCLLMLKQGKQMHAYAM---KSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
               +  C    +   G ++  Y M   K G E D+     ++D+  + G + +A     
Sbjct: 369 YLAVLSGCSHGQLEDMGLEIF-YNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIK 427

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +P  P    W +++  C  + + ++ + +  ++
Sbjct: 428 KMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKL 461



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 6/116 (5%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +S+S  + S+L      + L  GK  H+ +L S Q     L N+L+ MYS+CG++ YARR
Sbjct: 261 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 320

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR----ESITFTSRLT 161
           +FD MP+R  ISWN++L  Y  S  G A  V E F+L R       +SIT+ + L+
Sbjct: 321 IFDSMPERTCISWNAMLVGY--SKHGMAREVLELFKLMREENKVKPDSITYLAVLS 374



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 1/150 (0%)

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A+ +G+++H ++IK       ++   L+ +Y KC  + DA  +F +M  RN V W AM+ 
Sbjct: 77  AIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMIS 136

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             +Q G   E L LF +M     EP+  TF  +L++C Y  L  E     H +  K   E
Sbjct: 137 AYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC-YGSLGFETGRQIHSIAIKRNYE 195

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMP 757
             +   S L+D   ++GR  +A  +   +P
Sbjct: 196 SHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 228/778 (29%), Positives = 373/778 (47%), Gaps = 108/778 (13%)

Query: 161 TLAPLLKLCLSSGY--VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           T + L +LC  +G   +   +  H   L  G +   FVS  L+ +Y++ G    A+ +FD
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 219 GMQERDVVLWKVMLRAYAENG--------FG-----------------------EEVFHL 247
            M  RD V W  ML AYA  G        FG                        +   L
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 248 FVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYNN----------- 293
            V++ R G+ PD  ++  +L   G + DL      Q+ A A+K  L  +           
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLAL--GVQIHAVAVKTGLEMDVRAGSALVDMY 181

Query: 294 -----------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                              N V W   ++G +Q       +E FV M R  +      + 
Sbjct: 182 GKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYA 241

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS- 395
               + A    L+  +Q+H   +K+ F +  +VG +++++Y+K   +   R   F+L + 
Sbjct: 242 SVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNH 301

Query: 396 VLRASSSL----------PEGLHLSK-------------------------------QIH 414
            ++A +++           E L L +                               Q+H
Sbjct: 302 TVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
             AIK+    D  V  A++D+Y +  ++ EA  +F+  +  D  +WNA+I     +    
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
             +   + M   G   D+ T  + +KAC  L  L+ G  +H  A+KSG  LD  VSS ++
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY KCG + +AQ + + I   + V+W ++ISG   N + + A   + +M   GV PD F
Sbjct: 482 DMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T+A ++   + L  +E G+QIH  +IK +   D ++  +LVDMYAKCGN+ D+ ++F++ 
Sbjct: 542 TYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA 601

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              + V WNAM+ G A HG G E L++FE M+   V P+  TF+ VL ACS+ GL+ +  
Sbjct: 602 QKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGC 661

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             F+LM  +Y +EP++EH++ +VD LGR+   +EA + I SMP EA A + + LL  C++
Sbjct: 662 RYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKI 721

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           + D E  +  A  ++ L+P DSS Y+LLSN++A + +W DV+  R  M++  +KK+P 
Sbjct: 722 RQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 779



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 199/704 (28%), Positives = 315/704 (44%), Gaps = 109/704 (15%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S L  G++ HAR+L S  +P  F++N L+ MY+RCG   +AR +FD MP RD +SWN++L
Sbjct: 18  SALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTML 77

Query: 127 AAYAHSGEGNA----------------ENVTEGFRLFRSLRESITFT----------SRL 160
            AYAH+G+  A                  +  G+      R+S+  +           R 
Sbjct: 78  TAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRT 137

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           TLA LLK C     +     +H  A+K GL  D     ALV++Y K   + +A   F GM
Sbjct: 138 TLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGM 197

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC---PDDESVQCVLGVISDLGKRH 277
            ER+ V W   +    +N        LFV + R GL    P   SV      I+ L    
Sbjct: 198 GERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLST-- 255

Query: 278 EEQVQAYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQ 309
             Q+ A+AIK             + +Y                 N  V   N  + G ++
Sbjct: 256 ARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVR 315

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A++ F  M RS + +D V+     +A A       G Q+H   +KSGF   V V
Sbjct: 316 TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCV 375

Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
            N+++++Y K   +                                            G+
Sbjct: 376 RNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGM 435

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             D FT  SVL+A + L + L     +H  AIK+    D+FVS+ ++D+YC+ G + EA+
Sbjct: 436 EPDDFTYGSVLKACAGL-QSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQ 494

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            L +   G +L +WN++I G+ L+  S +A + FS M   G + D  T AT +  C  L 
Sbjct: 495 KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLA 554

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++ GKQ+H   +K     D  +SS ++DMY KCG M D+  +F      D V+W  MI 
Sbjct: 555 TIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMIC 614

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ---IHANLIKLD 623
           G   +G+   AL ++ +M+ + VVP+  TF  +++A S +  L+ G +   +  +  KL+
Sbjct: 615 GYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLE 674

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
              + F    +VD+  +    ++A    + M +  + V+W  +L
Sbjct: 675 PQLEHFA--CMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLL 716



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 258/620 (41%), Gaps = 90/620 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      DL LG   HA  + +    D    + L+ MY +C SL  A R F  M +R+
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            +SW + +A    +     E  T G  LF  ++      S+   A + + C +   +  +
Sbjct: 202 SVSWGAAIAGCVQN-----EQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTA 256

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H +A+K     D  V  A+V++Y+K   + +A+  F  +    V     M+      
Sbjct: 257 RQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRT 316

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQ-------------------------------CVL 267
           G G E   LF  + RSG+  D  S+                                CV 
Sbjct: 317 GLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVR 376

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
             I DL  + +  V+AY +   +   +S  V WN  ++   Q       I     M+R  
Sbjct: 377 NAILDLYGKCKALVEAYLVFQEMEQRDS--VSWNAIIAALEQNECYEDTIAYLNEMLRYG 434

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--- 384
           ++ D  T+   L A AG  +L  G  +HG  +KSG      V +++++MY K G +    
Sbjct: 435 MEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQ 494

Query: 385 ----------------------------------------GLRTDQFTLASVLRASSSLP 404
                                                   G++ D FT A+VL   ++L 
Sbjct: 495 KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLA 554

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             + L KQIH   IK + + D ++S+ L+D+Y + G+M ++  +FE     D  +WNAMI
Sbjct: 555 T-IELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMI 613

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY L     +ALE+F  M  +    +  T    ++AC  + +L  G + + Y M S ++
Sbjct: 614 CGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCR-YFYLMTSRYK 672

Query: 525 LDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA-LSI 580
           L+  +   + ++D+  +     +A      +P   D V W T++S C    + ++A  + 
Sbjct: 673 LEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAA 732

Query: 581 YHQMRLSGVVPDEFTFAILV 600
            + +RL    PD+ +  IL+
Sbjct: 733 SNVLRLD---PDDSSVYILL 749



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 111/217 (51%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+       L  G   H + + S    D F+++ ++ MY +CG +  A++L D++  +
Sbjct: 444 SVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQ 503

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L+SWNSI++ ++ + +       E  + F  + +        T A +L  C +   +  
Sbjct: 504 ELVSWNSIISGFSLNKQSE-----EAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIEL 558

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  +K  ++ DE++S  LV++Y+K G + ++  +F+  Q+ D V W  M+  YA 
Sbjct: 559 GKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYAL 618

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G G E   +F  + ++ + P+  +   VL   S +G
Sbjct: 619 HGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVG 655



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 22/217 (10%)

Query: 22  SFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILN 81
           S  K +      FS  L   ++  HF+       + ++L    + + + LGK  H +I+ 
Sbjct: 516 SLNKQSEEAQKFFSEMLDIGVKPDHFT-------YATVLDTCANLATIELGKQIHGQIIK 568

Query: 82  SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
              + D ++++ L+ MY++CG++  +  +F+K    D +SWN+++  YA  G+G      
Sbjct: 569 QEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQG-----F 623

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFV 196
           E   +F  ++++    +  T   +L+ C     L  G  +       Y L+  L  + F 
Sbjct: 624 EALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQL--EHF- 680

Query: 197 SGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML 232
              +V+I  +    +EA KF+     E D V+WK +L
Sbjct: 681 -ACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLL 716


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 268/956 (28%), Positives = 446/956 (46%), Gaps = 118/956 (12%)

Query: 38   LLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMT 96
            +L F +K     +   +  FS +  A S++  L  GK+ H  ++ +  +  + + N ++ 
Sbjct: 111  VLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAG-METQVVGNAIVN 169

Query: 97   MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRES-I 154
            +Y +CG +  A+ +F+++P+R+L+SWN+++AA A +G   +A  V +   L  S+R +  
Sbjct: 170  LYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDA 229

Query: 155  TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
            TF S +     L L L  G     ++ H   ++ G     FV  +LVN+Y K G +  A+
Sbjct: 230  TFVSVVDACSNL-LDLPRG-----KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHAR 283

Query: 215  FLFDGMQERDVVL---WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
             +F+ M+ RDV+    W V++ A+A NG   E F LF  +   G+ P+  +   VL   +
Sbjct: 284  LVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACT 343

Query: 272  DLGKRHEEQVQAYAIKLLL---------------------------YNNNSNVVLWNKKL 304
             L +  +   +   + L L                             ++ NVV W   +
Sbjct: 344  TLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMI 403

Query: 305  SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
              Y Q G    A + +  M   + + ++VTF+  + +    ++L   +QIH   + SGF 
Sbjct: 404  WAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFE 460

Query: 365  SAVIVGNSLINMYSKMGCV-----------------------------C----------- 384
            S V++   L+ MY K G V                             C           
Sbjct: 461  SDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERM 520

Query: 385  ---GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
               G + D+ T  +VL A  S+ E    +    +         D     A +  Y R GS
Sbjct: 521  LLEGTKPDKITYLAVLDACQSVSEARRYAATFELEL-------DIAARNAAVSAYARCGS 573

Query: 442  MAEAEYLFENKDGFDLA-TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            + EA+  F+     + A TWNAMI G      S +ALE F  M   G R + +T   +++
Sbjct: 574  LKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLE 633

Query: 501  ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
            AC  L  L +G+Q+HA  +      +  +S+ +++MY KCG++ +A   F  +P  D ++
Sbjct: 634  ACSSLKDLTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFVKMPERDVIS 692

Query: 561  WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL- 619
            W TMI+    +G    AL  + QM L G  PD  T+   + A   + +L  G+ IH+ + 
Sbjct: 693  WNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVA 752

Query: 620  IKLDC-SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
                C   DP V  +LV MYA+CG++ DA  +F +   RN V W+ ++   AQHG   E 
Sbjct: 753  TAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEA 812

Query: 679  LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN-FHLMREKYGIEPEVEHYSFLV 737
            L LF +M+  G +PD++TF  +++ACS  G+V +     F  +   Y +    EHY  +V
Sbjct: 813  LDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMV 872

Query: 738  DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD-S 796
            + LGRAG+ +EA  LI  MP +AS ++  ALL AC  +GD E G   A +   L+P   +
Sbjct: 873  EVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQLDPGSFA 932

Query: 797  SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGG---YVP 853
            ++  +L+ ++ AA +W+D    R  ++ +N +++P    + +V   +    E       P
Sbjct: 933  ASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRVHEFGEDDDRLQGP 992

Query: 854  DTDFVL--------LDVEE-----EEKERALYY---HSEKLARAYGLISTPPSSVI 893
              D +         L VEE     +E  RA      HSEK+A  +G++STP   +I
Sbjct: 993  RLDKIRGELQRLSSLAVEEGGICKDENARAHILGCCHSEKVAIGFGIVSTPAGQLI 1048



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 201/754 (26%), Positives = 350/754 (46%), Gaps = 99/754 (13%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSS-SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           N  +  LSL   + +   SS S   +++ S+L+          GK  H  IL+S    +R
Sbjct: 2   NPAATELSLQTHINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNR 61

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           +L N+L+ MY++CG L  A  +F+ +P  ++ SW +++ AYA  G     ++ E    FR
Sbjct: 62  YLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEG-----HLREVLGFFR 116

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            ++   T       + +L  C S+G +   + +H   +  G+   + V  A+VN+Y K G
Sbjct: 117 KMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGME-TQVVGNAIVNLYGKCG 175

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF--VDLHRSGLCPDDESVQCV 266
           ++ EAK +F+ + ER++V W  ++ A A+NG  ++   +F  +DL  S + P+D +   V
Sbjct: 176 RVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGS-VRPNDATFVSV 234

Query: 267 LGVISDL-----GKRHEEQVQAYAIKLLLYNNNSNVVLWNK--------------KLSGY 307
           +   S+L     GK   E++        L+  NS V ++ K              +L   
Sbjct: 235 VDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDV 294

Query: 308 LQV----------GDNHGAIECFV---NMIRSNVQYDSVTFLVALAA---VAGTDNL--- 348
           L V            N   +E FV    M    V  + VTF+  L A   +A  + +   
Sbjct: 295 LSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFAR 354

Query: 349 --NLGQQIHGTTLKSGFYSA----------------------VIVGNSLI---------- 374
             +LG ++  TTL + F S                       V+    +I          
Sbjct: 355 VKHLGLELD-TTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIR 413

Query: 375 ---NMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
              ++Y +M C     T    + S LR     PE L  ++QIH H + +   +D  +   
Sbjct: 414 AAFDLYKRMDCEPNAVTFMAVMDSCLR-----PEDLPRAEQIHAHMVASGFESDVVLQVC 468

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+ +Y + GS+  A  +FEN     +  WN+M+  +  +    ++L+L+  M   G + D
Sbjct: 469 LVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPD 528

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +IT    + AC      +   +   YA     ELD+   +  +  Y +CG++ +A++ F+
Sbjct: 529 KITYLAVLDAC------QSVSEARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFD 582

Query: 552 DIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
            I   ++ V W  MISG   +GE   AL  + +M L GV  +  T+   ++A S L  L 
Sbjct: 583 AIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLT 642

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +GRQ+HA ++ L+   +  +  ++++MY KCG++++A   F +M  R+ + WN M+   A
Sbjct: 643 RGRQLHARIL-LENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYA 701

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           QHG+G + L+ F+ M   G  PD  T++G + AC
Sbjct: 702 QHGSGRQALEFFKQMDLEGWTPDRATYLGAIDAC 735



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 254/574 (44%), Gaps = 69/574 (12%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV  W   ++ Y + G     +  F  M     + D+  F   L A +    LN G+ IH
Sbjct: 91  NVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIH 150

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------C- 384
              + +G  + V VGN+++N+Y K G V                              C 
Sbjct: 151 DCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCK 209

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                         +R +  T  SV+ A S+L + L   K  H   I+    +  FV  +
Sbjct: 210 DAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLD-LPRGKSTHERIIRTGFDSYLFVGNS 268

Query: 432 LIDVYCRNGSMAEAEYLFEN---KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           L+++Y + GS+  A  +FE    +D   + +W  +I  +  + +  +A  LF  M   G 
Sbjct: 269 LVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGV 328

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             +++T  T ++AC     L Q +++ A     G ELD  + +  +  + K G +  A+ 
Sbjct: 329 LPNKVTFVTVLRAC---TTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARD 385

Query: 549 IFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           +F ++ +  +V +WT MI      G    A  +Y +M      P+  TF  ++   SCL 
Sbjct: 386 VFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVM--DSCLR 440

Query: 608 A--LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
              L +  QIHA+++     SD  + + LV MY KCG+++ A+ +F+ +  R+ V WN+M
Sbjct: 441 PEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSM 500

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           L   A +G  E +LKL+E M   G +PD +T++ VL AC     VSEA          + 
Sbjct: 501 LSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQS---VSEARR----YAATFE 553

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           +E ++   +  V A  R G  KEA     ++ ++ +A    A++      G+++      
Sbjct: 554 LELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECF 613

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
            K M LE   +++   L+++  A +   D+T  R
Sbjct: 614 WK-MELEGVRANSVTYLASL-EACSSLKDLTRGR 645



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 129/239 (53%), Gaps = 5/239 (2%)

Query: 471 NNSHKALELFSHMH---TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           N +   L L +H++    S E L     A+ ++ C        GK +H + + SG  ++ 
Sbjct: 2   NPAATELSLQTHINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNR 61

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            + + ++ MY KCG + DA  +F  +P P+  +WT +I+     G     L  + +M+L 
Sbjct: 62  YLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLD 121

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G  PD F F+ ++ A S   AL +G+ IH + + L       VG ++V++Y KCG + +A
Sbjct: 122 GTKPDAFVFSTVLTACSSAGALNEGKAIH-DCVVLAGMETQVVGNAIVNLYGKCGRVHEA 180

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACS 705
             +F+++  RN V WNA++   AQ+G+ ++ +++F+ M   G V P+  TF+ V+ ACS
Sbjct: 181 KAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACS 239



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 2/176 (1%)

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
           +Q++ S        +A L++  +   +   G+ +H +++   C  + ++   L+ MYAKC
Sbjct: 15  NQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKC 74

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G ++DA  +F+ +   N   W A++   A+ G+  E L  F  M+  G +PD+  F  VL
Sbjct: 75  GCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVL 134

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +ACS  G ++E  +  H      G+E +V   + +V+  G+ GR  EA  +   +P
Sbjct: 135 TACSSAGALNEG-KAIHDCVVLAGMETQVVGNA-IVNLYGKCGRVHEAKAVFERLP 188


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/580 (36%), Positives = 322/580 (55%), Gaps = 49/580 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D FT   VL+A + + +   L  ++H   +K    AD+FV  +LI++Y + G +  
Sbjct: 103 GLSPDSFTFPFVLKACARVLDS-ELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDN 161

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F++    + A+W A I GY+      +A+++F  +   G R D  ++   + AC  
Sbjct: 162 AFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKR 221

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
              L+ G+ +  Y  ++G   ++ V++ ++D Y KCG M  A+S+F+ +   + V+W++M
Sbjct: 222 TGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSM 281

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   NG    AL ++ +M   G+ PD +    ++ + + L ALE G    +NLI  + 
Sbjct: 282 IQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG-DWASNLINGNE 340

Query: 625 SSDPFV-GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             D  V G +L+DMYAKCG ++ A+ +F+ M  ++ V+WNA + GLA  G+ ++ L LF 
Sbjct: 341 FLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFG 400

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M+  G++PD  TF+G+L AC++ GLV E    F+ M   + + PE+EHY  +VD LGRA
Sbjct: 401 QMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRA 460

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G   EA +LI SMP EA+A +  ALLG CR+  DT+  + V +KL+ALEP+ S  YVLLS
Sbjct: 461 GCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLS 520

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           NI+AA+++W++    R  M  + VKK P                       ++ I+AK+ 
Sbjct: 521 NIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLG 580

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVIL------ 894
            L K +K  GYVP TD VL D+EEEEKE  +  HSEKLA A+GLIST P+  IL      
Sbjct: 581 ELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLR 640

Query: 895 ---------------SNKEPLYA--NRFHHLRDGMCPCAD 917
                          + +E +    NRFH   DG+C C D
Sbjct: 641 VCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKD 680



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 1/346 (0%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K IH   ++     D+++   ++      G+   +  + +     ++  +N MI G +L+
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           +   +++E++  M   G   D  T    +KAC  +L  + G +MH+  +K+G E D  V 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++++Y KCG + +A  +F+DIP  +  +WT  ISG V  G+   A+ ++ ++   G+ 
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD F+   ++ A      L  G  I   + +     + FV  +LVD Y KCGN+E A  +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  +N V W++M+ G A +G  +E L LF  M   G++PD    +GVL +C+  G +
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGAL 326

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
                  +L+     ++  V   + L+D   + GR   A E+   M
Sbjct: 327 ELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGM 371



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 209/473 (44%), Gaps = 54/473 (11%)

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
           H+   L R GL  D   +  VL    + G  +      Y+ ++L      N+ L+N  + 
Sbjct: 28  HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTN------YSFRILDQTKEPNIFLFNTMIR 81

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           G +       +IE + +M +  +  DS TF   L A A   +  LG ++H   +K+G  +
Sbjct: 82  GLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141

Query: 366 AVIVGNSLINMYSKMGCV------------------------------C----------- 384
              V  SLIN+Y+K G +                              C           
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201

Query: 385 --GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             GLR D F+L  VL A     + L   + I  +  +N  V + FV+TAL+D Y + G+M
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGD-LRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM 260

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  +F+     ++ +W++MI GY  +    +AL+LF  M   G + D   +   + +C
Sbjct: 261 ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC 320

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             L  L+ G         + F  +  + + ++DMY KCG M  A  +F  +   D V W 
Sbjct: 321 ARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWN 380

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
             ISG   +G    AL ++ QM  SG+ PD  TF  L+ A +    +E+GR+ + N ++ 
Sbjct: 381 AAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR-YFNSMEC 439

Query: 623 DCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
             +  P +     +VD+  + G +++A+ L K M M  N ++W A+L G   H
Sbjct: 440 VFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 170/390 (43%), Gaps = 41/390 (10%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           LK  K +HA  ++ G + D  + + +L      G    +  I +    P+   + TMI G
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            V N     ++ IYH MR  G+ PD FTF  ++KA + +   E G ++H+ ++K  C +D
Sbjct: 83  LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FV ISL+++Y KCG I++A+ +F  +  +N   W A + G    G   E + +F  +  
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202

Query: 688 HGVEPDSVTFIGVLSACSYTG------LVSEAYENFHLMR---------EKYG------- 725
            G+ PDS + + VLSAC  TG       + E      ++R         + YG       
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMER 262

Query: 726 --------IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG---ACRV 774
                   +E  +  +S ++      G  KEA +L   M  E       A++G   +C  
Sbjct: 263 ARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCAR 322

Query: 775 QGDTETGKWVAEKLMALEPFDSSAY-VLLSNIFAAANQWDDVTSA-RGEMKRKNVKKDPA 832
            G  E G W +  +   E  D+S     L +++A   + D      RG  K+  V  + A
Sbjct: 323 LGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAA 382

Query: 833 DLIFA------KVEGLIKRIKEGGYVPDTD 856
               A         GL  ++++ G  PD +
Sbjct: 383 ISGLAMSGHVKDALGLFGQMEKSGIKPDRN 412



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 17/307 (5%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D  LG   H+ ++ +    D F+  +L+ +Y++CG +  A ++FD +PD++
Sbjct: 114 VLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKN 173

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
             SW + ++ Y   G+       E   +FR L E        +L  +L  C  +G + + 
Sbjct: 174 FASWTATISGYVGVGK-----CREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG 228

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E +  Y  + G+V + FV+ ALV+ Y K G +  A+ +FDGM E+++V W  M++ YA N
Sbjct: 229 EWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASN 288

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS--- 295
           G  +E   LF  +   GL PD      ++GV+    +    ++  +A  L+  N N    
Sbjct: 289 GLPKEALDLFFKMLNEGLKPD---CYAMVGVLCSCARLGALELGDWASNLI--NGNEFLD 343

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N VL    +  Y + G    A E F  M +     D V +  A++ +A + ++     + 
Sbjct: 344 NSVLGTALIDMYAKCGRMDRAWEVFRGMRKK----DRVVWNAAISGLAMSGHVKDALGLF 399

Query: 356 GTTLKSG 362
           G   KSG
Sbjct: 400 GQMEKSG 406



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 192/462 (41%), Gaps = 75/462 (16%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   L++GL  D ++   ++     FG    +  + D  +E ++ L+  M+R    N  
Sbjct: 29  IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVI-----SDLG-KRHEEQVQAYA-----IKLL 289
            +E   ++  + + GL PD  +   VL        S+LG K H   V+A       +K+ 
Sbjct: 89  FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148

Query: 290 LYN------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
           L N                   + N   W   +SGY+ VG    AI+ F  ++   ++ D
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--- 388
           S + +  L+A   T +L  G+ I     ++G    V V  +L++ Y K G +   R+   
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268

Query: 389 -----DQFTLASVLR--ASSSLP-EGLHLSKQIHVHAIKNDTVA---------------- 424
                +  + +S+++  AS+ LP E L L  ++    +K D  A                
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328

Query: 425 ---------------DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
                          +S + TALID+Y + G M  A  +F      D   WNA I G  +
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAM 388

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S +   AL LF  M  SG + D  T    + AC    ++++G++ +  +M+  F L   +
Sbjct: 389 SGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR-YFNSMECVFTLTPEI 447

Query: 530 S--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
                ++D+  + G + +A  +   +P   + + W  ++ GC
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 15/206 (7%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L     T DL  G+     I  +  + + F+   L+  Y +CG++  AR +FD M +++
Sbjct: 215 VLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKN 274

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           ++SW+S++  YA +G        E   LF  +           +  +L  C   G +   
Sbjct: 275 IVSWSSMIQGYASNGLPK-----EALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG 329

Query: 176 -WASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            WAS  ++G         D  V G AL+++Y+K G++  A  +F GM+++D V+W   + 
Sbjct: 330 DWASNLINGNEF-----LDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAIS 384

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPD 259
             A +G  ++   LF  + +SG+ PD
Sbjct: 385 GLAMSGHVKDALGLFGQMEKSGIKPD 410



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 38/222 (17%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L++  SCL  L   + IHA L++L    D ++   ++      GN   ++ +  Q    N
Sbjct: 16  LIQGFSCLKHL---KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPN 72

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
             L+N M+ GL  +   +E+++++  M+  G+ PDS TF  VL AC+   L SE     H
Sbjct: 73  IFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV-LDSELGVKMH 131

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS--------------- 763
            +  K G E +      L++   + G    A ++   +P +  AS               
Sbjct: 132 SLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCR 191

Query: 764 ----MHRAL---------------LGACRVQGDTETGKWVAE 786
               M R L               L AC+  GD  +G+W+ E
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDE 233


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 203/555 (36%), Positives = 311/555 (56%), Gaps = 48/555 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK   +   ++ T LI +Y +   + +A  +F+     ++ +W AMI  Y   
Sbjct: 110 QRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQR 169

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             + +AL LF  M  S    +  T AT + +C   L  + G+Q+H+ A+K  +E  + V 
Sbjct: 170 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG 229

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K G + DA  +F+ +P  D VA T +ISG    G ++ AL ++ Q+++ G+ 
Sbjct: 230 SSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMN 289

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  T+A ++ A S L AL  G+Q+H+++++    S   +  SL+DMY+KCGN+  A  +
Sbjct: 290 SNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRI 349

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
           F  M  R  + WNAMLVG ++HG   E L+LF+ M+    V+PDS+T++ VLS CS+  L
Sbjct: 350 FDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQL 409

Query: 710 VSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
                E F+ ++  K GIEP++ HY  +VD LGRAGR +EA + I  MPF  +A++  +L
Sbjct: 410 EDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSL 469

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LG+CRV  D E G  V +KL+ LEP ++  YV+LSN++A+A +W+D+ + R  M+ K V 
Sbjct: 470 LGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVT 529

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                        + +  KV+ L  + KE GYVPD   VL DV+EE
Sbjct: 530 KEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEE 589

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA-------- 902
           +KE+ L  HSEKLA A+GLI+TP  + I   K                 LYA        
Sbjct: 590 QKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDK 649

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH++  G+C C D
Sbjct: 650 NRFHNIVGGVCSCGD 664



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 147/275 (53%), Gaps = 3/275 (1%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T +  C     +++G+++H + +K+ +   + + + ++ +Y KC  + DA+ +F+++P  
Sbjct: 95  TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + V+WT MIS     G    AL+++ +M  S   P+ FTFA ++ +       E GRQIH
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           +  IK +  S  FVG SL+DMYAK G I DA+ +F  +  R+ V   A++ G AQ G  E
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSF 735
           E LKLF  ++  G+  +SVT+  VL+A S    ++   + + H++R   G    V   + 
Sbjct: 275 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS--GQYSYVVLLNS 332

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           L+D   + G    A  +  SMP     S +  L+G
Sbjct: 333 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 367



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 43/359 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +IL   +S   +  G+  H  ++ +  +P  +L   L+ +Y++C  L  AR +FD+MP +
Sbjct: 95  TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW ++++AY+  G        E   LF  +  S T  +  T A +L  C  S     
Sbjct: 155 NVVSWTAMISAYSQRG-----FAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET 209

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H  A+K       FV  +L+++Y+K G+I +A  +F  + ERDVV    ++  YA+
Sbjct: 210 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQ 269

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK--------- 287
            G  EE   LF  L   G+  +  +   VL  +S L    H +QV ++ ++         
Sbjct: 270 MGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVL 329

Query: 288 ----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN- 327
               + +Y+   NV               + WN  L GY + G     +E F  M   N 
Sbjct: 330 LNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENK 389

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           V+ DS+T+L  L+  +     ++G +I        FY+ V   + +       GCV  L
Sbjct: 390 VKPDSITYLAVLSGCSHGQLEDMGLEI--------FYNMVNGKDGIEPDIGHYGCVVDL 440



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 189/454 (41%), Gaps = 94/454 (20%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L  C+S   +   + VH + +K   +   ++   L+ +Y+K   + +A+ +FD M +++
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKN 155

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQA 283
           VV W  M+ AY++ GF  E  +LFV++ RS   P+  +   +L      LG     Q+ +
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 215

Query: 284 YAIK-------------LLLYNNNS---------------NVVLWNKKLSGYLQVGDNHG 315
            AIK             L +Y  +                +VV     +SGY Q+G +  
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A++ F  +    +  +SVT+   L A++G   LN G+Q+H   L+SG YS V++ NSLI+
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 335

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MYSK G VC  R          R   S+PE   +S                         
Sbjct: 336 MYSKCGNVCYAR----------RIFDSMPERTCIS------------------------- 360

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEIT 494
                                   WNAM+ GY     + + LELF  M    + + D IT
Sbjct: 361 ------------------------WNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 396

Query: 495 IATAVKACGCLLMLKQGKQMHAYAM---KSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
               +  C    +   G ++  Y M   K G E D+     ++D+  + G + +A     
Sbjct: 397 YLAVLSGCSHGQLEDMGLEIF-YNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIK 455

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +P  P    W +++  C  + + ++ + +  ++
Sbjct: 456 KMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKL 489



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 6/116 (5%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +S+S  + S+L      + L  GK  H+ +L S Q     L N+L+ MYS+CG++ YARR
Sbjct: 289 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 348

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR----ESITFTSRLT 161
           +FD MP+R  ISWN++L  Y  S  G A  V E F+L R       +SIT+ + L+
Sbjct: 349 IFDSMPERTCISWNAMLVGY--SKHGMAREVLELFKLMREENKVKPDSITYLAVLS 402


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 315/592 (53%), Gaps = 51/592 (8%)

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           S  N +++  C+    ++  +L     A  ++  G  L  Q+ +     DTV    ++T 
Sbjct: 60  SCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV----IATK 115

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+++YC   S++ A  LF+     ++  WN +I GY  +     A++L+  M   G   D
Sbjct: 116 LVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPD 175

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             T    +KAC  L  ++ G+++H + +++G+E D+ V + ++DMY KCG +  A+ +F+
Sbjct: 176 NFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            I   D V W +M++    NG  D  LS+  +M L+G+ P E T    + AS+   AL Q
Sbjct: 236 KILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQ 295

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           GR++H    + +  S   V  +LVDMYAKCG++  A  LF+++ ++  V WNAM+ G A 
Sbjct: 296 GRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAM 355

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG+  E L LFE+M     +PD +TF+GVLSACS+ GL+ E +  F  M   Y I+P V+
Sbjct: 356 HGHATEALDLFEEMN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQ 414

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LG +GR  EA  LI+ M     + +  ALL +C++  + E G+   E+L+ L
Sbjct: 415 HYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIEL 474

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
           EP D+  YV+LSNI+A A +W+ V   R  M  + +KK  A                   
Sbjct: 475 EPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTS 534

Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
               D I++++E +   +KE GY P T  V  DVE++EK   +  HSE+LA A+GLISTP
Sbjct: 535 HPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTP 594

Query: 889 PSSVILSNK-----EPLY------------------ANRFHHLRDGMCPCAD 917
           P + +L  K     E  +                   NR+HH +DG+C C D
Sbjct: 595 PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGD 646



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 38/357 (10%)

Query: 36  LSLLPFLQKSHFSSS---SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           L  +P     H  S+    + S + S+L+  I+   +  GK  HA++  +    D  +  
Sbjct: 55  LKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIAT 114

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
            L+ +Y  C SL  AR LFD++P  ++  WN ++  YA +G   A       +L+  + +
Sbjct: 115 KLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEA-----AVQLYYQMFD 169

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                   T   +LK C +   +     +H + ++ G   D FV  AL+++Y+K G +  
Sbjct: 170 YGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGS 229

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ +FD +  RD VLW  ML AY++NG  +    L  ++  +GL P + ++   +   +D
Sbjct: 230 AREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASAD 289

Query: 273 ------------LGKRHE----EQVQAYAIKLLLYNNN-------------SNVVLWNKK 303
                       L  R E    ++V+   + +     +               VV WN  
Sbjct: 290 NAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAM 349

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           ++GY   G    A++ F  M R   + D +TF+  L+A +    L  G     T ++
Sbjct: 350 ITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIR 405



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 55/322 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+ LWN  + GY   G    A++ +  M    +  D+ TF   L A A    +  G++IH
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
              +++G+   V VG +LI+MY+K GCV                                
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPD 259

Query: 384 -----------CGLRTDQFTLASVLRAS---SSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                       GLR  + TL + + AS   ++LP+G    +++H  + + +  +   V 
Sbjct: 260 ACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQG----RELHGLSWRQEFESHDKVK 315

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TAL+D+Y + GS+  A  LFE      + +WNAMI GY +  ++ +AL+LF  M+    +
Sbjct: 316 TALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-K 374

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQ 547
            D IT    + AC    +L++G  M    M   +++D  V   + ++D+    G + +A 
Sbjct: 375 PDHITFVGVLSACSHGGLLEEG-WMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAY 433

Query: 548 SIFNDIPA-PDDVAWTTMISGC 568
           ++   +   PD   W  +++ C
Sbjct: 434 NLIMQMKVLPDSGVWGALLNSC 455


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 229/712 (32%), Positives = 348/712 (48%), Gaps = 94/712 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           ++ L+N  + G+        +I  + ++ R +N+  D+ T+  A+AA +   +L L   +
Sbjct: 74  DIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---L 130

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------ 384
           H  ++  G+ S V VG++L+++Y K   V                               
Sbjct: 131 HAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCF 190

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G+R D  T+ +VL A++ L E L +   I   A+K       +V T 
Sbjct: 191 DDSIQLFREMVADGVRVDSSTVTAVLPAAAELQE-LKVGMGIQCLALKIGFGFCDYVLTG 249

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI +Y + G +  A  LF   +  DL  +NAMI G+  +  +  +++LF  +  SGER+ 
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVS 309

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             TI   +        L     +H + +KSG  L+  VS+    +Y K   +  A+ +F+
Sbjct: 310 SSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFD 369

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           + P    VAW  MISG   NG  + A+S++ +M  +   P+  T   ++ A + L +L  
Sbjct: 370 ESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSF 429

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+ +H  +   +   + +V  +LVDMYAKCGNI +A+ LF  M  +NTV WN M+ G   
Sbjct: 430 GKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGL 489

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G E LKL+ +M   G  P +VTF+ VL ACS+ GLV E  E FH M  KY IEP +E
Sbjct: 490 HGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIE 549

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGR+G+ ++A E I  MP E   ++   LLGAC +  DT+  +  +E+L  L
Sbjct: 550 HYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFEL 609

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
           +P     YVLLSNI++    +    S R  +K++ + K P                    
Sbjct: 610 DPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRS 669

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              A  I+AK+E L  +++E GY  +T   L DVEEEEKE A+  HSEKLA A+GLI+T 
Sbjct: 670 HSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTE 729

Query: 889 PSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           P + I   K                           ANRFHH +DG+C C D
Sbjct: 730 PGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGD 781



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 139/607 (22%), Positives = 265/607 (43%), Gaps = 91/607 (14%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           S   S +  FS++  A +   L     THA+ ILN  +     LT     ++    +  +
Sbjct: 7   SGKLSRNTLFSLINKASTFPHL---AQTHAQFILNGYRFDLATLTKLTQKLFDFSATR-H 62

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTLAPL 165
           AR LF  +P  D+  +N ++  ++ +     ++ +    L+  LR +   +    T A  
Sbjct: 63  ARALFFSVPKPDIFLFNVLVRGFSLN-----DSPSSSISLYTHLRRNTNLSPDNFTYAFA 117

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           +  C +  ++     +H +++  G   + FV  ALV++Y KF ++  A+ +FDGM ERD 
Sbjct: 118 VAACSNDKHLM---LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDT 174

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAY 284
           VLW  M+    +N   ++   LF ++   G+  D  +V  VL   ++L + +    +Q  
Sbjct: 175 VLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCL 234

Query: 285 AIKL--------------------------LLYN--NNSNVVLWNKKLSGYLQVGDNHGA 316
           A+K+                          LL+   N  +++ +N  +SG+   G    +
Sbjct: 235 ALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECS 294

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY------------ 364
           ++ F  ++ S  +  S T +  +   +   +L+L   IHG  +KSG              
Sbjct: 295 VKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAI 354

Query: 365 -------------------SAVIVGNSLINMYSKMGCV------------CGLRTDQFTL 393
                                V+  N++I+ Y++ G                   +  T+
Sbjct: 355 YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENK 452
            ++L A + L   L   K +H H IK++ +  + +VSTAL+D+Y + G+++EA  LF++ 
Sbjct: 415 TTILSACAQLGS-LSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSM 472

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              +  TWN MIFGY L    H+AL+L++ M   G     +T  + + AC    ++ +G+
Sbjct: 473 SEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGE 532

Query: 513 QM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVD 570
           ++ H    K   E  +   + ++D+  + G +  A      +P  P    W T++  C+ 
Sbjct: 533 EIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMI 592

Query: 571 NGEEDLA 577
           + + D+A
Sbjct: 593 HKDTDIA 599



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           Q HA  + +G+  DL   + +        A   A+++F  +P PD   +  ++ G   N 
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 573 EEDLALSIY-HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
               ++S+Y H  R + + PD FT+A  V A S    L     +HA+ I     S+ FVG
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVFVG 146

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +LVD+Y K   +  A  +F  M  R+TVLWN M+ GL ++   +++++LF +M A GV 
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206

Query: 692 PDSVTFIGVLSACS 705
            DS T   VL A +
Sbjct: 207 VDSSTVTAVLPAAA 220



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 13/204 (6%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++SL   + K+ F+ ++ +    +IL        L  GK  H  I + +  P+ +++  L
Sbjct: 395 AISLFKEMMKTEFTPNAVTIT--TILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTAL 452

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY++CG++  A +LFD M +++ ++WN+++  Y   G G+     E  +L+  +    
Sbjct: 453 VDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGH-----EALKLYNEMLHLG 507

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL---KIGLVWDEFVSGALVNIYSKFGKIR 211
              S +T   +L  C  +G V   E +    +   +I  + + +    +V+I  + G++ 
Sbjct: 508 YNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY--ACMVDILGRSGQLE 565

Query: 212 EA-KFLFDGMQERDVVLWKVMLRA 234
           +A +F+     E    +W  +L A
Sbjct: 566 KALEFIKKMPVEPGPAVWGTLLGA 589


>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
 gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
          Length = 703

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 197/534 (36%), Positives = 297/534 (55%), Gaps = 25/534 (4%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMA 443
           GLR + FT  S  +A++S P    +  QIH  AI+   +  D FVS A +D+Y + G + 
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A +LF      ++  WNA++   +L     + +E +  +  +G   + ++      AC 
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
             + L  G+Q H + +K GFE+D+ V + ++D Y KC     A+++F+ +   + V+W +
Sbjct: 232 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 291

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           M++    NG E+ A + Y   R SG  P +F  +  +   + L  L  GR +HA  ++  
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             ++ FV  +LVDMY KCG +EDA  +F +   RN V WNAM+ G A  G+ +  L +F+
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411

Query: 684 DMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           DM   G   P+ +T + V+++CS  GL  + YE F  MRE++GIEP  EHY+ +VD LGR
Sbjct: 412 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 471

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  ++A E+I  MP   S S+  ALLGAC++ G TE G+  AEKL  L+P DS  +VLL
Sbjct: 472 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLL 531

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKV 839
           SN+FA+A +W + T  R EMK   +KKDP                        + I A +
Sbjct: 532 SNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALL 591

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
             L K+++  GY+PDT + L D+EEEEKE  ++ HSEKLA A+GLI  PP   I
Sbjct: 592 SKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPI 645



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 56/351 (15%)

Query: 16  TYVIFSSFTKDTYRNLPSFS-------LSLLP--FLQKSHFSSSSSSSQWFSILRHAIST 66
           +Y  F S      R LP+ S       L L P  F   S F +++S+    +I       
Sbjct: 84  SYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTI------- 136

Query: 67  SDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
                G   H+  +    +P D F++   + MY + G L  AR LF +MP+R++++WN++
Sbjct: 137 -----GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAV 191

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +      G        E    +  LRE+    + ++       C  + Y+   E  HG+ 
Sbjct: 192 MTNAVLDGRP-----LETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFV 246

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   D  V  ++V+ Y K     +A+ +FDGM  R+ V W  M+ AYA+NG  EE F
Sbjct: 247 VKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAF 306

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN----------- 293
             ++   RSG  P D  V   L   + L   H    + A A++  +  N           
Sbjct: 307 AAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMY 366

Query: 294 -----------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                              N+V WN  + GY  +GD   A+  F +MIRS 
Sbjct: 367 GKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG 417



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 181/477 (37%), Gaps = 81/477 (16%)

Query: 179 ETVHGYALK-IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              H  AL+ I      F+   LVN+YSK      A           VV +   +   A+
Sbjct: 35  RAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQ 94

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE--EQVQAYAIK-------- 287
           +G        F  + R GL P+D +        +    R     Q+ + AI+        
Sbjct: 95  HGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDP 154

Query: 288 ---------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                L     N NVV WN  ++  +  G     IE +  +  +
Sbjct: 155 FVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREA 214

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--- 383
               + V+      A AG   L+LG+Q HG  +K GF   V V NS+++ Y K  C    
Sbjct: 215 GGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKA 274

Query: 384 ----------------------------------------CGLRTDQFTLASVLRASSSL 403
                                                    G     F ++S L   + L
Sbjct: 275 RAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGL 334

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
             GLHL + +H  A+++   A+ FV++AL+D+Y + G + +AE +F      +L TWNAM
Sbjct: 335 -LGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAM 393

Query: 464 IFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           I GY    ++  AL +F  M  SGE   + IT+   + +C    + K G ++    M+  
Sbjct: 394 IGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE-TMRER 452

Query: 523 FELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDL 576
           F ++      + ++D+  + G    A  +   +P  P    W  ++  C  +G+ +L
Sbjct: 453 FGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTEL 509



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 509 KQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           + G+  HA A++     L   + + ++++Y K      A +     P P  V++T  ISG
Sbjct: 32  RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ-GRQIHANLIKLD-CS 625
              +G    ALS +  M   G+ P++FTF    KA++        G QIH+  I+     
Sbjct: 92  AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            DPFV  + +DMY K G ++ A  LF +M  RN V WNA++      G   ET++ +  +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 211

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR--- 742
           +  G  P+ V+     +AC+    +S   E FH    K G E +V   + +VD  G+   
Sbjct: 212 REAGGLPNVVSACAFFNACAGAMYLSLG-EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRC 270

Query: 743 AGRTK 747
           AG+ +
Sbjct: 271 AGKAR 275



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 16/181 (8%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG++ HA  + S    + F+ + L+ MY +CG +  A ++F + P R+L++WN+++  
Sbjct: 337 LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGG 396

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-- 186
           YAH G+  A+N    F     +R   T  + +TL  ++  C   G      T  GY L  
Sbjct: 397 YAHIGD--AQNALLVFD--DMIRSGETAPNYITLVNVITSCSRGGL-----TKDGYELFE 447

Query: 187 ----KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFG 241
               + G+         +V++  + G   +A  +  GM  R  + +W  +L A   +G  
Sbjct: 448 TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKT 507

Query: 242 E 242
           E
Sbjct: 508 E 508


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 214/642 (33%), Positives = 330/642 (51%), Gaps = 55/642 (8%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNL-GQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           ++RS++ + +  +   + A     N+ L    I G      F  AV V  S+        
Sbjct: 41  LLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQH----- 95

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
              G   D FT   VL+A + LP   H+   +H   IK     D FV T L+ +Y +NG 
Sbjct: 96  ---GFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGF 152

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           + +A  +F+     ++ +W A+I GYI S    +AL LF  +   G R D  T+   + A
Sbjct: 153 LTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYA 212

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  +  L  G+ +  Y  +SG   ++ V++ ++DMY KCG+M +A+ +F+ +   D V W
Sbjct: 213 CSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCW 272

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           + +I G   NG    AL ++ +M+   V PD +    +  A S L ALE G      +  
Sbjct: 273 SALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDG 332

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
            +  S+P +G +L+D YAKCG++  A  +FK M  ++ V++NA++ GLA  G+      +
Sbjct: 333 DEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGV 392

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M   G++PD  TF+G+L  C++ GLV + +  F  M   + + P +EHY  +VD   
Sbjct: 393 FGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQA 452

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG   EA +LI SMP EA++ +  ALLG CR+  DT+  + V ++L+ LEP++S  YVL
Sbjct: 453 RAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVL 512

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI++A+++WD+    R  + +K ++K P                       +  I+ K
Sbjct: 513 LSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEK 572

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           +E L K ++E GY P T+FVL DVEEEEKE  L  HSEKLA A+ LIST    VI     
Sbjct: 573 LESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKN 632

Query: 894 ----------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                           ++ +E +    NRFHH  +G C C D
Sbjct: 633 LRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRD 674



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 1/305 (0%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + LH +KQ H   ++     D+++   L+       +   A  +F      ++  +N +I
Sbjct: 14  KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI 73

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL-MLKQGKQMHAYAMKSGF 523
            G + ++    A+ +++ M   G   D  T    +KAC  L      G  +H+  +K+GF
Sbjct: 74  RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           + D+ V +G++ +Y K G + DA+ +F++IP  + V+WT +I G +++G    AL ++  
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           +   G+ PD FT   ++ A S +  L  GR I   + +     + FV  SLVDMYAKCG+
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           +E+A  +F  M  ++ V W+A++ G A +G  +E L +F +M+   V PD    +GV SA
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313

Query: 704 CSYTG 708
           CS  G
Sbjct: 314 CSRLG 318



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 151/307 (49%), Gaps = 16/307 (5%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +G S H+ ++ +    D F+   L+ +YS+ G L  AR++FD++P+++++SW +I+  Y 
Sbjct: 120 VGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYI 179

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            SG        E   LFR L E        TL  +L  C   G + +   + GY  + G 
Sbjct: 180 ESG-----CFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGS 234

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           V + FV+ +LV++Y+K G + EA+ +FDGM E+DVV W  +++ YA NG  +E   +F +
Sbjct: 235 VGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFE 294

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNVVLWNKKLSGYLQ 309
           + R  + PD  ++  V    S LG     ++  +A  L+  +   SN VL    +  Y +
Sbjct: 295 MQRENVRPDCYAMVGVFSACSRLGAL---ELGNWARGLMDGDEFLSNPVLGTALIDFYAK 351

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A E F  M R     D V F   ++ +A   ++     + G  +K G       
Sbjct: 352 CGSVAQAKEVFKGMRRK----DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPD--- 404

Query: 370 GNSLINM 376
           GN+ + +
Sbjct: 405 GNTFVGL 411



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 149/355 (41%), Gaps = 37/355 (10%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L Q KQ H   ++ G   D  + + +L   +   A   A  +F   P P+   + T+I G
Sbjct: 16  LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIHANLIKLDCSS 626
            V N     A+S+Y  MR  G  PD FTF  ++KA + L      G  +H+ +IK     
Sbjct: 76  MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D FV   LV +Y+K G + DA  +F ++  +N V W A++ G  + G   E L LF  + 
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE------------------KYG--- 725
             G+ PDS T + +L ACS  G ++        MRE                  K G   
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255

Query: 726 ---------IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG---ACR 773
                    +E +V  +S L+      G  KEA ++   M  E       A++G   AC 
Sbjct: 256 EARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACS 315

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYV--LLSNIFAAANQWDDVTSARGEMKRKN 826
             G  E G W A  LM  + F S+  +   L + +A              M+RK+
Sbjct: 316 RLGALELGNW-ARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKD 369



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 138/341 (40%), Gaps = 35/341 (10%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  H  +L      D +L N L+       +  YA  +F + P  ++  +N+++      
Sbjct: 20  KQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI-----R 74

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS-SGYVWASETVHGYALKIGLV 191
           G  + +   +   ++ S+R+        T   +LK C     Y     ++H   +K G  
Sbjct: 75  GMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFD 134

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           WD FV   LV +YSK G + +A+ +FD + E++VV W  ++  Y E+G   E   LF  L
Sbjct: 135 WDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGL 194

Query: 252 HRSGLCPDDESVQCVLGVISDLGK-----------RHEEQVQAYAIKLLLYNN------- 293
              GL PD  ++  +L   S +G            R    V    +   L +        
Sbjct: 195 LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSM 254

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        +VV W+  + GY   G    A++ F  M R NV+ D    +   +A 
Sbjct: 255 EEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSAC 314

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +    L LG    G      F S  ++G +LI+ Y+K G V
Sbjct: 315 SRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSV 355



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 23/213 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL       DL  G+     +  S  + + F+  +L+ MY++CGS+  ARR+FD M ++D
Sbjct: 209 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKD 268

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           ++ W++++  YA +G        E   +F  ++          +  +   C   G +   
Sbjct: 269 VVCWSALIQGYASNGMPK-----EALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELG 323

Query: 176 -WASETVHGYALKIGLVWDEFVSG-----ALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            WA   + G         DEF+S      AL++ Y+K G + +AK +F GM+ +D V++ 
Sbjct: 324 NWARGLMDG---------DEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFN 374

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            ++   A  G     F +F  + + G+ PD  +
Sbjct: 375 AVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNT 407


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 326/591 (55%), Gaps = 48/591 (8%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++++S++  V   + D FTL  V++A + L + L L + IH  A K D V+D FV  ALI
Sbjct: 192 MSIFSELISVTEHKPDNFTLPCVIKACAGLLD-LGLGQIIHGMATKMDLVSDVFVGNALI 250

Query: 434 DVYCRNGSMAEA-EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
            +Y + G + EA + +F+  D   +++WNA++ GY  +++  KAL+L+  M  SG   D 
Sbjct: 251 AMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDW 310

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            TI + + AC  +  L  G+++H +A+++G  +D  +   +L +Y+ CG    AQ +F+ 
Sbjct: 311 FTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDG 370

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +     V+W  MI+G   NG  D A++++ QM   G+ P E     +  A S L+AL  G
Sbjct: 371 MEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG 430

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +++H   +K   + D FV  S++DMYAK G I  +  +F ++  ++   WN ++ G   H
Sbjct: 431 KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIH 490

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G G+E L+LFE M   G++PD  TF G+L ACS+ GLV +  E F+ M   + IEP++EH
Sbjct: 491 GRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEH 550

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD LGRAGR  +A  LI  MP +  + +  +LL +CR+ G+   G+ VA KL+ LE
Sbjct: 551 YTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELE 610

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADLIF 836
           P     YVL+SN+FA + +WDDV   RG MK   ++KD                  D + 
Sbjct: 611 PEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEML 670

Query: 837 AKVEGLIK-------RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP- 888
            ++E + +       +I   GY PDT  VL D+EEE+K   L  HSEKLA ++GL++T  
Sbjct: 671 PELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAK 730

Query: 889 --PSSVI------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
             P  V                   + N++ +  +  RFHH RDG+C C D
Sbjct: 731 GLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGD 781



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 227/516 (43%), Gaps = 53/516 (10%)

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV-STALIDVYCRNGSMAEAEYLFENKDG 454
           VL  +    + + + +++H     +    + FV +T +I +Y   GS +++  +F+    
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQ 513
            +L  WNA++  Y  +     A+ +FS + +  E + D  T+   +KAC  LL L  G+ 
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA-QSIFNDIPAPDDVAWTTMISGCVDNG 572
           +H  A K     D+ V + ++ MY KCG + +A + +F+ +      +W  ++ G   N 
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           +   AL +Y QM  SG+ PD FT   L+ A S + +L  G +IH   ++   + DPF+GI
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           SL+ +Y  CG    A +LF  M+ R+ V WN M+ G +Q+G  +E + LF  M + G++P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409

Query: 693 DSVTFIGVLSACSYT-----------------------------------GLVSEAYENF 717
             +  + V  ACS                                     G +  +   F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL---ILSMPFEASASMHRALLGACRV 774
             +REK     +V  ++ ++   G  GR KEA EL   +L +  +        +L AC  
Sbjct: 470 DRLREK-----DVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 524

Query: 775 QGDTETGKWVAEKLMALEPFDSSA--YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
            G  E G     +++ L   +     Y  + ++   A + DD      EM       DP 
Sbjct: 525 AGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEM-----PGDPD 579

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
             I++ +    +     G        LL++E E+ E
Sbjct: 580 SRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPE 615



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 161/695 (23%), Positives = 288/695 (41%), Gaps = 124/695 (17%)

Query: 39  LPFLQKSH----FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN- 93
           L FLQ+        S+  S     +L+      D+ +G+  H  +  S+Q  + F+ N  
Sbjct: 87  LDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTR 146

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++TMYS CGS   +R +FDK+  ++L  WN+I++AY  +     E   +   +F  L   
Sbjct: 147 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRN-----ELFEDAMSIFSEL--- 198

Query: 154 ITFTSR----LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           I+ T       TL  ++K C     +   + +HG A K+ LV D FV  AL+ +Y K G 
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258

Query: 210 IREA-KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           + EA K +FD M  + V  W  +L  YA+N    +   L++ +  SGL PD  ++  +L 
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318

Query: 269 VISDLGKRH-EEQVQAYAIK-------------LLLY---------------NNNSNVVL 299
             S +   H  E++  +A++             L LY                 + ++V 
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 378

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  ++GY Q G    AI  F  M+   +Q   +  +    A +    L LG+++H   L
Sbjct: 379 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 438

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
           K+     + V +S+I+MY+K GC+                         LS++I     +
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCI------------------------GLSQRIFDRLRE 474

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
            D  +       +I  Y  +G   EA  LFE                        K L L
Sbjct: 475 KDVAS----WNVIIAGYGIHGRGKEALELFE------------------------KMLRL 506

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGIL 534
                  G + D+ T    + AC    +++ G     + ++ + ++   E   CV    +
Sbjct: 507 -------GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCV----V 555

Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPD 592
           DM  + G + DA  +  ++P  PD   W++++S C  +G   L   + ++ + L    P+
Sbjct: 556 DMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPE 615

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            +     + A S     +  R++   +  +    D   G S +++  K  N      +  
Sbjct: 616 NYVLISNLFAGS--GKWDDVRRVRGRMKDIGLQKD--AGCSWIEVGGKVHNFLIGDEMLP 671

Query: 653 QM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           ++ ++R T  W  + V ++  G   +T  +  D++
Sbjct: 672 ELEEVRET--WRRLEVKISSIGYTPDTGSVLHDLE 704


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 195/532 (36%), Positives = 296/532 (55%), Gaps = 46/532 (8%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI+ + ++G +  A  +F+     ++ATWNAM+ G I    +   L LF  MH  G   D
Sbjct: 29  LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E T+ + ++ C  L     GKQ+HAY +K G+E +L V S +  MY+K G++ + + +  
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +   + VAW T+I+G   NG  +  L +Y+ M++SG+ PD+ T   ++ +S+ L  L Q
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA  IK   +S   V  SL+ MY+KCG +ED+       +  ++VLW++M+     
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGF 268

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG GEE + LFE M+  G+  + VTF+ +L ACS+ GL  +    F LM EKYG++P +E
Sbjct: 269 HGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLE 328

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGR+G   EA  +I SMP EA   + + LL ACR+  + +     AE+++ L
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRL 388

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            P DS+ YVLLSNI A+A +W DV+  R  M+ +NVKK+P                    
Sbjct: 389 NPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKS 448

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              ++ I   ++ L++ +K  GYVPDT  V  D + EEKE +L  HSEKLA A+GL++ P
Sbjct: 449 HPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIP 508

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P S I                     ++N+E +    +RFHH + G C C D
Sbjct: 509 PGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGD 560



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 195/408 (47%), Gaps = 37/408 (9%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N++  N  ++G++Q GD   AI+ F  M+  NV   +       A V+G       +   
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWN-------AMVSGLIQFEFNE--- 71

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                +G +           ++ +M  + G   D+FTL SVLR  + L    +  KQ+H 
Sbjct: 72  -----NGLF-----------LFREMHEL-GFLPDEFTLGSVLRGCAGL-RASYAGKQVHA 113

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           + +K     +  V ++L  +Y ++GS+ E E + +     ++  WN +I G   + +   
Sbjct: 114 YVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEG 173

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
            L+L++ M  SG R D+IT+ + + +   L  L QG+Q+HA A+K+G    + V S ++ 
Sbjct: 174 VLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLIS 233

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG + D+     D   PD V W++MI+    +G  + A+ ++ QM   G+  ++ T
Sbjct: 234 MYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVT 293

Query: 596 FAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           F  L+ A S     E+G      +++   L    + +  +  VD+  + G +++A  + +
Sbjct: 294 FLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCV--VDLLGRSGCLDEAEAMIR 351

Query: 653 QMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFI 698
            M +  + V+W  +L     H N +   +  E++    + P DS T++
Sbjct: 352 SMPLEADVVIWKTLLSACRIHRNADMATRTAEEILR--LNPQDSATYV 397



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 211/532 (39%), Gaps = 118/532 (22%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L+N + + G +  A  +FD M ER+V  W  M+    +  F E    LF ++H  G  PD
Sbjct: 29  LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88

Query: 260 DESVQCVLGVISDLGKRHE-EQVQAYAIK----------------------------LLL 290
           + ++  VL   + L   +  +QV AY +K                            ++ 
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                NVV WN  ++G  Q G   G ++ +  M  S ++ D +T +  +++ A    L  
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           GQQIH   +K+G  SAV V +SLI+MYSK GC+                           
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCL--------------------------- 241

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            +  + A+ +    DS + +++I  Y  +G   EA +LFE  +   L   N + F  +L 
Sbjct: 242 -EDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGG-NDVTFLSLLY 299

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             SH  L+                     K  G   ++     +  Y +K   E   CV 
Sbjct: 300 ACSHNGLK--------------------EKGMGFFKLM-----VEKYGLKPRLEHYTCV- 333

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQ-MRLSG 588
              +D+  + G + +A+++   +P   DV  W T++S C  +   D+A     + +RL+ 
Sbjct: 334 ---VDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNP 390

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
              D  T+ +L    +     +   ++   +   +   +P  G+S               
Sbjct: 391 --QDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEP--GVSW-------------- 432

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEET----LKLFEDMKAHGVEPDSVT 696
                ++++N V   +M  G   H   EE      +L E+MK  G  PD+ T
Sbjct: 433 -----LEVKNRVFQFSM--GDKSHPMSEEIDLYLKELMEEMKLRGYVPDTAT 477



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 32/240 (13%)

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM----------R 585
           MY K G + +A + FN +P  + ++   +I+G V +G+ D A+ ++ +M           
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 586 LSGVV---------------------PDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +SG++                     PDEFT   +++  + L A   G+Q+HA ++K   
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             +  VG SL  MY K G++ +   + K M +RN V WN ++ G AQ+G+ E  L L+  
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNM 180

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           MK  G+ PD +T + V+S+ +    + +  +  H    K G    V   S L+    + G
Sbjct: 181 MKMSGLRPDKITLVSVISSSAELATLFQG-QQIHAEAIKAGANSAVAVLSSLISMYSKCG 239



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 34/281 (12%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L+  + + G L  A ++FD+M +R++ +WN+++     SG    E    G  LFR + 
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV-----SGLIQFEFNENGLFLFREMH 81

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E        TL  +L+ C      +A + VH Y LK G  ++  V  +L ++Y K G + 
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           E + +   M+ R+VV W  ++   A+NG  E V  L+  +  SGL PD  ++  V+   +
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201

Query: 272 DLG------KRHEEQVQAYA-----------------------IKLLLYNNNSNVVLWNK 302
           +L       + H E ++A A                       +K LL   + + VLW+ 
Sbjct: 202 ELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSS 261

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            ++ Y   G    A+  F  M +  +  + VTFL  L A +
Sbjct: 262 MIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACS 302



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR          GK  HA +L      +  + ++L  MY + GSL    ++   M  R
Sbjct: 94  SVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIR 153

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++++WN+++A  A +G  + E V +   L+  ++ S     ++TL  ++        ++ 
Sbjct: 154 NVVAWNTLIAGNAQNG--HFEGVLD---LYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAYA 236
            + +H  A+K G      V  +L+++YSK G + ++ K L D  +  D VLW  M+ AY 
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLD-CEHPDSVLWSSMIAAYG 267

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDD 260
            +G GEE  HLF  + + GL  +D
Sbjct: 268 FHGRGEEAVHLFEQMEQEGLGGND 291



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 15/183 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++  +   + L  G+  HA  + +       + ++L++MYS+CG L  + +        
Sbjct: 195 SVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHP 254

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           D + W+S++AAY   G G      E   LF  + +     + +T   LL  C  +G    
Sbjct: 255 DSVLWSSMIAAYGFHGRGE-----EAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEK 309

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
              +    V  Y LK  L  + +    +V++  + G + EA+ +   M  E DVV+WK +
Sbjct: 310 GMGFFKLMVEKYGLKPRL--EHYT--CVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTL 365

Query: 232 LRA 234
           L A
Sbjct: 366 LSA 368


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 205/603 (33%), Positives = 323/603 (53%), Gaps = 50/603 (8%)

Query: 362 GFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
           G+ S  +   SL+ +Y +M C  G R D FT   VL+A   L   + + +++H   +   
Sbjct: 135 GYASNGLPMKSLV-LYREMLCF-GQRADNFTYPFVLKACGDLLL-VEIGRRVHSEVVVCG 191

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
             +D +V  +L+ +Y + G M  A  +F+     DL +WN MI GY  + +S  A  +F 
Sbjct: 192 LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFD 251

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKC 540
            M  +G   D  T+   + AC  L  +K+GK +H YA+++     +   ++ +++MY  C
Sbjct: 252 LMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC 311

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             MVDA+ +F  +   D V+W +MI G   NG+   +L ++ +M L G  PD+ TF  ++
Sbjct: 312 NCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVL 371

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A   + AL  G  IH+ L+K    ++  VG +LVDMY+KCG++  +  +F +M  ++ V
Sbjct: 372 GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W+AM+ G   HG G E + + + MKA+ V PD+  F  +LSACS+ GLV E  E F+ M
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
            ++Y ++P + HYS +VD LGRAG   EA  +I +M  + ++ +  ALL A R+  + + 
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKL 551

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
            +  A+K+  + P   S+Y+ LSNI+AA  +WDDV   R  ++RK +KK P         
Sbjct: 552 AEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDN 611

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                          + I+AK+  L +++KE GY PDT  V  DVEEE KE+ L+ HSE+
Sbjct: 612 MVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSER 671

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCP 914
           LA A+ LI+T P +VI                     L+ +E +  +  RFHH   G C 
Sbjct: 672 LAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCS 731

Query: 915 CAD 917
           C D
Sbjct: 732 CGD 734



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 191/379 (50%), Gaps = 19/379 (5%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD-SFVSTALIDVYCRNGSM 442
           CG     FT       + S  +G    +Q+H H I    + + ++++T L   Y   G M
Sbjct: 62  CGALLQSFT------NTKSFKQG----QQLHAHMISFSILENNTYLNTKLAAFYAGCGLM 111

Query: 443 AEAEYLFEN---KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           ++AE +F+    K+ F    WN MI GY  +    K+L L+  M   G+R D  T    +
Sbjct: 112 SQAEVIFDGIVLKNSF---LWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVL 168

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           KACG LL+++ G+++H+  +  G E D+ V + +L MY K G M  A+ +F+ +   D  
Sbjct: 169 KACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLT 228

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +W TMISG   N +   A  ++  M  +G+  D  T   L+ A + L A+++G+ IH   
Sbjct: 229 SWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYA 288

Query: 620 IKLDCSS-DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++    + + F   SL++MY  C  + DA  LF+++  ++TV WN+M++G A++G+  E+
Sbjct: 289 VRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFES 348

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L+LF  M   G  PD VTFI VL AC     +     + H    K G +      + LVD
Sbjct: 349 LRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGM-SIHSYLVKKGFDANTIVGTALVD 407

Query: 739 ALGRAGRTKEAGELILSMP 757
              + G    +  +   MP
Sbjct: 408 MYSKCGSLACSRRVFDEMP 426



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 189/439 (43%), Gaps = 49/439 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR-FLTNNLMTMYSRCGSLVYARRL 110
           +S Q  ++L+   +T     G+  HA +++ S + +  +L   L   Y+ CG +  A  +
Sbjct: 58  TSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVI 117

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR---LTLAPLLK 167
           FD +  ++   WN ++  YA +G      V          RE + F  R    T   +LK
Sbjct: 118 FDGIVLKNSFLWNFMIRGYASNGLPMKSLVL--------YREMLCFGQRADNFTYPFVLK 169

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
            C     V     VH   +  GL  D +V  +L+ +Y+KFG +  A+ +FD M ERD+  
Sbjct: 170 ACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTS 229

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV-QAYAI 286
           W  M+  YA+N      F +F  + ++GL  D  ++  +L   +DL    E +V   YA+
Sbjct: 230 WNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAV 289

Query: 287 KLLLYNNN-----------------------------SNVVLWNKKLSGYLQVGDNHGAI 317
           +  + N N                              + V WN  + GY + GD   ++
Sbjct: 290 RNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESL 349

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  M       D VTF+  L A      L  G  IH   +K GF +  IVG +L++MY
Sbjct: 350 RLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMY 409

Query: 378 SKMGCV-CGLRT-DQFTLASVLRASSSLPE-GLHLSKQIHVHAIK----NDTVADSFVST 430
           SK G + C  R  D+    S++  S+ +   GLH   +  +  +     N  + D+ V T
Sbjct: 410 SKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFT 469

Query: 431 ALIDVYCRNGSMAEAEYLF 449
           +++      G + E + +F
Sbjct: 470 SILSACSHAGLVVEGKEIF 488



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           RN  +F  SL  F + +   S      + ++L      + L  G S H+ ++      + 
Sbjct: 341 RNGDAFE-SLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANT 399

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN-AENVTEGFRLF 147
            +   L+ MYS+CGSL  +RR+FD+MPD+ L+SW++++A Y   G G  A ++ +G +  
Sbjct: 400 IVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKAN 459

Query: 148 RSLRESITFTSRLT 161
             + ++  FTS L+
Sbjct: 460 SVIPDNGVFTSILS 473


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 230/762 (30%), Positives = 368/762 (48%), Gaps = 84/762 (11%)

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           R L E+I    RL+L  LL+ C +   +   + VH + +   +  D +    ++ +Y+  
Sbjct: 28  RFLEETIP--RRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC 83

Query: 208 GKIREAKFLFDGMQER--DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           G   +   +F  +  R   +  W  ++ ++  NG   +    +  +   G+ PD  +  C
Sbjct: 84  GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143

Query: 266 VLG----------------VISDLGKRHEEQVQAYAIKLLLYNNNSNV------------ 297
           ++                  +S LG    E V +  IK  L     +V            
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203

Query: 298 -VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            V+WN  L+GY + G     I+ F  M    +  ++VTF   L+  A    ++LG Q+HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG---------------------CVC----------- 384
             + SG      + NSL++MYSK G                     C+            
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323

Query: 385 -----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      G+  D  T +S+L + S   E L   KQIH + +++    D F+++ALI
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKF-ENLEYCKQIHCYIMRHSISLDIFLTSALI 382

Query: 434 DVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           D Y  CR  SMA+   +F   +  D+  + AMI GY+ +     +LE+F  +       +
Sbjct: 383 DAYFKCRGVSMAQN--IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           EIT+ + +   G LL LK G+++H + +K GF+    +   ++DMY KCG M  A  IF 
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +   D V+W +MI+ C  +     A+ I+ QM +SG+  D  + +  + A + L +   
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+ IH  +IK   +SD +   +L+DMYAKCGN++ A  +FK M  +N V WN+++     
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620

Query: 672 HGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           HG  +++L LF +M +  G+ PD +TF+ ++S+C + G V E    F  M E YGI+P+ 
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ 680

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +VD  GRAGR  EA E + SMPF   A +   LLGACR+  + E  +  + KLM 
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L+P +S  YVL+SN  A A +W+ VT  R  MK + V+K P 
Sbjct: 741 LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPG 782



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 221/512 (43%), Gaps = 45/512 (8%)

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVV-LWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           IS + KR    +  Y   L L N++  +     ++LS  LQ   N        N++R   
Sbjct: 3   ISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNP-------NLLRQGK 55

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQ-QIHGTTLKSG--FYS---------------AVIVG 370
           Q  +   + +++  + TD   LG   + G+    G  FY                +  V 
Sbjct: 56  QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115

Query: 371 NSLIN----MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-- 424
           N L+N     Y KM C  G+  D  T   +++A  +L       K        +DTV+  
Sbjct: 116 NGLLNQALAFYFKMLCF-GVSPDVSTFPCLVKACVAL-------KNFKGIDFLSDTVSSL 167

Query: 425 ----DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               + FV+++LI  Y   G +     LF+     D   WN M+ GY         ++ F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
           S M       + +T    +  C   L++  G Q+H   + SG + +  + + +L MY KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G   DA  +F  +   D V W  MISG V +G  + +L+ +++M  SGV+PD  TF+ L+
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            + S    LE  +QIH  +++   S D F+  +L+D Y KC  +  A  +F Q +  + V
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           ++ AM+ G   +G   ++L++F  +    + P+ +T + +L       L  +     H  
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL-LALKLGRELHGF 466

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
             K G +        ++D   + GR   A E+
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 228/776 (29%), Positives = 374/776 (48%), Gaps = 75/776 (9%)

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           S NS + A    G+      ++   L      S   T++ T   LLK C S   ++   T
Sbjct: 22  SINSKIKALVQQGK-----YSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRT 76

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-----DVVLWKVMLRAY 235
           +H   + +GL  D +++ +L+N+Y K G +  A  +FD M E      D+ +W  ++  Y
Sbjct: 77  IHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGY 136

Query: 236 AENGFGEEVFHLFVDLH----------------RSGLCPDDESVQCVLGVISDLGKRHEE 279
            + G  EE    F  +                 R+    D      ++G+ S   +  E 
Sbjct: 137 FKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPME- 195

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
              A+++   L  N SN+V WN  + G+++ G    ++E +      N +  S +F  A 
Sbjct: 196 ---AWSLFGKL-ENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAF 251

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------CG 385
            A +  + L+ G+Q+H   +K  F     V  SL+ MY+K G V                
Sbjct: 252 TACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 311

Query: 386 LR-----------------------------TDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           LR                              D FT++S+L +  S+       + +H  
Sbjct: 312 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLL-SGCSVVGSYDFGRTVHAE 370

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            IK    ++  + +AL+ +Y + GS  +A+ +F      D+  W +MI G+  +     A
Sbjct: 371 VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDA 430

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           L+LF  M   G + D   + + + A   L  ++ G  +H +A+K G E D+ V+  ++DM
Sbjct: 431 LDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDM 490

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y K G    A+ +F+ +P  + VAW +MIS    NG  ++++++  Q+   G   D  + 
Sbjct: 491 YSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSI 550

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             ++ A S + AL +G+ +HA  I+L   SD  V  +L+DMY KCG ++ A ++F+ M  
Sbjct: 551 TTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPR 610

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           RN V WN+M+ G   HGN EE ++LF++MK     PD VTF+ ++++CS++G+V E    
Sbjct: 611 RNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNL 670

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F LMR +YG+EP +EHY+ +VD LGRAGR  +A   I  MP +A  S+   LL ACR   
Sbjct: 671 FQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHR 730

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           + E G+ VA+ L+ +EP   S YV L N++     WD   + R  MK + +KK P 
Sbjct: 731 NMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPG 786



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 178/413 (43%), Gaps = 33/413 (7%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N+ I   +      +ALEL S    S     + T  + +K C  L  L  G+ +HA  + 
Sbjct: 24  NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI-----PAPDDVAWTTMISGCVDNGEED 575
            G + D  +++ +++MYVKCG +  A  +F+ +      APD   W  +I G    G  +
Sbjct: 84  MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
             L+ + +M+                    L+    GRQIH  +I+     DP++  +L+
Sbjct: 144 EGLAQFCRMQE-------------------LSWYMAGRQIHGYIIRNMFEGDPYLETALI 184

Query: 636 DMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
            MY+ C    +A+ LF +++ R N V WN M+ G  ++G  E++L+L+   K    +  S
Sbjct: 185 GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVS 244

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
            +F G  +ACS+ G V +     H    K   + +    + L+    ++G  ++A + + 
Sbjct: 245 ASFTGAFTACSH-GEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK-VF 302

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE-PFDSSAYVLLSNIFAAANQWD 813
               +    +  A++ A    G       +  K+ A E P DS     L +  +    +D
Sbjct: 303 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 362

Query: 814 DVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
              +   E+ +++++ +      A    L+    + G   D D V   ++E +
Sbjct: 363 FGRTVHAEVIKRSMQSN-----VAIQSALLTMYYKCGSTEDADSVFYTMKERD 410


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 214/615 (34%), Positives = 324/615 (52%), Gaps = 73/615 (11%)

Query: 371 NSLINMYSKMGCVC------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           N+LIN Y+  G               GL  D FT + V+ A  +     H+     +H++
Sbjct: 109 NTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCN-----HVGLIRQLHSL 163

Query: 419 KNDTVADSFVST--ALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSH 474
              +  DS+VS   +L+  Y +NG + EAE +F    ++  D  +WN+MI  Y       
Sbjct: 164 AFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGL 223

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           KAL L+  M   G  +D  T+A+ +    C+  L  G Q HA A+K+GF  +  V SG++
Sbjct: 224 KALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLI 283

Query: 535 DMYVKCGA-MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL-ALSIYHQMRLSGVVPD 592
           DMY KCGA M +++ +F +I   D V W TMISG   N E  + AL  + QM+ +G  PD
Sbjct: 284 DMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPD 343

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF-VGISLVDMYAKCGNIEDAYILF 651
           + +F   + A S L++  QG+Q HA  +K +  S+   V  +LV MY+KCGN++DA  LF
Sbjct: 344 DCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLF 403

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           ++M   NTV  N+++ G AQHG G E+L LFE M A  + P S+T + +LSAC++TG V 
Sbjct: 404 QRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVE 463

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  + F++M++ +GIEPE EHYS ++D LGRAG+  EA  LI +MPF   ++   ALLGA
Sbjct: 464 EGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGA 523

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR  G+ E  +  A + + LEP ++  Y++L+++++AA +W++    R  M+ + ++K P
Sbjct: 524 CRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKP 583

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL---DVEEE 865
                                     I   ++ +  ++K  GYVPD  +  +   +  E+
Sbjct: 584 GCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQ 643

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------A 902
           EKE  L +HSEKLA A+GL+ T     +L  K                           A
Sbjct: 644 EKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDA 703

Query: 903 NRFHHLRDGMCPCAD 917
            RFH   DG C C D
Sbjct: 704 YRFHCFEDGRCSCGD 718



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 148/608 (24%), Positives = 248/608 (40%), Gaps = 146/608 (24%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG---------------- 102
           IL+  I+  DLL GKS H   L S      +L+N+ + +YS+C                 
Sbjct: 14  ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73

Query: 103 --------------SLVY-ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
                         SL++ A  LFD++P  DL+S+N+++ AYA  G+           LF
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD-----TLSALSLF 128

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS--GALVNIYS 205
             +RE        T + ++  C +  +V     +H  A   G  +D +VS   +L+  YS
Sbjct: 129 GEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSG--FDSYVSVKNSLLTYYS 184

Query: 206 KFGKIREAKFLFDGMQE--RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           K G + EA+ +F+GM E  RD V W  M+ AY ++  G +   L+ D+   G   D  ++
Sbjct: 185 KNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTL 244

Query: 264 QCVLGVIS---DLGKRHEEQVQAYAIKLLLYNNN-------------------------- 294
             VL   S   DL      Q  A AIK     N                           
Sbjct: 245 ASVLTTFSCVEDLSG--GLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEE 302

Query: 295 ---SNVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
              S++V+WN  +SGY Q  + +  A+ECF  M R+    D  +F+ A++A +   + + 
Sbjct: 303 ICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQ 362

Query: 351 GQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
           G+Q H   +KS   S  I V N+L+ MYSK G                    +L +   L
Sbjct: 363 GKQFHALAMKSEIPSNQISVNNALVTMYSKCG--------------------NLQDARKL 402

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            +++  H        ++    ++I  Y ++G   E+  LFE      +A           
Sbjct: 403 FQRMPQH--------NTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAP---------- 444

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDL 527
                                  IT+ + + AC     +++GK+ +   MK   G E + 
Sbjct: 445 ---------------------TSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEPEA 482

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDL---ALSIYHQ 583
              S ++D+  + G + +A+ + + +P +P   AW  ++  C   G  +L   A + + Q
Sbjct: 483 EHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQ 542

Query: 584 MRLSGVVP 591
           +  +  VP
Sbjct: 543 LEPTNAVP 550



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 9/232 (3%)

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           +A     E ++   + ++  Y K   +  A  +F+ IP PD V++ T+I+   D G+   
Sbjct: 64  HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SL 634
           ALS++ +MR  G+V D FTF+ ++ A  C   +   RQ+H+  +      D +V +  SL
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITA--CCNHVGLIRQLHS--LAFSSGFDSYVSVKNSL 179

Query: 635 VDMYAKCGNIEDAYILFKQM--DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +  Y+K G +E+A ++F  M  ++R+ V WN+M+V   QH  G + L L+ DM   G E 
Sbjct: 180 LTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI 239

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           D  T   VL+  S    +S   + FH    K G        S L+D   + G
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCG 290



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 110/223 (49%), Gaps = 6/223 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS-LVYARRLFDKMPD 116
           S+L       DL  G   HA+ + +    +R + + L+ MY++CG+ +  +R++F+++  
Sbjct: 246 SVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG 305

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            DL+ WN++++ Y+     N E   E    FR ++ +  +    +    +  C +     
Sbjct: 306 SDLVVWNTMISGYSQ----NKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPS 361

Query: 177 ASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
             +  H  A+K  +  ++  V+ ALV +YSK G +++A+ LF  M + + V    ++  Y
Sbjct: 362 QGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGY 421

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           A++G G E  +LF  +  + + P   ++  +L   +  G+  E
Sbjct: 422 AQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEE 464


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 226/683 (33%), Positives = 344/683 (50%), Gaps = 78/683 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   AI+ +V MI   +  +S TF   L + A
Sbjct: 55  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCA 114

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
                  GQQIHG  LK G+   + V  SLI+MY K G                      
Sbjct: 115 KLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNG---------------------- 152

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                  +    H + + +     VS TALI  Y   G +  A+ +F+     D+ +WNA
Sbjct: 153 -------RWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNA 205

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I GY  + N+ +AL+LF  M  +  + DE T+ T V AC     ++ G+Q+H++    G
Sbjct: 206 IISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHG 265

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
              +L + + ++D+Y KCG +  A  +F  +   D ++W TMI G         AL ++ 
Sbjct: 266 LGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQ 325

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAK 640
           +M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAK
Sbjct: 326 EMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAK 385

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+IE A+ +F  M  R     NAM+ G A HG       +F  M+ +G+EPD +TF+G+
Sbjct: 386 CGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGL 445

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS++G++      F  M + Y I P++EHY  ++D LG  G  KEA E+I +M  E 
Sbjct: 446 LSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEP 505

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              +  +LL AC++ G+ E G+  A+KL+ +EP +  +YVLLSNI+A A +W++V + R 
Sbjct: 506 DGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRA 565

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
            +  K +KK P                          I+  +E +   ++E G+VPDT  
Sbjct: 566 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSE 625

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------K 897
           VL ++EEE K+ AL +HSEKLA A+GLIST P +   I+ N                  K
Sbjct: 626 VLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 685

Query: 898 EPLYA---NRFHHLRDGMCPCAD 917
             + A    RFHH RDG+C C D
Sbjct: 686 REIIARDRTRFHHFRDGVCSCND 708



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/535 (23%), Positives = 235/535 (43%), Gaps = 36/535 (6%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN---IYSKFGKIREAKFLFDGM 220
           P L L  +   + +   +H   +K GL    +    L+    +   F  +  A  +F+ +
Sbjct: 4   PSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETI 63

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-E 279
           QE ++++W  M R +A +        L+V +   GL P+  +   +L   + L    E +
Sbjct: 64  QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
           Q+  + +KL       ++ +    +S Y++ G    A + F      +   D V++   +
Sbjct: 124 QIHGHVLKL---GYELDLYVHTSLISMYVKNGRWKDAHKVF----DGSSHRDVVSYTALI 176

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------CVCGLR 387
              A    +   Q++            V+  N++I+ Y+  G                ++
Sbjct: 177 TGYASRGYIESAQKMFDEIP----VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D+ T+ +V+ A +     + L +Q+H     +   ++  +  ALID+Y + G +  A  
Sbjct: 233 PDESTMVTVVSACAQ-SGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACG 291

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LF+     D+ +WN MI GY   N   +AL LF  M  SGE  +++T+ + + AC  L  
Sbjct: 292 LFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351

Query: 508 LKQGKQMHAYAMK--SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +  G+ +H Y  K   G      + + ++DMY KCG +  A  +FN +      A   MI
Sbjct: 352 IDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMI 411

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI---KL 622
            G   +G  + A  I+ +MR +G+ PD+ TF  L+ A S    L+ GR+I  ++    K+
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKI 471

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
               + +    ++D+    G  ++A  +   M M  + V+W ++L     HGN E
Sbjct: 472 TPKLEHYG--CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVE 524



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G +  A+++FD++P +D++SWN+I++ YA +G    
Sbjct: 159 KVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTG---- 214

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            N  E   LF+ + ++       T+  ++  C  SG +     VH +    GL  +  + 
Sbjct: 215 -NNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIV 273

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++YSK G++  A  LF G+  +DV+ W  M+  Y      +E   LF ++ RSG  
Sbjct: 274 NALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGEN 333

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYN------------ 292
           P+D ++  +L   + LG             KR +    A +++  L +            
Sbjct: 334 PNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAH 393

Query: 293 ------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                 ++  +   N  + G+   G  + A + F  M ++ ++ D +TF+  L+A + + 
Sbjct: 394 QVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453

Query: 347 NLNLGQQI 354
            L+LG++I
Sbjct: 454 MLDLGRRI 461



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 47/282 (16%)

Query: 508 LKQGKQMHAYAMKSGFE---------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           L+  + +HA  +K+G           L+ C+ S   D       +  A S+F  I  P+ 
Sbjct: 15  LQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFD------GLPYAISVFETIQEPNL 68

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           + W TM  G   + +   A+ +Y  M   G++P+ +TF  L+K+ + L   ++G+QIH +
Sbjct: 69  LIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGH 128

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGN-------------------------------IEDA 647
           ++KL    D +V  SL+ MY K G                                IE A
Sbjct: 129 VLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESA 188

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F ++ +++ V WNA++ G A  GN +E L LF++M    V+PD  T + V+SAC+ +
Sbjct: 189 QKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQS 248

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           G +    +  H   + +G+   ++  + L+D   + G  + A
Sbjct: 249 GSIQLGRQ-VHSWIDDHGLGSNLKIVNALIDLYSKCGEVETA 289



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 13/241 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   +++     +  + LG+  H+ I +     +  + N L+ +YS+CG +  A  LF  
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           + ++D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 296 LSNKDVISWNTMIGGYTH-----LNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLG 350

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+     +  +L+++Y+K G I  A  +F+ M  R +     M
Sbjct: 351 AIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAM 410

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-HEEQVQAYA 285
           +  +A +G     F +F  + ++G+ PDD +   +L   S     DLG+R      Q Y 
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYK 470

Query: 286 I 286
           I
Sbjct: 471 I 471


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 231/743 (31%), Positives = 345/743 (46%), Gaps = 150/743 (20%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM------ 376
           M+R+  + D  T    L A     +   G   HG    +GF S V + N+L+ M      
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 377 -----------------------------------------YSKMGCVC-----GLRTDQ 390
                                                    +SKM  +        R+D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            ++ ++L A  SL + +  +K++H +AI+N T  D FV  ALID Y + G M  A  +F 
Sbjct: 121 ISIVNILPACGSL-KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179

Query: 451 NKDGFDLATWNAMIFGYILSNN-----------------------------------SHK 475
             +  D+ +WNAM+ GY  S N                                   SH+
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS----------GFEL 525
           AL +F  M  SG   + +TI + + AC  L    QG ++HAY++K+          G + 
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQ 583
           DL V + ++DMY KC +   A+SIF+DIP  +   V WT MI G    G+ + AL ++ +
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 584 M--RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC--SSDPFVGISLVDMYA 639
           M     GV P+ +T + ++ A + L A+  G+QIHA +++     SS  FV   L++MY+
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCG+++ A  +F  M  ++ + W +M+ G   HG G E L +F+ M+  G  PD +TF+ 
Sbjct: 420 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 479

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           VL ACS+ G+V +    F  M   YG+ P  EHY++ +D L R GR  +A + +  MP E
Sbjct: 480 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
            +A +  ALL ACRV  + E  +    KL+ +   +  +Y L+SNI+A A +W DV   R
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 599

Query: 820 GEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTD 856
             MK+  +KK P                       +  I+A +E LI RIK  GYVP+T+
Sbjct: 600 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETN 659

Query: 857 FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-------------- 902
           F L DV+EEEK   L  HSEKLA AYGL++T P   I   K                   
Sbjct: 660 FALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIV 719

Query: 903 ---------NRFHHLRDGMCPCA 916
                    +RFHH ++G C C 
Sbjct: 720 DHEIVVRDPSRFHHFKNGSCSCG 742



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 242/571 (42%), Gaps = 103/571 (18%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G + H  I  +    + F+ N L+ MYSRCGSL  A  +FD++  R   D+ISWNSI++A
Sbjct: 29  GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 88

Query: 129 YAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           +  S     A ++     L    + +   +  +++  +L  C S   V  ++ VHG A++
Sbjct: 89  HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 148

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   D FV  AL++ Y+K G +  A  +F+ M+ +DVV W  M+  Y+++G  +  F L
Sbjct: 149 NGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 208

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F ++ +  +  D                                     +V W   ++GY
Sbjct: 209 FKNMRKENIPLD-------------------------------------MVTWTAVIAGY 231

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS------ 361
            Q G +H A+  F  MI S    + VT +  L+A A     + G +IH  +LK+      
Sbjct: 232 SQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLD 291

Query: 362 ----GFYSAVIVGNSLINMYSKMGCVCGLRT----------------------------- 388
               G    ++V N+LI+MYSK       R+                             
Sbjct: 292 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 351

Query: 389 ------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS--FV 428
                             + +T++ +L A + L   + + KQIH + +++     S  FV
Sbjct: 352 DALKLFVEMISEPYGVAPNAYTISCILMACAHLA-AIRIGKQIHAYVLRHHQYDSSAYFV 410

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +  LI++Y + G +  A ++F++       +W +M+ GY +     +AL++F  M  +G 
Sbjct: 411 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 470

Query: 489 RLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
             D+IT    + AC    M+ QG     + +   G        +  +D+  + G +  A 
Sbjct: 471 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAW 530

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
               D+P  P  V W  ++S C  +   +LA
Sbjct: 531 KTVKDMPMEPTAVVWVALLSACRVHSNVELA 561


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 226/717 (31%), Positives = 353/717 (49%), Gaps = 76/717 (10%)

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G  + E V  +L++ +SK  +  +A  +F      +V  W  ++     N     VF L
Sbjct: 1   MGYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDL 60

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------LLLYN-- 292
           F ++      PD  +   VL   + L + R  + VQA  IK            + LY   
Sbjct: 61  FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDVFVCTSIVDLYAKC 120

Query: 293 -------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                        +N +VV W   LSGY +  D   A+E F  M  S V+ +S T    +
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------- 384
           +A      +    Q+H    KSGFY    V  +LI+M SK G +                
Sbjct: 181 SACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQ 240

Query: 385 -----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        GL  D+F++ S+L    S+ + L+L KQ+H 
Sbjct: 241 NIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL----SVLDCLNLGKQVHS 296

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           + +K+  + D  V ++L  +Y + GS+ E+  LF+     D A W +MI G+       +
Sbjct: 297 YTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLRE 356

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ LFS M   G   DE T+A  +  C  L  L + K++H Y +++G +  + + S +++
Sbjct: 357 AIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVN 416

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            Y KCG++  A+ +++ +P  D V+ +++ISG   +G       ++  M +SG   D + 
Sbjct: 417 TYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYA 476

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            + ++KA+      E G Q+HA + K+   ++P VG SL+ MY+K G+IED    F Q++
Sbjct: 477 ISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQIN 536

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             + + W A++   AQHG   E L+++  MK  G +PD VTF+GVLSACS+ GLV E Y 
Sbjct: 537 GPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYF 596

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
           + + M + YGIEPE  HY  +VDALGR+GR +EA   I + P +  A +   LL AC++ 
Sbjct: 597 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIY 656

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           GD E GK  A+K + LEP D+ AYV LSNI A   +WD+V   R  MK   V+K+P 
Sbjct: 657 GDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 713



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 137/603 (22%), Positives = 263/603 (43%), Gaps = 91/603 (15%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + S+L    S  +L  GK   AR++      D F+  +++ +Y++CG +  AR +F 
Sbjct: 73  SYTYSSVLAACASLEELRFGKVVQARVIKCGA-EDVFVCTSIVDLYAKCGHMAEAREVFS 131

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           ++ +  ++SW  +L+ Y  S +  +        +FR +R S    +  T+  ++  C   
Sbjct: 132 RISNPSVVSWTVMLSGYTKSNDAFS-----ALEIFREMRHSGVEINSCTVTSVISACGRP 186

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF---DGMQERDVVLWK 229
             V  +  VH +  K G   D  V+ AL+++ SK G I  ++ +F   D ++ +++V   
Sbjct: 187 SMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--N 244

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--DLGKRHEEQVQAYAIK 287
           VM+ ++++N    +   LF  + + GL PD+ SV  +L V+   +LGK    QV +Y +K
Sbjct: 245 VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGK----QVHSYTLK 300

Query: 288 -------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIEC 319
                          +Y+   ++                 W   +SG+ + G    AI  
Sbjct: 301 SGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGL 360

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  M+      D  T    L   +   +L   ++IHG TL++G    + +G++L+N YSK
Sbjct: 361 FSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSK 420

Query: 380 MG-------------------------------------------CVCGLRTDQFTLASV 396
            G                                            + G   D + ++S+
Sbjct: 421 CGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSI 480

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L+A + L E   L  Q+H +  K     +  V ++L+ +Y + GS+ +    F   +G D
Sbjct: 481 LKA-AVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPD 539

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-QMH 515
           L  W A+I  Y     +++AL+++  M   G + D++T    + AC    ++++G   ++
Sbjct: 540 LIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLN 599

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
           +     G E +      ++D   + G + +A++  N  P  PD + W T+++ C   G+ 
Sbjct: 600 SMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDV 659

Query: 575 DLA 577
           +L 
Sbjct: 660 ELG 662



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 5/230 (2%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           +S   S   ++L    S   L   K  H   L +       L + L+  YS+CGSL  AR
Sbjct: 369 TSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLAR 428

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           +++D++P+ D +S +S+++ Y+  G      V +GF LFR +  S        ++ +LK 
Sbjct: 429 KVYDRLPEMDPVSCSSLISGYSQHGL-----VQDGFLLFRDMVMSGFSMDSYAISSILKA 483

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
            + S        VH Y  KIGL  +  V  +L+ +YSKFG I +    F  +   D++ W
Sbjct: 484 AVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAW 543

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
             ++ +YA++G   E   ++  +   G  PD  +   VL   S  G   E
Sbjct: 544 TALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEE 593


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 202/558 (36%), Positives = 304/558 (54%), Gaps = 48/558 (8%)

Query: 408 HLSKQIHVHAIKNDTVADS--FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
           H  KQIH  +I++    ++       +  +   +  M+ A  +F      ++ TWN +I 
Sbjct: 32  HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIR 91

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           GY  S+N   A   +  M  S    D  T    +KA    L +++G+ +H+  +++GFE 
Sbjct: 92  GYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFES 151

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
            + V + +L +Y  CG    A  +F  +   D VAW +MI+G   NG  + AL+++ +M 
Sbjct: 152 LVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMS 211

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
           + GV PD FT   L+ AS+ L ALE GR++H  L+K+  S +  V  SL+D+YAKCG I 
Sbjct: 212 VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIR 271

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +A  +F +M  RN V W +++VGLA +G GEE L+LF++M+  G+ P  +TF+GVL ACS
Sbjct: 272 EAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACS 331

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           + G++ E +E F  M+E+ GI P +EHY  +VD L RAG  K+A E I +MP + +A + 
Sbjct: 332 HCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 391

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
           R LLGAC + G    G+     L+ LEP  S  YVLLSN++A+  +W DV   R  M + 
Sbjct: 392 RTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKD 451

Query: 826 NVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
            VKK P                       +  ++A +E + + +K  GYVP T  VL D+
Sbjct: 452 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADI 511

Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY 901
           EEEEKE+AL YHSEK+A A+ L++TPP + I                     + ++E + 
Sbjct: 512 EEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVI 571

Query: 902 AN--RFHHLRDGMCPCAD 917
            +  RFHH R G C C D
Sbjct: 572 RDRSRFHHFRGGSCSCKD 589



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 46/335 (13%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           +YA  +    +N NV  WN  + GY +  +   A   +  M+ S V+ D+ T+   L A+
Sbjct: 69  SYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAI 128

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           + + N+  G+ IH  T+++GF S V V NSL+++Y+  G                     
Sbjct: 129 SKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWN 188

Query: 382 ----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                  V G+  D FT+ S+L AS+ L   L L +++HV+ +K
Sbjct: 189 SMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAEL-GALELGRRVHVYLLK 247

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                +S V+ +L+D+Y + G++ EA+ +F      +  +W ++I G  ++    +ALEL
Sbjct: 248 VGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALEL 307

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYV 538
           F  M   G    EIT    + AC    ML +G +       + G    +     ++D+  
Sbjct: 308 FKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLS 367

Query: 539 KCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNG 572
           + G +  A     ++P  P+ V W T++  C  +G
Sbjct: 368 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 402



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 6/235 (2%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTS-DLLLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
           F ++   S     +  +  L  AIS S ++  G++ H+  + +      F+ N+L+ +Y+
Sbjct: 105 FYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYA 164

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
            CG    A ++F+ M +RDL++WNS++  +A +G  N     E   LFR +         
Sbjct: 165 ACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPN-----EALTLFREMSVEGVEPDG 219

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T+  LL      G +     VH Y LK+GL  +  V+ +L+++Y+K G IREA+ +F  
Sbjct: 220 FTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSE 279

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           M ER+ V W  ++   A NGFGEE   LF ++   GL P + +   VL   S  G
Sbjct: 280 MSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCG 334



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 151/344 (43%), Gaps = 34/344 (9%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           + ++F   T  N  +  +SLL F   S        +  FSI RH +S ++  +GK     
Sbjct: 4   VTTNFVSTTPENPLTKCISLLQFCASSKHKLKQIHA--FSI-RHGVSLNNPDMGKHL--- 57

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
                          + T+ S    + YA  +F  + + ++ +WN+I+  YA S     +
Sbjct: 58  ---------------IFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAES-----D 97

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           N +  F  +R +  S       T   LLK    S  V   E +H   ++ G     FV  
Sbjct: 98  NPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQN 157

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           +L++IY+  G    A  +F+ M+ERD+V W  M+  +A NG   E   LF ++   G+ P
Sbjct: 158 SLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEP 217

Query: 259 DDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
           D  +V  +L   ++LG      +V  Y +K+ L + NS+V   N  L  Y + G    A 
Sbjct: 218 DGFTVVSLLSASAELGALELGRRVHVYLLKVGL-SKNSHVT--NSLLDLYAKCGAIREAQ 274

Query: 318 ECFVNMIRSN-VQYDSVTFLVALAAVA-GTDNLNLGQQIHGTTL 359
             F  M   N V + S+  +V LA    G + L L +++ G  L
Sbjct: 275 RVFSEMSERNAVSWTSL--IVGLAVNGFGEEALELFKEMEGQGL 316


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 208/611 (34%), Positives = 317/611 (51%), Gaps = 96/611 (15%)

Query: 367 VIVGNSLINMY-------SKMGC------VCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           V   NS+I+ Y         +GC      V  +R D +T   VL+A  +L +G    ++I
Sbjct: 82  VYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDG----RKI 137

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H  A K     + FV+ +LI +Y R G    A  LF++    D+ +WNAMI G I + N+
Sbjct: 138 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 197

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            +AL++   M   G +++ +T+ + +                                  
Sbjct: 198 AQALDVLDEMRLEGIKMNFVTVVSILPV-------------------------------F 226

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPD 592
           +DMY K G +  A  +F  IP  D ++W T+I+G   NG    A+ +Y  M     ++P+
Sbjct: 227 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 286

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           + T+  ++ A + + AL+QG +IH  +IK +   D FV   L+D+Y KCG + DA  LF 
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFY 346

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           Q+   ++V WNA++     HG+ E+TLKLF +M   GV+PD VTF+ +LSACS++G V E
Sbjct: 347 QVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 406

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
               F LM+E YGI+P ++HY  +VD LGRAG  + A + I  MP +  AS+  ALLGAC
Sbjct: 407 GKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGAC 465

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           R+ G+ E GK+ +++L  ++  +   YVLLSNI+A   +W+ V   R   + + +KK P 
Sbjct: 466 RIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPG 525

Query: 833 -----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                    I+ ++  L  ++K  GY+PD  FVL DVEE+EKE 
Sbjct: 526 WSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEH 585

Query: 870 ALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFH 906
            L  HSE+LA A+G+ISTPP S I                     ++ +E +   +NRFH
Sbjct: 586 ILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFH 645

Query: 907 HLRDGMCPCAD 917
           H +DG+C C D
Sbjct: 646 HFKDGICSCGD 656



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 192/407 (47%), Gaps = 37/407 (9%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQ 352
             +V  WN  +S Y+  G  H AI CF  ++  S ++ D  TF   L A  GT  L  G+
Sbjct: 79  QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA-CGT--LVDGR 135

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF------------TLASVLRAS 400
           +IH    K GF   V V  SLI+MYS+ G   G+    F             + S L  +
Sbjct: 136 KIHCWAFKLGFQWNVFVAASLIHMYSRFG-FTGIARSLFDDMPFRDMGSWNAMISGLIQN 194

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
            +  + L +  ++ +  IK + V    +    +D+Y + G +  A  +FE     D+ +W
Sbjct: 195 GNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISW 254

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAM 519
           N +I GY  +  + +A+E++  M    E + ++ T  + + A   +  L+QG ++H   +
Sbjct: 255 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVI 314

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           K+   LD+ V++ ++D+Y KCG +VDA S+F  +P    V W  +IS    +G  +  L 
Sbjct: 315 KTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLK 374

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ---------IHANLIKLDCSSDPFV 630
           ++ +M   GV PD  TF  L+ A S    +E+G+          I  +L    C      
Sbjct: 375 LFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC------ 428

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
              +VD+  + G +E AY   K M ++ +  +W A+L     HGN E
Sbjct: 429 ---MVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 194/397 (48%), Gaps = 42/397 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G + ++     +  +S+  P     +K +H   +    V   F+ST L+++Y   G ++ 
Sbjct: 14  GNQNEEIDFNFLFDSSTKTP----FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 69

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACG 503
           +   F+     D+  WN+MI  Y+ + + H+A+  F  +    E R D  T    +KACG
Sbjct: 70  SRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG 129

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L+    G+++H +A K GF+ ++ V++ ++ MY + G    A+S+F+D+P  D  +W  
Sbjct: 130 TLV---DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNA 186

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MISG + NG    AL +  +MRL G+   +  F  +V   S L                 
Sbjct: 187 MISGLIQNGNAAQALDVLDEMRLEGI---KMNFVTVV---SILPV--------------- 225

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
                      VDMYAK G ++ A+ +F+ + +++ + WN ++ G AQ+G   E +++++
Sbjct: 226 ----------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 275

Query: 684 DM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
            M +   + P+  T++ +L A ++ G + +  +  H    K  +  +V   + L+D  G+
Sbjct: 276 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMK-IHGRVIKTNLHLDVFVATCLIDVYGK 334

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
            GR  +A  L   +P E+S + + A++    + G  E
Sbjct: 335 CGRLVDAMSLFYQVPQESSVTWN-AIISCHGIHGHAE 370



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 15/358 (4%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S++     K  HA ++ + ++   F++  L+ +Y+  G +  +R  FD++P +D+ +WNS
Sbjct: 28  SSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNS 87

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +++AY H+G  + E +   ++L   L  S       T  P+LK C   G +     +H +
Sbjct: 88  MISAYVHNGHFH-EAIGCFYQL---LLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCW 140

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A K+G  W+ FV+ +L+++YS+FG    A+ LFD M  RD+  W  M+    +NG   + 
Sbjct: 141 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 200

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL 304
             +  ++   G+  +  +V  +L V  D+  +      A+ +  ++     +V+ WN  +
Sbjct: 201 LDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEII--PVKDVISWNTLI 258

Query: 305 SGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           +GY Q G    AIE +  M     +  +  T++  L A A    L  G +IHG  +K+  
Sbjct: 259 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 318

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS-KQIHVHAIKN 420
           +  V V   LI++Y K    CG   D  +L   +   SS+     +S   IH HA K 
Sbjct: 319 HLDVFVATCLIDVYGK----CGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT 372



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 11/223 (4%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
            + MY++ G L  A ++F+ +P +D+ISWN+++  YA +G   A    E +++    +E 
Sbjct: 226 FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGL--ASEAIEVYKMMEECKEI 283

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
           I   ++ T   +L      G +     +HG  +K  L  D FV+  L+++Y K G++ +A
Sbjct: 284 IP--NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA 341

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             LF  + +   V W  ++  +  +G  E+   LF ++   G+ PD  +   +L   S  
Sbjct: 342 MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 401

Query: 274 GKRHEEQ-----VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
           G   E +     +Q Y IK  L +    V L  +  +GYL++ 
Sbjct: 402 GFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGR--AGYLEMA 442



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 14/184 (7%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W SIL        L  G   H R++ ++   D F+   L+ +Y +CG LV A  LF ++P
Sbjct: 290 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 349

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               ++WN+I++   H   G+AE      +LF  + +       +T   LL  C  SG+V
Sbjct: 350 QESSVTWNAIIS--CHGIHGHAEKT---LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 404

Query: 176 ----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKV 230
               W    +  Y +K  L       G +V++  + G +  A  F+ D   + D  +W  
Sbjct: 405 EEGKWCFRLMQEYGIKPSLKH----YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 460

Query: 231 MLRA 234
           +L A
Sbjct: 461 LLGA 464


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 212/669 (31%), Positives = 327/669 (48%), Gaps = 79/669 (11%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA--LAAVAGTDNLNLGQQIHGT 357
           W   +SG  + G +   +  F  M+          F++A  L   AG  ++  G++IHG 
Sbjct: 92  WTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGW 151

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            L+SG    V++ N++++MY+K G                RA  ++ +    S  I + A
Sbjct: 152 ILRSGVCPDVVLCNAVLDMYAKCG----------DHGRARRAFGAMAQKDATSWNIVIRA 201

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
              D                  G +  A  LF+     D+++WN ++ G +   ++ +AL
Sbjct: 202 CLQD------------------GDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEAL 243

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
                M  +G      T +      G L     G+Q+H   + +  E D  V   ++DMY
Sbjct: 244 GRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMY 303

Query: 538 VKCGAMVDAQSIFN---DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            KCG M  A SIF+   D       AW+TM++G V NG E+ AL  + +M   GV   +F
Sbjct: 304 CKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQF 363

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
               +  A +    +EQGRQ+H  + KL    D  +  ++VDMY+K G++EDA  +F+  
Sbjct: 364 ILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA 423

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             +N  LW  ML   A HG G   L++F  MKA  + P+ +T + VLSACS++GLVS+ Y
Sbjct: 424 QTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGY 483

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             F+LM+E+YGI P  EHY+ +VD  GRAG   +A   I        A + + LL ACR+
Sbjct: 484 HYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRL 543

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADL 834
               E  +  +EKL+ LE +D+ +YVL+SN++A  N+W D    R  MK + V+K P   
Sbjct: 544 HKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQS 603

Query: 835 -----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                  I+A +E L++R+KE GY   TD V+ D+EEE++E +L
Sbjct: 604 WIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSL 663

Query: 872 YYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHL 908
            +HSEKLA A+G+ISTP  + +                      +++E +  +  RFHH 
Sbjct: 664 KFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHF 723

Query: 909 RDGMCPCAD 917
           +DG C C D
Sbjct: 724 KDGQCSCED 732



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 165/391 (42%), Gaps = 49/391 (12%)

Query: 403 LPEG--LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           LPE       K IH  +++    + S ++  L +          A  +F+      L  W
Sbjct: 43  LPEAGACAAKKAIHRQSVRGCVPSSSVIARGLHN----------AHRVFDGTPTRSLPAW 92

Query: 461 NAMIFGYILSNNSHKALELFSHM--HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            ++I G          +  F+ M         +   +A  ++ C  L  ++ G+++H + 
Sbjct: 93  TSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWI 152

Query: 519 MKSGFELDLCVSSGILDMYVKC-------------------------------GAMVDAQ 547
           ++SG   D+ + + +LDMY KC                               G +V A 
Sbjct: 153 LRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGAT 212

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F++    D  +W T++SG + +G    AL    QM  +GV    +T++++   +  L+
Sbjct: 213 QLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLS 272

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ---MDMRNTVLWNA 664
           + + GRQ+H  ++      D FVG SL+DMY KCG +E A  +F +           W+ 
Sbjct: 273 SRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWST 332

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           M+ G  Q+G  EE L+ F  M   GV         V SAC+  G+V +  +  H   EK 
Sbjct: 333 MVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQ-VHGFVEKL 391

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
           G   +    S +VD   ++G  ++A  +  S
Sbjct: 392 GHRFDAPLASAIVDMYSKSGSLEDACRIFRS 422



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 209/517 (40%), Gaps = 107/517 (20%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI--TFTSRLTLAP 164
           A R+FD  P R L +W SI++  A  G        +G R F  + +    T  +   LA 
Sbjct: 77  AHRVFDGTPTRSLPAWTSIISGCAREGRH-----ADGMRAFAEMLDECGATAPNAFVLAG 131

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L+ C   G V +   +HG+ L+ G+  D  +  A++++Y+K G    A+  F  M ++D
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKD 191

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
              W +++RA  ++G       LF          D+ S++                    
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLF----------DESSLR-------------------- 221

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                      +V  WN  +SG ++ G    A+     M+R+ V + + T+ +  A    
Sbjct: 222 -----------DVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGL 270

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------------- 381
             + +LG+Q+HG  + +       VG SL++MY K G                       
Sbjct: 271 LSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAW 330

Query: 382 --CVCG-----------------LR----TDQFTLASVLRASSSLPEGL-HLSKQIHVHA 417
              V G                 LR      QF L SV  AS+    G+    +Q+H   
Sbjct: 331 STMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSV--ASACANAGMVEQGRQVHGFV 388

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            K     D+ +++A++D+Y ++GS+ +A  +F +    ++A W  M+  Y        AL
Sbjct: 389 EKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMAL 448

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSG 532
           E+FS M       +EIT+   + AC    ++  G          Y +    E   C    
Sbjct: 449 EIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNC---- 504

Query: 533 ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           ++D+Y + G +  A++   +   + + V W T++S C
Sbjct: 505 MVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSAC 541



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD---RDLISWNSILA 127
           LG+  H R++ +    D F+  +LM MY +CG +  A  +FD+  D       +W++++A
Sbjct: 276 LGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVA 335

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y  +G    E   E FR  R LRE +    +  L  +   C ++G V     VHG+  K
Sbjct: 336 GYVQNG--REEEALEFFR--RMLREGVP-AGQFILTSVASACANAGMVEQGRQVHGFVEK 390

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G  +D  ++ A+V++YSK G + +A  +F   Q ++V LW  ML +YA +G G     +
Sbjct: 391 LGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEI 450

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG 274
           F  +    + P++ ++  VL   S  G
Sbjct: 451 FSRMKAEKIMPNEITLVAVLSACSHSG 477



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 153/395 (38%), Gaps = 85/395 (21%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS--------------- 103
           +LR      D+  G+  H  IL S   PD  L N ++ MY++CG                
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKD 191

Query: 104 ----------------LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF-RL 146
                           LV A +LFD+   RD+ SWN+I++     G     + TE   RL
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHG-----HTTEALGRL 246

Query: 147 FRSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
            + +R  +TF++   ++   L   LSS  +     +HG  +   L  D FV  +L+++Y 
Sbjct: 247 QQMVRAGVTFSNYTYSMVFALAGLLSSRDL--GRQLHGRVVVAVLEEDAFVGCSLMDMYC 304

Query: 206 KFGKIREAKFLFD---GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL------ 256
           K G++  A  +FD      E     W  M+  Y +NG  EE    F  + R G+      
Sbjct: 305 KCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFI 364

Query: 257 -------CPDD---ESVQCVLGVISDLGKRHEEQVQAY-------------AIKLLLYNN 293
                  C +    E  + V G +  LG R +  + +              A ++     
Sbjct: 365 LTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQ 424

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTD 346
             NV LW   L  Y   G    A+E F  M    +  + +T +  L+A +       G  
Sbjct: 425 TKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYH 484

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             NL Q+ +G    +  Y      N ++++Y + G
Sbjct: 485 YFNLMQEEYGIVPNTEHY------NCMVDLYGRAG 513


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 228/683 (33%), Positives = 347/683 (50%), Gaps = 78/683 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A++ +V MI   +  +S TF   L + A
Sbjct: 86  YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK G    + V  SLI+MY + G     R +              
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG-----RLED------------- 187

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                       H + + +     VS TALI  Y   G +  A+ LF+     D+ +WNA
Sbjct: 188 -----------AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY  + N  +ALELF  M  +  R DE T+ T V AC     ++ G+Q+H +    G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  +L + + ++D+Y KCG +  A  +F  +P  D ++W T+I G         AL ++ 
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAK 640
           +M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAK
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+IE A+ +F  +  ++   WNAM+ G A HG  + +  LF  M+  G++PD +TF+G+
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS++G++      F  M + Y + P++EHY  ++D LG +G  KEA E+I  M  E 
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP 536

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              +  +LL AC++ G+ E G+  AE L+ +EP +  +YVLLSNI+A+A +W++V   R 
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRA 596

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
            +  K +KK P                          I+  +E +   +++ G+VPDT  
Sbjct: 597 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------K 897
           VL ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716

Query: 898 EPLYA---NRFHHLRDGMCPCAD 917
             + A    RFHH RDG+C C D
Sbjct: 717 REIIARDRTRFHHFRDGVCSCND 739



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 242/559 (43%), Gaps = 50/559 (8%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN---IYSKFGKIREAKFLFDGM 220
           P L L  +   + +   +H   +KIGL    +    L+    +   F  +  A  +F  +
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-E 279
           QE ++++W  M R +A +        L+V +   GL P+  +   VL   +      E +
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
           Q+  + +KL     + ++ +    +S Y+Q G    A + F      +   D V++   +
Sbjct: 155 QIHGHVLKL---GCDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALI 207

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------CVCGLR 387
              A    +   Q++            V+  N++I+ Y++ G                +R
Sbjct: 208 KGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D+ T+ +V+ A +     + L +Q+H+    +   ++  +  ALID+Y + G +  A  
Sbjct: 264 PDESTMVTVVSACAQ-SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LFE     D+ +WN +I GY   N   +AL LF  M  SGE  +++T+ + + AC  L  
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382

Query: 508 LKQGKQMHAYAMK--SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +  G+ +H Y  K   G      + + ++DMY KCG +  A  +FN I      +W  MI
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   +G  D +  ++ +MR  G+ PD+ TF  L+ A S    L+ GR I   + + D  
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ-DYK 501

Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR--------NTVLWNAMLVGLAQHGNG 675
             P +     ++D+    G       LFK+ +          + V+W ++L     HGN 
Sbjct: 502 MTPKLEHYGCMIDLLGHSG-------LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554

Query: 676 EETLKLFEDMKAHGVEPDS 694
           E      E++    +EP++
Sbjct: 555 ELGESFAENLIK--IEPEN 571



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 57/343 (16%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +L      D ++  +L++MY + G L  A ++FDK P RD++S+ +++  YA 
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212

Query: 132 SG------------------------EGNAE--NVTEGFRLFRSLRESITFTSRLTLAPL 165
            G                         G AE  N  E   LF+ + ++       T+  +
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           +  C  SG +     VH +    G   +  +  AL+++YSK G++  A  LF+ +  +DV
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG----------- 274
           + W  ++  Y      +E   LF ++ RSG  P+D ++  +L   + LG           
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392

Query: 275 --KRHEEQVQAYAIKLLLYNNNS------------NVVL------WNKKLSGYLQVGDNH 314
             KR +    A +++  L +  +            N +L      WN  + G+   G   
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            + + F  M +  +Q D +TF+  L+A + +  L+LG+ I  T
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 12/212 (5%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H  I +     +  + N L+ +YS+CG L  A  LF+++P +D+ISWN+++  Y 
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--I 188
           H          E   LF+ +  S    + +T+  +L  C   G +     +H Y  K   
Sbjct: 344 H-----MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+     +  +L+++Y+K G I  A  +F+ +  + +  W  M+  +A +G  +  F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458

Query: 249 VDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
             + + G+ PDD +   +L   S     DLG+
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 249/848 (29%), Positives = 391/848 (46%), Gaps = 166/848 (19%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR----EAKFLF 217
            A LL+L  ++    A   +H +A+K GL+   ++   L++ Y++ G  R    EA+ LF
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 218 DGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           D +    R+   W  +L  YA++G   +   +F  +      P+ ++V            
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQM------PERDAVS----------- 130

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                                   W   + G  + G    A++ F++M+   +       
Sbjct: 131 ------------------------WTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFML 166

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
              L++ A T+   +G+++H   +K G  S V V NS++ MY K    CG   D  T  +
Sbjct: 167 TNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGK----CG---DAETARA 219

Query: 396 V-----LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           V     +R+ SS                            A++ +Y   G M  A  +FE
Sbjct: 220 VFERMKVRSESSW--------------------------NAMVSLYTHQGRMDLALSMFE 253

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLK 509
           N +   + +WNA+I GY  +     AL+ FS M T S    DE T+ + + AC  L MLK
Sbjct: 254 NMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLK 313

Query: 510 QGKQMHAYAMKSGF---------------------------------ELDLCVSSGILDM 536
            GKQMH+Y +++G                                  +L++   + +L+ 
Sbjct: 314 MGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEG 373

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           YVK G    A+ +F+ +   D +AWT MI G   NG+ D A+ ++  M  SG  P+  T 
Sbjct: 374 YVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTL 433

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           A ++ A + L  L  G+QIH   I+        V  +++ +YA+ G++  A  +F Q+  
Sbjct: 434 AAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW 493

Query: 657 RN-TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
           R  TV W +M+V LAQHG GE+ + LFE+M   GV+PD VT+IGV SAC++ G + +   
Sbjct: 494 RKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKR 553

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            +  M  ++GI PE+ HY+ +VD L RAG   EA E I  MP      +  +LL ACRV+
Sbjct: 554 YYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVR 613

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            + +  +  AEKL++++P +S AY  L+N+++A  +W+D        K K VKK+     
Sbjct: 614 KNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSW 673

Query: 833 --------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                               D I  K   + + IK+ G+VPD + VL DV++E KE  L 
Sbjct: 674 THVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLS 733

Query: 873 YHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLR 909
            HSEKLA A+GLISTP  + +                     + ++E +   A RFHH R
Sbjct: 734 RHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFR 793

Query: 910 DGMCPCAD 917
           DG C C D
Sbjct: 794 DGYCSCKD 801



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/644 (24%), Positives = 291/644 (45%), Gaps = 87/644 (13%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F  N+L++MY++ G L  AR +F +MP+RD +SW  ++      G   A    +  + F 
Sbjct: 98  FTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVV-----GLNRAGRFWDAVKTFL 152

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            +       S+  L  +L  C ++        VH + +K+GL     V+ +++ +Y K G
Sbjct: 153 DMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCG 212

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
               A+ +F+ M+ R    W  M+  Y   G  +    +F ++                 
Sbjct: 213 DAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENM----------------- 255

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SN 327
                    EE+               ++V WN  ++GY Q G +  A++ F  M+  S+
Sbjct: 256 ---------EER---------------SIVSWNAIIAGYNQNGLDDMALKFFSRMLTASS 291

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           ++ D  T    L+A A    L +G+Q+H   L++G   +  + N+LI+ Y+K G V    
Sbjct: 292 MEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSV---- 347

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                                 +++I   A+  D    SF  TAL++ Y + G   +A  
Sbjct: 348 --------------------ETARRIMDKAVVADLNVISF--TALLEGYVKLGDTKQARE 385

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+  +  D+  W AMI GY  +  + +A+ELF  M  SG   +  T+A  + AC  L  
Sbjct: 386 VFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAY 445

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMIS 566
           L  GKQ+H  A++S  E  + VS+ I+ +Y + G++  A+ +F+ I    + V WT+MI 
Sbjct: 446 LGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIV 505

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
               +G  + A+ ++ +M   GV PD  T+  +  A +    +++G++ +  ++  +   
Sbjct: 506 ALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLN-EHGI 564

Query: 627 DPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFE 683
            P +     +VD+ A+ G + +A+   ++M +  +TV+W ++L       N +  L    
Sbjct: 565 VPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNAD--LAELA 622

Query: 684 DMKAHGVEPDS----VTFIGVLSACSYTGLVSEAYENFHLMREK 723
             K   ++PD+         V SAC   G  ++A   + L ++K
Sbjct: 623 AEKLLSIDPDNSGAYSALANVYSAC---GRWNDAARIWKLRKDK 663



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 13/215 (6%)

Query: 75  THARILNSSQIPDRFLTN--NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           T  RI++ + + D  + +   L+  Y + G    AR +FD M +RD+I+W +++  Y  +
Sbjct: 349 TARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQN 408

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+ +     E   LFRS+  S    +  TLA +L  C S  Y+   + +H  A++     
Sbjct: 409 GQND-----EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQ 463

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              VS A++ +Y++ G +  A+ +FD +   ++ V W  M+ A A++G GE+   LF ++
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEM 523

Query: 252 HRSGLCPDDESV-----QCVLGVISDLGKRHEEQV 281
            R G+ PD  +       C      D GKR+ EQ+
Sbjct: 524 LRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQM 558



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 154/395 (38%), Gaps = 96/395 (24%)

Query: 58  SILRHAISTSDLLLGKSTHARILN---SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           ++L    +T    +G+  H+ ++    SS +P   + N+++ MY +CG    AR +F++M
Sbjct: 168 NVLSSCAATEARGIGRKVHSFVIKLGLSSCVP---VANSVLYMYGKCGDAETARAVFERM 224

Query: 115 PDRDLISWNSILAAYAHSGEGNA-----ENVTE---------------------GFRLF- 147
             R   SWN++++ Y H G  +      EN+ E                       + F 
Sbjct: 225 KVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFS 284

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           R L  S       T+  +L  C +   +   + +H Y L+ G+ +   +  AL++ Y+K 
Sbjct: 285 RMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKS 344

Query: 208 GKI---------------------------------REAKFLFDGMQERDVVLWKVMLRA 234
           G +                                 ++A+ +FD M  RDV+ W  M+  
Sbjct: 345 GSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVG 404

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKR---------HEEQ 280
           Y +NG  +E   LF  + RSG  P+  ++  VL   + L     GK+          E+ 
Sbjct: 405 YEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQS 464

Query: 281 VQAYAIKLLLYNNNSNV----------------VLWNKKLSGYLQVGDNHGAIECFVNMI 324
           V      + +Y  + +V                V W   +    Q G    AI  F  M+
Sbjct: 465 VSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEML 524

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           R  V+ D VT++   +A      ++ G++ +   L
Sbjct: 525 RVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQML 559



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 8/180 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  GK  H R + S Q     ++N ++T+Y+R GS+  ARR+FD++  R
Sbjct: 435 AVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR 494

Query: 118 -DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            + ++W S++ A A  G G      +   LF  +        R+T   +   C  +G++ 
Sbjct: 495 KETVTWTSMIVALAQHGLGE-----QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFID 549

Query: 177 ASETVHGYAL-KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             +  +   L + G+V +      +V++ ++ G + EA      M    D V+W  +L A
Sbjct: 550 KGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 226/708 (31%), Positives = 339/708 (47%), Gaps = 115/708 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV  ++  +  + +    H A+  F  M+   +  D+     A+ A AG   L   +Q+H
Sbjct: 78  NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVH 137

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
           G    SGF S   V +SL++MY K    C    D                          
Sbjct: 138 GIASVSGFDSDSFVQSSLVHMYIK----CNQIRD-------------------------A 168

Query: 416 HAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLF-ENKDGF---DLATWNAMIFGYILS 470
           H + +       VS +AL+  Y R G + EA+ LF E  D     +L +WN MI G+  S
Sbjct: 169 HRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHS 228

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +A+ +F  MH  G   D  TI++ + A G L  L  G  +H Y +K G   D CVS
Sbjct: 229 GLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVS 288

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDD-------------------------------- 558
           S ++DMY KC    +   +F+ +   D                                 
Sbjct: 289 SALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGME 348

Query: 559 ---VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              V+WT+MI+ C  NG +  AL ++ +M+++GV P+  T   L+ A   + AL  G+  
Sbjct: 349 LNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAA 408

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H   ++   S+D +VG +L+DMYAKCG I+ + I F  +  +N V WNA++ G A HG  
Sbjct: 409 HCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKA 468

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           +E +++F+ M+  G +PD ++F  VLSACS +GL  E    F+ M  KYGIE  VEHY+ 
Sbjct: 469 KEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYAC 528

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +V  L RAG+ ++A  +I  MP    A +  ALL +CRV  +   G+  AEKL  LEP +
Sbjct: 529 MVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSN 588

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
              Y+LLSNI+A+   W++V   R  MK K ++K+P                        
Sbjct: 589 PGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQM 648

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS-- 890
             I  K++ L   +K+ GY P+ +FVL DVEE++KE+ L  HSEKLA  +GL++TPP   
Sbjct: 649 TQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYP 708

Query: 891 -------------SVILS-----NKEPLY---ANRFHHLRDGMCPCAD 917
                         V++       +  ++    NRFHH ++G C C D
Sbjct: 709 LQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGD 756



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 172/673 (25%), Positives = 284/673 (42%), Gaps = 110/673 (16%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           +L + +L+LL  +Q + F+  +S++   S  R A            HA IL +    D  
Sbjct: 2   SLSAQALALLDSVQHTIFNCLNSTTASLSQTRQA------------HAHILKTGLFNDTH 49

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L   L++ Y+       A  + D +P+ ++ S+++++ A++   + +    T    L R 
Sbjct: 50  LATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRG 109

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L           L   +K C     +  +  VHG A   G   D FV  +LV++Y K  +
Sbjct: 110 L-----MPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQ 164

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           IR+A  +FD M E DVV W  ++ AYA  G  +E   LF ++  SG+ P           
Sbjct: 165 IRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP----------- 213

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     N++ WN  ++G+   G    A+  F++M     +
Sbjct: 214 --------------------------NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            D  T    L AV   ++L +G  IHG  +K G  S   V ++LI+MY K  C   +   
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEM--- 304

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                     S    +  H+               D     A I    RNG +  +  LF
Sbjct: 305 ----------SQVFDQMDHM---------------DVGSCNAFIFGLSRNGQVESSLRLF 339

Query: 450 EN-KDG---FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              KD     ++ +W +MI     +    +ALELF  M  +G + + +TI   + ACG +
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNI 399

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L  GK  H ++++ G   D+ V S ++DMY KCG +  ++  F+ IP  + V W  +I
Sbjct: 400 AALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVI 459

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ----------I 615
           +G   +G+   A+ I+  M+ SG  PD  +F  ++ A S     E+G            I
Sbjct: 460 AGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGI 519

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
            A +    C         +V + ++ G +E AY + ++M +  +  +W A+L     H N
Sbjct: 520 EARVEHYAC---------MVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNN 570

Query: 675 ---GE-ETLKLFE 683
              GE    KLFE
Sbjct: 571 VSLGEVAAEKLFE 583



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 187/391 (47%), Gaps = 39/391 (9%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L + Q T+ + L ++++    L  ++Q H H +K     D+ ++T L+  Y  N   A+A
Sbjct: 11  LDSVQHTIFNCLNSTTA---SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADA 67

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             + +     ++ +++ +I+ +   +  H AL  FS M T G   D   + +AVKAC  L
Sbjct: 68  TLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             LK  +Q+H  A  SGF+ D  V S ++ MY+KC  + DA  +F+ +  PD V+W+ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 566 S-----GCVD------------------------------NGEEDLALSIYHQMRLSGVV 590
           +     GCVD                              +G    A+ ++  M L G  
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD  T + ++ A   L  L  G  IH  +IK    SD  V  +L+DMY KC    +   +
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQV 307

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F QMD  +    NA + GL+++G  E +L+LF  +K  G+E + V++  +++ CS  G  
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
            EA E F  M +  G++P       L+ A G
Sbjct: 368 IEALELFREM-QIAGVKPNSVTIPCLLPACG 397


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 320/609 (52%), Gaps = 78/609 (12%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC-------- 437
           +R  + T+++++ A+S+L +   L KQ H   ++    A++FV + L+D+Y         
Sbjct: 136 VRPSRITMSTMVMAASALGDRA-LGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDA 194

Query: 438 -----------------------RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
                                  R   + EA  LFE     D  TW  M+ G+  +    
Sbjct: 195 KRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLES 254

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +ALE+F  M   G  +D+ T  + + ACG L  L+QGKQ+HAY +++ ++ ++ V S ++
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY KC ++  A+++F  +   + ++WT +I G   NG  + A+ ++ +M+  G+ PD++
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T   ++ + + L +LE+G Q H   +         V  +LV +Y KCG+IEDA+ LF +M
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              + V W A++ G AQ G  +ET+ LFE M A GV+PD VTFIGVLSACS  G V +  
Sbjct: 435 SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR 494

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             FH M++ +GI P  +HY+ ++D   R+G+ KEA E I  MP    A     LL ACR+
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
           +GD E GKW AE L+ ++P + ++YVLL ++ AA  QW++V   R  M+ + VKK+P   
Sbjct: 555 RGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCS 614

Query: 832 --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                               +  I+ K+E L  ++ E GY PD   VL DV + +K   +
Sbjct: 615 WIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMV 674

Query: 872 YYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANRFHHL 908
            +HSEKLA A+GLI  P   P  ++                  ++ ++ L   A RFH  
Sbjct: 675 SHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKF 734

Query: 909 RDGMCPCAD 917
            DG+C C D
Sbjct: 735 SDGVCSCGD 743



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 128/617 (20%), Positives = 229/617 (37%), Gaps = 153/617 (24%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           SSQ+ ++L  A  T   + G + H  IL +    P  +L N+L+T Y + G    ARR+F
Sbjct: 6   SSQYAALLSAAARTEPHVAG-ALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVF 64

Query: 112 DKMPDRDLISWNSILAAYAHS--------------------------GEGNAENVTEGFR 145
           D MP  +L ++N++L+  AH+                          G     +  +  R
Sbjct: 65  DAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVR 124

Query: 146 LFRSL--RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           ++ +L   +S    SR+T++ ++    + G     +  H   L++G   + FV   LV++
Sbjct: 125 VYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDM 184

Query: 204 YSKFG-------------------------------KIREAKFLFDGMQERDVVLWKVML 232
           Y+K                                  + EA+ LF+ M +RD + W  M+
Sbjct: 185 YAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMV 244

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLY 291
             + +NG   E   +F  +   G+  D  +   +L     L    + +Q+ AY I+   Y
Sbjct: 245 TGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR-Y 303

Query: 292 NNN-----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
           ++N                              N++ W   + GY Q G +  A+  F  
Sbjct: 304 DDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSE 363

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M R  +  D  T    +++ A   +L  G Q H   L SG    + V N+L+ +Y K G 
Sbjct: 364 MQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG- 422

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                              S+ +   L  ++  H        D    TAL+  Y + G  
Sbjct: 423 -------------------SIEDAHRLFDEMSFH--------DQVSWTALVSGYAQFGRA 455

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            E                                ++LF  M   G + D +T    + AC
Sbjct: 456 KE-------------------------------TIDLFEKMLAKGVKPDGVTFIGVLSAC 484

Query: 503 GCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVA 560
                +++G+   H+     G        + ++D+Y + G + +A+     +P  PD + 
Sbjct: 485 SRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIG 544

Query: 561 WTTMISGCVDNGEEDLA 577
           W T++S C   G+ ++ 
Sbjct: 545 WGTLLSACRLRGDMEIG 561


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 225/682 (32%), Positives = 346/682 (50%), Gaps = 76/682 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA  +       N ++WN  + G+    D   ++  +V M+   +  +S TF   L + A
Sbjct: 16  YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK GF   + V  SLI+MY     V   R +              
Sbjct: 76  KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMY-----VQNWRLED------------- 117

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
                 + ++   +   D V+     TALI  Y   G +  A+ LF+     D+ +WNAM
Sbjct: 118 ------AYKVFDRSSHRDVVS----YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAM 167

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  +    +ALELF  M     R DE T  T + AC     ++ G+Q+H++    GF
Sbjct: 168 ISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGF 227

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           + +L + + ++D+Y KCG +  A  +F  +   D ++W T+I G         AL ++ +
Sbjct: 228 DSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 287

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAKC 641
           M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAKC
Sbjct: 288 MLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 347

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+IE A+ +F  M  ++   WNAM+ G A HG  + +  LF  M+  G+EPD +TF+G+L
Sbjct: 348 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLL 407

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS++G++      F  M + Y + P++EHY  ++D LG +G  KEA E+I +M  E  
Sbjct: 408 SACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPD 467

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             +  +LL AC++ G+ E  +  A+ L+ +EP + S+Y+LLSNI+A+A +W+DV   R  
Sbjct: 468 GVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRAL 527

Query: 822 MKRKNVKKDPA-------DLIFAKVEG----------------LIKRIKEGGYVPDTDFV 858
           +  K +KK P         ++F  V G                +   ++E G+VPDT  V
Sbjct: 528 LNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEV 587

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------KE 898
           L ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K 
Sbjct: 588 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKR 647

Query: 899 PLYA---NRFHHLRDGMCPCAD 917
            + A    RFHH RDG+C C D
Sbjct: 648 EIVARDRTRFHHFRDGVCSCND 669



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 38/266 (14%)

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           ++LCV S   D       +  A S+F  I  P+ + W TMI G   + +   +L++Y  M
Sbjct: 2   IELCVPSPHFD------GLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCM 55

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
              G++P+ +TF  L+K+ +      +G+QIH  ++KL    D +V  SL+ MY +   +
Sbjct: 56  VSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRL 115

Query: 645 EDAY-------------------------------ILFKQMDMRNTVLWNAMLVGLAQHG 673
           EDAY                                LF ++ +++ V WNAM+ G A+ G
Sbjct: 116 EDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETG 175

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +E L+LFE+M    V PD  T++ VLSAC+++G + E     H   + +G +  ++  
Sbjct: 176 CYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSI-ELGRQVHSWVDDHGFDSNLKIV 234

Query: 734 SFLVDALGRAGRTKEAGELILSMPFE 759
           + L+D   + G  + A  L   + ++
Sbjct: 235 NALIDLYSKCGEVETACGLFQGLSYK 260



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G +  A++LFD++P +D++SWN++++ YA +G    
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETG---- 175

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
               E   LF  + +        T   +L  C  SG +     VH +    G   +  + 
Sbjct: 176 -CYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIV 234

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++YSK G++  A  LF G+  +DV+ W  ++  Y      +E   LF ++ RSG  
Sbjct: 235 NALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 294

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLL-------------- 290
           P+D ++  VL   + LG             KR +    A +++  L              
Sbjct: 295 PNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 354

Query: 291 --YNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
             +N+  + ++  WN  + G+   G    + + F  M +  ++ D +TF+  L+A + + 
Sbjct: 355 QVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSG 414

Query: 347 NLNLGQQI 354
            L+LG+ I
Sbjct: 415 MLDLGRHI 422



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 141/340 (41%), Gaps = 67/340 (19%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + + + WN+++  +A S +           L+  +       +  T  
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDP-----VSSLTLYVCMVSLGLLPNSYTFP 68

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY------------------- 204
            LLK C  S      + +HG  LK+G   D +V  +L+++Y                   
Sbjct: 69  FLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHR 128

Query: 205 ------------SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
                       +  G IR A+ LFD +  +DVV W  M+  YAE G  +E   LF ++ 
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYA----IKLL-----LYN------ 292
           +  + PD+ +   VL   +     +LG++    V  +     +K++     LY+      
Sbjct: 189 KMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVE 248

Query: 293 ---------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                    +  +V+ WN  + GY  +     A+  F  M+RS    + VT L  L A A
Sbjct: 249 TACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACA 308

Query: 344 GTDNLNLGQQIHGTTLK--SGFYSAVIVGNSLINMYSKMG 381
               +++G+ IH    K   G  +A  +  SLI+MY+K G
Sbjct: 309 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 348



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 12/229 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S + ++L     +  + LG+  H+ + +     +  + N L+ +YS+CG +  A  LF  
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +  +D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 257 LSYKDVISWNTLIGGYTH-----MNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLG 311

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+     +  +L+++Y+K G I  A  +F+ M  + +  W  M
Sbjct: 312 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 371

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +A +G  +  F LF  + + G+ PDD +   +L   S     DLG+
Sbjct: 372 IFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR 420


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 222/748 (29%), Positives = 363/748 (48%), Gaps = 131/748 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV WN  ++ Y Q G +  A+  +  M    +  D VTF+  L A +   +L  G++IH
Sbjct: 74  NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIH 130

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
                SG  S   + N+L+ MY++ G V                                
Sbjct: 131 NRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWS 190

Query: 384 ----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                     C ++ +  T  +V+   S+ PE L   ++IH   + N   +D  V+TALI
Sbjct: 191 GALRIFKEMKCDMKPNSTTYINVISGFST-PEVLPEGRKIHAEIVANGFDSDLVVATALI 249

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           ++Y + GS  EA  +F+     D+ +WN MI  Y+ + + H+ALEL+  +   G +  + 
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKA 309

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T  + + AC  +  L QG+ +H++ ++ G + ++ V++ +++MY KCG++ +A+ +FN +
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369

Query: 554 PAPDDVAWTT----------------------------------MISGCVDNGEEDLALS 579
              D VAW+T                                  MI+  V NG    A+ 
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMK 429

Query: 580 IYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
           I+ +M   +G+ PD  TF  +++A + L  L + + +HA + + +  S+  V  +L++MY
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           A+CG++E+A  LF     +  V W AM+   +Q+G   E L LF++M   GV+PD VT+ 
Sbjct: 490 ARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYT 549

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            +L  C++ G + + +  F  M E +G+ P  +H++ +VD LGR+GR  +A EL+ SMPF
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E         L ACR+ G  E G+  AE++  L+P  ++ Y+ +SNI+AA   W+ V S 
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASV 669

Query: 819 RGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------------------GYVPD 854
           R +M+ + +KK P  L F +V+G +     G                        GYVPD
Sbjct: 670 RKKMEERGLKKLPG-LSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPD 728

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLIST----PPSSVI----------------- 893
           T  VL DV E EKE  L YHSEK+A A+GL+S+     P  V+                 
Sbjct: 729 TKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIA 788

Query: 894 -LSNKEPLY--ANRFHHL-RDGMCPCAD 917
            ++ ++ +    NRFH    DG C C D
Sbjct: 789 RIAGRDIILRDCNRFHRFSSDGKCSCGD 816



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 171/660 (25%), Positives = 299/660 (45%), Gaps = 78/660 (11%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L    S  D+  G++ H RI  S    D  + N L++MY +C SLV AR +F+ M 
Sbjct: 10  FLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMD 69

Query: 116 --DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
              R+++SWN+++AAYA +G       TE   L+  +      T  +T   +L  C S  
Sbjct: 70  WRQRNVVSWNAMIAAYAQNGHS-----TEALVLYWRMNLQGLGTDHVTFVSVLGACSS-- 122

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +H      GL   + ++ ALV +Y++FG + +AK +F  +Q RD   W  ++ 
Sbjct: 123 -LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG------VISDLGKRHEEQV-----Q 282
           A++++G       +F ++ +  + P+  +   V+       V+ +  K H E V      
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240

Query: 283 AYAIKLLLYN------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
              +   L N                     ++V WN  +  Y+Q GD H A+E +  + 
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
               +    TF+  L A +    L  G+ +H   L+ G  S V V  +L+NMY+K G   
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG--- 357

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG---S 441
                            SL E   +      +A+KN    D+   + LI  Y  NG    
Sbjct: 358 -----------------SLEEARKV-----FNAMKNR---DAVAWSTLIGAYASNGYGKD 392

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH-TSGERLDEITIATAVK 500
             +A  +F+     D   WNAMI  Y+ +  +  A+++F  M   +G + D +T    ++
Sbjct: 393 ARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLE 452

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L  L + K +HA   +S  E ++ V++ +++MY +CG++ +A+ +F        V+
Sbjct: 453 ACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVS 512

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           WT M++     G    AL ++ +M L GV PD+ T+  ++   +   +LEQG +   ++ 
Sbjct: 513 WTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMA 572

Query: 621 KLDC---SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +L     ++D F   ++VD+  + G + DA  L + M    + V W   L     HG  E
Sbjct: 573 ELHGLAPTADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 236/506 (46%), Gaps = 90/506 (17%)

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---- 384
           Q D+VTFL  L + +   ++  G+ +H     S F    +VGN+LI+MY K   +     
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 385 -----------------------------------------GLRTDQFTLASVLRASSSL 403
                                                    GL TD  T  SVL A SSL
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 404 PEGLHLSKQIHVHAIKNDTVADSF--VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            +G  +  ++    +      DSF  ++ AL+ +Y R GS+ +A+ +F++    D  +WN
Sbjct: 124 AQGREIHNRVFYSGL------DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           A+I  +  S +   AL +F  M     + +  T    +       +L +G+++HA  + +
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN 236

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           GF+ DL V++ +++MY KCG+  +A+ +F+ +   D V+W  MI   V NG+   AL +Y
Sbjct: 237 GFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELY 296

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
            ++ + G    + TF  ++ A S + AL QGR +H+++++    S+  V  +LV+MYAKC
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356

Query: 642 GNIEDAYILFKQMD----------------------------------MRNTVLWNAMLV 667
           G++E+A  +F  M                                    R+T+ WNAM+ 
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMIT 416

Query: 668 GLAQHGNGEETLKLFEDMK-AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
              Q+G     +K+F +M  A G++PD+VTFI VL AC+  G +SE  +  H    +  +
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV-KALHAQISESEL 475

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGEL 752
           E  V   + L++   R G  +EA  L
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAERL 501



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 242/534 (45%), Gaps = 41/534 (7%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           + S L  G+  H R+  S     + L N L+TMY+R GS+  A+R+F  +  RD  SWN+
Sbjct: 119 ACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ A++ SG+ +        R+F+ ++  +   S  T   ++    +   +     +H  
Sbjct: 179 VILAHSQSGDWSG-----ALRIFKEMKCDMKPNS-TTYINVISGFSTPEVLPEGRKIHAE 232

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +  G   D  V+ AL+N+Y K G   EA+ +FD M++RD+V W VM+  Y +NG   E 
Sbjct: 233 IVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEA 292

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN------NSNVV 298
             L+  L   G      +   +LG  S         V+A A   L++++      +S V 
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACS--------SVKALAQGRLVHSHILERGLDSEVA 344

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           +    ++ Y + G    A + F N +++    D+V +   + A A        ++     
Sbjct: 345 VATALVNMYAKCGSLEEARKVF-NAMKNR---DAVAWSTLIGAYASNGYGKDARKARKVF 400

Query: 359 LKSGFYSAVIVGNSLINMYSKMGC-------------VCGLRTDQFTLASVLRASSSLPE 405
            + G     I  N++I  Y + GC               GL+ D  T  +VL A +SL  
Sbjct: 401 DRLGSRD-TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGR 459

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   K +H    +++  ++  V+  LI++Y R GS+ EAE LF       + +W AM+ 
Sbjct: 460 -LSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVA 518

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFE 524
            +       +AL+LF  M   G + D++T  + +  C     L+QG +     A   G  
Sbjct: 519 AFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLA 578

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                 + ++D+  + G + DA+ +   +P  PD VAW T ++ C  +G+ +L 
Sbjct: 579 PTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELG 632



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 7/268 (2%)

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D +T  T + +C     + +G+ +H     S FE D  V + ++ MY KC ++VDA+S+F
Sbjct: 6   DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 551 N--DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
              D    + V+W  MI+    NG    AL +Y +M L G+  D  TF  ++ A S   +
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---S 122

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L QGR+IH  +      S   +  +LV MYA+ G++ DA  +F+ +  R+   WNA+++ 
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            +Q G+    L++F++MK   ++P+S T+I V+S  S   ++ E     H      G + 
Sbjct: 183 HSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEG-RKIHAEIVANGFDS 240

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSM 756
           ++   + L++  G+ G + EA E+   M
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKM 268



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L    S   L   K+ HA+I  S    +  +TN L+ MY+RCGSL  A RLF    
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK 506

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-- 173
           ++ ++SW +++AA++  G        E   LF+ +         +T   +L +C   G  
Sbjct: 507 EKTVVSWTAMVAAFSQYG-----RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSL 561

Query: 174 -----YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVL 227
                Y      +HG A       D F   A+V++  + G++ +AK L + M  E D V 
Sbjct: 562 EQGWRYFTDMAELHGLAPTA----DHF--AAMVDLLGRSGRLFDAKELLESMPFEPDPVA 615

Query: 228 WKVMLRAYAENG---FGEEVFHLFVDLHRSGLCP 258
           W   L A   +G    GE       +L  S   P
Sbjct: 616 WMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 240/841 (28%), Positives = 394/841 (46%), Gaps = 118/841 (14%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ GK  H            F    L+ MY+RCG +  ARR+F  +   D + W S+++ 
Sbjct: 47  LVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISG 106

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +G                 +E++   +R+                          K+
Sbjct: 107 YHRAGR---------------FQEAVCLFTRME-------------------------KM 126

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAE-NGFGEEVFH 246
           G   D     A+V   +  G++ +A+ L   M      V W  ++  YA+ +G   EVF 
Sbjct: 127 GSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFG 186

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------------------ 287
           L+ D+   GL P   +   +L   ++     E  QV A A++                  
Sbjct: 187 LYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYA 246

Query: 288 --------LLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                   +L+++     NVV+WN  L+G ++      AI+ F+ M R  ++ D  T++ 
Sbjct: 247 KCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVS 306

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------- 384
            L A A  D+  LG+Q+   T+K+   +++ V N+ ++M+SK G +              
Sbjct: 307 VLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKD 366

Query: 385 ------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         G+  D+ + A+V+ A S++       KQIH
Sbjct: 367 TVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNI-RATETGKQIH 425

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
             A+K+   ++  V ++LID Y ++G +     +    D   +   N +I G + +N   
Sbjct: 426 CLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNRED 485

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGI 533
           +A++LF  +   G +    T ++ +  C  LL    GKQ+H Y +KSGF   D  V   +
Sbjct: 486 EAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSL 545

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +  Y+K     DA  +  ++P   + V WT ++SG   NG    +L  + +MR   V PD
Sbjct: 546 VGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPD 605

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           E TFA ++KA S +TAL  G++IH  +IK    S      +++DMY+KCG+I  ++  FK
Sbjct: 606 EVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFK 665

Query: 653 QMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           ++  +  + LWN+M++G A++G  +E L LF+ M+   ++ D VTF+GVL AC++ GL+S
Sbjct: 666 ELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLIS 725

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E    F  M + YGI P V+HY+  +D LGR G  +EA E+I  +PF     +    L A
Sbjct: 726 EGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAA 785

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR+  D E G+  A++L+ LEP +SS YVLLSN++AAA  W +   AR  M+ K   K P
Sbjct: 786 CRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFP 845

Query: 832 A 832
            
Sbjct: 846 G 846



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 181/632 (28%), Positives = 291/632 (46%), Gaps = 53/632 (8%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           +  LA  L  C   G + + +  H  A K GL    F + ALVN+Y++ G++ +A+ +F 
Sbjct: 31  QFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFG 90

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           G+   D V W  M+  Y   G  +E   LF  + + G  PD  +   V+  ++ LG+  +
Sbjct: 91  GISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLED 150

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYL-QVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
            +   + +        S+ V WN  +SGY  Q G  H     + +M    +     TF  
Sbjct: 151 ARTLLHRMPA-----PSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------C----- 384
            L+A A       G+Q+H   ++ G  + V VG+SLIN+Y+K GC+        C     
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKN 265

Query: 385 ------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         GL  D+FT  SVL A + L     L +Q+ 
Sbjct: 266 VVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHC-LGRQVQ 324

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              IKN   A  FV+ A +D++ + G++ +A+ LF      D  +WNA++ G   +    
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A+ +   M+  G   DE++ AT + AC  +   + GKQ+H  AMK     +  V S ++
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLI 444

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           D Y K G +   + +   + A   V    +I+G V N  ED A+ ++ Q+   G+ P  F
Sbjct: 445 DFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSF 504

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           TF+ ++   + L +   G+Q+H   +K    + D  VG+SLV  Y K    EDA  L  +
Sbjct: 505 TFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIE 564

Query: 654 M-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           M D +N V W A++ G AQ+G   ++L  F  M+++ V PD VTF  +L ACS    +S+
Sbjct: 565 MPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSD 624

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             E  H +  K G        S ++D   + G
Sbjct: 625 GKE-IHGLIIKSGFGSYKTATSAIIDMYSKCG 655



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 38/324 (11%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+R DQF LA+ L A S L   L   KQ H  A K    + +F + AL+++Y R G + +
Sbjct: 26  GVRPDQFDLAATLSACSRLG-ALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGD 84

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      D   W +MI GY  +    +A+ LF+ M   G   D +T    V A   
Sbjct: 85  ARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTA 144

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTT 563
           L                                   G + DA+++ + +PAP   VAW  
Sbjct: 145 L-----------------------------------GRLEDARTLLHRMPAPSSTVAWNA 169

Query: 564 MISG-CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +ISG    +G E     +Y  MR  G+ P   TFA ++ A++  TA  +GRQ+HA  ++ 
Sbjct: 170 VISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRH 229

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              ++ FVG SL+++YAKCG I DA ++F     +N V+WNAML GL ++    E +++F
Sbjct: 230 GLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMF 289

Query: 683 EDMKAHGVEPDSVTFIGVLSACSY 706
             MK  G+E D  T++ VL AC++
Sbjct: 290 LYMKRLGLEADEFTYVSVLGACAH 313



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 214/465 (46%), Gaps = 20/465 (4%)

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V+ D       L+A +    L  G+Q H    K G  S      +L+NMY++ G V   R
Sbjct: 27  VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86

Query: 388 --------TDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                    D    AS++     +    E + L  ++       D V    V  AL  + 
Sbjct: 87  RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL- 145

Query: 437 CRNGSMAEAEYLFENKDG-FDLATWNAMIFGYI-LSNNSHKALELFSHMHTSGERLDEIT 494
              G + +A  L            WNA+I GY   S   H+   L+  M   G      T
Sbjct: 146 ---GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRST 202

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            A+ + A        +G+Q+HA A++ G + ++ V S ++++Y KCG + DA  +F+   
Sbjct: 203 FASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSG 262

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             + V W  M++G V N  +  A+ ++  M+  G+  DEFT+  ++ A + L +   GRQ
Sbjct: 263 EKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQ 322

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +    IK    +  FV  + +DM++K G I+DA  LF  +  ++TV WNA+LVGL  +  
Sbjct: 323 VQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEE 382

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            EE + + + M   GV PD V+F  V++ACS     +E  +  H +  K+ I       S
Sbjct: 383 DEEAIHMLKGMNLDGVTPDEVSFATVINACSNI-RATETGKQIHCLAMKHSICSNHAVGS 441

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
            L+D   + G  +   +++  +  +AS+ + R +L A  VQ + E
Sbjct: 442 SLIDFYSKHGDVESCRKVLAQV--DASSIVPRNVLIAGLVQNNRE 484



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 259/605 (42%), Gaps = 91/605 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S+L  A + +  + G+  HA  +      + F+ ++L+ +Y++CG +  A  +F
Sbjct: 199 TRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVF 258

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D   +++++ WN++L     +G    E   E  ++F  ++         T   +L  C  
Sbjct: 259 DCSGEKNVVMWNAML-----NGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAH 313

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                    V    +K  +    FV+ A ++++SKFG I +AK LF+ +  +D V W  +
Sbjct: 314 LDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNAL 373

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLL 290
           L     N   EE  H+   ++  G+ PD+ S   V+   S++      +Q+   A+K  +
Sbjct: 374 LVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSI 433

Query: 291 YNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +N+                            S++V  N  ++G +Q      AI+ F  
Sbjct: 434 CSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQ 493

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSK-- 379
           ++R  ++  S TF   L+   G  +  +G+Q+H  TLKSGF +    VG SL+  Y K  
Sbjct: 494 VLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKAR 553

Query: 380 ---------------------MGCVCG---------------------LRTDQFTLASVL 397
                                   V G                     +  D+ T AS+L
Sbjct: 554 MPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASIL 613

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFD 456
           +A S +   L   K+IH   IK+   +    ++A+ID+Y + G +  + E   E K   D
Sbjct: 614 KACSEMT-ALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQD 672

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-- 514
           +  WN+MI G+  +  + +AL LF  M  S  + DE+T    + AC    ++ +G+    
Sbjct: 673 ITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFD 732

Query: 515 ---HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
                Y +    +   C     +D+  + G + +AQ + N++P  PD V W T ++ C  
Sbjct: 733 SMSKVYGIMPRVDHYAC----FIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRM 788

Query: 571 NGEED 575
           + +E+
Sbjct: 789 HKDEE 793



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 124/285 (43%), Gaps = 39/285 (13%)

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G R D+  +A  + AC  L  L  GKQ H  A K G       ++ +++MY +CG + DA
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +F  I  PD V W +MISG    G    A+ ++ +M   G  PD  T   +V A   L
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCA---L 142

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAM 665
           TAL                                G +EDA  L  +M    +TV WNA+
Sbjct: 143 TAL--------------------------------GRLEDARTLLHRMPAPSSTVAWNAV 170

Query: 666 LVGLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           + G AQ    E E   L++DM+  G+ P   TF  +LSA +      E  +  H    ++
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQ-VHAAAVRH 229

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           G++  V   S L++   + G   +A  L+     E +  M  A+L
Sbjct: 230 GLDANVFVGSSLINLYAKCGCIGDA-ILVFDCSGEKNVVMWNAML 273



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 22/233 (9%)

Query: 11  PRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL 70
           P HK+  V +++      +N  S+  SLL F +   +        + SIL+     + L 
Sbjct: 566 PDHKN-LVEWTAIVSGYAQNGYSYQ-SLLSFWRMRSYDVHPDEVTFASILKACSEMTALS 623

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSILAAY 129
            GK  H  I+ S     +  T+ ++ MYS+CG ++ +   F ++  + D+  WNS++  +
Sbjct: 624 DGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGF 683

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-------YVWASETVH 182
           A +G  +     E   LF+ +++S   +  +T   +L  C  +G       Y  +   V+
Sbjct: 684 AKNGYAD-----EALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVY 738

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           G   ++    D +     +++  + G ++EA+ + + +  R D V+W   L A
Sbjct: 739 GIMPRV----DHY--ACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAA 785


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 193/585 (32%), Positives = 315/585 (53%), Gaps = 64/585 (10%)

Query: 385 GLRTDQFTLASVLR---ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           G+  D  T + +++   A  ++ EG    K++H H   N     +F++  LI++Y +   
Sbjct: 280 GVWADSITYSELIKCCLAHGAVREG----KRVHRHIFSNGYHPKTFLTNILINMYVKFNL 335

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           + EA+ LF+     ++ +W  MI  Y  +  + +A+ L + M   G   +  T ++ ++A
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRA 395

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  LKQ   +H++ MK G E D+ V S ++D+Y K G +++A  +F ++   D V W
Sbjct: 396 CERLYDLKQ---LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVW 452

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            ++I+    + + D AL +Y  MR  G   D+ T   +++A + L+ LE GRQ H +++K
Sbjct: 453 NSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK 512

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
            D   D  +  +L+DMY KCG++EDA  +F +M  ++ + W+ M+ GLAQ+G   E L L
Sbjct: 513 FD--QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNL 570

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE MK  G +P+ +T +GVL ACS+ GLV+E +  F  M   YGI+P  EHY  ++D LG
Sbjct: 571 FESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLG 630

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RA +  +  +LI  M  E      R LL ACR + + +   + A++++ L+P D+ AYVL
Sbjct: 631 RAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVL 690

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LSNI+A + +W+DV   R  MK++ ++K+P                        D I  +
Sbjct: 691 LSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQ 750

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           +   I R+   GYVPDT+FVL D+E E++E +L YHSEKLA  +G++S P    I     
Sbjct: 751 LNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKN 810

Query: 894 ---------------------LSNKEPLYANRFHHLRDGMCPCAD 917
                                +  ++P+   R+HH +DG+C C D
Sbjct: 811 LKICGDCHKFAKLIAELEQRHIVIRDPI---RYHHFQDGVCSCGD 852



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 182/380 (47%), Gaps = 36/380 (9%)

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ +   M   G   D IT +  +K C     +++GK++H +   +G+     +++ +++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MYVK   + +AQ +F+ +P  + V+WTTMIS   +    D A+ +   M   GV+P+ FT
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ +++A   L  L   +Q+H+ ++K+   SD FV  +L+D+Y+K G + +A  +F++M 
Sbjct: 389 FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             ++V+WN+++   AQH +G+E L L++ M+  G   D  T   VL AC+   L+    +
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505

Query: 716 -NFHLMREKYGI---------------------------EPEVEHYSFLVDALGRAGRTK 747
            + H+++    +                           + +V  +S ++  L + G + 
Sbjct: 506 AHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSM 565

Query: 748 EAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWVAEKLMALEPFDSSA--YVLL 802
           EA  L  SM  +     H  +LG   AC   G    G +    +  L   D     Y  +
Sbjct: 566 EALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCM 625

Query: 803 SNIFAAANQWDDVTSARGEM 822
            ++   A + DD+     EM
Sbjct: 626 LDLLGRAEKLDDMVKLIHEM 645



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 221/499 (44%), Gaps = 66/499 (13%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R+LPS    L    ++  ++ S + S+   +++  ++   +  GK  H  I ++   P  
Sbjct: 264 RDLPSAMHVLDSMERRGVWADSITYSE---LIKCCLAHGAVREGKRVHRHIFSNGYHPKT 320

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FLTN L+ MY +   L  A+ LFDKMP+R+++SW ++++AY+     NA+      RL  
Sbjct: 321 FLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYS-----NAQLNDRAMRLLA 375

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            +       +  T + +L+ C     ++  + +H + +K+GL  D FV  AL+++YSK G
Sbjct: 376 FMFRDGVMPNMFTFSSVLRACER---LYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMG 432

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           ++ EA  +F  M   D V+W  ++ A+A++  G+E  HL+  + R G   D  ++  VL 
Sbjct: 433 ELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLR 492

Query: 269 VIS-----DLGKRHEEQVQAYAIKLLLYN----------------------NNSNVVLWN 301
             +     +LG++    V  +   L+L N                         +V+ W+
Sbjct: 493 ACTSLSLLELGRQAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWS 552

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG-------QQI 354
             ++G  Q G +  A+  F +M     + + +T L  L A +    +N G         +
Sbjct: 553 TMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNL 612

Query: 355 HGTTLKSGFYSAV--IVG-----NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           +G       Y  +  ++G     + ++ +  +M C   + T + TL    RA  ++    
Sbjct: 613 YGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWR-TLLDACRARQNVDLAT 671

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYC---RNGSMAEAEYLFENK-----DGFDLAT 459
           + +K+I    +K D   D+     L ++Y    R   +AE     + +      G     
Sbjct: 672 YAAKEI----LKLDP-QDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIE 726

Query: 460 WNAMIFGYILSNNSHKALE 478
            N  I  +IL + SH  ++
Sbjct: 727 VNKQIHAFILGDKSHPQID 745



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 180/473 (38%), Gaps = 99/473 (20%)

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            ++     +  S+     +   +T + L+K CL+ G V   + VH +    G     F++
Sbjct: 264 RDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLT 323

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+N+Y KF  + EA+ LFD M ER+VV W  M+ AY+     +    L   + R G+ 
Sbjct: 324 NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVM 383

Query: 258 PDDESVQCVL-------------------GVISDLGKRHEEQVQAY--------AIKLLL 290
           P+  +   VL                   G+ SD+  R    +  Y        A+K+  
Sbjct: 384 PNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVR-SALIDVYSKMGELLEALKVFR 442

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                + V+WN  ++ + Q  D   A+  + +M R     D  T    L A      L L
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           G+Q H   LK  F   +I+ N+L++MY    C CG   D                    +
Sbjct: 503 GRQAHVHVLK--FDQDLILNNALLDMY----CKCGSLED--------------------A 536

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K I     K D +                                   +W+ MI G   +
Sbjct: 537 KFIFNRMAKKDVI-----------------------------------SWSTMIAGLAQN 561

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM-HAYAMKSGFEL 525
             S +AL LF  M   G + + ITI   + AC    ++ +G    + M + Y +  G E 
Sbjct: 562 GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH 621

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
             C    +LD+  +   + D   + +++   PD V W T++  C      DLA
Sbjct: 622 YGC----MLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLA 670


>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 238/801 (29%), Positives = 364/801 (45%), Gaps = 174/801 (21%)

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G V   FVS  L+ +Y++      A+ +FD M  RD V W  ML AY+  G       LF
Sbjct: 47  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +      PD                                    +VV WN  +SGY 
Sbjct: 107 DGM------PD-----------------------------------PDVVSWNALVSGYC 125

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q G    +++ FV M R  V  D  TF V L + +  + L+LG Q+H   +K+G    V 
Sbjct: 126 QRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVR 185

Query: 369 VGNSLINMYSK--------------------------MGCV-----------------CG 385
            G++L++MY K                           GCV                  G
Sbjct: 186 TGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLG 245

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L   Q + AS  R+ +++   L+  +Q+H HAIKN   +D  V TA++DVY +  S+ +A
Sbjct: 246 LGVSQPSYASAFRSCAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 304

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
              F       + T NAM+ G            LF  M  S  R D ++++    AC   
Sbjct: 305 RRAFFGLPNHTVETSNAMMVG------------LF--MIRSSIRFDVVSLSGVFSACAET 350

Query: 506 LMLKQGKQMHAYAMKSGFEL---------------------------------------- 525
                G+Q+H  A+KS  +L                                        
Sbjct: 351 KGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDD 410

Query: 526 -----------DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
                      D  V+S ++DMY KCG + +AQ + + I     V+W  ++SG   N E 
Sbjct: 411 TILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 470

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           + A   + +M   G+ PD FTFA ++   + L  +E G+QIH  +IK +   D ++  +L
Sbjct: 471 EAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 530

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           VDMYAKCG++ D+ ++F++++ R+ V WNAM+ G A HG G E L++FE M+   V P+ 
Sbjct: 531 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 590

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
            TF+ VL ACS+ GL  +    FHLM   Y +EP++EH++ +VD LGR+   +EA + I 
Sbjct: 591 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 650

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
           SMPF+A A + + LL  C+++ D E  +  A  ++ L+P DSS Y+LLSN++A + +W D
Sbjct: 651 SMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 710

Query: 815 VTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGY 851
           V+  R  +K+  +KK+P                       +  ++  +  LI  +K  GY
Sbjct: 711 VSRTRRLLKQGRLKKEPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 770

Query: 852 VPDT-DFVLLDVEEEEKERAL 871
            PD+  FV +D E    E  L
Sbjct: 771 EPDSASFVEVDEEGSAPEHCL 791



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 271/609 (44%), Gaps = 64/609 (10%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++T YS  G +  A  LFD MPD D++SWN++++ Y   G        E   LF  + 
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG-----MFQESVDLFVEMA 141

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                  R T A LLK C +   +     VH  A+K GL  D     ALV++Y K   + 
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCV 266
           +A   F GM ER+ V W   +    +N        LF+++ R GL     S       C 
Sbjct: 202 DALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN---- 322
                + G+    Q+ A+AIK      +S+ V+    +  Y +      A   F      
Sbjct: 262 AMSCLNTGR----QLHAHAIK---NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNH 314

Query: 323 -------------MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                        MIRS++++D V+     +A A T     GQQ+H   +K         
Sbjct: 315 TVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK--------- 365

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA----- 424
             S++++Y K    C    + + +   ++   S+     ++  +  +   +DT+      
Sbjct: 366 --SVLDLYGK----CKALMEAYLIFQGMKQKDSVSWNAIIAA-LEQNGHYDDTILHFNEM 418

Query: 425 ---DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D+FV++ ++D+YC+ G + EA+ L +   G  + +WNA++ G+ L+  S  A + FS
Sbjct: 419 LRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFS 478

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M   G + D  T AT +  C  L  ++ GKQ+H   +K     D  +SS ++DMY KCG
Sbjct: 479 EMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCG 538

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            M D+  +F  +   D V+W  MI G   +G    AL ++ +M+   VVP+  TF  +++
Sbjct: 539 DMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLR 598

Query: 602 ASSCLTALEQG-RQIH--ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR- 657
           A S +   + G R  H      KL+   + F    +VD+  +    ++A      M  + 
Sbjct: 599 ACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA--CMVDILGRSKGPQEAVKFINSMPFQA 656

Query: 658 NTVLWNAML 666
           + V+W  +L
Sbjct: 657 DAVIWKTLL 665



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 166/702 (23%), Positives = 283/702 (40%), Gaps = 86/702 (12%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  S+  F++ +    S   + +  +L+   +  +L LG   HA  + +    D    + 
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY +C SL  A   F  MP+R+ +SW S +A    +     E    G  LF  ++  
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQN-----EQYVRGLELFIEMQRL 244

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               S+ + A   + C +   +     +H +A+K     D  V  A+V++Y+K   + +A
Sbjct: 245 GLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDA 304

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL---CPDD------ESVQ 264
           +  F G+    V     M+       F       F  +  SG+   C +       + V 
Sbjct: 305 RRAFFGLPNHTVETSNAMMVGL----FMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVH 360

Query: 265 CV-LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           C+ +  + DL  + +  ++AY I   +   +S  V WN  ++   Q G     I  F  M
Sbjct: 361 CLAIKSVLDLYGKCKALMEAYLIFQGMKQKDS--VSWNAIIAALEQNGHYDDTILHFNEM 418

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL-------INM 376
           +R +    S    +        +   L  +I G  + S  ++A++ G SL          
Sbjct: 419 LRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS--WNAILSGFSLNKESEAAQKF 476

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           +S+M    GL+ D FT A+VL   ++L   + L KQIH   IK + + D ++S+ L+D+Y
Sbjct: 477 FSEM-LDMGLKPDHFTFATVLDTCANLAT-IELGKQIHGQIIKQEMLDDEYISSTLVDMY 534

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + G M ++  +FE  +  D  +WNAMI GY L     +AL +F  M       +  T  
Sbjct: 535 AKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFV 594

Query: 497 TAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP- 554
             ++AC  + +   G +  H        E  L   + ++D+  +     +A    N +P 
Sbjct: 595 AVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPF 654

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V W T++S C    + ++A                                     
Sbjct: 655 QADAVIWKTLLSICKIRQDVEIA-----------------------------------EL 679

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIED---AYILFKQMDMRNT--VLW------- 662
             +N++ LD   D  V I L ++YA+ G   D      L KQ  ++      W       
Sbjct: 680 AASNVLLLD-PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEAQSEM 738

Query: 663 NAMLVGLAQHGNGEETLKLFED----MKAHGVEPDSVTFIGV 700
           +  LVG   H    E  ++  D    MK  G EPDS +F+ V
Sbjct: 739 HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 780



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 24/218 (11%)

Query: 22  SFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILN 81
           S  K++      FS  L   L+  HF+       + ++L    + + + LGK  H +I+ 
Sbjct: 465 SLNKESEAAQKFFSEMLDMGLKPDHFT-------FATVLDTCANLATIELGKQIHGQIIK 517

Query: 82  SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
              + D ++++ L+ MY++CG +  +  +F+K+  RD +SWN+++  YA  G G      
Sbjct: 518 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG-----V 572

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV------WASETVHGYALKIGLVWDEF 195
           E  R+F  +++     +  T   +L+ C   G        +   T H Y L+  L  + F
Sbjct: 573 EALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTH-YKLEPQL--EHF 629

Query: 196 VSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML 232
               +V+I  +    +EA KF+     + D V+WK +L
Sbjct: 630 --ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 665


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 240/858 (27%), Positives = 399/858 (46%), Gaps = 140/858 (16%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
           D+ +   ++ +YS  G   +++ +FD ++++++  W  ++ +Y+ N     V  +FV + 
Sbjct: 116 DDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMI 175

Query: 252 HRSGLCPDDESVQCVLGVISDLGK--------------RHEEQVQAYAIKLLLYNNNS-- 295
             SGL PD+ +  CV+   + + +              R  E V      +  Y  N   
Sbjct: 176 TESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSV 235

Query: 296 -------------NVVLWNKKLSGYLQVGDNHGAIECFV---NMIRSNVQY----DSVTF 335
                        N+V WN  +  +    DN  + ECF+    M+  + +     D  T 
Sbjct: 236 SDALRVFKIMPERNLVSWNSMIRVF---SDNGLSEECFLLLGQMMEKDDEIAFTPDVATL 292

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------ 383
              L   A    + +G+ +HG  +K      V+V N+L++MYSK GC+            
Sbjct: 293 ATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNN 352

Query: 384 ---------------------------------CGLRTDQFTL---ASVLRASSSLPEGL 407
                                              LR D+ T+     V    S LP   
Sbjct: 353 KNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN-- 410

Query: 408 HLSKQIHVHAIKNDTVADS-FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
              K++H +++K + V ++  V+ A +  Y + GS++ A  +F +     + +WNA+I G
Sbjct: 411 --LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGG 468

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y  S++   +L+ +  M +SG   D  T+ + + AC  +  LK GK++H   +++  E D
Sbjct: 469 YSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERD 528

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             V   +L +Y+ CG +  A  +F+ +     V+W TM++G + NG  + ALS++ QM L
Sbjct: 529 SFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVL 588

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
            GV P E +   +  A S L +L  GR+ H   +K     + F+  S++DMYAK G++ +
Sbjct: 589 YGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVME 648

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           ++ +F  +  R+   WNAM++G   HG  +E +KLFE+M+  G  PD +TF+GVL+AC++
Sbjct: 649 SFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNH 708

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL-SMPFEASASMH 765
           +GLV E       M+  +G+ P ++HY+ ++D L RAG+  EA ++    M  E    + 
Sbjct: 709 SGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIW 768

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
             LL +CR+  + E G+ +A KL   EP     YVLLSN++A + +WD+V   R  MK  
Sbjct: 769 NFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEM 828

Query: 826 NVKKDPA-------DLIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDV 862
           +++KD           +F+ V G                L + I + GY PDT  V  D+
Sbjct: 829 SLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDL 888

Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA--------- 902
            EEEK   L  HSEKLA  YGLI T   + +             N   L +         
Sbjct: 889 SEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVV 948

Query: 903 ---NRFHHLRDGMCPCAD 917
               RFHH ++G C C D
Sbjct: 949 RDNKRFHHFKNGFCSCGD 966


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 207/615 (33%), Positives = 311/615 (50%), Gaps = 87/615 (14%)

Query: 387 RTDQFTLA---SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           RTD    A   S L A+      L L +++H H   ++ V   F+S  L+D+Y + GS+ 
Sbjct: 80  RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLV 139

Query: 444 EAEYLFENKDGFDLATWNAMIFGY-------------------------------ILSNN 472
           +A+ LF+     DL +WN MI GY                               +  N 
Sbjct: 140 DAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQ 199

Query: 473 SHKALELFS----HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
             +ALELF     H  +S  +    +   A  A  CL +   GK++H Y +++   LD  
Sbjct: 200 PREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL---GKEIHGYLIRTELNLDEV 256

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V S +LD+Y KCG++ +A+ IF+ +   D V+WTTMI  C ++G  +    ++  +  SG
Sbjct: 257 VWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSG 316

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V P+E+TFA ++ A +   A   G+++H  ++        F   +LV MY+KCGN   A 
Sbjct: 317 VRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVAR 376

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F +M   + V W +++VG AQ+G  +E L  FE +   G +PD VT++GVLSAC++ G
Sbjct: 377 RVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAG 436

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV +  E FH ++EK+G+    +HY+ ++D L R+GR KEA  +I +MP +    +  +L
Sbjct: 437 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASL 496

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LG CR+ G+ E  K  A+ L  +EP + + Y+ L+NI+A A  W +V + R +M    + 
Sbjct: 497 LGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIV 556

Query: 829 KDPA----------------DLIFAKVEG-------LIKRIKEGGYVPDTDFVLLDVEEE 865
           K P                 D    K          L K+IKE GYVPDT+FVL DVEEE
Sbjct: 557 KKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEE 616

Query: 866 EKERALYYHSEKLARAYGLISTPP-----------------------SSVILSNKEPLYA 902
           +KE+ L YHSEKLA  +G+ISTPP                       S ++        +
Sbjct: 617 QKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDS 676

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH   DG C C D
Sbjct: 677 NRFHCFEDGSCSCKD 691



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 177/387 (45%), Gaps = 64/387 (16%)

Query: 46  HFSSSSSSSQWFSILRHA-ISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           H +    S++ +S L  A +    L LG+  HA    S+ +P  F++N L+ MY++CGSL
Sbjct: 79  HRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSL 138

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAH--------------------------SGEGNAE 138
           V A+ LFD+M  RDL SWN+++  YA                           SG     
Sbjct: 139 VDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHN 198

Query: 139 NVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
              E   LFR + R   + +++ TL+  L    +   +   + +HGY ++  L  DE V 
Sbjct: 199 QPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVW 258

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++Y K G + EA+ +FD M++RDVV W  M+    E+G  EE F LF DL +SG+ 
Sbjct: 259 SALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVR 318

Query: 258 PDDESVQCVLGVISDLGKRH-EEQVQAY-----------AIKLLLY-------------- 291
           P++ +   VL   +D    H  ++V  Y           AI  L++              
Sbjct: 319 PNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRV 378

Query: 292 ---NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
               +  ++V W   + GY Q G    A+  F  +++S  + D VT++  L+A      +
Sbjct: 379 FNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLV 438

Query: 349 NLG-------QQIHGTTLKSGFYSAVI 368
           + G       ++ HG    +  Y+ VI
Sbjct: 439 DKGLEYFHSIKEKHGLMHTADHYACVI 465



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 153/320 (47%), Gaps = 48/320 (15%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A+EL   +H +  R      +T + AC     L+ G+++HA+   S F   + +S+ +L
Sbjct: 73  EAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLL 129

Query: 535 DMYVKCGAMVDAQ-------------------------------SIFNDIPAPDDVAWTT 563
           DMY KCG++VDAQ                                +F+++P  D+ +W  
Sbjct: 130 DMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNA 189

Query: 564 MISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            ISG V + +   AL ++  M R      ++FT +  + AS+ +  L  G++IH  LI+ 
Sbjct: 190 AISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT 249

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
           + + D  V  +L+D+Y KCG++++A  +F QM  R+ V W  M+    + G  EE   LF
Sbjct: 250 ELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLF 309

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY------GIEPEVEHYSFL 736
            D+   GV P+  TF GVL+AC+       A E  HL +E +      G +P     S L
Sbjct: 310 RDLMQSGVRPNEYTFAGVLNACA-----DHAAE--HLGKEVHGYMMHAGYDPGSFAISAL 362

Query: 737 VDALGRAGRTKEAGELILSM 756
           V    + G T+ A  +   M
Sbjct: 363 VHMYSKCGNTRVARRVFNEM 382



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 121/245 (49%), Gaps = 6/245 (2%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           N P  +L L   +Q+ H  SSS+     S L  + +   L LGK  H  ++ +    D  
Sbjct: 198 NQPREALELFRVMQR-HERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEV 256

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ +Y +CGSL  AR +FD+M DRD++SW +++      G        EGF LFR 
Sbjct: 257 VWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRRE-----EGFLLFRD 311

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L +S    +  T A +L  C         + VHGY +  G     F   ALV++YSK G 
Sbjct: 312 LMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGN 371

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
            R A+ +F+ M + D+V W  ++  YA+NG  +E  H F  L +SG  PD  +   VL  
Sbjct: 372 TRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSA 431

Query: 270 ISDLG 274
            +  G
Sbjct: 432 CTHAG 436



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 196/483 (40%), Gaps = 95/483 (19%)

Query: 148 RSLRESITFTSRLTLAP-------LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           + ++E++    R    P       L+  C+    +     VH +      V   F+S  L
Sbjct: 69  KRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           +++Y+K G + +A+ LFD M  RD+  W  M+  YA+ G  E+   LF           D
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLF-----------D 177

Query: 261 ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
           E  Q                           +N S    WN  +SGY+       A+E F
Sbjct: 178 EMPQ--------------------------RDNFS----WNAAISGYVTHNQPREALELF 207

Query: 321 VNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
             M R      +  T   ALAA A    L LG++IHG  +++      +V ++L+++Y K
Sbjct: 208 RVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGK 267

Query: 380 MGCV-------------------------------------------CGLRTDQFTLASV 396
            G +                                            G+R +++T A V
Sbjct: 268 CGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGV 327

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L A +      HL K++H + +       SF  +AL+ +Y + G+   A  +F      D
Sbjct: 328 LNACAD-HAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPD 386

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMH 515
           L +W ++I GY  +    +AL  F  +  SG + D++T    + AC    ++ +G +  H
Sbjct: 387 LVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFH 446

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEE 574
           +   K G        + ++D+  + G   +A++I +++P  PD   W +++ GC  +G  
Sbjct: 447 SIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNL 506

Query: 575 DLA 577
           +LA
Sbjct: 507 ELA 509



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 7/164 (4%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H  ++++   P  F  + L+ MYS+CG+   ARR+F++M   DL+SW S++  YA
Sbjct: 339 LGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYA 398

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS-ETVHGYALKIG 189
            +G+ +     E    F  L +S T   ++T   +L  C  +G V    E  H    K G
Sbjct: 399 QNGQPD-----EALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHG 453

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVML 232
           L+        ++++ ++ G+ +EA+ + D M  + D  LW  +L
Sbjct: 454 LMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLL 497


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 222/748 (29%), Positives = 362/748 (48%), Gaps = 131/748 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV WN  ++ Y Q G +  A+  +  M    +  D VTF+  L A +   +L  G++IH
Sbjct: 74  NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIH 130

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
                SG  S   + N+L+ MY++ G V                                
Sbjct: 131 NRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWS 190

Query: 384 ----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                     C ++ +  T  +V+   S+ PE L   ++IH   + N    D  V+TALI
Sbjct: 191 GALRIFKEMKCDVKPNSTTYINVISGFST-PEVLPEGRKIHAEIVANGFDTDLVVATALI 249

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           ++Y + GS  EA  +F+     D+ +WN MI  Y+L+ + H+ALEL+  +   G +  + 
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKA 309

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T  + + AC  +  L QG+ +H++ ++ G + ++ V++ +++MY KCG++ +A+ +FN +
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369

Query: 554 PAPDDVAWTT----------------------------------MISGCVDNGEEDLALS 579
              D VAW+T                                  MI+  V NG    A+ 
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMK 429

Query: 580 IYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
           I+ +M   +G+ PD  TF  +++A + L  L + + +HA + + +  S+  V  +L++MY
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           A+CG++E+A  LF     +  V W AM+   +Q+G   E L LF++M   GV+PD VT+ 
Sbjct: 490 ARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYT 549

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            +L  C++ G + + +  F  M E + + P  +H++ +VD LGR+GR  +A EL+ SMPF
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E         L ACR+ G  E G+  AE++  L+P  ++ Y+ +SNI+AA   W+ V S 
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASV 669

Query: 819 RGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------------------GYVPD 854
           R +M+ + +KK P  L F +V+G +     G                        GYVPD
Sbjct: 670 RKKMEERGLKKLPG-LSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPD 728

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLIST----PPSSVI----------------- 893
           T  VL DV E EKE  L YHSEK+A A+GL+S+     P  V+                 
Sbjct: 729 TKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIA 788

Query: 894 -LSNKEPLY--ANRFHHL-RDGMCPCAD 917
            ++ ++ +    NRFH    DG C C D
Sbjct: 789 RIAGRDIIVRDCNRFHRFSSDGKCSCGD 816



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 169/660 (25%), Positives = 301/660 (45%), Gaps = 78/660 (11%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L    S  D++ G++ H RI  S    D  + N L++MY +C SLV AR +F+ M 
Sbjct: 10  FLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMD 69

Query: 116 --DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
              R+++SWN+++AAYA +G       TE   L+  +      T  +T   +L  C S  
Sbjct: 70  WRQRNVVSWNAMIAAYAQNGHS-----TEALVLYWRMNLQGLGTDHVTFVSVLGACSS-- 122

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +H      GL   + ++ ALV +Y++FG + +AK +F  +Q RD   W  ++ 
Sbjct: 123 -LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG------VISDLGKRHEEQV-QAYAI 286
           A++++G       +F ++ +  + P+  +   V+       V+ +  K H E V   +  
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240

Query: 287 KLLLYN----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            L++                           ++V WN  +  Y+  GD H A+E +  + 
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
               +    TF+  L A +    L  G+ +H   L+ G  S V V  +L+NMY+K G   
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG--- 357

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG---S 441
                            SL E   +      +A+KN    D+   + LI  Y  NG    
Sbjct: 358 -----------------SLEEARKV-----FNAMKNR---DAVAWSTLIGAYASNGYGKD 392

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH-TSGERLDEITIATAVK 500
             +A  +F+     D  +WNAMI  Y+ +  +  A+++F  M   +G + D +T    ++
Sbjct: 393 ARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLE 452

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L  L + K +HA   +S  E ++ V++ +++MY +CG++ +A+ +F        V+
Sbjct: 453 ACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVS 512

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           WT M++     G    AL ++ +M L GV PD+ T+  ++   +   +LEQG +   ++ 
Sbjct: 513 WTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMA 572

Query: 621 KLDC---SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +L     ++D F   ++VD+  + G + DA  L + M    + V W   L     HG  E
Sbjct: 573 ELHALAPTADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 244/540 (45%), Gaps = 53/540 (9%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           + S L  G+  H R+  S     + L N L+TMY+R GS+  A+R+F  +  RD  SWN+
Sbjct: 119 ACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ A++ SG+ +        R+F+ ++  +   S  T   ++    +   +     +H  
Sbjct: 179 VILAHSQSGDWSG-----ALRIFKEMKCDVKPNS-TTYINVISGFSTPEVLPEGRKIHAE 232

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +  G   D  V+ AL+N+Y K G   EA+ +FD M++RD+V W VM+  Y  NG   E 
Sbjct: 233 IVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEA 292

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN------NSNVV 298
             L+  L   G      +   +LG  S         V+A A   L++++      +S V 
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACS--------SVKALAQGRLVHSHILERGLDSEVA 344

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           +    ++ Y + G    A + F N +++    D+V +   + A A        ++     
Sbjct: 345 VATALVNMYAKCGSLEEARKVF-NAMKNR---DAVAWSTLIGAYASNGYGKDARKARKVF 400

Query: 359 LKSGFYSAVIVGNSLINMYSKMGC-------------VCGLRTDQFTLASVLRASSSLPE 405
            + G     I  N++I  Y + GC               GL+ D  T  +VL A +SL  
Sbjct: 401 DRLGSRD-TISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGR 459

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   K +H    +++  ++  V+  LI++Y R GS+ EAE LF       + +W AM+ 
Sbjct: 460 -LSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVA 518

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-------KQMHAYA 518
            +       +AL+LF  M   G + D++T  + +  C     L+QG        ++HA A
Sbjct: 519 AFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALA 578

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             +         + ++D+  + G + DA+ +   +P  PD VAW T ++ C  +G+ +L 
Sbjct: 579 PTADH------FAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELG 632



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 140/268 (52%), Gaps = 7/268 (2%)

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D +T  T + +C     + +G+ +H     S FE D  V + ++ MY KC ++VDA+S+F
Sbjct: 6   DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 551 N--DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
              D    + V+W  MI+    NG    AL +Y +M L G+  D  TF  ++ A S   +
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---S 122

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L QGR+IH  +      S   +  +LV MYA+ G++ DA  +F+ +  R+   WNA+++ 
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            +Q G+    L++F++MK   V+P+S T+I V+S  S   ++ E     H      G + 
Sbjct: 183 HSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEG-RKIHAEIVANGFDT 240

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSM 756
           ++   + L++  G+ G + EA E+   M
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKM 268



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 591 PDEFTF-AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
           PD  TF  +L   SSC   +E GR +H  +       D  VG +L+ MY KC ++ DA  
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVE-GRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 650 LFKQMD--MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +F+ MD   RN V WNAM+   AQ+G+  E L L+  M   G+  D VTF+ VL ACS
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L    S   L   K+ HA+I  S    +  +TN L+ MY+RCGSL  A RLF    
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK 506

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----L 170
           ++ ++SW +++AA++  G        E   LF+ +         +T   +L +C     L
Sbjct: 507 EKTVVSWTAMVAAFSQYG-----RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSL 561

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
             G+ + ++    +AL      D F   A+V++  + G++ +AK L + M  E D V W 
Sbjct: 562 EQGWRYFTDMAELHAL--APTADHF--AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWM 617

Query: 230 VMLRAYAENG---FGEEVFHLFVDLHRSGLCP 258
             L A   +G    GE       +L  S   P
Sbjct: 618 TFLTACRIHGKLELGEAAAERVYELDPSSTAP 649


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 231/719 (32%), Positives = 359/719 (49%), Gaps = 99/719 (13%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD--SVTFLVALAAVAGTDNLNL 350
           NN      +  LS   Q  +     +    M+R+ + +D  S + L+  AA++   +L+ 
Sbjct: 28  NNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDY 87

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSK-----MGCVCGLR--------TDQFTLASVL 397
            QQ+         Y+     N+LI  Y+         +  LR         D+FT   ++
Sbjct: 88  AQQVFDQIPHPNLYT----WNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           +A+S L E L   K  H   IK    +D F+  +LI  Y + G +     +F N    D+
Sbjct: 144 KAASELEE-LFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDV 202

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN+MI  ++      +ALELF  M T   + + IT+   + AC      + G+ +H+Y
Sbjct: 203 VSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSY 262

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
             ++     L +S+ +LDMY KCG++ DA+ +F+ +P  D V+WTTM+ G    GE D A
Sbjct: 263 IERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAA 322

Query: 578 -------------------------------LSIYHQMRLSGVV-PDEFTFAILVKASSC 605
                                          L ++H+++LS    PDE T    + A + 
Sbjct: 323 QGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQ 382

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L A++ G  IH  + K     +  +  SL+DMY KCG+++ A ++F  ++ ++  +W+AM
Sbjct: 383 LGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAM 442

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + GLA HG+G++ + LF  M+   V+P++VTF  +L ACS+ GLV E    F+ M   YG
Sbjct: 443 IAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYG 502

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           + P V+HY+ +VD LGRAG  +EA ELI  MP   +AS+  ALLGAC +  +    +   
Sbjct: 503 VLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQAC 562

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
            +L+ LEP +  AYVLLSNI+A A +WD V+  R  M+   +KK+P              
Sbjct: 563 SQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEF 622

Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE-KERALYYHSEKLARA 881
                    A  I+AK++ ++ R++  GYVP+   +L  VEEE+ KE+AL+ HSEKLA A
Sbjct: 623 LVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIA 682

Query: 882 YGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           +GLIST  S  I                     L ++E L  +  RFHH R+G C C D
Sbjct: 683 FGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMD 741



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 231/512 (45%), Gaps = 30/512 (5%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA++L +    D F  + L+T    S   SL YA+++FD++P  +L +WN+++ AYA
Sbjct: 52  KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111

Query: 131 HSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            S      N  +   +F R L +S  F  + T   L+K       ++  +  HG  +K+ 
Sbjct: 112 SSS-----NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL 166

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D F+  +L++ Y+K G++     +F  +  RDVV W  M+ A+ + G  EE   LF 
Sbjct: 167 LGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQ 226

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLWNKKLSGYL 308
           ++    + P+  +   ++GV+S   K+ + +   +    +  N    ++ L N  L  Y 
Sbjct: 227 EMETQNVKPNGIT---MVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYT 283

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALA------AVAGTDNLNLGQQIHGTTLKSG 362
           + G    A   F  M   ++     T LV  A      A  G  +    Q I        
Sbjct: 284 KCGSVEDAKRLFDKMPEKDI-VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALIS 342

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
            Y         + ++ ++      + D+ TL S L A + L   + L   IHV+  K   
Sbjct: 343 AYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQL-GAMDLGGWIHVYIKKQGM 401

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             +  ++T+LID+YC+ G + +A  +F + +  D+  W+AMI G  +  +   A+ LFS 
Sbjct: 402 KLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSK 461

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGK----QMH-AYAMKSGFELDLCVSSGILDMY 537
           M     + + +T    + AC  + ++++G+    QM   Y +  G +   C    ++D+ 
Sbjct: 462 MQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYAC----MVDIL 517

Query: 538 VKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            + G + +A  +   +P AP    W  ++  C
Sbjct: 518 GRAGLLEEAVELIEKMPMAPAASVWGALLGAC 549



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 27/243 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L      SD   G+  H+ I  +       L+N ++ MY++CGS+  A+RLFDKMP++D
Sbjct: 243 VLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKD 302

Query: 119 LISWNSILAAYAHSGEGNAEN--------------------------VTEGFRLFRSLRE 152
           ++SW ++L  YA  GE +A                              E   LF  L+ 
Sbjct: 303 IVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQL 362

Query: 153 SITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           S T     +TL   L  C   G +     +H Y  K G+  +  ++ +L+++Y K G ++
Sbjct: 363 SKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQ 422

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           +A  +F  ++ +DV +W  M+   A +G G++   LF  +    + P+  +   +L   S
Sbjct: 423 KALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACS 482

Query: 272 DLG 274
            +G
Sbjct: 483 HVG 485



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG   H  I       +  LT +L+ MY +CG L  A  +F  +  +D+  W++++A  A
Sbjct: 388 LGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLA 447

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET-VHGYALKIG 189
             G G      +   LF  ++E     + +T   +L  C   G V    T  +   L  G
Sbjct: 448 MHGHGK-----DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYG 502

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV-LWKVMLRA 234
           ++        +V+I  + G + EA  L + M       +W  +L A
Sbjct: 503 VLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 548


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 220/704 (31%), Positives = 338/704 (48%), Gaps = 134/704 (19%)

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
           NL LG Q+H   + +G      +G+ L+ +Y + GCV                       
Sbjct: 25  NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 84

Query: 384 --CGL------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
             CGL                  R D F    V +A S L +   + K ++ + +     
Sbjct: 85  MYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL-KNYRVGKDVYDYMLSIGFE 143

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            +S V  +++D++ + G M  A   FE  +  D+  WN M+ GY       KAL +F  M
Sbjct: 144 GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKM 203

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCGA 542
              G + + ITIA+AV AC  L +L+ G+++H Y +K    + DL V + ++D Y KC +
Sbjct: 204 VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 263

Query: 543 -------------------------------------------MVDAQSIFNDIPAPDDV 559
                                                      M  A S+F+++   D V
Sbjct: 264 VEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVV 323

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            W ++IS C  +G    AL +  +M LS V  +  T    + A S L AL QG++IH  +
Sbjct: 324 VWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 383

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+    +  F+  SL+DMY +CG+I+ +  +F  M  R+ V WN M+     HG G + +
Sbjct: 384 IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 443

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF+  +  G++P+ +TF  +LSACS++GL+ E ++ F +M+ +Y ++P VE Y+ +VD 
Sbjct: 444 NLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDL 503

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           L RAG+  E  E I  MPFE +A++  +LLGACR+  + +  ++ A  L  LEP  S  Y
Sbjct: 504 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNY 563

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           VL++NI++AA +W+D    R  MK + V K P                        + I 
Sbjct: 564 VLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQIS 623

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST---PPSSVI 893
           AK+E L   IKE GYVPDT+FVL DV+E+EKE +L  HSEK+A A+GLIST    P  +I
Sbjct: 624 AKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRII 683

Query: 894 ------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                             +  ++ +  +  RFHH  DG+C C D
Sbjct: 684 KNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGD 727



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 172/338 (50%), Gaps = 13/338 (3%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS+L+    L   L L  Q+H   + N      F+ + L++VYC+ G + +A  +F+   
Sbjct: 14  ASILQKCRKL-YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             ++ +W A++  Y    +  + ++LF  M   G R D        KAC  L   + GK 
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           ++ Y +  GFE + CV   ILDM++KCG M  A+  F +I   D   W  M+SG    GE
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL-DCSSDPFVGI 632
              AL+++ +M L GV P+  T A  V A + L+ L  GR+IH   IK+ +  SD  VG 
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML--VGLAQHGNGEETLKLFEDMK---- 686
           SLVD YAKC ++E A   F  +   + V WNAML   G  Q+G+G+  L+ F+ M     
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 687 --AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
             +     D V +  ++SAC+ +G    A +   L+RE
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALD---LLRE 347



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 246/544 (45%), Gaps = 37/544 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+      +L LG   HA+++ +      FL + L+ +Y + G +  ARR+FDKM +R
Sbjct: 15  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ SW +I+  Y   G G+ E   E  +LF  +              + K C        
Sbjct: 75  NVFSWTAIMEMYC--GLGDYE---ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 129

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + V+ Y L IG   +  V G++++++ K G++  A+  F+ ++ +DV +W +M+  Y  
Sbjct: 130 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 189

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSN 296
            G  ++  ++F  +   G+ P+  ++   +   ++L   RH  ++  Y IK+     +S+
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV--EELDSD 247

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA------GTDNLNL 350
           +++ N  +  Y +      A   F  MI+   Q D V++   LA         G   L  
Sbjct: 248 LLVGNSLVDYYAKCRSVEVARRKF-GMIK---QTDLVSWNAMLAVTGFTQYGDGKAALEF 303

Query: 351 GQQIH--GTTLKSGFYSAVIVGNSLINMYSKMG------------CVCGLRTDQFTLASV 396
            Q++H   +         V+V NS+I+  ++ G             +  +  +  T+ S 
Sbjct: 304 FQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSA 363

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L A S L   L   K+IH   I+      +F+  +LID+Y R GS+ ++  +F+     D
Sbjct: 364 LPACSKLA-ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD 422

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           L +WN MI  Y +      A+ LF    T G + + IT    + AC    ++++G + + 
Sbjct: 423 LVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK-YF 481

Query: 517 YAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGE 573
             MK+ + +D  V   + ++D+  + G   +       +P  P+   W +++  C  +  
Sbjct: 482 KMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCN 541

Query: 574 EDLA 577
            DLA
Sbjct: 542 PDLA 545



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 591 PDEFT--FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           PDE    +A +++    L  L  G Q+HA L+        F+G  L+++Y + G +EDA 
Sbjct: 6   PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            +F +M  RN   W A++      G+ EET+KLF  M   GV PD   F  V  ACS
Sbjct: 66  RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS 122


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 243/763 (31%), Positives = 385/763 (50%), Gaps = 121/763 (15%)

Query: 206 KFGKIREAKFL-FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           + GK+  A+ + FD   E D VL+  ++  Y+++G                   D    +
Sbjct: 79  RLGKLVHARLIEFD--IEPDSVLYNSLISLYSKSG-------------------DSAKAE 117

Query: 265 CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            V   +   GKR                   +VV W+  ++ Y   G    AI+ FV  +
Sbjct: 118 DVFETMRRFGKR-------------------DVVSWSAMMACYGNNGRELDAIKVFVEFL 158

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSK---- 379
              +  +   +   + A + +D + +G+   G  +K+G F S V VG SLI+M+ K    
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218

Query: 380 ----------------------------MG------------CVCGLRTDQFTLASVLRA 399
                                       MG             + G  +D+FTL+SV  A
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFD 456
            + L E L L KQ+H  AI++  V D  V  +L+D+Y +   +GS+ +   +F+  +   
Sbjct: 279 CAEL-ENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335

Query: 457 LATWNAMIFGYILSNN-SHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQM 514
           + +W A+I GY+ + N + +A+ LFS M T G    +  T ++A KACG L   + GKQ+
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
              A K G   +  V++ ++ M+VK   M DAQ  F  +   + V++ T + G   N   
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           + A  +  ++    +    FTFA L+   + + ++ +G QIH+ ++KL  S +  V  +L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           + MY+KCG+I+ A  +F  M+ RN + W +M+ G A+HG     L+ F  M   GV+P+ 
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           VT++ +LSACS+ GLVSE + +F+ M E + I+P++EHY+ +VD L RAG   +A E I 
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
           +MPF+A   + R  LGACRV  +TE GK  A K++ L+P + +AY+ LSNI+A A +W++
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695

Query: 815 VTSARGEMKRKNVKKD-----------------------PADLIFAKVEGLIKRIKEGGY 851
            T  R +MK +N+ K+                        A  I+ +++ LI  IK  GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755

Query: 852 VPDTDFVLLDV----EEEEKERALYYHSEKLARAYGLISTPPS 890
           VPDTD VL  +    +E EKER LY HSEK+A A+GLIST  S
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKS 798



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 154/658 (23%), Positives = 287/658 (43%), Gaps = 90/658 (13%)

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           R+ I     +T + LLK C+ +      + VH   ++  +  D  +  +L+++YSK G  
Sbjct: 54  RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113

Query: 211 REAKFLFDGMQ---ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD------- 260
            +A+ +F+ M+   +RDVV W  M+  Y  NG   +   +FV+    GL P+D       
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173

Query: 261 -------------------------ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
                                    ES  CV   + D+  + E   +  A K+    +  
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN-AYKVFDKMSEL 232

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   ++  +Q+G    AI  F++M+ S  + D  T     +A A  +NL+LG+Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292

Query: 356 GTTLKSGF--------------------------------------YSAVIVG------- 370
              ++SG                                       ++A+I G       
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352

Query: 371 -NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
               IN++S+M     +  + FT +S  +A  +L +   + KQ+   A K    ++S V+
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP-RVGKQVLGQAFKRGLASNSSVA 411

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            ++I ++ ++  M +A+  FE+    +L ++N  + G   + N  +A +L S +      
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +   T A+ +     +  +++G+Q+H+  +K G   +  V + ++ MY KCG++  A  +
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           FN +   + ++WT+MI+G   +G     L  ++QM   GV P+E T+  ++ A S +  +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591

Query: 610 EQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAML 666
            +G + H N +  D    P +     +VD+  + G + DA+     M  +  VL W   L
Sbjct: 592 SEGWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650

Query: 667 VGLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
                H N E   L   + ++    EP +   +  + AC+  G   E+ E    M+E+
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRRKMKER 706



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 164/739 (22%), Positives = 297/739 (40%), Gaps = 148/739 (20%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP-- 115
           S+L+  I   D  LGK  HAR++     PD  L N+L+++YS+ G    A  +F+ M   
Sbjct: 67  SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126

Query: 116 -DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             RD++SW++++A Y ++G        +  ++F    E     +      +++ C +S +
Sbjct: 127 GKRDVVSWSAMMACYGNNGRE-----LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181

Query: 175 VWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKF-LFDGMQERDVVLWKVML 232
           V       G+ +K G    D  V  +L++++ K     E  + +FD M E +VV W +M+
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLY 291
               + GF  E    F+D+  SG   D  ++  V    ++L      +Q+ ++AI+  L 
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301

Query: 292 NN-----------------------------NSNVVLWNKKLSGYLQVGD-NHGAIECFV 321
           ++                             + +V+ W   ++GY++  +    AI  F 
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361

Query: 322 NMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            MI + +V+ +  TF  A  A     +  +G+Q+ G   K G  S   V NS+I+M+ K 
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421

Query: 381 --------------------------GCVCGLRTDQ-----------------FTLASVL 397
                                     G    L  +Q                 FT AS+L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
              +++   +   +QIH   +K     +  V  ALI +Y + GS+  A  +F   +  ++
Sbjct: 482 SGVANV-GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----K 512
            +W +MI G+     + + LE F+ M   G + +E+T    + AC  + ++ +G      
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDN 571
               + +K   E   C    ++D+  + G + DA    N +P   DV  W T +  C  +
Sbjct: 601 MYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              +L                                   G+     +++LD  ++P   
Sbjct: 657 SNTEL-----------------------------------GKLAARKILELD-PNEPAAY 680

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-----W-------NAMLVGLAQHGNG---- 675
           I L ++YA  G  E++  + ++M  RN V      W       +   VG   H N     
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740

Query: 676 EETLKLFEDMKAHGVEPDS 694
           +E  +L  ++K  G  PD+
Sbjct: 741 DELDRLITEIKRCGYVPDT 759



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 19/402 (4%)

Query: 385 GLRT-DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           G+R  D  T +S+L+ S        L K +H   I+ D   DS +  +LI +Y ++G  A
Sbjct: 56  GIRPMDSVTFSSLLK-SCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114

Query: 444 EAEYLFENKDGF---DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           +AE +FE    F   D+ +W+AM+  Y  +     A+++F      G   ++      ++
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174

Query: 501 ACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKC-GAMVDAQSIFNDIPAPDD 558
           AC     +  G+    + MK+G FE D+CV   ++DM+VK   +  +A  +F+ +   + 
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V WT MI+ C+  G    A+  +  M LSG   D+FT + +  A + L  L  G+Q+H+ 
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294

Query: 619 LIKLDCSSDPFVGISLVDMYAKC---GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN- 674
            I+     D  V  SLVDMYAKC   G+++D   +F +M+  + + W A++ G  ++ N 
Sbjct: 295 AIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352

Query: 675 GEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE--KYGIEPEVE 731
             E + LF +M   G VEP+  TF     AC   G +S+      ++ +  K G+     
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
             + ++    ++ R ++A     S+  +   S +  L G CR
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 463 MIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           +I  ++ + +   A+     M   G R +D +T ++ +K+C      + GK +HA  ++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP---APDDVAWTTMISGCVDNGEEDLAL 578
             E D  + + ++ +Y K G    A+ +F  +      D V+W+ M++   +NG E  A+
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDM 637
            ++ +    G+VP+++ +  +++A S    +  GR     L+K     SD  VG SL+DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 638 YAKCGN-IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           + K  N  E+AY +F +M   N V W  M+    Q G   E ++ F DM   G E D  T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 697 FIGVLSACS 705
              V SAC+
Sbjct: 272 LSSVFSACA 280



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 114/233 (48%), Gaps = 12/233 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           ++ +HF+ SS+        +   + SD  +GK    +        +  + N++++M+ + 
Sbjct: 369 VEPNHFTFSSA-------FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
             +  A+R F+ + +++L+S+N+ L      G     N  + F+L   + E     S  T
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFL-----DGTCRNLNFEQAFKLLSEITERELGVSAFT 476

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A LL    + G +   E +H   +K+GL  ++ V  AL+++YSK G I  A  +F+ M+
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            R+V+ W  M+  +A++GF   V   F  +   G+ P++ +   +L   S +G
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 113/502 (22%), Positives = 204/502 (40%), Gaps = 62/502 (12%)

Query: 307 YLQVGDNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           +L  GD  GA+     M R  ++  DSVTF   L +     +  LG+ +H   ++     
Sbjct: 36  HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP 95

Query: 366 AVIVGNSLINMYSKMGCVCGLR-----TDQFTLASVLRASSSLP----EGLHLSK-QIHV 415
             ++ NSLI++YSK G             +F    V+  S+ +      G  L   ++ V
Sbjct: 96  DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155

Query: 416 HAIKNDTVADSFVSTALIDVYCRNG---SMAEAEYLFENKDGF---DLATWNAMIFGYIL 469
             ++   V + +  TA+I   C N     +      F  K G    D+    ++I  ++ 
Sbjct: 156 EFLELGLVPNDYCYTAVIRA-CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 470 SNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-- 526
             NS   A ++F  M      L+ +T    +  C  +   ++  +     + SGFE D  
Sbjct: 215 GENSFENAYKVFDKM----SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 527 -----------------------LCVSSG--------ILDMYVKC---GAMVDAQSIFND 552
                                    + SG        ++DMY KC   G++ D + +F+ 
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDR 330

Query: 553 IPAPDDVAWTTMISGCVDNGE-EDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALE 610
           +     ++WT +I+G + N      A++++ +M   G V P+ FTF+   KA   L+   
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G+Q+     K   +S+  V  S++ M+ K   +EDA   F+ +  +N V +N  L G  
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           ++ N E+  KL  ++    +   + TF  +LS  +  G + +  E  H    K G+    
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQ 509

Query: 731 EHYSFLVDALGRAGRTKEAGEL 752
              + L+    + G    A  +
Sbjct: 510 PVCNALISMYSKCGSIDTASRV 531



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 12/247 (4%)

Query: 577 ALSIYHQMRLSGVVP-DEFTFAILVKASSCLTA--LEQGRQIHANLIKLDCSSDPFVGIS 633
           A+S    M   G+ P D  TF+ L+K  SC+ A     G+ +HA LI+ D   D  +  S
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLK--SCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102

Query: 634 LVDMYAKCGN---IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           L+ +Y+K G+    ED +   ++   R+ V W+AM+     +G   + +K+F +    G+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            P+   +  V+ ACS +  V         + +    E +V     L+D   +   + E  
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 751 ELILSMPFEASASMHRALLGACRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
             +     E +      ++  C   G   E  ++  +  M L  F+S  +  LS++F+A 
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD--MVLSGFESDKFT-LSSVFSAC 279

Query: 810 NQWDDVT 816
            + ++++
Sbjct: 280 AELENLS 286


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 228/803 (28%), Positives = 387/803 (48%), Gaps = 102/803 (12%)

Query: 193  DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
            D+ +   ++ +Y+  G   +++F+FD ++ +++  W  ++ +Y+ N   +EV   F+++ 
Sbjct: 474  DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533

Query: 252  HRSGLCPDDESVQCVLGV---ISDLG---KRHEEQVQAYAIKLLLYNN------------ 293
              + L PD  +  CV+     +SD+G     H   V+   ++ +   N            
Sbjct: 534  STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 593

Query: 294  -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN----VQYDSVTFLVA 338
                         N+V WN  +  +   G +  +      M+  N       D  T +  
Sbjct: 594  TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 653

Query: 339  LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------- 388
            L   A    + LG+ +HG  +K      +++ N+L++MYSK GC+   +           
Sbjct: 654  LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 713

Query: 389  --------------DQFTLASVLRAS---------------SSLPEGLHLS-----KQIH 414
                          D      VLR                 +++P   H S     K++H
Sbjct: 714  VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 773

Query: 415  VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
             +++K + V +  V+ A +  Y + GS++ A+ +F       + +WNA+I G+  SN+  
Sbjct: 774  CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 833

Query: 475  KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
             +L+    M  SG   D  T+ + + AC  L  L+ GK++H + +++  E DL V   +L
Sbjct: 834  LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 893

Query: 535  DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
             +Y+ CG +   Q++F+ +     V+W T+I+G + NG  D AL ++ QM L G+     
Sbjct: 894  SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 953

Query: 595  TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            +   +  A S L +L  GR+ HA  +K     D F+  SL+DMYAK G+I  +  +F  +
Sbjct: 954  SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 1013

Query: 655  DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              ++T  WNAM++G   HG  +E +KLFE+M+  G  PD +TF+GVL+AC+++GL+ E  
Sbjct: 1014 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 1073

Query: 715  ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL-SMPFEASASMHRALLGACR 773
                 M+  +G++P ++HY+ ++D LGRAG+  +A  ++   M  EA   + ++LL +CR
Sbjct: 1074 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 1133

Query: 774  VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA- 832
            +  + E G+ VA KL  LEP     YVLLSN++A   +W+DV   R  M   +++KD   
Sbjct: 1134 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 1193

Query: 833  ------DLIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                    +F+ V G                L  +I + GY PDT  V  D+ EEEK   
Sbjct: 1194 SWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ 1253

Query: 871  LYYHSEKLARAYGLISTPPSSVI 893
            L  HSEKLA  YGLI T   + I
Sbjct: 1254 LRGHSEKLALTYGLIKTSEGTTI 1276



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 201/737 (27%), Positives = 323/737 (43%), Gaps = 121/737 (16%)

Query: 52   SSSQWFSILRHAI--------STSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCG 102
            SSS  F ++R A+           D+ +G+  H  +  S+++  D  L   ++TMY+ CG
Sbjct: 430  SSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCG 489

Query: 103  SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
            S   +R +FD +  ++L  WN+++++Y+ +     + V E F     +  +       T 
Sbjct: 490  SPDDSRFVFDALRSKNLFQWNAVISSYSRNEL--YDEVLETF--IEMISTTDLLPDHFTY 545

Query: 163  APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
              ++K C     V     VHG  +K GLV D FV  ALV+ Y   G + +A  LFD M E
Sbjct: 546  PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 605

Query: 223  RDVVLWKVMLRAYAENGFGEEVFHLFVDLHR----SGLCPDDESVQCVLGVIS-----DL 273
            R++V W  M+R +++NGF EE F L  ++          PD  ++  VL V +      L
Sbjct: 606  RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 665

Query: 274  GKRHEEQVQAYAIKLLL----------------------------YNNNSNVVLWNKKLS 305
            GK     V  +A+KL L                             NNN NVV WN  + 
Sbjct: 666  GK----GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 721

Query: 306  GYLQVGDNHGAIECFVNMIR--SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
            G+   GD HG  +    M+    +V+ D VT L A+        L   +++H  +LK  F
Sbjct: 722  GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 781

Query: 364  YSAVIVGNSLINMYSKMGC----------------------------------------- 382
                +V N+ +  Y+K G                                          
Sbjct: 782  VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 841

Query: 383  --VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
              + GL  D FT+ S+L A S L + L L K++H   I+N    D FV  +++ +Y   G
Sbjct: 842  MKISGLLPDSFTVCSLLSACSKL-KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 900

Query: 441  SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
             +   + LF+  +   L +WN +I GY+ +    +AL +F  M   G +L  I++     
Sbjct: 901  ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 960

Query: 501  ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
            AC  L  L+ G++ HAYA+K   E D  ++  ++DMY K G++  +  +FN +      +
Sbjct: 961  ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 1020

Query: 561  WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
            W  MI G   +G    A+ ++ +M+ +G  PD+ TF         LTA      IH  L 
Sbjct: 1021 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL------GVLTACNHSGLIHEGLR 1074

Query: 621  KLDCSSDPFVGIS--------LVDMYAKCGNIEDAY-ILFKQMDMRNTV-LWNAMLVGLA 670
             LD     F G+         ++DM  + G ++ A  ++ ++M     V +W ++L    
Sbjct: 1075 YLDQMKSSF-GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 1133

Query: 671  QHGN---GEET-LKLFE 683
             H N   GE+   KLFE
Sbjct: 1134 IHQNLEMGEKVAAKLFE 1150



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 8/298 (2%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           ++A G    ++ G+++H     S     D  + + I+ MY  CG+  D++ +F+ + + +
Sbjct: 446 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 505

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
              W  +IS    N   D  L  + +M   + ++PD FT+  ++KA + ++ +  G  +H
Sbjct: 506 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 565

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             ++K     D FVG +LV  Y   G + DA  LF  M  RN V WN+M+   + +G  E
Sbjct: 566 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 625

Query: 677 ETLKLFEDMKAHGVE----PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           E+  L  +M     +    PD  T + VL  C+    +    +  H    K  ++ E+  
Sbjct: 626 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVL 684

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
            + L+D   + G    A ++I  M    +      ++G    +GDT     V  +++A
Sbjct: 685 NNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 741


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 223/676 (32%), Positives = 332/676 (49%), Gaps = 108/676 (15%)

Query: 348 LNLGQQIHGTTLKSGFYSAVIVG--------------NSLINMYSK-------MGCVCGL 386
           L   +QIH   +K+ F+ A+ +               N +I  Y+K       +     L
Sbjct: 56  LEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQL 115

Query: 387 R-----TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           R      D F   SVL+A   +     L K+IH   +K     D FV  AL+ +Y     
Sbjct: 116 RKMDFEVDNFMAPSVLKACGQV-SWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC 174

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +  A  +F+     D+ +W+ MI     +     ALEL   M+    R  E+ + + V  
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 234

Query: 502 CGCLLMLKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
                 ++ GK MHAY +++     + +  ++ +LDMY KCG +  A+ +FN +     V
Sbjct: 235 FADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV 294

Query: 560 AWTTMISGCVDNG--EE-----------------------------DLALSIYHQMRLSG 588
           +WT MI+GC+ +   EE                             D A +++ QMR SG
Sbjct: 295 SWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 354

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V P + T   L+   +   AL+ G+ +H+ + K     D  +  +LVDMYAKCG+I  A 
Sbjct: 355 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 414

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            LF +   R+  +WNA++ G A HG GEE L +F +M+  GV+P+ +TFIG+L ACS+ G
Sbjct: 415 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 474

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV+E  + F  M   +G+ P++EHY  +VD LGRAG   EA E+I SMP + +  +  AL
Sbjct: 475 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 534

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           + ACR+  + + G+  A +L+ +EP +    VL+SNI+AAAN+W D    R  MK   +K
Sbjct: 535 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 594

Query: 829 KDPADLIFAKVEGLI------------------------KRIKEGGYVPDTDFVLLDVEE 864
           K+P   +  +V G +                        +++ E GYVPDT  VLL+++E
Sbjct: 595 KEPGHSVI-EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 653

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA------- 902
           EEKE AL YHSEKLA A+GLIST PS+ I   K                 +Y        
Sbjct: 654 EEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRD 713

Query: 903 -NRFHHLRDGMCPCAD 917
            NRFHH R+G C C D
Sbjct: 714 RNRFHHFREGYCSCGD 729



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 211/469 (44%), Gaps = 42/469 (8%)

Query: 121 SWNSILAAYAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGYVWAS 178
            WN ++ +Y    +  NA NV    R        + F     +AP +LK C    +    
Sbjct: 91  QWNFVITSYTKRNQPRNALNVYAQLR-------KMDFEVDNFMAPSVLKACGQVSWTQLG 143

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +HG+ LK GL  D FV  AL+ +Y +   +  A+ +FD M ERDVV W  M+R+ + N
Sbjct: 144 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 203

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSNV 297
              +    L  +++   + P + ++  ++ + +D    R  + + AY I+     N++N 
Sbjct: 204 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIR-----NSNNE 258

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            +     +  L +    G +     +     Q   V++   +A    ++ L   + +  +
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV------------CGLRTDQFTLASVLRASSSLPE 405
           T        V++  ++++ Y++  C+             G+R  + T+ S+L +  ++  
Sbjct: 319 TQNRD----VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLL-SLCAVAG 373

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L L K +H +  K     D  ++TAL+D+Y + G +  A  LF      D+  WNA+I 
Sbjct: 374 ALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIIT 433

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMK 520
           G+ +     +AL++F+ M   G + ++IT    + AC    ++ +GK++     H + + 
Sbjct: 434 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV 493

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              E   C    ++D+  + G + +A  +   +P  P+ + W  +++ C
Sbjct: 494 PQIEHYGC----MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 538



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 183/414 (44%), Gaps = 81/414 (19%)

Query: 7   ANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST 66
           + L P  +  +VI +S+TK   RN P  +L++   L+K  F   +  +   S+L+     
Sbjct: 84  SGLSPSAQWNFVI-TSYTK---RNQPRNALNVYAQLRKMDFEVDNFMAP--SVLKACGQV 137

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S   LGK  H  +L      D F+ N LM MY  C  + YAR +FDKM +RD++SW++++
Sbjct: 138 SWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMI 197

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            + + + E +         L R +       S + +  ++ L   +  +   + +H Y +
Sbjct: 198 RSLSRNKEFDM-----ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVI 252

Query: 187 K------IGLVWDEFVSGALVNIYSKFG-------------------------------K 209
           +      +G+      + AL+++Y+K G                               +
Sbjct: 253 RNSNNEHMGVP----TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 308

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + EA+ LFD  Q RDV++W  ML AYA+    ++ F+LF  +  SG+ P   ++  +L +
Sbjct: 309 LEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSL 368

Query: 270 IS-----DLGKR-----HEEQVQAYAI-------------------KLLLYNNNSNVVLW 300
            +     DLGK       +E+V+   I                   +L +   + ++ +W
Sbjct: 369 CAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 428

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           N  ++G+   G    A++ F  M R  V+ + +TF+  L A +    +  G+++
Sbjct: 429 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 482



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 51/311 (16%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V +S+  +   RN   F ++L    + +      S     S++     T+++ +GK+ HA
Sbjct: 191 VSWSTMIRSLSRN-KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 249

Query: 78  RILNSSQ-----IPDRFLTNNLMTMYSRCGSLVYARRLF--------------------- 111
            ++ +S      +P    T  L+ MY++CG L  AR+LF                     
Sbjct: 250 YVIRNSNNEHMGVPT---TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRS 306

Query: 112 ----------DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
                     D   +RD++ W ++L+AYA      A  + + F LF  +R S    +++T
Sbjct: 307 NRLEEARALFDSTQNRDVMIWTAMLSAYAQ-----ANCIDQAFNLFDQMRTSGVRPTKVT 361

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +  LL LC  +G +   + VH Y  K  +  D  ++ ALV++Y+K G I  A  LF    
Sbjct: 362 IVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAI 421

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDLGK 275
            RD+ +W  ++  +A +G+GEE   +F ++ R G+ P+D +   +L      G++++  K
Sbjct: 422 SRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKK 481

Query: 276 RHEEQVQAYAI 286
             E+ V  + +
Sbjct: 482 LFEKMVHTFGL 492



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H+ I       D  L   L+ MY++CG +  A RLF +   RD+  WN+I+  +A
Sbjct: 377 LGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA 436

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET-----VHGYA 185
             G G      E   +F  +       + +T   LL  C  +G V   +      VH + 
Sbjct: 437 MHGYGE-----EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF- 490

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
              GLV      G +V++  + G + EA  +   M  + + ++W  ++ A
Sbjct: 491 ---GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 198/560 (35%), Positives = 314/560 (56%), Gaps = 53/560 (9%)

Query: 411 KQIHVHAIKND-TVADSFVSTALIDVYCRNGS---MAEAEYLFEN-KDGFDLATWNAMIF 465
           +QIH  +I++  +++D+ +   LI       S   M+ A  +F   +   ++  WN +I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 466 GYILSNNSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
           GY    NS  A  L+  M  SG    D  T    +KA   +  ++ G+ +H+  ++SGF 
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             + V + +L +Y  CG +  A  +F+ +P  D VAW ++I+G  +NG+ + AL++Y +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
              G+ PD FT   L+ A + + AL  G+++H  +IK+  + +      L+D+YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVEPDSVTFIGVLSA 703
           E+A  LF +M  +N+V W +++VGLA +G G+E ++LF+ M++  G+ P  +TF+G+L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ G+V E +E F  MRE+Y IEP +EH+  +VD L RAG+ K+A E I SMP + +  
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           + R LLGAC V GD++  ++   +++ LEP  S  YVLLSN++A+  +W DV   R +M 
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 824 RKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
           R  VKK P                       +D I+AK++ +  R++  GYVP    V +
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEP 899
           DVEEEEKE A+ YHSEK+A A+ LISTP  S I                     + N+E 
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573

Query: 900 LYAN--RFHHLRDGMCPCAD 917
           +  +  RFHH ++G C C D
Sbjct: 574 VVRDRSRFHHFKNGSCSCQD 593



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 177/332 (53%), Gaps = 12/332 (3%)

Query: 369 VGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
           +GNS+   ++Y +M     +  D  T   +++A +++ + + L + IH   I++   +  
Sbjct: 98  IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD-VRLGETIHSVVIRSGFGSLI 156

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V  +L+ +Y   G +A A  +F+     DL  WN++I G+  +    +AL L++ M++ 
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G + D  TI + + AC  +  L  GK++H Y +K G   +L  S+ +LD+Y +CG + +A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSC 605
           +++F+++   + V+WT++I G   NG    A+ ++  M  + G++P E TF  ++ A S 
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336

Query: 606 LTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
              +++G +    +    K++   + F    +VD+ A+ G ++ AY   K M M+ N V+
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFG--CMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           W  +L     HG+ +  L  F  ++   +EP+
Sbjct: 395 WRTLLGACTVHGDSD--LAEFARIQILQLEPN 424



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 7/220 (3%)

Query: 57  FSILRHAIST-SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           +  L  A++T +D+ LG++ H+ ++ S      ++ N+L+ +Y+ CG +  A ++FDKMP
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++DL++WNS++  +A +G+       E   L+  +          T+  LL  C   G +
Sbjct: 184 EKDLVAWNSVINGFAENGKPE-----EALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH Y +K+GL  +   S  L+++Y++ G++ EAK LFD M +++ V W  ++   
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298

Query: 236 AENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLG 274
           A NGFG+E   LF  +  + GL P + +   +L   S  G
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 173/417 (41%), Gaps = 65/417 (15%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           FSI RH +S SD  LGK     +++    P                 + YA ++F K+  
Sbjct: 39  FSI-RHGVSISDAELGKHLIFYLVSLPSPP----------------PMSYAHKVFSKIEK 81

Query: 117 R-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGY 174
             ++  WN+++  YA  G     N    F L+R +R S          P L+K   +   
Sbjct: 82  PINVFIWNTLIRGYAEIG-----NSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD 136

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V   ET+H   ++ G     +V  +L+++Y+  G +  A  +FD M E+D+V W  ++  
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN 293
           +AENG  EE   L+ +++  G+ PD  ++  +L   + +G     ++V  Y IK+ L  N
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256

Query: 294 --NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
             +SNV+     L  Y + G    A   F  M+  N      + +V LA           
Sbjct: 257 LHSSNVL-----LDLYARCGRVEEAKTLFDEMVDKN-SVSWTSLIVGLAV---------- 300

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLH 408
                    +GF      G   I ++  M    GL   + T   +L A S    + EG  
Sbjct: 301 ---------NGF------GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFDLATWNAMI 464
             +++     K +   + F    ++D+  R G + +A EY+       ++  W  ++
Sbjct: 346 YFRRMR-EEYKIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LGK  H  ++      +   +N L+ +Y+RCG +  A+ LFD+M D+
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLC-----LS 171
           + +SW S++   A +G G      E   LF+ +  +       +T   +L  C     + 
Sbjct: 287 NSVSWTSLIVGLAVNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 341

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKV 230
            G+ +       Y  KI    + F  G +V++ ++ G++++A      M  + +VV+W+ 
Sbjct: 342 EGFEYFRRMREEY--KIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397

Query: 231 MLRAYAENG 239
           +L A   +G
Sbjct: 398 LLGACTVHG 406


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 189/556 (33%), Positives = 309/556 (55%), Gaps = 47/556 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++ IH H   +      F+  +LI +YC+ G++A+A  +F+     D+ +W ++I GY  
Sbjct: 83  ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++   +AL L   M     + +  T A+ +KA G       G+Q+HA  +K  +  D+ V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S +LDMY +CG M  A ++F+ + + + V+W  +I+G    G+ +  L ++ +M+ +G 
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FT++ +  A + + ALEQG+ +HA++IK       FVG +++DMYAK G++ DA  
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++D ++ V WN+ML   AQ+G G E +  FE+M+  GV  + +TF+ +L+ACS+ GL
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E  + F +M+E Y +EPE++HY  +VD LGRAG   +A   I  MP + +A++  ALL
Sbjct: 383 VKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           G+CR+  + + G++ A+ +  L+P D+   VLL NI+A+  QWD     R  MK   VKK
Sbjct: 442 GSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKK 501

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           +PA                       + I+ K E +  +I++ GYVP+TD+VLL V+E+E
Sbjct: 502 EPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQE 561

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--AN 903
           ++  L YHSEK+A A+ LI+ P  + I                     +  +E +    N
Sbjct: 562 RQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTN 621

Query: 904 RFHHLRDGMCPCADNC 919
           RFHH   G C C D C
Sbjct: 622 RFHHFSSGSCSCGDYC 637



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 123/215 (57%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L   + +HA+   S F   + + + ++ +Y KCGA+ DA+ +F+ +PA D 
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            +WT++I+G   N   D AL +   M      P+ FTFA L+KA+    +   G QIHA 
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K D   D +VG +L+DMYA+CG ++ A  +F Q++ +N V WNA++ G A+ G+GE T
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           L +F +M+ +G E    T+  V SA +  G + + 
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 285



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 47/383 (12%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR----------- 387
           + A A   +L+  + IH     S F  +V + NSLI++Y K G V   R           
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 388 --------------------------------TDQFTLASVLRAS-SSLPEGLHLSKQIH 414
                                            + FT AS+L+A+ +S   G+   +QIH
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGI--GEQIH 188

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K D   D +V +AL+D+Y R G M  A  +F+  +  +  +WNA+I G+    +  
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
             L +F+ M  +G      T ++   A   +  L+QGK +HA+ +KSG  L   V + IL
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY K G+M+DA+ +F+ +   D V W +M++     G    A++ + +MR  GV  ++ 
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  ++ A S    +++G+Q    + + +   +    +++VD+  + G + DA +   +M
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 655 DMRNT-VLWNAMLVGLAQHGNGE 676
            M+ T  +W A+L     H N +
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAK 451



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 34/311 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            ++ HA +  S      FL N+L+ +Y +CG++  ARR+FD MP RD+ SW S++A YA 
Sbjct: 83  ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     +   E   L   +       +  T A LLK   +S      E +H   +K    
Sbjct: 143 N-----DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWH 197

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  AL+++Y++ G++  A  +FD ++ ++ V W  ++  +A  G GE    +F ++
Sbjct: 198 DDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEM 257

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK-------------LLLYN----- 292
            R+G      +   V   I+ +G   + + V A+ IK             L +Y      
Sbjct: 258 QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSM 317

Query: 293 ----------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                     +  +VV WN  L+ + Q G    A+  F  M +  V  + +TFL  L A 
Sbjct: 318 IDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377

Query: 343 AGTDNLNLGQQ 353
           +    +  G+Q
Sbjct: 378 SHGGLVKEGKQ 388



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 119/227 (52%), Gaps = 7/227 (3%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           ++P  +L LLP + +  F  +  +  + S+L+ A +++   +G+  HA  +      D +
Sbjct: 144 DMPDEALGLLPGMLRGRFKPNGFT--FASLLKAAGASASSGIGEQIHALTVKYDWHDDVY 201

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ MY+RCG +  A  +FD++  ++ +SWN+++A +A  G+G          +F  
Sbjct: 202 VGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT-----LLMFAE 256

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++ +    +  T + +       G +   + VH + +K G     FV   ++++Y+K G 
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 316

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + +A+ +FD + ++DVV W  ML A+A+ G G E    F ++ + G+
Sbjct: 317 MIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 363



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 52/304 (17%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+  +L+++Y K G + +A+ +FDGM  RD+  W  ++  YA+N   +E   L   + R 
Sbjct: 100 FLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159

Query: 255 GLCPDDESVQCVLGVI-----SDLGKRHEEQVQAYAIKLLLYNN---------------- 293
              P+  +   +L        S +G    EQ+ A  +K   +++                
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIG----EQIHALTVKYDWHDDVYVGSALLDMYARCGR 215

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                       + N V WN  ++G+ + GD    +  F  M R+  +    T+    +A
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR--------TDQFTL 393
           +AG   L  G+ +H   +KSG   +  VGN++++MY+K G +   R         D  T 
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
            S+L A +    GL      H   ++   V  + ++   I   C +G + +     E K 
Sbjct: 336 NSMLTAFAQY--GLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVK-----EGKQ 388

Query: 454 GFDL 457
            FD+
Sbjct: 389 YFDM 392



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 21/232 (9%)

Query: 552 DIPAPDDVAWTTMISGCVDNGE-EDLALS--IYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           DIP P   A T +I   +D+ +  +LA +  +YH                L+ A +   +
Sbjct: 36  DIPVPA-AASTGIIRDTLDSVDARELAATPRLYHS---------------LITACARYRS 79

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L+  R IHA+L     +   F+  SL+ +Y KCG + DA  +F  M  R+   W +++ G
Sbjct: 80  LDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAG 139

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQ+   +E L L   M     +P+  TF  +L A   +   S   E  H +  KY    
Sbjct: 140 YAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASA-SSGIGEQIHALTVKYDWHD 198

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +V   S L+D   R GR   A  +   +  +   S +  + G  R +GD ET
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR-KGDGET 249



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 29/234 (12%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
            + +HF+ SS  S    I         L  GK  HA ++ S +    F+ N ++ MY++ 
Sbjct: 262 FEATHFTYSSVFSAIAGI-------GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKS 314

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           GS++ AR++FD++  +D+++WNS+L A+A  G G  E VT     F  +R+     +++T
Sbjct: 315 GSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR-EAVTH----FEEMRKCGVHLNQIT 369

Query: 162 LAPLLKLCLSSGYVWAS----ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFL 216
              +L  C   G V       + +  Y L+  +  D +V+  +V++  + G + +A  F+
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEI--DHYVT--VVDLLGRAGLLNDALVFI 425

Query: 217 FDGMQERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           F    +    +W  +L   R +     G+     F   H   L PDD     +L
Sbjct: 426 FKMPMKPTAAVWGALLGSCRMHKNAKIGQ-----FAADHVFELDPDDTGPPVLL 474


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 220/751 (29%), Positives = 370/751 (49%), Gaps = 66/751 (8%)

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E  +L+    +S  +T+R T   LLK C S   +   +T+H   +  GL  D++++ +L+
Sbjct: 39  EALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLI 95

Query: 202 NIYSKFGKIREAKFLFD-----GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           NIY K G   +A  +FD     G+   DV +W  ++  Y   G  EE    F  +  SG 
Sbjct: 96  NIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY 155

Query: 257 CPDDESVQCVL------------GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL 304
               +    ++             +I    K        Y  K L   + SN+V WN  +
Sbjct: 156 KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKL--KDRSNIVAWNVMI 213

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
            G+ + G    ++E ++     NV+  S +F   L+A    + ++ G+Q+H   +K GF 
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFE 273

Query: 365 SAVIVGNSLINMYSKMGCV----------------------------------------- 383
               V  SL+ MY K   +                                         
Sbjct: 274 DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM 333

Query: 384 --CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
             C + +D FT+ +VL  SSS+     L + IH   +K    +   + +AL+ +Y + G 
Sbjct: 334 KLCTVLSDSFTILNVL-TSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGD 392

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
              A  +F      D+  W ++I G+  +    +AL+ F  M     + D   +A+ + A
Sbjct: 393 SNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISA 452

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  +  G  +H + +KSG +LD+ V+S +LDMY K G    A +IF+D+P  + VAW
Sbjct: 453 CTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAW 512

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            ++IS    N   DL+++++ Q+  + + PD  +F  ++ A S + AL +G+ +H  L++
Sbjct: 513 NSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVR 572

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
           L    D  V  +L+DMY KCG ++ A  +F+++  +N V WN+M+ G   HG   + ++L
Sbjct: 573 LWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIEL 632

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F++M++ G++PD VTF+ +LS+C+++GL+ E    F +M+ K+GIEP +EHY  +VD  G
Sbjct: 633 FDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYG 692

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG   +A   + +MP E   S+  +LL +C++  + E G+ VA KL+ +EP   S YV 
Sbjct: 693 RAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQ 752

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L N++  A  WD   + R  MK K +KK P 
Sbjct: 753 LLNLYGEAELWDRTANLRASMKEKGLKKTPG 783



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 184/704 (26%), Positives = 318/704 (45%), Gaps = 116/704 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   S S+L  GK+ H+ I+ +    D+++T++L+ +Y +CG+   A ++FD++P  
Sbjct: 58  SLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKS 117

Query: 118 -----DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
                D+  WNSI+  Y              FR F  L E +    R+          SS
Sbjct: 118 GVSVDDVTIWNSIIDGY--------------FR-FGQLEEGMVQFGRMQ---------SS 153

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVM 231
           GY    + +H Y ++  L +D F+  AL++ Y K G+  EA++LF  +++R ++V W VM
Sbjct: 154 GYK-EGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVM 212

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-----GVISDLGKRHEEQVQAYAI 286
           +  + ENG  E     ++      +     S  C L     G     GK    QV   AI
Sbjct: 213 IGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGK----QVHCDAI 268

Query: 287 K-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIE 318
           K             L +Y                 +  + LWN  +S Y+  G  + A+ 
Sbjct: 269 KVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALR 328

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            +  M    V  DS T L  L + +     +LG+ IH   +K    S++ + ++L+ MYS
Sbjct: 329 IYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYS 388

Query: 379 KMG----------------------CVCG---------------------LRTDQFTLAS 395
           K G                       + G                     ++ D   +AS
Sbjct: 389 KFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMAS 448

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           ++ A + L E + L   IH   IK+    D FV+++L+D+Y + G    A  +F +    
Sbjct: 449 IISACTGL-EKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK 507

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           +L  WN++I  Y  +N    ++ LFS +  +    D ++  + + A   +  L +GK +H
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVH 567

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
            Y ++     DL V + ++DMY+KCG +  AQ IF  I   + VAW +MI G   +GE  
Sbjct: 568 GYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECS 627

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--IS 633
            A+ ++ +MR SG+ PD+ TF  L+ + +    +E+G  +   ++K+    +P +   ++
Sbjct: 628 KAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLF-EMMKMKFGIEPRMEHYVN 686

Query: 634 LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +VD+Y + G + DAY   K M +  +  +W ++L     H N E
Sbjct: 687 IVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLE 730



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 225/490 (45%), Gaps = 39/490 (7%)

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           IE      +S V     T+   L A A   NL  G+ IH + + +G +S   + +SLIN+
Sbjct: 38  IEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINI 97

Query: 377 YSKMGCVCGLRTDQFTLASVLRAS--------------------SSLPEGL--------- 407
           Y K    CG  TD   +   L  S                      L EG+         
Sbjct: 98  YVK----CGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS 153

Query: 408 --HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMI 464
                KQIH + ++N    D F+ TALID Y + G   EA YLF+  KD  ++  WN MI
Sbjct: 154 GYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            G+  +     +LE +    T   ++   +    + ACG    +  GKQ+H  A+K GFE
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFE 273

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D  V + +L MY KC  +  A+ +FN++P  +   W  +IS  V NG    AL IY QM
Sbjct: 274 DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM 333

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           +L  V+ D FT   ++ +SS     + GR IH  ++K    S   +  +L+ MY+K G+ 
Sbjct: 334 KLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDS 393

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             A  +F  M  R+ V W +++ G  Q+   +E L  F  M+A  V+PDS     ++SAC
Sbjct: 394 NYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISAC 453

Query: 705 SYTGLVS-EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
             TGL   +     H    K G++ +V   S L+D   + G  + AG +   MP +   +
Sbjct: 454 --TGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVA 511

Query: 764 MHRALLGACR 773
            +  +   CR
Sbjct: 512 WNSIISCYCR 521



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           NLP  S++L   + ++     S S  + S+L    S + LL GKS H  ++      D  
Sbjct: 523 NLPDLSINLFSQVLRNDLYPDSVS--FTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQ 580

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N L+ MY +CG L YA+ +F+++ +++L++WNS++  Y   GE      ++   LF  
Sbjct: 581 VENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGE-----CSKAIELFDE 635

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY---ALKIGL--VWDEFVSGALVNIY 204
           +R S      +T   LL  C  SG +   E +H +    +K G+    + +V+  +V++Y
Sbjct: 636 MRSSGIKPDDVTFLSLLSSCNHSGLI--EEGLHLFEMMKMKFGIEPRMEHYVN--IVDLY 691

Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            + G + +A      M  E D  +W  +L
Sbjct: 692 GRAGCLGDAYSFVKNMPVEPDRSIWLSLL 720


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 206/656 (31%), Positives = 337/656 (51%), Gaps = 91/656 (13%)

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGC----------------------VCGL--- 386
           QQIH   + SG      + NSL+N Y   G                       + GL   
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 387 ------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                             + +  T++SVL A ++L   + ++K +H   ++     + FV
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGL-IRIAKSVHCFWVRGGFEGNVFV 159

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            TAL+D+Y + G M  A  LFE+    ++ TWNA++ GY     S +A++LF+ M   G 
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
            +D  TI + + A   +  L+ G  +H + +++G+E D  + + ++D+YV    + DA  
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLT 607
           +F+++   D  AWT M++G       D A+  +++M  +  +  D      ++ + S   
Sbjct: 280 VFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSG 339

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           AL+QGR++HA  IK   +++ FVG +++DMYA CGN+EDA   F  M  ++ V WNAM+ 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G   +G G + + LF  MK  G++PD  TF+ VL ACS+ G+V E  + F+ M +   + 
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVI 459

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P ++HY+ ++D LGRAG+   A   I +MPF+    ++  LLGACR+ G+ + G  +++K
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           +  +EP D+  YVLLSN++A A  W+ V   R  ++ K +KKDP                
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMA 579

Query: 833 ----DLIFAKVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  + K+EG++K    +IK+ GYVP+T+ +L DV ++ K+  LY+HSEK+A A+GL
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGL 639

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           + T P ++I   K                           ANRFH  +DG+C C D
Sbjct: 640 MRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 186/364 (51%), Gaps = 6/364 (1%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS+LR    L       +QIH   I +    ++F+S +L++ Y   G +A+A+ +F +  
Sbjct: 28  ASILRKLKDLKP----LQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP 83

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             ++ +W  +I G   ++   +A+++F  M     + + +TI++ + A   L +++  K 
Sbjct: 84  YKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKS 143

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H + ++ GFE ++ V + ++DMY K G M  A+ +F  +   + V W  ++SG  D+G 
Sbjct: 144 VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGF 203

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            + A+ +++ MR  G++ D +T   L+ AS  +  L+ G  IH  +I+    +D  +  +
Sbjct: 204 SEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTA 263

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVEP 692
           L+D+Y     ++DA+ +F +M +++   W  ML G +   + +  +K F  M     ++ 
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKL 323

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           DS+  +G+LS+CS++G + +     H +  K      +   S ++D     G  ++A   
Sbjct: 324 DSIALMGILSSCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382

Query: 753 ILSM 756
              M
Sbjct: 383 FYGM 386



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 220/505 (43%), Gaps = 100/505 (19%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           YR+L S     L  L + H S          ILR      DL   +  HA+I+ S    +
Sbjct: 9   YRHLSSNPTQRLSPLAQPHAS----------ILR---KLKDLKPLQQIHAQIITSGLTHN 55

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            FL+N+LM  Y  CG L  A+++F   P ++++SW  ++     SG    +   E   +F
Sbjct: 56  TFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILI-----SGLAKNDCFVEAIDVF 110

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           R +       + +T++ +L    + G +  +++VH + ++ G   + FV  ALV++YSKF
Sbjct: 111 REMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG----------LC 257
           G +  A+ LF+ M ER+VV W  ++  Y+++GF EE   LF  + R G          L 
Sbjct: 171 GCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230

Query: 258 PDDESVQC------VLGVISDLGKRHEEQVQAYAIKLLLYNNN-------------SNVV 298
           P   SV C      + G I   G  +++ ++   + + + +N               +V 
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVA 290

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            W   L+G+        AI+ F  M+   N++ DS+  +  L++ + +  L  G+++H  
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHAL 350

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG----------------CVC----------------- 384
            +K+ F + + VG+++I+MY+  G                 VC                 
Sbjct: 351 AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDA 410

Query: 385 ----------GLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                     GL  D+ T  SVL A S    + EGL    QI  H +K   V  +    A
Sbjct: 411 IDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGL----QIFYHMVKTSHVIPNLQHYA 466

Query: 432 -LIDVYCRNGSMAEAEYLFENKDGF 455
            +ID+  R G + +A Y F N   F
Sbjct: 467 CVIDILGRAGQL-DAAYSFINNMPF 490



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 33/350 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++  ++S   L +G   H  I+ +    D+ +   LM +Y     +  A R+F +M  +
Sbjct: 228 SLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVK 287

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ +W  +L  ++ SG  + +   + F     + +++   S + L  +L  C  SG +  
Sbjct: 288 DVAAWTLMLTGFS-SGR-HWDRAIKHFNKMLGI-QNLKLDS-IALMGILSSCSHSGALQQ 343

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VH  A+K     + FV  A++++Y+  G + +AK  F GM E+DVV W  M+     
Sbjct: 344 GRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGM 403

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLLLYNNNSN 296
           NG+G +   LF+ +  SGL PD+ +   VL   S  G  +E  Q+  + +K       S+
Sbjct: 404 NGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK------TSH 457

Query: 297 VVLWNKKLSGYLQVGDNHG------AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
           V+     L  Y  V D  G      A   F+N +     +D  + L+    + G  N+ L
Sbjct: 458 VI---PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG--NIKL 512

Query: 351 GQQIHGTTLK-----SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
           G +I     +     +G+Y        L NMY+  G   G++  + +L S
Sbjct: 513 GHEISQKIFEMEPNDAGYYVL------LSNMYALAGNWEGVKMTRASLRS 556


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 227/682 (33%), Positives = 347/682 (50%), Gaps = 80/682 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A++ ++ MI   +  DS TF   L + A
Sbjct: 41  YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCA 100

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK GF   + V  SLI+MY++ G +   R   F ++S        
Sbjct: 101 KSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARK-VFDISS-------- 151

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
                            D V+     TALI  Y   G +  A+ LF+   G D+ +WNAM
Sbjct: 152 ---------------HRDVVS----YTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAM 192

Query: 464 IFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           I GY+ + N  +ALELF  M   +  R DE T+ T V AC     ++ G+ +H++    G
Sbjct: 193 ISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHG 252

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  +L + + ++D+Y K G +  A  +F+ +   D ++W T+I G         AL ++ 
Sbjct: 253 FASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQ 312

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYA 639
           +M  SG  P++ T   ++ A + L A++ GR IH  +   +K   ++   +  SL+DMYA
Sbjct: 313 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYA 372

Query: 640 KCGNIEDAYILF-KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           KCG+I+ A  +F   M  R+   WNAM+ G A HG       +F  M+ +G+EPD +TF+
Sbjct: 373 KCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFV 432

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
           G+LSACS++G++      F  M   Y I P++EHY  ++D LG +G  KEA E+I +MP 
Sbjct: 433 GLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPM 492

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E    +  +LL AC++ G+ E G+  A+KL+ +EP +S +YVLLSNI+AAA +W++V   
Sbjct: 493 EPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKI 552

Query: 819 RGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------------------GYVPD 854
           R  +  K +KK        +++ ++     G                        G+VPD
Sbjct: 553 RALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPD 612

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN---------------- 896
           T  VL ++EEE +E AL +HSEKLA A+GLIST P +   I+ N                
Sbjct: 613 TSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISK 672

Query: 897 --KEPLYA---NRFHHLRDGMC 913
             K  + A    RF H RDG+C
Sbjct: 673 IYKREIIARDRTRFXHFRDGVC 694



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 233/530 (43%), Gaps = 99/530 (18%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
           YA  +FD + + +L+ WN++   +A S +          +L+  +          T   L
Sbjct: 41  YAISVFDTIQEPNLLIWNTMFRGHALSSDP-----VSALKLYLVMISLGLLPDSYTFPFL 95

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LK C  S      + +HG+ LK+G   D +V  +L+++Y++ G++ +A+ +FD    RDV
Sbjct: 96  LKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDV 155

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYA 285
           V +  ++  Y   G+ E    LF ++                      GK          
Sbjct: 156 VSYTALIAGYVSRGYIESAQKLFDEIP---------------------GK---------- 184

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN-MIRSNVQYDSVTFLVALAAVAG 344
                     +VV WN  +SGY++ G+   A+E F   M+ +NV+ D  T +  ++A A 
Sbjct: 185 ----------DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQ 234

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
           +D++ LG+ +H      GF S + + N+LI++YSK G V                     
Sbjct: 235 SDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTL 294

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH---AI 418
                                  G   +  T+ S+L A + L   + + + IHV+    +
Sbjct: 295 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG-AIDIGRWIHVYINKKL 353

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK-DGFDLATWNAMIFGYILSNNSHKAL 477
           K      S + T+LID+Y + G +  A+ +F++      L+TWNAMI G+ +   ++ A 
Sbjct: 354 KGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAF 413

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILD 535
           ++FS M  +G   D+IT    + AC    ML  G+ +   +M  G+E+   L     ++D
Sbjct: 414 DIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR-SMTRGYEITPKLEHYGCMID 472

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +    G   +A+ + N +P  PD V W +++  C  +G  +L  S   ++
Sbjct: 473 LLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKL 522



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 239/518 (46%), Gaps = 33/518 (6%)

Query: 181 VHGYALKIGLVWDEFVSGALVN---IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +H   +K GL    +    L+    +   F     A  +FD +QE ++++W  M R +A 
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNSN 296
           +        L++ +   GL PD  +   +L   +    R E +Q+  + +KL     + +
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGF---DLD 123

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG--TDNLNLGQQI 354
           + +    +S Y Q G    A + F   I S+    S T L+A     G       L  +I
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFD--ISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181

Query: 355 HGTTLKSGFYSAVIVG-------NSLINMYSKMGCVCGLRTDQFTLASVLRA---SSSLP 404
            G  + S  ++A+I G          + ++ +M  +  +R D+ T+ +V+ A   S S+ 
Sbjct: 182 PGKDVVS--WNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIE 239

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
            G H+   I+ H   ++      +  ALID+Y + G +  A  LF+     D+ +WN +I
Sbjct: 240 LGRHVHSWINDHGFASNLK----IVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLI 295

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY   N   +AL LF  M  SGE  +++T+ + + AC  L  +  G+ +H Y  K    
Sbjct: 296 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKG 355

Query: 525 LDLCVSS---GILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSI 580
           +   VSS    ++DMY KCG +  AQ +F+   +   ++ W  MISG   +G  + A  I
Sbjct: 356 VVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDI 415

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMYA 639
           + +MR++G+ PD+ TF  L+ A S    L+ GR I  ++ +  + +        ++D+  
Sbjct: 416 FSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLG 475

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
             G  ++A  +   M M  + V+W ++L     HGN E
Sbjct: 476 HSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 513



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 39/295 (13%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+  Y   G +  A++LFD++P +D++SWN++++ Y  +G     N  E   LF+ +   
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETG-----NYKEALELFKEMMMM 215

Query: 154 ITF-TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                   T+  ++  C  S  +     VH +    G   +  +  AL+++YSKFG++  
Sbjct: 216 TNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVET 275

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----- 267
           A  LFDG+  +DV+ W  ++  Y      +E   LF ++ RSG  P+D ++  +L     
Sbjct: 276 ACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 335

Query: 268 -------------------GVISDLGKRHEEQVQAY-------AIKLLLYNNNSNVVL-- 299
                              GV++++       +  Y       A + +  ++ SN  L  
Sbjct: 336 LGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLST 395

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           WN  +SG+   G  + A + F  M  + ++ D +TF+  L+A + +  L+LG+ I
Sbjct: 396 WNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNI 450



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 48/282 (17%)

Query: 512 KQMHAYAMKSGFE---------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           + +HA  +K+G           L+ CV S   D +        A S+F+ I  P+ + W 
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPY------AISVFDTIQEPNLLIWN 58

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           TM  G   + +   AL +Y  M   G++PD +TF  L+K+ +     ++G+QIH +++KL
Sbjct: 59  TMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKL 118

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDA--------------------------YI-----LF 651
               D +V  SL+ MYA+ G +EDA                          YI     LF
Sbjct: 119 GFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLF 178

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLV 710
            ++  ++ V WNAM+ G  + GN +E L+LF++M     V PD  T + V+SAC+ +  +
Sbjct: 179 DEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSI 238

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
            E   + H     +G    ++  + L+D   + G  + A EL
Sbjct: 239 -ELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACEL 279



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 14/214 (6%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H+ I +     +  + N L+ +YS+ G +  A  LFD + ++D+ISWN+++  Y 
Sbjct: 240 LGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYT 299

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--I 188
           H          E   LF+ +  S    + +T+  +L  C   G +     +H Y  K   
Sbjct: 300 H-----MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLK 354

Query: 189 GLVWD-EFVSGALVNIYSKFGKIREAKFLFD-GMQERDVVLWKVMLRAYAENGFGEEVFH 246
           G+V +   +  +L+++Y+K G I  A+ +FD  M  R +  W  M+  +A +G     F 
Sbjct: 355 GVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFD 414

Query: 247 LFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +F  +  +G+ PDD +   +L   S     DLG+
Sbjct: 415 IFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGR 448


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 243/842 (28%), Positives = 389/842 (46%), Gaps = 156/842 (18%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK----IREAKFLFD 218
           A LL+LC ++    A   +H +A+K GL+   ++   L+  Y+  G      REA+ LFD
Sbjct: 213 ARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFD 272

Query: 219 GMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
            +    R+   W  +L  YA++G   +   +F ++      PD ++V             
Sbjct: 273 DIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEM------PDRDAVS------------ 314

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                                  W   + G  + G    A++ F++M+         T  
Sbjct: 315 -----------------------WTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLT 351

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
             L++ A  +   +G+++H   +K G  S V V NS++ MY K G       D  T  +V
Sbjct: 352 NVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCG-------DAETARAV 404

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                         +++ V ++ +  V        ++ +Y   G M  A  +FEN     
Sbjct: 405 F-------------ERMQVRSVSSWNV--------MVSLYTHQGRMELAVSMFENMVERS 443

Query: 457 LATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           + +WN +I GY  +     AL+ FS M   S    D  T+ + + AC  L MLK GKQMH
Sbjct: 444 IVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMH 503

Query: 516 AYAMKSGF---------------------------------ELDLCVSSGILDMYVKCGA 542
           +Y +++G                                  +L++   + +L+ YVK G 
Sbjct: 504 SYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGD 563

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
              A+ IF+ +   D +AWT MI G   NG+ D A+ ++  M L G  P+  T A ++ A
Sbjct: 564 TKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSA 623

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN-TVL 661
            + L  L+ G+QIH   I+        V  +++ +YA+ G++  A  +F Q+  R  T+ 
Sbjct: 624 CASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT 683

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           W +M+V +AQHG GE+ + LFE+M   GV+PD +T++GVLSAC++ G V +    +  M+
Sbjct: 684 WTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQ 743

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
            ++GI P++ HY+ +VD   RAG   EA E I  MP      +  +LL ACRV+ + +  
Sbjct: 744 NEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLA 803

Query: 782 KWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------- 832
           +  A KL++++P +S AY  L+N+++A  +W+D        K K VKK+           
Sbjct: 804 ELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGK 863

Query: 833 --------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
                         D I+ K   + + IK+ G+VPD + VL DV++E KE  L  HSEKL
Sbjct: 864 VHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKL 923

Query: 879 ARAYGLISTPPSSV--ILSN-------------------KEPLY--ANRFHHLRDGMCPC 915
           A A+GLISTP  +   I+ N                   +E +   A RFHH RDG C C
Sbjct: 924 AIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSC 983

Query: 916 AD 917
            D
Sbjct: 984 KD 985



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 159/647 (24%), Positives = 296/647 (45%), Gaps = 82/647 (12%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F  N+L+++Y++ G L  A  +F +MPDRD +SW  ++     SG        +  + F 
Sbjct: 282 FTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGR-----FWDAVKTFL 336

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            +       S+ TL  +L  C +         VH + +K+GL     V+ +++ +Y K G
Sbjct: 337 DMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCG 396

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
               A+ +F+ MQ R V  W VM+  Y   G  E    +F                    
Sbjct: 397 DAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMF-------------------- 436

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SN 327
                    E  V+             ++V WN  ++GY Q G +  A++ F  M+  S+
Sbjct: 437 ---------ENMVE------------RSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASS 475

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           ++ D+ T    L+A A    L +G+Q+H   L++G   +  + N+LI+ Y+K G V    
Sbjct: 476 MEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSV---- 531

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                                 +++I   A+  D    SF  TAL++ Y + G   +A  
Sbjct: 532 --------------------ETARRIMDQAVVADLNVISF--TALLEGYVKLGDTKQARE 569

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+  +  D+  W AMI GY  +  + +A+ELF  M   G   +  T+A  + AC  L  
Sbjct: 570 IFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAY 629

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMIS 566
           L  GKQ+H  A++S  E  + VS+ I+ +Y + G++  A+ +F+ I    + + WT+MI 
Sbjct: 630 LDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIV 689

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
               +G  + A+ ++ +M   GV PD  T+  ++ A +    +++G++ +  + + +   
Sbjct: 690 AMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQM-QNEHGI 748

Query: 627 DPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFE 683
            P +     +VD++A+ G + +A+   ++M +  +TV+W ++L       N +  L    
Sbjct: 749 VPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNAD--LAELA 806

Query: 684 DMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             K   ++P +S  +  + +  S  G  ++A   + L ++K G++ E
Sbjct: 807 AGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDK-GVKKE 852



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 41/324 (12%)

Query: 75  THARILNSSQIPDRFLTN--NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           T  RI++ + + D  + +   L+  Y + G    AR +FD M +RD+I+W +++  Y  +
Sbjct: 533 TARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQN 592

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+ +     E   LFRS+       +  TLA +L  C S  Y+   + +H  A++     
Sbjct: 593 GQND-----EAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQ 647

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              VS A++ +Y++ G +  A+ +FD +   ++ + W  M+ A A++G GE+   LF ++
Sbjct: 648 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEM 707

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
            R G+ PD  +   VL   +     D GKR+ EQ+Q          N   +V    ++S 
Sbjct: 708 VRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQ----------NEHGIV---PQMSH 754

Query: 307 YLQVGDNHGA----IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL--- 359
           Y  + D H       E    + R  V  D+V +   LAA     N +L +   G  L   
Sbjct: 755 YACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSID 814

Query: 360 --KSGFYSAVIVGNSLINMYSKMG 381
              SG YSA      L N+YS  G
Sbjct: 815 PHNSGAYSA------LANVYSACG 832



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 85/398 (21%), Positives = 150/398 (37%), Gaps = 103/398 (25%)

Query: 71  LGKSTHARILN---SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           +G+  H  ++    SS +P   + N+++ MY +CG    AR +F++M  R + SWN +++
Sbjct: 365 VGRKVHPFVVKLGLSSCVP---VANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVS 421

Query: 128 AYAHSGE------------------------GNAENVTEGFRL---FRSLRESITFTSRL 160
            Y H G                         G  +N  +G  L    R L  S       
Sbjct: 422 LYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAF 481

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI---------- 210
           T+  +L  C +   +   + +H Y L+ G+     +  AL++ Y+K G +          
Sbjct: 482 TVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQA 541

Query: 211 -----------------------REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
                                  ++A+ +FD M  RDV+ W  M+  Y +NG  +E   L
Sbjct: 542 VVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMEL 601

Query: 248 FVDLHRSGLCPDDESVQCVLGVIS-----DLGKR---------HEEQVQAYAIKLLLYNN 293
           F  +   G  P+  ++  VL   +     D GK+          E+ V      + +Y  
Sbjct: 602 FRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYAR 661

Query: 294 NSNVVL----------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           + +V L                W   +    Q G    A+  F  M+R  V+ D +T++ 
Sbjct: 662 SGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVG 721

Query: 338 ALAAVAGTDNLNLG-------QQIHGTTLKSGFYSAVI 368
            L+A A    ++ G       Q  HG   +   Y+ ++
Sbjct: 722 VLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  GK  H + + S Q     ++N ++T+Y+R GS+  ARR+FD++  R
Sbjct: 619 AVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR 678

Query: 118 -DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            + I+W S++ A A  G G    V     LF  +         +T   +L  C  +G+V 
Sbjct: 679 KETITWTSMIVAMAQHGLGEQAVV-----LFEEMVRVGVKPDHITYVGVLSACAHAGFVD 733

Query: 177 ASETVHGYAL-KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             +  +     + G+V        +V+++++ G + EA      M    D V+W  +L A
Sbjct: 734 KGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 227/771 (29%), Positives = 367/771 (47%), Gaps = 118/771 (15%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+   L+  Y+K G++  A+ +FD M + ++     +L A A                 S
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAH----------------S 92

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
            L PD E                         +L       + V +N  ++G+   G   
Sbjct: 93  RLVPDME-------------------------RLFASMPERDAVSYNALITGFSSTGSPA 127

Query: 315 GAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            +++ +  ++R  +V+   +T    +   +   +  LG  +H   L+ GF +   VG+ L
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187

Query: 374 INMYSKMGCVC-GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           ++MY+KMG +    R  Q   A  +   ++L  GL   K I                   
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIE------------------ 229

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
                      +A+ LF+     D  TW  M+ G   +    +AL++F  M   G  +D+
Sbjct: 230 -----------DAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T  + + ACG L   ++GKQ+HAY  ++ +E ++ V S ++DMY KC ++  A+++F  
Sbjct: 279 YTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRR 338

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +   + ++WT MI G   N   + A+  + +M++ G+ PD+FT   ++ + + L +LE+G
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
            Q H   +         V  +LV +Y KCG+IEDA+ LF +M   + V W A++ G AQ 
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF 458

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G  +ET+ LFE M  +G++PD VTFIGVLSACS  GLV +  + F  M++ + I P  +H
Sbjct: 459 GKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDH 518

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ ++D   R+GR KEA E I  MP    A     LL +CR++G+ E GKW AE L+  +
Sbjct: 519 YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETD 578

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------------- 831
           P + ++YVLL ++ AA  QW +V   R  M+ + VKK+P                     
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638

Query: 832 --ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP- 888
             +  I+ K+E L  ++ E GY PD   VL DV + +K   + +HSEKLA A+GLI  P 
Sbjct: 639 PFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQ 698

Query: 889 --PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
             P  ++                  ++ ++ L   A RFH   DG C C D
Sbjct: 699 EMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGD 749



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 129/598 (21%), Positives = 222/598 (37%), Gaps = 157/598 (26%)

Query: 74  STHARILNSS-QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           + H  IL +  Q P  FL N+L+T Y++ G L  ARR+FD+MPD +L + N++L+A AHS
Sbjct: 33  AVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHS 92

Query: 133 --------------------------GEGNAENVTEGFRLFRS-LRESITFTSRLTLAPL 165
                                     G  +  +     +L+R+ LRE     +R+TL+ +
Sbjct: 93  RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ---- 221
           + +  +        +VH   L++G     FV   LV++Y+K G IR+A+ +F  M+    
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 222 ---------------------------ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
                                      +RD + W  M+    +NG   E   +F  +   
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272

Query: 255 GLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN------------------- 294
           G+  D  +   +L     L    E +Q+ AY I    Y +N                   
Sbjct: 273 GVGIDQYTFGSILTACGALAASEEGKQIHAY-ITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 295 ----------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                      N++ W   + GY Q   +  A+  F  M    ++ D  T    +++ A 
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
             +L  G Q H   L SG    + V N+L+ +Y K G                    S+ 
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG--------------------SIE 431

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           +   L  ++  H        D    TAL+  Y + G   E                    
Sbjct: 432 DAHRLFDEMSFH--------DQVSWTALVTGYAQFGKAKE-------------------- 463

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
                       ++LF  M  +G + D +T    + AC    ++++G        K   +
Sbjct: 464 -----------TIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK---D 509

Query: 525 LDLCV----SSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            D+       + ++D+Y + G   +A+     +P +PD   W T++S C   G  ++ 
Sbjct: 510 HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 93/203 (45%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA I  +    + F+ + L+ MYS+C S+  A  +F +M  R++ISW +++  Y  
Sbjct: 297 GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY-- 354

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
              G      E  R F  ++         TL  ++  C +   +      H  AL  GL+
Sbjct: 355 ---GQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               VS ALV +Y K G I +A  LFD M   D V W  ++  YA+ G  +E   LF  +
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
             +GL PD  +   VL   S  G
Sbjct: 472 LVNGLKPDGVTFIGVLSACSRAG 494



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    + + L  G   H   L S  +    ++N L+T+Y +CGS+  A RLFD+M   
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SW +++  YA  G+       E   LF  +  +      +T   +L  C  +G V  
Sbjct: 444 DQVSWTALVTGYAQFGKAK-----ETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEK 498

Query: 178 SETVHGYALK---IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML 232
                    K   I  + D +    ++++YS+ G+ +EA+     M    D   W  +L
Sbjct: 499 GCDYFDSMQKDHDIVPIDDHYT--CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 192/545 (35%), Positives = 294/545 (53%), Gaps = 47/545 (8%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H H +++    D  +   L+++Y + GS+ EA  +FE     D  TW  +I GY   + 
Sbjct: 82  VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
              AL  F+ M   G   +E T+++ +KA         G Q+H + +K GF+ ++ V S 
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +LD+Y + G M DAQ +F+ + + +DV+W  +I+G       + AL ++  M   G  P 
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            F++A L  A S    LEQG+ +HA +IK       F G +L+DMYAK G+I DA  +F 
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           ++  R+ V WN++L   AQHG G+E +  FE+M+  G+ P+ ++F+ VL+ACS++GL+ E
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            +  + LM+ K GI PE  HY  +VD LGRAG    A   I  MP E +A++ +ALL AC
Sbjct: 382 GWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           R+  +TE G + AE +  L+P D   +V+L NI+A+  +W+D    R +MK   VKK+PA
Sbjct: 441 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 500

Query: 833 -----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                  + I  K E ++ +IKE GYVPDT  V++ V+++E+E 
Sbjct: 501 CSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREV 560

Query: 870 ALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFH 906
            L YHSEK+A A+ L++TPP S I   K                            NRFH
Sbjct: 561 NLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFH 620

Query: 907 HLRDG 911
           H +D 
Sbjct: 621 HFKDA 625



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 182/370 (49%), Gaps = 45/370 (12%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+ +H   L+S F   +++GN+L+NMY+K G +                           
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 384 ----C------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
               C            G   ++FTL+SV++A+++   G     Q+H   +K    ++  
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC-CGHQLHGFCVKCGFDSNVH 197

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V +AL+D+Y R G M +A+ +F+  +  +  +WNA+I G+   + + KALELF  M   G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R    + A+   AC     L+QGK +HAY +KSG +L     + +LDMY K G++ DA+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            IF+ +   D V+W ++++    +G    A+  + +MR  G+ P+E +F  ++ A S   
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAML 666
            L++G   +  + K     + +  +++VD+  + G++  A    ++M +  T  +W A+L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 667 VGLAQHGNGE 676
                H N E
Sbjct: 438 NACRMHKNTE 447



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 125/217 (57%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T +K C    +L QG+ +HA+ ++S F  D+ + + +L+MY KCG++ +A+ +F  +P  
Sbjct: 65  TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V WTT+ISG   +     AL  ++QM   G  P+EFT + ++KA++       G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
              +K    S+  VG +L+D+Y + G ++DA ++F  ++ RN V WNA++ G A+    E
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           + L+LF+ M   G  P   ++  +  ACS TG + + 
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 34/342 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ G+  HA IL S    D  + N L+ MY++CGSL  AR++F+KMP RD ++W ++++ 
Sbjct: 76  LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y+       +   +    F  +       +  TL+ ++K   +         +HG+ +K 
Sbjct: 136 YSQH-----DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G   +  V  AL+++Y+++G + +A+ +FD ++ R+ V W  ++  +A     E+   LF
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI----KLLLYNNNS-------- 295
             + R G  P   S   + G  S  G   + + V AY I    KL+ +  N+        
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310

Query: 296 ----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           +VV WN  L+ Y Q G    A+  F  M R  ++ + ++FL  L
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            A + +  L+ G   +    K G         +++++  + G
Sbjct: 371 TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 5/238 (2%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +LL F Q   F  S +     S+++ A +      G   H   +      +  + + L+ 
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           +Y+R G +  A+ +FD +  R+ +SWN+++A +A           +   LF+ +      
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS-----GTEKALELFQGMLRDGFR 259

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            S  + A L   C S+G++   + VH Y +K G     F    L+++Y+K G I +A+ +
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           FD + +RDVV W  +L AYA++GFG+E    F ++ R G+ P++ S   VL   S  G
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 161/436 (36%), Gaps = 93/436 (21%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LLK C     +     VH + L+     D  +   L+N+Y+K G + EA+ +F+ M +RD
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---EQV 281
            V W  ++  Y+++    +    F  + R G  P++ ++  V+   +   +R      Q+
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGCCGHQL 183

Query: 282 QAYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDN 313
             + +K             L LY                 + N V WN  ++G+ +    
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+E F  M+R   +    ++     A + T  L  G+ +H   +KSG       GN+L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++MY+K G +                        H +++I     K D V          
Sbjct: 304 LDMYAKSGSI------------------------HDARKIFDRLAKRDVV---------- 329

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
                                    +WN+++  Y       +A+  F  M   G R +EI
Sbjct: 330 -------------------------SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           +  + + AC    +L +G   +    K G   +      ++D+  + G +  A     ++
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424

Query: 554 P-APDDVAWTTMISGC 568
           P  P    W  +++ C
Sbjct: 425 PIEPTAAIWKALLNAC 440



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           S +  D   +  L+K  +    L QGR +HA++++     D  +G +L++MYAKCG++E+
Sbjct: 54  SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA--- 703
           A  +F++M  R+ V W  ++ G +QH    + L  F  M   G  P+  T   V+ A   
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173

Query: 704 -------------CSYTGLVSEAYENFHLMR--EKYGIEPEVE------------HYSFL 736
                        C   G  S  +    L+    +YG+  + +             ++ L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233

Query: 737 VDALGRAGRTKEAGELILSM---PFEASASMHRALLGACRVQGDTETGKWV-------AE 786
           +    R   T++A EL   M    F  S   + +L GAC   G  E GKWV        E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293

Query: 787 KLMAL 791
           KL+A 
Sbjct: 294 KLVAF 298


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 217/707 (30%), Positives = 352/707 (49%), Gaps = 111/707 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQ-- 352
           + VL N  +S Y +      A+  F +++ S +++ D  +F   L+A     N+++    
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCA 179

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           Q+H + LKSG   A+ V N+L+ +Y K                        PE    +++
Sbjct: 180 QLHCSVLKSGAGGALSVCNALVALYMK---------------------CESPEATRDARK 218

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSN 471
           + +  + N    D    T ++  Y R G +  A  +FE  DG FD+  WNAMI GY+ S 
Sbjct: 219 V-LDEMPNK---DDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDV-VWNAMISGYVHSG 273

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK--SGF--ELDL 527
            + +A ELF  M      LDE T  + + AC  + +   GK +H   ++    F  E  L
Sbjct: 274 MAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAAL 333

Query: 528 CVSSGILDMYVKCGAMVDAQSIFN-------------------------------DIPAP 556
            V++ ++  Y KCG +  A+ IF+                               ++P  
Sbjct: 334 PVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK 393

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           ++++W  M+SG V  G  + AL ++++MR   V P ++T+A  + A   L AL+ G+Q+H
Sbjct: 394 NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLH 453

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
            ++++L        G +L+ MYA+CG +++A+++F  M   ++V WNAM+  L QHG+G 
Sbjct: 454 GHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGR 513

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L+LF+ M A G+ PD ++F+ VL+AC+++GLV E +  F  M+  +GI P  +HY+ L
Sbjct: 514 EALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRL 573

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D LGRAGR  EA +LI +MPFE + S+  A+L  CR  GD E G   A++L  + P   
Sbjct: 574 IDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
             Y+LLSN ++AA  W D    R  M+ + VKK+P                       A 
Sbjct: 634 GTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAH 693

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            ++  +E +  ++++ GYVPDT  VL D+E  +KE  L+ HSE+LA  +GL++ PP + +
Sbjct: 694 EVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATV 753

Query: 894 LSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
              K     +                       RFHH +DG C C +
Sbjct: 754 TVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 800



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 85/438 (19%)

Query: 404 PEGLHLS-KQIHVHAIKNDTVADSFV---------STALIDVYCRNGSMAEAEYLFE--N 451
           P   HL+ + IH++ +  D  A + +         +T+L+  Y     +  A   F+   
Sbjct: 56  PPHPHLTLRLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVP 115

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCL--LML 508
               D    NA+I  Y  ++++  A+ +F  +  SG  R D+ +    + A G L  + +
Sbjct: 116 PARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISV 175

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---GAMVDAQSIFNDIPAPDDVAWTTMI 565
           +   Q+H   +KSG    L V + ++ +Y+KC    A  DA+ + +++P  DD+ WTTM+
Sbjct: 176 RHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMV 235

Query: 566 SGCVDNGEEDLALSIYHQ-------------------------------MRLSGVVPDEF 594
            G V  G+   A S++ +                               M L  V  DEF
Sbjct: 236 VGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEF 295

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYIL 650
           TF  ++ A + +     G+ +H  +I+L  +  P   +    +LV  Y+KCGNI  A  +
Sbjct: 296 TFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRI 355

Query: 651 FKQMDMRNTVLWNAMLVGLAQ------------------------------HGN-GEETL 679
           F  M +++ V WN +L G  +                              HG   E+ L
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           KLF  M++  V+P   T+ G ++AC   G +    +  H    + G E      + L+  
Sbjct: 416 KLFNKMRSENVKPCDYTYAGAIAACGELGALKHG-KQLHGHIVQLGFEGSNSAGNALITM 474

Query: 740 LGRAGRTKEAGELILSMP 757
             R G  KEA  + L MP
Sbjct: 475 YARCGAVKEAHLMFLVMP 492



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 30/226 (13%)

Query: 72  GKSTHARI--LNSSQIPDRFL--TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           GKS H +I  L  + +P+  L   N L+T YS+CG++  ARR+FD M  +D++SWN+IL+
Sbjct: 313 GKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILS 372

Query: 128 AYAHS--------------------------GEGNAENVTEGFRLFRSLRESITFTSRLT 161
            Y  S                          G  +     +  +LF  +R         T
Sbjct: 373 GYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYT 432

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A  +  C   G +   + +HG+ +++G         AL+ +Y++ G ++EA  +F  M 
Sbjct: 433 YAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP 492

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
             D V W  M+ A  ++G G E   LF  +   G+ PD  S   VL
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVL 538



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 69/328 (21%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++L+     D      ++  Y R G +  AR +F+++  +  + WN++++ Y HSG    
Sbjct: 218 KVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMA-- 275

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI--GLVWDEF 195
               E F LFR +          T   +L  C + G     ++VHG  +++    V +  
Sbjct: 276 ---VEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAA 332

Query: 196 --VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN--------------- 238
             V+ ALV  YSK G I  A+ +FD M  +DVV W  +L  Y E+               
Sbjct: 333 LPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392

Query: 239 ----------------GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQV 281
                           GF E+   LF  +    + P D +    +    +LG  +H +Q+
Sbjct: 393 KNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQL 452

Query: 282 QAYAIKLLLYNNNS----------------------------NVVLWNKKLSGYLQVGDN 313
             + ++L    +NS                            + V WN  +S   Q G  
Sbjct: 453 HGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHG 512

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAA 341
             A+E F  M+   +  D ++FL  L A
Sbjct: 513 REALELFDRMVAEGIYPDRISFLTVLTA 540



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 130/604 (21%), Positives = 211/604 (34%), Gaps = 179/604 (29%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
             +L+  Y+    L  A   FD +P   RD +  N++++AYA      A +      +FR
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYA-----RASHAAPAVAVFR 145

Query: 149 SLRES-------ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           SL  S        +FT+ L+    L     +  V     +H   LK G      V  ALV
Sbjct: 146 SLLASGSLRPDDYSFTALLSAGGHLP----NISVRHCAQLHCSVLKSGAGGALSVCNALV 201

Query: 202 NIYSKFGK---IREAKFLFDGMQERDV-------------------------------VL 227
            +Y K       R+A+ + D M  +D                                V+
Sbjct: 202 ALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVV 261

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAI 286
           W  M+  Y  +G   E F LF  +    +  D+ +   VL   +++G   H + V    I
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQII 321

Query: 287 KL---------LLYNNN-----------------------SNVVLWNKKLSGYLQ----- 309
           +L         L  NN                         +VV WN  LSGY++     
Sbjct: 322 RLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLD 381

Query: 310 ---------------------VGDNHG-----AIECFVNMIRSNVQYDSVTFLVALAAVA 343
                                 G  HG     A++ F  M   NV+    T+  A+AA  
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACG 441

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               L  G+Q+HG  ++ GF  +   GN+LI MY++ G V                    
Sbjct: 442 ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAV-------------------- 481

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
                  K+ H+  +    + DS    A+I    ++G   EA                  
Sbjct: 482 -------KEAHLMFLVMPNI-DSVSWNAMISALGQHGHGREA------------------ 515

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
                        LELF  M   G   D I+  T + AC    ++ +G + +  +MK  F
Sbjct: 516 -------------LELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFR-YFESMKRDF 561

Query: 524 ELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
            +       + ++D+  + G + +A+ +   +P  P    W  ++SGC  +G+ +L    
Sbjct: 562 GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHA 621

Query: 581 YHQM 584
             Q+
Sbjct: 622 ADQL 625


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 242/854 (28%), Positives = 401/854 (46%), Gaps = 133/854 (15%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   +K+G   D F+S  L+++Y K   + EA+ LFD M  RDV  W +++ AY + G 
Sbjct: 37  IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAY--------------- 284
            EE   LF  +  SG  P++ ++   L   S L +  H  + QA                
Sbjct: 97  HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSA 156

Query: 285 -------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                        A ++  Y NN ++V W   +S +++ G    A++ +  MI++ V  +
Sbjct: 157 LIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPN 216

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------- 383
             TF V L A +    LN G+ +H   +       +++  +L++MY K   +        
Sbjct: 217 EFTF-VKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSK 275

Query: 384 -----------------------------------CGLRTDQFTLASVLRASSSLPEGLH 408
                                               G+  + FT + +L A SS+   L 
Sbjct: 276 LTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSIL-ALD 334

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE-AEYLFENKDGFDLATWNAMIFGY 467
           L KQIH   +      D  V  +L+D+Y +  +M E A   F      ++ +W ++I G+
Sbjct: 335 LGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGF 394

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
                  +++++F  M   G R +  T++T + ACG +  L Q +++H Y +K+  + D+
Sbjct: 395 SEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDV 454

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V + ++D Y   G + DA  + + +   D + +T++ +     G  ++AL+I   M   
Sbjct: 455 VVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKD 514

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
            V  D F+ A  + A++ +  +E G+Q+H   +K    S   V   LVD+Y KCG I DA
Sbjct: 515 DVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDA 574

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
           +  F ++   + V WN ++ GLA +G+    L  FEDM+  GVEPD +T + VL ACS+ 
Sbjct: 575 HRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHG 634

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV    + F  MREK+GI P+++HY  LVD LGRAGR +EA  +I +MPF+  A +++ 
Sbjct: 635 GLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKT 694

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LLGAC++ G+   G+ +A + + L+P D + YVLL+N++  + + +     R  M+ + V
Sbjct: 695 LLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGV 754

Query: 828 KKDPAD-----------------------LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           +K+P                          I  K+E LI + +  G              
Sbjct: 755 RKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQGI------------W 802

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY-- 901
            ++ RAL +HSEKLA A+GLISTPP + I                     L ++E +   
Sbjct: 803 YQENRALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRD 862

Query: 902 ANRFHHLRDGMCPC 915
            NRFH  + G C C
Sbjct: 863 GNRFHSFKKGECSC 876


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 214/606 (35%), Positives = 312/606 (51%), Gaps = 74/606 (12%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMA 443
           G+R D  T AS L A S L E L + +++H   +K+D +A +SFV++AL+D+Y  N  ++
Sbjct: 255 GVRPDGVTFASALPACSRL-ELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVS 313

Query: 444 EAEYLFE--NKDGFDLATWNAMIFGYILSNN-SHKALELFSHMHT-SGERLDEITIATAV 499
            A  +F+   + G  L  WNAMI GY        +A+ELFS M   +G    E T+A  +
Sbjct: 314 HARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVL 373

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
            AC    +    + +H Y +K     +  V + ++DMY + G M +A +IF  I   D V
Sbjct: 374 PACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIV 433

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSG--------------------VVPDEFTFAIL 599
           +W T+I+GC+  G    A  +  +M+L                       +P+  T   L
Sbjct: 434 SWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTL 493

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           +   + L A  +G++IH   ++    SD  VG +LVDMYAKCG +  A  +F ++  RN 
Sbjct: 494 LPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNV 553

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFH 718
           + WN +++    HG G+E L LF+ M A+G   P+ VTFI  L+ACS++GLV    E F 
Sbjct: 554 ITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQ 613

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM-PFEASASMHRALLGACRVQGD 777
            M+  YG EP    ++ +VD LGRAGR  EA  +I SM P E   S    +LGACR+  +
Sbjct: 614 GMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRN 673

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------ 831
            + G+  AE+L  LEP ++S YVLL NI++AA  W++ T  RG M+++ V K+P      
Sbjct: 674 VKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIE 733

Query: 832 -----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                            +  + A ++ L +R++  GYVPDT  VL DV+E EK   L YH
Sbjct: 734 LDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYH 793

Query: 875 SEKLARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRDG 911
           SEKLA A+GL+  PP + I   K     N                       RFHH RDG
Sbjct: 794 SEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDG 853

Query: 912 MCPCAD 917
            C C D
Sbjct: 854 TCSCGD 859



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 194/409 (47%), Gaps = 30/409 (7%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV--ADSFVSTALIDVYCRNGSMAEAE 446
           D F L   ++++++L +    ++ IH  +++   +      VS AL+  Y R G +  A 
Sbjct: 47  DHFALPPAIKSAAALRDS-RSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAAL 105

Query: 447 YLFEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
            LF     D  D  ++N++I    L      AL+    M    E +   T+ + + AC  
Sbjct: 106 ALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHE-VSSFTLVSVLLACSH 164

Query: 505 LLML--KQGKQMHAYAMKSGFELDLCVS----SGILDMYVKCGAMVDAQSIF--NDIPAP 556
           L     + G++ HA+A+K GF LD        + +L MY + G + DAQ +F  +     
Sbjct: 165 LADQGHRLGREAHAFALKHGF-LDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVG 223

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V W TMIS  V  G  + A+ + + M   GV PD  TFA  + A S L  L  GR++H
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVH 283

Query: 617 ANLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHG 673
           A ++K  D +++ FV  +LVDMYA    +  A  +F  +    R   +WNAM+ G AQHG
Sbjct: 284 AFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG 343

Query: 674 N-GEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
              EE ++LF  M+A  G  P   T  GVL AC+ + + +   E  H     Y ++ ++ 
Sbjct: 344 GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFT-GKEAVH----GYVVKRDMA 398

Query: 732 HYSF----LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
              F    L+D   R GR  EA  +   +      S +  L+  C VQG
Sbjct: 399 SNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWN-TLITGCIVQG 446



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 155/639 (24%), Positives = 261/639 (40%), Gaps = 147/639 (23%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEG 143
           P   ++N L+T Y+RCG L  A  LF   P   RD +S+NS+++A               
Sbjct: 83  PTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALC------------- 129

Query: 144 FRLFR-------SLRESIT--FTSRLTLAPLLKLC---LSSGYVWASETVHGYALKIGLV 191
             LFR       +LR+ +     S  TL  +L  C      G+    E  H +ALK G +
Sbjct: 130 --LFRRWGHALDALRDMLADHEVSSFTLVSVLLACSHLADQGHRLGREA-HAFALKHGFL 186

Query: 192 ---WDEFVSGALVNIYSKFGKIREAKFLF--DGMQERDVVLWKVMLRAYAENGFGEEVFH 246
               + F   AL+++Y++ G + +A+ LF   G    D+V W  M+    + G  EE   
Sbjct: 187 DKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQ 246

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIK-------------- 287
           +  D+   G+ PD  +    L   S L     G+    +V A+ +K              
Sbjct: 247 VLYDMVALGVRPDGVTFASALPACSRLELLGVGR----EVHAFVLKDDDLAANSFVASAL 302

Query: 288 LLLYNNNSNVV-----------------LWNKKLSGYLQVGD-NHGAIECFVNM-IRSNV 328
           + +Y +N  V                  +WN  + GY Q G  +  AIE F  M   +  
Sbjct: 303 VDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGC 362

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-------- 380
                T    L A A ++     + +HG  +K    S   V N+L++MY+++        
Sbjct: 363 APSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHT 422

Query: 381 ------------------GCVC-GLRTDQFTLASVLRASSS------------------- 402
                             GC+  GL ++ F L   ++  SS                   
Sbjct: 423 IFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQR 482

Query: 403 -LPEGLHL---------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
            +P  + L                K+IH +A+++   +D  V +AL+D+Y + G +A A 
Sbjct: 483 CMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALAR 542

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCL 505
            +F+     ++ TWN +I  Y +     +AL LF  M  +GE   +E+T   A+ AC   
Sbjct: 543 AVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHS 602

Query: 506 LMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFNDI-PAPDDV-AW 561
            ++ +G ++    MK   GFE    + + ++D+  + G + +A  I + + P    V AW
Sbjct: 603 GLVDRGLELF-QGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAW 661

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           +TM+  C      ++ L      RL  + PDE +  +L+
Sbjct: 662 STMLGAC--RLHRNVKLGRIAAERLFELEPDEASHYVLL 698



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 159/374 (42%), Gaps = 58/374 (15%)

Query: 63  AISTSDLL-LGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RD 118
           A S  +LL +G+  HA +L    +  + F+ + L+ MY+    + +ARR+FD +P+  R 
Sbjct: 269 ACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQ 328

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L  WN+++  YA  G G  E   E F   R   E+    S  T+A +L  C  S      
Sbjct: 329 LGMWNAMICGYAQHG-GMDEEAIELFS--RMEAEAGCAPSETTMAGVLPACARSEVFTGK 385

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E VHGY +K  +  + FV  AL+++Y++ G++ EA  +F  +  RD+V W  ++      
Sbjct: 386 EAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQ 445

Query: 239 GFGEEVFHLFVDLH--------RSGLCPDDESV---QCVLGVISDL----------GKRH 277
           G   E F L  ++          + L  DD SV   +C+   I+ +              
Sbjct: 446 GLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPAR 505

Query: 278 EEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQ 309
            +++  YA++  L ++                              NV+ WN  +  Y  
Sbjct: 506 GKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGM 565

Query: 310 VGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQI-HGTTLKSGFYSAV 367
            G    A+  F  M+       + VTF+ ALAA + +  ++ G ++  G     GF    
Sbjct: 566 HGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTP 625

Query: 368 IVGNSLINMYSKMG 381
            +   ++++  + G
Sbjct: 626 YLHACVVDVLGRAG 639


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 215/669 (32%), Positives = 331/669 (49%), Gaps = 76/669 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N   W+  +  Y+Q      A+E +  M+R  +  D+ T    LAA     ++  G+ + 
Sbjct: 12  NAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMVQ 71

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
               + GF   V+V  SLI++++K GC+           SV R+  ++            
Sbjct: 72  RKAEELGFEKDVVVATSLIHLFAKCGCL-------EEAESVFRSMGAMR----------- 113

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                    D    TA+I  YC  GS+ +++ LF   D  D+ +WNAMI  Y L  +   
Sbjct: 114 ---------DIISVTAMIGAYC--GSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKD 162

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A  LF  M T G   D  T ++ + AC     L+ G+ +H      GF+ D  + + ++ 
Sbjct: 163 AFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLIS 222

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY +CG++  A+  F  I   +  AW TM++      +   AL +Y  M L G  PD FT
Sbjct: 223 MYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFT 282

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ +V + + L AL +G+ IH          D  +G +LV+MYAKCG++ DA   F  + 
Sbjct: 283 FSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGIS 342

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V W+AM+   AQHG+ EE L+L   M   G+  + VT   VL ACS+ G + E  +
Sbjct: 343 NKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGID 402

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  + + +GIE + E+    +D LGRAG  KEA  ++ +MPF+ S      LLG C+V 
Sbjct: 403 YFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVH 462

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK------ 829
           GD   GK   ++++ALEP +  +YVLL+N++AAA +WDDV   R  M++K VK+      
Sbjct: 463 GDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSS 522

Query: 830 ----------------DPADL-IFAKVEGLIKRIK-EGGYVPDTDFVLLDVEEEEKERAL 871
                           +P +L I A++E L  R+K E GYVPDT  V  DV +++KE  L
Sbjct: 523 IEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELL 582

Query: 872 YYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHL 908
            +HSEK+A  +GLI++PP S +                     ++ +  +     RFHH 
Sbjct: 583 KFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHF 642

Query: 909 RDGMCPCAD 917
             G+C C D
Sbjct: 643 EGGICSCGD 651



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 221/487 (45%), Gaps = 48/487 (9%)

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+ +FD +++R+   W +++  Y +N   +E   ++ ++ R  +  D  ++  VL   + 
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 273 LGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
           L    E   VQ  A +L       +VV+    +  + + G    A   F +M       D
Sbjct: 61  LLDVEEGRMVQRKAEELGF---EKDVVVATSLIHLFAKCGCLEEAESVFRSM---GAMRD 114

Query: 332 SVTFLVALAAVAGT--DNLNLGQQIHGTTLKSGFYSAVIVGNSL-------INMYSKMGC 382
            ++    + A  G+  D+ +L   +    + S  ++A+I   +L        +++ +M C
Sbjct: 115 IISVTAMIGAYCGSLKDSKSLFLTMDVKDVVS--WNAMIAAYTLYGHDKDAFSLFHRM-C 171

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             G   D +T +S+L A +S P+ L   + +HV         D  +   LI +Y R GS+
Sbjct: 172 TLGHTPDIYTFSSILGACAS-PKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSL 230

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A   F + +  +L  WN M+  Y   +    AL L+ +M   G   D  T ++ V +C
Sbjct: 231 ESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSC 290

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             L  L++GK +H  +   GFE D+ + + +++MY KCG++ DA+  F+ I   D V+W+
Sbjct: 291 ASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWS 350

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            MI+    +G  + AL + H M L G+  +E T      ASS L A   G +++  +   
Sbjct: 351 AMIAASAQHGHAEEALELSHLMNLQGIAQNEVT------ASSVLHACSHGGRLYEGI--- 401

Query: 623 DCSSDPFVGIS--------------LVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLV 667
               D F+G+S               +D+  + G +++A  +   M  + + V    +L 
Sbjct: 402 ----DYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLG 457

Query: 668 GLAQHGN 674
           G   HG+
Sbjct: 458 GCKVHGD 464



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 5/221 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    S   L  G+  H RI       D  + NNL++MY+RCGSL  ARR F  +  +
Sbjct: 184 SILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKK 243

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L +WN++LAAYA   +G      +   L++++        R T + ++  C S G +  
Sbjct: 244 ELGAWNTMLAAYAQFDKGK-----DALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 298

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  +   G   D  +  ALVN+Y+K G + +AK  FDG+  +DVV W  M+ A A+
Sbjct: 299 GKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQ 358

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +G  EE   L   ++  G+  ++ +   VL   S  G+ +E
Sbjct: 359 HGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYE 399



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 154/394 (39%), Gaps = 79/394 (20%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPL 165
           AR++FD++  R+  SW+ ++  Y  +         E   +++ + RE I+  +  TL+ +
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNA-----MYQEALEVYKEMVREEISIDA-YTLSSV 54

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA------------ 213
           L  C     V     V   A ++G   D  V+ +L+++++K G + EA            
Sbjct: 55  LAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRD 114

Query: 214 ------------------KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
                             K LF  M  +DVV W  M+ AY   G  ++ F LF  +   G
Sbjct: 115 IISVTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLG 174

Query: 256 LCPDDESVQCVLGVISDLGKRHEE--------QVQAYAIKLLLYNN-------------- 293
             PD  +   +LG  +   KR E+          + +     + NN              
Sbjct: 175 HTPDIYTFSSILGACAS-PKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESA 233

Query: 294 --------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
                      +  WN  L+ Y Q      A+  + NM+      D  TF   + + A  
Sbjct: 234 RRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASL 293

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR--------TDQFTLASVL 397
             L  G+ IH  +   GF   VI+G +L+NMY+K G +   +         D  + ++++
Sbjct: 294 GALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMI 353

Query: 398 RASSS---LPEGLHLSKQIHVHAIKNDTVADSFV 428
            AS+      E L LS  +++  I  + V  S V
Sbjct: 354 AASAQHGHAEEALELSHLMNLQGIAQNEVTASSV 387



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+ +F+ I   +  +W+ ++   V N     AL +Y +M    +  D +T + ++ A + 
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ------------ 653
           L  +E+GR +     +L    D  V  SL+ ++AKCG +E+A  +F+             
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 654 ------------------MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
                             MD+++ V WNAM+     +G+ ++   LF  M   G  PD  
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 696 TFIGVLSACS 705
           TF  +L AC+
Sbjct: 181 TFSSILGACA 190



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 5/178 (2%)

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CGSL  ++ LF  M  +D++SWN+++AAY   G        + F LF  +          
Sbjct: 126 CGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDK-----DAFSLFHRMCTLGHTPDIY 180

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T + +L  C S   +     +H      G   D  +   L+++Y++ G +  A+  F  +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +++++  W  ML AYA+   G++   L+ ++   G  PD  +   V+   + LG   E
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 298


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 250/864 (28%), Positives = 412/864 (47%), Gaps = 130/864 (15%)

Query: 181 VHGYALKIGLVWDE---FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +H +A+  G + D+   F++  L+ +Y K G++ +A  LFDGM  R V  W  ++ A   
Sbjct: 77  LHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLS 136

Query: 238 NGFGEEVFHLFVDLHRS----GLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK----- 287
           +G   E   ++  +  S    G  PD  ++  VL      G  R   +V   A+K     
Sbjct: 137 SGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDR 196

Query: 288 -LLLYN-----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
             L+ N                       +  +V  WN  +SG +Q G    A++ F  M
Sbjct: 197 STLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRM 256

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
                  +S T +  L   A    LN G+++H   LK G     I  N+L+ MY++ G V
Sbjct: 257 QSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCG-TEFNIQCNALLVMYARCGWV 315

Query: 384 -----------------------C--------------------GLRTDQFTLASVLRAS 400
                                  C                    G   D   + S+L A 
Sbjct: 316 DSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAV 375

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             L   ++  +++H +A+K    +D  ++  L+D+Y +  S+  +  +F+     D  +W
Sbjct: 376 GHLGRLIN-GREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSW 434

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
             +I  Y  S+   +A+  F      G ++D + + + ++AC  L  +   KQ+H+YA++
Sbjct: 435 TTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIR 494

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +G  LDL + + I+D+Y +CG +  A +IF  +   D V WT+M++   +NG    A+++
Sbjct: 495 NGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVAL 553

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           + +M  +G+ PD      ++ A + L++L +G++IH  LI+     +  V  SLVDMY+ 
Sbjct: 554 FGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSG 613

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG++  A  +F +   ++ VLW AM+     HG+G++ + +F+ M   GV PD V+F+ +
Sbjct: 614 CGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLAL 673

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           L ACS++ LV E      +M  KY ++P  EHY+ +VD LGR+G+T+EA + I SMP E 
Sbjct: 674 LYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEP 733

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            + +  ALLGACR+  + E      +KL+ LEP +   YVL+SN+FA   +W++V   R 
Sbjct: 734 KSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRT 793

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI-KEGGYVPDTD 856
           +M  + ++KDPA                         I  K+  + +++ +EG YV DT 
Sbjct: 794 KMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTS 853

Query: 857 FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LS 895
           FVL DV EEEK   L+ HSE+LA ++GLIST   + +                     L 
Sbjct: 854 FVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLF 913

Query: 896 NKEPLY--ANRFHHLRDGMCPCAD 917
            +E +   ANRFHH   G C C D
Sbjct: 914 EREIVVRDANRFHHFSGGTCSCGD 937



 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 193/718 (26%), Positives = 321/718 (44%), Gaps = 99/718 (13%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDR---FLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +R A+S      G+  HA  + +  + D    FL   L+ MY +CG L  A RLFD MP 
Sbjct: 67  VRRAVSE-----GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPA 121

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR----LTLAPLLKLCLSS 172
           R + SWN+++ A   SG        E   ++R++R S           TLA +LK C + 
Sbjct: 122 RTVFSWNALIGACLSSG-----GAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAE 176

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVM 231
           G       VHG A+K GL     V+ ALV +Y+K G +  A  +F+ M++ RDV  W   
Sbjct: 177 GDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSA 236

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK--- 287
           +    +NG   E   LF  +   G   +  +   VL V ++L +  H  ++ A  +K   
Sbjct: 237 ISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGT 296

Query: 288 ---------LLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                    L++Y                 + + + WN  LS Y+Q      AI+ F  M
Sbjct: 297 EFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEM 356

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK---- 379
           +++    D    +  L+AV     L  G+++H   +K    S + + N+L++MY K    
Sbjct: 357 VQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSV 416

Query: 380 ---------------------MGCVC------------------GLRTDQFTLASVLRAS 400
                                + C                    G++ D   + S+L A 
Sbjct: 417 ECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEAC 476

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           S L + + L KQ+H +AI+N  + D  +   +ID+Y   G +  A  +FE  D  D+ TW
Sbjct: 477 SGL-KSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTW 534

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            +M+  +  +   H+A+ LF  M  +G + D + +   + A   L  L +GK++H + ++
Sbjct: 535 TSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR 594

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
             F ++  V S ++DMY  CG+M  A  +F++    D V WT MI+    +G    A+ I
Sbjct: 595 GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYI 654

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVDM 637
           + +M  +GV PD  +F  L+ A S    +++G+    +  +  KL    + +  +  VD+
Sbjct: 655 FKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACV--VDL 712

Query: 638 YAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
             + G  E+AY   K M +   +V+W A+L     H N E  L +    K   +EPD+
Sbjct: 713 LGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHE--LAMIATDKLLELEPDN 768



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 133/600 (22%), Positives = 242/600 (40%), Gaps = 91/600 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           S+L+   +  D   G   H   + S       + N L+ MY++CG L  A R+F+ M D 
Sbjct: 168 SVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDG 227

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RD+ SWNS ++    +G        E   LFR ++      +  T   +L++C     + 
Sbjct: 228 RDVASWNSAISGCVQNG-----MFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLN 282

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +H   LK G  ++     AL+ +Y++ G +  A  +F  + ++D + W  ML  Y 
Sbjct: 283 HGRELHAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYV 341

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIK------LL 289
           +N    E    F ++ ++G  PD   +  +L  +  LG+  +  +V AYA+K      L 
Sbjct: 342 QNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQ 401

Query: 290 LYNNNSNV----------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           + N   ++                      V W   ++ Y Q      AI  F    +  
Sbjct: 402 IANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEG 461

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--- 384
           ++ D +     L A +G  +++L +Q+H   +++G    +I+ N +I++Y + G VC   
Sbjct: 462 IKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCYAL 520

Query: 385 ----------------------------------------GLRTDQFTLASVLRASSSLP 404
                                                   G++ D   L  +L A + L 
Sbjct: 521 NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLS 580

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             L   K+IH   I+     +  V ++L+D+Y   GSM  A  +F+     D+  W AMI
Sbjct: 581 S-LTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMI 639

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-----QMHAYAM 519
               +  +  +A+ +F  M  +G   D ++    + AC    ++ +GK      +  Y +
Sbjct: 640 NATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKL 699

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLAL 578
           +   E   CV    +D+  + G   +A      +P  P  V W  ++  C  +   +LA+
Sbjct: 700 QPWQEHYACV----VDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAM 755



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 9/238 (3%)

Query: 508 LKQGKQMHAYAMKSGFELD---LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           + +G+Q+HA+A+ +G   D     +++ +L MY KCG + DA  +F+ +PA    +W  +
Sbjct: 71  VSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNAL 130

Query: 565 ISGCVDNGEEDLALSIYHQMRLS----GVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           I  C+ +G    A+ +Y  MR S    G  PD  T A ++KA         G ++H   +
Sbjct: 131 IGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAV 190

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETL 679
           K        V  +LV MYAKCG ++ A  +F+ M D R+   WN+ + G  Q+G   E L
Sbjct: 191 KSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEAL 250

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            LF  M++ G   +S T +GVL  C+    ++   E  H    K G E  ++  + LV
Sbjct: 251 DLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRE-LHAALLKCGTEFNIQCNALLV 307



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 166/375 (44%), Gaps = 36/375 (9%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L L   +Q   FS +S ++    +L+     + L  G+  HA +L           N L
Sbjct: 249 ALDLFRRMQSDGFSMNSYTT--VGVLQVCAELAQLNHGRELHAALLKCG-TEFNIQCNAL 305

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY+RCG +  A R+F ++ D+D ISWNS+L+ Y  +         E    F  + ++ 
Sbjct: 306 LVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQN-----RLYAEAIDFFGEMVQNG 360

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                  +  LL      G +     VH YA+K  L  D  ++  L+++Y K   +  + 
Sbjct: 361 FNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSA 420

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M+ +D V W  ++  YA++    E    F    + G+  D   +  +L   S L 
Sbjct: 421 RVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLK 480

Query: 275 K-RHEEQVQAYAIK-----LLLYN----------------------NNSNVVLWNKKLSG 306
                +QV +YAI+     L+L N                      +  ++V W   ++ 
Sbjct: 481 SISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNC 540

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           + + G  H A+  F  M+ + +Q DSV  +  L A+AG  +L  G++IHG  ++  F   
Sbjct: 541 FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 600

Query: 367 VIVGNSLINMYSKMG 381
             V +SL++MYS  G
Sbjct: 601 GAVVSSLVDMYSGCG 615



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 608 ALEQGRQIHANLIKLDCSSDP---FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
           A+ +GRQ+HA+ +      D    F+   L+ MY KCG + DA+ LF  M  R    WNA
Sbjct: 70  AVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNA 129

Query: 665 MLVGLAQHGNGEETLKLFEDMKAH----GVEPDSVTFIGVLSACSYTG 708
           ++      G   E + ++  M+A     G  PD  T   VL AC   G
Sbjct: 130 LIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEG 177


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 257/882 (29%), Positives = 393/882 (44%), Gaps = 149/882 (16%)

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG-YALKIGLVWDEFVSGALV 201
           G RL+R    +   T  + LA LL+ C  +G +     +H    L        F++  L+
Sbjct: 6   GQRLWRPPAPAAATT--VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 63

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD-- 259
            +YS    +  A  LF  M  R+ V W  ++   ++N    +    F  + R+G+ P   
Sbjct: 64  TMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRL 123

Query: 260 --DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
             +      LG    L   H        +K            W ++L             
Sbjct: 124 IYETKFHNTLGPKHTLAASHCHSGPTLMVKY-----------WGQRL------------- 159

Query: 318 ECFVNMIRSNVQYDSVTFLVA--LAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLI 374
                  R      + T  +A  L +     +L  G+ +H   + SG  +A   + N LI
Sbjct: 160 ------WRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 213

Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLPEG----------------LHLSKQIHVHAI 418
            MYS              LAS LR  +++P                  +H        A+
Sbjct: 214 TMYSHCA----------DLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAM 263

Query: 419 KNDTVADS-----------------------------------FVSTALIDVYCRNGSMA 443
           +   VA +                                   FV++ L D+Y + G ++
Sbjct: 264 RRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCGLLS 323

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG-ERLDEITIATAVKAC 502
           EA  +F+     D   W AMI GY  + +   A+  F  M   G    D+    + + A 
Sbjct: 324 EACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS 383

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAW 561
           G L      K +H    K+GFEL++ V + ++DMY K   +  A  +    P   + V+ 
Sbjct: 384 GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSG 443

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T+MI G ++    + AL IY ++R  GV P+EFTF+ ++K  +    LEQG Q+HA +IK
Sbjct: 444 TSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK 503

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
            D   D FVG +LVDMY KCG I  +  LF +++ R  + WNA++   AQHG+G E ++ 
Sbjct: 504 TDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQA 563

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F+ M   G+ P+ + F+ +L+ACS+ GLV E  + F+ M+E +GIEP+ EHYS ++D  G
Sbjct: 564 FDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYG 623

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAGR  EA + I  MP + +A    +LLGACR++G  E G+  A+ LM LEP ++  +V 
Sbjct: 624 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS 683

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LS I+A+  QW+DV + R  M+   +KK P                          I+ K
Sbjct: 684 LSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEK 743

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           +E L  RIKE GY+PDT F+  ++E+  KER L YHSE++A A+ LIS P +  I+  K 
Sbjct: 744 LEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKN 803

Query: 899 PLYA-----------------------NRFHHLRDGMCPCAD 917
                                      +RFHH  +G C C D
Sbjct: 804 LRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGD 845



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 149/643 (23%), Positives = 252/643 (39%), Gaps = 129/643 (20%)

Query: 58  SILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           S+L+      DL  G+  HAR +L+ +     FL N+L+TMYS C  L  A RLF  MP 
Sbjct: 25  SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84

Query: 117 RDLISWNSIL----------------------------------------------AAYA 130
           R+ +SW +++                                              A++ 
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHC 144

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG-YALKIG 189
           HSG         G RL+R    +   T  + LA LL+ C  +G +     +H    L   
Sbjct: 145 HSGPTLMVKYW-GQRLWRPPAPAAATT--VHLASLLQSCGRAGDLRRGRLLHARLVLSGA 201

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
                F++  L+ +YS    +  A  LF  M  R+ V W  ++   ++N    +    F 
Sbjct: 202 AAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFA 261

Query: 250 DLHRSGLCPDD-----------------ESVQCV----------LGVISDLGKRHEE-QV 281
            + R+G+ P                    +  C           L V S+L   + +  +
Sbjct: 262 AMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCGL 321

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALA 340
            + A ++       + V W   + GY + G    A+  F +M R   V  D   F   L+
Sbjct: 322 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 381

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------- 379
           A  G  +  L + IH    K+GF   V V N+LI+MY+K                     
Sbjct: 382 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVV 441

Query: 380 -----------MGCV------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                        CV             G+  ++FT +S+++   ++   L    Q+H  
Sbjct: 442 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKG-CAMQALLEQGAQLHAQ 500

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            IK D + DSFV + L+D+Y + G ++ +  LF   +      WNA+I  +    +  +A
Sbjct: 501 VIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREA 560

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGIL 534
           ++ F  M  SG R + I   + + AC    ++ +G + + Y+MK   G E      S I+
Sbjct: 561 IQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLK-YFYSMKEAHGIEPKEEHYSCII 619

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDL 576
           D Y + G + +A    +++P  P+   W +++  C   G ++L
Sbjct: 620 DTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKEL 662


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 224/785 (28%), Positives = 382/785 (48%), Gaps = 80/785 (10%)

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           WNSI+    H+   N   +   +    SL   IT  S  T+  +LK C     +     +
Sbjct: 28  WNSIIKH--HTKLKNDHAILSTYTQMESL--GITPDSA-TMPLVLKACGRLNAIGNGVRI 82

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H +   + L+ D  V  ALV+ Y K G + EA  +F  M ERD+V W  ++  Y      
Sbjct: 83  HSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCY 142

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNNS----- 295
           +E   LFV++ ++GL P+  +V  +L    + L  R  +++  Y ++  L++ ++     
Sbjct: 143 KEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202

Query: 296 -----------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                                  N+V WN  ++G+L VGD   A++ + +M+   +++D+
Sbjct: 203 LVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDA 262

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG------- 385
           VT LV + A A    L LG Q+H   +K    + + + N+L+NMYS  G +         
Sbjct: 263 VTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNA 322

Query: 386 ------------------------------------LRTDQFTLASVLRASSSLPEGLHL 409
                                               ++ D  T+A +L   + L +G   
Sbjct: 323 VPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW 382

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            + +H HA+K+    D+++  AL+ +Y ++  +  A+Y+FE   G D+ +WN MI  +  
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ 442

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S    KA ELF  M  S  + +  TI + +  C     L  G+ +H +A+K+G E++  +
Sbjct: 443 SMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSL 502

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           ++ + +MY+ CG    A ++F   P  D V+W ++IS  + N     AL +++ M +S +
Sbjct: 503 NTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISEL 561

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS--SDPFVGISLVDMYAKCGNIEDA 647
            P+  T   ++ + + L  L  G+ +HA   + + S   D  +  + + MYA+CG ++ A
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F  +  R+ V WNAM+ G   HG G +    F  M   G +P++V+F  VLSACS++
Sbjct: 622 EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHS 681

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GL     + FH M   +GI P++ HY  +VD LGR G   EA   I SMP E  AS+ RA
Sbjct: 682 GLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRA 741

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL +C+++ + +  + +  KL+ LEP +   ++LLSNI+AAA  W +V   R  ++ + +
Sbjct: 742 LLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGL 801

Query: 828 KKDPA 832
            K P 
Sbjct: 802 GKPPG 806



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 225/563 (39%), Gaps = 125/563 (22%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG   H   +  + I D F+ N L+ MYS  GSL  +  LF+ +P  D   WNS++++
Sbjct: 278 LRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISS 337

Query: 129 YAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC--LSSGYVWASETVHGYA 185
           Y   G        E   LF  +R E I    R T+A +L LC  L+ G +W    +H +A
Sbjct: 338 YIGFGFH-----AEAIALFIKMRLERIKEDVR-TIAIMLSLCNDLNDGSIWG-RGLHAHA 390

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G+  D ++  AL+++Y K  +I  A+++F+ M+  DV+ W  M+ A+A++ F  + F
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLLLYNNNS----- 295
            LF+ +  S +  +  ++  +L    D      G+     +  +AIK  L  N S     
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGR----SIHGFAIKNGLEINTSLNTSL 506

Query: 296 -----------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                                  ++V WN  +S Y++  DN G      N + S ++ +S
Sbjct: 507 TEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIK-NDNAGKALLLFNHMISELEPNS 565

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKS--GFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           VT +  L +     +L LGQ +H  T +          + N+ I MY++ G         
Sbjct: 566 VTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCG--------- 616

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLF 449
                               K  +   I       S VS  A+I  Y  +G   +A   F
Sbjct: 617 --------------------KLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAF 656

Query: 450 EN--KDGFDLATWNAMIFGYILSNNSHK-----ALELFSHMHTSGERLDEITIATAVKAC 502
                DGF     N + F  +LS  SH       L+LF  M      + +  IA  +   
Sbjct: 657 AQMLDDGFKP---NNVSFASVLSACSHSGLTVTGLQLFHSM------VRDFGIAPQLTHY 707

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAW 561
           GC+                            +D+  + G   +A +  N +P  PD   W
Sbjct: 708 GCM----------------------------VDLLGRGGHFSEAIAFINSMPIEPDASIW 739

Query: 562 TTMISGCVDNGEEDLALSIYHQM 584
             ++S C       L  +I+ ++
Sbjct: 740 RALLSSCQIKSNNKLLETIFGKL 762



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 13/258 (5%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           + S+F +  +R   +F L L+    +  F+S +      S+L      SDL+ G+S H  
Sbjct: 436 MISAFAQSMFRA-KAFELFLMMCESEIKFNSYTI----VSLLAFCKDGSDLVFGRSIHGF 490

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
            + +    +  L  +L  MY  CG    A  +F + P RDL+SWNS++++Y  +     +
Sbjct: 491 AIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKN-----D 545

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--IGLVWDEFV 196
           N  +   LF  +   +   S +T+  +L  C    ++   + +H Y  +  + L  D  +
Sbjct: 546 NAGKALLLFNHMISELEPNS-VTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASL 604

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + A + +Y++ GK++ A+ +F  +Q R +V W  M+  Y  +G G +    F  +   G 
Sbjct: 605 ANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGF 664

Query: 257 CPDDESVQCVLGVISDLG 274
            P++ S   VL   S  G
Sbjct: 665 KPNNVSFASVLSACSHSG 682


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 221/682 (32%), Positives = 339/682 (49%), Gaps = 76/682 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A++ +V MI   +  +S TF   L + A
Sbjct: 15  YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 74

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
                  G QIHG  LK G+   + V  SLI+MY +                        
Sbjct: 75  KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQ------------------------ 110

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            E L  + ++   +   D V+     TAL+  Y   G +  A  +F+     D+ +WNAM
Sbjct: 111 NERLEDAHKVFDRSSHRDVVS----YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAM 166

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY+ + N  +ALELF  M  +  R DE T+ T + A      ++ G+Q+H++    GF
Sbjct: 167 ISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGF 226

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D Y KCG M  A  +F  +   D ++W  +I G         AL ++ +
Sbjct: 227 GSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQE 286

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAKC 641
           M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMY+KC
Sbjct: 287 MLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKC 346

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+IE A+ +F  M  ++   WNAM+ G A HG       +F  M+ + ++PD +TF+G+L
Sbjct: 347 GDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLL 406

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS+ G++      F  M   Y I P++EHY  ++D LG +G  KEA E+I +M  E  
Sbjct: 407 SACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPD 466

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             +  +LL AC++ G+ E G+  A+ L  +EP +  +YVLLSNI+A A +W++V   RG 
Sbjct: 467 GVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGL 526

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           +  K +KK P                          I+  +E +   ++E G+VPDT  V
Sbjct: 527 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEV 586

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------KE 898
           L ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K 
Sbjct: 587 LQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKR 646

Query: 899 PLYA---NRFHHLRDGMCPCAD 917
            + A    RFHH RDG+C C D
Sbjct: 647 EIIARDRTRFHHFRDGVCSCND 668



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 231/496 (46%), Gaps = 31/496 (6%)

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           +F+ +QE ++++W  M R +A +        L+V +   GL P+  +   +L   + L  
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 276 RHEE-QVQAYAIKLL----LYNNNSNVVLW--NKKLSGYLQVGD--NHGAIECFVNMIRS 326
             E  Q+  + +KL     LY + S + ++  N++L    +V D  +H  +  +  ++  
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN--SLINMYSKMGCVC 384
              Y S  ++ +  A    D + +   +    + SG+   V  GN    + ++ +M    
Sbjct: 139 ---YASRGYIES--ARNMFDEIPVKDVVSWNAMISGY---VETGNYKEALELFKEM-MKT 189

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            +R D+ T+ +V+ AS+     + L +Q+H     +   ++  +  ALID Y + G M  
Sbjct: 190 NVRPDESTMVTVISASAR-SGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF      D+ +WN +I GY   N   +AL LF  M  SGE  +++T+ + + AC  
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308

Query: 505 LLMLKQGKQMHAYAMK--SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           L  +  G+ +H Y  K   G      + + ++DMY KCG +  A  +FN +      AW 
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI-- 620
            MI G   +G  + A  I+ +MR + + PD+ TF  L+ A S    L+ GR I  ++   
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428

Query: 621 -KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEET 678
            K+    + +    ++D+    G  ++A  +   M M  + V+W ++L     HGN E  
Sbjct: 429 YKITPKLEHYG--CMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELG 486

Query: 679 LKLFEDMKAHGVEPDS 694
            K  +++    +EP++
Sbjct: 487 EKFAQNL--FKIEPNN 500



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G +  AR +FD++P +D++SWN++++ Y  +G    
Sbjct: 119 KVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETG---- 174

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            N  E   LF+ + ++       T+  ++     SG +     VH +    G   +  + 
Sbjct: 175 -NYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIV 233

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL++ YSK G++  A  LF G+  +DV+ W +++  Y      +E   LF ++ RSG  
Sbjct: 234 NALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGES 293

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYNNNS--------- 295
           P+D ++  +L   + LG             KR +    A +++  L +  S         
Sbjct: 294 PNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAH 353

Query: 296 ---NVVL------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
              N +L      WN  + G+   G  + A + F  M ++ ++ D +TF+  L+A +   
Sbjct: 354 QVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAG 413

Query: 347 NLNLGQQI 354
            L+LG+ I
Sbjct: 414 MLDLGRHI 421



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 137/340 (40%), Gaps = 67/340 (19%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + +L+ WN++   +A S      +     +L+  +       +  T  
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALS-----PDPVSALKLYVCMISLGLLPNSYTFP 67

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY------------------- 204
            LLK C           +HG+ LK+G   D +V  +L+++Y                   
Sbjct: 68  FLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHR 127

Query: 205 ------------SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
                       +  G I  A+ +FD +  +DVV W  M+  Y E G  +E   LF ++ 
Sbjct: 128 DVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMM 187

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAY----------------------- 284
           ++ + PD+ ++  V+   +     +LG++    +  +                       
Sbjct: 188 KTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEME 247

Query: 285 -AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            A  L L  +  +V+ WN  + GY  +     A+  F  M+RS    + VT L  L A A
Sbjct: 248 TACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACA 307

Query: 344 GTDNLNLGQQIHGTTLK--SGFYSAVIVGNSLINMYSKMG 381
               +++G+ IH    K   G  +A  +  SLI+MYSK G
Sbjct: 308 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCG 347



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 7/223 (3%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   +++  +  +  + LG+  H+ I +     +  + N L+  YS+CG +  A  LF  
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +  +D+ISWN ++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 256 LSYKDVISWNILIGGYTH-----LNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLG 310

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+     +  +L+++YSK G I  A  +F+ M  + +  W  M
Sbjct: 311 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAM 370

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  +A +G     F +F  + ++ + PDD +   +L   S  G
Sbjct: 371 IFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAG 413


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 213/634 (33%), Positives = 334/634 (52%), Gaps = 55/634 (8%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N+++WN    G+    D   A++ +V MI   +  +S TF   L + A
Sbjct: 43  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 102

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK G    + V  SLI+MY + G     R +              
Sbjct: 103 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG-----RLED------------- 144

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                       H + +++     VS TALI  Y   G +  A+ +F+     D+ +WNA
Sbjct: 145 -----------AHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNA 193

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY  + N  +ALELF  M  +  R DE T+ T V AC     ++ G+Q+H++    G
Sbjct: 194 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 253

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  +L + + ++D+Y KCG +  A  +F  +P  D ++W T+I G         AL ++ 
Sbjct: 254 FGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 313

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAK 640
           +M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAK
Sbjct: 314 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAK 373

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+IE A+ +F  +  ++   WNAM+ G A HG  + +  +F  M+ +G+EPD +TF+G+
Sbjct: 374 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGL 433

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS++G++      F  M + Y + P++EHY  ++D LG +G  KEA E+I +M  E 
Sbjct: 434 LSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP 493

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              +  +LL AC++ G+ E G+  A+ L+ +EP +  +YVLLSNI+A A +W++V + R 
Sbjct: 494 DGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRA 553

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
            +  K +KK P                          I+  +E +   ++E G+VPDT  
Sbjct: 554 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSE 613

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
           VL ++EEE KE AL +HSEKLA A+GLIST P +
Sbjct: 614 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGT 647



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 231/527 (43%), Gaps = 102/527 (19%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + +L+ WN++   +A S +          +L+  +       +  T  
Sbjct: 41  LPYAISVFETIQEPNLLIWNTMFRGHALSSDP-----VSALKLYVCMISLGLLPNSYTFP 95

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S      + +HG+ LK+G   D +V  +L+++Y + G++ +A  +FD    R
Sbjct: 96  FLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHR 155

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV +  +++ YA  G+ E    +F          D+  V+                   
Sbjct: 156 DVVSYTALIKGYASRGYIENAQKMF----------DEIPVK------------------- 186

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       +VV WN  +SGY + G+   A+E F +M+++NV+ D  T +  ++A A
Sbjct: 187 ------------DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 234

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---CVCGL-------------- 386
            + ++ LG+Q+H      GF S + + N+LI++YSK G     CGL              
Sbjct: 235 QSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNT 294

Query: 387 --------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                       +  T+ S+L A + L   + + + IHV+  K 
Sbjct: 295 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG-AIDIGRWIHVYIDKR 353

Query: 421 -DTVAD-SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
              VA+ S + T+LID+Y + G +  A  +F +     L++WNAMIFG+ +   +  + +
Sbjct: 354 LKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 413

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGI 533
           +FS M  +G   D+IT    + AC    ML  G+ +       Y M    E   C    +
Sbjct: 414 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGC----M 469

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
           +D+    G   +A+ + N +   PD V W +++  C  +G  +L  S
Sbjct: 470 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 516



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 144/308 (46%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+  Y+  G +  A+++FD++P +D++SWN++++ YA +G    
Sbjct: 147 KVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETG---- 202

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            N  E   LF+ + ++       T+  ++  C  SG +     VH +    G   +  + 
Sbjct: 203 -NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIV 261

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++YSK G++  A  LF+G+  +DV+ W  ++  Y      +E   LF ++ RSG  
Sbjct: 262 NALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 321

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYNNNS--------- 295
           P+D ++  +L   + LG             KR +    A +++  L +  +         
Sbjct: 322 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAH 381

Query: 296 ---NVVL------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
              N +L      WN  + G+   G    + + F  M ++ ++ D +TF+  L+A + + 
Sbjct: 382 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSG 441

Query: 347 NLNLGQQI 354
            L+LG+ I
Sbjct: 442 MLDLGRHI 449



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 12/229 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   +++     +  + LG+  H+ I +     +  + N L+ +YS+CG L  A  LF+ 
Sbjct: 224 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEG 283

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +P +D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 284 LPYKDVISWNTLIGGYTH-----MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+     +  +L+++Y+K G I  A  +F+ +  + +  W  M
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 398

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +A +G  +  F +F  + ++G+ PDD +   +L   S     DLG+
Sbjct: 399 IFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 447


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  348 bits (894), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 200/582 (34%), Positives = 311/582 (53%), Gaps = 49/582 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLH-LSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSM 442
           GLR + FT  S  +A++  P     +  QIH  A++   +  D FVS A +D+Y + G +
Sbjct: 106 GLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCL 165

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  LFE     ++  WNA++   ++     +  + +  +  +G   + +++     AC
Sbjct: 166 GLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNAC 225

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
              + L  G+Q H + +  GF++D+ VS+ ++D Y KC     A+++F+ +   + V+W 
Sbjct: 226 AGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWC 285

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +MI     +G E+ AL++Y   R +G  P +F  + ++   + L  L  GR +HA  ++ 
Sbjct: 286 SMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRS 345

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              ++ FV  +LVDMY KCG +EDA  +F  M  RN V WNAM+ G A  G+ +  L +F
Sbjct: 346 CIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVF 405

Query: 683 EDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           + M ++ G  P+ +T + V++ACS  GL  + YE F  MRE++G+EP  EHY+ +VD LG
Sbjct: 406 DAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLG 465

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG  + A E+I  MP   S S+  ALLGAC++ G TE G+  +EKL  L+P DS  +VL
Sbjct: 466 RAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVL 525

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFAK---------VEGL 842
           LSN+ A+A +W + T  R EMK   +KK+P            + +AK         ++ L
Sbjct: 526 LSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQAL 585

Query: 843 IKRIKE----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           + ++K+     GY+PDT + L DVEEEEKE  ++ HSEKLA A+GLI  PPS  I   K 
Sbjct: 586 LAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKN 645

Query: 899 PLYA-----------------------NRFHHLRDGMCPCAD 917
                                      NRFH+ +   C C D
Sbjct: 646 LRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKD 687



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 35/286 (12%)

Query: 71  LGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           +G   HA  L    +P D F++   M MY + G L  ARRLF++MP+R++I+WN+++   
Sbjct: 131 VGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNA 190

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G        E F+ +  LRE+    + +++      C  + ++   E  HG+ +  G
Sbjct: 191 VIDGR-----PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCG 245

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D  VS A+V+ Y K     +A+ +FDGM+ R+ V W  M+ AYA++G  E+   +++
Sbjct: 246 FDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYM 305

Query: 250 DLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNN--------------- 293
               +G  P D  V  VL   +  LG      + A A++  +  N               
Sbjct: 306 GARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCG 365

Query: 294 -------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                          N+V WN  + GY  +GD   A+  F  MIRS
Sbjct: 366 GVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRS 411



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 106/484 (21%), Positives = 183/484 (37%), Gaps = 94/484 (19%)

Query: 179 ETVHGYALKI---GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              H  AL++   GL    F+   LVN+YSK      A           VV +   +   
Sbjct: 29  RAAHARALRLLSPGL--PPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGA 86

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDD-------ESVQCVLGVISDLGKRHEEQVQAYAIK- 287
           A++         F  + R GL P+D       ++  C     S +G     Q+ A A++ 
Sbjct: 87  AQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGP----QIHALALRF 142

Query: 288 ----------------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                       L     N NV+ WN  ++  +  G      + 
Sbjct: 143 GYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKA 202

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           +  +  +    + V+      A AG   L+LG+Q HG  +  GF   V V N++++ Y K
Sbjct: 203 YFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGK 262

Query: 380 MGCV-------------------------------------------CGLRTDQFTLASV 396
             C                                             G     F ++SV
Sbjct: 263 CRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSV 322

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L   + L  GL+  + +H  A+++   A+ FV++AL+D+Y + G + +AE +F +    +
Sbjct: 323 LTTCAGL-LGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERN 381

Query: 457 LATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           L TWNAMI GY    ++  AL +F  M  + G   + IT+   + AC    + K G ++ 
Sbjct: 382 LVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELF 441

Query: 516 AYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNG 572
              M+  F ++      + ++D+  + G    A  I   +P  P    W  ++  C  +G
Sbjct: 442 D-TMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHG 500

Query: 573 EEDL 576
           + +L
Sbjct: 501 KTEL 504



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 12/248 (4%)

Query: 509 KQGKQMHAYAMK---SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           + G+  HA A++    G    +C    ++++Y K      A S     P P  V++T  I
Sbjct: 26  RLGRAAHARALRLLSPGLPPFICAH--LVNLYSKLDLPAAAASALASDPNPTVVSFTAFI 83

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL--EQGRQIHANLIKLD 623
           SG   +     ALS +  M   G+ P++FTF    KA++C        G QIHA  ++  
Sbjct: 84  SGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFG 143

Query: 624 -CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               DPFV  + +DMY K G +  A  LF++M  RN + WNA++      G   ET K +
Sbjct: 144 YLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAY 203

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             ++  G  P+ V+     +AC+    +S   E FH      G + +V   + +VD  G+
Sbjct: 204 FGLREAGGMPNVVSVCAFFNACAGAMFLSLG-EQFHGFVVTCGFDMDVSVSNAMVDFYGK 262

Query: 743 ---AGRTK 747
              AG+ +
Sbjct: 263 CRCAGKAR 270



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 7/188 (3%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG+  H  ++      D  ++N ++  Y +C     AR +FD M  R+ +SW S++ A
Sbjct: 231 LSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVA 290

Query: 129 YA-HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           YA H  E +A  V  G R           +S LT    L L L+ G       +H  A++
Sbjct: 291 YAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGL-LGLNFG-----RALHAVAVR 344

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             +  + FV+ ALV++Y K G + +A+ +F  M ER++V W  M+  YA  G  +    +
Sbjct: 345 SCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAV 404

Query: 248 FVDLHRSG 255
           F  + RSG
Sbjct: 405 FDAMIRSG 412



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L  G++ HA  + S    + F+ + L+ MY +CG +  A ++F  MP+R
Sbjct: 321 SVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER 380

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +L++WN+++  YAH G+  A+N    F     +R   T  + +TL  ++  C   G
Sbjct: 381 NLVTWNAMIGGYAHIGD--AQNALAVFDAM--IRSGGTSPNHITLVNVITACSRGG 432


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 210/610 (34%), Positives = 320/610 (52%), Gaps = 78/610 (12%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  + +T   +L++ + L    H  KQIH H +K   V+D F+ T+LI++Y ++G M  
Sbjct: 124 GVEPNSYTFPFLLKSCAKLASA-HEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNN 182

Query: 445 AEYLFENKD-----------------GF--------------DLATWNAMIFGYILSNNS 473
           A+ +F+  +                 G+              D+ +WNAMI GY     S
Sbjct: 183 AQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRS 242

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            +AL LF  M  +    +E TI + + AC     L  G  M ++    G   +L + + +
Sbjct: 243 KEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNAL 302

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +DMY KCG +  A+ +F+D+   D ++W  MI G         AL+++ +M  SGV P E
Sbjct: 303 IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            TF  ++ + + L A++ G+ IHA + K   S    +  SL+D+YAKCGNI  A  +F  
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDG 422

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M +++   WNAM+ GLA HG  ++  +LF  M + G+EP+ +TF+G+LSAC + GLV   
Sbjct: 423 MKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLG 482

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F  M + Y I P+ +HY  ++D LGRAG  +EA  L+ +M  +   ++  +LLGACR
Sbjct: 483 QQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACR 542

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
             G  E G+ VAE+L  LEP +  AYVLLSNI+A A +WDDV   R  +  + +KK P  
Sbjct: 543 DHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGC 602

Query: 832 ---------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                ++ I+  +E + +++K  G+V DT  VL D++EE KE A
Sbjct: 603 TTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGA 662

Query: 871 LYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHH 907
           L +HSEKLA A+GLIST P + I                     + N+E +    NRFHH
Sbjct: 663 LSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHH 722

Query: 908 LRDGMCPCAD 917
            +DG C C D
Sbjct: 723 FKDGSCSCND 732



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 164/333 (49%), Gaps = 33/333 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALID--VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           KQIH H IK       F  + LI+     R+G ++ A  LF + +  +L  WN+MI G  
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           +S +   AL  F  M  SG   +  T    +K+C  L    +GKQ+HA+ +K GF  D+ 
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165

Query: 529 VSSGILDMYVKCGAMVDAQ-------------------------------SIFNDIPAPD 557
           + + +++MY + G M +AQ                                +F+++P  D
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+W  MI+G    G    AL ++  MR + V P+E T   ++ A +   AL+ G  + +
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +      S+  +  +L+DMY+KCG+++ A  LF  M  R+ + WN M+ G     + +E
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
            L LF +M A GVEP  +TF+ +L +C++ G +
Sbjct: 346 ALALFREMLASGVEPTEITFLSILPSCAHLGAI 378



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 244/572 (42%), Gaps = 106/572 (18%)

Query: 73  KSTHARILNSSQIPDRFLTNNLM--TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA I+ +      F  + L+  +  SR G + YA  LF+ + + +L  WNS++   +
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            S    A  +    R+  S  E  ++T       LLK C         + +H + LK+G 
Sbjct: 106 MS-LSPALALVFFVRMIYSGVEPNSYT----FPFLLKSCAKLASAHEGKQIHAHVLKLGF 160

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           V D F+  +L+N+Y++ G++  A+ +FD    RD + +  ++  YA  G+ +    LF  
Sbjct: 161 VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF-- 218

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
                   D+  V+                               +VV WN  ++GY Q+
Sbjct: 219 --------DEMPVK-------------------------------DVVSWNAMIAGYAQM 239

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G +  A+  F +M ++NV  +  T +  L+A A ++ L+LG  +       G  S + + 
Sbjct: 240 GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLV 299

Query: 371 NSLINMYSKMG-------------------------------------------CVCGLR 387
           N+LI+MYSK G                                              G+ 
Sbjct: 300 NALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVE 359

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
             + T  S+L + + L   + L K IH +  KN     + +ST+LID+Y + G++  A  
Sbjct: 360 PTEITFLSILPSCAHLG-AIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQ 418

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+      LA+WNAMI G  +   + KA ELFS M + G   +EIT    + AC    +
Sbjct: 419 VFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGL 478

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSG------ILDMYVKCGAMVDAQSIFNDIPA-PDDVA 560
           +  G+Q  +  ++     D  +S        ++D+  + G   +A+S+  ++   PD   
Sbjct: 479 VDLGQQFFSSMVQ-----DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAI 533

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           W +++  C D+G  +L   +    RL  + PD
Sbjct: 534 WGSLLGACRDHGRVELGELVAE--RLFELEPD 563



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 40/285 (14%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           ++  KQ+HA+ +K+G    L   S +++     + G +  A S+FN I  P+   W +MI
Sbjct: 42  IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMI 101

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   +    LAL  + +M  SGV P+ +TF  L+K+ + L +  +G+QIHA+++KL   
Sbjct: 102 RGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFV 161

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQ-------------------------------M 654
           SD F+  SL++MYA+ G + +A ++F Q                               M
Sbjct: 162 SDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEM 221

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
            +++ V WNAM+ G AQ G  +E L LFEDM+   V P+  T + VLSAC+     S A 
Sbjct: 222 PVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ----SNAL 277

Query: 715 ENFHLMR---EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           +  + MR   E  G+   ++  + L+D   + G  + A EL   M
Sbjct: 278 DLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 11/256 (4%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +LL F      +   + S   S+L     ++ L LG S  + I +     +  L N L+ 
Sbjct: 245 ALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALID 304

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MYS+CG L  AR LFD M +RD+ISWN ++  Y H       +  E   LFR +  S   
Sbjct: 305 MYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMC-----SYKEALALFREMLASGVE 359

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            + +T   +L  C   G +   + +H Y  K        +S +L+++Y+K G I  A+ +
Sbjct: 360 PTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQV 419

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV-----IS 271
           FDGM+ + +  W  M+   A +G  ++ F LF  +   G+ P++ +   +L       + 
Sbjct: 420 FDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLV 479

Query: 272 DLGKR-HEEQVQAYAI 286
           DLG++     VQ Y I
Sbjct: 480 DLGQQFFSSMVQDYKI 495



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 183/437 (41%), Gaps = 77/437 (17%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           S +L+L+ F++  +     +S  +  +L+     +    GK  HA +L    + D F+  
Sbjct: 109 SPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHT 168

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG----------EGNAENVT- 141
           +L+ MY++ G +  A+ +FD+   RD IS+ +++A YA  G          E   ++V  
Sbjct: 169 SLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVS 228

Query: 142 ---------------EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
                          E   LF  +R++    +  T+  +L  C  S  +    ++  +  
Sbjct: 229 WNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIE 288

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
             GL  +  +  AL+++YSK G ++ A+ LFD M ERDV+ W VM+  Y      +E   
Sbjct: 289 DRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALA 348

Query: 247 LFVDLHRSGLCPDDESVQCV------LGVISDLGKRHEEQVQAYAIK------------- 287
           LF ++  SG+ P + +   +      LG I DLGK     + AY  K             
Sbjct: 349 LFREMLASGVEPTEITFLSILPSCAHLGAI-DLGK----WIHAYINKNFNSVSTSLSTSL 403

Query: 288 LLLYNNNSNVVL---------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
           + LY    N+V                WN  + G    G    A E F  M    ++ + 
Sbjct: 404 IDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNE 463

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL--RTDQ 390
           +TF+  L+A      ++LGQQ         F+S+++    +       GC+  L  R   
Sbjct: 464 ITFVGILSACKHAGLVDLGQQ---------FFSSMVQDYKISPKSQHYGCMIDLLGRAGL 514

Query: 391 FTLA-SVLRASSSLPEG 406
           F  A S+L+     P+G
Sbjct: 515 FEEAESLLQNMEVKPDG 531



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 23/252 (9%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y ++ S+  +L  F +        +   + SIL        + LGK  HA I  +     
Sbjct: 337 YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVS 396

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             L+ +L+ +Y++CG++V AR++FD M  + L SWN+++   A  G+ +     + F LF
Sbjct: 397 TSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQAD-----KAFELF 451

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETVHGYALKIGLVWDEFVSGALVN 202
             +       + +T   +L  C  +G V     + S  V  Y  KI      +  G +++
Sbjct: 452 SKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDY--KISPKSQHY--GCMID 507

Query: 203 IYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENG---FGEEVFHLFVDLHRSGLCP 258
           +  + G   EA+ L   M+ + D  +W  +L A  ++G    GE V     +L      P
Sbjct: 508 LLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELE-----P 562

Query: 259 DDESVQCVLGVI 270
           D+     +L  I
Sbjct: 563 DNPGAYVLLSNI 574


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 216/718 (30%), Positives = 355/718 (49%), Gaps = 93/718 (12%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+   L+  Y+K G++  A+ +FD M + ++     +L A A                 S
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAH----------------S 92

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
            L PD E                         +L       + V +N  ++G+   G   
Sbjct: 93  RLVPDME-------------------------RLFASMPERDAVSYNALITGFSSTGSPA 127

Query: 315 GAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            +++ +  ++R  +V+   +T    +   +   +  LG  +H   L+ GF +   VG+ L
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           ++MY+KM    GL  D   +   + A +                +  +T+    +   +I
Sbjct: 188 VDMYAKM----GLIRDARRVFQEMEAKT---------------VVMYNTLITGLLRCKMI 228

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           +         +A+ LF+     D  TW  M+ G   +    +AL++F  M   G  +D+ 
Sbjct: 229 E---------DAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T  + + ACG L  L++GKQ+HAY  ++ +E ++ V S ++DMY KC ++  A+++F  +
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              + ++WT MI G   N   + A+  + +M++ G+ PD+FT   ++ + + L +LE+G 
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q H   +         V  +LV +Y KCG+IEDA+ LF +M   + V W A++ G AQ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +ET+ LFE M A+G++PD VTFIGVLSACS  GLV +  + F  M++ +GI P  +HY
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + ++D   R+GR KEA E I  MP    A     LL +CR++G+ E GKW AE L+  +P
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDP 579

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------------- 831
            + ++YVLL ++ AA  QW +V   R  M+ + VKK+P                      
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 639

Query: 832 -ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
            +  I+ K+E L  ++ E GY PD   VL DV + +K   + +HSEKLA A+GLI  P
Sbjct: 640 FSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVP 697



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 129/595 (21%), Positives = 220/595 (36%), Gaps = 151/595 (25%)

Query: 74  STHARILNSS-QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           + H  IL +  Q P  FL N+L+T Y++ G L  ARR+FD+MPD +L + N++L+A AHS
Sbjct: 33  AVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHS 92

Query: 133 --------------------------GEGNAENVTEGFRLFRS-LRESITFTSRLTLAPL 165
                                     G  +  +     +L+R+ LRE     +R+TL+ +
Sbjct: 93  RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ---- 221
           + +  +        +VH   L++G     FV   LV++Y+K G IR+A+ +F  M+    
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 222 ---------------------------ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
                                      +RD + W  M+    +NG   E   +F  +   
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272

Query: 255 GLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN------------------- 294
           G+  D  +   +L     L    E +Q+ AY I    Y +N                   
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAY-ITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 295 ----------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                      N++ W   + GY Q   +  A+  F  M    ++ D  T    +++ A 
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
             +L  G Q H   L SG    + V N+L+ +Y K G                    S+ 
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG--------------------SIE 431

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           +   L  ++  H        D    TAL+  Y + G   E                    
Sbjct: 432 DAHRLFDEMSFH--------DQVSWTALVTGYAQFGKAKE-------------------- 463

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GF 523
                       ++LF  M  +G + D +T    + AC    ++++G        K  G 
Sbjct: 464 -----------TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI 512

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                  + ++D+Y + G   +A+     +P +PD   W T++S C   G  ++ 
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    + + L  GK  HA I  +    + F+ + L+ MYS+C S+  A  +F +M  R
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ISW +++  Y     G      E  R F  ++         TL  ++  C +   +  
Sbjct: 343 NIISWTAMIVGY-----GQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE 397

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
               H  AL  GL+    VS ALV +Y K G I +A  LFD M   D V W  ++  YA+
Sbjct: 398 GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ 457

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            G  +E   LF  +  +GL PD  +   VL   S  G
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 19/183 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    + + L  G   H   L S  +    ++N L+T+Y +CGS+  A RLFD+M   
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
           D +SW +++  YA  G+       E   LF  +  +      +T   +L  C  +G    
Sbjct: 444 DQVSWTALVTGYAQFGKAK-----ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEK 498

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWK 229
              Y  + +  HG    I  + D +    ++++YS+ G+ +EA+     M    D   W 
Sbjct: 499 GCDYFDSMQKDHG----IVPIDDHYT--CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552

Query: 230 VML 232
            +L
Sbjct: 553 TLL 555


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 224/706 (31%), Positives = 347/706 (49%), Gaps = 108/706 (15%)

Query: 276 RHEEQVQAYAIK----LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
           R  + VQA  ++    L LY   ++  L N+ L  Y + G+   A + F  M R +V   
Sbjct: 34  RSNDVVQAKRLQTHMDLHLYQP-TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDV--- 89

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------- 384
             ++   L+A + + N+   + +     +   + AV   N++I  +S  GC         
Sbjct: 90  -FSWNAMLSAYSKSGNV---EDLRAVFDQMSVHDAVSY-NTVIAGFSGNGCSSQALEFFV 144

Query: 385 -----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                G  +  +T  SVL A S L + +   KQIH   +        FV  AL ++Y + 
Sbjct: 145 RMQEEGFESTDYTHVSVLHACSQLLD-IKRGKQIHGRIVATSLGESVFVWNALTNMYAKC 203

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G++ +A +LF+     ++ +WN+MI GY+ +       +LF  M +SG   D++TI    
Sbjct: 204 GALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI---- 259

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
                                          S IL  Y +CG + +A   F +I   D V
Sbjct: 260 -------------------------------SNILSAYFQCGYIDEACKTFREIKEKDKV 288

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            WTTM+ GC  NG+E+ AL ++ +M L  V PD FT + +V + + L +L QG+ +H   
Sbjct: 289 CWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKA 348

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           +      D  V  +LVDMY+KCG   DA+I+FK+M  RN + WN+M++G AQ+G   E L
Sbjct: 349 VIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEAL 408

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            L+E+M    ++PD++TF+GVLSAC + GLV      F+ + + +G+ P  +HYS +++ 
Sbjct: 409 ALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINL 468

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAG   +A +LI SM FE +  +   LL  CR+  D   G+  A  L  L+P ++  Y
Sbjct: 469 LGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPY 528

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           ++LSNI+AA  +W DV + R  MK   +KK  A                       + I+
Sbjct: 529 IMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIY 588

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV---I 893
            ++  LIK+++E G+ PDT+ VL DV EEEK  ++ YHSEKLA A+ LI  P       I
Sbjct: 589 EELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRI 648

Query: 894 LSN------------------KEPLY---ANRFHHLRDGMCPCADN 918
           + N                  + P+     NRFHH  +G C C D+
Sbjct: 649 MKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDS 694



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 231/524 (44%), Gaps = 54/524 (10%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D F+   L+++Y+K G + +A+ LFD M  RDV  W  ML AY+++G  E++  +F    
Sbjct: 57  DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVF---- 112

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                 D  SV                                + V +N  ++G+   G 
Sbjct: 113 ------DQMSVH-------------------------------DAVSYNTVIAGFSGNGC 135

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
           +  A+E FV M     +    T +  L A +   ++  G+QIHG  + +    +V V N+
Sbjct: 136 SSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNA 195

Query: 373 LINMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSK-----QIHVHAIKNDTVAD 425
           L NMY+K G +   R   D+    +V+  +S +   L   +     ++      +  + D
Sbjct: 196 LTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPD 255

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
               + ++  Y + G + EA   F      D   W  M+ G   +     AL LF  M  
Sbjct: 256 QVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLL 315

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
              R D  TI++ V +C  L  L QG+ +H  A+  G + DL VSS ++DMY KCG   D
Sbjct: 316 ENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETAD 375

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A  +F  +   + ++W +MI G   NG++  AL++Y +M    + PD  TF  ++ A   
Sbjct: 376 AWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMH 435

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMR-NTVLWN 663
              +E+G+    ++ K+   +  F   S ++++  + G ++ A  L K M    N ++W+
Sbjct: 436 AGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWS 495

Query: 664 AMLVGLAQH---GNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            +L     +    NGE   +   ++  H   P  +    + +AC
Sbjct: 496 TLLSVCRINCDVNNGEMAARHLFELDPHNAGP-YIMLSNIYAAC 538



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 168/361 (46%), Gaps = 37/361 (10%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARI-LNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           +++S  +  +L   + ++D++  K     + L+  Q  D FL N L+ +Y++ G+L  AR
Sbjct: 19  TANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDAR 78

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENV---------------------------- 140
            LFDKM  RD+ SWN++L+AY+ S  GN E++                            
Sbjct: 79  DLFDKMSRRDVFSWNAMLSAYSKS--GNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCS 136

Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           ++    F  ++E    ++  T   +L  C     +   + +HG  +   L    FV  AL
Sbjct: 137 SQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNAL 196

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
            N+Y+K G + +A++LFD M  ++VV W  M+  Y +NG  E    LF ++  SGL PD 
Sbjct: 197 TNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQ 256

Query: 261 ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
            ++  +L      G   E      A K        + V W   + G  Q G    A+  F
Sbjct: 257 VTISNILSAYFQCGYIDE------ACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLF 310

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M+  NV+ D+ T    +++ A   +L  GQ +HG  +  G    ++V ++L++MYSK 
Sbjct: 311 REMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKC 370

Query: 381 G 381
           G
Sbjct: 371 G 371



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 128/315 (40%), Gaps = 63/315 (20%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           S +L     +Q+  F S+  +    S+L       D+  GK  H RI+ +S     F+ N
Sbjct: 137 SQALEFFVRMQEEGFESTDYTH--VSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWN 194

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNS---------------------------- 124
            L  MY++CG+L  AR LFD+M +++++SWNS                            
Sbjct: 195 ALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMP 254

Query: 125 -------ILAAYAHSGE------------------------GNAENVTE--GFRLFRSLR 151
                  IL+AY   G                         G A+N  E     LFR + 
Sbjct: 255 DQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREML 314

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                    T++ ++  C     +   + VHG A+  G+  D  VS ALV++YSK G+  
Sbjct: 315 LENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETA 374

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           +A  +F  M  R+V+ W  M+  YA+NG   E   L+ ++    L PD+ +   VL    
Sbjct: 375 DAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACM 434

Query: 272 DLGKRHEEQVQAYAI 286
             G     Q   Y+I
Sbjct: 435 HAGLVERGQGYFYSI 449



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 24/211 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      + L  G++ H + +      D  +++ L+ MYS+CG    A  +F +M  R
Sbjct: 327 SVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTR 386

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS----- 172
           ++ISWNS++  YA +G+       E   L+  +         +T   +L  C+ +     
Sbjct: 387 NVISWNSMILGYAQNGKD-----LEALALYEEMLHENLKPDNITFVGVLSACMHAGLVER 441

Query: 173 --GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
             GY ++   +HG    +   +D +    ++N+  + G + +A  L   M  E + ++W 
Sbjct: 442 GQGYFYSISKIHG----MNPTFDHY--SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWS 495

Query: 230 VML---RAYAENGFGE-EVFHLF-VDLHRSG 255
            +L   R   +   GE    HLF +D H +G
Sbjct: 496 TLLSVCRINCDVNNGEMAARHLFELDPHNAG 526


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 206/611 (33%), Positives = 332/611 (54%), Gaps = 55/611 (9%)

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA---SSSLPEGLHLSKQ 412
           G  +   F++ +++   ++ ++  M  V  +R +++  A+++ +   S  + EG     Q
Sbjct: 97  GALMAGYFHNGLVL--EVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW----Q 150

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
            H +A+K+  V   +V  ALI +Y R   +  A  ++    G D+ ++N +I G + +  
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
             +ALE+   M       D +T  TA   C  L  L+ G Q+H    ++G E D  VSS 
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           I+DMY KCG +++A+ +FN +   + V+WT +++    NG  + AL+ + +M + G++P+
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPN 330

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           E+TFA+L+ + + ++AL  G+ +H  + K        VG +L++MY+K G+IE A+ +F 
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFL 390

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           +M  R+++ W+AM+ GL+ HG G E L +F++M A    P  VTF+GVLSAC++ G V E
Sbjct: 391 EMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQE 450

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            +   + + ++ GIEP VEHY+ +V  L +AGR  EA   + S P +      R LL AC
Sbjct: 451 GFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSAC 510

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP- 831
            V  +   GK VAE ++ ++P D   Y+LLSN++A A +WD V   R  M+ +NVKK+P 
Sbjct: 511 HVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPG 570

Query: 832 ----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                 ++ I+ KV+ L+  I+  GYVPD   V  DVE+E+K  
Sbjct: 571 ASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKRE 630

Query: 870 ALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANRFH 906
            + YHSEKLA AYGL+ TP   P  VI                  ++N+  +   ANRFH
Sbjct: 631 YVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFH 690

Query: 907 HLRDGMCPCAD 917
              DG C CAD
Sbjct: 691 CFGDGGCSCAD 701



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 175/359 (48%), Gaps = 4/359 (1%)

Query: 401 SSLPEGLHLSKQIHVH-AIKNDTVADSFVST-ALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           S+  + L   K IH H  I N    D+ V   +LI++Y +   +  A  LF+     ++ 
Sbjct: 35  SADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVV 94

Query: 459 TWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           +W A++ GY  +    + L LF  M      R +E   AT + +C     + +G Q H Y
Sbjct: 95  SWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGY 154

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           A+KSG      V + ++ MY +   +  A S++ ++P  D  ++  +I+G ++NG    A
Sbjct: 155 ALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEA 214

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L +  +M    +V D  T+       S L  L  G Q+H  + +     D FV  +++DM
Sbjct: 215 LEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDM 274

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y KCGNI +A  +F ++  +N V W A+L   +Q+G  EE L  F +M+  G+ P+  TF
Sbjct: 275 YGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTF 334

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
             +L++C+    +    +  H   +K G E  +   + L++   ++G  + A ++ L M
Sbjct: 335 AVLLNSCAGISALGHG-KLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEM 392



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 237/568 (41%), Gaps = 109/568 (19%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQ-IPDRFL-TNNLMTM 97
           PFL KS  +          +L+ +  T +L  GK  HA ++ ++Q   D  +  N+L+ +
Sbjct: 13  PFLLKSS-TVGHPLEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINL 71

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF- 156
           Y++C  ++ AR LFD M  R+++SW +++A Y H+G      V E  RLF+++  S+ + 
Sbjct: 72  YAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGL-----VLEVLRLFKTMI-SVDYM 125

Query: 157 -TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
             +    A ++  C  SG V      HGYALK GLV+ ++V  AL+ +YS+   ++ A  
Sbjct: 126 RPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMS 185

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-- 273
           ++  +   DV  + +++    ENG+  E   +   +    +  D+ +     G+ S L  
Sbjct: 186 VWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKD 245

Query: 274 --------------GKRHEEQVQAYAIKLL-----------LYN--NNSNVVLWNKKLSG 306
                         G  ++  V +  I +            ++N     NVV W   L+ 
Sbjct: 246 LRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAA 305

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q G    A+  F  M    +  +  TF V L + AG   L  G+ +H    KSGF   
Sbjct: 306 YSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDH 365

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
           +IVGN+LINMYSK G +                     E  H                  
Sbjct: 366 IIVGNALINMYSKSGSI---------------------EAAH------------------ 386

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
                 +++ CR                 D  TW+AMI G        +AL +F  M  +
Sbjct: 387 ---KVFLEMICR-----------------DSITWSAMICGLSHHGLGREALVVFQEMLAA 426

Query: 487 GERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            E    +T    + AC  L  +++G     + M    ++ G E   C    I+ +  K G
Sbjct: 427 KECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTC----IVGLLCKAG 482

Query: 542 AMVDAQSIFNDIPAP-DDVAWTTMISGC 568
            + +A++     P   D VAW T++S C
Sbjct: 483 RLDEAENFMKSTPVKWDVVAWRTLLSAC 510



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 26/320 (8%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL LG   H R+  +    D F+++ ++ MY +CG+++ AR++F+++  ++++SW +ILA
Sbjct: 245 DLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILA 304

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AY+ +G        E    F  +       +  T A LL  C     +   + +H    K
Sbjct: 305 AYSQNG-----CFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKK 359

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G      V  AL+N+YSK G I  A  +F  M  RD + W  M+   + +G G E   +
Sbjct: 360 SGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVV 419

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHE------EQVQAYAIKLLLYNNNSNVVLWN 301
           F ++  +  CP   +   VL   + LG   E      + ++   I+  + +    V L  
Sbjct: 420 FQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLC 479

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK- 360
           K  +G L   +N         M  + V++D V +   L+A     N  LG+++    L+ 
Sbjct: 480 K--AGRLDEAENF--------MKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQM 529

Query: 361 -SGFYSAVIVGNSLINMYSK 379
             G     I+   L NMY+K
Sbjct: 530 DPGDVGTYIL---LSNMYAK 546



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 4/128 (3%)

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGI-SLVDMYAKCGNIEDAY 648
           P E T  +L K S+    L+ G+ IHA+LI  +  + D  V + SL+++YAKC  I  A 
Sbjct: 24  PLEHTIQLL-KVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVAR 82

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYT 707
           ILF  M  RN V W A++ G   +G   E L+LF+ M     + P+   F  ++S+CS +
Sbjct: 83  ILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDS 142

Query: 708 GLVSEAYE 715
           G V E ++
Sbjct: 143 GQVVEGWQ 150


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 219/620 (35%), Positives = 327/620 (52%), Gaps = 74/620 (11%)

Query: 367 VIVGNSLINMYSKMG-CVCGLRT-----------DQFTLASVLRASSSLPEGLHLSKQIH 414
           ++  N+LI  Y+  G C   LR            D FTL+ V+ A     + + L +Q+H
Sbjct: 106 IVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACG---DDVGLVRQLH 162

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD---GFDLATWNAMIFGYILSN 471
              +       + V+ A++  Y R G + EA  +F       G D  +WNAMI       
Sbjct: 163 CFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +A+ELF  M   G ++D  T+A+ + A  C+  L  G Q H   +KSGF  +  V S
Sbjct: 223 EGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGS 282

Query: 532 GILDMYVKC-GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA---LSIYHQMRLS 587
           G++D+Y KC G MV+ + +F +I APD V W TMISG   +  EDL+   +  + +M+ +
Sbjct: 283 GLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGF--SQYEDLSEDGIWCFREMQHN 340

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF-VGISLVDMYAKCGNIED 646
           G  PD+ +F  +  A S L++   G+Q+HA  IK D   +   V  +LV MY+KCGN+ D
Sbjct: 341 GFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHD 400

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  +F  M   N V  N+M+ G AQHG   E+L+LFE M    + P+++TFI VLSAC +
Sbjct: 401 ARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVH 460

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
           TG V E  + F++M+E++ IEPE EHYS ++D LGRAG+ KEA  +I +MPF   +    
Sbjct: 461 TGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWA 520

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
            LLGACR  G+ E     A + + LEP++++ YV+LSN++A+A +W++  + +  M+ + 
Sbjct: 521 TLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERG 580

Query: 827 VKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL--- 860
           VKK P                          I   +  +++++K+ GYVPD  + L+   
Sbjct: 581 VKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDE 640

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA------------------ 902
           +VE +EKER L YHSEKLA A+GLIST     IL  K                       
Sbjct: 641 EVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREI 700

Query: 903 -----NRFHHLRDGMCPCAD 917
                +RFH  ++G C C D
Sbjct: 701 TVRDTHRFHCFKEGHCSCGD 720



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 237/592 (40%), Gaps = 140/592 (23%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL------------- 104
           ++L+  I+  DL+ GK+ HA    S   P  +L+N+   +YS+CGSL             
Sbjct: 14  NLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYP 73

Query: 105 -VY-----------------ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
            V+                 AR++FD++P  D++S+N+++AAYA  GE          RL
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGE-----CRPALRL 128

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +RE        TL+ ++  C     V     +H + +  G      V+ A++  YS+
Sbjct: 129 FAEVRELRFGLDGFTLSGVIIACGDD--VGLVRQLHCFVVVCGYDCYASVNNAVLACYSR 186

Query: 207 FGKIREAKFLFDGMQE---RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
            G + EA+ +F  M E   RD V W  M+ A  ++  G E   LF ++ R GL  D  ++
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246

Query: 264 QCVLGV---ISDLGKRHEEQVQAYAIKLLLYNNN-------------------------- 294
             VL     + DL      Q     IK   + N+                          
Sbjct: 247 ASVLTAFTCVKDLVGGM--QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEE 304

Query: 295 ---SNVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
               ++VLWN  +SG+ Q  D +   I CF  M  +    D  +F+   +A +   + ++
Sbjct: 305 IAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSV 364

Query: 351 GQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
           G+Q+H   +KS   Y+ V V N+L+ MYSK G V   R          R   ++PE    
Sbjct: 365 GKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDAR----------RVFDTMPE---- 410

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
                                                         ++ + N+MI GY  
Sbjct: 411 ---------------------------------------------HNMVSLNSMIAGYAQ 425

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                ++L LF  M       + IT    + AC     +++G Q +   MK  F ++   
Sbjct: 426 HGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEA 484

Query: 530 S--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLAL 578
              S ++D+  + G + +A+ I   +P  P  + W T++  C  +G  +LA+
Sbjct: 485 EHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAV 536



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 40/246 (16%)

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS----- 548
           T    +KAC     L  GK +HA   KS       +S+    +Y KCG++ +AQ+     
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 549 --------------------------IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
                                     +F++IP PD V++ T+I+   D GE   AL ++ 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAK 640
           ++R      D FT + ++ A  C   +   RQ+H  ++   C  D +  +  +++  Y++
Sbjct: 131 EVRELRFGLDGFTLSGVIIA--CGDDVGLVRQLHCFVVV--CGYDCYASVNNAVLACYSR 186

Query: 641 CGNIEDAYILFKQMDM---RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
            G + +A  +F++M     R+ V WNAM+V   QH  G E ++LF +M   G++ D  T 
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246

Query: 698 IGVLSA 703
             VL+A
Sbjct: 247 ASVLTA 252


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 252/821 (30%), Positives = 398/821 (48%), Gaps = 53/821 (6%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS----ILRHAISTSDLLLGKSTHAR 78
           F       LPS +    P  + +HFSS  S+S   S    +L+       L   K  HA 
Sbjct: 3   FHSHVVNKLPSITT---PLTKNTHFSSFFSTSLQTSNPPNLLQLCTLCDTLSQTKQVHAY 59

Query: 79  ILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSGEG 135
            L    +P    L  +L+  Y+  G    +  LF       R    WN+++ A + +G  
Sbjct: 60  SLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAG-- 117

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
               V +GF  + ++  +       T   +LK+C     V     VHG A K+G   D F
Sbjct: 118 ----VFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVF 173

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL--HR 253
           V   L+  Y   G   +A  +FD M ERD V W  ++   + +GF EE    F  +   +
Sbjct: 174 VGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAK 233

Query: 254 SGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
            G+ PD  +V  VL V ++   K     V  YA+K+ L     +V + N  +  Y + G 
Sbjct: 234 PGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLG--GHVKVGNALVDVYGKCGS 291

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              + + F  +   NV                   ++    I   + +  +  A+ V   
Sbjct: 292 EKASKKVFDEIDERNV-------------------ISWNAIITSFSFRGKYMDALDVFRL 332

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL-HLSKQIHVHAIKNDTVADSFVSTA 431
           +I+         G+R +  T++S+L     L  GL  L  ++H  ++K    +D F+S +
Sbjct: 333 MIDE--------GMRPNSVTISSMLPVLGEL--GLFKLGMEVHGFSLKMAIESDVFISNS 382

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LID+Y ++GS   A  +F      ++ +WNAMI  +  +   ++A+EL   M   GE  +
Sbjct: 383 LIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPN 442

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            +T    + AC  L  L  GK++HA  ++ G  LDL VS+ + DMY KCG +  AQ++FN
Sbjct: 443 NVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN 502

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            I   D+V++  +I G     +   +L ++ +MRL G+ PD  +F  +V A + L  + Q
Sbjct: 503 -ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQ 561

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G++IH  L++    +  FV  SL+D+Y +CG I+ A  +F  +  ++   WN M++G   
Sbjct: 562 GKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGM 621

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
            G  +  + LFE MK  GVE DSV+F+ VLSACS+ GL+ +  + F +M +   IEP   
Sbjct: 622 RGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCD-LNIEPTHT 680

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGRAG  +EA +LI  +      ++  ALLGACR+ G+ E G W AE L  L
Sbjct: 681 HYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFEL 740

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +P     Y+LLSN++A A +WD+    R  MK +  KK+P 
Sbjct: 741 KPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPG 781


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 210/638 (32%), Positives = 334/638 (52%), Gaps = 90/638 (14%)

Query: 364 YSAVIVGNSLIN-------MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           ++ +I G S IN       MY  M     ++ D+FT   +L+  +     L   K +  H
Sbjct: 75  WNTMIKGYSRINHPQNGVSMYLLM-LASNIKPDRFTFPFLLKGFTR-NMALQYGKVLLNH 132

Query: 417 AIKNDTVADSFVSTALIDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
           A+K+   ++ FV  A I ++  CR   +A    +F+  D +++ TWN M+ GY       
Sbjct: 133 AVKHGFDSNLFVQKAFIHMFSLCRLVDLARK--VFDMGDAWEVVTWNIMLSGYNRVKQFK 190

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           K+  LF  M   G   + +T+   + AC  L  L+ GK ++ Y      E +L + + ++
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLI 250

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA----------------- 577
           DM+  CG M +AQS+F+++   D ++WT++++G  + G+ DLA                 
Sbjct: 251 DMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTA 310

Query: 578 --------------LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
                         L+++ +M++S V PDEFT   ++ A + L ALE G  +   + K  
Sbjct: 311 MIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS 370

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             +D FVG +L+DMY KCGN+  A  +FK+M  ++   W AM+VGLA +G+GEE L +F 
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFS 430

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           +M    + PD +T+IGVL AC++ G+V +    F  M  ++GI+P V HY  +VD LGRA
Sbjct: 431 NMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRA 490

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           GR +EA E+I++MP + ++ +  +LLGACRV  + +  +  A++++ LEP + + YVLL 
Sbjct: 491 GRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLC 550

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           NI+AA  +W+++   R  M  + +KK P                       +  I+AK+E
Sbjct: 551 NIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLE 610

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
            +++ + + GY PDT  V LD+ EE+KE ALY HSEKLA AY LIS+ P   I       
Sbjct: 611 NMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLR 670

Query: 894 --------------LSNKEPLYAN--RFHHLRDGMCPC 915
                           N+E +  +  RFHH R G C C
Sbjct: 671 MCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSC 708



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/555 (22%), Positives = 241/555 (43%), Gaps = 88/555 (15%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS--KFGKIREAKFLFDGMQE 222
           LL+ C S   ++  + +H + +K+GL  D      ++      + GK+  A+ +FD + +
Sbjct: 13  LLEKCKS---MYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQ 69

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQV 281
             + +W  M++ Y+     +    +++ +  S + PD  +   +L G   ++  ++ + +
Sbjct: 70  PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVL 129

Query: 282 QAYAIKLLLYNNNSN-------------------------------VVLWNKKLSGYLQV 310
             +A+K   +  +SN                               VV WN  LSGY +V
Sbjct: 130 LNHAVK---HGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRV 186

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
                +   F+ M +  V  +SVT ++ L+A +   +L  G+ I+           +I+ 
Sbjct: 187 KQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE 246

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           N LI+M++     CG   +  ++   ++                      D ++ + + T
Sbjct: 247 NVLIDMFA----ACGEMDEAQSVFDNMK--------------------NRDVISWTSIVT 282

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
              ++    G +  A   F+     D  +W AMI GY+  N   +AL LF  M  S  + 
Sbjct: 283 GFANI----GQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKP 338

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           DE T+ + + AC  L  L+ G+ +  Y  K+  + D  V + ++DMY KCG +  A+ +F
Sbjct: 339 DEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVF 398

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
            ++   D   WT MI G   NG  + AL+++  M  + + PDE T+  ++ A +    +E
Sbjct: 399 KEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVE 458

Query: 611 QGRQ----------IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NT 659
           +G+           I  N+    C         +VD+  + G +E+A+ +   M ++ N+
Sbjct: 459 KGQSFFISMTMQHGIKPNVTHYGC---------MVDLLGRAGRLEEAHEVIVNMPVKPNS 509

Query: 660 VLWNAMLVGLAQHGN 674
           ++W ++L     H N
Sbjct: 510 IVWGSLLGACRVHKN 524



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 164/379 (43%), Gaps = 34/379 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC--RNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           KQIH H IK    +D      +I   C   +G M  A  +F+      L  WN MI GY 
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
             N+    + ++  M  S  + D  T    +K     + L+ GK +  +A+K GF+ +L 
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V    + M+  C  +  A+ +F+   A + V W  M+SG     +   +  ++ +M   G
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG 203

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V P+  T  +++ A S L  LE G+ I+  +       +  +   L+DM+A CG +++A 
Sbjct: 204 VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQ 263

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGE-------------------------------E 677
            +F  M  R+ + W +++ G A  G  +                               E
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L LF +M+   V+PD  T + +L+AC++ G + E  E      +K  I+ +    + L+
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGAL-ELGEWVKTYIDKNSIKNDTFVGNALI 382

Query: 738 DALGRAGRTKEAGELILSM 756
           D   + G   +A ++   M
Sbjct: 383 DMYFKCGNVGKAKKVFKEM 401



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 2/198 (1%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           Q KQ+H++ +K G   D      ++      + G M+ A+ +F+ IP P    W TMI G
Sbjct: 22  QLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKG 81

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
                     +S+Y  M  S + PD FTF  L+K  +   AL+ G+ +  + +K    S+
Sbjct: 82  YSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSN 141

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FV  + + M++ C  ++ A  +F   D    V WN ML G  +    +++  LF +M+ 
Sbjct: 142 LFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201

Query: 688 HGVEPDSVTFIGVLSACS 705
            GV P+SVT + +LSACS
Sbjct: 202 RGVSPNSVTLVLMLSACS 219



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 146/352 (41%), Gaps = 32/352 (9%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  +  F  S + F++      S +S     +L       DL  GK  +  I       +
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERN 242

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN----------- 136
             L N L+ M++ CG +  A+ +FD M +RD+ISW SI+  +A+ G+ +           
Sbjct: 243 LILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPE 302

Query: 137 ---------------AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
                               E   LFR ++ S       T+  +L  C   G +   E V
Sbjct: 303 RDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV 362

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
             Y  K  +  D FV  AL+++Y K G + +AK +F  M  +D   W  M+   A NG G
Sbjct: 363 KTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHG 422

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLW 300
           EE   +F ++  + + PD+ +   VL   +  G    E+ Q++ I + + +    NV  +
Sbjct: 423 EEALAMFSNMIEASITPDEITYIGVLCACTHAGM--VEKGQSFFISMTMQHGIKPNVTHY 480

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              +    + G    A E  VNM    V+ +S+ +   L A     N+ L +
Sbjct: 481 GCMVDLLGRAGRLEEAHEVIVNM---PVKPNSIVWGSLLGACRVHKNVQLAE 529



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/483 (20%), Positives = 192/483 (39%), Gaps = 109/483 (22%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F+    + M+S C  +  AR++FD     ++++WN +L+ Y        +   +   LF 
Sbjct: 143 FVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGY-----NRVKQFKKSKMLFI 197

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV-SGALVNIYSKF 207
            + +     + +TL  +L  C     +   + ++ Y +  G+V    +    L+++++  
Sbjct: 198 EMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLILENVLIDMFAAC 256

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G++ EA+ +FD M+ RDV+ W  ++  +A                              +
Sbjct: 257 GEMDEAQSVFDNMKNRDVISWTSIVTGFAN-----------------------------I 287

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           G I DL +++ +Q+              + V W   + GYL++     A+  F  M  SN
Sbjct: 288 GQI-DLARKYFDQIP-----------ERDYVSWTAMIDGYLRMNRFIEALALFREMQMSN 335

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V+ D  T +  L A A    L LG+ +     K+   +   VGN+LI+MY K G      
Sbjct: 336 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCG------ 389

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                  +V +A     E  H                D F  TA                
Sbjct: 390 -------NVGKAKKVFKEMHH---------------KDKFTWTA---------------- 411

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                          MI G  ++ +  +AL +FS+M  +    DEIT    + AC    M
Sbjct: 412 ---------------MIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGM 456

Query: 508 LKQGKQMH-AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMI 565
           +++G+    +  M+ G + ++     ++D+  + G + +A  +  ++P  P+ + W +++
Sbjct: 457 VEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516

Query: 566 SGC 568
             C
Sbjct: 517 GAC 519



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 7/211 (3%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           D Y  +  F  +L  F +    +         SIL        L LG+     I  +S  
Sbjct: 313 DGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIK 372

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
            D F+ N L+ MY +CG++  A+++F +M  +D  +W +++   A +G G      E   
Sbjct: 373 NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGE-----EALA 427

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH-GYALKIGLVWDEFVSGALVNIY 204
           +F ++ E+      +T   +L  C  +G V   ++      ++ G+  +    G +V++ 
Sbjct: 428 MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLL 487

Query: 205 SKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
            + G++ EA  +   M  + + ++W  +L A
Sbjct: 488 GRAGRLEEAHEVIVNMPVKPNSIVWGSLLGA 518


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 221/683 (32%), Positives = 339/683 (49%), Gaps = 77/683 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA+ +       N+++WN  L G     D    +E +V M+      ++ TF   L + A
Sbjct: 35  YAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCA 94

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     G+QIH   +K G         SLI+MY++ G                      
Sbjct: 95  KSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNG---------------------- 132

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  ++++   + + D V+     TALI  Y   G +  A  +F+     D+ +WNAM
Sbjct: 133 --RLEDARKVFDXSSQRDVVS----CTALITGYASRGDVRSARKVFDXITERDVVSWNAM 186

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-G 522
           I GY+ +    +ALELF  M  +  R DE T+ + + AC     ++ G+++H       G
Sbjct: 187 ITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHG 246

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F   L + +  + +Y KCG +  A  +F  +   D V+W T+I G         AL ++ 
Sbjct: 247 FGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQ 306

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAK 640
           +M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAK
Sbjct: 307 EMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAK 366

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+IE A+ +F  M  ++   WNAM+ G A HG       LF  M+ +G+EPD +T +G+
Sbjct: 367 CGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGL 426

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSACS++GL+      F  + + Y I P++EHY  ++D LG AG  KEA E+I  MP E 
Sbjct: 427 LSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEP 486

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              +  +LL AC++ G+ E  +  A+KLM +EP +S +YVLLSNI+A A +W+DV   R 
Sbjct: 487 DGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIRE 546

Query: 821 EMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDF 857
            +  K +KK P                       +  I+  +E +   ++E G+VPDT  
Sbjct: 547 VLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSE 606

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------K 897
           VL ++EEE KE AL +HSEKLA A+GLIST P +   ++ N                  K
Sbjct: 607 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYK 666

Query: 898 EPLYA---NRFHHLRDGMCPCAD 917
             + A    RFHH RDG+C C D
Sbjct: 667 REIVARDRTRFHHFRDGVCSCCD 689



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 74/349 (21%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA+++      DR+   +L++MY+R G L  AR++FD    RD++S  +++  YA 
Sbjct: 102 GRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYAS 161

Query: 132 SGE------------------------GNAENV--TEGFRLFRSLRESITFTSRLTLAPL 165
            G+                        G  EN    E   LF+ +  +       TL  +
Sbjct: 162 RGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSV 221

Query: 166 LKLCLSSGYVWASETVH---------GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           L  C  SG +     +H         G +LKI          A + +YSK G +  A  L
Sbjct: 222 LSACAQSGSIELGREIHTLVDDHHGFGSSLKI--------VNAFIGLYSKCGDVEIASGL 273

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-- 274
           F+G+  +DVV W  ++  Y      +E   LF ++ RSG  P+D ++  VL   + LG  
Sbjct: 274 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 333

Query: 275 -----------KRHEEQVQAYAIKLLL----------------YNN--NSNVVLWNKKLS 305
                      KR +      A++  L                +N+  + ++  WN  + 
Sbjct: 334 DIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIF 393

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           G+   G  + A + F  M ++ ++ D +T +  L+A + +  L+LG+ I
Sbjct: 394 GFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI 442



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 68/341 (19%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+   + +L+ WN++L   A S      ++     ++  +       +  T  
Sbjct: 33  LPYAVSVFETXQEPNLLIWNTMLRGLASSS-----DLVSPLEMYVRMVSXGHVPNAYTFP 87

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK-------------- 209
            LLK C  S        +H   +K+G   D +   +L+++Y++ G+              
Sbjct: 88  FLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQR 147

Query: 210 -----------------IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
                            +R A+ +FD + ERDVV W  M+  Y EN   EE   LF ++ 
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAY-----AIKLL-----LYN----- 292
           R+ + PD+ ++  VL   +     +LG+     V  +     ++K++     LY+     
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267

Query: 293 ----------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                     +  +VV WN  + GY  +     A+  F  M+RS    + VT L  L A 
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327

Query: 343 AGTDNLNLGQQIHGTTLK--SGFYSAVIVGNSLINMYSKMG 381
           A    +++G+ IH    K   G  +   +  SLI+MY+K G
Sbjct: 328 AHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCG 368


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 225/685 (32%), Positives = 345/685 (50%), Gaps = 80/685 (11%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           +YAI +       N+++WN    G+    D+  A++ +V MI   +  +S +F   L + 
Sbjct: 16  SYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSC 75

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           A +  L  GQQIHG  LK G+   + V  SLI+MY++ G +                   
Sbjct: 76  AKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRL------------------- 116

Query: 403 LPEGLH--LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             E  H    +  H H +           TALI  Y   G +  A  LF+     D+ +W
Sbjct: 117 --EDAHKVFDRSSHRHVVS---------YTALITGYASRGYINNARKLFDEISVKDVVSW 165

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           NAMI GY+ + N  +ALEL+  M  +  + DE T+ T V AC     ++ G+Q+H++   
Sbjct: 166 NAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIED 225

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
            GF  ++ + + ++D+Y KCG +  A  +F  +   D ++W T+I G         AL +
Sbjct: 226 HGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLL 285

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMY 638
           + +M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMY
Sbjct: 286 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMY 345

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG+IE A  +F  M  R+   WNAM+ G A HG       LF  M+ +G++PD +TF+
Sbjct: 346 AKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFV 405

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
           G+LSACS++G++      F  M + Y I P++EHY  ++D LG  G  KEA E+I +MP 
Sbjct: 406 GLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPM 465

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E    +  +LL AC++  + E G+  A+ L+ +EP +  +YVLLSNI+A A +WD V   
Sbjct: 466 EPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKI 525

Query: 819 RGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDT 855
           R  +  K +KK P                          I+  +E +   ++E G+VPDT
Sbjct: 526 RTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDT 585

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN----------------- 896
             VL ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                 
Sbjct: 586 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 645

Query: 897 -KEPLYA---NRFHHLRDGMCPCAD 917
            K  + A    R H L+DG+  C D
Sbjct: 646 YKREIIARDRTRLHLLKDGVWSCHD 670



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 235/517 (45%), Gaps = 104/517 (20%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ + + +L+ WN++   +A     N+++VT   +L+  +       +  +  
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHAL----NSDSVT-ALKLYVCMISLGLLPNSYSFP 69

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S  +   + +HG+ LK+G   D +V+ +L+++Y++ G++ +A  +FD    R
Sbjct: 70  FLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR 129

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
            VV +  ++  YA  G+      LF          D+ SV+                   
Sbjct: 130 HVVSYTALITGYASRGYINNARKLF----------DEISVK------------------- 160

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       +VV WN  +SGY++  +   A+E + +M+++NV+ D  T +  ++A A
Sbjct: 161 ------------DVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACA 208

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---CGL-------------- 386
            + ++ LG+Q+H      GF S + + N LI++YSK G V   CGL              
Sbjct: 209 QSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNT 268

Query: 387 --------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHA--- 417
                                       +  T+ SVL A + L   + + + IHV+    
Sbjct: 269 LIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG-AIDIGRWIHVYINKR 327

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +K  T A S + T+LID+Y + G +  A+ +F++     L++WNAMIFG+ +   ++ A 
Sbjct: 328 LKGVTNASSLL-TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAF 386

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSG 532
           +LFS M  +G   D+IT    + AC    ML  G+ +       Y +    E   C    
Sbjct: 387 DLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGC---- 442

Query: 533 ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           ++D+   CG   +A+ +   +P  PD V W +++  C
Sbjct: 443 MIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKAC 479



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 36/292 (12%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+T Y+  G +  AR+LFD++  +D++SWN++++ Y  +      N  E   L++ + ++
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETC-----NFKEALELYKDMMKT 191

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                  T+  ++  C  SG +     +H +    G   +  +   L+++YSK G++  A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             LF G+ ++DV+ W  ++  +      +E   LF ++ RSG  P+D ++  VL   + L
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311

Query: 274 GKRH-EEQVQAYAIKLLLYNNNSNVVL------------------------------WNK 302
           G       +  Y  K L    N++ +L                              WN 
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            + G+   G  + A + F  M ++ +  D +TF+  L+A + +  L+LG+ I
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 423



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L  +L+ MY++CG +  A+++FD M  R L SWN+++  +A  G+ NA      F LF  
Sbjct: 337 LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANA-----AFDLFSK 391

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVH---GYALKIGLVWDEFVSGALVNIYSK 206
           +R++      +T   LL  C  SG +     +        KI    + +  G ++++   
Sbjct: 392 MRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY--GCMIDLLGH 449

Query: 207 FGKIREAKFLFDGM-QERDVVLWKVMLRA 234
            G  +EAK +   M  E D V+W  +L+A
Sbjct: 450 CGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 220/714 (30%), Positives = 348/714 (48%), Gaps = 91/714 (12%)

Query: 293  NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
            +++ V LWN  +S Y ++GD   +I  F  M +  +  +S TF   L   A    +   +
Sbjct: 514  SDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECK 573

Query: 353  QIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CVCG- 385
            +IHG   K GF S   V NSLI  Y K G                          CV   
Sbjct: 574  RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633

Query: 386  --------------LRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                          LR   D  TL + + A +++   L L + +H   +K     +   +
Sbjct: 634  FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS-LSLGRALHGQGVKACFSREVMFN 692

Query: 430  TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
              L+D+Y + G++ +A   FE      + +W ++I  Y+       A+ LF  M + G  
Sbjct: 693  NTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752

Query: 490  LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
             D  ++ + + AC C   L +G+ +H Y  K+   L L VS+ ++DMY KCG+M +A  +
Sbjct: 753  PDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812

Query: 550  FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
            F+ IP  D V+W TMI G   N   + AL ++ +M+     PD  T A L+ A   L AL
Sbjct: 813  FSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR-PDGITMACLLPACGSLAAL 871

Query: 610  EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
            E GR IH  +++   SS+  V  +L+DMY KCG++  A +LF  +  ++ + W  M+ G 
Sbjct: 872  EIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGC 931

Query: 670  AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
              HG G E +  F+ M+  G++PD +TF  +L ACS++GL++E +  F+ M  +  +EP+
Sbjct: 932  GMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPK 991

Query: 730  VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            +EHY+ +VD L R G   +A  LI +MP +  A++  ALL  CR+  D E  + VAE + 
Sbjct: 992  LEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF 1051

Query: 790  ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
             LEP ++  YVLL+NI+A A +W++V   R  + ++ +KK P                  
Sbjct: 1052 ELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSAD 1111

Query: 832  -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                 A  IF+ +  L  ++K  G+ P   + L++  + EKE AL  HSEKLA A+G+++
Sbjct: 1112 TAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILN 1171

Query: 887  TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
             P    I                      + +E +   +NRFHH +DG C C D
Sbjct: 1172 LPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRD 1225



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 238/520 (45%), Gaps = 50/520 (9%)

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N K+  + +VGD   A+E      +S +  ++ + ++ L A      L  G+ +H     
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKC--LQEGKMVHSVISS 479

Query: 361 SGFYSAVIVGNSLINMYSKMGCV------------------------------------- 383
           +G     ++G  L+ MY   G +                                     
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539

Query: 384 -------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                   G+  + +T + +L+  ++L   +   K+IH    K    + + V  +LI  Y
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGR-VGECKRIHGCVYKLGFGSYNTVVNSLIATY 598

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            ++G +  A  LF+     D+ +WN+MI G +++  SH ALE F  M      +D  T+ 
Sbjct: 599 FKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLV 658

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
            +V AC  +  L  G+ +H   +K+ F  ++  ++ +LDMY KCG + DA   F  +   
Sbjct: 659 NSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQK 718

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
             V+WT++I+  V  G  D A+ ++++M   GV PD ++   ++ A +C  +L++GR +H
Sbjct: 719 TVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVH 778

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             + K + +    V  +L+DMYAKCG++E+AY++F Q+ +++ V WN M+ G +++    
Sbjct: 779 NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPN 838

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E LKLF +M+     PD +T   +L AC     + E     H    + G   E+   + L
Sbjct: 839 EALKLFAEMQKES-RPDGITMACLLPACGSLAAL-EIGRGIHGCILRNGYSSELHVANAL 896

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           +D   + G    A  L+  M  E        ++  C + G
Sbjct: 897 IDMYVKCGSLVHA-RLLFDMIPEKDLITWTVMISGCGMHG 935



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 165/642 (25%), Positives = 272/642 (42%), Gaps = 90/642 (14%)

Query: 35   SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNN 93
            ++ LL   QKS    ++ SS    IL+       L  GK  H+ +++S+ IP +  L   
Sbjct: 437  AVELLRMSQKSELDLNAYSS----ILQLCAEHKCLQEGKMVHS-VISSNGIPIEGVLGAK 491

Query: 94   LMTMYSRCGSLVYARRLFDK-MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
            L+ MY  CG+L   RR+FD  + D  +  WN +++ YA  G+       E   LF+ +++
Sbjct: 492  LVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGD-----YRESIYLFKKMQK 546

Query: 153  SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                 +  T + +LK   + G V   + +HG   K+G      V  +L+  Y K G++  
Sbjct: 547  LGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDS 606

Query: 213  AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL--HRSG--LCPDDESVQCVLG 268
            A  LFD + +RDVV W  M+     NGF       FV +   R G  L     SV     
Sbjct: 607  AHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACAN 666

Query: 269  VIS-DLGKR-HEEQVQAYAIKLLLYNN-----------------------NSNVVLWNKK 303
            V S  LG+  H + V+A   + +++NN                          VV W   
Sbjct: 667  VGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSL 726

Query: 304  LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
            ++ Y++ G    AI  F  M    V  D  +    L A A  ++L+ G+ +H    K+  
Sbjct: 727  IAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNM 786

Query: 364  YSAVIVGNSLINMYSKMGC----------------------VCGL--------------- 386
               + V N+L++MY+K G                       + G                
Sbjct: 787  ALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAE 846

Query: 387  -----RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
                 R D  T+A +L A  SL   L + + IH   ++N   ++  V+ ALID+Y + GS
Sbjct: 847  MQKESRPDGITMACLLPACGSLA-ALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGS 905

Query: 442  MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
            +  A  LF+     DL TW  MI G  +    ++A+  F  M  +G + DEIT  + + A
Sbjct: 906  LVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYA 965

Query: 502  CGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
            C    +L +G    ++   +   E  L   + ++D+  + G +  A ++   +P  PD  
Sbjct: 966  CSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDAT 1025

Query: 560  AWTTMISGCVDNGEEDLALSIY-HQMRLSGVVPDEFTFAILV 600
             W  ++ GC  + + +LA  +  H   L    PD   + +L+
Sbjct: 1026 IWGALLCGCRIHHDVELAEKVAEHVFELE---PDNAGYYVLL 1064


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 213/688 (30%), Positives = 366/688 (53%), Gaps = 24/688 (3%)

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
            + C+    +  ++++H + +K G     F+   ++++YSK   I +A+ +FD M  R++
Sbjct: 10  FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE----SVQCVLGVISDLGKRHEEQV 281
           V W  M+     +    E   L+ ++  S +   ++    +V    G++ ++        
Sbjct: 70  VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHY 129

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
             +  KL     + ++VL N  L  Y++ G    A   F  +   N    +   L     
Sbjct: 130 HIFQAKL-----DVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQ 184

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVG-----NSLINMYSKMGCVCGLRTDQFTLASV 396
               D + L  ++    + S  ++++I G     +S    +  M    GL+ D+FT  SV
Sbjct: 185 GLIDDAMKLFDKMPEPDIVS--WNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSV 242

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE-----N 451
           L+A     E L L ++IH + IK+   +  +  +ALID+Y     ++EA  +F+     +
Sbjct: 243 LKACGCSDE-LMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNS 301

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
                LA WN+M+ G++++ +  +AL + SHMH SG R D  T +  +K C     L   
Sbjct: 302 SVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLA 361

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
            Q+H + + SG+ELD  V S ++D+Y K G++ +A  +F  +P  D VAW+++I+GC   
Sbjct: 362 SQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARF 421

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G + LA S++  M   G+  D F  +I++KA S L + + G+Q+H+  +K    S+  V 
Sbjct: 422 GSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVT 481

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +L+DMYAKCG+IEDA  LF  +   +T+ W +++VG AQ+G  EE + L   M   G +
Sbjct: 482 TALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTK 541

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+ +T +GVL+AC ++GLV EA++ F+ +   +G+ P  EHY+ +VD LG+AGR +EA +
Sbjct: 542 PNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVK 601

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           LI  MPF+   ++  +LLGAC    + +    VAE L+A  P D S Y++LSN++AA   
Sbjct: 602 LISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGM 661

Query: 812 WDDVTSARGEMKRKNVKKDPADLIFAKV 839
           WD V+  R  +K+  + K  A  IF ++
Sbjct: 662 WDSVSKVRETVKK--IGKKRAGKIFYEI 687



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 156/629 (24%), Positives = 276/629 (43%), Gaps = 118/629 (18%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
            R+ I    +   KS H+ I+ S      F+ NN++++YS+C S++ AR +FD+MP R++
Sbjct: 10  FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES-ITFTSRLTLAPLLKLCLSSGYVWAS 178
           +SW ++++   +S   +     E   L+  + ES I   ++   + +LK C     V   
Sbjct: 70  VSWTTMVSVLTNSSMPH-----EALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELG 124

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + VH +  +  L  D  +  AL+++Y K G +R+A+ +F  +  ++   W  ++  YA+ 
Sbjct: 125 KMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQ 184

Query: 239 GFGEEVFHLF------------------VD------------LHRSGLCPDDESVQCVLG 268
           G  ++   LF                  VD            +H  GL  D+ +   VL 
Sbjct: 185 GLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLK 244

Query: 269 V--ISD---LGK-------RHEEQVQAYAIKLLL------------------YNNNSNV- 297
               SD   LG+       +   +   Y I  L+                  Y  NS+V 
Sbjct: 245 ACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVS 304

Query: 298 ---VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
               LWN  LSG++  GD   A+    +M RS V++D  TF + L      DNL+L  Q+
Sbjct: 305 ESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQV 364

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------- 383
           HG  + SG+    +VG+ LI++Y+K G +                               
Sbjct: 365 HGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSD 424

Query: 384 ------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        GL+ D F ++ VL+A SSL    H  KQ+H   +K    ++  V+TA
Sbjct: 425 KLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQH-GKQVHSLCLKKGYESEGVVTTA 483

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LID+Y + G + +A  LF      D  +W ++I G   +  + +A+ L   M  SG + +
Sbjct: 484 LIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPN 543

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSI 549
           +ITI   + AC    ++++   +   ++++   L  C    + ++D+  + G   +A  +
Sbjct: 544 KITILGVLTACRHSGLVEEAWDVFN-SIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKL 602

Query: 550 FNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            +++P  PD   W++++  C      DLA
Sbjct: 603 ISEMPFKPDKTIWSSLLGACGTYKNRDLA 631



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 130/220 (59%), Gaps = 10/220 (4%)

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           I  A + C     +K  K +H++ +KSGF   + + + ++ +Y KC +++DA+++F+++P
Sbjct: 6   IQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMP 65

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGR 613
             + V+WTTM+S   ++     ALS+Y++M  S +  P++F ++ ++KA   +  +E G+
Sbjct: 66  HRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGK 125

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            +H ++ +     D  +  +L+DMY KCG++ DA  +F ++  +N   WN +++G A+ G
Sbjct: 126 MVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQG 185

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
             ++ +KLF+ M     EPD V++  +++     GLV  A
Sbjct: 186 LIDDAMKLFDKMP----EPDIVSWNSIIA-----GLVDNA 216



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 14/269 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+    + +L+LG+  H  I+ S      +  + L+ MYS C  L  A ++FD+    
Sbjct: 241 SVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRN 300

Query: 118 DLIS-----WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
             +S     WNS+L+ +  +G+       E   +   +  S       T + +LK+C++ 
Sbjct: 301 SSVSESLALWNSMLSGHVVNGD-----YVEALSMISHMHRSGVRFDFYTFSIVLKICMNF 355

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +  +  VHG+ +  G   D  V   L++IY+K G I  A  LF+ + ++DVV W  ++
Sbjct: 356 DNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLI 415

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLY 291
              A  G  +  F LF+D+   GL  D   +  VL   S L   +H +QV +  +K    
Sbjct: 416 TGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLK---K 472

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
              S  V+    +  Y + GD   A+  F
Sbjct: 473 GYESEGVVTTALIDMYAKCGDIEDALSLF 501



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 10/224 (4%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+  ++  +L L    H  ++ S    D  + + L+ +Y++ GS+  A RLF+++PD+D
Sbjct: 348 VLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKD 407

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           +++W+S++   A  G          F LF  +           ++ +LK C S       
Sbjct: 408 VVAWSSLITGCARFGSDKL-----AFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHG 462

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + VH   LK G   +  V+ AL+++Y+K G I +A  LF  + E D + W  ++   A+N
Sbjct: 463 KQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQN 522

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           G  EE   L   +  SG  P+  +   +LGV++    RH   V+
Sbjct: 523 GRAEEAISLLHKMIESGTKPNKIT---ILGVLT--ACRHSGLVE 561


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 226/676 (33%), Positives = 362/676 (53%), Gaps = 80/676 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV W+  ++ +   G    AI+ FV  +   +  +   +   + A + +D + +G+ I 
Sbjct: 130 DVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVIL 189

Query: 356 GTTLKSG-FYSAVIVGNSLINMYSK--------------------------------MG- 381
           G  +K+G F S V VG SLI+M+ K                                MG 
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249

Query: 382 -----------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                       + G  +D+FTL+SV  A + L E L L +Q+H  AI++    D  V  
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAEL-ENLSLGRQLHSWAIRSGLADD--VEC 306

Query: 431 ALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-SHKALELFSHMHTS 486
           +L+D+Y +   +GS+ +   +F+      + +W A+I GY+ + N + +A+ LFS M T 
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQ 366

Query: 487 GE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
           G    +  T ++A KACG +   + GKQ+  +A K G   +  VS+ ++ M+VKC  M D
Sbjct: 367 GHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMED 426

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A++ F  +   + V++ T + G   N + + A  +  ++    +    FTFA L+   + 
Sbjct: 427 ARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVAN 486

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           + +L +G QIH+ ++KL  S +  V  +L+ MY+KCG+I+ A  +F  MD RN + W +M
Sbjct: 487 VGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSM 546

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G A+HG  E  L+ F  M   GV+P+ VT++ +LSACS+ GLVSE + +F+ M E + 
Sbjct: 547 ITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I+P++EHY+ +VD L RAG   +A E I +MPF+A   + R  LGACRV  +TE GK  A
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD--------------- 830
            K++  +P + +AY+ LSNI+A+A +W++ T  R +MK +N+ K+               
Sbjct: 667 RKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKF 726

Query: 831 --------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA----LYYHSEKL 878
                    A  I+ +++ LI  IK  GYVPDTD VL  +EEE+ E      LY HSEK+
Sbjct: 727 YVGDTSHPNAHQIYDELDWLITEIKRCGYVPDTDLVLHKLEEEDDEAKKEMLLYQHSEKI 786

Query: 879 ARAYGLISTPPSSVIL 894
           A A+GLIST  S  ++
Sbjct: 787 AVAFGLISTAKSRPMI 802



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 146/609 (23%), Positives = 266/609 (43%), Gaps = 85/609 (13%)

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           R+ I     +T + LLK C+ + +    + VH   ++  +  D  +  +L+++YSK G +
Sbjct: 54  RDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDL 113

Query: 211 REAKFLFDGM---QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            +AK +F+ M    +RDVV W  M+  +  NG   +   LFV+    GL P+D     V+
Sbjct: 114 TKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVI 173

Query: 268 GVISD--------------LGKRHEEQ---VQAYAIKLLLYNNNS--------------N 296
              S+              +   H E    V    I + +   NS              N
Sbjct: 174 RACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VV W   ++  +Q+G    AI  F++M+ S  + D  T     +A A  +NL+LG+Q+H 
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHS 293

Query: 357 TTLKSGF--------------------------------------YSAVIVG-------- 370
             ++SG                                       ++A+I G        
Sbjct: 294 WAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLA 353

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
              IN++S+M     +  + FT +S  +A  ++ +   + KQ+  HA K    ++S VS 
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDP-RVGKQVLGHAFKRGLASNSSVSN 412

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ++I ++ +   M +A   FE+    +L ++N  + G   + +   A EL S +      +
Sbjct: 413 SVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGV 472

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
              T A+ +     +  L++G+Q+H+  +K G   +  V + ++ MY KCG++  A  +F
Sbjct: 473 SAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   + ++WT+MI+G   +G  +  L  ++QM   GV P+E T+  ++ A S +  + 
Sbjct: 533 SLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVS 592

Query: 611 QGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAMLV 667
           +G + H N +  D    P +     +VD+  + G + DA+     M  +  VL W   L 
Sbjct: 593 EGWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651

Query: 668 GLAQHGNGE 676
               H N E
Sbjct: 652 ACRVHSNTE 660



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 164/739 (22%), Positives = 294/739 (39%), Gaps = 148/739 (20%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM--- 114
           S+L+  I      LGK  HAR++     PD  L N+L+++YS+ G L  A+ +F+ M   
Sbjct: 67  SLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRF 126

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             RD++SW++++A + ++G        +  +LF    E     +      +++ C +S +
Sbjct: 127 GKRDVVSWSAMMACFGNNGRE-----FDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDF 181

Query: 175 VWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKF-LFDGMQERDVVLWKVML 232
           V     + G+ +K G    D  V  +L++++ K     E  + +FD M E +VV W +M+
Sbjct: 182 VGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLY 291
               + GF  E    F+D+  SG   D  ++  V    ++L       Q+ ++AI+  L 
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLA 301

Query: 292 NN-----------------------------NSNVVLWNKKLSGYLQVGD-NHGAIECFV 321
           ++                             + +V+ W   ++GY+Q  +    AI  F 
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFS 361

Query: 322 NMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            MI + +V+ +  TF  A  A     +  +G+Q+ G   K G  S   V NS+I+M+ K 
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKC 421

Query: 381 GCVCGLRT-------------------------------------------DQFTLASVL 397
             +   RT                                             FT AS+L
Sbjct: 422 DRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLL 481

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
              +++   L   +QIH   +K     +  V  ALI +Y + GS+  A  +F   D  ++
Sbjct: 482 SGVANV-GSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNV 540

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----K 512
            +W +MI G+     + + LE F+ M   G + +E+T    + AC  + ++ +G      
Sbjct: 541 ISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDN 571
               + +K   E   C    ++D+  + G + DA    N +P   DV  W T +  C  +
Sbjct: 601 MYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              +L                                   G+     +++ D  ++P   
Sbjct: 657 SNTEL-----------------------------------GKLAARKILEFD-PNEPAAY 680

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-----W-------NAMLVGLAQHGNGEETL 679
           I L ++YA  G  E++  + ++M  RN V      W       +   VG   H N  +  
Sbjct: 681 IQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIY 740

Query: 680 K----LFEDMKAHGVEPDS 694
                L  ++K  G  PD+
Sbjct: 741 DELDWLITEIKRCGYVPDT 759



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 218/500 (43%), Gaps = 58/500 (11%)

Query: 307 YLQVGDNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           +L  GD  GA+     M R  ++  DSVTF   L +     +  LG+ +H   ++     
Sbjct: 36  HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEP 95

Query: 366 AVIVGNSLINMYSK----------------------------MGCV-------------- 383
             ++ NSLI++YSK                            M C               
Sbjct: 96  DSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFV 155

Query: 384 ----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCR 438
                GL  + +   +V+RA S+  + + + + I    +K     +D  V  +LID++ +
Sbjct: 156 EFLEMGLVPNDYCYTAVIRACSN-SDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 439 NGSMAEAEY-LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
             +  E  Y +F+     ++ TW  MI   +      +A+  F  M  SG   D+ T+++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---GAMVDAQSIFNDIP 554
              AC  L  L  G+Q+H++A++SG   D  V   ++DMY KC   G++ D + +F+ + 
Sbjct: 275 VFSACAELENLSLGRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQ 332

Query: 555 APDDVAWTTMISGCVDNGE-EDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQG 612
               ++WT +I+G + N      A++++ +M   G V P+ FTF+   KA   ++    G
Sbjct: 333 DHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVG 392

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +Q+  +  K   +S+  V  S++ M+ KC  +EDA   F+ +  +N V +N  L G  ++
Sbjct: 393 KQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRN 452

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
            + E   +L  ++    +   + TF  +LS  +  G + +  E  H    K G+      
Sbjct: 453 LDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKG-EQIHSQVLKLGLSCNQPV 511

Query: 733 YSFLVDALGRAGRTKEAGEL 752
            + L+    + G    A  +
Sbjct: 512 CNALISMYSKCGSIDTASRV 531


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 215/657 (32%), Positives = 348/657 (52%), Gaps = 42/657 (6%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H  AL+ G + D F    LV  Y+  GK  +A+ +FD M ERDVV W  ++ A+  NG 
Sbjct: 141 LHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGM 200

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ----VQAYAIKLLLYNNNSN 296
             +     V + RSG      +V  ++ V+   G   EE+    + A A+K+ L   N+ 
Sbjct: 201 FHDARRALVSMMRSGF---PLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGL---NTM 254

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           V L N  +  Y + GD   +++ F  M+  N V ++S                       
Sbjct: 255 VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAI--------------------- 293

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
           G  L +GFY  V+       M+ KM     +     TL+S+L A   L     L +++H 
Sbjct: 294 GCFLNAGFYGDVL------RMFRKMS-EHNVMPGSITLSSLLPALVELGS-FDLGREVHG 345

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           ++IK     D FV+ +L+D+Y + GS+ +A  +FE     ++ +WNAMI   + +    +
Sbjct: 346 YSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETE 405

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A  L + M  SGE  + IT+   + AC  +  LK GKQ+HA++++ G   DL +S+ ++D
Sbjct: 406 AFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALID 465

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG +  A++IF +    DDV++ T+I G   +     +L ++ QMR  G+  D  +
Sbjct: 466 MYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVS 524

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F   + A + L+  + G++IH  L++   S  PF+  SL+D+Y K G +  A  +F ++ 
Sbjct: 525 FMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKIT 584

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++   WN M++G   HG  +   +LFE MK  G++ D V++I VL+ACS+ GLV +  +
Sbjct: 585 KKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKK 644

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  M  +  IEP+  HY+ +VD LGRAG+  +  E+I  MPF A++ +  ALLGACR+ 
Sbjct: 645 YFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIH 703

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           G+ E  +W AE L  L+P  S  Y L+ N++A   +W++    R  MK + V+K+PA
Sbjct: 704 GNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPA 760



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 155/294 (52%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H  A++   +AD F    L+  Y   G   +A  +F+     D+ +WN+++  ++++ 
Sbjct: 140 ELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNG 199

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
             H A      M  SG  L+  ++ + V ACG     K G  +HA A+K G    + +++
Sbjct: 200 MFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLAN 259

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY K G +  +  +F+ +   ++V+W + I   ++ G     L ++ +M    V+P
Sbjct: 260 ALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMP 319

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
              T + L+ A   L + + GR++H   IK     D FV  SLVDMYAK G++E A  +F
Sbjct: 320 GSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIF 379

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +QM  RN V WNAM+  L Q+G   E  +L  DM+  G  P+S+T + VL AC+
Sbjct: 380 EQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACA 433



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 216/453 (47%), Gaps = 49/453 (10%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL--NLGQQIHG 356
           LWN              A+  +  M+RS V+ D  TF  AL A A       + G ++H 
Sbjct: 84  LWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHA 143

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQF----------------------- 391
           + L+ G  + V  GN+L+  Y+  G  C  R   D+                        
Sbjct: 144 SALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHD 203

Query: 392 ---TLASVLRAS---------SSLP-------EGLHLSKQIHVHAIKNDTVADSFVSTAL 432
               L S++R+          S +P       E   LS  IH  A+K        ++ AL
Sbjct: 204 ARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLS--IHALAVKVGLNTMVNLANAL 261

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D+Y + G +  +  +F+     +  +WN+ I  ++ +      L +F  M         
Sbjct: 262 VDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGS 321

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           IT+++ + A   L     G+++H Y++K   +LD+ V++ ++DMY K G++  A +IF  
Sbjct: 322 ITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQ 381

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +   + V+W  MI+  V NG E  A  +   M+ SG  P+  T   ++ A + + +L+ G
Sbjct: 382 MKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMG 441

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +QIHA  I+     D F+  +L+DMY+KCG +  A  +F++ + ++ V +N +++G +Q 
Sbjct: 442 KQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSE-KDDVSYNTLILGYSQS 500

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
               E+L LF+ M++ G++ D+V+F+G LSAC+
Sbjct: 501 PWCFESLLLFKQMRSVGIDYDAVSFMGALSACT 533



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 35/313 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   +      LG+  H   +  +   D F+ N+L+ MY++ GSL  A  +F++M DR
Sbjct: 326 SLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR 385

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SWN+++A    +G   AE  TE FRL   +++S    + +TL  +L  C     +  
Sbjct: 386 NVVSWNAMIANLVQNG---AE--TEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKM 440

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H ++++ GL++D F+S AL+++YSK G++  A+ +F+   E+D V +  ++  Y++
Sbjct: 441 GKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE-RSEKDDVSYNTLILGYSQ 499

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLL----YN 292
           + +  E   LF  +   G+  D  S    L   ++L   +H +++    ++ LL    + 
Sbjct: 500 SPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFL 559

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +NS                        +V  WN  + GY   G    A E F  M    +
Sbjct: 560 SNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGL 619

Query: 329 QYDSVTFLVALAA 341
            YD V+++  LAA
Sbjct: 620 DYDHVSYIAVLAA 632



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y   P    SLL F Q         +  +   L    + S    GK  H  ++       
Sbjct: 497 YSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGH 556

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            FL+N+L+ +Y++ G LV A ++F+K+  +D+ SWN+++  Y   G+     +   F LF
Sbjct: 557 PFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQ-----IDIAFELF 611

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYV 175
             ++        ++   +L  C   G V
Sbjct: 612 ELMKGDGLDYDHVSYIAVLAACSHGGLV 639


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 218/729 (29%), Positives = 361/729 (49%), Gaps = 96/729 (13%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL    +  +V+ +N  +SGY  +G  H AI  F     + ++ D  ++   L+A   
Sbjct: 63  AQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ 122

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
             +  LG+ IHG  +  G    V + N LI+MY K   +                     
Sbjct: 123 IKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSL 182

Query: 384 ----------------------CGLRTDQFTLASVLRASS-SLPEGLHLSKQIHVHAIKN 420
                                  GLR + FTL S L++   +L   +   K +H + +K 
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQ 242

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-----SHK 475
               D  V TAL+D+Y + G + +A  LF      ++  +NAMI G+I + +     +++
Sbjct: 243 GLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYE 302

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL+LFS M   G +  + T ++ +K C  +   + GKQ+HA+  K   + D  + S +++
Sbjct: 303 ALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIE 362

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y   G+  D    FN  P  D V+WTTMI+G   NG+ + AL++++++  SG  PDEF 
Sbjct: 363 LYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFI 422

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
              ++ A + + A   G Q+H   +K    +   V  S + MYAK GN++ A I F+++ 
Sbjct: 423 ITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK 482

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             + V W+ M+   AQHG+ ++ + LFE MK++G+ P+ +TF+GVL+ACS+ GLV E   
Sbjct: 483 NPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLR 542

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            +  M++ Y ++  V+H + +VD L RAGR  +A   IL+  F     M R LL  CR+ 
Sbjct: 543 YYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIY 602

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---- 831
            D  TGK VAEKL+ L+P +SS+YVLL NI+  A      T  R  MK + ++K+P    
Sbjct: 603 KDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSW 662

Query: 832 -------------------ADLIFAKVEGLIKRIKEGGYV-PDTDFVLLDVEEEEKERAL 871
                              + +I+ K+EG++++ ++ GY+      V +  +E +    +
Sbjct: 663 IEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLGV 722

Query: 872 YYHSEKLARAYGLISTPPSS---------------------VILSNKEPLYAN--RFHHL 908
            +HSEKLA ++G++S PPS+                      ++  +E +  +  RFHH 
Sbjct: 723 NHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHF 782

Query: 909 RDGMCPCAD 917
           ++G C C D
Sbjct: 783 KEGSCSCND 791



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 147/621 (23%), Positives = 267/621 (42%), Gaps = 105/621 (16%)

Query: 31  LPS-FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           +PS F L  + + +   FSS S SS               + GK  HA ++ ++  P  F
Sbjct: 1   MPSVFPLDSVAYTKLVQFSSKSGSS---------------IHGKLAHAHMIKTAFNPCLF 45

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L NN + +YS+ G +  A++LFD+M +R +IS+N +++ Y     G      +   LF  
Sbjct: 46  LLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGY-----GGMGFYHKAIGLFSE 100

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
            R +     + + A +L  C         + +HG A+  GL    F++  L+++Y K  +
Sbjct: 101 ARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCER 160

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----Q 264
           I  A+ LF+   E D V W  ++  YA  G  EE+  L V +H +GL  +  ++      
Sbjct: 161 IDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKS 220

Query: 265 CVLGV--ISDLGKR-HEEQVQ-----------------------AYAIKLLLYNNNSNVV 298
           C L +  +   GK  H   V+                         AI+L   + N NVV
Sbjct: 221 CYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVV 280

Query: 299 LWNKKLSGYLQVGD-----NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           ++N  ++G++Q  D      + A++ F  M R  ++    TF   +      +    G+Q
Sbjct: 281 MYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQ 340

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           IH    K    S   +G++LI +YS +G                                
Sbjct: 341 IHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQ 400

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G + D+F + ++L A + +       +Q+H +A+K      + V  
Sbjct: 401 FESALALFYELLASGKKPDEFIITTMLSACADVA-AERSGEQVHGYAVKTGIGTLAIVQN 459

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           + I +Y ++G++  A+  FE     D+ +W+ MI       ++  A+ LF  M + G   
Sbjct: 460 SQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHP 519

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQS 548
           ++IT    + AC    ++++G + +  +MK  +++ + V   + I+D+  + G ++DA++
Sbjct: 520 NQITFLGVLTACSHGGLVEEGLRYYE-SMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKN 578

Query: 549 -IFNDIPAPDDVAWTTMISGC 568
            I N       V W T++SGC
Sbjct: 579 FILNSGFGDHPVMWRTLLSGC 599



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 179/381 (46%), Gaps = 19/381 (4%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D      +++ SS     +H  K  H H IK       F+    +++Y + G M  A+ L
Sbjct: 8   DSVAYTKLVQFSSKSGSSIH-GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+      + ++N +I GY      HKA+ LFS    +  +LD+ + A  + ACG +   
Sbjct: 67  FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             GK +H  A+  G    + +++ ++DMY KC  +  A+ +F      D+V+W ++I+G 
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ----GRQIHANLIKLDC 624
              G  +  L +  +M  +G+  + FT    +K  SC   L      G+ +H   +K   
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALK--SCYLNLNNMVSYGKTLHGYTVKQGL 244

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN-----GEETL 679
             D  VG +L+DMYAK G + DA  LF+    +N V++NAM+ G  Q  +       E L
Sbjct: 245 DLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEAL 304

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE---NFHLMREKYGIEPEVEHYSFL 736
           KLF  M+  G++P   TF  ++  C++     EA+E     H    K+ I+ +    S L
Sbjct: 305 KLFSQMQRQGIKPSDFTFSSIIKICNHI----EAFEYGKQIHAHICKHNIQSDEFIGSTL 360

Query: 737 VDALGRAGRTKEAGELILSMP 757
           ++     G T++  +   S P
Sbjct: 361 IELYSLLGSTEDQLKCFNSTP 381



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 13/271 (4%)

Query: 24  TKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSS 83
           T+D  +     +L L   +Q+     S  +  + SI++          GK  HA I   +
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFT--FSSIIKICNHIEAFEYGKQIHAHICKHN 349

Query: 84  QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEG 143
              D F+ + L+ +YS  GS     + F+  P  D++SW +++A YA +G+         
Sbjct: 350 IQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQ-----FESA 404

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
             LF  L  S        +  +L  C       + E VHGYA+K G+     V  + +++
Sbjct: 405 LALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISM 464

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y+K G +  AK  F+ ++  DVV W VM+ + A++G  ++  +LF  +   G+ P+  + 
Sbjct: 465 YAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITF 524

Query: 264 QCVL------GVISDLGKRHEEQVQAYAIKL 288
             VL      G++ +  + +E   + Y +K+
Sbjct: 525 LGVLTACSHGGLVEEGLRYYESMKKDYDMKI 555



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 131/264 (49%), Gaps = 4/264 (1%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            GK  HA+ +K+ F   L + +  L++Y K G M +AQ +F+ +     +++  +ISG  
Sbjct: 27  HGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYG 86

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
             G    A+ ++ + R++ +  D+F++A ++ A   +     G+ IH   I        F
Sbjct: 87  GMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVF 146

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +   L+DMY KC  I+ A +LF+  D  + V WN+++ G A+ G  EE LKL   M   G
Sbjct: 147 LTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTG 206

Query: 690 VEPDSVTFIGVLSAC--SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
           +  ++ T    L +C  +   +VS   +  H    K G++ ++   + L+D   + G   
Sbjct: 207 LRLNAFTLGSALKSCYLNLNNMVSYG-KTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLG 265

Query: 748 EAGELILSMPFEASASMHRALLGA 771
           +A +L  + P + +  M+ A++  
Sbjct: 266 DAIQLFRTSPNQ-NVVMYNAMIAG 288


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 188/554 (33%), Positives = 308/554 (55%), Gaps = 47/554 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++ IH H   +      F+  +LI +YC+ G++A+A  +F+     D+ +W ++I GY  
Sbjct: 83  ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++   +AL L   M     + +  T A+ +KA G       G+Q+HA  +K  +  D+ V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S +LDMY +CG M  A ++F+ + + + V+W  +I+G    G+ +  L ++ +M+ +G 
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FT++ +  A + + ALEQG+ +HA++IK       FVG +++DMYAK G++ DA  
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++D ++ V WN+ML   AQ+G G E +  FE+M+  GV  + +TF+ +L+ACS+ GL
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E  + F +M+E Y +EPE++HY  +VD LGRAG   +A   I  MP + +A++  ALL
Sbjct: 383 VKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           G+CR+  + + G++ A+ +  L+P D+   VLL NI+A+  QWD     R  MK   VKK
Sbjct: 442 GSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKK 501

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           +PA                       + I+ K E +  +I++ GYVP+TD+VLL V+E+E
Sbjct: 502 EPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQE 561

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--AN 903
           ++  L YHSEK+A A+ LI+ P  + I                     +  +E +    N
Sbjct: 562 RQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTN 621

Query: 904 RFHHLRDGMCPCAD 917
           RFHH   G C C D
Sbjct: 622 RFHHFSSGSCSCGD 635



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 123/215 (57%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L   + +HA+   S F   + + + ++ +Y KCGA+ DA+ +F+ +PA D 
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            +WT++I+G   N   D AL +   M      P+ FTFA L+KA+    +   G QIHA 
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K D   D +VG +L+DMYA+CG ++ A  +F Q++ +N V WNA++ G A+ G+GE T
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           L +F +M+ +G E    T+  V SA +  G + + 
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 285



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 47/383 (12%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR----------- 387
           + A A   +L+  + IH     S F  +V + NSLI++Y K G V   R           
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 388 --------------------------------TDQFTLASVLRAS-SSLPEGLHLSKQIH 414
                                            + FT AS+L+A+ +S   G+   +QIH
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGI--GEQIH 188

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K D   D +V +AL+D+Y R G M  A  +F+  +  +  +WNA+I G+    +  
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
             L +F+ M  +G      T ++   A   +  L+QGK +HA+ +KSG  L   V + IL
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY K G+M+DA+ +F+ +   D V W +M++     G    A++ + +MR  GV  ++ 
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  ++ A S    +++G+Q    + + +   +    +++VD+  + G + DA +   +M
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 655 DMRNT-VLWNAMLVGLAQHGNGE 676
            M+ T  +W A+L     H N +
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAK 451



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 34/311 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            ++ HA +  S      FL N+L+ +Y +CG++  ARR+FD MP RD+ SW S++A YA 
Sbjct: 83  ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     +   E   L   +       +  T A LLK   +S      E +H   +K    
Sbjct: 143 N-----DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWH 197

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  AL+++Y++ G++  A  +FD ++ ++ V W  ++  +A  G GE    +F ++
Sbjct: 198 DDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEM 257

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK-------------LLLYN----- 292
            R+G      +   V   I+ +G   + + V A+ IK             L +Y      
Sbjct: 258 QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSM 317

Query: 293 ----------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                     +  +VV WN  L+ + Q G    A+  F  M +  V  + +TFL  L A 
Sbjct: 318 IDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377

Query: 343 AGTDNLNLGQQ 353
           +    +  G+Q
Sbjct: 378 SHGGLVKEGKQ 388



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 119/227 (52%), Gaps = 7/227 (3%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           ++P  +L LLP + +  F  +  +  + S+L+ A +++   +G+  HA  +      D +
Sbjct: 144 DMPDEALGLLPGMLRGRFKPNGFT--FASLLKAAGASASSGIGEQIHALTVKYDWHDDVY 201

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ MY+RCG +  A  +FD++  ++ +SWN+++A +A  G+G          +F  
Sbjct: 202 VGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT-----LLMFAE 256

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++ +    +  T + +       G +   + VH + +K G     FV   ++++Y+K G 
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 316

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + +A+ +FD + ++DVV W  ML A+A+ G G E    F ++ + G+
Sbjct: 317 MIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 363



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 52/304 (17%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F+  +L+++Y K G + +A+ +FDGM  RD+  W  ++  YA+N   +E   L   + R 
Sbjct: 100 FLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159

Query: 255 GLCPDDESVQCVLGVI-----SDLGKRHEEQVQAYAIKLLLYNN---------------- 293
              P+  +   +L        S +G    EQ+ A  +K   +++                
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIG----EQIHALTVKYDWHDDVYVGSALLDMYARCGR 215

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                       + N V WN  ++G+ + GD    +  F  M R+  +    T+    +A
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR--------TDQFTL 393
           +AG   L  G+ +H   +KSG   +  VGN++++MY+K G +   R         D  T 
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
            S+L A +    GL      H   ++   V  + ++   I   C +G + +     E K 
Sbjct: 336 NSMLTAFAQY--GLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVK-----EGKQ 388

Query: 454 GFDL 457
            FD+
Sbjct: 389 YFDM 392



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 2/182 (1%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L+ A +   +L+  R IHA+L     +   F+  SL+ +Y KCG + DA  +F  M  R+
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
              W +++ G AQ+   +E L L   M     +P+  TF  +L A   +   S   E  H
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASA-SSGIGEQIH 188

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            +  KY    +V   S L+D   R GR   A  +   +  +   S +  + G  R +GD 
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR-KGDG 247

Query: 779 ET 780
           ET
Sbjct: 248 ET 249



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 29/234 (12%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
            + +HF+ SS  S    I         L  GK  HA ++ S +    F+ N ++ MY++ 
Sbjct: 262 FEATHFTYSSVFSAIAGI-------GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKS 314

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           GS++ AR++FD++  +D+++WNS+L A+A  G G  E VT     F  +R+     +++T
Sbjct: 315 GSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR-EAVTH----FEEMRKCGVHLNQIT 369

Query: 162 LAPLLKLCLSSGYVWAS----ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFL 216
              +L  C   G V       + +  Y L+  +  D +V+  +V++  + G + +A  F+
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEI--DHYVT--VVDLLGRAGLLNDALVFI 425

Query: 217 FDGMQERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           F    +    +W  +L   R +     G+     F   H   L PDD     +L
Sbjct: 426 FKMPMKPTAAVWGALLGSCRMHKNAKIGQ-----FAADHVFELDPDDTGPPVLL 474


>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
 gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
          Length = 763

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 236/737 (32%), Positives = 372/737 (50%), Gaps = 58/737 (7%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D +  N+L+ MY++CGSLV AR  F+K+  RD +SW +++ AY  +G G      E   L
Sbjct: 66  DSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGG-----EALEL 120

Query: 147 FR------SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           F        L +  T+ + L     L  CL  G       VH  +   G     FV+  L
Sbjct: 121 FSRMADEGCLPDGRTYLAALVACASLLRCLERGM-----DVHSQSRTSGCDSVPFVANTL 175

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           +++YSK G + +AK +FD  Q RD V W  M+  YAENG  E   HLF  + + G   + 
Sbjct: 176 IDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNR 235

Query: 261 ESVQCVLG-VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
           E+   +L   IS  G+  E   + +A +L+    + +  + N  +  Y + GD H A + 
Sbjct: 236 EAYTSLLRECIS--GRALERGARIHA-RLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKA 292

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F ++ R N    SV++ V LAA      ++ G+Q  G  L   F++  + G         
Sbjct: 293 FYSIERRN----SVSWTVMLAAY-----IDHGKQEQGLCL---FHTMDLEGAQA------ 334

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                    D FTL+ VL A SSL  G    + IH   +      D  +  AL+ +Y + 
Sbjct: 335 -------DMDAFTLSCVLSACSSLGAGAE-GQAIHARLVACGYELDIPLQNALVTMYAKC 386

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
             + EA  +F+N       +W ++I  Y+      ++L++F  M+  G + DE+T++   
Sbjct: 387 HCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALC 446

Query: 500 KACGCLLM-----LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            AC C L      L  G+ +H     +G + +  V + ++ MY +CG +++A ++FN + 
Sbjct: 447 AAC-CQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLT 505

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V+W  M++  V+ GE + AL ++ +MR  GV+PD  TFA++V A S L      R 
Sbjct: 506 PKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRA 565

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL----WNAMLVGLA 670
           +H  +        P  G +LV MYAKCG ++DA  +F++M  R++VL    WN++L  LA
Sbjct: 566 VHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQ-RHSVLAVAAWNSILAALA 624

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           +HG+G   ++ F  M    V+PD +T   +L ACS++GL++   + F  M   +G+ P  
Sbjct: 625 KHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAA 684

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ L+D LGRAG   EA E+I  MPF       + LL +C+   D   G   A +L+ 
Sbjct: 685 EHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASCQTSKDAGRGSRAAMQLIR 744

Query: 791 LEP-FDSSAYVLLSNIF 806
           ++P    S+YVLLSNI 
Sbjct: 745 MDPLLHDSSYVLLSNIL 761



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 251/575 (43%), Gaps = 86/575 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H  A++IG   D FV+  +++++S+ G +  A+ +FD M  RDVV W            
Sbjct: 17  LHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWN----------- 65

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
                             D  ++  ++ + +  G   E + +   ++        + V W
Sbjct: 66  ------------------DSYALNSLVNMYAKCGSLVEARAEFEKLQ------RRDAVSW 101

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG-TDNLNLGQQIHGTTL 359
              +  Y + G    A+E F  M       D  T+L AL A A     L  G  +H  + 
Sbjct: 102 TTLILAYTENGRGGEALELFSRMADEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSR 161

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV------------------------------------ 383
            SG  S   V N+LI+MYSK G +                                    
Sbjct: 162 TSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALH 221

Query: 384 ---C----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
              C    G   ++    S+LR   S    L    +IH   I  +   D+ +   L+ +Y
Sbjct: 222 LFACMEQQGCMYNREAYTSLLRECIS-GRALERGARIHARLIAIEKDKDTAIGNLLVQMY 280

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER--LDEIT 494
            + G +  A   F + +  +  +W  M+  YI      + L LF  M   G +  +D  T
Sbjct: 281 AKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFT 340

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           ++  + AC  L    +G+ +HA  +  G+ELD+ + + ++ MY KC  + +A+ +F++I 
Sbjct: 341 LSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQ 400

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL----TALE 610
               V+WT++IS  V +   D +L ++  M L G+ PDE T + L  A   L      L 
Sbjct: 401 DKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLA 460

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            GR +H  +       +P VG +LV MYA+CG + +A  +F ++  ++ V WNAML    
Sbjct: 461 VGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATV 520

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           + G  EE L+L + M+A GV PD+ TF  V++ACS
Sbjct: 521 EAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACS 555



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 224/467 (47%), Gaps = 35/467 (7%)

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           +H   ++ G  S   V N++I+++S+ G                         L  ++ +
Sbjct: 17  LHAGAVEIGAESDTFVANTVIDVFSRCG------------------------SLVNARNV 52

Query: 414 HVHAIKNDTVA--DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
               ++ D V+  DS+   +L+++Y + GS+ EA   FE     D  +W  +I  Y  + 
Sbjct: 53  FDRMVRRDVVSWNDSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENG 112

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLL-MLKQGKQMHAYAMKSGFELDLCVS 530
              +ALELFS M   G   D  T   A+ AC  LL  L++G  +H+ +  SG +    V+
Sbjct: 113 RGGEALELFSRMADEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVA 172

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++DMY KCG+++DA+ +F+   A D VAWT M+ G  +NGE + AL ++  M   G +
Sbjct: 173 NTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCM 232

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +   +  L++      ALE+G +IHA LI ++   D  +G  LV MYAKCG++  A   
Sbjct: 233 YNREAYTSLLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKA 292

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP--DSVTFIGVLSACSYTG 708
           F  ++ RN+V W  ML     HG  E+ L LF  M   G +   D+ T   VLSACS  G
Sbjct: 293 FYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLG 352

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
             +E  +  H      G E ++   + LV    +    +EA  +  ++  ++  S    +
Sbjct: 353 AGAEG-QAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSII 411

Query: 769 LGACR-VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
               +  +GD     ++A  L  ++P + +    LS + AA  Q +D
Sbjct: 412 SAYVQHERGDESLKMFLAMNLDGMQPDEMT----LSALCAACCQLED 454



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/580 (22%), Positives = 233/580 (40%), Gaps = 97/580 (16%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           + +R      +P  F+ N L+ MYS+CGSL+ A+++FD    RD ++W +++  YA +GE
Sbjct: 158 SQSRTSGCDSVP--FVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGE 215

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
                      LF  + +     +R     LL+ C+S   +     +H   + I    D 
Sbjct: 216 AE-----RALHLFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDT 270

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF--VDLH 252
            +   LV +Y+K G +  A+  F  ++ R+ V W VML AY ++G  E+   LF  +DL 
Sbjct: 271 AIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLE 330

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQ-------VQAYAIKLLLYN------------- 292
            +    D  ++ CVL   S LG   E Q          Y + + L N             
Sbjct: 331 GAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLE 390

Query: 293 ---------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                     + + V W   +S Y+Q      +++ F+ M    +Q D +T     AA  
Sbjct: 391 EARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACC 450

Query: 344 GTDN----LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------- 383
             ++    L +G+ +H     +G     +VG +L+ MY++ GC+                
Sbjct: 451 QLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVV 510

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHL---------------SKQIHVHA 417
                       G   +   L   +RA   +P+                   S+ +H   
Sbjct: 511 SWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEV 570

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG---FDLATWNAMIFGYILSNNSH 474
                       TAL+ +Y + G + +A  +FE         +A WN+++       +  
Sbjct: 571 AARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGA 630

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCV 529
            A+E F  M  +  + D ITI   + AC    +L  G       +H + +    E   C 
Sbjct: 631 TAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAAEHYAC- 689

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              ++D+  + G   +A+ +   +P APD+VAW T+++ C
Sbjct: 690 ---LIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASC 726



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 155/361 (42%), Gaps = 40/361 (11%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S+LR  IS   L  G   HAR++   +  D  + N L+ MY++CG L  AR+ F  + 
Sbjct: 238 YTSLLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIE 297

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS--LRESITFTSRLTLAPLLKLCLSSG 173
            R+ +SW  +LAAY   G+       +G  LF +  L  +       TL+ +L  C S G
Sbjct: 298 RRNSVSWTVMLAAYIDHGKQE-----QGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLG 352

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
                + +H   +  G   D  +  ALV +Y+K   + EA+ +FD +Q++  V W  ++ 
Sbjct: 353 AGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIIS 412

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR----------------- 276
           AY ++  G+E   +F+ ++  G+ PD+ ++  +      L  R                 
Sbjct: 413 AYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVA 472

Query: 277 -HEEQVQAYAIKLLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECF 320
            H++        + +Y                   +VV WN  L+  ++ G+   A+   
Sbjct: 473 GHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLH 532

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M    V  D+ TF V +AA +   +    + +H      G     + G +L+ MY+K 
Sbjct: 533 QRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKC 592

Query: 381 G 381
           G
Sbjct: 593 G 593



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 8/209 (3%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L +G+  H RI  +    +  +   L+ MY+RCG L+ A  +F+K+  +D++SWN++L A
Sbjct: 459 LAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTA 518

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              +GE       E  RL + +R         T A ++  C +      S  VH      
Sbjct: 519 TVEAGEAE-----EALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAAR 573

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV---LWKVMLRAYAENGFGEEVF 245
           GL        ALV +Y+K G++ +A  +F+ MQ   V+    W  +L A A++G G    
Sbjct: 574 GLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAV 633

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             F  +  + + PD  ++  +L   S  G
Sbjct: 634 EFFRVMTMAYVQPDGITITVMLHACSHSG 662



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 41/144 (28%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI-------------- 644
           LVK +S    L++   +HA  +++   SD FV  +++D++++CG++              
Sbjct: 5   LVKVAS----LDKCCALHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRD 60

Query: 645 ----EDAYIL-------------------FKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                D+Y L                   F+++  R+ V W  +++   ++G G E L+L
Sbjct: 61  VVSWNDSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALEL 120

Query: 682 FEDMKAHGVEPDSVTFIGVLSACS 705
           F  M   G  PD  T++  L AC+
Sbjct: 121 FSRMADEGCLPDGRTYLAALVACA 144


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 228/678 (33%), Positives = 334/678 (49%), Gaps = 76/678 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N + WN  + G+    D   A+  +V MI   +  +S TF     + A
Sbjct: 30  YAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCA 89

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     G+QIH   LK G    + V  SLI+MY++ G V                    
Sbjct: 90  KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIV-------------------- 129

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            E  H       H        D    TA+I  Y   G+M +A+ +F+     D+ +WNAM
Sbjct: 130 -EDAHKVFDTSSHR-------DVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAM 181

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY       +ALELF+ M     + DE T+AT +  C     ++ G+Q+H++    GF
Sbjct: 182 ISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGF 241

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y KCG M  A  +F  +   D ++W T+I G         AL ++ +
Sbjct: 242 GSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQE 301

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAKC 641
           M   G  P++ T   ++ A + L A++ GR IH  + K      ++  +  SL+DMYAKC
Sbjct: 302 MLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKC 361

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           GNIE A  +F  +  ++    NAM+ G A HG  +    L   MK  G+EPD +TF+G+L
Sbjct: 362 GNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLL 421

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS+ GL     + F  M   Y IEP++EHY  ++D LGR+G  KEA ELI SM  E  
Sbjct: 422 SACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPD 481

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             +  +LL AC++  + E G+ +A+KLM +EP +  +YVLLSNI+A + +WDDV   R  
Sbjct: 482 GVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTL 541

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           +  K +KK P                          I+  +E +   + E G+V DT  V
Sbjct: 542 LNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEV 601

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSV--ILSN------------------KE 898
           L ++EEE KE AL YHSEKLA A+GLIST P +   I+ N                  K 
Sbjct: 602 LQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKR 661

Query: 899 PLYA---NRFHHLRDGMC 913
            + A   +RFHH +DGMC
Sbjct: 662 EIIARDRSRFHHFKDGMC 679



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 212/512 (41%), Gaps = 94/512 (18%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F  + + + +SWN+++  +A S +           L+  +       +  T  
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDP-----ISALNLYVYMISLGLSPNSYTFP 82

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            L K C  S      + +H   LK GL  D  V  +L+++Y++ G + +A  +FD    R
Sbjct: 83  FLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR 142

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV +  M+  YA  G  ++   +F ++                                
Sbjct: 143 DVVSYTAMITGYASRGNMDKAQKMFDEI-------------------------------- 170

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             IK        +VV WN  +SGY ++G    A+E F  M++ +V+ D  T    L+   
Sbjct: 171 -PIK--------DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCT 221

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------- 383
            + N+ LG+QIH      GF S + + N+LI++YSK G +                    
Sbjct: 222 HSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNT 281

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK- 419
                                   G   +  T+ S+L A + L   + + + IHV+  K 
Sbjct: 282 LIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLG-AIDIGRWIHVYIDKK 340

Query: 420 -NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
               + ++ + T+LID+Y + G++  A  +F+      L++ NAMIFG+ +   +  A +
Sbjct: 341 LKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFD 400

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMY 537
           L S M   G   D+IT    + AC    +   G+++  +  +    E  L     ++D+ 
Sbjct: 401 LLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLL 460

Query: 538 VKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            + G   +A+ + N +   PD V W +++  C
Sbjct: 461 GRSGLFKEAEELINSMTMEPDGVIWGSLLKAC 492



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 36/308 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ ++S   D      ++T Y+  G++  A+++FD++P +D++SWN++++ YA  G    
Sbjct: 134 KVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGR--- 190

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
               E   LF  + +        T+A +L  C  SG V     +H +    G   +  + 
Sbjct: 191 --YKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV 248

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++YSK G++  A  LF+G+Q +DV+ W  ++  YA     +E   +F ++ + G  
Sbjct: 249 NALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGET 308

Query: 258 PDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLL---------------LYNNNSNV---- 297
           P+D ++  +L   + LG     + +  Y  K L               +Y    N+    
Sbjct: 309 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAAN 368

Query: 298 ----VLWNKKLS-------GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                + NK LS       G+   G    A +    M +  ++ D +TF+  L+A +   
Sbjct: 369 QVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAG 428

Query: 347 NLNLGQQI 354
             +LG++I
Sbjct: 429 LSDLGRKI 436



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 110/226 (48%), Gaps = 12/226 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L     + ++ LG+  H+ I N     +  L N L+ +YS+CG +  A  LF+ +  +
Sbjct: 215 TVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK 274

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ISWN+++  YA+       +  E   +F+ + +     + +T+  +L  C   G +  
Sbjct: 275 DVISWNTLIGGYAY-----INHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329

Query: 178 SETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              +H Y  K   G++ +  +  +L+++Y+K G I  A  +FD +  + +     M+  +
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKR 276
           A +G  +  F L   + + G+ PDD +       C    +SDLG++
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK 435


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 219/707 (30%), Positives = 352/707 (49%), Gaps = 111/707 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQ-- 352
           + VL N  +S Y +      A+  F +++ S +++ D  +F   L+A     N+++    
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCA 179

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           Q+  + LKSG    + V N+L+ +Y K   +   R  +  L         +P+       
Sbjct: 180 QLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVL-------DEMPD------- 225

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD-GFDLATWNAMIFGYILSN 471
                       D+   T ++  Y R G +  A  +FE  D  FD+  WNAMI GY+ S 
Sbjct: 226 -----------KDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDV-VWNAMISGYVHSG 273

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY--AMKSGF--ELDL 527
              +A ELF  M      LDE T  + + AC        GK +H     ++  F  E  L
Sbjct: 274 MVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAAL 333

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG-----CVDNGEE-------- 574
            V++ ++ +Y KCG +  A+ IF+++ + D V+W T++SG     C+D   E        
Sbjct: 334 PVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK 393

Query: 575 ------------------DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
                             + AL ++++MR   V P ++T+A  + A   L +L+ G+Q+H
Sbjct: 394 NELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLH 453

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
            +L++L        G +L+ MYA+CG +++A ++F  M   ++V WNAM+  L QHG+G 
Sbjct: 454 GHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGR 513

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L+LF+ M A G+ PD ++F+ VL+AC+++GLV E ++ F  M+  +GI P  +HY+ L
Sbjct: 514 EALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRL 573

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D LGRAGR  EA +LI +MPFE + S+  A+L  CR  GD E G   A++L  + P   
Sbjct: 574 IDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
             Y+LLSN ++AA +W D    R  M+ + VKK+P                       A 
Sbjct: 634 GTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAH 693

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS-- 891
            ++  +E +  R+++ GYVPDT  VL D+E  +KE  L+ HSE+LA  +GL+  PP +  
Sbjct: 694 KVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATV 753

Query: 892 VILSN-------------------KEPLYAN--RFHHLRDGMCPCAD 917
            +L N                   +E +  +  RFHH +DG C C +
Sbjct: 754 TVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 800



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 182/438 (41%), Gaps = 85/438 (19%)

Query: 404 PEGLHLS-KQIHVHAIKNDTVADS---------FVSTALIDVYCRNGSMAEAEYLFE--N 451
           P   HL+ + IH++ +  D  A +           +T+L+  Y   G +  A   F+   
Sbjct: 56  PPHPHLTLRLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVP 115

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCL--LML 508
           +   D    NA+I  Y  ++++  A+ +F  +  SG  R D+ +    + A G L  + +
Sbjct: 116 QARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISV 175

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM---VDAQSIFNDIPAPDDVAWTTMI 565
           +   Q+    +KSG    L VS+ ++ +Y+KC A+    DA+ + +++P  D + WTTM+
Sbjct: 176 RHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMV 235

Query: 566 SGCVDNGEEDLALSIYHQ-------------------------------MRLSGVVPDEF 594
            G V  G+   A S++ +                               M L  V  DEF
Sbjct: 236 VGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEF 295

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYIL 650
           TF  ++ A +       G+ +H  + +L  +  P   +    +LV +Y+KCGNI  A  +
Sbjct: 296 TFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRI 355

Query: 651 FKQMDMRNTVLWNAMLVGLAQ------------------------------HGN-GEETL 679
           F  M  ++ V WN +L G  +                              HG   E+ L
Sbjct: 356 FDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDAL 415

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           KLF  M+A  V+P   T+ G +SAC   G +    +  H    + G E      + L+  
Sbjct: 416 KLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG-KQLHGHLVQLGFEGSNSAGNALITM 474

Query: 740 LGRAGRTKEAGELILSMP 757
             R G  KEA  + L MP
Sbjct: 475 YARCGAVKEANLMFLVMP 492



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 117/534 (21%), Positives = 207/534 (38%), Gaps = 143/534 (26%)

Query: 90  LTNNLMTMYSRCGSLVY---ARRLFDKMPDRDLISWNSILAAYAHSGEGNAEN------- 139
           ++N L+ +Y +C +L     AR++ D+MPD+D ++W +++  Y   G+  A         
Sbjct: 196 VSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVD 255

Query: 140 -------------------VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
                              V E F LFR +          T   +L  C ++G+    ++
Sbjct: 256 VKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKS 315

Query: 181 VHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
           VHG   +I  +   FV       + ALV +YSK G I  A+ +FD M+ +DVV W  +L 
Sbjct: 316 VHG---QITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILS 372

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
            Y E+   ++   +F                             EE         + Y N
Sbjct: 373 GYVESSCLDKAVEVF-----------------------------EE---------MPYKN 394

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             +   W   +SGY+  G +  A++ F  M   +V+    T+  A++A     +L  G+Q
Sbjct: 395 ELS---WMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           +HG  ++ GF  +   GN+LI MY++ G V                           K+ 
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAV---------------------------KEA 484

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           ++  +    + DS    A+I    ++G   EA  LF+                       
Sbjct: 485 NLMFLVMPNI-DSVSWNAMISALGQHGHGREALELFDR---------------------- 521

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--S 531
                    M   G   D I+  T + AC    ++ +G Q +  +MK  F +       +
Sbjct: 522 ---------MVAEGIYPDRISFLTVLTACNHSGLVDEGFQ-YFESMKRDFGIIPGEDHYT 571

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            ++D+  + G + +A+ +   +P  P    W  ++SGC  +G+ +L      Q+
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQL 625



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 30/226 (13%)

Query: 72  GKSTHARI--LNSSQIPDRFL--TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           GKS H +I  L  + +P+  L   N L+T+YS+CG++  ARR+FD M  +D++SWN+IL+
Sbjct: 313 GKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILS 372

Query: 128 AYAHSG----------EGNAEN-----------VTEGF-----RLFRSLRESITFTSRLT 161
            Y  S           E   +N           V  GF     +LF  +R         T
Sbjct: 373 GYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYT 432

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            A  +  C   G +   + +HG+ +++G         AL+ +Y++ G ++EA  +F  M 
Sbjct: 433 YAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP 492

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
             D V W  M+ A  ++G G E   LF  +   G+ PD  S   VL
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVL 538



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 7/170 (4%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H  ++           N L+TMY+RCG++  A  +F  MP+ D +SWN++++A   
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGL 190
            G G      E   LF  +     +  R++   +L  C  SG V    +         G+
Sbjct: 509 HGHGR-----EALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGI 563

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
           +  E     L+++  + G+I EA+ L   M  E    +W+ +L     +G
Sbjct: 564 IPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 244/883 (27%), Positives = 413/883 (46%), Gaps = 135/883 (15%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A LL +   S  +   + VH    K  +    F+   LV +Y   G + +AK  FD M  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS------DLGKR 276
           +D + W  ++RA+ + G  E+  HLF  +   G+ P + +   VLG  S      + G+R
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 277 HEEQVQAYAIK---------LLLYNNNSNV---------------VLWNKKLSGYLQVGD 312
               ++  A++         L +Y   S+V               V WN  ++ Y Q   
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ------------QIHGTTLK 360
           +  AI+ F  M+   V+ + +TF+  L A +   +L + +             +H ++  
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 361 SG---FYSA-----------------VIVGNSLINMYS------------KMGCVCGLRT 388
           +    FY +                 +I+  ++I  Y+            K+  + G++ 
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKL 301

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIH--VHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           D+    +VL A S  P GL   + IH  +  I+ D   ++    ALI++Y + GS+ EA 
Sbjct: 302 DRIACMAVLNACSG-PRGLEEGRMIHGFMREIRFDRHVNA--GNALINMYGKCGSLEEAV 358

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F +    D+ +WN +I  +   +   +AL L   M   G + D+I+   A+  C    
Sbjct: 359 EVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASE 418

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L +G+ +H++ ++SG + D+ + + ILDMY  C +  DA  +F  + A D V+W  MI+
Sbjct: 419 ALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMIT 478

Query: 567 GCVDNGE-EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
                      AL ++ QM+L G +PD  +F   + A +   +L +G+ +H  + +    
Sbjct: 479 AYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLE 538

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           S+  V  ++++MYAK G++  A  +F +M + + + WN M+   AQHG+ ++ L+ F  M
Sbjct: 539 SNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRM 598

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAG 744
              G  P+ VTF+ V+SACS+ GLV +  + F  L+ +   I P  EHY  +VD + RAG
Sbjct: 599 NHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAG 658

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           +   A + I + P +    +H  +LGA +V  D E  +  AE LM L P  S+AYV+LSN
Sbjct: 659 KLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSN 718

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKE---------------- 848
           ++    + D+    R  M  KN++K+PA   F+ +  + +R+ E                
Sbjct: 719 LYDEVGKKDEGAKIRRLMYEKNIRKEPA---FSSI-AVKRRVHEFFTGDTTNARTPEILE 774

Query: 849 -----------GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
                       GY PDT  +L DV +E+K+R L YHSEKLA A+GLIST P + +    
Sbjct: 775 ELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIK 834

Query: 894 -----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                            ++ +E +   ++RFHH  +G C C D
Sbjct: 835 NLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGD 877



 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 188/736 (25%), Positives = 314/736 (42%), Gaps = 85/736 (11%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           +  L LGK  HARI  S+     F+ + L+ MY  CGSL+ A+  FD+MP +D ++W  +
Sbjct: 11  SRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARL 70

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           + A+   G+       +   LFRS++ E +   +R  +A L         +     +HG 
Sbjct: 71  IRAHGQIGDSE-----QALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGV 125

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
                +  D +VS  L+++Y K   + +A+ +FDG++ + VV W  M+ AYA+    E+ 
Sbjct: 126 LRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQA 185

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLY 291
             +F  +   G+  +  +   VL   S L              +R  + +   +    L 
Sbjct: 186 IQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALV 245

Query: 292 N-----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           N                 +   ++L    ++ Y Q      A+E F  M+   V+ D + 
Sbjct: 246 NFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIA 305

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----CVCGLRTDQ 390
            +  L A +G   L  G+ IHG   +  F   V  GN+LINMY K G     V   R+ Q
Sbjct: 306 CMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQ 365

Query: 391 F-------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-------------------- 423
                   T+ +     S  PE LHL   + +  +K D +                    
Sbjct: 366 HRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRM 425

Query: 424 -----------ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
                      AD  +  A++D+Y    S  +A  +F      D  +WNAMI  Y     
Sbjct: 426 IHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPR 485

Query: 473 -SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
            S +AL LF  M   G   D I+   A+ AC     L +GK +H    ++G E ++ V++
Sbjct: 486 LSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVAN 545

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +L+MY K G++V A+ +F  +P PD ++W  MIS    +G  D  L  + +M   G +P
Sbjct: 546 AVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLP 605

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYI 649
           ++ TF  +V A S    ++ G Q+  +L+    +  P       +VD+ A+ G ++ A  
Sbjct: 606 NDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEK 665

Query: 650 LFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYT 707
                 ++ + V+ + ML     H + E   K  E +    + PD S  ++ + +     
Sbjct: 666 FIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLME--LTPDRSAAYVVLSNLYDEV 723

Query: 708 GLVSEAYENFHLMREK 723
           G   E  +   LM EK
Sbjct: 724 GKKDEGAKIRRLMYEK 739



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 37/238 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H RI  +    +  + N ++ MY++ GSLV AR++F KMP  D+ISWN +++A+A 
Sbjct: 525 GKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQ 584

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
              G+A+ V    R FR +       + +T   ++  C   G V       G  L + L+
Sbjct: 585 --HGHADQV---LRFFRRMNHEGKLPNDVTFVSVVSACSHGGLV-----KDGVQLFVSLL 634

Query: 192 WD-EFVSG------ALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
            D   +S        +V++ ++ GK+  A KF+     + D V+   ML        G  
Sbjct: 635 HDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTML--------GAS 686

Query: 244 VFHLFVDLHRSG------LCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNN 294
             H  V+  R        L PD  +   VL  + D +GK+ E       I+ L+Y  N
Sbjct: 687 KVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDE----GAKIRRLMYEKN 740


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 226/800 (28%), Positives = 382/800 (47%), Gaps = 106/800 (13%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDE---FVSGALVNIYSKFGKIREAKFLFD 218
           L  LL+ C+S+ ++     +H  A+  G + +     +   L+ +Y    + R+A  +F 
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 219 GMQERDV---VLWKVMLRAYAENGFGEEVFHLFVDL--HRSGLCPDDESVQCV------L 267
            +        + W  ++R +   G        +V +  H +   PD  ++  V      L
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNS------------------------NVVLWNKK 303
           G +S LG+      +A  +   +Y  ++                        + VLWN  
Sbjct: 155 GAVS-LGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVM 213

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + GY++ GD  GA+  F NM  S  + +  T    L+  A   +L  G Q+H   +K G 
Sbjct: 214 MDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGL 273

Query: 364 YSAVIVGNSLINMYSKM--------------------------GCV-------------- 383
              V V N+L++MY+K                           GCV              
Sbjct: 274 EQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCD 333

Query: 384 ---CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G R D  TL S+L A + L  GL   K++H + I+N    D+F+ +AL+D+Y +  
Sbjct: 334 MLRSGARPDSVTLVSLLPALTDL-NGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCR 392

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            +  A  L++     D+   + +I GY+L+  S KAL++F ++     + + +T+A+ + 
Sbjct: 393 DVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLP 452

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  +  L  G+++H Y +++ +E    V S ++DMY KCG +  +  IF+ +   D+V 
Sbjct: 453 ACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVT 512

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W +MIS    NGE   AL ++ QM + G+  +  T +  + A + L A+  G++IH  +I
Sbjct: 513 WNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVII 572

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           K    +D F   +L+DMYAKCGN+E A  +F+ M  +N V WN+++     HG  +E++ 
Sbjct: 573 KGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVS 632

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
               M+  G +PD VTF+ ++SAC++ GLV E  + F  M ++Y I P +EH++ +VD  
Sbjct: 633 FLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLY 692

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
            R+GR  +A + I  MPF+  A +  ALL ACRV  + E     +++L  L+P +S  YV
Sbjct: 693 SRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYV 752

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFA 837
           L+SNI A A +WD V+  R  MK   + K P                       ++ I+ 
Sbjct: 753 LMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYT 812

Query: 838 KVEGLIKRIKEGGYVPDTDF 857
            ++ L++ ++E GYVP  D 
Sbjct: 813 SLKALLQELREEGYVPRPDL 832



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 192/715 (26%), Positives = 325/715 (45%), Gaps = 102/715 (14%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARR 109
           SS+ +  ++LR  +S   L LG   HAR + S  + +    +N + +++R  G  V ARR
Sbjct: 30  SSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSN----HNHLALHTRLLGMYVLARR 85

Query: 110 ------LFDKMPDR---DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
                 +F  +P       + WN ++  +  +G     ++   F +      +       
Sbjct: 86  FRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGH---HSLAVLFYVKMWTHPAAPSPDAH 142

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           TL  ++K C + G V     VH  A   GL  D +V  AL+ +YS  G +R+A+  FDGM
Sbjct: 143 TLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGM 202

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI---SDL---- 273
             RD VLW VM+  Y + G       LF ++  SG  P+  ++ C L V    +DL    
Sbjct: 203 PWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGV 262

Query: 274 ------GKRHEEQVQAYAIKLL-LYNN---------------NSNVVLWNKKLSGYLQVG 311
                  K   EQ  A A  LL +Y                   ++V WN  +SG +Q G
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS---------- 361
               A+  F +M+RS  + DSVT +  L A+   + L  G+++HG  +++          
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382

Query: 362 ----------------GFYSA-----VIVGNSLINMYSKMG---------------CVCG 385
                             Y A     V++G+++I+ Y   G               C+  
Sbjct: 383 ALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCI-- 440

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + +  T+ASVL A +S+   L L ++IH + ++N      +V +AL+D+Y + G +  +
Sbjct: 441 -KPNAVTVASVLPACASI-SALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
            Y+F      D  TWN+MI  +  +    +AL+LF  M   G + + +TI++A+ AC  L
Sbjct: 499 HYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASL 558

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             +  GK++H   +K   + D+   S ++DMY KCG M  A  +F  +P  ++V+W ++I
Sbjct: 559 PAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSII 618

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---L 622
           S    +G    ++S  H+M+  G  PD  TF  L+ A +    +E+G Q+   + K   +
Sbjct: 619 SAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLI 678

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
               + F    +VD+Y++ G ++ A      M  + +  +W A+L     H N E
Sbjct: 679 APRMEHFA--CMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVE 731



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 260/585 (44%), Gaps = 88/585 (15%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H     +    D ++ + L+ MYS  G L  AR  FD MP RD + WN ++  Y 
Sbjct: 159 LGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYI 218

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G+     V    RLFR++R S    +  TLA  L +C +   + +   +H  A+K GL
Sbjct: 219 KAGD-----VGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGL 273

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +  V+  L+++Y+K   + +A  LF+ +   D+V W  M+    +NG  +E   LF D
Sbjct: 274 EQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCD 333

Query: 251 LHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN---------------- 293
           + RSG  PD  ++  +L  ++DL G +  ++V  Y I+  ++ +                
Sbjct: 334 MLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRD 393

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         +VV+ +  +SGY+  G +  A++ F  ++   ++ ++VT    L A
Sbjct: 394 VRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPA 453

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------------------- 381
            A    L LGQ+IHG  L++ +     V ++L++MY+K G                    
Sbjct: 454 CASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTW 513

Query: 382 -----------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                  C+ G++ +  T++S L A +SLP  ++  K+IH   I
Sbjct: 514 NSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLP-AIYYGKEIHGVII 572

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           K    AD F  +ALID+Y + G+M  A  +FE     +  +WN++I  Y       +++ 
Sbjct: 573 KGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVS 632

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGI 533
               M   G + D +T    + AC    ++++G Q+       Y +    E   C    +
Sbjct: 633 FLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFAC----M 688

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +D+Y + G +  A     D+P  PD   W  ++  C  +   +LA
Sbjct: 689 VDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELA 733


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 223/686 (32%), Positives = 331/686 (48%), Gaps = 92/686 (13%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+   V+ + +TFL  L +V   D L  G+ IH    +S     V V  +L+N Y+K G 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 383 VC-------------------------------------------GLRTDQFTLASVLRA 399
           +                                            G R D+ T  S+L A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
             + PE L   K +     +     D FV TALI +Y R  S   A  +F      +L T
Sbjct: 121 CVN-PENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+A+I  +    +  +AL  F  M   G   + +T  + +        L++  ++H    
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239

Query: 520 KSGFELDLCVSSGILDMYVKC--GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           + G +    +S+ ++++Y +C  G +  A+ I  ++      AW  +I+G   +G    A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L  Y +++L  +  D+ TF  ++ A +  T+L +G+ IH+N ++    SD  V  +L +M
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KCG++E+A  +F  M +R+ V WN ML   AQHG  EE LKL   M+  GV+ + +TF
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + VLS+CS+ GL++E  + FH +    GIE + EHY  LVD LGRAG+ +EA + I  MP
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            E       +LLGACRV  D + GK  A KL+ L+P +SSA V+LSNI++    W +   
Sbjct: 480 SEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAK 539

Query: 818 ARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPD 854
            R  M  + VKK P                       A  I+ KVE L   ++E GYVPD
Sbjct: 540 LRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD 599

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------------- 893
           T  VL DV+EE+KE  L YHSEKLA A+GLISTP  S +                     
Sbjct: 600 TKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISK 659

Query: 894 LSNKEPLYAN--RFHHLRDGMCPCAD 917
           ++ +E +  +  RFHH RDG C C D
Sbjct: 660 ITGREIVVRDNHRFHHFRDGSCSCKD 685



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/547 (20%), Positives = 224/547 (40%), Gaps = 99/547 (18%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L   +    L  GK  H+ +  S    D F+   L+  Y++CGSL  AR++FD MP
Sbjct: 13  FLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP 72

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R + +WNS+++AY+ S     E   E F +F+ ++       R+T   +L  C++   +
Sbjct: 73  CRSVGTWNSMISAYSIS-----ERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENL 127

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + V     +     D FV  AL+ +Y++      A  +F  M++++++ W  ++ A+
Sbjct: 128 QHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAF 187

Query: 236 AENGFGEEVFHLFVDLHRSGLCPD--------------------------------DESV 263
           A++G   E    F  + + G+ P+                                D++ 
Sbjct: 188 ADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTT 247

Query: 264 QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                +++  G+    ++    + +L   +   +  WN  ++GY   G +  A+E +  +
Sbjct: 248 TMSNALVNVYGRCETGELDVAEV-ILQEMDEQQITAWNVLINGYTLHGRSREALETYQRL 306

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
               +  D VTF+  L A   + +L  G+ IH   ++ G  S VIV N+L NMYSK G  
Sbjct: 307 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG-- 364

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
                   ++ +  R   S+P                  +  +     ++  Y ++G   
Sbjct: 365 --------SMENARRIFDSMP------------------IRSAVSWNGMLQAYAQHG--- 395

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
                                        S + L+L   M   G +L+ IT  + + +C 
Sbjct: 396 ----------------------------ESEEVLKLIRKMEQEGVKLNGITFVSVLSSCS 427

Query: 504 CLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAW 561
              ++ +G Q  H+     G E+       ++D+  + G + +A+   + +P+ P+ V W
Sbjct: 428 HAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTW 487

Query: 562 TTMISGC 568
            +++  C
Sbjct: 488 ASLLGAC 494



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 186/433 (42%), Gaps = 49/433 (11%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F +  H         + SIL   ++  +L  GK     I  +S   D F+   L+TMY+R
Sbjct: 99  FQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYAR 158

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           C S   A ++F +M  ++LI+W++I+ A+A  G     +  E  R FR +++     +R+
Sbjct: 159 CRSPENAAQVFGRMKQKNLITWSAIITAFADHG-----HCGEALRYFRMMQQEGILPNRV 213

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK--FGKIREAKFLFD 218
           T   LL    +   +     +H    + GL     +S ALVN+Y +   G++  A+ +  
Sbjct: 214 TFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQ 273

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            M E+ +  W V++  Y  +G   E    +  L    +  D  +   VL   +      E
Sbjct: 274 EMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAE 333

Query: 279 -EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFL 336
            + + + A++  L   +S+V++ N   + Y + G    A   F +M IRS V ++ +   
Sbjct: 334 GKMIHSNAVECGL---DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGM--- 387

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
             L A A           HG +              ++ +  KM    G++ +  T  SV
Sbjct: 388 --LQAYAQ----------HGES------------EEVLKLIRKMEQE-GVKLNGITFVSV 422

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST----ALIDVYCRNGSMAEAE-YLFEN 451
           L  SS    GL      + H++ +D   +  V T     L+D+  R G + EAE Y+ + 
Sbjct: 423 L--SSCSHAGLIAEGCQYFHSLGHDRGIE--VKTEHYGCLVDLLGRAGKLQEAEKYISKM 478

Query: 452 KDGFDLATWNAMI 464
               ++ TW +++
Sbjct: 479 PSEPEIVTWASLL 491


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 315/610 (51%), Gaps = 78/610 (12%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G++ D++T   + +  +     L   +Q+H H +K+    + FV TAL+ +Y   G +  
Sbjct: 113 GVKPDRYTFPFLFKGFTR-DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT 171

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D+ TWN +I  Y       ++  LF  M         +T+   + AC  
Sbjct: 172 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 231

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L+ GK++H+Y      E +L + + ++DMY  CG M  A  IF  +   D ++WTT+
Sbjct: 232 LKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 291

Query: 565 ISGCVDNGEEDLA-------------------------------LSIYHQMRLSGVVPDE 593
           +SG  + GE D+A                               L ++  M+ + V PDE
Sbjct: 292 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 351

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT   ++ A + L ALE G  I   + +    +D FV  +L+DMY KCG+++ A  +F++
Sbjct: 352 FTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 411

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  R+   W AM+VGLA +G+GE+ L +F +M    + PD +T+IGVLSAC++TGLV + 
Sbjct: 412 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKG 471

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F  M  ++GIEP + HY  LVD L RAGR KEA E+I +MP +A++ +  ALL  CR
Sbjct: 472 RKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCR 531

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA- 832
           V  +++  + V ++++ LEP + + YVLL NI+AA  +W+D+   R  M  K +KK P  
Sbjct: 532 VYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGC 591

Query: 833 ----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                   I AK++ + + +K  GY PD   V LD+ EE+KE +
Sbjct: 592 SLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENS 651

Query: 871 LYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHH 907
           ++ HSEKLA A+GLI++PP   I                     + N+E +  +  RFHH
Sbjct: 652 VFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHH 711

Query: 908 LRDGMCPCAD 917
            + G+C C D
Sbjct: 712 FKHGLCSCKD 721



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 248/547 (45%), Gaps = 79/547 (14%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI--YSKFGKIREAKFLFDGMQ 221
           PL+ L  +   +   + VH  A+K GL  +  +   ++      ++G  + A+ LFD + 
Sbjct: 20  PLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP 79

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQ 280
           E ++ +W  M+R Y+   F +    L++++ R G+ PD  +   +  G   D+   +  Q
Sbjct: 80  EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 139

Query: 281 VQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGD 312
           +  + +K  L  N                             ++V+ WN  +S Y +VG 
Sbjct: 140 LHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK 199

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              +   F+ M    V   +VT ++ L+A +   +L  G+++H         S +++ N+
Sbjct: 200 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENA 259

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           +I+MY+  G       +  +   + R+ ++               I   T+   F +   
Sbjct: 260 MIDMYADCG-------EMDSALGIFRSMNNR------------DIISWTTIVSGFTNLGE 300

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           IDV         A   F+     D  +W AMI GYI SN   +ALELF +M  +  + DE
Sbjct: 301 IDV---------ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 351

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+ + + AC  L  L+ G+ +  Y  ++  + DL V + ++DMY KCG +  A+SIF +
Sbjct: 352 FTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 411

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +   D   WT MI G   NG  + AL ++  M  + ++PDE T+  ++ A +    +++G
Sbjct: 412 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKG 471

Query: 613 RQ----------IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
           R+          I  N+    C         LVD+ A+ G +++AY + + M ++ N+++
Sbjct: 472 RKYFLRMTSQHGIEPNIAHYGC---------LVDLLARAGRLKEAYEVIENMPIKANSIV 522

Query: 662 WNAMLVG 668
           W A+L G
Sbjct: 523 WGALLAG 529



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 239/526 (45%), Gaps = 28/526 (5%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +  H + +      +  L N +MT       G   YARRLFD++P+ +L  WN+++  Y+
Sbjct: 35  QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 94

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
                  +    G  L+  +        R T   L K       +     +HG+ LK GL
Sbjct: 95  R-----LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL 149

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            ++ FV  ALV +Y   G++  A+ +FD   + DV+ W +++ AY + G  EE   LF+ 
Sbjct: 150 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 209

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
           +    + P   ++  VL   S L   R  ++V +Y     +    SN+VL N  +  Y  
Sbjct: 210 MEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV---ESNLVLENAMIDMYAD 266

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF--YSAV 367
            G+   A+  F    RS    D +++   ++       +++ +       +  +  ++A+
Sbjct: 267 CGEMDSALGIF----RSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 322

Query: 368 IVG-------NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           I G          + ++  M     ++ D+FT+ SVL A + L   L L + I  +  +N
Sbjct: 323 IDGYIRSNRFKEALELFRNMQAT-NVKPDEFTMVSVLTACAHLG-ALELGEWIRTYIDRN 380

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               D FV  ALID+Y + G + +AE +F      D  TW AMI G  ++ +  KAL++F
Sbjct: 381 KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMF 440

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-AYAMKSGFELDLCVSSGILDMYVK 539
           S+M  +    DEIT    + AC    ++ +G++       + G E ++     ++D+  +
Sbjct: 441 SNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLAR 500

Query: 540 CGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            G + +A  +  ++P   + + W  +++GC    E D+A  +  Q+
Sbjct: 501 AGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 546



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 173/385 (44%), Gaps = 34/385 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN--GSMAEAEYLFENKDGFDLATWNA 462
           E +   +Q+H  AIK    A+  +   ++   C +  G    A  LF+     +L  WN 
Sbjct: 29  ESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNT 88

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY   +     + L+  M   G + D  T     K     + L+ G+Q+H + +K G
Sbjct: 89  MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 148

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            + ++ V + ++ MY+ CG +  A+ +F+  P  D + W  +IS     G+ + +  ++ 
Sbjct: 149 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFL 208

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            M    V+P   T  +++ A S L  L  G+++H+ +      S+  +  +++DMYA CG
Sbjct: 209 VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCG 268

Query: 643 NIEDAYILFKQMDMRNT-------------------------------VLWNAMLVGLAQ 671
            ++ A  +F+ M+ R+                                V W AM+ G  +
Sbjct: 269 EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIR 328

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
               +E L+LF +M+A  V+PD  T + VL+AC++ G + E  E      ++  I+ ++ 
Sbjct: 329 SNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL-ELGEWIRTYIDRNKIKNDLF 387

Query: 732 HYSFLVDALGRAGRTKEAGELILSM 756
             + L+D   + G   +A  +   M
Sbjct: 388 VRNALIDMYFKCGDVDKAESIFREM 412



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 26/234 (11%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
            DL  GK  H+ + N     +  L N ++ MY+ CG +  A  +F  M +RD+ISW +I+
Sbjct: 233 KDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIV 292

Query: 127 AAYAHSGEGN--------------------------AENVTEGFRLFRSLRESITFTSRL 160
           + + + GE +                          +    E   LFR+++ +       
Sbjct: 293 SGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEF 352

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+  +L  C   G +   E +  Y  +  +  D FV  AL+++Y K G + +A+ +F  M
Sbjct: 353 TMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM 412

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +RD   W  M+   A NG GE+   +F ++ ++ + PD+ +   VL   +  G
Sbjct: 413 SQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 466



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 67/350 (19%)

Query: 66  TSDLLL--GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           T D+ L  G+  H  +L      + F+   L+ MY  CG L  AR +FD  P  D+I+WN
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
            I++AY   G+       E  RLF  + +     + +TL  +L  C     +   + VH 
Sbjct: 189 MIISAYNKVGK-----FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243

Query: 184 YALKIGLVWDEFVSGALVNIY-------------------------------SKFGKIRE 212
           Y     +  +  +  A++++Y                               +  G+I  
Sbjct: 244 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDV 303

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
           A+  FD M E+D V W  M+  Y  +   +E   LF ++  + + PD+ ++  VL   + 
Sbjct: 304 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAH 363

Query: 273 LGKRH-EEQVQAY----AIKLLLYNNNSNVVL------------------------WNKK 303
           LG     E ++ Y     IK  L+  N+ + +                        W   
Sbjct: 364 LGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAM 423

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           + G    G    A++ F NM+++++  D +T++  L+A   T  ++ G++
Sbjct: 424 IVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK 473



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 21/227 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LG+     I  +    D F+ N L+ MY +CG +  A  +F +M  R
Sbjct: 356 SVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR 415

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D  +W +++   A +G G      +   +F ++ ++      +T   +L  C  +G V  
Sbjct: 416 DKFTWTAMIVGLAVNGHGE-----KALDMFSNMLKASILPDEITYIGVLSACTHTGLV-- 468

Query: 178 SETVHGYALKI----GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            +    Y L++    G+  +    G LV++ ++ G+++EA  + + M  + + ++W  +L
Sbjct: 469 -DKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 527

Query: 233 ---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
              R Y E+   E V    ++L      PD+ +V  +L  I    KR
Sbjct: 528 AGCRVYRESDMAEMVVKQILELE-----PDNGAVYVLLCNIYAACKR 569


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 238/814 (29%), Positives = 404/814 (49%), Gaps = 81/814 (9%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H+ ++    +     +  L+ MY++CG L    +LFD+    D + WN +L+ Y+
Sbjct: 55  LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 114

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            SG+ +A+ V + FR   S  E     S +T+A +L +C  SG +   ++VHGY +K G 
Sbjct: 115 RSGKNDAD-VMKVFRAMHSSGE--VMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGF 171

Query: 191 VWDEFVSGALVNIYSKFGKIR-EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
             D F   ALV++Y+K G +  +A  +FD +  +DVV W  M+   AENG  +E F LF 
Sbjct: 172 EMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFS 231

Query: 250 DLHRSGLCPDDESVQCVLGVIS----DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            + +  + P+  +V  +L V +    ++  R   Q+ +Y ++      +++V + N  LS
Sbjct: 232 LMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQW--PELSADVSVCNALLS 289

Query: 306 GYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
            YL+VG    A   F  M  R  V ++++                 G  ++G  LKS   
Sbjct: 290 FYLKVGRTKEAESLFWAMDARDLVSWNTII---------------AGYALNGEWLKS--- 331

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV- 423
                    ++++  +  +  L  D  T+ S+L A + L + L   KQ+H + +++  + 
Sbjct: 332 ---------LHVFGNLVSLEMLLLDSVTMVSILPACAQL-DNLQAGKQVHAYILRHPFLF 381

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            D+    AL+  Y + G + EA + F      DL +WN+++  +    +  + L L   M
Sbjct: 382 EDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVM 441

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC-----VSSGILDMYV 538
                R D +TI T +  C  LL +K+ K++H Y+++SG    LC     V + ILD Y 
Sbjct: 442 LKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSL--LCATAPTVGNAILDAYS 499

Query: 539 KCGAM--------------------------------VDAQSIFNDIPAPDDVAWTTMIS 566
           KCG +                                 DA  IF+ +   D   W  M+ 
Sbjct: 500 KCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVR 559

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
              +N   + AL ++ +++  G+ PD  T   L+   + + ++   RQ H  +I+     
Sbjct: 560 VYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIR-SSFE 618

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D  +  +L+D YAKCG I  AY +F+    ++ V++ AM+ G A HG  E+ L+ F  M 
Sbjct: 619 DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHML 678

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G++PD V F  +LSACS+ G ++E  + F  + + +G++P +E ++ +VD L R G  
Sbjct: 679 NMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHV 738

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            EA   +  +P EA+A++   LLGAC+   + E G+ VA+KL  +E  D   Y++LSN++
Sbjct: 739 SEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLY 798

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPADLIFAKVE 840
           AA ++WD V   R  M+ K++KK PA   + +VE
Sbjct: 799 AADDRWDGVMEVRKMMRNKDLKK-PAGCSWIEVE 831



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 175/329 (53%), Gaps = 9/329 (2%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
             + D   LA++L++ S+L    +L K +H + +K   V+    S AL+++Y + G + +
Sbjct: 32  AFKPDHEVLAAILKSCSALLAS-NLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDD 90

Query: 445 AEYLFENKDGFDLATWNAMIFGYILS-NNSHKALELFSHMHTSGERL-DEITIATAVKAC 502
              LF+     D   WN ++ GY  S  N    +++F  MH+SGE +   +TIAT +  C
Sbjct: 91  CHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVC 150

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV-DAQSIFNDIPAPDDVAW 561
                L  GK +H Y +KSGFE+D    + ++ MY KCG +  DA ++F+ I   D V+W
Sbjct: 151 ARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSW 210

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL---TALEQGRQIHAN 618
             MI+G  +NG    A S++  M    V P+  T A ++   +      A   GRQIH+ 
Sbjct: 211 NAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSY 270

Query: 619 LIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           +++  + S+D  V  +L+  Y K G  ++A  LF  MD R+ V WN ++ G A +G   +
Sbjct: 271 VLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLK 330

Query: 678 TLKLFEDMKA-HGVEPDSVTFIGVLSACS 705
           +L +F ++ +   +  DSVT + +L AC+
Sbjct: 331 SLHVFGNLVSLEMLLLDSVTMVSILPACA 359



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 193/413 (46%), Gaps = 61/413 (14%)

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--CGLRTDQF--------------- 391
           NLG+ +H   +K G  S  +   +L+NMY+K G +  C    DQF               
Sbjct: 54  NLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGY 113

Query: 392 --------TLASVLRASSS----LPEGLHLS---------------KQIHVHAIKNDTVA 424
                    +  V RA  S    +P  + ++               K +H + IK+    
Sbjct: 114 SRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEM 173

Query: 425 DSFVSTALIDVYCRNGSMA-EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           D+F   AL+ +Y + G +A +A  +F++    D+ +WNAMI G   +    +A  LFS M
Sbjct: 174 DTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLM 233

Query: 484 HTSGERLDEITIATAVKACGCL---LMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVK 539
                + +  T+A  +  C      +  + G+Q+H+Y ++      D+ V + +L  Y+K
Sbjct: 234 MKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLK 293

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAI 598
            G   +A+S+F  + A D V+W T+I+G   NGE   +L ++  +  L  ++ D  T   
Sbjct: 294 VGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVS 353

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFV------GISLVDMYAKCGNIEDAYILFK 652
           ++ A + L  L+ G+Q+HA +++      PF+      G +LV  YAKCG IE+AY  F 
Sbjct: 354 ILPACAQLDNLQAGKQVHAYILR-----HPFLFEDTSAGNALVSFYAKCGYIEEAYHTFS 408

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            +  ++ + WN++L    +  +    L L   M    + PDSVT + ++  C+
Sbjct: 409 MISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCA 461



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 172/369 (46%), Gaps = 10/369 (2%)

Query: 459 TWNAMIFGYILSNNSHKALELFSHM--HTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           TW + I    + +  ++AL  F H    ++  + D   +A  +K+C  LL    GK +H+
Sbjct: 2   TWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHS 61

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           Y +K G       S  +L+MY KCG + D   +F+     D V W  ++SG   +G+ D 
Sbjct: 62  YVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDA 121

Query: 577 -ALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
             + ++  M  SG V+P   T A ++   +    L  G+ +H  +IK     D F G +L
Sbjct: 122 DVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNAL 181

Query: 635 VDMYAKCGNIE-DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           V MYAKCG +  DAY +F  +  ++ V WNAM+ GLA++G  +E   LF  M    V+P+
Sbjct: 182 VSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPN 241

Query: 694 SVTFIGVLSACSY--TGLVSEAYENFHLMREKYG-IEPEVEHYSFLVDALGRAGRTKEAG 750
             T   +L  C+     +        H    ++  +  +V   + L+    + GRTKEA 
Sbjct: 242 YATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAE 301

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
            L  +M      S +  + G   + G+      V   L++LE     +  ++S I  A  
Sbjct: 302 SLFWAMDARDLVSWNTIIAGY-ALNGEWLKSLHVFGNLVSLEMLLLDSVTMVS-ILPACA 359

Query: 811 QWDDVTSAR 819
           Q D++ + +
Sbjct: 360 QLDNLQAGK 368


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 224/785 (28%), Positives = 381/785 (48%), Gaps = 80/785 (10%)

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           WNSI+    H+   N   +   +    SL   IT  S  T+  +LK C     +     +
Sbjct: 28  WNSIIKH--HTKLKNDHAILSTYTQMESL--GITPDSA-TMPLVLKACGRLNAIGNGVRI 82

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H     + L+ D  V  ALV+ Y K G + EA  +F  M ERD+V W  ++  Y      
Sbjct: 83  HSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCY 142

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNNS----- 295
           +E   LFV++ ++GL P+  +V  +L    + L  R  +++  Y ++  L++ ++     
Sbjct: 143 KEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202

Query: 296 -----------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                                  N+V WN  ++G+L VGD   A++ + +M+   +++D+
Sbjct: 203 LVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDA 262

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG------- 385
           VT LV + A A    L LG Q+H   +K    + + + N+L+NMYS  G +         
Sbjct: 263 VTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNA 322

Query: 386 ------------------------------------LRTDQFTLASVLRASSSLPEGLHL 409
                                               ++ D  T+A +L   + L +G   
Sbjct: 323 VPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW 382

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            + +H HA+K+    D+++  AL+ +Y ++  +  A+Y+FE   G D+ +WN MI  +  
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ 442

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S    KA ELF  M  S  + +  TI + +  C     L  G+ +H +A+K+G E++  +
Sbjct: 443 SMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSL 502

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           ++ + +MY+ CG    A ++F   P  D V+W ++IS  + N     AL +++ M +S +
Sbjct: 503 NTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISEL 561

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS--SDPFVGISLVDMYAKCGNIEDA 647
            P+  T   ++ + + L  L  G+ +HA   + + S   D  +  + + MYA+CG ++ A
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F  +  R+ V WNAM+ G   HG G +    F  M   G +P++V+F  VLSACS++
Sbjct: 622 EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHS 681

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GL     + FH M   +GI P++ HY  +VD LGR G   EA   I SMP E  AS+ RA
Sbjct: 682 GLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRA 741

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL +C+++ + +  + +  KL+ LEP +   ++LLSNI+AAA  W +V   R  ++ + +
Sbjct: 742 LLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGL 801

Query: 828 KKDPA 832
            K P 
Sbjct: 802 GKPPG 806



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 225/563 (39%), Gaps = 125/563 (22%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG   H   +  + I D F+ N L+ MYS  GSL  +  LF+ +P  D   WNS++++
Sbjct: 278 LRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISS 337

Query: 129 YAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC--LSSGYVWASETVHGYA 185
           Y   G        E   LF  +R E I    R T+A +L LC  L+ G +W    +H +A
Sbjct: 338 YIGFGFH-----AEAIALFIKMRLERIKEDVR-TIAIMLSLCNDLNDGSIWG-RGLHAHA 390

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G+  D ++  AL+++Y K  +I  A+++F+ M+  DV+ W  M+ A+A++ F  + F
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLLLYNNNS----- 295
            LF+ +  S +  +  ++  +L    D      G+     +  +AIK  L  N S     
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGR----SIHGFAIKNGLEINTSLNTSL 506

Query: 296 -----------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                                  ++V WN  +S Y++  DN G      N + S ++ +S
Sbjct: 507 TEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIK-NDNAGKALLLFNHMISELEPNS 565

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKS--GFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           VT +  L +     +L LGQ +H  T +          + N+ I MY++ G         
Sbjct: 566 VTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCG--------- 616

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLF 449
                               K  +   I       S VS  A+I  Y  +G   +A   F
Sbjct: 617 --------------------KLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAF 656

Query: 450 EN--KDGFDLATWNAMIFGYILSNNSHK-----ALELFSHMHTSGERLDEITIATAVKAC 502
                DGF     N + F  +LS  SH       L+LF  M      + +  IA  +   
Sbjct: 657 AQMLDDGFKP---NNVSFASVLSACSHSGLTVTGLQLFHSM------VRDFGIAPQLTHY 707

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAW 561
           GC+                            +D+  + G   +A +  N +P  PD   W
Sbjct: 708 GCM----------------------------VDLLGRGGHFSEAIAFINSMPIEPDASIW 739

Query: 562 TTMISGCVDNGEEDLALSIYHQM 584
             ++S C       L  +I+ ++
Sbjct: 740 RALLSSCQIKSNNKLLETIFGKL 762



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 13/258 (5%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           + S+F +  +R   +F L L+    +  F+S +      S+L      SDL+ G+S H  
Sbjct: 436 MISAFAQSMFRA-KAFELFLMMCESEIKFNSYTI----VSLLAFCKDGSDLVFGRSIHGF 490

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
            + +    +  L  +L  MY  CG    A  +F + P RDL+SWNS++++Y  +     +
Sbjct: 491 AIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKN-----D 545

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--IGLVWDEFV 196
           N  +   LF  +   +   S +T+  +L  C    ++   + +H Y  +  + L  D  +
Sbjct: 546 NAGKALLLFNHMISELEPNS-VTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASL 604

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + A + +Y++ GK++ A+ +F  +Q R +V W  M+  Y  +G G +    F  +   G 
Sbjct: 605 ANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGF 664

Query: 257 CPDDESVQCVLGVISDLG 274
            P++ S   VL   S  G
Sbjct: 665 KPNNVSFASVLSACSHSG 682


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 220/710 (30%), Positives = 368/710 (51%), Gaps = 82/710 (11%)

Query: 256 LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
           LCP  +S   +L  + DL  +  +Q+ A  I   L     N  L N  ++ Y+  G    
Sbjct: 20  LCPLAQSHASILRKLKDL--KPLQQIHAQIITSGL---THNTFLSNSLMNAYVYCGLLAD 74

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A + F +    NV    V++ + ++ +A  D                F  A+ V   +  
Sbjct: 75  AKQIFHHTPCKNV----VSWTILISGLAKND---------------CFVEAIDVFREM-- 113

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
               MG     + +  T++SVL A ++L   + ++K +H   ++     + FV TAL+D+
Sbjct: 114 ---TMG---NFKPNAVTISSVLPAFANLGL-IRIAKSVHCFWVRGGFEGNVFVETALVDM 166

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G M  A  LFE+    ++ +WNA++ GY     S +A++LF+ M   G  +D  TI
Sbjct: 167 YSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTI 226

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + + A   +  L+ G  +H + +++G+E D  + + ++D+YV    + DA  +F+++  
Sbjct: 227 MSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFV 286

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
            D  AWT M++G       D A+  +++M  +  +  D      ++ + S   AL+QGR+
Sbjct: 287 KDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRR 346

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +HA  IK   +++ FVG +++DMYA CGN+EDA   F  M  ++ V WNAM+ G   +G 
Sbjct: 347 VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGY 406

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF-HLMREKYGIEPEVEHY 733
           G + + LF  MK  G++PD  TF+ VL ACS+ G+V E  + F H+++  + I P ++HY
Sbjct: 407 GTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDI-PNLQHY 465

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + ++D LGRAG+   A   I +MPF+    ++  LLGACR+ G+ + G  +++K+  +EP
Sbjct: 466 ACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEP 525

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------DL 834
            D+  YVLLSN++A A  W+ V   R  ++ K +KKDP                      
Sbjct: 526 NDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHP 585

Query: 835 IFAKVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
            + K+EG++K    +IK+ GYVP+T+ +L DV ++ K+  LY+HSEK+A A+GL+ T P 
Sbjct: 586 QYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPG 645

Query: 891 SVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           ++I   K                           ANRFH  +DG+C C D
Sbjct: 646 TIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 150/634 (23%), Positives = 269/634 (42%), Gaps = 112/634 (17%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           YR+L S     L  L +SH S          ILR      DL   +  HA+I+ S    +
Sbjct: 9   YRHLSSNPTQRLCPLAQSHAS----------ILR---KLKDLKPLQQIHAQIITSGLTHN 55

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            FL+N+LM  Y  CG L  A+++F   P ++++SW  ++     SG    +   E   +F
Sbjct: 56  TFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILI-----SGLAKNDCFVEAIDVF 110

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           R +       + +T++ +L    + G +  +++VH + ++ G   + FV  ALV++YSKF
Sbjct: 111 REMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG----------LC 257
           G +  A+ LF+ M ER+VV W  ++  Y+++GF EE   LF  + R G          L 
Sbjct: 171 GCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230

Query: 258 PDDESVQC------VLGVISDLGKRHEEQVQAYAIKLLLYNNN-------------SNVV 298
           P   SV C      + G I   G  +++ ++   + + + +N               +V 
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVA 290

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            W   L+G+        AI+ F  M+   N++ DS+  +  L++ + +  L  G+++H  
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHAL 350

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            +K+ F + + VG+++I+MY+     CG   D                    +K+     
Sbjct: 351 AIKTCFANNIFVGSAVIDMYAN----CGNLED--------------------AKRF---- 382

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                    F      DV C N  +A         D  DL                    
Sbjct: 383 ---------FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDL-------------------- 413

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDM 536
             F  M  SG   DE T  + + AC    M+ +G Q+  + +K+  ++ +L   + ++D+
Sbjct: 414 --FLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDI 471

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
             + G +  A S  N++P  PD   ++T++  C  +G   L   I    ++  + P++  
Sbjct: 472 LGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI--SQKIFEMEPNDAG 529

Query: 596 FAILVKASSCLTALEQG-RQIHANLIKLDCSSDP 628
           + +L+     L    +G +   A+L       DP
Sbjct: 530 YYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDP 563


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 211/576 (36%), Positives = 311/576 (53%), Gaps = 56/576 (9%)

Query: 364 YSAVIVGNSL-------INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           ++ +I GNSL       I+ Y +M  +CG+  + +T   +L++ + +       KQIH H
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRM-LLCGVEPNSYTFPFLLKSCAKV-GATQEGKQIHGH 157

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEY----------------------------- 447
            +K    +D FV T+LI++Y +NG +  AE                              
Sbjct: 158 VLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDA 217

Query: 448 --LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             LFE     D  +WNAMI GY  S    +AL  F  M  +    +E T+ T + AC   
Sbjct: 218 RRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQS 277

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+ G  + ++    G   +L + + ++DMY KCG +  A+ +F  I   D ++W  MI
Sbjct: 278 GSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMI 337

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G         AL+++ +M+ S V P++ TF  ++ A + L AL+ G+ IHA + K    
Sbjct: 338 GGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK---- 393

Query: 626 SDPFVGI-------SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
              F+G+       SL+DMYAKCGNIE A  +F  M  ++   WNAM+ GLA HG+    
Sbjct: 394 --KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMA 451

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L+LF  M+  G EPD +TF+GVLSACS+ GLV    + F  M E Y I P+++HY  ++D
Sbjct: 452 LELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMID 511

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            LGRAG   EA  L+ +M  +   ++  +LLGACRV G+ E G++ A+ L  LEP +  A
Sbjct: 512 LLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGA 571

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKE-GGYVPDTDF 857
           YVLLSNI+A A +WDDV   R ++  K +KK     I+  ++ + +   E  G VPDT  
Sbjct: 572 YVLLSNIYATAGRWDDVARIRTKLNDKGMKK--XQDIYKMLDEIDQSFGERPGXVPDTSE 629

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
           VL D++EE KE +L +HSEKLA A+GLIST P + I
Sbjct: 630 VLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTI 665



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 35/394 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC---RNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           KQIH   IK       F  + LI+ +C     G+++ A  LFE+ +  +   WN MI G 
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            LS++   A++ +  M   G   +  T    +K+C  +   ++GKQ+H + +K G E D 
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167

Query: 528 CVSSGILDMYVKC-------------------------------GAMVDAQSIFNDIPAP 556
            V + +++MY +                                G + DA+ +F +IP  
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W  MI+G   +G  + AL+ + +M+ + V P+E T   ++ A +   +LE G  + 
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           + +      S+  +  +L+DMY+KCG+++ A  LF+ +  ++ + WN M+ G +   + +
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L LF  M+   VEP+ VTF+ +L AC+Y G +         + +K+        ++ L
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           +D   + G  + A ++   M  ++  S +  + G
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 240/519 (46%), Gaps = 36/519 (6%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNI--YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           + +H   +K GL   +F    L+     S FG +  A  LF+ +++ +  +W  M+R  +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNS 295
            +         +V +   G+ P+  +   +L   + +G   E +Q+  + +KL L    S
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGL---ES 165

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +  +    ++ Y Q G+   A   F    +S+++ D+V+F   +        L+  +++ 
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFS---KSSLR-DAVSFTALITGYTLRGCLDDARRL- 220

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV------------CGLRTDQFTLASVLRA---S 400
               +       +  N++I  Y++ G                +  ++ T+ +VL A   S
Sbjct: 221 ---FEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQS 277

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
            SL  G  +   I  H + ++      +  ALID+Y + G + +A  LFE     D+ +W
Sbjct: 278 GSLELGNWVRSWIEDHGLGSNLR----LVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N MI GY   N+  +AL LF  M  S    +++T  + + AC  L  L  GK +HAY  K
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK 393

Query: 521 SGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
               L +  + + ++DMY KCG +  A+ +F  +      +W  MISG   +G  ++AL 
Sbjct: 394 KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALE 453

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMY 638
           ++ QMR  G  PD+ TF  ++ A S    +E GRQ  +++++  D S        ++D+ 
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLL 513

Query: 639 AKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            + G  ++A  L K M+M+ +  +W ++L     HGN E
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 43/309 (13%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + + S + D      L+T Y+  G L  ARRLF+++P RD +SWN+++A YA SG     
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR---- 244

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
              E    F+ ++ +    +  T+  +L  C  SG +     V  +    GL  +  +  
Sbjct: 245 -FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVN 303

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++YSK G + +A+ LF+G+ E+D++ W VM+  Y+     +E   LF  + +S + P
Sbjct: 304 ALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEP 363

Query: 259 DDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNSNVVL-------------- 299
           +D +   +L   +     DLGK     + AY  K  L   N+++                
Sbjct: 364 NDVTFVSILPACAYLGALDLGK----WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEA 419

Query: 300 ---------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                          WN  +SG    G  + A+E F  M     + D +TF+  L+A + 
Sbjct: 420 AKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSH 479

Query: 345 TDNLNLGQQ 353
              + LG+Q
Sbjct: 480 AGLVELGRQ 488



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 8/243 (3%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  +L  F +    + + + S   ++L     +  L LG    + I +     +  L N 
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MYS+CG L  AR LF+ + ++D+ISWN ++  Y+H       +  E   LFR +++S
Sbjct: 305 LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH-----MNSYKEALALFRKMQQS 359

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIR 211
               + +T   +L  C   G +   + +H Y  K  +GL  +  +  +L+++Y+K G I 
Sbjct: 360 NVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIE 418

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            AK +F GM+ + +  W  M+   A +G       LF  +   G  PDD +   VL   S
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478

Query: 272 DLG 274
             G
Sbjct: 479 HAG 481



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 178/432 (41%), Gaps = 96/432 (22%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKS------THARILNSSQ 84
           L SFS SL+      HF  +S     + +L++  S + L   KS       H++I+ +  
Sbjct: 3   LASFSPSLVMPPPTLHFQPTSDPP--YKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGL 60

Query: 85  IPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
              +F  + L+     S  G+L YA  LF+ +   +   WN+++        GN+     
Sbjct: 61  HNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMI-------RGNS----- 108

Query: 143 GFRLFRSLRESITFTSRL----------TLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
              L  S   +I F  R+          T   LLK C   G     + +HG+ LK+GL  
Sbjct: 109 ---LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165

Query: 193 DEFVSGALVNIYSKFGK-------------------------------IREAKFLFDGMQ 221
           D FV  +L+N+Y++ G+                               + +A+ LF+ + 
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR 276
            RD V W  M+  YA++G  EE    F ++ R+ + P++ ++  VL   +     +LG  
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNW 285

Query: 277 HEEQVQAYAI--KLLLYNN----------------------NSNVVLWNKKLSGYLQVGD 312
               ++ + +   L L N                         +++ WN  + GY  +  
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNS 345

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGN 371
              A+  F  M +SNV+ + VTF+  L A A    L+LG+ IH    K     +   +  
Sbjct: 346 YKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405

Query: 372 SLINMYSKMGCV 383
           SLI+MY+K G +
Sbjct: 406 SLIDMYAKCGNI 417


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 200/555 (36%), Positives = 306/555 (55%), Gaps = 48/555 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK   +   ++ T LI  Y +  S+ +A ++F+     ++ +W AMI  Y   
Sbjct: 78  QRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQR 137

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             + +AL LF  M  SG   +E T AT + +C        G+Q+H++ +K  +E  + V 
Sbjct: 138 GYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVG 197

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K G + +A+ IF  +P  D V+ T +ISG    G ++ AL ++ +++  G+ 
Sbjct: 198 SSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQ 257

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  T+  ++ A S L AL+ G+Q+H +L++ +  S   +  SL+DMY+KCGN+  A  +
Sbjct: 258 SNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRI 317

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGL 709
           F  +  R  + WNAMLVG ++HG G E L+LF  M   + V+PDSVT + VLS CS+ GL
Sbjct: 318 FDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGL 377

Query: 710 VSEAYENFHLMRE-KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
             +  + F+ M   K  ++P+ +HY  +VD LGRAGR + A E +  MPFE SA++   L
Sbjct: 378 EDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCL 437

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGAC V  + + G++V  +L+ +EP ++  YV+LSN++A+A +W+DV S R  M +K V 
Sbjct: 438 LGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVT 497

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                        + + AKV+ L  R KE GYVPD   VL DV+EE
Sbjct: 498 KEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEE 557

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA-------- 902
           +KE+ L  HSEKLA  +GLI+TP S  I   K                 +Y         
Sbjct: 558 QKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDK 617

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH +  G C C D
Sbjct: 618 NRFHRIVGGKCSCGD 632



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 156/285 (54%), Gaps = 25/285 (8%)

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKA--------------CGCLLMLKQGKQMHA 516
           +NSH  L +  H+H +  RL E  +  A++               C     +++G+++HA
Sbjct: 27  SNSHHVLNI--HIHDT--RLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHA 82

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           + +K+ +   + + + ++  YVKC ++ DA+ +F+ +P  + V+WT MIS     G    
Sbjct: 83  HMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQ 142

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           ALS++ QM  SG  P+EFTFA ++ +    +    GRQIH+++IKL+  +  +VG SL+D
Sbjct: 143 ALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLD 202

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAK G I +A  +F+ +  R+ V   A++ G AQ G  EE L+LF  ++  G++ + VT
Sbjct: 203 MYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVT 262

Query: 697 FIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDAL 740
           +  VL+A S    +    + + HL+R       EV  Y  L ++L
Sbjct: 263 YTSVLTALSGLAALDHGKQVHNHLLRS------EVPSYVVLQNSL 301



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 37/317 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L   +    +  G+  HA ++ +  +P  +L   L+  Y +C SL  AR +FD MP+R
Sbjct: 63  TVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPER 122

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL-SSGYVW 176
           +++SW ++++AY+  G       ++   LF  +  S T  +  T A +L  C+ SSG+V 
Sbjct: 123 NVVSWTAMISAYSQRGYA-----SQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVL 177

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +H + +K+      +V  +L+++Y+K GKI EA+ +F  + ERDVV    ++  YA
Sbjct: 178 GRQ-IHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYA 236

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQ------------- 282
           + G  EE   LF  L R G+  +  +   VL  +S L    H +QV              
Sbjct: 237 QLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVV 296

Query: 283 ---------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                           YA ++    +   V+ WN  L GY + G+    +E F  MI  N
Sbjct: 297 LQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDEN 356

Query: 328 -VQYDSVTFLVALAAVA 343
            V+ DSVT L  L+  +
Sbjct: 357 KVKPDSVTVLAVLSGCS 373



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 5/294 (1%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   ++FT A+VL  S     G  L +QIH H IK +  A  +V ++L+D+Y ++G + E
Sbjct: 154 GTEPNEFTFATVL-TSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHE 212

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D+ +  A+I GY       +ALELF  +   G + + +T  + + A   
Sbjct: 213 ARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSG 272

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  GKQ+H + ++S     + + + ++DMY KCG +  A+ IF+ +     ++W  M
Sbjct: 273 LAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAM 332

Query: 565 ISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI--K 621
           + G   +GE    L +++ M   + V PD  T   ++   S     ++G  I  ++   K
Sbjct: 333 LVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGK 392

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           +    D      +VDM  + G +E A+   K+M    +  +W  +L   + H N
Sbjct: 393 ISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSN 446



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 144/337 (42%), Gaps = 50/337 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +S Y Q G    A+  FV M+RS  + +  TF   L +  G+    LG+QIH
Sbjct: 123 NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIH 182

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV--------C----------------------- 384
              +K  + + V VG+SL++MY+K G +        C                       
Sbjct: 183 SHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDE 242

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++++  T  SVL A S L   L   KQ+H H ++++  +   +  +L
Sbjct: 243 EALELFRRLQREGMQSNYVTYTSVLTALSGLA-ALDHGKQVHNHLLRSEVPSYVVLQNSL 301

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           ID+Y + G++  A  +F+      + +WNAM+ GY       + LELF+ M    + + D
Sbjct: 302 IDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPD 361

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSG---FELDLCVSSGILDMYVKCGAMVDAQS 548
            +T+   +  C    +  +G  +  Y M SG    + D      ++DM  + G +  A  
Sbjct: 362 SVTVLAVLSGCSHGGLEDKGMDIF-YDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFE 420

Query: 549 IFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
               +P  P    W  ++  C  +   D+   + HQ+
Sbjct: 421 FVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQL 457



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 20/253 (7%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R   S +LSL  F+Q     +  +   + ++L   I +S  +LG+  H+ I+  +     
Sbjct: 137 RGYASQALSL--FVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHV 194

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           ++ ++L+ MY++ G +  AR +F  +P+RD++S  +I++ YA  G        E   LFR
Sbjct: 195 YVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDE-----EALELFR 249

Query: 149 SLRES------ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
            L+        +T+TS LT    L   L  G     + VH + L+  +     +  +L++
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLA-ALDHG-----KQVHNHLLRSEVPSYVVLQNSLID 303

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF-VDLHRSGLCPDDE 261
           +YSK G +  A+ +FD + ER V+ W  ML  Y+++G G EV  LF + +  + + PD  
Sbjct: 304 MYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSV 363

Query: 262 SVQCVLGVISDLG 274
           +V  VL   S  G
Sbjct: 364 TVLAVLSGCSHGG 376


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 214/620 (34%), Positives = 336/620 (54%), Gaps = 78/620 (12%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK------NDTVADS- 426
           I+ Y +M  V G R D F   +VL+A S L + L   +QIH  A+K      + TVA++ 
Sbjct: 77  ISTYIEM-TVSGARPDNFAFPAVLKAVSGL-QDLKTGEQIHAAAVKFGYGSSSVTVANTL 134

Query: 427 --------------FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
                         F + AL+ +Y + G + +++ LFE+    D+ +WN MI  +  S+ 
Sbjct: 135 VNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 194

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC-VSS 531
             +AL  F  M   G  LD +TIA+ + AC  L  L  GK++HAY +++   ++   V S
Sbjct: 195 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 254

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVV 590
            ++DMY  C  +   + +F+ I       W  MISG   NG ++ AL ++ +M +++G++
Sbjct: 255 ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLL 314

Query: 591 PDEFTFAILVKAS-SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
           P+  T A ++ A    L A+ +G++IHA  I+   +SD  VG +LVDMYAKCG +  +  
Sbjct: 315 PNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 374

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-----VEPDSVTFIGVLSAC 704
           +F +M  +N + WN +++    HG GEE L+LF++M A        +P+ VTFI V +AC
Sbjct: 375 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 434

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE-ASAS 763
           S++GL+SE    F+ M+  +G+EP  +HY+ +VD LGRAG+ +EA EL+ +MP E     
Sbjct: 435 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG 494

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
              +LLGACR+  + E G+  A+ L+ LEP  +S YVLLSNI+++A  W+     R  M+
Sbjct: 495 AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 554

Query: 824 RKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
           +  VKK+P                       ++ +   +E L +++++ GYVPDT  VL 
Sbjct: 555 QMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLH 614

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN----------------- 903
           +V+E+EKE  L  HSEKLA A+G+++TPP + I   K     N                 
Sbjct: 615 NVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREI 674

Query: 904 ------RFHHLRDGMCPCAD 917
                 RFHH ++G C C D
Sbjct: 675 IVRDVRRFHHFKEGTCSCGD 694



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 163/345 (47%), Gaps = 24/345 (6%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           A+W   +     SN+  +A+  +  M  SG R D       +KA   L  LK G+Q+HA 
Sbjct: 58  ASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAA 117

Query: 518 AMKSGF-ELDLCVSSGILDMYVKCGAMV--------------------DAQSIFNDIPAP 556
           A+K G+    + V++ +++MY KCG +                     D++++F      
Sbjct: 118 AVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDR 177

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W TMIS    +     AL+ +  M L GV  D  T A ++ A S L  L+ G++IH
Sbjct: 178 DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIH 237

Query: 617 ANLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           A +++  D   + FVG +LVDMY  C  +E    +F  +  R   LWNAM+ G A++G  
Sbjct: 238 AYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLD 297

Query: 676 EETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           E+ L LF +M K  G+ P++ T   V+ AC ++       +  H    +  +  ++   S
Sbjct: 298 EKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGS 357

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
            LVD   + G    +  +   MP +   + +  L+ AC + G  E
Sbjct: 358 ALVDMYAKCGCLNLSRRVFNEMPNKNVITWN-VLIMACGMHGKGE 401



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 50/329 (15%)

Query: 85  IPDRFLTNN-LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEG 143
           I D+  TNN LM MY++ G +  ++ LF+   DRD++SWN+++++++ S     +  +E 
Sbjct: 144 IGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS-----DRFSEA 198

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG-LVWDEFVSGALVN 202
              FR +         +T+A +L  C     +   + +H Y L+   L+ + FV  ALV+
Sbjct: 199 LAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVD 258

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDE 261
           +Y    ++   + +FD +  R + LW  M+  YA NG  E+   LF+++ + +GL P+  
Sbjct: 259 MYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTT 318

Query: 262 SVQCVLG--VISDLGKRHEEQVQAYAIKLLLYNN-------------------------- 293
           ++  V+   V S       +++ AYAI+ +L ++                          
Sbjct: 319 TMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNE 378

Query: 294 --NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-----SNVQYDSVTFLVALAAVAG-- 344
             N NV+ WN  +      G    A+E F NM+         + + VTF+   AA +   
Sbjct: 379 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438

Query: 345 --TDNLNLGQQI---HGTTLKSGFYSAVI 368
             ++ LNL  ++   HG    S  Y+ V+
Sbjct: 439 LISEGLNLFYRMKHDHGVEPTSDHYACVV 467



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/450 (22%), Positives = 173/450 (38%), Gaps = 105/450 (23%)

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQV 281
           R    W   LR+   +    E    ++++  SG  PD+ +   VL  +S L   +  EQ+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 282 QAYAIKL-------------------------LLYNNNS--------------------- 295
            A A+K                            + NN+                     
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              ++V WN  +S + Q      A+  F  M+   V+ D VT    L A +  + L++G+
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 353 QIHGTTLKSG-FYSAVIVGNSLINMYS--------------------------------- 378
           +IH   L++        VG++L++MY                                  
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294

Query: 379 -----------KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                      +M  V GL  +  T+ASV+ A       +   K+IH +AI+N   +D  
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V +AL+D+Y + G +  +  +F      ++ TWN +I    +     +ALELF +M    
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 414

Query: 488 ER-----LDEITIATAVKACGCLLMLKQGKQMHAYAMK--SGFELDLCVSSGILDMYVKC 540
            R      +E+T  T   AC    ++ +G  +  Y MK   G E      + ++D+  + 
Sbjct: 415 GRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-YRMKHDHGVEPTSDHYACVVDLLGRA 473

Query: 541 GAMVDAQSIFNDIPAPDDV--AWTTMISGC 568
           G + +A  + N +PA  D   AW++++  C
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGAC 503



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 79/174 (45%), Gaps = 21/174 (12%)

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
           P+    +W   +     + +   A+S Y +M +SG  PD F F  ++KA S L  L+ G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 614 QIHANLIKLD-CSSDPFVGISLVDMYAKCGNI--------------------EDAYILFK 652
           QIHA  +K    SS   V  +LV+MY KCG I                    +D+  LF+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
               R+ V WN M+   +Q     E L  F  M   GVE D VT   VL ACS+
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 226



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 8/186 (4%)

Query: 69  LLLGKSTHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L +GK  HA +L N+  I + F+ + L+ MY  C  +   RR+FD +  R +  WN++++
Sbjct: 230 LDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMIS 289

Query: 128 AYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSS-GYVWASETVHGYA 185
            YA +G        +   LF   ++ +    +  T+A ++  C+ S   +   + +H YA
Sbjct: 290 GYARNGLDE-----KALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYA 344

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           ++  L  D  V  ALV++Y+K G +  ++ +F+ M  ++V+ W V++ A   +G GEE  
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 404

Query: 246 HLFVDL 251
            LF ++
Sbjct: 405 ELFKNM 410



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA  + +    D  + + L+ MY++CG L  +RR+F++MP++++I+WN ++ A   
Sbjct: 337 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 396

Query: 132 SGEGNAENVTEGFRLFRSL-----RESITFTSRLTLAPLLKLCLSSGYV 175
            G+G      E   LF+++     R      + +T   +   C  SG +
Sbjct: 397 HGKGE-----EALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 440


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 221/670 (32%), Positives = 344/670 (51%), Gaps = 81/670 (12%)

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            Y+Q    H A   + +M+ + +  D+ T+ + + A +   +    +Q+H   LK GF S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQ---FTLASVLRASS------------SLPEGLHLS 410
            V V N+LIN +S    VC   TD    F  +SVL + S            ++ E  H+ 
Sbjct: 247 DVYVRNTLINCFS----VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIY 302

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            Q+   +I          S ++I ++   G + EA  LF+     D+ TW+A+I  +  +
Sbjct: 303 HQMPERSI--------IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQN 354

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +A+  F  MH  G  +DE+   +A+ AC  LL++  GK +H+ ++K G E  + + 
Sbjct: 355 EMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQ 414

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG-----CVDNGEE----------- 574
           + ++ MY KCG ++ A+ +F++    D ++W +MISG      VDN +            
Sbjct: 415 NALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVV 474

Query: 575 ---------------DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
                          D  L+++ +M++SG  PDE T   ++ A + L ALEQG+ +HA +
Sbjct: 475 SWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYI 534

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            +   + +  +G +L+DMY KCG +E A  +F  M  +    WNA+++GLA +G  E +L
Sbjct: 535 KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSL 594

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            +F +MK   V P+ +TF+GVL AC + GLV E   +F+ M   + I+P V+HY  +VD 
Sbjct: 595 DMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDL 654

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAG+ +EA EL+  MP     +   ALLGAC+  GD+E G+ V  KL+ L+P     +
Sbjct: 655 LGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFH 714

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           VLLSNI+A+  +WDDV   RG M +  V K P                        D I 
Sbjct: 715 VLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIE 774

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSN 896
             +  +  ++K  GY PD + VLLDV+EEEKE  L+ HSEKLA A+GLI+  P + I   
Sbjct: 775 DMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIM 834

Query: 897 KEPLYANRFH 906
           K     N  H
Sbjct: 835 KNLRICNDCH 844



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 246/539 (45%), Gaps = 46/539 (8%)

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
            F L++S+  +       T   L++ C      W ++ VH + LK+G   D +V   L+N
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            +S    + +A  +F+     D V W  +L  Y E G  EE  H++  +    +   +  
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 316

Query: 263 VQC--VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
           +    + G++ +  K  +E ++             ++V W+  ++ + Q      AI  F
Sbjct: 317 IVLFGMRGLVVEACKLFDEMLE------------KDMVTWSALIACFQQNEMYEEAIRTF 364

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           V M +  V  D V  + AL+A A    +N+G+ IH  +LK G  S + + N+LI MYSK 
Sbjct: 365 VGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKC 424

Query: 381 GCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
           G              ++ A     E   L               D     ++I  Y +  
Sbjct: 425 G-------------DIMVARKLFDEAYLL---------------DLISWNSMISGYLKCN 456

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            +  A+ +F++    D+ +W++MI GY  ++   + L LF  M  SG + DE T+ + + 
Sbjct: 457 LVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVIS 516

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L  L+QGK +HAY  ++G  +++ + + ++DMY+KCG +  A  +F  +       
Sbjct: 517 ACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIST 576

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  +I G   NG  + +L ++  M+   V P+E TF  ++ A   +  +++G+    ++I
Sbjct: 577 WNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMI 636

Query: 621 KLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGE 676
             D    P V     +VD+  + G +++A  L  +M M   V  W A+L    +HG+ E
Sbjct: 637 H-DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSE 694



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 209/503 (41%), Gaps = 89/503 (17%)

Query: 6   QANLKPRHKHTYVIFSSFTKDTY-RN--LPSFSL--SLLPFLQKSHFSSSSSSSQWFSIL 60
           ++  + +  H +V+   F  D Y RN  +  FS+  ++    +  + SS   S  W SIL
Sbjct: 227 RSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSIL 286

Query: 61  RHAISTSDLLLGKSTHARILNSSQIPDRFL--TNNLMTMYSRCGSLVYARRLFDKMPDRD 118
              I   ++   K  +       Q+P+R +  +N+++ ++   G +V A +LFD+M ++D
Sbjct: 287 AGYIEIGNVEEAKHIY------HQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKD 340

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           +++W++++A +  +     E   E  R F  + +       +     L  C +   V   
Sbjct: 341 MVTWSALIACFQQN-----EMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 395

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR--------------------------- 211
           + +H  +LKIG      +  AL+ +YSK G I                            
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 455

Query: 212 ----EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
                AK +FD M E+DVV W  M+  YA+N   +E   LF ++  SG  PD+ ++  V+
Sbjct: 456 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 515

Query: 268 GVISDLGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
              + L    + + V AY  +  L     NV+L    +  Y++ G    A+E F  MI  
Sbjct: 516 SACARLAALEQGKWVHAYIKRNGL---TINVILGTTLIDMYMKCGCVETALEVFYGMIEK 572

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
                          ++  + L LG  ++G               S ++M+S M   C +
Sbjct: 573 --------------GISTWNALILGLAMNGLV------------ESSLDMFSNMK-KCHV 605

Query: 387 RTDQFTLASVLRASSSL---PEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             ++ T   VL A   +    EG  H    IH H I+ +          ++D+  R G +
Sbjct: 606 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH----YGCMVDLLGRAGKL 661

Query: 443 AEAEYLFENKD-GFDLATWNAMI 464
            EAE L        D+ATW A++
Sbjct: 662 QEAEELLNRMPMTPDVATWGALL 684



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 27/246 (10%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L+L   +Q S F    ++    S++      + L  GK  HA I  +    +  L   L
Sbjct: 492 TLALFQEMQMSGFKPDETT--LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 549

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY +CG +  A  +F  M ++ + +WN+++   A +G      V     +F ++++  
Sbjct: 550 IDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL-----VESSLDMFSNMKKCH 604

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS------GALVNIYSKFG 208
              + +T   +L  C   G V   E  H +     ++ D  +       G +V++  + G
Sbjct: 605 VTPNEITFMGVLGACRHMGLV--DEGQHHF---YSMIHDHKIQPNVKHYGCMVDLLGRAG 659

Query: 209 KIREAKFLFDGM-QERDVVLWKVMLRAYAENG---FGEEVFHLFVDLHRSGLCPDDESVQ 264
           K++EA+ L + M    DV  W  +L A  ++G    G  V    ++L      PD +   
Sbjct: 660 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQ-----PDHDGFH 714

Query: 265 CVLGVI 270
            +L  I
Sbjct: 715 VLLSNI 720


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 225/720 (31%), Positives = 367/720 (50%), Gaps = 43/720 (5%)

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYV 175
           R    WN+++ A++ +  G      +GF  + R +R  +      T   +LKLC  S  +
Sbjct: 121 RTAFLWNTLIRAHSIAWNGT----FDGFETYNRMVRRGVQLDDH-TFPFVLKLCSDSFDI 175

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                VHG   K+G   D +V   L+ +Y   G + +A+ LFD M ERDVV W  ++   
Sbjct: 176 CKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLL 235

Query: 236 AENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN 293
           + NG + E   + F  + RS + P+  SV  +L + + L  +    ++  Y++K+ L   
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGL--- 292

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQ 352
           +S V   N  +  Y + G      + F   +  N V ++S+                   
Sbjct: 293 DSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSI------------------- 333

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
            I+G   K   + A+     +I+         G + +  T++S+L     L E     K+
Sbjct: 334 -INGLACKGRCWDALNAFRMMID--------AGAQPNSVTISSILPVLVEL-ECFKAGKE 383

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH  +++  T  D F++ +LID+Y ++G   EA  +F N D  ++ +WNAMI  Y L+  
Sbjct: 384 IHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRL 443

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
             +A+     M  +GE  + +T    + AC  L  L  GK++HA  ++ G   DL VS+ 
Sbjct: 444 PLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNS 503

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           ++DMY KCG +  A+++FN     D+V++  +I G  +  +   +L+++ +MRL G  PD
Sbjct: 504 LIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPD 562

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
             +F  ++ A + L AL+QG+++H   ++    S  FV  SL+D Y KCG I+ A  LF 
Sbjct: 563 VVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFN 622

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           Q+  ++   WN M++G    G  E  + +FE M+   V+ D V++I VLSACS+ GLV  
Sbjct: 623 QILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVER 682

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            ++ F  M  +  +EP   HY+ +VD LGRAG  +EA +LI  +P    A++  ALLGAC
Sbjct: 683 GWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGAC 741

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           R+ G+ E G+  AE L  L+P     Y+LLSNI+A   +WD+    R  MK +  KK+P 
Sbjct: 742 RIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPG 801


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 315/610 (51%), Gaps = 78/610 (12%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G++ D++T   + +  +     L   +Q+H H +K+    + FV TAL+ +Y   G +  
Sbjct: 134 GVKPDRYTFPFLFKGFTR-DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT 192

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D+ TWN +I  Y       ++  LF  M         +T+   + AC  
Sbjct: 193 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 252

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L+ GK++H+Y      E +L + + ++DMY  CG M  A  IF  +   D ++WTT+
Sbjct: 253 LKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 312

Query: 565 ISGCVDNGEEDLA-------------------------------LSIYHQMRLSGVVPDE 593
           +SG  + GE D+A                               L ++  M+ + V PDE
Sbjct: 313 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 372

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT   ++ A + L ALE G  I   + +    +D FV  +L+DMY KCG+++ A  +F++
Sbjct: 373 FTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 432

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  R+   W AM+VGLA +G+GE+ L +F +M    + PD +T+IGVLSAC++TGLV + 
Sbjct: 433 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKG 492

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F  M  ++GIEP + HY  LVD L RAGR KEA E+I +MP +A++ +  ALL  CR
Sbjct: 493 RKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCR 552

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA- 832
           V  +++  + V ++++ LEP + + YVLL NI+AA  +W+D+   R  M  K +KK P  
Sbjct: 553 VYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGC 612

Query: 833 ----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                   I AK++ + + +K  GY PD   V LD+ EE+KE +
Sbjct: 613 SLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENS 672

Query: 871 LYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHH 907
           ++ HSEKLA A+GLI++PP   I                     + N+E +  +  RFHH
Sbjct: 673 VFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHH 732

Query: 908 LRDGMCPCAD 917
            + G+C C D
Sbjct: 733 FKHGLCSCKD 742



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 248/547 (45%), Gaps = 79/547 (14%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI--YSKFGKIREAKFLFDGMQ 221
           PL+ L  +   +   + VH  A+K GL  +  +   ++      ++G  + A+ LFD + 
Sbjct: 41  PLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP 100

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQ 280
           E ++ +W  M+R Y+   F +    L++++ R G+ PD  +   +  G   D+   +  Q
Sbjct: 101 EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 160

Query: 281 VQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGD 312
           +  + +K  L  N                             ++V+ WN  +S Y +VG 
Sbjct: 161 LHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK 220

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              +   F+ M    V   +VT ++ L+A +   +L  G+++H         S +++ N+
Sbjct: 221 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENA 280

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           +I+MY+  G       +  +   + R+ ++               I   T+   F +   
Sbjct: 281 MIDMYADCG-------EMDSALGIFRSMNNR------------DIISWTTIVSGFTNLGE 321

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           IDV         A   F+     D  +W AMI GYI SN   +ALELF +M  +  + DE
Sbjct: 322 IDV---------ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 372

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+ + + AC  L  L+ G+ +  Y  ++  + DL V + ++DMY KCG +  A+SIF +
Sbjct: 373 FTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 432

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +   D   WT MI G   NG  + AL ++  M  + ++PDE T+  ++ A +    +++G
Sbjct: 433 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKG 492

Query: 613 RQ----------IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
           R+          I  N+    C         LVD+ A+ G +++AY + + M ++ N+++
Sbjct: 493 RKYFLRMTSQHGIEPNIAHYGC---------LVDLLARAGRLKEAYEVIENMPIKANSIV 543

Query: 662 WNAMLVG 668
           W A+L G
Sbjct: 544 WGALLAG 550



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 254/561 (45%), Gaps = 33/561 (5%)

Query: 43  QKSHFSSSSSSSQWFSILRHAI-----STSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           Q +  +++SS+ + FS   H +     +   +   +  H + +      +  L N +MT 
Sbjct: 21  QMTTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTF 80

Query: 98  --YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
                 G   YARRLFD++P+ +L  WN+++  Y+       +    G  L+  +     
Sbjct: 81  CCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR-----LDFPQLGVSLYLEMLRRGV 135

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
              R T   L K       +     +HG+ LK GL ++ FV  ALV +Y   G++  A+ 
Sbjct: 136 KPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARG 195

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           +FD   + DV+ W +++ AY + G  EE   LF+ +    + P   ++  VL   S L  
Sbjct: 196 VFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKD 255

Query: 276 -RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
            R  ++V +Y     +    SN+VL N  +  Y   G+   A+  F    RS    D ++
Sbjct: 256 LRTGKKVHSYVKNCKV---ESNLVLENAMIDMYADCGEMDSALGIF----RSMNNRDIIS 308

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGF--YSAVIVG-------NSLINMYSKMGCVCG 385
           +   ++       +++ +       +  +  ++A+I G          + ++  M     
Sbjct: 309 WTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQAT-N 367

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           ++ D+FT+ SVL A + L   L L + I  +  +N    D FV  ALID+Y + G + +A
Sbjct: 368 VKPDEFTMVSVLTACAHL-GALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKA 426

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
           E +F      D  TW AMI G  ++ +  KAL++FS+M  +    DEIT    + AC   
Sbjct: 427 ESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHT 486

Query: 506 LMLKQGKQMH-AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
            ++ +G++       + G E ++     ++D+  + G + +A  +  ++P   + + W  
Sbjct: 487 GLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGA 546

Query: 564 MISGCVDNGEEDLALSIYHQM 584
           +++GC    E D+A  +  Q+
Sbjct: 547 LLAGCRVYRESDMAEMVVKQI 567



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 173/385 (44%), Gaps = 34/385 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN--GSMAEAEYLFENKDGFDLATWNA 462
           E +   +Q+H  AIK    A+  +   ++   C +  G    A  LF+     +L  WN 
Sbjct: 50  ESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNT 109

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY   +     + L+  M   G + D  T     K     + L+ G+Q+H + +K G
Sbjct: 110 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 169

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            + ++ V + ++ MY+ CG +  A+ +F+  P  D + W  +IS     G+ + +  ++ 
Sbjct: 170 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFL 229

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            M    V+P   T  +++ A S L  L  G+++H+ +      S+  +  +++DMYA CG
Sbjct: 230 VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCG 289

Query: 643 NIEDAYILFKQMDMRNT-------------------------------VLWNAMLVGLAQ 671
            ++ A  +F+ M+ R+                                V W AM+ G  +
Sbjct: 290 EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIR 349

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
               +E L+LF +M+A  V+PD  T + VL+AC++ G + E  E      ++  I+ ++ 
Sbjct: 350 SNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL-ELGEWIRTYIDRNKIKNDLF 408

Query: 732 HYSFLVDALGRAGRTKEAGELILSM 756
             + L+D   + G   +A  +   M
Sbjct: 409 VRNALIDMYFKCGDVDKAESIFREM 433



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 21/227 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LG+     I  +    D F+ N L+ MY +CG +  A  +F +M  R
Sbjct: 377 SVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR 436

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D  +W +++   A +G G      +   +F ++ ++      +T   +L  C  +G V  
Sbjct: 437 DKFTWTAMIVGLAVNGHGE-----KALDMFSNMLKASILPDEITYIGVLSACTHTGLV-- 489

Query: 178 SETVHGYALKI----GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            +    Y L++    G+  +    G LV++ ++ G+++EA  + + M  + + ++W  +L
Sbjct: 490 -DKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 548

Query: 233 ---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
              R Y E+   E V    ++L      PD+ +V  +L  I    KR
Sbjct: 549 AGCRVYRESDMAEMVVKQILELE-----PDNGAVYVLLCNIYAACKR 590


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 220/682 (32%), Positives = 340/682 (49%), Gaps = 76/682 (11%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +        +++WN    G+    D   A++ +V M+   +  +S TF   L + A
Sbjct: 55  YAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCA 114

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQ+HG  LK GF   + +  SLI+MY + G                      
Sbjct: 115 KSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNG---------------------- 152

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  ++++   +   D V+     TALI  Y   G +  A  +F+     D+ +WNA 
Sbjct: 153 --RLEDAQKVXDKSSHRDVVS----YTALITGYASRGXIESAHKMFDEIPVKDVVSWNAX 206

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  + N  +ALELF  M  +  R DE T+ T + AC     ++ G+Q+H++    GF
Sbjct: 207 ISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGF 266

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y KCG +  A  +F  +   D ++W T+I G         AL ++  
Sbjct: 267 GXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQD 326

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAKC 641
           M  SG  P++ T   ++ A + L A++ GR IH  + K     ++   +  SL+DMYAKC
Sbjct: 327 MLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 386

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G+IE A  +F  M  R+   WNAM+ G A HG       +F  M+ +G+EPD +TF+G+L
Sbjct: 387 GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 446

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS++G++      F  M   Y + P++EHY  ++D  G +G  KEA ++I +M  E  
Sbjct: 447 SACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPD 506

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             +  +LL AC++ G+ E G+  A+ L+ +EP +  +YVLLSNI+A A +W++V   R  
Sbjct: 507 GVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRAL 566

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           +  K +KK P                          I+  +E +   ++E G+VPDT  V
Sbjct: 567 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------KE 898
           L ++EEE KE AL +HSEKLA A+GLIST P +   I+ N                  K 
Sbjct: 627 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 686

Query: 899 PLYA---NRFHHLRDGMCPCAD 917
            + A    RFHH RDG C C D
Sbjct: 687 EIIARDRTRFHHFRDGECSCND 708



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 228/528 (43%), Gaps = 104/528 (19%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +FD + +  L+ WN++   +A S +          +L+  +       +  T  
Sbjct: 53  LPYAISVFDTIQEPXLLIWNTMFRGHALSSDP-----VSALKLYVCMVSLGLLPNSYTFP 107

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S      + +HG  LK G   D ++  +L+++Y + G++ +A+ + D    R
Sbjct: 108 FLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHR 167

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV +  ++  YA  G  E    +F          D+  V+                   
Sbjct: 168 DVVSYTALITGYASRGXIESAHKMF----------DEIPVK------------------- 198

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       +VV WN  +SGY + G+   A+E F  M+++NV+ D  T +  L+A A
Sbjct: 199 ------------DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACA 246

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---CVCGL-------------- 386
            + ++ LG+Q+H      GF   + + N+LI++YSK G     CGL              
Sbjct: 247 QSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNT 306

Query: 387 --------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVH---A 417
                                     + +  T+ S+L A + L   + + + IHV+    
Sbjct: 307 LIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLG-AIDIGRWIHVYIDKR 365

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +K  T A S + T+LID+Y + G +  A+ +F++     L++WNAMIFG+ +   ++ A 
Sbjct: 366 LKGVTNASS-LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSG 532
           ++FS M  +G   D+IT    + AC    ML  G+ +       Y +    E   C    
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGC---- 480

Query: 533 ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
           ++D+    G   +A+ + N +   PD V W +++  C  +G  +L  S
Sbjct: 481 MIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGES 528



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 234/532 (43%), Gaps = 30/532 (5%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN---IYSKFGKIREAKFLFDGM 220
           P L L      + +   +H   +K GL    +    L+    +   F  +  A  +FD +
Sbjct: 4   PSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGK 275
           QE  +++W  M R +A +        L+V +   GL P+  +       C        G+
Sbjct: 64  QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLW--NKKLSGYLQVGD--NHGAIECFVNMIRSNVQYD 331
           +   QV  +   L LY + S + ++  N +L    +V D  +H  +  +  +I       
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN--SLINMYSKMGCVCGLRTD 389
            +      +A    D + +   +      SG+      GN    + ++ KM     +R D
Sbjct: 184 XIE-----SAHKMFDEIPVKDVVSWNAXISGYAE---TGNYKEALELFKKM-MKTNVRPD 234

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           + T+ +VL A +     + L +Q+H     +    +  +  ALID+Y + G +  A  LF
Sbjct: 235 ESTMVTVLSACAQ-SGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLF 293

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +     D+ +WN +I GY   N   +AL LF  M  SGE+ +++T+ + + AC  L  + 
Sbjct: 294 QGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAID 353

Query: 510 QGKQMHAYAMK--SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            G+ +H Y  K   G      + + ++DMY KCG +  AQ +F+ +      +W  MI G
Sbjct: 354 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFG 413

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G  + A  I+ +MR +G+ PD+ TF  L+ A S    L+ GR I  ++ + D    
Sbjct: 414 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR-DYKLM 472

Query: 628 PFVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           P +     ++D+    G  ++A  +   M+M  + V+W ++L     HGN E
Sbjct: 473 PKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVE 524



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 137/292 (46%), Gaps = 36/292 (12%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+T Y+  G +  A ++FD++P +D++SWN+ ++ YA +G     N  E   LF+ + ++
Sbjct: 175 LITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETG-----NYKEALELFKKMMKT 229

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                  T+  +L  C  SG +     VH +    G   +  +  AL+++YSK G++  A
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETA 289

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             LF G+  +DV+ W  ++  Y      +E   LF D+ RSG  P+D ++  +L   + L
Sbjct: 290 CGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHL 349

Query: 274 G-------------KRHEEQVQAYAIKLLLYNN------------------NSNVVLWNK 302
           G             KR +    A +++  L +                   N ++  WN 
Sbjct: 350 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNA 409

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            + G+   G  + A + F  M ++ ++ D +TF+  L+A + +  L+LG+ I
Sbjct: 410 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 47/282 (16%)

Query: 508 LKQGKQMHAYAMKSGFE---------LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           L+  + +HA  +K+G           L+ CV S   D       +  A S+F+ I  P  
Sbjct: 15  LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFD------GLPYAISVFDTIQEPXL 68

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           + W TM  G   + +   AL +Y  M   G++P+ +TF  L+K+ +   A ++G+Q+H  
Sbjct: 69  LIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQ 128

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIED-------------------------------A 647
           ++K     D ++  SL+ MY + G +ED                               A
Sbjct: 129 VLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESA 188

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
           + +F ++ +++ V WNA + G A+ GN +E L+LF+ M    V PD  T + VLSAC+ +
Sbjct: 189 HKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQS 248

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           G + E     H     +G    ++  + L+D   + G  + A
Sbjct: 249 GSI-ELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETA 289



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 12/229 (5%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S   ++L     +  + LG+  H+ I +     +  + N L+ +YS+CG L  A  LF  
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           + ++D+ISWN+++  Y H          E   LF+ +  S    + +T+  +L  C   G
Sbjct: 296 LSNKDVISWNTLIGGYTH-----MNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLG 350

Query: 174 YVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            +     +H Y  K   G+     +  +L+++Y+K G I  A+ +FD M  R +  W  M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
           +  +A +G     F +F  + ++G+ PDD +   +L   S     DLG+
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 459


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 256/934 (27%), Positives = 427/934 (45%), Gaps = 143/934 (15%)

Query: 114 MPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-- 169
           MPD  R   SW + ++     G       +  F + R +RE     S   LA L+  C  
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRD-----STAFSMLRGMRERGVPLSGFALASLVTACER 55

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
              G       +H    K GL+ + ++  AL+++Y     + +A+ LF  M ER+VV W 
Sbjct: 56  WEEGRA-CGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWT 114

Query: 230 VMLRAYAENGFGEEVFHLFVDLHR-----------------------------------S 254
            ++ A + NG  EE    +  + R                                   S
Sbjct: 115 ALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVS 174

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
           GL         ++ ++ +LG+ H+ +      KL       + V WN  +S Y   G   
Sbjct: 175 GLQRQVSVANSLISMLGNLGRVHDAE------KLFYRMEERDTVSWNALVSMYSHEGLCS 228

Query: 315 GAIECFVNMIRSNV-QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            +   F +M R  + ++D+ T    ++  A +D ++ G  +H   L++G +S + V N+L
Sbjct: 229 KSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNAL 288

Query: 374 INMYSKMGCVC--------------------------------GLRT-----------DQ 390
           +NMYS  G +                                  L+T           D+
Sbjct: 289 VNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDR 348

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T +S L A SS P  L   + +H   ++     +  V  +LI +Y +  S+ +AE +F+
Sbjct: 349 MTFSSALGACSS-PGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQ 407

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D+ + N +I  Y +  +  KA+++F  M     +L+ ITI   + +      L+ 
Sbjct: 408 LMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRN 467

Query: 511 -GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G  +HAY + +GF  D  VS+ ++ MY KCG +  + ++F  I     V+W  MI+  V
Sbjct: 468 YGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANV 527

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            +G  + +L ++  MR  G   D    A  + +S+ L +LE+G Q+H   +K    +D  
Sbjct: 528 QHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSH 587

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           V  + +DMY KCG +++   +     +R    WN ++ G A++G  +E  + F+ M + G
Sbjct: 588 VVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVG 647

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             PD VTF+ +LSACS+ GLV +  + ++ M   +G+ P ++H   +VD LGR GR  EA
Sbjct: 648 RTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEA 707

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            + I  MP   +  + R+LL + R   + + G+  A++L+ L+PFD SAYVLLSN++A +
Sbjct: 708 EKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATS 767

Query: 810 NQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRI 846
            +W DV   R  MK  N+ K P                       AD I+ K++ ++ ++
Sbjct: 768 ARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKL 827

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           +E GYV DT   L D +EE+KE+ L+ HSEKLA AYGLI+ P    +             
Sbjct: 828 REVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCH 887

Query: 894 --------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                   + ++E +  +  RFHH + G C C+D
Sbjct: 888 LVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSD 921



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 157/679 (23%), Positives = 293/679 (43%), Gaps = 82/679 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G + HA    +  + + ++   L+ +Y     ++ A+RLF +MP+R+++SW +++ A + 
Sbjct: 63  GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G     ++ E    +R +R      +    A ++ LC S     A   V  + +  GL 
Sbjct: 123 NG-----HLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQ 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V+ +L+++    G++ +A+ LF  M+ERD V W  ++  Y+  G   + F +F D+
Sbjct: 178 RQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDM 237

Query: 252 HRSGLCPDDESVQCVL-----------------------------GVISDLGKRHEEQVQ 282
            R GL   D +  C L                              V++ L   +    +
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGK 297

Query: 283 AYAIKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
               + L +N +  +++ WN  +S Y+Q G+N  A++    ++ +N   D +TF  AL A
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-----------------C 384
            +    L  G+ +H  TL+   +  ++VGNSLI MY K   +                 C
Sbjct: 358 CSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSC 417

Query: 385 GL--------------------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
            +                          + +  T+ ++L + +S  +  +    +H + I
Sbjct: 418 NILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTI 477

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
               ++D +VS +LI +Y + G +  +  +F+      + +WNAMI   +   +  ++L+
Sbjct: 478 HAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLK 537

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M   G  LD I +A  + +   L  L++G Q+H   +K G   D  V +  +DMY 
Sbjct: 538 LFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYG 597

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG M +   +  D        W T+ISG    G    A   +  M   G  PD  TF  
Sbjct: 598 KCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVT 657

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD- 655
           L+ A S    +++G   + ++  +   S P +   + +VD+  + G   +A    + M  
Sbjct: 658 LLSACSHAGLVDKGIDYYNSMSSVFGVS-PGIKHCVCIVDILGRLGRFAEAEKFIEDMPV 716

Query: 656 MRNTVLWNAMLVGLAQHGN 674
           + N ++W ++L     H N
Sbjct: 717 LPNDLIWRSLLSSSRTHKN 735



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 37/310 (11%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S   L+ G+  HA  L  S   +  + N+L+TMY +C S+  A R+F  MP+ D++S N 
Sbjct: 360 SPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNI 419

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA-SETVHG 183
           ++ +YA   +G     T+  ++F  +R      + +T+  +L    SS  +      +H 
Sbjct: 420 LIGSYAVLEDG-----TKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHA 474

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           Y +  G + D++VS +L+ +Y+K G +  +  +F  +  R VV W  M+ A  ++G GEE
Sbjct: 475 YTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEE 534

Query: 244 VFHLFVDLHRSGLCPDDESV-QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV---- 298
              LF+D+   G   D   + +C+    S        Q+    +K  L  N+S+VV    
Sbjct: 535 SLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGL-GNDSHVVNAAM 593

Query: 299 -------------------------LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                     WN  +SGY + G    A E F +MI      D V
Sbjct: 594 DMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYV 653

Query: 334 TFLVALAAVA 343
           TF+  L+A +
Sbjct: 654 TFVTLLSACS 663



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 6/218 (2%)

Query: 58  SILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +IL    S++DL   G   HA  +++  + D +++N+L+TMY++CG L  +  +F ++ +
Sbjct: 454 NILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIIN 513

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R ++SWN+++AA    G G      E  +LF  +R        + LA  +    S   + 
Sbjct: 514 RSVVSWNAMIAANVQHGHGE-----ESLKLFMDMRHDGNGLDHICLAECMSSSASLASLE 568

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +HG  LK GL  D  V  A +++Y K GK+ E   +      R    W  ++  YA
Sbjct: 569 EGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYA 628

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             G+ +E    F  +   G  PD  +   +L   S  G
Sbjct: 629 RYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAG 666


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 214/658 (32%), Positives = 336/658 (51%), Gaps = 32/658 (4%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGK--IREAKFLFDGMQE--RDVVLWKVMLRA 234
           E +H +ALK G      V+ +L+N YS   +  +  A  +FD +    RDV  W  +L  
Sbjct: 32  EALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLNP 91

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
            + +   + +      L  S + P   S        +           A+A+   + +  
Sbjct: 92  LSRHRPLDALSRFRSMLSSSTVLPSPHSFA-AAFTAAARAASAPAGTAAHALACKIPSAV 150

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           SNV +    L+ Y ++G    A   F  M + N                           
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRN-------------------------SF 185

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
             +T+ +G Y+A        +++  M   C     +F   +VL A S +P GL + +Q+H
Sbjct: 186 SWSTMVAG-YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVS-VPLGLLMGEQMH 243

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K+  +    V  +L+ +Y + G M  A ++FE+    +  TW+AMI GY  +  + 
Sbjct: 244 GLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEAD 303

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            A+ +FS MH +G    E T    + A   L  L  GKQ H   +K GFE+ + V S ++
Sbjct: 304 SAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALV 363

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY KCG + DA+  F+ +   D V WT M+SG V NGE + AL++Y +M   G++P + 
Sbjct: 364 DMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKS 423

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T A  ++A + + ALE G+Q+H  ++K        VG +L  MY+KCGN+ED   +F+++
Sbjct: 424 TIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRI 483

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             R+ + WN+++ G +Q+G G   L LFE+MK  G  PD++TFI +L ACS+ GLV   +
Sbjct: 484 PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGW 543

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
           E F LM + YG+ P ++HY+ +VD L RAG  KEA + I S+  +    + R +LGACR 
Sbjct: 544 EYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRS 603

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             D + G +  E+LM L   DSSAY+LLSNI+A+  +W+DV   R  M+ + V KDP 
Sbjct: 604 LRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPG 661



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 239/600 (39%), Gaps = 94/600 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS--LVYARR 109
           S +Q+  +LR   S      G++ HA  L S       + N+L+  YS      L  A  
Sbjct: 13  SHTQFIELLRRRASCPRH--GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFA 70

Query: 110 LFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLL 166
           +FD +P   RD+ SWNS+L   +           +    FRS L  S    S  + A   
Sbjct: 71  VFDDIPPAARDVASWNSLLNPLSR------HRPLDALSRFRSMLSSSTVLPSPHSFAAAF 124

Query: 167 KLCLSSGYVWASETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
                +    A    H  A KI   V + +V  +L+N+Y K G + +A+ +FDGM +R+ 
Sbjct: 125 TAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNS 184

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES---VQCVLGVIS-DLGKRHEEQV 281
             W  M+  YA     EE F LF  +     CP ++S      VL  +S  LG    EQ+
Sbjct: 185 FSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQM 242

Query: 282 QAYAIK-------------LLLY---------------NNNSNVVLWNKKLSGYLQVGDN 313
               +K             + +Y               +   N + W+  ++GY Q G+ 
Sbjct: 243 HGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEA 302

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M  +       TF+  L A +    L +G+Q HG  +K GF   + V ++L
Sbjct: 303 DSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSAL 362

Query: 374 INMYSKMGCVC-------------------------------------------GLRTDQ 390
           ++MY+K GC+                                            G+   +
Sbjct: 363 VDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSK 422

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T+AS LRA + +   L   KQ+H   +K      + V +AL  +Y + G++ +   +F 
Sbjct: 423 STIASGLRACAGI-AALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 481

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D+  WN++I G+  +   + AL+LF  M   G   D IT    + AC  + ++ +
Sbjct: 482 RIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDR 541

Query: 511 GKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
           G +  +   K  G    L   + ++D+  + G + +A+     I        W  ++  C
Sbjct: 542 GWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGAC 601



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 7/183 (3%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMY--VKCGAMVDAQSIFNDIP--APDDVAWTTM 564
           + G+ +HA+A+KSG      V++ +++ Y  +    +  A ++F+DIP  A D  +W ++
Sbjct: 29  RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88

Query: 565 ISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           ++    +   D ALS +  M   S V+P   +FA    A++   +   G   HA   K+ 
Sbjct: 89  LNPLSRHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147

Query: 624 CS-SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
            + S+ +V  SL++MY K G + DA  +F  M  RN+  W+ M+ G A     EE   LF
Sbjct: 148 SAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF 207

Query: 683 EDM 685
             M
Sbjct: 208 RLM 210


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 202/612 (33%), Positives = 323/612 (52%), Gaps = 64/612 (10%)

Query: 364 YSAVIVGNSLIN-------MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           ++A+I G S  N       MYS M  +  +  D FT   +L+A S L   L + + +H  
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQ-LARVSPDSFTFPHLLKACSGLSH-LQMGRFVHAQ 144

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL-----ATWNAMIFGYILSN 471
             +    AD FV   LI +Y +   +  A  +FE   G  L      +W A++  Y  + 
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE---GLPLPERTIVSWTAIVSAYAQNG 201

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +ALE+FSHM     + D + + + + A  CL  LKQG+ +HA  +K G E++  +  
Sbjct: 202 EPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +  MY KCG +  A+ +F+ + +P+ + W  MISG   NG    A+ ++H+M    V P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D  +    + A + + +LEQ R ++  + + D   D F+  +L+DM+AKCG++E A ++F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +   R+ V+W+AM+VG   HG   E + L+  M+  GV P+ VTF+G+L AC+++G+V 
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E +  F+LM + + I P+ +HY+ ++D LGRAG   +A E+I  MP +   ++  ALL A
Sbjct: 442 EGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           C+     E G++ A++L +++P ++  YV LSN++AAA  WD V   R  MK K + KD 
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                   + I  +VE +  R+KEGG+V + D  L D+ +EE E
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
             L  HSE++A AYGLISTP  + +                     L ++E +    NRF
Sbjct: 621 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 680

Query: 906 HHLRDGMCPCAD 917
           HH +DG+C C D
Sbjct: 681 HHFKDGVCSCGD 692



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 181/342 (52%), Gaps = 5/342 (1%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQIH   +        F+ T LI      G +  A  +F++     +  WNA+I GY  +
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           N+   AL ++S+M  +    D  T    +KAC  L  L+ G+ +HA   + GF+ D+ V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           +G++ +Y KC  +  A+++F  +P P+   V+WT ++S    NGE   AL I+  MR   
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V PD      ++ A +CL  L+QGR IHA+++K+    +P + ISL  MYAKCG +  A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           ILF +M   N +LWNAM+ G A++G   E + +F +M    V PD+++    +SAC+  G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 709 LVSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            + +A   + ++ R  Y    +V   S L+D   + G  + A
Sbjct: 338 SLEQARSMYEYVGRSDY--RDDVFISSALIDMFAKCGSVEGA 377



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 36/346 (10%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HAR+L        FL   L+   S  G + +AR++FD +P   +  WN+I+  Y+ +
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
                 +  +   ++ +++ +       T   LLK C    ++     VH    ++G   
Sbjct: 98  -----NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           D FV   L+ +Y+K  ++  A+ +F+G+   ER +V W  ++ AYA+NG   E   +F  
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSH 212

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-------LLYNNNS------- 295
           + +  + PD  ++  VL   + L   +    + A  +K+       LL + N+       
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272

Query: 296 --------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         N++LWN  +SGY + G    AI+ F  MI  +V+ D+++   A++A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
            A   +L   + ++    +S +   V + ++LI+M++K G V G R
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 2/196 (1%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           Q KQ+HA  +  G +    + + ++      G +  A+ +F+D+P P    W  +I G  
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N     AL +Y  M+L+ V PD FTF  L+KA S L+ L+ GR +HA + +L   +D F
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           V   L+ +YAKC  +  A  +F+ + +  R  V W A++   AQ+G   E L++F  M+ 
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK 215

Query: 688 HGVEPDSVTFIGVLSA 703
             V+PD V  + VL+A
Sbjct: 216 MDVKPDWVALVSVLNA 231



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 36/314 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD--KMPD 116
           +L+     S L +G+  HA++       D F+ N L+ +Y++C  L  AR +F+   +P+
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R ++SW +I++AYA +GE       E   +F  +R+       + L  +L        + 
Sbjct: 185 RTIVSWTAIVSAYAQNGEP-----MEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLK 239

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
              ++H   +K+GL  +  +  +L  +Y+K G++  AK LFD M+  +++LW  M+  YA
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----------------RHEEQ 280
           +NG+  E   +F ++    + PD  S+   +   + +G                 R +  
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359

Query: 281 VQAYAIKL-----------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           + +  I +           L+++   + +VV+W+  + GY   G    AI  +  M R  
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419

Query: 328 VQYDSVTFLVALAA 341
           V  + VTFL  L A
Sbjct: 420 VHPNDVTFLGLLMA 433



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 8/219 (3%)

Query: 45  SHFSSSSSSSQWF---SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           SH         W    S+L       DL  G+S HA ++      +  L  +L TMY++C
Sbjct: 211 SHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G +  A+ LFDKM   +LI WN++++ YA +G        E   +F  +         ++
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR-----EAIDMFHEMINKDVRPDTIS 325

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +   +  C   G +  + +++ Y  +     D F+S AL+++++K G +  A+ +FD   
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           +RDVV+W  M+  Y  +G   E   L+  + R G+ P+D
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 195/559 (34%), Positives = 303/559 (54%), Gaps = 47/559 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + L  +++IH H   +    D+F+  +LI +YC+  S+ +A  +F+     D+ +W ++I
Sbjct: 65  KNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLI 124

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  ++   +A+ L   M     + +  T A+ +KA G       G+Q+HA A+K G+ 
Sbjct: 125 AGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWH 184

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D+ V S +LDMY +CG M  A ++F+ + + + V+W  +ISG    G+ + AL  + +M
Sbjct: 185 EDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEM 244

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
             +G     FT++ +  + + L ALEQG+ +HA++IK       FVG +L+DMYAK G++
Sbjct: 245 LRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSM 304

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            DA  +F ++D ++ V WN+ML   AQ+G G+E +  FE+M+  GV  + +TF+ +L+AC
Sbjct: 305 IDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTAC 364

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV E    F +M+E Y +EPE++HY  +V  LGRAG    A   I  MP E +A++
Sbjct: 365 SHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAV 423

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             ALL ACR+  + + G++ A+ +  L+P DS   VLL NI+A+  QWD     R  MK 
Sbjct: 424 WGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKT 483

Query: 825 KNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
             VKK+P                       A+ I+     + K+I++ GYVPD D+VLL 
Sbjct: 484 TGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLH 543

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-------------------- 901
           V+++EKE  L YHSEKLA A+ LI  P  + I   K                        
Sbjct: 544 VDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIV 603

Query: 902 ---ANRFHHLRDGMCPCAD 917
               NRFHH   G C C D
Sbjct: 604 VRDTNRFHHFSSGSCSCGD 622



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 127/226 (56%), Gaps = 1/226 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L+  +++HA+   S F  D  + + ++ MY KC +++DA+++F+ +   D 
Sbjct: 58  ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDM 117

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WT++I+G   N     A+ +   M      P+ FTFA L+KA+        GRQIHA 
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHAL 177

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K     D +VG +L+DMYA+CG ++ A  +F ++D +N V WNA++ G A+ G+GE  
Sbjct: 178 AVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESA 237

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREK 723
           L  F +M  +G E    T+  V S+ +  G + +  + + H+++ +
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSR 283



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 45/334 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S +     + +L   +  HA + +S    D FL N+L+ MY +C S++ AR +FD+M  +
Sbjct: 56  SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW S++A YA +     +   E   L   + +     +  T A LLK   +      
Sbjct: 116 DMVSWTSLIAGYAQN-----DMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGT 170

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H  A+K G   D +V  AL+++Y++ GK+  A  +FD +  ++ V W  ++  +A 
Sbjct: 171 GRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK--------- 287
            G GE     F ++ R+G      +   V   I+ LG   + + V A+ IK         
Sbjct: 231 KGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFV 290

Query: 288 ----LLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               L +Y                +N ++V WN  L+ + Q G    A+  F  M +S V
Sbjct: 291 GNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGV 350

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
             + +TFL  L A +           HG  +K G
Sbjct: 351 YLNQITFLCILTACS-----------HGGLVKEG 373



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 140/263 (53%), Gaps = 12/263 (4%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           ++P  ++ LLP + K  F  +  +  + S+L+ A + +D   G+  HA  +      D +
Sbjct: 131 DMPVEAIGLLPGMLKGRFKPNGFT--FASLLKAAGAYADSGTGRQIHALAVKCGWHEDVY 188

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ MY+RCG +  A  +FDK+  ++ +SWN++++ +A  G+G +  +T    + R+
Sbjct: 189 VGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFA-EMLRN 247

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             E+  FT     + + +L    G +   + VH + +K       FV   L+++Y+K G 
Sbjct: 248 GFEATHFTYSSVFSSIARL----GALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGS 303

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-- 267
           + +A+ +FD +  +D+V W  ML A+A+ G G+E    F ++ +SG+  +  +  C+L  
Sbjct: 304 MIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTA 363

Query: 268 ---GVISDLGKRHEEQVQAYAIK 287
              G +   GKR+ E ++ Y ++
Sbjct: 364 CSHGGLVKEGKRYFEMMKEYDLE 386



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 137/333 (41%), Gaps = 44/333 (13%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            +  C  S  +  +  +H +        D F+  +L+++Y K   + +A+ +FD M+ +D
Sbjct: 57  FITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKD 116

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQV 281
           +V W  ++  YA+N    E   L   + +    P+  +   +L   G  +D G     Q+
Sbjct: 117 MVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGT--GRQI 174

Query: 282 QAYAIK-------------LLLYN---------------NNSNVVLWNKKLSGYLQVGDN 313
            A A+K             L +Y                ++ N V WN  +SG+ + GD 
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M+R+  +    T+    +++A    L  G+ +H   +KS       VGN+L
Sbjct: 235 ESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTL 294

Query: 374 INMYSKMGCVCGLR--------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           ++MY+K G +   R         D  T  S+L A +    GL      H   ++   V  
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQY--GLGKEAVSHFEEMRKSGVYL 352

Query: 426 SFVSTALIDVYCRNGSMA-EAEYLFENKDGFDL 457
           + ++   I   C +G +  E +  FE    +DL
Sbjct: 353 NQITFLCILTACSHGGLVKEGKRYFEMMKEYDL 385



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 31/259 (11%)

Query: 19  IFSSFTK--DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           + S F +  D    L +F+  L    + +HF+ SS  S   SI R       L  GK  H
Sbjct: 224 LISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFS---SIAR----LGALEQGKWVH 276

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           A ++ S Q    F+ N L+ MY++ GS++ AR++FD++ ++DL++WNS+L A+A  G G 
Sbjct: 277 AHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGK 336

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS----ETVHGYALKIGLVW 192
                E    F  +R+S  + +++T   +L  C   G V       E +  Y L+  +  
Sbjct: 337 -----EAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEI-- 389

Query: 193 DEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML---RAYAENGFGEEVFHLF 248
           D +V+  +V +  + G +  A  F+F    E    +W  +L   R +     G+     F
Sbjct: 390 DHYVT--VVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQ-----F 442

Query: 249 VDLHRSGLCPDDESVQCVL 267
              H   L PDD     +L
Sbjct: 443 AADHVFELDPDDSGPPVLL 461



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 4/194 (2%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P    +   + A +    LE  R+IHA+L     + D F+  SL+ MY KC ++ DA 
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SYT 707
            +F QM  ++ V W +++ G AQ+    E + L   M     +P+  TF  +L A  +Y 
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
              S      H +  K G   +V   S L+D   R G+   A  +   +  +   S +  
Sbjct: 167 D--SGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNAL 224

Query: 768 LLGACRVQGDTETG 781
           + G  R +GD E+ 
Sbjct: 225 ISGFAR-KGDGESA 237


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 218/717 (30%), Positives = 350/717 (48%), Gaps = 99/717 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N V W   ++ + + G    A+  +  M+   ++ D   F+VA+   + + +L  GQ +H
Sbjct: 22  NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLH 81

Query: 356 GTTLKSGFYS-AVIVGNSLINMYSK-------------MGCVC----------------- 384
              L++      +I+G +LI MY++             MG                    
Sbjct: 82  AMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141

Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           G++ D  T +S L A S + + +   ++I    + +   +DS V
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD-ISQGREIEARTVASGYASDSIV 200

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             ALI++Y + GS+  A  +F+     D+  WN MI GY     + +ALELF  M  +  
Sbjct: 201 QNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP 260

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA-MVDAQ 547
           + + +T    + AC  L  L+QG+ +H    + G+E DL + + +L+MY KC + + +A+
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEAR 320

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F  +   D + W  +I   V  G+   AL I+ QM+L  V P+E T + ++ A + L 
Sbjct: 321 QVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A  QG+ +HA +    C +D  +  SL++MY +CG+++D   +F  +  ++ V W+ ++ 
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             AQHG+    L+ F ++   G+  D VT +  LSACS+ G++ E  ++F  M   +G+ 
Sbjct: 441 AYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLA 500

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P+  H+  +VD L RAGR + A  LI  MPF   A    +LL  C++  DT+    VA+K
Sbjct: 501 PDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADK 560

Query: 788 LMALEPFDS-SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------- 832
           L  LE  D  S   LLSN++A A +WDDV   R    R+  +K+P               
Sbjct: 561 LFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFV 617

Query: 833 ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                    +LI A+++ L K++K+ GYVPD   VL +V+EEEKE+ L YHSEKLA AYG
Sbjct: 618 AGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYG 677

Query: 884 LISTPPS----------------------SVILSNKEPLY-ANRFHHLRDGMCPCAD 917
           LISTPP                       S I+  K  +  + RFHH  +G C C D
Sbjct: 678 LISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKD 734



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 147/636 (23%), Positives = 266/636 (41%), Gaps = 122/636 (19%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CGS+  A  +F  +   + +SW  I+AA+A +G                 RE++ +
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGH---------------YREALGY 45

Query: 157 TSRLTLAPL----------LKLCLSSGYVWASETVHGYALKIGLV-WDEFVSGALVNIYS 205
             R+ L  L          + +C SS  +   + +H   L+  L+ +D  +  AL+ +Y+
Sbjct: 46  YRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYA 105

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL---HRSGLCPDDES 262
           +   +  A+  FD M ++ +V W  ++  Y+ NG       ++ D+      G+ PD  +
Sbjct: 106 RCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAIT 165

Query: 263 VQCVL---GVISDLGKRHEEQVQ----AYAIKLLLYN----------------------N 293
               L    V+ D+ +  E + +     YA   ++ N                       
Sbjct: 166 FSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N +V+ WN  +SGY + G    A+E F  M  ++ + + VTF+  L A    ++L  G+ 
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           IH    + G+ S +++GN L+NMY+K                    SSSL E        
Sbjct: 286 IHRKVKEHGYESDLVIGNVLLNMYTK-------------------CSSSLEE-------- 318

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                                          A  +FE     D+ TWN +I  Y+    +
Sbjct: 319 -------------------------------ARQVFERLRTRDVITWNILIVAYVQYGQA 347

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             AL++F  M       +EIT++  + AC  L   +QGK +HA       + D+ + + +
Sbjct: 348 KDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSL 407

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           ++MY +CG++ D   +F  I     V+W+T+I+    +G     L  + ++   G+  D+
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467

Query: 594 FTFAILVKASSCLTALEQGRQIHANLI-KLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            T    + A S    L++G Q   +++     + D    + +VD+ ++ G +E A  L  
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527

Query: 653 QMD-MRNTVLWNAMLVGLAQHGNGEETL----KLFE 683
            M  + + V W ++L G   H + +       KLFE
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 185/393 (47%), Gaps = 48/393 (12%)

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+A+A  +F   +  +  +W  ++  +  + +  +AL  +  M   G R D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
              A+  C     LKQG+ +HA  +++   E D+ + + ++ MY +C  +  A+  F+++
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQM---RLSGVVPDEFTFAILVKASSCLTALE 610
                V W  +I+G   NG+   AL IY  M      G+ PD  TF+  + A S +  + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QGR+I A  +    +SD  V  +L++MY+KCG++E A  +F ++  R+ + WN M+ G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS------------------------- 705
           + G   + L+LF+ M  +  +P+ VTFIG+L+AC+                         
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 706 --------YTGLVS---EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
                   YT   S   EA + F  +R +     +V  ++ L+ A  + G+ K+A ++  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTR-----DVITWNILIVAYVQYGQAKDALDIFK 355

Query: 755 SMPFEASASMHRAL---LGACRVQGDTETGKWV 784
            M  E  A     L   L AC V G    GK V
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 230/554 (41%), Gaps = 128/554 (23%)

Query: 65  STSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           S+ DL  G+  HA IL +  +  D  L   L+TMY+RC  L  AR+ FD+M  + L++WN
Sbjct: 70  SSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSL---------RESITFTSRLTLAPLLKLCLSSGY 174
           +++A Y+ +G+          ++++ +          ++ITF+S L        C   G 
Sbjct: 130 ALIAGYSRNGDHRG-----ALKIYQDMVSKSPEGMKPDAITFSSALYA------CSVVGD 178

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +     +    +  G   D  V  AL+N+YSK G +  A+ +FD ++ RDV+ W  M+  
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--------DLGKRHEEQVQ--AY 284
           YA+ G   +   LF    R G      +V   +G+++        + G+    +V+   Y
Sbjct: 239 YAKQGAATQALELF---QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGY 295

Query: 285 AIKLLLYN-----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
              L++ N                          +V+ WN  +  Y+Q G    A++ F 
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFK 355

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M   NV  + +T    L+A A       G+ +H         + V++ NSL+NMY++  
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNR-- 413

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNG 440
             CG   D   + + +R                           S VS + LI  Y ++G
Sbjct: 414 --CGSLDDTVGVFAAIRDK-------------------------SLVSWSTLIAAYAQHG 446

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
                                          +S   LE F  +   G   D++T+ + + 
Sbjct: 447 -------------------------------HSRTGLEHFWELLQEGLAADDVTMVSTLS 475

Query: 501 ACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP- 554
           AC    MLK+G Q     +  + +   +   LC    ++D+  + G +  A+++ +D+P 
Sbjct: 476 ACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLC----MVDLLSRAGRLEAAENLIHDMPF 531

Query: 555 APDDVAWTTMISGC 568
            PD VAWT+++SGC
Sbjct: 532 LPDAVAWTSLLSGC 545



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 182/407 (44%), Gaps = 59/407 (14%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+  G+   AR + S    D  + N L+ MYS+CGSL  AR++FD++ +RD+I+WN++++
Sbjct: 178 DISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMIS 237

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            YA  G       T+   LF+ +  +    + +T   LL  C +   +     +H    +
Sbjct: 238 GYAKQGAA-----TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKE 292

Query: 188 IGLVWDEFVSGALVNIYSKF-GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            G   D  +   L+N+Y+K    + EA+ +F+ ++ RDV+ W +++ AY + G  ++   
Sbjct: 293 HGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALD 352

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK-------------LLLYN 292
           +F  +    + P++ ++  VL   + LG KR  + V A                 + +YN
Sbjct: 353 IFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYN 412

Query: 293 ---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                           + ++V W+  ++ Y Q G +   +E F  +++  +  D VT + 
Sbjct: 413 RCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVS 472

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYS--AVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
            L+A +           HG  LK G  S  +++  + L   Y    C+     D  + A 
Sbjct: 473 TLSACS-----------HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCM----VDLLSRAG 517

Query: 396 VLRASSS-------LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
            L A+ +       LP+ +  +  +    + NDT   + V+  L ++
Sbjct: 518 RLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 7/230 (3%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARRLFDKM 114
           +  +L    +  DL  G++ H ++       D  + N L+ MY++C  SL  AR++F+++
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERL 326

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             RD+I+WN ++ AY   G+       +   +F+ ++      + +TL+ +L  C   G 
Sbjct: 327 RTRDVITWNILIVAYVQYGQAK-----DALDIFKQMQLENVAPNEITLSNVLSACAVLGA 381

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
               + VH          D  +  +L+N+Y++ G + +   +F  ++++ +V W  ++ A
Sbjct: 382 KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAA 441

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           YA++G        F +L + GL  DD ++   L   S  G   +E VQ++
Sbjct: 442 YAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH-GGMLKEGVQSF 490


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  345 bits (886), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 214/658 (32%), Positives = 336/658 (51%), Gaps = 32/658 (4%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGK--IREAKFLFDGMQE--RDVVLWKVMLRA 234
           E +H +ALK G      V+ +L+N YS   +  +  A  +FD +    RDV  W  +L  
Sbjct: 32  EALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLNP 91

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
            + +   + +      L  S + P   S        +           A+A+   + +  
Sbjct: 92  LSGHRPLDALSRFRSMLSSSTVLPSPHSFA-AAFTAAARAASAPAGTAAHALACKIPSAV 150

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           SNV +    L+ Y ++G    A   F  M + N                           
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRN-------------------------SF 185

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
             +T+ +G Y+A        +++  M   C     +F   +VL A S +P GL + +Q+H
Sbjct: 186 SWSTMVAG-YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVS-VPLGLLMGEQMH 243

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K+  +    V  +L+ +Y + G M  A ++FE+    +  TW+AMI GY  +  + 
Sbjct: 244 GLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEAD 303

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
            A+ +FS MH +G    E T    + A   L  L  GKQ H   +K GFE+ + V S ++
Sbjct: 304 SAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALV 363

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY KCG + DA+  F+ +   D V WT M+SG V NGE + AL++Y +M   G++P + 
Sbjct: 364 DMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKS 423

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T A  ++A + + ALE G+Q+H  ++K        VG +L  MY+KCGN+ED   +F+++
Sbjct: 424 TIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRI 483

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             R+ + WN+++ G +Q+G G   L LFE+MK  G  PD++TFI +L ACS+ GLV   +
Sbjct: 484 PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGW 543

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
           E F LM + YG+ P ++HY+ +VD L RAG  KEA + I S+  +    + R +LGACR 
Sbjct: 544 EYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRS 603

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             D + G +  E+LM L   DSSAY+LLSNI+A+  +W+DV   R  M+ + V KDP 
Sbjct: 604 LRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPG 661



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 239/600 (39%), Gaps = 94/600 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS--LVYARR 109
           S +Q+  +LR   S      G++ HA  L S       + N+L+  YS      L  A  
Sbjct: 13  SHTQFIELLRRRASCPRH--GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFA 70

Query: 110 LFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLL 166
           +FD +P   RD+ SWNS+L   +           +    FRS L  S    S  + A   
Sbjct: 71  VFDDIPPAARDVTSWNSLLNPLS------GHRPLDALSRFRSMLSSSTVLPSPHSFAAAF 124

Query: 167 KLCLSSGYVWASETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
                +    A    H  A KI   V + +V  +L+N+Y K G + +A+ +FDGM +R+ 
Sbjct: 125 TAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNS 184

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES---VQCVLGVIS-DLGKRHEEQV 281
             W  M+  YA     EE F LF  +     CP ++S      VL  +S  LG    EQ+
Sbjct: 185 FSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQM 242

Query: 282 QAYAIK-------------LLLY---------------NNNSNVVLWNKKLSGYLQVGDN 313
               +K             + +Y               +   N + W+  ++GY Q G+ 
Sbjct: 243 HGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEA 302

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M  +       TF+  L A +    L +G+Q HG  +K GF   + V ++L
Sbjct: 303 DSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSAL 362

Query: 374 INMYSKMGCVC-------------------------------------------GLRTDQ 390
           ++MY+K GC+                                            G+   +
Sbjct: 363 VDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSK 422

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T+AS LRA + +   L   KQ+H   +K      + V +AL  +Y + G++ +   +F 
Sbjct: 423 STIASGLRACAGI-AALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 481

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D+  WN++I G+  +   + AL+LF  M   G   D IT    + AC  + ++ +
Sbjct: 482 RIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDR 541

Query: 511 GKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
           G +  +   K  G    L   + ++D+  + G + +A+     I        W  ++  C
Sbjct: 542 GWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGAC 601



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 7/183 (3%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMY--VKCGAMVDAQSIFNDIP--APDDVAWTTM 564
           + G+ +HA+A+KSG      V++ +++ Y  +    +  A ++F+DIP  A D  +W ++
Sbjct: 29  RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88

Query: 565 ISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           ++    +   D ALS +  M   S V+P   +FA    A++   +   G   HA   K+ 
Sbjct: 89  LNPLSGHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147

Query: 624 CS-SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
            + S+ +V  SL++MY K G + DA  +F  M  RN+  W+ M+ G A     EE   LF
Sbjct: 148 SAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF 207

Query: 683 EDM 685
             M
Sbjct: 208 RLM 210


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 217/717 (30%), Positives = 349/717 (48%), Gaps = 99/717 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N V W   ++ + + G    A+  +  M+   ++ D   F+VA+   + + +L  GQ +H
Sbjct: 22  NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLH 81

Query: 356 GTTLKSGFYS-AVIVGNSLINMYSK-------------MGCVC----------------- 384
              L++      +I+G +LI MY++             MG                    
Sbjct: 82  AMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141

Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           G++ D  T +S L A + + + +   ++I    + +   +DS V
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD-ISQGREIEARTVASGYASDSIV 200

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             ALI++Y + GS+  A  +F+     D+  WN MI GY     + +ALELF  M  +  
Sbjct: 201 QNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP 260

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA-MVDAQ 547
           + + +T    + AC  L  L+QG+ +H    + G+E DL + + +L+MY KC + + +A+
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEAR 320

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F  +   D + W  +I   V  G+   AL I+ QM+L  V P+E T + ++ A + L 
Sbjct: 321 QVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A  QG+ +HA +    C +D  +  SL++MY +CG+++D   +F  +  ++ V W+ ++ 
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             AQHG+    L+ F ++   G+  D VT +  LSACS+ G++ E  + F  M   +G+ 
Sbjct: 441 AYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLA 500

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P+  H+  +VD L RAGR + A  LI  MPF   A    +LL  C++  DT+    VA+K
Sbjct: 501 PDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADK 560

Query: 788 LMALEPFDS-SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------- 832
           L  LE  D  S   LLSN++A A +WDDV   R    R+  +K+P               
Sbjct: 561 LFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFV 617

Query: 833 ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                    +LI A+++ L K++K+ GYVPD   VL +V+EEEKE+ L YHSEKLA AYG
Sbjct: 618 AGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYG 677

Query: 884 LISTPPS----------------------SVILSNKEPLY-ANRFHHLRDGMCPCAD 917
           LISTPP                       S I+  K  +  + RFHH  +G C C D
Sbjct: 678 LISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKD 734



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 147/636 (23%), Positives = 266/636 (41%), Gaps = 122/636 (19%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CGS+  A  +F  +   + +SW  I+AA+A +G                 RE++ +
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGH---------------YREALGY 45

Query: 157 TSRLTLAPL----------LKLCLSSGYVWASETVHGYALKIGLV-WDEFVSGALVNIYS 205
             R+ L  L          + +C SS  +   + +H   L+  L+ +D  +  AL+ +Y+
Sbjct: 46  YRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYA 105

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL---HRSGLCPDDES 262
           +   +  A+  FD M ++ +V W  ++  Y+ NG       ++ D+      G+ PD  +
Sbjct: 106 RCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAIT 165

Query: 263 VQCVL---GVISDLGKRHEEQVQ----AYAIKLLLYN----------------------N 293
               L    V+ D+ +  E + +     YA   ++ N                       
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N +V+ WN  +SGY + G    A+E F  M  ++ + + VTF+  L A    ++L  G+ 
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           IH    + G+ S +++GN L+NMY+K                    SSSL E        
Sbjct: 286 IHRKVREDGYESDLVIGNVLLNMYTK-------------------CSSSLEE-------- 318

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                                          A  +FE     D+ TWN +I  Y+    +
Sbjct: 319 -------------------------------ARQVFERMRTRDVITWNILIVAYVQYGQA 347

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             AL++F  M       +EIT++  + AC  L   +QGK +HA       + D+ + + +
Sbjct: 348 KDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSL 407

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           ++MY +CG++ D   +F  I     V+W+T+I+    +G     L  + ++   G+  D+
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467

Query: 594 FTFAILVKASSCLTALEQGRQIHANLI-KLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
            T    + A S    L++G Q   +++     + D    + +VD+ ++ G +E A  L  
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527

Query: 653 QMD-MRNTVLWNAMLVGLAQHGNGEETL----KLFE 683
            M  + + V W ++L G   H + +       KLFE
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 185/393 (47%), Gaps = 48/393 (12%)

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+A+A  +F   +  +  +W  ++  +  + +  +AL  +  M   G R D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
              A+  C     LKQG+ +HA  +++   E D+ + + ++ MY +C  +  A+  F+++
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQM---RLSGVVPDEFTFAILVKASSCLTALE 610
                V W  +I+G   NG+   AL IY  M      G+ PD  TF+  + A + +  + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QGR+I A  +    +SD  V  +L++MY+KCG++E A  +F ++  R+ + WN M+ G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS------------------------- 705
           + G   + L+LF+ M  +  +P+ VTFIG+L+AC+                         
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 706 --------YTGLVS---EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
                   YT   S   EA + F  MR +     +V  ++ L+ A  + G+ K+A ++  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTR-----DVITWNILIVAYVQYGQAKDALDIFK 355

Query: 755 SMPFEASASMHRAL---LGACRVQGDTETGKWV 784
            M  E  A     L   L AC V G    GK V
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 230/554 (41%), Gaps = 128/554 (23%)

Query: 65  STSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           S+ DL  G+  HA IL +  +  D  L   L+TMY+RC  L  AR+ FD+M  + L++WN
Sbjct: 70  SSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSL---------RESITFTSRLTLAPLLKLCLSSGY 174
           +++A Y+ +G+          ++++ +          ++ITF+S       L  C   G 
Sbjct: 130 ALIAGYSRNGDHRG-----ALKIYQDMVSKSPEGMKPDAITFSS------ALYACTVVGD 178

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +     +    +  G   D  V  AL+N+YSK G +  A+ +FD ++ RDV+ W  M+  
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--------DLGKRHEEQVQ--AY 284
           YA+ G   +   LF    R G      +V   +G+++        + G+    +V+   Y
Sbjct: 239 YAKQGAATQALELF---QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGY 295

Query: 285 AIKLLLYN-----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
              L++ N                          +V+ WN  +  Y+Q G    A++ F 
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFK 355

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M   NV  + +T    L+A A       G+ +H         + V++ NSL+NMY++  
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNR-- 413

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNG 440
             CG   D   + + +R                           S VS + LI  Y ++G
Sbjct: 414 --CGSLDDTVGVFAAIRDK-------------------------SLVSWSTLIAAYAQHG 446

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
                                          +S   LE F  +   G   D++T+ + + 
Sbjct: 447 -------------------------------HSRTGLEHFWELLQEGLAADDVTMVSTLS 475

Query: 501 ACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP- 554
           AC    MLK+G Q     +  + +   +   LC    ++D+  + G +  A+++ +D+P 
Sbjct: 476 ACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLC----MVDLLSRAGRLEAAENLIHDMPF 531

Query: 555 APDDVAWTTMISGC 568
            PD VAWT+++SGC
Sbjct: 532 LPDAVAWTSLLSGC 545



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 184/417 (44%), Gaps = 48/417 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+  G+   AR + S    D  + N L+ MYS+CGSL  AR++FD++ +RD+I+WN++++
Sbjct: 178 DISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMIS 237

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            YA  G       T+   LF+ +  +    + +T   LL  C +   +     +H    +
Sbjct: 238 GYAKQGAA-----TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRE 292

Query: 188 IGLVWDEFVSGALVNIYSKF-GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            G   D  +   L+N+Y+K    + EA+ +F+ M+ RDV+ W +++ AY + G  ++   
Sbjct: 293 DGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALD 352

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN--NSNVVLWNKKL 304
           +F  +    + P++ ++  VL   + LG +     Q  A+  L+ +    ++VVL N  +
Sbjct: 353 IFKQMQLENVAPNEITLSNVLSACAVLGAKR----QGKAVHALIASGRCKADVVLENSLM 408

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           + Y + G     +  F   IR        T + A A           Q  H  T    F+
Sbjct: 409 NMYNRCGSLDDTVGVFA-AIRDKSLVSWSTLIAAYA-----------QHGHSRTGLEHFW 456

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKND 421
             +                 GL  D  T+ S L A S    L EG+    Q  +  + + 
Sbjct: 457 ELLQE---------------GLAADDVTMVSTLSACSHGGMLKEGV----QTFLSMVGDH 497

Query: 422 TVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKA 476
            +A  +     ++D+  R G +  AE L  +     D   W +++ G  L N++ +A
Sbjct: 498 GLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 7/230 (3%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARRLFDKM 114
           +  +L    +  DL  G++ H ++       D  + N L+ MY++C  SL  AR++F++M
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERM 326

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             RD+I+WN ++ AY   G+       +   +F+ ++      + +TL+ +L  C   G 
Sbjct: 327 RTRDVITWNILIVAYVQYGQAK-----DALDIFKQMQLENVAPNEITLSNVLSACAVLGA 381

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
               + VH          D  +  +L+N+Y++ G + +   +F  ++++ +V W  ++ A
Sbjct: 382 KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAA 441

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           YA++G        F +L + GL  DD ++   L   S  G   +E VQ +
Sbjct: 442 YAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH-GGMLKEGVQTF 490


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 200/587 (34%), Positives = 304/587 (51%), Gaps = 54/587 (9%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N + VLWN  L+G+++ G+ + A++ F +M     + +S+TF   L+  A       G Q
Sbjct: 35  NKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQ 94

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +HG  +  GF+   +V N+L+ MYSK G +                              
Sbjct: 95  LHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGF 154

Query: 384 -------------CGLRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                         G+  D  T AS L +   S+SL +G    K+IH + +++    D F
Sbjct: 155 MDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQG----KEIHGYILRHGIALDVF 210

Query: 428 VSTALIDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
           + +ALID+Y  CR+  MA    +F+     D+    A+I GY+L+  ++ ALE+F  +  
Sbjct: 211 LKSALIDIYFKCRDVGMACK--IFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLE 268

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
                + +T+A+ + AC  L  L  GK++HA  +K G +    V S I+DMY KCG +  
Sbjct: 269 EKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDL 328

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A  IF  +P  D V W  +I+ C  NG+   A+ ++ QM   G+  D  + +  + A + 
Sbjct: 329 AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACAN 388

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L AL  G+ IH+ +IK    S+ F   +L+DMY KCGN+  A  +F  M  +N V WN++
Sbjct: 389 LPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSI 448

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           +     HG+ E +L LF  M   G++PD VTF+ +LSAC + G V +  + F  M E+YG
Sbjct: 449 IAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYG 508

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I   +EHY+ +VD  GRAGR  EA E I +MPF     +   LLGACRV G+ E  +  +
Sbjct: 509 IPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVAS 568

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             L+ L+P +S  YVLLSN+ A A QW  V   R  MK++ V+K P 
Sbjct: 569 RCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPG 615



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 264/569 (46%), Gaps = 88/569 (15%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D F+ ++L+ +Y+  G +  ARRLFDKMP++D + WN +L  +   GE N+       ++
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNS-----AVKV 60

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +R   T  + +T A +L +C S         +HG  +  G  +D  V+ ALV +YSK
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           FG++ +A  LF+ M + +VV W  M+  + +NGF +E   LF ++  +G+ PD  +    
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 267 LGVISDLGK-RHEEQVQAY----------------------------AIKLLLYNNNSNV 297
           L  +++    +  +++  Y                            A K+   + N ++
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V+    +SGY+  G N+ A+E F  ++   +  ++VT    L A AG   LNLG+++H  
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG----------------CVC----------------- 384
            LK G      VG+++++MY+K G                 VC                 
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 385 ----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     GL  D  ++++ L A ++LP  LH  K IH   IK    ++ F  +ALID
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLP-ALHHGKAIHSFMIKGAFDSEVFAESALID 419

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G+++ A  +F+     +  +WN++I  Y    +   +L LF  M   G + D +T
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479

Query: 495 IATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
             T + ACG    + +G Q        Y + +  E   C    I+D++ + G + +A   
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYAC----IVDLFGRAGRLNEAFET 535

Query: 550 FNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             ++P +PDD  W T++  C  +G  +LA
Sbjct: 536 IKNMPFSPDDGVWGTLLGACRVHGNVELA 564



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 265/570 (46%), Gaps = 89/570 (15%)

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G   DEFV  +L+ +Y++ G I +A+ LFD M  +D VLW VML  + + G       +
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 248 FVDLHRSGLCPDDESVQCVLGV-----ISDLGKR----------HEEQVQAYAI------ 286
           F D+      P+  +   VL +     +S+ G +          H + + A A+      
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 287 ------KLLLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                  L L+N   ++NVV WN  ++G++Q G    A   F  MI + V  DS+TF   
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-----MGC----------- 382
           L +V  + +L  G++IHG  L+ G    V + ++LI++Y K     M C           
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 383 -VC----------GLRTDQF----------------TLASVLRASSSLPEGLHLSKQIHV 415
            VC          GL  D                  TLASVL A + L   L+L K++H 
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLAT-LNLGKELHA 299

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           + +K+       V +A++D+Y + G +  A  +F      D   WNA+I     +    +
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQE 359

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A++LF  M   G   D ++I+ A+ AC  L  L  GK +H++ +K  F+ ++   S ++D
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALID 419

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG +  A+ +F+ +   ++V+W ++I+    +G  +++L+++H+M   G+ PD  T
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDA 647
           F  +      L+A     Q+   +    C ++ + GI         +VD++ + G + +A
Sbjct: 480 FLTI------LSACGHAGQVDKGIQYFRCMTEEY-GIPARMEHYACIVDLFGRAGRLNEA 532

Query: 648 YILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +   K M    +  +W  +L     HGN E
Sbjct: 533 FETIKNMPFSPDDGVWGTLLGACRVHGNVE 562



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 180/355 (50%), Gaps = 2/355 (0%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D FV ++LI +Y  NG + +A  LF+     D   WN M+ G++     + A+++F  M 
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
               + + IT A+ +  C    + + G Q+H   +  GF  D  V++ ++ MY K G + 
Sbjct: 66  NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           DA  +FN +P  + V W  MI+G V NG  D A  ++ +M  +GV PD  TFA  + + +
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
              +L+QG++IH  +++   + D F+  +L+D+Y KC ++  A  +FKQ    + V+  A
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           ++ G   +G   + L++F  +    + P++VT   VL AC+    ++   E  H    K+
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKE-LHANILKH 304

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           G++      S ++D   + GR   A ++   MP E  A    A++  C   G  +
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITNCSQNGKPQ 358



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 1/217 (0%)

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           GF +D  V S ++ +Y + G + DA+ +F+ +P  D V W  M++G V  GE + A+ ++
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
             MR     P+  TFA ++   +     E G Q+H  +I      DP V  +LV MY+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G + DA  LF  M   N V WN M+ G  Q+G  +E   LF +M + GV PDS+TF   L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
            + + +  + +  E  H    ++GI  +V   S L+D
Sbjct: 182 PSVTESASLKQGKE-IHGYILRHGIALDVFLKSALID 217



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 143/333 (42%), Gaps = 34/333 (10%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S  S  + S L     ++ L  GK  H  IL      D FL + L+ +Y +C  +  A +
Sbjct: 171 SPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACK 230

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +F +  + D++   +I++ Y  +G  N     +   +FR L E     + +TLA +L  C
Sbjct: 231 IFKQSTNVDIVVCTAIISGYVLNGLNN-----DALEIFRWLLEEKMSPNAVTLASVLPAC 285

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
                +   + +H   LK GL     V  A++++Y+K G++  A  +F  M E+D V W 
Sbjct: 286 AGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWN 345

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK- 287
            ++   ++NG  +E   LF  + R GL  D  S+   L   ++L    H + + ++ IK 
Sbjct: 346 AIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKG 405

Query: 288 ------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECF 320
                       + +Y    N+               V WN  ++ Y   G    ++  F
Sbjct: 406 AFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALF 465

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             M+   +Q D VTFL  L+A      ++ G Q
Sbjct: 466 HKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ 498


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 220/727 (30%), Positives = 356/727 (48%), Gaps = 97/727 (13%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAV 342
           A+K+  Y    N+V WN  +SG+ + G +    +  V M+     +  D  T +  L   
Sbjct: 85  AVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC 144

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------- 381
           A   ++ +G +IHG  +K G    V V NSL++MYSK G                     
Sbjct: 145 AREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWN 204

Query: 382 ------CVCGLRTDQFTLASVLRASSS-----------LPEGLHLS-----KQIHVHAIK 419
                 C  G   + F L   ++               LP  L +S     K++H ++I+
Sbjct: 205 TMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIR 264

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           +    D  V+   +  Y + G +  AE +F + +   + +WNA+I G   + +  KAL L
Sbjct: 265 HGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNL 324

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           +  M  SG   D  TI + + A   L  L+ GK++H + ++ G E+D  +   +L +Y+ 
Sbjct: 325 YIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIH 384

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG    A+ +F+ +     V+W  MISG   NG  + AL ++ ++   G  P +     +
Sbjct: 385 CGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSV 444

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A S  +AL  G++ H   +K     D FV  S +DMYAK G I+++  +F  +  ++ 
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
             WNA++     HG+GEE+++LFE M+  G  PD  TFIG+L+ CS+ GLV E  + F+ 
Sbjct: 505 ASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNE 564

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M+  +GIEP++EHY+ ++D LGRAGR  +A  L+  MP +  + +  +LL  CR  G+ E
Sbjct: 565 MQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELE 624

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
            G+ VAEKL+ LEP +   YV LSN++A + +WDDV   R  +K   ++KD         
Sbjct: 625 IGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELG 684

Query: 833 -------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                               + + K+E   K++ + GY P+T  VL DV+EE+K   L  
Sbjct: 685 GKVHSFVAGDNLLPQSKEMSMTWRKLE---KKMCKIGYKPNTSAVLHDVDEEKKIEKLRG 741

Query: 874 HSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRD 910
           HSEKLA  +GL++T   + +                     ++ +E +  +  RFHH +D
Sbjct: 742 HSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKD 801

Query: 911 GMCPCAD 917
           G+C C D
Sbjct: 802 GLCSCGD 808



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 153/614 (24%), Positives = 274/614 (44%), Gaps = 93/614 (15%)

Query: 138 ENVTEGFRLFRSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
           E  ++   +F  L     F +   T   ++K C  S      E +HG  +K+GL+ D FV
Sbjct: 9   ELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFV 68

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH--RS 254
             AL+ +Y KFG +  A  +F  M  R++V W  ++  ++ENGF ++ F + V++     
Sbjct: 69  GNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEE 128

Query: 255 GLCPDDESVQCVLGVIS-DLGKRHEEQVQAYAIKLLL----------------------- 290
           GL PD  ++  VL V + ++  +   ++   A+KL L                       
Sbjct: 129 GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEA 188

Query: 291 -----YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAG 344
                 NN  N V WN  + G    G    A   F  M ++ +++ + VT L  L A   
Sbjct: 189 QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLE 248

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-CVC------------------- 384
              L   +++HG +++ GF    +V N  +  Y+K G  +C                   
Sbjct: 249 ISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNAL 308

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  GL  D FT+ S+L AS+ L + L   K++H   +++ 
Sbjct: 309 IGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHL-KSLRYGKEVHGFVLRHG 367

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              DSF+  +L+ +Y   G  + A  LF+  +     +WNAMI GY  +     AL LF 
Sbjct: 368 LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFR 427

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            + + G +  +I + + + AC     L+ GK+ H YA+K+    D+ V+   +DMY K G
Sbjct: 428 KLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSG 487

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            + +++S+F+ +   D  +W  +I+    +G+ + ++ ++ +MR  G +PD FTF  ++ 
Sbjct: 488 CIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILT 547

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDAYILFKQ 653
             S    +E+G +    +         F GI         ++DM  + G ++DA  L  +
Sbjct: 548 VCSHAGLVEEGLKYFNEM-------QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHE 600

Query: 654 M-DMRNTVLWNAML 666
           M +  ++ +W+++L
Sbjct: 601 MPEQPDSRVWSSLL 614



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 262/596 (43%), Gaps = 83/596 (13%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++    + D  LG+  H  ++    + D F+ N L+ MY + G +  A ++F  MP R+
Sbjct: 37  VIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRN 96

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLR--ESITFTSRLTLAPLLKLCLSSGYVW 176
           L+SWNSI++ ++ +G        + F +   +   E        TL  +L +C     V 
Sbjct: 97  LVSWNSIISGFSENGFSK-----DCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQ 151

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +HG A+K+GL  D  V+ +LV++YSK G + EA+ LFD    ++ V W  M+    
Sbjct: 152 MGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLC 211

Query: 237 ENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------- 287
             G+  E F+LF ++  +  +  ++ +V  +L    ++ + R  +++  Y+I+       
Sbjct: 212 TKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDE 271

Query: 288 --------------------LLLYNNNSNVV-LWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                + Y+  +  V  WN  + G  Q GD   A+  ++ M  S
Sbjct: 272 LVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYS 331

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----- 381
            +  D  T    L A A   +L  G+++HG  L+ G      +G SL+++Y   G     
Sbjct: 332 GLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSA 391

Query: 382 --------------------------------------CVCGLRTDQFTLASVLRASSSL 403
                                                    G +     + SVL A S  
Sbjct: 392 RLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ- 450

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L L K+ H +A+K   + D FV+ + ID+Y ++G + E+  +F+     DLA+WNA+
Sbjct: 451 QSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAI 510

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSG 522
           I  Y +  +  +++ELF  M   G+  D  T    +  C    ++++G K  +      G
Sbjct: 511 IAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHG 570

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            E  L   + ++DM  + G + DA  + +++P  PD   W++++S C + GE ++ 
Sbjct: 571 IEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIG 626



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 6/306 (1%)

Query: 476 ALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           A+++F  + T  E   D  T    +KAC   L    G+ +H   +K G  LD+ V + ++
Sbjct: 14  AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS--GVVPD 592
            MY K G +  A  +F+ +P  + V+W ++ISG  +NG       +  +M     G++PD
Sbjct: 74  AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
             T   ++   +    ++ G +IH   +KL  S D  V  SLVDMY+KCG + +A +LF 
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD 193

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVS 711
           + + +N V WN M+ GL   G   E   LF +M+    +E + VT + +L AC     + 
Sbjct: 194 KNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
              E  H    ++G + +    +  V A  + G    A  +  SM  +   S + AL+G 
Sbjct: 254 SLKE-LHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN-ALIGG 311

Query: 772 CRVQGD 777
           C   GD
Sbjct: 312 CAQNGD 317



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 147/351 (41%), Gaps = 47/351 (13%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            +IL   +  S L   K  H   +      D  + N  +  Y++CG L+ A R+F  M  
Sbjct: 240 LNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET 299

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           + + SWN+++   A +G+       +   L+  +  S       T+  LL   L+S ++ 
Sbjct: 300 KTVNSWNALIGGCAQNGDPR-----KALNLYIQMTYSGLVPDWFTIGSLL---LASAHLK 351

Query: 177 A---SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
           +    + VHG+ L+ GL  D F+  +L+++Y   G+   A+ LFDGM+E+  V W  M+ 
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYN 292
            Y++NG  E+   LF  L   G  P D +V  VLG  S     R  ++   YA+K LL  
Sbjct: 412 GYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLME 471

Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           +                            N ++  WN  ++ Y   GD   +IE F  M 
Sbjct: 472 DVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMR 531

Query: 325 RSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           +     D  TF+  L   +       G    N  Q  HG   K   Y+ V+
Sbjct: 532 KVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVM 582



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 8/222 (3%)

Query: 56  WFSI---LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           WF+I   L  +     L  GK  H  +L      D F+  +L+++Y  CG    AR LFD
Sbjct: 337 WFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFD 396

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            M ++  +SWN++++ Y+ +G        +   LFR L       S + +  +L  C   
Sbjct: 397 GMEEKSSVSWNAMISGYSQNGLPE-----DALILFRKLVSDGFQPSDIAVVSVLGACSQQ 451

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   +  H YALK  L+ D FV+ + +++Y+K G I+E++ +FDG++ +D+  W  ++
Sbjct: 452 SALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAII 511

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            AY  +G GEE   LF  + + G  PD  +   +L V S  G
Sbjct: 512 AAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAG 553


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 222/663 (33%), Positives = 346/663 (52%), Gaps = 78/663 (11%)

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N++ +     G    A E F+    S +  +   F   L A     +++LG+Q+H     
Sbjct: 42  NEQFATLCSKGHIREAFESFL----SEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFT 97

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           SG  S   + N L+N+YSK G           L + +     +P    +S  I       
Sbjct: 98  SGCSSDKFISNHLLNLYSKFG----------ELQAAVALFDRMPRRNIMSCNI------- 140

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                      +I  Y   G++  A+ LF+     ++ATWNAM+ G      + +AL LF
Sbjct: 141 -----------MIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLF 189

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
           S M+      DE ++ + ++ C  L  L  G+Q+HAY MK GFE +L V   +  MY+K 
Sbjct: 190 SRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA 249

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G+M D + + N +P    VAW T++SG    G  +  L  Y  M+++G  PD+ TF  ++
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVI 309

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            + S L  L QG+QIHA  +K   SS+  V  SLV MY++CG ++D+   F +   R+ V
Sbjct: 310 SSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVV 369

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           LW++M+     HG GEE +KLF +M+   +  + +TF+ +L ACS+ GL  +    F +M
Sbjct: 370 LWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMM 429

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
            +KYG++  ++HY+ LVD LGR+G  +EA  +I SMP +A A + + LL AC++  + E 
Sbjct: 430 VKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEI 489

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------- 831
            + VA++++ ++P DS++YVLL+NI+++AN+W +V+  R  MK K VKK+P         
Sbjct: 490 ARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKN 549

Query: 832 -------ADLIFAK-------VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                   D    K       +E L   IK  GYVPDT  VL D++ EEKE+ L +HSEK
Sbjct: 550 QVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEK 609

Query: 878 LARAYGLISTP---PSSVI---------------LSNKEPLY-----ANRFHHLRDGMCP 914
           LA A+ L++TP   P  V+               +S  + L      ++RFHH ++G C 
Sbjct: 610 LAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCS 669

Query: 915 CAD 917
           C D
Sbjct: 670 CGD 672



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 168/384 (43%), Gaps = 60/384 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+  I    + LGK  H+ I  S    D+F++N+L+ +YS+ G L  A  LFD+MP R
Sbjct: 74  NLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRR 133

Query: 118 DLISWNSILAAYAHSGEGNAEN------------------VTEGFRLFRSLRESITFTSR 159
           +++S N ++ AY   G GN E+                  +  G   F    E++   SR
Sbjct: 134 NIMSCNIMIKAYL--GMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 160 L----------TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +          +L  +L+ C   G + A + VH Y +K G   +  V  +L ++Y K G 
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + + + + + M +  +V W  ++   A+ G+ E V   +  +  +G  PD  +   V+  
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311

Query: 270 ISDL-----GKR-HEEQVQAYA-----------------------IKLLLYNNNSNVVLW 300
            S+L     GK+ H E V+A A                       IK  L     +VVLW
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           +  ++ Y   G    AI+ F  M + N+  + +TFL  L A +     + G  +    +K
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVK 431

Query: 361 S-GFYSAVIVGNSLINMYSKMGCV 383
             G  + +     L+++  + GC+
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCL 455



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 203/421 (48%), Gaps = 28/421 (6%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL----N 349
           +S+  + N  L+ Y + G+   A+  F  M R N+    ++  + + A  G  NL    N
Sbjct: 101 SSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNI----MSCNIMIKAYLGMGNLESAKN 156

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINM-------YSKMGCVCGLRTDQFTLASVLRASSS 402
           L  ++    + +  ++A++ G +   M       +S+M  +     D+++L SVLR  + 
Sbjct: 157 LFDEMPDRNVAT--WNAMVTGLTKFEMNEEALLLFSRMNEL-SFMPDEYSLGSVLRGCAH 213

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L   +Q+H + +K     +  V  +L  +Y + GSM + E +        L  WN 
Sbjct: 214 LG-ALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNT 272

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           ++ G          L+ +  M  +G R D+IT  + + +C  L +L QGKQ+HA A+K+G
Sbjct: 273 LMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAG 332

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
              ++ V S ++ MY +CG + D+   F +    D V W++MI+    +G+ + A+ +++
Sbjct: 333 ASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFN 392

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYA 639
           +M    +  +E TF  L+ A S     ++G  +   ++K   L      +    LVD+  
Sbjct: 393 EMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYT--CLVDLLG 450

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTF 697
           + G +E+A  + + M ++ + ++W  +L     H N E   ++ +++    ++P DS ++
Sbjct: 451 RSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLR--IDPQDSASY 508

Query: 698 I 698
           +
Sbjct: 509 V 509



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 35/337 (10%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +LL F + +  S         S+LR       LL G+  HA ++      +  +  +L  
Sbjct: 185 ALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAH 244

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG--EGNAENVT----EGFRLFRSL 150
           MY + GS+    R+ + MPD  L++WN++++  A  G  EG  +        GFR     
Sbjct: 245 MYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFR----- 299

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
            + ITF S      ++  C     +   + +H  A+K G   +  V  +LV++YS+ G +
Sbjct: 300 PDKITFVS------VISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCL 353

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           +++   F   +ERDVVLW  M+ AY  +G GEE   LF ++ +  L  ++ +   +L   
Sbjct: 354 QDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYAC 413

Query: 271 SDLGKRH------EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           S  G +       +  V+ Y +K  L +    V L  +            G +E    MI
Sbjct: 414 SHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRS-----------GCLEEAEAMI 462

Query: 325 RS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           RS  V+ D++ +   L+A     N  + +++    L+
Sbjct: 463 RSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLR 499


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 224/714 (31%), Positives = 356/714 (49%), Gaps = 97/714 (13%)

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
           C    +++C      D  KR +  +  +  K       ++  + N+ L+ Y + G+   A
Sbjct: 24  CYTRLALECFRASDVDQAKRLKSHMHLHLFK------PNDTFIHNRLLNLYAKSGEISHA 77

Query: 317 IECFVNMI-RSNVQYDSVTFLVALAAVAGT-----DNLNLGQQIHGTTLKSGFYSAVIVG 370
            + F  M  R N  ++++  L A + +        DN+     +   T+ SGF +    G
Sbjct: 78  RKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGF-AGNGRG 136

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
              + ++ +M    GL+  ++T  SVL A + L + L   KQIH   I  +   + FV  
Sbjct: 137 GPALGVFLRMQKE-GLKPTEYTHVSVLNACTQLLD-LRRGKQIHGRIIICNLGGNVFVCN 194

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           AL D+Y R G + +A  LF+     ++ TWN MI GY+ +    K ++LF  M  S  + 
Sbjct: 195 ALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKP 254

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D++T                                   +S +L  Y++ G + +A+ +F
Sbjct: 255 DQVT-----------------------------------ASSVLGAYIQAGYIDEARKVF 279

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
            +I   D+V WT MI GC  NG+E+ AL ++ +M L    PD +T + +V + + L +L 
Sbjct: 280 GEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLY 339

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G+ +H     +  + D  V  +LVDMY KCG   DA+ +F  M  RN V WN+M+ G A
Sbjct: 340 HGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYA 399

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            +G   E L L+E+M    ++PDSVTF+GVLSAC + GLV E  E F  M +++G+EP  
Sbjct: 400 LNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTP 459

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           +HY+ +V+  GR+G   +A +LI SM  E ++ +   +L  C ++GD + G+  A  L+ 
Sbjct: 460 DHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIE 519

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK--------------------- 829
           L PF++  Y++LSN++AA  +W DV S R  MK K+VKK                     
Sbjct: 520 LNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDR 579

Query: 830 --DPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               A +I  ++  LI++++E G+ P+T+ VL D  E+EK  ++ YHSEKLA AYGLI  
Sbjct: 580 THPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKK 639

Query: 888 P----PSSVI---------------LSN--KEPLY---ANRFHHLRDGMCPCAD 917
           P    P  +I               +SN  + P+    +NRFHH  +G C C D
Sbjct: 640 PHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKD 693



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 221/489 (45%), Gaps = 62/489 (12%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D F+   L+N+Y+K G+I  A+ LFD M +RD   W  ML  YA++G  E++  +F ++ 
Sbjct: 57  DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM- 115

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                P  +SV                                    +N  +SG+   G 
Sbjct: 116 -----PSRDSVS-----------------------------------YNTVISGFAGNGR 135

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A+  F+ M +  ++    T +  L A     +L  G+QIHG  +       V V N+
Sbjct: 136 GGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNA 195

Query: 373 LINMYSKMGCVCGLRT--DQFTLASVLR--------ASSSLPEG-LHLSKQIHVHAIKND 421
           L ++Y++ G +   R   D+  + +V+           +  PE  + L  ++ V  +K D
Sbjct: 196 LTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPD 255

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
            V     +++++  Y + G + EA  +F      D   W  MI G   +     AL LFS
Sbjct: 256 QVT----ASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFS 311

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M     R D  TI++ V +C  L  L  G+ +H  A   G   DL VSS ++DMY KCG
Sbjct: 312 EMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCG 371

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
              DA +IF+ +   + V+W +MI G   NG++  ALS+Y  M    + PD  TF  ++ 
Sbjct: 372 VTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLS 431

Query: 602 ASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR- 657
           A      +E+G++   ++     L+ + D +    +V+++ + G+++ A  L   M    
Sbjct: 432 ACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYA--CMVNLFGRSGHMDKAVDLISSMSQEP 489

Query: 658 NTVLWNAML 666
           N+++W  +L
Sbjct: 490 NSLIWTTVL 498



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 217/505 (42%), Gaps = 73/505 (14%)

Query: 72  GKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G+ +HAR + +     D F  N ++++Y++ G +   R +FD MP RD +S+N++++ +A
Sbjct: 72  GEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFA 131

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G G          +F  +++     +  T   +L  C     +   + +HG  +   L
Sbjct: 132 GNGRGGP-----ALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNL 186

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             + FV  AL ++Y++ G+I +A+ LFD M  R+VV W +M+  Y +N   E+   LF +
Sbjct: 187 GGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHE 246

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
           +  S L PD  +   VLG     G   E      A K+       + V W   + G  Q 
Sbjct: 247 MQVSNLKPDQVTASSVLGAYIQAGYIDE------ARKVFGEIREKDEVCWTIMIVGCAQN 300

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G    A+  F  M+  N + D  T    +++ A   +L  GQ +HG     G    ++V 
Sbjct: 301 GKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVS 360

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           ++L++MY    C CG+  D +T+ S ++  + +                           
Sbjct: 361 SALVDMY----CKCGVTRDAWTIFSTMQTRNVVS------------------------WN 392

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ++I  Y  NG   EA  L+EN                               M     + 
Sbjct: 393 SMIGGYALNGQDLEALSLYEN-------------------------------MLEENLKP 421

Query: 491 DEITIATAVKACGCLLMLKQGKQMH-AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           D +T    + AC    ++++GK+   + + + G E      + +++++ + G M  A  +
Sbjct: 422 DSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDL 481

Query: 550 FNDIPA-PDDVAWTTMISGCVDNGE 573
            + +   P+ + WTT++S CV  G+
Sbjct: 482 ISSMSQEPNSLIWTTVLSVCVMKGD 506



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 114/276 (41%), Gaps = 71/276 (25%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       DL  GK  H RI+  +   + F+ N L  +Y+RCG +  ARRLFD+M  R
Sbjct: 160 SVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR 219

Query: 118 DLISWN-----------------------------------SILAAYAHSGEGNAENVTE 142
           ++++WN                                   S+L AY  +G      + E
Sbjct: 220 NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGY-----IDE 274

Query: 143 GFRLFRSLRES----------------------ITFTSRL---------TLAPLLKLCLS 171
             ++F  +RE                       + F+  L         T++ ++  C  
Sbjct: 275 ARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAK 334

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              ++  + VHG A  +G+  D  VS ALV++Y K G  R+A  +F  MQ R+VV W  M
Sbjct: 335 LASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSM 394

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           +  YA NG   E   L+ ++    L PD  +   VL
Sbjct: 395 IGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVL 430



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 10/206 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      + L  G+  H +        D  +++ L+ MY +CG    A  +F  M  R
Sbjct: 327 SVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTR 386

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
           +++SWNS++  YA +G+       E   L+ ++ E       +T   +L  C+ +G V  
Sbjct: 387 NVVSWNSMIGGYALNGQD-----LEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEE 441

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAY 235
             E     + + GL         +VN++ + G + +A  L   M QE + ++W  +L   
Sbjct: 442 GKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVC 501

Query: 236 AENG---FGEEVFHLFVDLHRSGLCP 258
              G    GE      ++L+     P
Sbjct: 502 VMKGDIKHGEMAARCLIELNPFNAVP 527


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 308/559 (55%), Gaps = 47/559 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + L   +Q+H H +K       +++T LI +Y R G++ +A  + +     ++ +W AMI
Sbjct: 55  QALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMI 114

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  S    +ALELF  M  +G + +E T+AT + +C     ++Q +Q+H+  +K+ FE
Sbjct: 115 SGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFE 174

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             + V S +LDMY K G + +A+ +F+ +P  D V+ T +ISG    G +D AL ++ Q+
Sbjct: 175 SHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQL 234

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
             SG+  +  TF  L+ + S L +L  G+Q+H  +++ +      +  SL+DMY+KCG +
Sbjct: 235 YSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKL 294

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             +  +F  M  R+ + WNAML+G  +HG G+E ++LF  M    V+PDSVT + VLS C
Sbjct: 295 LYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGC 353

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV E  + F L+ ++      + HY  ++D LGR+G+ ++A +LI  MPFE + ++
Sbjct: 354 SHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAI 413

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             +LLGACRV  +   G+ VA+KL+ +EP ++  YV+LSNI+AAA  W DV   R  M  
Sbjct: 414 WGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLE 473

Query: 825 KNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLD 861
             V K+PA                         I AK++ +   +K  G+VPD   VL D
Sbjct: 474 NTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHD 533

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA---- 902
           V++E+KER L  HSEKLA  +GL++TPP   I   K                 +Y     
Sbjct: 534 VDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREIS 593

Query: 903 ----NRFHHLRDGMCPCAD 917
               NRFH L+DG C C D
Sbjct: 594 LRDKNRFHLLKDGACTCGD 612



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 158/277 (57%), Gaps = 3/277 (1%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A+ AC     L +G+Q+HA+ +K+ +   + +++ ++ +YV+CGA+ DA+++ + +P  +
Sbjct: 47  AITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERN 106

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+WT MISG   +G    AL ++ +M  +G   +EFT A ++ +     +++Q  Q+H+
Sbjct: 107 VVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHS 166

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            ++K +  S  FVG SL+DMY K GNI++A  +F  +  R+TV   A++ G AQ G  +E
Sbjct: 167 LVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDE 226

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYSFL 736
            L LF  + + G++ + VTF  +L+  S +GL S  Y +  H +  +  +   +   + L
Sbjct: 227 ALDLFRQLYSSGMQCNYVTFTTLLT--SLSGLASLNYGKQVHGLILRKELPFFIVLQNSL 284

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
           +D   + G+   +  +  +MP  ++ S +  L+G  R
Sbjct: 285 IDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGR 321



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 42/333 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA ++ +   P  +L   L+ +Y RCG+L  AR + D MP+R+++SW ++++ Y+ 
Sbjct: 60  GRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQ 119

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           SG        E   LF  +  +    +  TLA +L  C     +   E VH   +K    
Sbjct: 120 SGRH-----AEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFE 174

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              FV  +L+++Y K G I+EA+ +FD + ERD V    ++  YA+ G  +E   LF  L
Sbjct: 175 SHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQL 234

Query: 252 HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK---------------------LL 289
           + SG+  +  +   +L  +S L    + +QV    ++                      L
Sbjct: 235 YSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKL 294

Query: 290 LYNN-------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           LY+          + + WN  L GY + G     ++ F  M    V+ DSVT L  L+  
Sbjct: 295 LYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGC 353

Query: 343 A-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           +       G D  +L  +     +  G Y  VI
Sbjct: 354 SHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVI 386



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 153/310 (49%), Gaps = 13/310 (4%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G + ++FTLA+VL  S  + + +   +Q+H   +K +  +  FV ++L+D+Y ++G++ E
Sbjct: 137 GCKANEFTLATVL-TSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQE 195

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D  +  A+I GY       +AL+LF  +++SG + + +T  T + +   
Sbjct: 196 ARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSG 255

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  GKQ+H   ++      + + + ++DMY KCG ++ ++ +F+++P    ++W  M
Sbjct: 256 LASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAM 315

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           + G   +G     + ++  M    V PD  T   ++   S    +++G  I   ++K   
Sbjct: 316 LMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK--- 371

Query: 625 SSDPFVGIS----LVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN---GE 676
             +  + I     ++D+  + G ++ A  L + M    T  +W ++L     H N   GE
Sbjct: 372 EQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGE 431

Query: 677 ETLKLFEDMK 686
              +   DM+
Sbjct: 432 VVAQKLLDME 441



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 160/360 (44%), Gaps = 50/360 (13%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C+    +     VH + +K       +++  L+ +Y + G + +A+ + DGM ER+VV W
Sbjct: 51  CVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSW 110

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGL-------------CPDDESVQCVLGVISDLGK 275
             M+  Y+++G   E   LF+ + R+G              CP  +S+Q V  V S + K
Sbjct: 111 TAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVK 170

Query: 276 RHEEQVQAYAIKLL-LYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIEC 319
            + E        LL +Y  + N+               V     +SGY Q+G +  A++ 
Sbjct: 171 TNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDL 230

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  +  S +Q + VTF   L +++G  +LN G+Q+HG  L+      +++ NSLI+MYSK
Sbjct: 231 FRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSK 290

Query: 380 MGCVCGLRT--DQFTLASVLRASSSL-PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
            G +   R   D     S +  ++ L   G H   Q  V   +  T      S  L+ V 
Sbjct: 291 CGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVL 350

Query: 437 --CRNGSMAEAEYLFENKDGFDLAT--WNAMI----FGYIL-----SNNSHKALELFSHM 483
             C +G + +     E  D FDL     NA+I    +G ++     S    KAL+L  HM
Sbjct: 351 SGCSHGGLVD-----EGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHM 405


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 220/686 (32%), Positives = 335/686 (48%), Gaps = 81/686 (11%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           +YA+ L     N N V+WN  + G         A+E +V+MI S  + +  TF     + 
Sbjct: 79  SYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSC 138

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
                 + G+Q+H   LK G      V  SLINMY++ G +   R               
Sbjct: 139 TKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARL-------------- 184

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                              ++ D+   TALI  Y   G + EA  LF+     D+ +WNA
Sbjct: 185 --------------VFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNA 230

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC---GCLLMLKQGKQMHAYAM 519
           MI GY  S    +A+  F  M  +    +  T+ + + AC   G  L L  G  + ++  
Sbjct: 231 MISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL--GNWVRSWIE 288

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             G   ++ + +G++DMYVKCG + +A ++F  I   + V+W  MI G         AL 
Sbjct: 289 DRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALG 348

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDM 637
           ++ +M  S + P++ TF  ++ A + L AL+ G+ +HA + K   S    V +  SL+DM
Sbjct: 349 LFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDM 408

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           YAKCG++  A  +F  M+ ++   WNAM+ G A HG+ +  L LF  M + G  PD +TF
Sbjct: 409 YAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITF 468

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +GVL+AC + GL+S     F  M + Y + P++ HY  ++D  GRAG   EA  L+ +M 
Sbjct: 469 VGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNME 528

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            +   ++  +LLGACR+    E  + VA+ L  LEP + SAYVLLSNI+A A +W+DV  
Sbjct: 529 MKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAK 588

Query: 818 ARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPD 854
            R  +    +KK P                       ++ I+  ++ +  R+++ G+VPD
Sbjct: 589 IRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPD 648

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------------- 893
           T  VL D++EE KE  L +HSEKLA A+GLIST P + I                     
Sbjct: 649 TSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISK 708

Query: 894 LSNKEPLY--ANRFHHLRDGMCPCAD 917
           + N+E +    NRFHH +DG C C D
Sbjct: 709 IFNREIIARDRNRFHHFKDGSCSCKD 734



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 196/411 (47%), Gaps = 38/411 (9%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAM 463
           L   KQIH   IK       F  + LI+ +C    +G ++ A  LF+     +   WN M
Sbjct: 41  LQTLKQIHSQIIKTGLHNTHFALSKLIE-FCAVSPHGDLSYALSLFKTIRNPNHVIWNHM 99

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I G   S +   ALE + HM +SG   +E T  +  K+C  +    +GKQ+HA+ +K G 
Sbjct: 100 IRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGL 159

Query: 524 ELDLCVSSGILDMYVKCGAMV-------------------------------DAQSIFND 552
           E +  V + +++MY + G +V                               +A+ +F++
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT-FAILVKASSCLTALEQ 611
           IP  D V+W  MISG   +G  + A++ + +MR + V P+  T  ++L   +   ++L+ 
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G  + + +      S+  +   L+DMY KCG++E+A  LF+++  +N V WN M+ G   
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS-EAYENFHLMREKYGIEPEV 730
               +E L LF  M    ++P+ VTF+ +L AC+  G +    + + ++ +    ++  V
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
             ++ L+D   + G    A  +   M  ++ A+ + A++    + G T+T 
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWN-AMISGFAMHGHTDTA 449



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 178/398 (44%), Gaps = 39/398 (9%)

Query: 72  GKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G+  +AR + + S + D      L+T Y+  G L  AR LFD++P RD++SWN++++ YA
Sbjct: 177 GELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYA 236

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY-VWASETVHGYALKIG 189
            SG      V E    F  +R +    +  T+  +L  C  SG  +     V  +    G
Sbjct: 237 QSGR-----VEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRG 291

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  +  +   L+++Y K G + EA  LF+ +Q+++VV W VM+  Y      +E   LF 
Sbjct: 292 LGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFR 351

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
            + +S + P+D +   +L   ++LG     + V AY  K +    N+ V LW   +  Y 
Sbjct: 352 RMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNT-VALWTSLIDMYA 410

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + GD   A   F  M   N +           ++A  + +  G  +HG T          
Sbjct: 411 KCGDLAVAKRIFDCM---NTK-----------SLATWNAMISGFAMHGHT---------- 446

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
             ++ + ++S+M    G   D  T   VL A       L L ++     I++  V+    
Sbjct: 447 --DTALGLFSRMTSE-GFVPDDITFVGVLTACKH-AGLLSLGRRYFSSMIQDYKVSPKLP 502

Query: 429 STA-LIDVYCRNGSMAEAEYLFENKD-GFDLATWNAMI 464
               +ID++ R G   EAE L +N +   D A W +++
Sbjct: 503 HYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLL 540



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 152/374 (40%), Gaps = 70/374 (18%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  H++I+ +      F  + L+     S  G L YA  LF  + + + + WN ++    
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMI---- 100

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G  ++E+       +  +  S T  +  T   + K C         + VH + LK+GL
Sbjct: 101 -RGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGL 159

Query: 191 VWDEFVSGALVNIYSKFGK-------------------------------IREAKFLFDG 219
             + FV  +L+N+Y++ G+                               + EA+ LFD 
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK---- 275
           +  RDVV W  M+  YA++G  EE    F ++ R+ + P+  ++  VL   +  G     
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279

Query: 276 ----RHEEQVQAYAIKLLLYN----------------------NNSNVVLWNKKLSGYLQ 309
               R   + +     + L N                       + NVV WN  + GY  
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS--GFYSAV 367
           +     A+  F  M++SN+  + VTFL  L A A    L+LG+ +H    K+     + V
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399

Query: 368 IVGNSLINMYSKMG 381
            +  SLI+MY+K G
Sbjct: 400 ALWTSLIDMYAKCG 413



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC--GNIEDAYILFKQMDMRNTV 660
           S+C T L+  +QIH+ +IK    +  F    L++  A    G++  A  LFK +   N V
Sbjct: 36  SNCKT-LQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHV 94

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           +WN M+ GL+   +    L+ +  M + G EP+  TF  +  +C+      E  +  H  
Sbjct: 95  IWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEG-KQVHAH 153

Query: 721 REKYGIEPEVEHYSFLVDALGRAG 744
             K G+E     ++ L++   + G
Sbjct: 154 VLKLGLEHNAFVHTSLINMYAQNG 177


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 230/703 (32%), Positives = 339/703 (48%), Gaps = 109/703 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           + V W   + G  + G    AI+  ++M          T    L++ A T    +G+++H
Sbjct: 22  DAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVH 81

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
              +K G  S V V NS++NMY K G       D  T  +V              +++ V
Sbjct: 82  SFVVKLGLGSCVPVANSVLNMYGKCG-------DSETATTVF-------------ERMPV 121

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            ++ +          A++ +    G M  AE LFE+     + +WNAMI GY  +    K
Sbjct: 122 RSVSS--------WNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAK 173

Query: 476 ALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM--------------- 519
           AL+LFS M H S    DE TI + + AC  L  ++ GKQ+HAY +               
Sbjct: 174 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 233

Query: 520 ----KSG------------FELDLCVSS--GILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
               KSG             E DL V S   +L+ YVK G M  A+ +F  +   D VAW
Sbjct: 234 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 293

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T MI G   NG  D A+ ++  M   G  P+ +T A ++   + L  L+ G+QIH   I+
Sbjct: 294 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIR 353

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN-TVLWNAMLVGLAQHGNGEETLK 680
                   V  +++ MYA+ G+   A  +F Q+  R  T+ W +M+V LAQHG GEE + 
Sbjct: 354 SLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVG 413

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           LFE+M   GVEPD +T++GVLSACS+ G V+E    +  ++ ++ I PE+ HY+ +VD L
Sbjct: 414 LFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLL 473

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
            RAG   EA E I  MP E  A    +LL ACRV  + E  +  AEKL++++P +S AY 
Sbjct: 474 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS 533

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFA 837
            ++N+++A  +W D        K K V+K+                         D ++A
Sbjct: 534 AIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA 593

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
               + + IK  G+VPD   VL DV++E KE  L  HSEKLA A+GLISTP  + +    
Sbjct: 594 MAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMK 653

Query: 894 -----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                            ++++E +   A RFHH RDG+C C D
Sbjct: 654 NLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKD 696



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 151/336 (44%), Gaps = 65/336 (19%)

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           ++ ++G +A+A  +F      D  +W  M+ G   +    +A++    M   G    + T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG------------- 541
           +   + +C        G+++H++ +K G    + V++ +L+MY KCG             
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 542 --------AMVD----------AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
                   AMV           A+S+F  +P    V+W  MI+G   NG +  AL ++ +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 584 M-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           M   S + PDEFT   ++ A + L  +  G+Q+HA +++ + + +  V  +L+  YAK G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 643 NIEDA-----------------------YI----------LFKQMDMRNTVLWNAMLVGL 669
           ++E+A                       Y+          +F  M+ R+ V W AM+VG 
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            Q+G  +E + LF  M   G EP+S T   VLS C+
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 336



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 208/502 (41%), Gaps = 113/502 (22%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P R ++  N ++++ +  G +  A  LF+ MPDR ++SWN+++A Y  +G        
Sbjct: 118 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLD-----A 172

Query: 142 EGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           +  +LF R L ES       T+  +L  C + G V   + VH Y L+  + ++  V+ AL
Sbjct: 173 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 232

Query: 201 VNIYSKFGKIREAKFLFDGMQERD--VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           ++ Y+K G +  A+ + D   E D  V+ +  +L  Y + G                   
Sbjct: 233 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG------------------- 273

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           D ES + + GV+                      NN +VV W   + GY Q G N  AI+
Sbjct: 274 DMESAREMFGVM----------------------NNRDVVAWTAMIVGYEQNGRNDEAID 311

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F +MI    + +S T    L+  A    L+ G+QIH   ++S    +  V N++I MY+
Sbjct: 312 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 371

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           + G                    S P    +  Q+     + +T+      T++I    +
Sbjct: 372 RSG--------------------SFPWARRMFDQV---CWRKETI----TWTSMIVALAQ 404

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           +G   EA  LFE                                M  +G   D IT    
Sbjct: 405 HGQGEEAVGLFE-------------------------------EMLRAGVEPDRITYVGV 433

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
           + AC     + +GK+ +   +K+  ++  ++   + ++D+  + G   +AQ     +P  
Sbjct: 434 LSACSHAGFVNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE 492

Query: 556 PDDVAWTTMISGCVDNGEEDLA 577
           PD +AW +++S C  +   +LA
Sbjct: 493 PDAIAWGSLLSACRVHKNAELA 514



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 36/281 (12%)

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           M+ K G + DA+ +F ++P  D V+WT M+ G    G    A+     M   G  P +FT
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
              ++ + +   A   GR++H+ ++KL   S   V  S+++MY KCG+ E A  +F++M 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 656 MRNT-------------------------------VLWNAMLVGLAQHGNGEETLKLFED 684
           +R+                                V WNAM+ G  Q+G   + LKLF  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 685 M-KAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGR 742
           M     + PD  T   VLSAC+  G V    + + +++R +     +V +   L+    +
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNA--LISTYAK 238

Query: 743 AGRTKEAGELI-LSMPFEASASMHRALLGACRVQGDTETGK 782
           +G  + A  ++  SM  + +     ALL      GD E+ +
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 279



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 44/264 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK---- 113
           S+L    +  ++ +GK  HA IL +    +  +TN L++ Y++ GS+  ARR+ D+    
Sbjct: 196 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 255

Query: 114 -----------------------------MPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
                                        M +RD+++W +++  Y  +G  +     E  
Sbjct: 256 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND-----EAI 310

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LFRS+       +  TLA +L +C S   +   + +H  A++  L     VS A++ +Y
Sbjct: 311 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMY 370

Query: 205 SKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           ++ G    A+ +FD +   ++ + W  M+ A A++G GEE   LF ++ R+G+ PD  + 
Sbjct: 371 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITY 430

Query: 264 QCVLGVIS-----DLGKRHEEQVQ 282
             VL   S     + GKR+ +Q++
Sbjct: 431 VGVLSACSHAGFVNEGKRYYDQIK 454



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L    S + L  GK  H R + S       ++N ++TMY+R GS  +ARR+FD++  R
Sbjct: 330 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 389

Query: 118 -DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            + I+W S++ A A  G+G      E   LF  +  +     R+T   +L  C  +G+V 
Sbjct: 390 KETITWTSMIVALAQHGQGE-----EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVN 444

Query: 177 ASETVHGYALKIGLVWDEFVSGA-LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             +  +        +  E    A +V++ ++ G   EA+     M  E D + W  +L A
Sbjct: 445 EGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 504


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 190/554 (34%), Positives = 306/554 (55%), Gaps = 47/554 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++ IH H  ++    D+F+  +LI +YC+ G++++A ++F+     D+ +W  +I GY  
Sbjct: 79  ARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQ 138

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +A+ L   M  +  R +  T  + +KA G       G+QMHA A+K  ++ D+ V
Sbjct: 139 NYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYV 198

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S +LDMY +C  M  A  +F+ + + ++V+W  +I+G     + +  L  + +M+ +G 
Sbjct: 199 GSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGF 258

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FT++ +  A + + ALEQGR +HA+LIK       FVG +++ MYAK G++ DA  
Sbjct: 259 GATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARK 318

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F +MD R+ V WN ML  LAQ+G G+E +  FE+++  G++ + +TF+ VL+ACS+ GL
Sbjct: 319 VFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGL 378

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E    F +M++ Y ++PE++HY   VD LGRAG  KEA   +  MP E +A++  ALL
Sbjct: 379 VKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 437

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR+  + + G++ A+ +  L+P D+   VLL NI+A+  +W+D    R  MK   VKK
Sbjct: 438 GACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKK 497

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           +PA                         I+   E +  RIK+ GYVP+T  VLL + E+E
Sbjct: 498 EPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQE 557

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--AN 903
           +E  L YHSEK+A A+ LI+ P  + I                     +  +E +    N
Sbjct: 558 RETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTN 617

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  +G C C D
Sbjct: 618 RFHHFSEGSCSCGD 631



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 123/224 (54%), Gaps = 1/224 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L   + +HA+  +S    D  + + ++ MY KCGA+ DA+ +F+ +P+ D 
Sbjct: 67  IAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDV 126

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WT +I+G   N     A+ +   M  +   P+ FTF  L+KA+        G Q+HA 
Sbjct: 127 VSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHAL 186

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K +   D +VG +L+DMYA+C  ++ A ++F ++  +N V WNA++ G A+  +GE T
Sbjct: 187 AVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETT 246

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMR 721
           L  F +M+ +G      T+  + SA +  G + +  + + HL++
Sbjct: 247 LMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIK 290



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 178/384 (46%), Gaps = 49/384 (12%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------- 384
           +AA A   NL   + IH    +S       + NSLI+MY K G V               
Sbjct: 67  IAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDV 126

Query: 385 --------------------GL---------RTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                               GL         R + FT  S+L+A+ +   G  + +Q+H 
Sbjct: 127 VSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC-GGCSIGEQMHA 185

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            A+K +   D +V +AL+D+Y R   M  A  +F+     +  +WNA+I G+    +   
Sbjct: 186 LAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 245

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
            L  F+ M  +G      T ++   A   +  L+QG+ +HA+ +KSG +L   V + +L 
Sbjct: 246 TLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLG 305

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY K G+MVDA+ +F+ +   D V W TM++     G    A++ + ++R  G+  ++ T
Sbjct: 306 MYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQIT 365

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQ 653
           F  ++ A S    +++G+  + +++K D +  P +   +S VD+  + G +++A I   +
Sbjct: 366 FLSVLTACSHGGLVKEGKH-YFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423

Query: 654 MDMRNT-VLWNAMLVGLAQHGNGE 676
           M M  T  +W A+L     H N +
Sbjct: 424 MPMEPTAAVWGALLGACRMHKNAK 447



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 49/338 (14%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SI+       +L   ++ HA +  S    D FL N+L+ MY +CG++  AR +FDKMP
Sbjct: 63  YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            RD++SW  ++A YA +         E   L   +  +    +  T   LLK   + G  
Sbjct: 123 SRDVVSWTYLIAGYAQN-----YMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGC 177

Query: 176 WASETVHGYALKIGLVWDE--FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
              E +H  A+K    WDE  +V  AL+++Y++  ++  A  +FD +  ++ V W  ++ 
Sbjct: 178 SIGEQMHALAVKYN--WDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAI----KL 288
            +A    GE     F ++ R+G      +   +    + +G   + + V A+ I    KL
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295

Query: 289 LLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
             +  N+                        ++V WN  L+   Q G    A+  F  + 
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 355

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
           +  +Q + +TFL  L A +           HG  +K G
Sbjct: 356 KCGIQLNQITFLSVLTACS-----------HGGLVKEG 382



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 87/395 (22%)

Query: 162 LAPLLKL-------CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
           LAP  +L       C     +  +  +H +  +  L  D F+  +L+++Y K G + +A+
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M  RDVV W  ++  YA+N    E   L  D+ R+   P+  +   +L      G
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 275 K-RHEEQVQAYAIK--------------------------LLLYNN--NSNVVLWNKKLS 305
                EQ+ A A+K                          +++++   + N V WN  ++
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           G+ +  D    +  F  M R+       T+    +A A    L  G+ +H   +KSG   
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295

Query: 366 AVIVGNSLINMYSKMGCV------------------------------------------ 383
              VGN+++ MY+K G +                                          
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 355

Query: 384 -CGLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
            CG++ +Q T  SVL A S    + EG H    +  + ++ +   D +VS   +D+  R 
Sbjct: 356 KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEI--DHYVS--FVDLLGRA 411

Query: 440 GSMAEAE-YLFENKDGFDLATWNAMIFGYILSNNS 473
           G + EA  ++F+       A W A++    +  N+
Sbjct: 412 GLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNA 446



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 1/154 (0%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P    +  ++ A +    L   R IHA+L +   + D F+  SL+ MY KCG + DA 
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F +M  R+ V W  ++ G AQ+    E + L  DM      P+  TF  +L A    G
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             S   E  H +  KY  + +V   S L+D   R
Sbjct: 176 GCSIG-EQMHALAVKYNWDEDVYVGSALLDMYAR 208


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  345 bits (884), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 219/715 (30%), Positives = 358/715 (50%), Gaps = 103/715 (14%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSN----VQYDSVTFLVALAAVAGTDNLNL--G 351
           VL++  L GY +      A+  F   +R +    V YD  T+L+ L+     +NL+L  G
Sbjct: 108 VLYHTMLKGYAKNSTLRDAVR-FYERMRCDEVMPVVYD-FTYLLQLSG----ENLDLRRG 161

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
           ++IHG  + +GF S +    +++N+Y+K   +                            
Sbjct: 162 REIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQN 221

Query: 384 ---------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           G + D  TL SVL A + L + L + + IH +A +        V
Sbjct: 222 GFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADL-KALRIGRSIHGYAFRAGFEYMVNV 280

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +TA++D Y + GS+  A  +F+     ++ +WN MI GY  +  S +A   F  M   G 
Sbjct: 281 ATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGV 340

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
               +++  A+ AC  L  L++G+ +H    +     D+ V + ++ MY KC  +  A S
Sbjct: 341 EPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAAS 400

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F ++     V W  MI G   NG  + AL+++ +M+   + PD FT   ++ A + L+ 
Sbjct: 401 VFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSV 460

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
             Q + IH   I+     + FV  +L+D +AKCG I+ A  LF  M  R+ + WNAM+ G
Sbjct: 461 TRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDG 520

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              +G+G E L LF +M+   V+P+ +TF+ V++ACS++GLV E    F  M+E YG+EP
Sbjct: 521 YGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEP 580

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            ++HY  +VD LGRAGR  +A + I  MP +   ++  A+LGACR+  + E G+  A++L
Sbjct: 581 TMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADEL 640

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------- 831
             L+P D   +VLL+N++A+A+ WD V   R  M++K ++K P                 
Sbjct: 641 FDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSG 700

Query: 832 ------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                 +  I+A +E L   +K  GYVPDT+ +  DVEE+ KE+ L  HSE+LA A+GL+
Sbjct: 701 STNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLL 759

Query: 886 STPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           +T   + I                     ++ +E +  +  RFHH ++G+C C D
Sbjct: 760 NTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGD 814



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 243/558 (43%), Gaps = 84/558 (15%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           +      L++++ +  S+  A R+F+ +  +  + ++++L  YA +       + +  R 
Sbjct: 75  EHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKN-----STLRDAVRF 129

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +  +R             LL+L   +  +     +HG  +  G   + F   A+VN+Y+K
Sbjct: 130 YERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAK 189

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
             +I +A  +F+ M +RD+V W  ++  YA+NGF      + + +  +G  PD  ++  V
Sbjct: 190 CRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSV 249

Query: 267 LGVISDLGK-RHEEQVQAYAIKL--------------------------LLYNNNS--NV 297
           L  ++DL   R    +  YA +                           L++   S  NV
Sbjct: 250 LPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNV 309

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  + GY Q G++  A   F+ M+   V+  +V+ + AL A A   +L  G+ +H  
Sbjct: 310 VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRL 369

Query: 358 TLKSGFYSAVIVGNSLINMYSKM-------------------------------GCV--- 383
             +      V V NSLI+MYSK                                GCV   
Sbjct: 370 LDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEA 429

Query: 384 ----CGLRT-----DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
               C +++     D FTL SV+ A + L      +K IH  AI+     + FV TALID
Sbjct: 430 LNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQ-AKWIHGLAIRTLMDKNVFVCTALID 488

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
            + + G++  A  LF+      + TWNAMI GY  + +  +AL+LF+ M     + +EIT
Sbjct: 489 THAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEIT 548

Query: 495 IATAVKACGCLLMLKQGKQMHAY-AMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFN 551
             + + AC    ++++G  M+ + +MK  + L+  +     ++D+  + G + DA     
Sbjct: 549 FLSVIAACSHSGLVEEG--MYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQ 606

Query: 552 DIPA-PDDVAWTTMISGC 568
           D+P  P       M+  C
Sbjct: 607 DMPVKPGITVLGAMLGAC 624



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 166/335 (49%), Gaps = 14/335 (4%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           A +L   +SL E LH   QI    IKN    +    T LI ++C+  S+ EA  +FE  +
Sbjct: 48  AILLELCTSLKE-LH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVE 103

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT-----IATAVKACGCLLML 508
                 ++ M+ GY  ++    A+  +  M     R DE+          ++  G  L L
Sbjct: 104 HKLDVLYHTMLKGYAKNSTLRDAVRFYERM-----RCDEVMPVVYDFTYLLQLSGENLDL 158

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           ++G+++H   + +GF+ +L   + ++++Y KC  + DA  +F  +P  D V+W T+++G 
Sbjct: 159 RRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGY 218

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG    A+ +  QM+ +G  PD  T   ++ A + L AL  GR IH    +       
Sbjct: 219 AQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMV 278

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +++D Y KCG++  A ++FK M  RN V WN M+ G AQ+G  EE    F  M   
Sbjct: 279 NVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDE 338

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           GVEP +V+ +G L AC+  G +        L+ EK
Sbjct: 339 GVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 34/331 (10%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           LQ         S    S+L        L +G+S H     +       +   ++  Y +C
Sbjct: 232 LQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKC 291

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           GS+  AR +F  M  R+++SWN+++  YA +GE       E F  F  + +     + ++
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESE-----EAFATFLKMLDEGVEPTNVS 346

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +   L  C + G +     VH    +  + +D  V  +L+++YSK  ++  A  +F  ++
Sbjct: 347 MMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLK 406

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQ 280
            + VV W  M+  YA+NG   E  +LF ++    + PD  ++  V+  ++DL   R  + 
Sbjct: 407 HKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKW 466

Query: 281 VQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVGD 312
           +   AI+ L+  N                              +V+ WN  + GY   G 
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGH 526

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
              A++ F  M   +V+ + +TFL  +AA +
Sbjct: 527 GREALDLFNEMQNGSVKPNEITFLSVIAACS 557



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 7/208 (3%)

Query: 68  DLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           DL  G+  H R+L+  +I  D  + N+L++MYS+C  +  A  +F  +  + +++WN+++
Sbjct: 359 DLERGRYVH-RLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMI 417

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             YA +G      V E   LF  ++         TL  ++           ++ +HG A+
Sbjct: 418 LGYAQNG-----CVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAI 472

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           +  +  + FV  AL++ ++K G I+ A+ LFD MQER V+ W  M+  Y  NG G E   
Sbjct: 473 RTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALD 532

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG 274
           LF ++    + P++ +   V+   S  G
Sbjct: 533 LFNEMQNGSVKPNEITFLSVIAACSHSG 560


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  345 bits (884), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 244/756 (32%), Positives = 368/756 (48%), Gaps = 127/756 (16%)

Query: 273 LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQY- 330
           L +  + Q+Q    K LL   +S++  WN  +S Y++ G  + A+  F  M R S+V Y 
Sbjct: 40  LKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN 99

Query: 331 -------------------------DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
                                    D V++ V +       NL   +++     +     
Sbjct: 100 GMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD--- 156

Query: 366 AVIVGNSLINMYSKMGCVCGLRT--DQF---------TLASVLRASSSLPEGLHLSKQIH 414
            V   N++++ Y++ GCV   R+  D+           L S    +S + E   L K   
Sbjct: 157 -VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215

Query: 415 VHA-----------IKNDTVADS---FVSTALIDV---------YCRNGSMAEAEYLFEN 451
             A           +K   + ++   F S  + DV         Y ++G + EA  LF+ 
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D+ TW AM+ GYI +    +A ELF  M    E      +A  V          QG
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV----------QG 325

Query: 512 KQMHAYAMKSGFELDLCVS----SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           ++M     K  F++  C +    + ++  Y +CG + +A+++F+ +P  D V+W  MI+G
Sbjct: 326 ERMEM--AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G    AL ++ QM   G   +  +F+  +   + + ALE G+Q+H  L+K    + 
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FVG +L+ MY KCG+IE+A  LFK+M  ++ V WN M+ G ++HG GE  L+ FE MK 
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G++PD  T + VLSACS+TGLV +  + F+ M + YG+ P  +HY+ +VD LGRAG  +
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           +A  L+ +MPFE  A++   LLGA RV G+TE  +  A+K+ A+EP +S  YVLLSN++A
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623

Query: 808 AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
           ++ +W DV   R  M+ K VKK P                        D IFA +E L  
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI---STPPSSVILS------ 895
           R+K+ GYV  T  VL DVEEEEKER + YHSE+LA AYG++   S  P  VI +      
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743

Query: 896 --NKEPLYA------------NRFHHLRDGMCPCAD 917
             N     A            NRFHH +DG C C D
Sbjct: 744 CHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGD 779



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 168/624 (26%), Positives = 276/624 (44%), Gaps = 86/624 (13%)

Query: 71  LGKSTHARILNSSQIP-------DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           L ++T  +I  S   P       D    N  ++ Y R G    A R+F +MP    +S+N
Sbjct: 40  LKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN 99

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW------A 177
            +++ Y  +GE         F L R L + +     ++   ++K     GYV       A
Sbjct: 100 GMISGYLRNGE---------FELARKLFDEMPERDLVSWNVMIK-----GYVRNRNLGKA 145

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E       +    W+  +SG     Y++ G + +A+ +FD M E++ V W  +L AY +
Sbjct: 146 RELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           N   EE   LF       L     S  C+LG      K  E      A +     N  +V
Sbjct: 201 NSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVE------ARQFFDSMNVRDV 250

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  ++GY Q G    A + F     S VQ D  T+                     T
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLF---DESPVQ-DVFTW---------------------T 285

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            + SG+    +V  +   ++ KM        ++ +  ++L A     E + ++K++    
Sbjct: 286 AMVSGYIQNRMVEEAR-ELFDKMP-----ERNEVSWNAML-AGYVQGERMEMAKELF--- 335

Query: 418 IKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
              D +    VST   +I  Y + G ++EA+ LF+     D  +W AMI GY  S +S +
Sbjct: 336 ---DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL LF  M   G RL+  + ++A+  C  ++ L+ GKQ+H   +K G+E    V + +L 
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG++ +A  +F ++   D V+W TMI+G   +G  ++AL  +  M+  G+ PD+ T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQ 653
              ++ A S    +++GRQ    + + D    P       +VD+  + G +EDA+ L K 
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQ-DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571

Query: 654 MDMR-NTVLWNAMLVGLAQHGNGE 676
           M    +  +W  +L     HGN E
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTE 595



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 241/537 (44%), Gaps = 45/537 (8%)

Query: 55  QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFD 112
           +W S+  + + +  L  G+   AR L   ++P+R L   N ++  Y R  +L  AR LF+
Sbjct: 92  RWSSVSYNGMISGYLRNGEFELARKL-FDEMPERDLVSWNVMIKGYVRNRNLGKARELFE 150

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            MP+RD+ SWN++L+ YA +G      V +   +F  + E    +    L+  ++     
Sbjct: 151 IMPERDVCSWNTMLSGYAQNG-----CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKME 205

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                 ++   +AL   + W+  + G     + K  KI EA+  FD M  RDVV W  ++
Sbjct: 206 EACMLFKSRENWAL---VSWNCLLGG-----FVKKKKIVEARQFFDSMNVRDVVSWNTII 257

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
             YA++G  +E   LF          D+  VQ V    + +    + ++   A +L    
Sbjct: 258 TGYAQSGKIDEARQLF----------DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              N V WN  L+GY+Q      A E F  M   NV     T+   +   A    ++  +
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAK 363

Query: 353 QIHGTTLKSG--FYSAVIVGNS-------LINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     K     ++A+I G S        + ++ +M    G R ++ + +S L   + +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADV 422

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L L KQ+H   +K       FV  AL+ +YC+ GS+ EA  LF+   G D+ +WN M
Sbjct: 423 V-ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY        AL  F  M   G + D+ T+   + AC    ++ +G+Q + Y M   +
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YFYTMTQDY 540

Query: 524 EL--DLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            +  +    + ++D+  + G + DA ++  ++P  PD   W T++     +G  +LA
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 7/208 (3%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F+Q        + S + S L        L LGK  H R++        F+ N L+ 
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CGS+  A  LF +M  +D++SWN+++A Y+  G G         R F S++     
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV-----ALRFFESMKREGLK 507

Query: 157 TSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
               T+  +L  C  +G V    +  +      G++ +      +V++  + G + +A  
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567

Query: 216 LFDGMQ-ERDVVLWKVMLRAYAENGFGE 242
           L   M  E D  +W  +L A   +G  E
Sbjct: 568 LMKNMPFEPDAAIWGTLLGASRVHGNTE 595


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 193/559 (34%), Positives = 306/559 (54%), Gaps = 47/559 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + L  ++++H H   +    D+F+  +LI +YC+ GS+ EA  +F+     D+ +W ++I
Sbjct: 65  KNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLI 124

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  ++   +A+ L   M     + +  T A+ +KA G       G+Q+HA A+K  + 
Sbjct: 125 AGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWH 184

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D+ V S +LDMY +CG M  A ++F+ + + + V+W  +ISG    G+ + AL  + +M
Sbjct: 185 EDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEM 244

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
             +G     FT++ +  + + L ALEQG+ +HA++IK       F G +L+DMYAK G++
Sbjct: 245 LRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSM 304

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            DA  +F ++D ++ V WN ML   AQ+G G+E +  FE+M+  G+  + VTF+ +L+AC
Sbjct: 305 IDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTAC 364

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV E    F +M+E Y +EPE++H+  +V  LGRAG    A   I  MP E +A++
Sbjct: 365 SHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAV 423

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             ALL ACR+  + + G++ A+ +  L+P DS   VLL NI+A+  QWD     R  MK 
Sbjct: 424 WGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKT 483

Query: 825 KNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
             VKK+P                       A+ I+     + K+I++ GYVPD D+VLL 
Sbjct: 484 TGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLR 543

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPL 900
           V+++E+E  L YHSEKLA A+ LI  P  + I                     +  +E +
Sbjct: 544 VDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIV 603

Query: 901 Y--ANRFHHLRDGMCPCAD 917
               NRFHH  +G C CAD
Sbjct: 604 VRDTNRFHHFSNGSCSCAD 622



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 131/228 (57%), Gaps = 1/228 (0%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T + AC     L+  +++HA+   S F  D  + + ++ +Y KCG++++A+ +F+++   
Sbjct: 56  TFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRK 115

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+WT++I+G   N   + A+ +   M      P+ FTFA L+KA+        GRQIH
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIH 175

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A  +K D   D +VG +L+DMYA+CG ++ A  +F ++D +N V WNA++ G A+ G+GE
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREK 723
             L  F +M  +G E    T+  V S+ +  G + +  + + H+++ +
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSR 283



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 140/263 (53%), Gaps = 12/263 (4%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           ++P  ++ LLP + K  F  +  +  + S+L+ A + +D  +G+  HA  +      D +
Sbjct: 131 DMPEEAIGLLPGMLKGRFKPNGFT--FASLLKAAGAHADSGIGRQIHALAVKCDWHEDVY 188

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ MY+RCG +  A  +FDK+  ++ +SWN++++ +A  G+G    +T    + R+
Sbjct: 189 VGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFA-EMLRN 247

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             E+  FT     + + +L    G +   + VH + +K       F    L+++Y+K G 
Sbjct: 248 GFEATHFTYSSVFSSIARL----GALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGS 303

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-- 267
           + +A+ +FD + ++D+V W  ML A+A+ G G+E    F ++ +SG+  +  +  C+L  
Sbjct: 304 MIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTA 363

Query: 268 ---GVISDLGKRHEEQVQAYAIK 287
              G +   GKR+ E ++ Y ++
Sbjct: 364 CSHGGLVKEGKRYFEMMKEYDLE 386



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 45/320 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            +  HA + +S    D FL N+L+ +Y +CGS++ AR++FD+M  +D++SW S++A YA 
Sbjct: 70  ARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQ 129

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     +   E   L   + +     +  T A LLK   +         +H  A+K    
Sbjct: 130 N-----DMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWH 184

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  AL+++Y++ G +  A  +FD +  ++ V W  ++  +A  G GE     F ++
Sbjct: 185 EDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEM 244

Query: 252 HRSGLCPDDESVQCVLGVISDLGK------------RHEEQVQAYAIKLLL--------- 290
            R+G      +   V   I+ LG             +  +++ A+A   LL         
Sbjct: 245 LRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSM 304

Query: 291 --------YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                     ++ ++V WN  L+ + Q G    A+  F  M +S +  + VTFL  L A 
Sbjct: 305 IDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTAC 364

Query: 343 AGTDNLNLGQQIHGTTLKSG 362
           +           HG  +K G
Sbjct: 365 S-----------HGGLVKEG 373



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 138/333 (41%), Gaps = 44/333 (13%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            +  C  S  +  +  VH +        D F+  +L+++Y K G + EA+ +FD M+ +D
Sbjct: 57  FITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKD 116

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQV 281
           +V W  ++  YA+N   EE   L   + +    P+  +   +L   G  +D G     Q+
Sbjct: 117 MVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGI--GRQI 174

Query: 282 QAYAIK-------------LLLYN---------------NNSNVVLWNKKLSGYLQVGDN 313
            A A+K             L +Y                ++ N V WN  +SG+ + GD 
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M+R+  +    T+    +++A    L  G+ +H   +KS        GN+L
Sbjct: 235 ETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTL 294

Query: 374 INMYSKMGCVCGLR--------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           ++MY+K G +   R         D  T  ++L A +    GL      H   ++   +  
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQY--GLGKEAVSHFEEMRKSGIYL 352

Query: 426 SFVSTALIDVYCRNGSMA-EAEYLFENKDGFDL 457
           + V+   I   C +G +  E +  FE    +DL
Sbjct: 353 NQVTFLCILTACSHGGLVKEGKRYFEMMKEYDL 385



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 31/259 (11%)

Query: 19  IFSSFTK--DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           + S F +  D    L +F+  L    + +HF+ SS  S   SI R       L  GK  H
Sbjct: 224 LISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFS---SIAR----LGALEQGKWVH 276

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           A ++ S Q    F  N L+ MY++ GS++ AR++FD++ D+DL++WN++L A+A  G G 
Sbjct: 277 AHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGK 336

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS----ETVHGYALKIGLVW 192
                E    F  +R+S  + +++T   +L  C   G V       E +  Y L+  +  
Sbjct: 337 -----EAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEI-- 389

Query: 193 DEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML---RAYAENGFGEEVFHLF 248
           D FV+  +V +  + G +  A  F+F    E    +W  +L   R +     G+     F
Sbjct: 390 DHFVT--VVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQ-----F 442

Query: 249 VDLHRSGLCPDDESVQCVL 267
              H   L PDD     +L
Sbjct: 443 AADHVFELDPDDSGPPVLL 461



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 2/193 (1%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P    +   + A +    LE  R++HA+L     + D F+  SL+ +Y KCG++ +A 
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F +M  ++ V W +++ G AQ+   EE + L   M     +P+  TF  +L A     
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAG-AH 165

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
             S      H +  K     +V   S L+D   R G    A  +   +  +   S +  +
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225

Query: 769 LGACRVQGDTETG 781
            G  R +GD ET 
Sbjct: 226 SGFAR-KGDGETA 237


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 212/602 (35%), Positives = 315/602 (52%), Gaps = 56/602 (9%)

Query: 370 GNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           GN L  + ++SKMG + G++ + FT ++ L+A   L  GL + +QIH   +K      + 
Sbjct: 52  GNPLESLLLFSKMG-LSGVKPNDFTFSTNLKACG-LLNGLDIGRQIHDICVKTGFDMVNV 109

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  ++ID+Y + G + EA  +FE     +L +WNAMI GY ++    KAL LF  M   G
Sbjct: 110 VGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVG 169

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVD 545
             LDE T  + +KAC  L  +K+G Q+HA+ +  GF   ++  V+  ++D+YVKCG +  
Sbjct: 170 GFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFM 229

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+ +F+ I     ++WT +I G    G    ++ ++ Q+R S +  D F  + ++   + 
Sbjct: 230 ARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFAD 289

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
              ++QG+Q+HA  IK+    D  V  S++DMY KCG I +A  LF +M  RN + W  M
Sbjct: 290 FALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVM 349

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G  +HG G+E ++LF++M+    EPD VT++ VL  CS++GLV +  E F  +   +G
Sbjct: 350 ITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHG 409

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I+  VEHY+ +VD LGRAGR KEA  L+ SMP EA+  + + LL ACRV GD E GK V 
Sbjct: 410 IKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVG 469

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK---------------- 829
             L+ L+  +   YV++SNI+A A  W +    R  +K K +KK                
Sbjct: 470 GILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFF 529

Query: 830 ---DPADLIFAKVEGLIK----RIKEG-GYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
              D    +  K+  ++K    R+KE  GYV    + L DVEEE K   L  HSEKLA  
Sbjct: 530 YGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIG 589

Query: 882 YGLIS---TPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
             L+         VI   K                           ANRFH   DG+C C
Sbjct: 590 LALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSC 649

Query: 916 AD 917
            D
Sbjct: 650 RD 651



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 180/335 (53%), Gaps = 3/335 (0%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  +S  LI +Y + G +  A  +F+     ++ +W A++ G+I + N  ++L LFS M 
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
            SG + ++ T +T +KACG L  L  G+Q+H   +K+GF++   V + I+DMY KCG + 
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           +A  +F  +P  + ++W  MI+G    G  + AL ++ +M+  G   DEFTF   +KA S
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185

Query: 605 CLTALEQGRQIHANLIK--LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            L A+++G QIHA LI      S +  V  +L+D+Y KCG +  A  +F  ++ ++ + W
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
            A+++G AQ GN  E+++LF  ++   ++ D      ++   +   LV +  +  H    
Sbjct: 246 TALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG-KQMHAFAI 304

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           K     ++   + ++D   + G   EA  L   MP
Sbjct: 305 KVPSGVDISVCNSILDMYLKCGMINEAERLFSEMP 339



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 110/192 (57%)

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           GF  DL +S+ ++ MY KCG +  A  +F+ +   + V+WT ++ G + NG    +L ++
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
            +M LSGV P++FTF+  +KA   L  L+ GRQIH   +K        VG S++DMY+KC
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G I +A  +F+ M +RN + WNAM+ G    G  E+ L LF+ M+  G   D  TF   L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 702 SACSYTGLVSEA 713
            ACS  G + E 
Sbjct: 182 KACSDLGAIKEG 193



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 216/532 (40%), Gaps = 107/532 (20%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D  L+N+L+ MY +CG L  A  +FD+M  R+++SW +++  +  +G     N  E   L
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNG-----NPLESLLL 60

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +  S    +  T +  LK C     +     +H   +K G      V  +++++YSK
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G+I EA  +F+ M  R+++ W  M+  Y   GF E+   LF  +   G   D+ +    
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 267 LGVISDLGKRHE-EQVQAYAIK-LLLYNNNS----------------------------- 295
           L   SDLG   E  Q+ A+ I    LY+ N+                             
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V+ W   + GY Q G+   ++E F  +  S++Q D       +   A    +  G+Q+H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
              +K      + V NS+++MY K    CG+      +    R  S +P           
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLK----CGM------INEAERLFSEMP----------- 339

Query: 416 HAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
                   A + +S T +I  Y ++G   E                              
Sbjct: 340 --------ARNVISWTVMITGYGKHGLGKE------------------------------ 361

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCV 529
            A+ LF  M       D++T    +  C    ++++G++  +     + +K+  E   C 
Sbjct: 362 -AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC- 419

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSI 580
              ++D+  + G + +A+++ + +P   +V  W T++S C  +G+ +L   +
Sbjct: 420 ---MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEV 468



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 22/191 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA  +      D  + N+++ MY +CG +  A RLF +MP R++ISW  ++  Y  
Sbjct: 296 GKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGK 355

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE-------TVHGY 184
            G G      E  RLF  ++   T    +T   +L  C  SG V   +       + HG 
Sbjct: 356 HGLGK-----EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGI 410

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGF 240
             ++    + +    +V++  + G+++EAK L D M  E +V +W+ +L   R + +   
Sbjct: 411 KARV----EHY--ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLEL 464

Query: 241 GEEVFHLFVDL 251
           G+EV  + + L
Sbjct: 465 GKEVGGILLRL 475


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/560 (35%), Positives = 304/560 (54%), Gaps = 51/560 (9%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L+  K IH   + +    D  +   L+++Y + G +  A  LF+     D+ TW A+I G
Sbjct: 31  LNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITG 90

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKAC---GCLLMLKQGKQMHAYAMKSGF 523
           Y   +    AL L   M   G + ++ T+A+ +KA    G   +L QG+Q+H   ++ G+
Sbjct: 91  YSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVL-QGRQLHGLCLRYGY 149

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           + ++ VS  ILDMY +C  + +AQ IF+ + + ++V+W  +I+G    G+ D A  ++  
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSN 209

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M    V P  FT++ ++ A + + +LEQG+ +HA +IK       FVG +L+DMYAK G+
Sbjct: 210 MLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGS 269

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           IEDA  +F ++  R+ V WN+ML G +QHG G+  L+ FE+M    + P+ +TF+ VL+A
Sbjct: 270 IEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ GL+ E    F +M+ KY +EP++ HY  +VD LGRAG    A + I  MP + +A+
Sbjct: 330 CSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAA 388

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +  ALLGACR+  + E G + AE +  L+      +VLL NI+A A +W+D    R  MK
Sbjct: 389 VWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMK 448

Query: 824 RKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
              VKK+PA                         I    E +  +IKE GYVPD+  VLL
Sbjct: 449 ESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLL 508

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEP 899
            ++++E+E  L YHSEKLA A+ L++TPP S I                     L  +E 
Sbjct: 509 CMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREI 568

Query: 900 LY--ANRFHHLRDGMCPCAD 917
           +    NRFHH  DG C C D
Sbjct: 569 IVRDTNRFHHFCDGACSCED 588



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 183/376 (48%), Gaps = 45/376 (11%)

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------------- 384
           + LN G+ IH   L S F   +++ N+L+N+Y+K G +                      
Sbjct: 29  NKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALI 88

Query: 385 ----------------------GLRTDQFTLASVLRASSSLPEGLHLS-KQIHVHAIKND 421
                                 GL+ +QFTLAS+L+A+S +     L  +Q+H   ++  
Sbjct: 89  TGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYG 148

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
             ++ +VS A++D+Y R   + EA+ +F+     +  +WNA+I GY       KA  LFS
Sbjct: 149 YDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFS 208

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
           +M     +    T ++ + AC  +  L+QGK +HA  +K G +L   V + +LDMY K G
Sbjct: 209 NMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSG 268

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
           ++ DA+ +F+ +   D V+W +M++G   +G   +AL  + +M  + + P++ TF  ++ 
Sbjct: 269 SIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLT 328

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-V 660
           A S    L++GR     + K +        +++VD+  + G+++ A     +M ++ T  
Sbjct: 329 ACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAA 388

Query: 661 LWNAMLVGLAQHGNGE 676
           +W A+L     H N E
Sbjct: 389 VWGALLGACRMHKNME 404



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 149/258 (57%), Gaps = 3/258 (1%)

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T +K C  L  L +GK +HA  + S F  DL + + +L++Y KCG +V A+ +F+++ + 
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL--TALEQGRQ 614
           D V WT +I+G   +     AL +  +M   G+ P++FT A L+KA+S +  T + QGRQ
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H   ++    S+ +V  +++DMYA+C ++E+A ++F  M  +N V WNA++ G A+ G 
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G++   LF +M    V+P   T+  VL AC+  G + +  +  H +  K+G +      +
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQG-KWVHALMIKWGEKLVAFVGN 258

Query: 735 FLVDALGRAGRTKEAGEL 752
            L+D   ++G  ++A ++
Sbjct: 259 TLLDMYAKSGSIEDAKKV 276



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 157/327 (48%), Gaps = 36/327 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+     + L  GK  HA +LNS    D  + N L+ +Y++CG LVYAR+LFD+M  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC--LSSGYV 175
           D+++W +++  Y+       +   +   L   +       ++ TLA LLK    + S  V
Sbjct: 80  DVVTWTALITGYSQH-----DRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDV 134

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +HG  L+ G   + +VS A++++Y++   + EA+ +FD M  ++ V W  ++  Y
Sbjct: 135 LQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGY 194

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI----KLLL 290
           A  G G++ F LF ++ R  + P   +   VL   + +G   + + V A  I    KL+ 
Sbjct: 195 ARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVA 254

Query: 291 YNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           +  N+                        +VV WN  L+GY Q G    A++ F  M+R+
Sbjct: 255 FVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRT 314

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +  + +TFL  L A +    L+ G+ 
Sbjct: 315 RIAPNDITFLCVLTACSHAGLLDEGRH 341



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 141/264 (53%), Gaps = 16/264 (6%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHA--ISTSDLLLGKSTHARILNSSQIPDRF 89
           P  +L LLP + +     +  +    S+L+ A  + ++D+L G+  H   L      + +
Sbjct: 97  PQDALLLLPEMLRIGLKPNQFTLA--SLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVY 154

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           ++  ++ MY+RC  L  A+ +FD M  ++ +SWN+++A YA  G+G+     + F LF +
Sbjct: 155 VSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGD-----KAFCLFSN 209

Query: 150 -LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            LRE++  T   T + +L  C S G +   + VH   +K G     FV   L+++Y+K G
Sbjct: 210 MLRENVKPT-HFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSG 268

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            I +AK +FD + +RDVV W  ML  Y+++G G+     F ++ R+ + P+D +  CVL 
Sbjct: 269 SIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLT 328

Query: 269 VIS-----DLGKRHEEQVQAYAIK 287
             S     D G+ + + ++ Y ++
Sbjct: 329 ACSHAGLLDEGRHYFDMMKKYNVE 352



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 31/257 (12%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           +R     LLK C     +   + +H   L      D  +   L+N+Y+K G +  A+ LF
Sbjct: 14  AREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLF 73

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           D M  RDVV W  ++  Y+++   ++   L  ++ R GL P+  ++  +L   S +G   
Sbjct: 74  DEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTD 133

Query: 278 EEQVQAYAIKLLLYNNNSNV-------------------------------VLWNKKLSG 306
             Q +      L Y  +SNV                               V WN  ++G
Sbjct: 134 VLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAG 193

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y + G    A   F NM+R NV+    T+   L A A   +L  G+ +H   +K G    
Sbjct: 194 YARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLV 253

Query: 367 VIVGNSLINMYSKMGCV 383
             VGN+L++MY+K G +
Sbjct: 254 AFVGNTLLDMYAKSGSI 270


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 192/537 (35%), Positives = 299/537 (55%), Gaps = 51/537 (9%)

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F+   LI++Y + G + +A+ +F+     ++ +W  MI  Y  +  + KALE    M   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G R +  T ++ ++AC  L  L+Q   +H   +K G + D+ V S ++D+Y + G + +A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
             +F+++   D V W+++I+G   N + D AL ++ +M+ +G +  + T   +++A + L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
             LE GRQ+H +++K D   D  +  +L+DMY KCG++EDA  +F +M  ++ + W+ M+
Sbjct: 178 ALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
            GLAQ+G  +E LKLFE MK  G++P+ VT +GVL ACS+ GLV E    FH M+E +GI
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
           +P  EHY  ++D LGRAGR  EA +LI  M  E  A   RALL ACRV  + +     A+
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAK 355

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------ADLIFAKV 839
           +++ L+P D+  YVLLSNI+A   +W+DV   R  M  + +KK+P       +  I A +
Sbjct: 356 QILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFI 415

Query: 840 EG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
            G                LI ++   GYVPDT+FVL D+E E+ + +L YHSEKLA  +G
Sbjct: 416 LGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFG 475

Query: 884 LISTPPSSVILSNKE-----------PLYAN------------RFHHLRDGMCPCAD 917
           L+S P    I   K             L A             R+HH +DG+C C D
Sbjct: 476 LMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGD 532



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 162/294 (55%), Gaps = 12/294 (4%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+R + FT +SVLRA     +GL   +Q+H   IK    +D FV +ALIDVY R G +  
Sbjct: 61  GVRPNMFTYSSVLRAC----DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     DL  W+++I G+  +++  +AL LF  M  +G    + T+ + ++AC  
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L +L+ G+Q+H + +K  ++ DL +++ +LDMY KCG++ DA ++F  +   D ++W+TM
Sbjct: 177 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQIHA--NLIK 621
           I+G   NG    AL ++  M++ G+ P+  T   ++ A S    +E+G    H+   L  
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           +D   + +    ++D+  + G + +A  L  +M+   + V W A+L     H N
Sbjct: 295 IDPGREHYG--CMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRN 346



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 56/418 (13%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FL N L+ MY + G L  A+ +FDKMPDR+++SW ++++AY  S     +   E   L  
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAY--SAAKLNDKALEFLVLM- 57

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            LRE +   +  T + +L+ C     ++    +H   +KIGL  D FV  AL+++YS++G
Sbjct: 58  -LREGVR-PNMFTYSSVLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWG 112

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           ++  A  +FD M   D+V+W  ++  +A+N  G+E   LF  + R+G      ++  VL 
Sbjct: 113 ELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLR 172

Query: 269 VISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
             + L       QV  + +K      + +++L N  L  Y + G    A   FV M    
Sbjct: 173 ACTGLALLELGRQVHVHVLKY-----DQDLILNNALLDMYCKCGSLEDANAVFVRM---- 223

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V+ D +++   +A +A                ++G+          + ++  M  V G++
Sbjct: 224 VEKDVISWSTMIAGLA----------------QNGY------SKEALKLFESMK-VLGIK 260

Query: 388 TDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVS--TALIDVYCRNGSM 442
            +  T+  VL A S    + EGL+     + H++K     D        +ID+  R G +
Sbjct: 261 PNYVTIVGVLFACSHAGLVEEGLY-----YFHSMKELFGIDPGREHYGCMIDLLGRAGRL 315

Query: 443 AEA-EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           +EA + + E +   D  TW A++     +   H+ +++  H      RLD     T V
Sbjct: 316 SEAVDLINEMECEPDAVTWRALLN----ACRVHRNVDVAIHAAKQILRLDPQDAGTYV 369



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 7/202 (3%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  H  I+      D F+ + L+ +YSR G L  A R+FD+M   DL+ W+SI+A +A +
Sbjct: 83  RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQN 142

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            +G+     E  RLF+ ++ +     + TL  +L+ C     +     VH + LK     
Sbjct: 143 SDGD-----EALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD--Q 195

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  ++ AL+++Y K G + +A  +F  M E+DV+ W  M+   A+NG+ +E   LF  + 
Sbjct: 196 DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMK 255

Query: 253 RSGLCPDDESVQCVLGVISDLG 274
             G+ P+  ++  VL   S  G
Sbjct: 256 VLGIKPNYVTIVGVLFACSHAG 277


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 195/554 (35%), Positives = 306/554 (55%), Gaps = 48/554 (8%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H   ++    A+ FV++ L D+Y ++G + EA  +F+     D   W AMI GY  + 
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199

Query: 472 NSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           N   A+  F  M   G    D+  + + + A G L      + +H+  MKSGFE ++ V 
Sbjct: 200 NLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVR 259

Query: 531 SGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           + + DMY K   M +A  +   D  + + V+ T++I G ++    + AL ++ ++R  GV
Sbjct: 260 NALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGV 319

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+EFTF+ ++K  +    LEQG Q+HA +IK    SD FV  +L+DMY KCG I  +  
Sbjct: 320 EPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQ 379

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           LFK+++    + WNA +  LAQHG+G E ++ F+ M + G+ P+ +TF+ +L+ACS+ GL
Sbjct: 380 LFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGL 439

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E  + F+ M++ +GIEP+ EHYS ++D  GRAGR  EA + I  MP + +A    +LL
Sbjct: 440 VDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR++G+ E G+  A+ +M LEP ++  +V LS I+A+  QW+DV + R  M+   +KK
Sbjct: 500 GACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKK 559

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
            P                        + I+ K+E L +RIKE GYVPDT F+  ++E+  
Sbjct: 560 LPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTA 619

Query: 867 KERALYYHSEKLARAYGLISTPPSSVIL---------------------SNKEPLYAN-- 903
           K+R L YHSE++A A+ LIS P +  I+                      N++ +  +  
Sbjct: 620 KQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNS 679

Query: 904 RFHHLRDGMCPCAD 917
           RFHH   G C C D
Sbjct: 680 RFHHFVKGGCSCGD 693



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 240/572 (41%), Gaps = 104/572 (18%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRC 101
           Q S    +++S +  + L+      DL LG+  HAR +L+ +     FL N+L+TMYS C
Sbjct: 7   QHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHC 66

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
             +  A RLFD MP  +L+SW +++     SG        +    F S+  +    ++  
Sbjct: 67  ADVPSAVRLFDAMPRPNLVSWTTLV-----SGLTQNSMHRDALAAFSSMCRAGLVPTQFA 121

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           L+   +   +     A   +H   +++G   + FV+  L ++YSK G + EA  +FD M 
Sbjct: 122 LSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMP 181

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----GVISD----- 272
           ++D V W  M+  YA+NG  E     F D+ R GL   D+ V C +    G + D     
Sbjct: 182 QKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLAR 241

Query: 273 ------LGKRHEEQVQAY---------------AIKLLLYNNNS-NVVLWNKKLSGYLQV 310
                 +    E++V                  A +++  +  S NVV     + GY++ 
Sbjct: 242 AIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIET 301

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
                A+  F+ + R  V+ +  TF   +   A    L  G Q+H   +K+   S   V 
Sbjct: 302 DCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVS 361

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           ++L++MY K    CGL                +   + L K+I  H              
Sbjct: 362 STLLDMYGK----CGL----------------ISLSIQLFKEIEYHT------------- 388

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSHMHTSGE 488
                                    D+A WNA I   +L+ + H  +A+  F  M +SG 
Sbjct: 389 -------------------------DIA-WNAAI--NVLAQHGHGREAIRAFDRMTSSGI 420

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDA 546
           R + IT  + + AC    ++ +G + + Y+MK   G E      S I+DMY + G + +A
Sbjct: 421 RPNHITFVSLLTACSHAGLVDEGLK-YFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEA 479

Query: 547 QSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           +    ++P  P+   W +++  C   G ++L 
Sbjct: 480 EKFIGEMPVKPNAYGWCSLLGACRMRGNKELG 511



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 199/465 (42%), Gaps = 64/465 (13%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A++L       N+V W   +SG  Q   +  A+  F +M R+ +         A  A A 
Sbjct: 72  AVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAA 131

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------------- 381
               + G Q+H   ++ GF + + V ++L +MYSK G                       
Sbjct: 132 LAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAM 191

Query: 382 ------------CVCGLR---------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                        V   R          DQ  L SVL AS  L +G  L++ IH   +K+
Sbjct: 192 IDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGW-LARAIHSCVMKS 250

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALEL 479
               +  V  AL D+Y +   M  A  + +   G  ++ +  ++I GYI ++   KAL +
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  +   G   +E T ++ +K C    +L+QG Q+HA  +K+    D  VSS +LDMY K
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +  +  +F +I    D+AW   I+    +G    A+  + +M  SG+ P+  TF  L
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDAYILF 651
           + A S    +++G       +K   S     GI         ++DMY + G +++A    
Sbjct: 431 LTACSHAGLVDEG-------LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFI 483

Query: 652 KQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            +M ++ N   W ++L      GN E      ++M    +EPD+ 
Sbjct: 484 GEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMK--LEPDNT 526



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 174/373 (46%), Gaps = 9/373 (2%)

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPE-----GLHLSKQIHVH-AIKNDTVADSFVSTALI 433
           MG   G  +     A+ LR ++ L        L L + +H    +     A +F++  LI
Sbjct: 1   MGKFRGQHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLI 60

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y     +  A  LF+     +L +W  ++ G   ++    AL  FS M  +G    + 
Sbjct: 61  TMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQF 120

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
            +++A +A   L     G Q+H   ++ GF+ +L V+S + DMY K G +V+A  +F+ +
Sbjct: 121 ALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQM 180

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQG 612
           P  D VAWT MI G   NG  + A+  +  MR  G+V  D+     ++ AS  L      
Sbjct: 181 PQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLA 240

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQ 671
           R IH+ ++K     +  V  +L DMYAK  ++++A  + K      N V   +++ G  +
Sbjct: 241 RAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIE 300

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
               E+ L +F +++  GVEP+  TF  ++  C+   L+ +  +  H    K  +  +  
Sbjct: 301 TDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQ-LHAEVIKTSLISDSF 359

Query: 732 HYSFLVDALGRAG 744
             S L+D  G+ G
Sbjct: 360 VSSTLLDMYGKCG 372



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFN 551
           + +A  +++CG    L+ G+ +HA  + SG       +++ ++ MY  C  +  A  +F+
Sbjct: 18  LRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFD 77

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P P+ V+WTT++SG   N     AL+ +  M  +G+VP +F  +   +A++ L A   
Sbjct: 78  AMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHA 137

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G Q+H   ++L   ++ FV  +L DMY+K G + +A  +F QM  ++ V W AM+ G A+
Sbjct: 138 GAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAK 197

Query: 672 HGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAY--ENFHLMREKYGIEP 728
           +GN E  +  F DM+  G V  D      VLSA   +G + + +     H    K G E 
Sbjct: 198 NGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA---SGGLKDGWLARAIHSCVMKSGFEQ 254

Query: 729 EVEHYSFLVDALGRAGRTKEAGELI 753
           EV   + L D   +A     A  ++
Sbjct: 255 EVAVRNALTDMYAKAADMDNAARVV 279



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 32/305 (10%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V+ ++   D Y        +LL F++        +   + S+++     + L  G   HA
Sbjct: 288 VVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 347

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
            ++ +S I D F+++ L+ MY +CG +  + +LF ++     I+WN+ +   A  G G  
Sbjct: 348 EVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGR- 406

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-------YVWASETVHGYALKIGL 190
               E  R F  +  S    + +T   LL  C  +G       Y ++ +  HG   K   
Sbjct: 407 ----EAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPK--- 459

Query: 191 VWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              E  S  ++++Y + G++ EA KF+ +   + +   W  +L A    G  +E+  +  
Sbjct: 460 --GEHYS-CIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRG-NKELGEIAA 515

Query: 250 DLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
           D +   L PD+  V   L G+ + LG+  + +    A++ L+ +N        KKL G+ 
Sbjct: 516 D-NMMKLEPDNTGVHVSLSGIYASLGQWEDVK----AVRKLMRDNRI------KKLPGFS 564

Query: 309 QVGDN 313
            V  N
Sbjct: 565 WVDSN 569


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 246/879 (27%), Positives = 411/879 (46%), Gaps = 124/879 (14%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWD-EFVSGALVNIYSKFGKIREAKFLFDGM 220
            A +L+LC     V     +H    K    ++ +F++G LV +Y K G + +A+ +FD M
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEE 279
            +R    W  M+ AY  NG       L+ ++   G+     S   +L   + L   R   
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202

Query: 280 QVQAYAIKL-------------LLYNNNSNV----------------VLWNKKLSGYLQV 310
           ++ +  +KL              +Y  N ++                VLWN  LS Y   
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIV 369
           G +   +E F  M  +    +S T + AL A  G     LG++IH + LKS  +S+ + V
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322

Query: 370 GNSLINMYSKMG-------------------------------------------CVCGL 386
            N+LI MY++ G                                              G 
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           ++D+ ++ S++ AS  L   L    ++H + IK+   ++  V   LID+Y +        
Sbjct: 383 KSDEVSMTSIIAASGRL-SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 441

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
             F      DL +W  +I GY  ++   +ALELF  +      +DE+ + + ++A   L 
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            +   K++H + ++ G  LD  + + ++D+Y KC  M  A  +F  I   D V+WT+MIS
Sbjct: 502 SMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMIS 560

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
               NG E  A+ ++ +M  +G+  D      ++ A++ L+AL +GR+IH  L++     
Sbjct: 561 SSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 620

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           +  + +++VDMYA CG+++ A  +F +++ +  + + +M+     HG G+  ++LF+ M+
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 680

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
              V PD ++F+ +L ACS+ GL+ E      +M  +Y +EP  EHY  LVD LGRA   
Sbjct: 681 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            EA E +  M  E +A +  ALL ACR   + E G+  A++L+ LEP +    VL+SN+F
Sbjct: 741 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 800

Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
           A   +W+DV   R +MK   ++K P                       +  I+ K+  + 
Sbjct: 801 AEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVT 860

Query: 844 KRI-KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---- 898
           +++ +E GYV DT FVL +V+E EK + L+ HSE++A AYGL+ TP  + +   K     
Sbjct: 861 RKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVC 920

Query: 899 -----------PLY--------ANRFHHLRDGMCPCADN 918
                       L+        ANRFHH   G+C C D+
Sbjct: 921 RDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDS 959



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 200/732 (27%), Positives = 332/732 (45%), Gaps = 99/732 (13%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL------RHAISTSDLLLGKSTHARILNS- 82
            L  F   L    Q+   S ++S  + F+ +      R A+S      G+  H+RI  + 
Sbjct: 56  KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQ-----GRQLHSRIFKTF 110

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
                 FL   L+ MY +CGSL  A ++FD+MPDR   +WN+++ AY  +GE        
Sbjct: 111 PSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEP-----AS 165

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
              L+ ++R         +   LLK C     + +   +H   +K+G     F+  ALV+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225

Query: 203 IYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           +Y+K   +  A+ LFDG QE+ D VLW  +L +Y+ +G   E   LF ++H +G  P+  
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285

Query: 262 SVQCVLGVI-----SDLGKRHEEQV-------------------------QAYAIKLLLY 291
           ++   L        + LGK     V                            A ++L  
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
            NN++VV WN  + GY+Q      A+E F +MI +  + D V+    +AA     NL  G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------------------- 384
            ++H   +K G+ S + VGN+LI+MYSK    C                           
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465

Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                            +  D+  L S+LRASS L   L + K+IH H ++   + D+ +
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML-IVKEIHCHILRKGLL-DTVI 523

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
              L+DVY +  +M  A  +FE+  G D+ +W +MI    L+ N  +A+ELF  M  +G 
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D + +   + A   L  L +G+++H Y ++ GF L+  ++  ++DMY  CG +  A++
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+ I     + +T+MI+    +G    A+ ++ +MR   V PD  +F  L+ A S    
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 703

Query: 609 LEQGR---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
           L++GR   +I  +  +L+   + +V   LVDM  +   + +A+   K M    T  +W A
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEHYV--CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761

Query: 665 MLVGLAQHGNGE 676
           +L     H   E
Sbjct: 762 LLAACRSHSEKE 773



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 129/243 (53%), Gaps = 7/243 (2%)

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILD 535
           E F  +  S         A  ++ CG    + QG+Q+H+   K+   FELD  ++  ++ 
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVF 124

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG++ DA+ +F+++P     AW TMI   V NGE   AL++Y  MR+ GV     +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F  L+KA + L  +  G ++H+ L+KL   S  F+  +LV MYAK  ++  A  LF    
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 656 MR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC---SYTGLVS 711
            + + VLWN++L   +  G   ETL+LF +M   G  P+S T +  L+AC   SY  L  
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304

Query: 712 EAY 714
           E +
Sbjct: 305 EIH 307



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 185/395 (46%), Gaps = 20/395 (5%)

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLP------------EGLHLSKQIHVHAIKN-DTVAD 425
           K+ C  G+ T+ F    V   +S +               +   +Q+H    K   +   
Sbjct: 56  KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL 115

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            F++  L+ +Y + GS+ +AE +F+         WN MI  Y+ +     AL L+ +M  
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G  L   +    +KAC  L  ++ G ++H+  +K G+     + + ++ MY K   +  
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 546 AQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           A+ +F+      D V W +++S    +G+    L ++ +M ++G  P+ +T    + A  
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295

Query: 605 CLTALEQGRQIHANLIKLDC-SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
             +  + G++IHA+++K    SS+ +V  +L+ MY +CG +  A  + +QM+  + V WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE--AYENFHLMR 721
           +++ G  Q+   +E L+ F DM A G + D V+   +++A   +G +S   A    H   
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA---SGRLSNLLAGMELHAYV 412

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            K+G +  ++  + L+D   +   T   G   L M
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 20/181 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +L      +  +   ++ MY+ CG L  A+ +FD++  + L+ + S++ AY  
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYAL 186
            G G A        LF  +R        ++   LL  C     L  G  +     H Y L
Sbjct: 666 HGCGKA-----AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVML---RAYAENGFG 241
           +    W E     LV++  +   + EA F F  M   E    +W  +L   R+++E   G
Sbjct: 721 E---PWPEHYV-CLVDMLGRANCVVEA-FEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 775

Query: 242 E 242
           E
Sbjct: 776 E 776


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 202/593 (34%), Positives = 316/593 (53%), Gaps = 52/593 (8%)

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           +++ M  + G   G R D  TL SVL A +     LH  +++H  A++        VSTA
Sbjct: 104 AVVRMQGEEG---GERPDSVTLVSVLPACAD-ARALHACREVHAFALRAGLDELVNVSTA 159

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           ++D YC+ G++  A  +F+     +  +WNAMI GY  + N+ +A+ LF  M   G  + 
Sbjct: 160 VLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVT 219

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           + ++  A++ACG L  L + +++H   ++ G   ++ V++ ++  Y KC     A  +FN
Sbjct: 220 DASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFN 279

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           ++      ++W  MI G   N   + A  ++ +M+L  V PD FT   ++ A + ++   
Sbjct: 280 ELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPL 339

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           Q R IH   I+     D +V  +L+DMY+KCG +  A  LF     R+ + WNAM+ G  
Sbjct: 340 QARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYG 399

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG G+  ++LFE+MK  G  P+  TF+ VL+ACS+ GLV E  + F  M++ YG+EP +
Sbjct: 400 SHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGM 459

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY  +VD LGRAG+  EA   I +MP E   S++ A+LGAC++  + E  +  A+ +  
Sbjct: 460 EHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFE 519

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------- 831
           L P +   +VLL+NI+A A+ W DV   R  M++K ++K P                   
Sbjct: 520 LGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGST 579

Query: 832 ----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               A  I+A++  LI+ IK+ GYVPDTD +  DVE++ K + L  HSEKLA AYGLI T
Sbjct: 580 NHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRT 638

Query: 888 PPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            P + I                     L+ +E +  +  RFHH +DG C C D
Sbjct: 639 APGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGD 691



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 192/371 (51%), Gaps = 11/371 (2%)

Query: 386 LRTDQFT-LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           LRT  FT L  +  A + L  G  +  Q+    + ++++A    STAL ++Y +    A+
Sbjct: 16  LRT--FTALLKLCAARADLATGRAVHAQLEARGLASESIA----STALANMYFKCRRPAD 69

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH--TSGERLDEITIATAVKAC 502
           A  +F+     D   WNA++ GY  +     A+E    M     GER D +T+ + + AC
Sbjct: 70  ARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
                L   +++HA+A+++G +  + VS+ +LD Y KCGA+  A+++F+ +P  + V+W 
Sbjct: 130 ADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            MI G  DNG    A++++ +M   GV   + +    ++A   L  L++ R++H  L+++
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGEETLKL 681
             SS+  V  +L+  YAKC   + A  +F ++  + T + WNAM++G  Q+   E+  +L
Sbjct: 250 GLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERL 309

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M+   V PDS T + V+ A +      +A    H    ++ ++ +V   + L+D   
Sbjct: 310 FARMQLENVRPDSFTLVSVIPAVADISDPLQA-RWIHGYSIRHQLDQDVYVLTALIDMYS 368

Query: 742 RAGRTKEAGEL 752
           + GR   A  L
Sbjct: 369 KCGRVSIARRL 379



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 162/358 (45%), Gaps = 37/358 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+   + +DL  G++ HA++       +   +  L  MY +C     ARR+FD+MP R
Sbjct: 21  ALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSR 80

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ++WN+++A YA +G     +  E     +   E       +TL  +L  C  +  + A
Sbjct: 81  DRVAWNAVVAGYARNGL--PSSAMEAVVRMQG-EEGGERPDSVTLVSVLPACADARALHA 137

Query: 178 SETVHGYALKIGLVWDEFV--SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              VH +AL+ GL  DE V  S A+++ Y K G +  A+ +FD M  R+ V W  M+  Y
Sbjct: 138 CREVHAFALRAGL--DELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQ------- 282
           A+NG   E   LF  + + G+   D SV   L    +LG      + HE  V+       
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255

Query: 283 --------AYA------IKLLLYN---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                    YA      +   ++N   N    + WN  + G+ Q      A   F  M  
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            NV+ DS T +  + AVA   +    + IHG +++      V V  +LI+MYSK G V
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 148/327 (45%), Gaps = 6/327 (1%)

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T    +K C     L  G+ +HA     G   +   S+ + +MY KC    DA+ +F+ +
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALS--IYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           P+ D VAW  +++G   NG    A+   +  Q    G  PD  T   ++ A +   AL  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
            R++HA  ++        V  +++D Y KCG +E A  +F  M +RN+V WNAM+ G A 
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +GN  E + LF  M   GV+    + +  L AC   G + E     H +  + G+   V 
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEV-RRVHELLVRVGLSSNVS 256

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASA-SMHRALLGACRVQGDTETGKWVAEKLMA 790
             + L+    +  R   A ++   +  + +  S +  +LG  + +   +  +  A   M 
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR--MQ 314

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTS 817
           LE     ++ L+S I A A+  D + +
Sbjct: 315 LENVRPDSFTLVSVIPAVADISDPLQA 341



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 160/375 (42%), Gaps = 38/375 (10%)

Query: 18  VIFSSFTKDTYRN-LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           V +++      RN LPS ++  +  +Q         S    S+L        L   +  H
Sbjct: 83  VAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVH 142

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           A  L +       ++  ++  Y +CG++  AR +FD MP R+ +SWN+++  YA +G   
Sbjct: 143 AFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNG--- 199

Query: 137 AENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
             N TE   LF R ++E +  T    LA L + C   GY+     VH   +++GL  +  
Sbjct: 200 --NATEAMALFWRMVQEGVDVTDASVLAAL-QACGELGYLDEVRRVHELLVRVGLSSNVS 256

Query: 196 VSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           V+ AL+  Y+K  +   A  +F+ +  ++  + W  M+  + +N   E+   LF  +   
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316

Query: 255 GLCPDDESVQCVLGVISDLGK------------RHEEQVQAYAIKLL--LYNN------- 293
            + PD  ++  V+  ++D+              RH+     Y +  L  +Y+        
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376

Query: 294 --------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
                   + +V+ WN  + GY   G    A+E F  M  +    +  TFL  LAA +  
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 346 DNLNLGQQIHGTTLK 360
             ++ GQ+   +  K
Sbjct: 437 GLVDEGQKYFASMKK 451



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 15/183 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      SD L  +  H   +      D ++   L+ MYS+CG +  ARRLFD   DR
Sbjct: 327 SVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDR 386

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
            +I+WN+++  Y   G G A        LF  ++ + +  +  T   +L  C  +G V  
Sbjct: 387 HVITWNAMIHGYGSHGFGQA-----AVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 441

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
              + +     Y L+ G+  + +  G +V++  + GK+ EA      M  E  + ++  M
Sbjct: 442 GQKYFASMKKDYGLEPGM--EHY--GTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAM 497

Query: 232 LRA 234
           L A
Sbjct: 498 LGA 500


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 190/554 (34%), Positives = 302/554 (54%), Gaps = 47/554 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +++IH H   +    D+F+  +LI +YC+ GS+ EA  +F+     D+ +W ++I GY  
Sbjct: 70  ARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQ 129

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++   +A+ L   M     + +  T A+ +KA G       G Q+HA A+K  +  D+ V
Sbjct: 130 NDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYV 189

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S +LDMY +CG M  A ++F+ + + + V+W  +ISG    G+ + AL ++ +M+ +G 
Sbjct: 190 GSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGF 249

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FT++ +    + + ALEQG+ +HA+++K       FVG +++DMYAK G++ DA  
Sbjct: 250 EATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARK 309

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F+++  ++ V WN+ML   AQ+G G+E +  FE+M+  G+  + +TF+ +L+ACS+ GL
Sbjct: 310 VFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGL 369

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E    F +++E Y +EPE+EHY  +VD LGRAG    A   I  MP E +A++  ALL
Sbjct: 370 VKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALL 428

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            ACR+  + + G++ A+ +  L+P DS   VLL NI+A+   WD     R  MK   VKK
Sbjct: 429 AACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKK 488

Query: 830 DPA----------------DLIFAKVEGLIK-------RIKEGGYVPDTDFVLLDVEEEE 866
           +PA                D    + E + K       +I++ GYVPD D+VLL V+E+E
Sbjct: 489 EPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQE 548

Query: 867 KERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------AN 903
           +E  L YHSEK+A A+ LI  P  + I   K                            N
Sbjct: 549 REANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTN 608

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  +G C C D
Sbjct: 609 RFHHFSNGSCSCGD 622



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 126/226 (55%), Gaps = 1/226 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L   +++H +   S FE D  + + ++ +Y KCG++V+A  +F+ +   D 
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WT++I+G   N     A+ +   M      P+ FTFA L+KA+        G QIHA 
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K D   D +VG +L+DMYA+CG ++ A  +F ++D +N V WNA++ G A+ G+GE  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREK 723
           L +F +M+ +G E    T+  + S  +  G + +  + + H+++ +
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSR 283



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 45/319 (14%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  H  + +S    D FL N+L+ +Y +CGS+V A ++FDKM  +D++SW S++A YA +
Sbjct: 71  RKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQN 130

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
                +   E   L   + +     +  T A LLK   +         +H  A+K     
Sbjct: 131 -----DMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHE 185

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D +V  AL+++Y++ GK+  A  +FD +  ++ V W  ++  +A  G GE    +F ++ 
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK-------------LLLYNN----- 293
           R+G      +   +   ++ +G   + + V A+ +K             L +Y       
Sbjct: 246 RNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMI 305

Query: 294 ----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                     N ++V WN  L+ + Q G    A+  F  M +S +  + +TFL  L A +
Sbjct: 306 DARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACS 365

Query: 344 GTDNLNLGQQIHGTTLKSG 362
                      HG  +K G
Sbjct: 366 -----------HGGLVKEG 373



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 135/263 (51%), Gaps = 12/263 (4%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           ++P+ ++ LLP + K  F  +  +  + S+L+ A + +D  +G   HA  +      D +
Sbjct: 131 DMPAEAIGLLPGMLKGRFKPNGFT--FASLLKAAGAYADSGIGGQIHALAVKCDWHEDVY 188

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ MY+RCG +  A  +FDK+  ++ +SWN++++ +A  G+G          +F  
Sbjct: 189 VGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGET-----ALMVFAE 243

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++ +    +  T + +       G +   + VH + +K       FV   ++++Y+K G 
Sbjct: 244 MQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGS 303

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-- 267
           + +A+ +F+ +  +D+V W  ML A+A+ G G+E    F ++ +SG+  +  +  C+L  
Sbjct: 304 MIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTA 363

Query: 268 ---GVISDLGKRHEEQVQAYAIK 287
              G +   GK + + ++ Y ++
Sbjct: 364 CSHGGLVKEGKHYFDMIKEYNLE 386



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 48/332 (14%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            +  C  S  +  +  +HG+        D F+  +L+++Y K G + EA  +FD M+++D
Sbjct: 57  FITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKD 116

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQV 281
           +V W  ++  YA+N    E   L   + +    P+  +   +L   G  +D G     Q+
Sbjct: 117 MVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGI--GGQI 174

Query: 282 QAYAIK-------------LLLYN---------------NNSNVVLWNKKLSGYLQVGDN 313
            A A+K             L +Y                ++ N V WN  +SG+ + GD 
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M R+  +    T+    + +AG   L  G+ +H   +KS       VGN++
Sbjct: 235 ETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTM 294

Query: 374 INMYSKMGCVCGLR--------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           ++MY+K G +   R         D  T  S+L A +    GL      H   ++   +  
Sbjct: 295 LDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQY--GLGKEAVSHFEEMRKSGIYL 352

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           + ++   I   C +G + +     E K  FD+
Sbjct: 353 NQITFLCILTACSHGGLVK-----EGKHYFDM 379



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 8/195 (4%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P    +   + A +    L+  R+IH +L       D F+  SL+ +Y KCG++ +A+
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY-- 706
            +F +M  ++ V W +++ G AQ+    E + L   M     +P+  TF  +L A     
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 707 -TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
            +G+  +     H +  K     +V   S L+D   R G+   A  +   +  +   S +
Sbjct: 167 DSGIGGQ----IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222

Query: 766 RALLGACRVQGDTET 780
             + G  R +GD ET
Sbjct: 223 ALISGFAR-KGDGET 236


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 243/883 (27%), Positives = 411/883 (46%), Gaps = 135/883 (15%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A LL +   S  +   + VH    K  +    F+   LV +Y   G + +AK  FD M  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS------DLGKR 276
           +D + W  ++RA+ + G  E+  HLF  +   G+ P + +   VLG  S      + G+R
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 277 HEEQVQAYAIK---------LLLYNNNSNV---------------VLWNKKLSGYLQVGD 312
               ++  A++         L +Y   S+V               V WN  ++ Y Q   
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ------------QIHGTTLK 360
           +  AI+ F  M+   V+ + +TF+  L A +   +L + +             +H ++  
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 361 SG---FYSA-----------------VIVGNSLINMYS------------KMGCVCGLRT 388
           +    FY +                 +I+  ++I  Y+            K+  + G++ 
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKL 301

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIH--VHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           D+    +VL A S  P GL   + IH  +  I+ D   ++    ALI++Y + GS+ EA 
Sbjct: 302 DRIACMAVLNACSG-PRGLEEGRIIHGFMREIRFDRHVNA--GNALINMYGKCGSLEEAV 358

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F +    D+ +WN +I  +   +   +AL L   M   G + D+I+   A+  C    
Sbjct: 359 EVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSE 418

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L +G+ +H++ ++SG + D+ + + ILDMY  C +  DA  +F  +   D V+W  MI+
Sbjct: 419 ALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMIT 478

Query: 567 GCVDNGE-EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
                      AL ++ QM+L G +PD  +F   + A +   +L +G+ +H  + +    
Sbjct: 479 AYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLE 538

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           S+  V  ++++MYAK G +  A  +F +M + + + WN M+   AQHG+ ++ L+ F  M
Sbjct: 539 SNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRM 598

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAG 744
              G  P+ VTF+ V+SACS+ GLV +  + F  L+ +   I P  EHY  +VD + RAG
Sbjct: 599 NHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAG 658

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           +   A + I + P +    +H  +LGA +V  D E  +  AE LM L P  S+AYV+LSN
Sbjct: 659 KLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSN 718

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKE---------------- 848
           ++    + D+    R  M  KN++K+PA   F+ +  + +R+ E                
Sbjct: 719 LYDEVGKKDEGAKIRRLMYEKNIRKEPA---FSSI-AVKRRVHEFFTGDTTNARTPEILE 774

Query: 849 -----------GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
                       GY PDT  +L DV +E+K+R L YHSEKLA A+GLIST P + +    
Sbjct: 775 ELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIK 834

Query: 894 -----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                            ++ +E +   ++RFHH  +G C C D
Sbjct: 835 NLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGD 877



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 188/736 (25%), Positives = 313/736 (42%), Gaps = 85/736 (11%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           +  L LGK  HARI  S+     F+ + L+ MY  CGSL+ A+  FD+MP +D ++W  +
Sbjct: 11  SRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARL 70

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           + A+   G+       +   LFRS++ E +   +R  +A L         +     +HG 
Sbjct: 71  IRAHGQIGDSE-----QALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGV 125

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
                +  D +VS  L+++Y K   + +A+ +FDG++ + VV W  M+ AYA+    E+ 
Sbjct: 126 LRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQA 185

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLY 291
             +F  +   G+  +  +   VL   S L              +R  + +   +    L 
Sbjct: 186 IQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALV 245

Query: 292 N-----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           N                 +   ++L    ++ Y Q      A+E F  M+   V+ D + 
Sbjct: 246 NFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIA 305

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----CVCGLRTDQ 390
            +  L A +G   L  G+ IHG   +  F   V  GN+LINMY K G     V   R+ Q
Sbjct: 306 CMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQ 365

Query: 391 F-------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-------------------- 423
                   T+ +     S  PE LHL   + +  +K D +                    
Sbjct: 366 HRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRM 425

Query: 424 -----------ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
                      AD  +  A++D+Y    S  +A  +F      D  +WNAMI  Y     
Sbjct: 426 IHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPR 485

Query: 473 -SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
            S +AL LF  M   G   D I+   A+ AC     L +GK +H    ++G E ++ V++
Sbjct: 486 LSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVAN 545

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +L+MY K G +V A+ +F  +P PD ++W  MIS    +G  D  L  + +M   G +P
Sbjct: 546 AVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLP 605

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYI 649
           ++ TF  +V A S    ++ G Q+  +L+    +  P       +VD+ A+ G ++ A  
Sbjct: 606 NDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEK 665

Query: 650 LFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYT 707
                 ++ + V+ + ML     H + E   K  E +    + PD S  ++ + +     
Sbjct: 666 FIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLME--LTPDRSAAYVVLSNLYDEV 723

Query: 708 GLVSEAYENFHLMREK 723
           G   E  +   LM EK
Sbjct: 724 GKKDEGAKIRRLMYEK 739



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 4/210 (1%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           ++  L  G+  H+ I+ S    D  L N ++ MY  C S   A R+F  M  RD +SWN+
Sbjct: 416 TSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNA 475

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ AYA          +E   LF+ ++        ++    L  C +   +   + +H  
Sbjct: 476 MITAYA----AQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDR 531

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
             + GL  +  V+ A++N+Y+K G +  A+ +F  M   DV+ W  M+ A+A++G  ++V
Sbjct: 532 IRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQV 591

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
              F  ++  G  P+D +   V+   S  G
Sbjct: 592 LRFFRRMNHEGKLPNDVTFVSVVSACSHGG 621



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 37/238 (15%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H RI  +    +  + N ++ MY++ G+LV AR++F KMP  D+ISWN +++A+A 
Sbjct: 525 GKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQ 584

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
              G+A+ V    R FR +       + +T   ++  C   G V       G  L + L+
Sbjct: 585 --HGHADQV---LRFFRRMNHEGKLPNDVTFVSVVSACSHGGLV-----KDGVQLFVSLL 634

Query: 192 WD-EFVSG------ALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
            D   +S        +V++ ++ GK+  A KF+     + D V+   ML        G  
Sbjct: 635 HDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTML--------GAS 686

Query: 244 VFHLFVDLHRSG------LCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNN 294
             H  V+  R        L PD  +   VL  + D +GK+ E       I+ L+Y  N
Sbjct: 687 KVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDE----GAKIRRLMYEKN 740


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 231/762 (30%), Positives = 369/762 (48%), Gaps = 114/762 (14%)

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           S  +V AS       L+  + W++ ++G     Y+K   + +A F F+ M  RDVV W  
Sbjct: 54  SRDFVSASMVFDRMPLRDVVSWNKMING-----YAKSNNMVKASFFFNMMPVRDVVSWNS 108

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL----------------- 273
           ML  Y +NG   +   +FVD+ R+G   D  +   +L V S L                 
Sbjct: 109 MLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVG 168

Query: 274 -----------------GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
                            GKR  E     ++++       N V W+  ++G +Q      A
Sbjct: 169 CDTDVVAASALLDMYAKGKRFVE-----SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           ++ F  M + N       +   L + A    L LG Q+H   LKS F +  IV  + ++M
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283

Query: 377 YSKMGCV-------------------------------------------CGLRTDQFTL 393
           Y+K   +                                            GL  D+ +L
Sbjct: 284 YAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           + V RA + L +GL    QI+  AIK+    D  V+ A ID+Y +  ++AEA  +F+   
Sbjct: 344 SGVFRACA-LVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 402

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC--GCLLMLKQG 511
             D  +WNA+I  +  +   ++ L LF  M  S    DE T  + +KAC  G L     G
Sbjct: 403 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSL---GYG 459

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA----------- 560
            ++H+  +KSG   +  V   ++DMY KCG + +A+ I +      +V+           
Sbjct: 460 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHN 519

Query: 561 ---------WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
                    W ++ISG V   + + A  ++ +M   G+ PD+FT+A ++   + L +   
Sbjct: 520 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 579

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA +IK +  SD ++  +LVDMY+KCG++ D+ ++F++   R+ V WNAM+ G A 
Sbjct: 580 GKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 639

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG GEE ++LFE M    ++P+ VTFI +L AC++ GL+ +  E F++M+  YG++P++ 
Sbjct: 640 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP 699

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV-QGDTETGKWVAEKLMA 790
           HYS +VD LG++G+ K A ELI  MPFEA   + R LLG C + + + E  +     L+ 
Sbjct: 700 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 759

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L+P DSSAY LLSN++A A  W+ V+  R  M+   +KK+P 
Sbjct: 760 LDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 801



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 184/640 (28%), Positives = 295/640 (46%), Gaps = 109/640 (17%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C   G +   +  H + +  G     FV   L+ +Y+       A  +FD M  RDVV W
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKL 288
             M+  YA++    +    F       + P                              
Sbjct: 76  NKMINGYAKSNNMVKASFFF------NMMP------------------------------ 99

Query: 289 LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                  +VV WN  LSGYLQ G+   +IE FV+M R+  ++D  TF + L   +  ++ 
Sbjct: 100 -----VRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDT 154

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------------MGC 382
           +LG QIHG  ++ G  + V+  ++L++MY+K                           GC
Sbjct: 155 SLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 214

Query: 383 V-----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           V                       Q   ASVLR+ ++L E L L  Q+H HA+K+D  AD
Sbjct: 215 VQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE-LRLGGQLHAHALKSDFAAD 273

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
             V TA +D+Y +  +M +A+ LF+  +  +  ++NAMI GY    +  KAL LF  + +
Sbjct: 274 GIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS 333

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
           SG   DEI+++   +AC  +  L +G Q++  A+KS   LD+CV++  +DMY KC A+ +
Sbjct: 334 SGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAE 393

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A  +F+++   D V+W  +I+    NG+    L ++  M  S + PDEFTF  ++KA + 
Sbjct: 394 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG 453

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL----FKQMDMRNT-- 659
             +L  G +IH++++K   +S+  VG SL+DMY+KCG IE+A  +    F++ ++  T  
Sbjct: 454 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTME 512

Query: 660 --------------VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
                         V WN+++ G       E+   LF  M   G+ PD  T+  VL  C+
Sbjct: 513 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 572

Query: 706 YTGLVSEAY-ENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
              L S    +  H    K  ++ +V   S LVD   + G
Sbjct: 573 --NLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCG 610



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 164/654 (25%), Positives = 293/654 (44%), Gaps = 82/654 (12%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+      D  LG   H  ++      D    + L+ MY++    V + R+F  +P+++
Sbjct: 144 ILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 119 LISWNSILAAYAHSGEGNAEN--VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            +SW++I+A       G  +N  ++   + F+ +++     S+   A +L+ C +   + 
Sbjct: 204 SVSWSAIIA-------GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 256

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +H +ALK     D  V  A +++Y+K   +++A+ LFD  +  +   +  M+  Y+
Sbjct: 257 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYS 316

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV------------ISDLGKRH------- 277
           +   G +   LF  L  SGL  D+ S+  V               I DL  +        
Sbjct: 317 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVC 376

Query: 278 ----------EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                     + Q  A A ++       + V WN  ++ + Q G  +  +  FV+M+RS 
Sbjct: 377 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 436

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           ++ D  TF   L A  G  +L  G +IH + +KSG  S   VG SLI+MYSK    CG+ 
Sbjct: 437 IEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK----CGM- 490

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                              +  +++IH    +   V+               G+M E E 
Sbjct: 491 -------------------IEEAEKIHSRFFQRTNVS---------------GTMEELEK 516

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +   +      +WN++I GY++   S  A  LF+ M   G   D+ T AT +  C  L  
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 576

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
              GKQ+HA  +K   + D+ +SS ++DMY KCG + D++ +F      D V W  MI G
Sbjct: 577 AGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 636

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G+ + A+ ++ +M L  + P+  TF  +++A + +  +++G + +  ++K D   D
Sbjct: 637 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLD 695

Query: 628 PFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEET 678
           P +    ++VD+  K G ++ A  L ++M    + V+W  +L     H N  E 
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 749



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 237/590 (40%), Gaps = 118/590 (20%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           NL S +L     +QK   ++  S S + S+LR   + S+L LG   HA  L S    D  
Sbjct: 218 NLLSLALKFFKEMQK--VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 275

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           +    + MY++C ++  A+ LFDK  + +  S+N+++  Y+    G      +   LF  
Sbjct: 276 VRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHG-----FKALLLFHR 330

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L  S      ++L+ + + C     +     ++  A+K  L  D  V+ A +++Y K   
Sbjct: 331 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQA 390

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD--------- 260
           + EA  +FD M+ RD V W  ++ A+ +NG G E   LFV + RS + PD+         
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKA 450

Query: 261 ------------------------ESVQCVL-------GVISDLGKRHEEQVQAYAI--- 286
                                    SV C L       G+I +  K H    Q   +   
Sbjct: 451 CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGT 510

Query: 287 -----KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                K+         V WN  +SGY+    +  A   F  M+   +  D  T+   L  
Sbjct: 511 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 570

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
            A   +  LG+QIH   +K    S V + ++L++MYSK G                    
Sbjct: 571 CANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCG-------------------- 610

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                LH S+ +   +++ D V                                   TWN
Sbjct: 611 ----DLHDSRLMFEKSLRRDFV-----------------------------------TWN 631

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI GY       +A++LF  M     + + +T  + ++AC  + ++ +G + + Y MK 
Sbjct: 632 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKR 690

Query: 522 GFELD--LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            + LD  L   S ++D+  K G +  A  +  ++P   DDV W T++  C
Sbjct: 691 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 740



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 35/216 (16%)

Query: 590 VPDEFTFAILVKASSCLT--ALEQGRQIHANLI---------KLDC------SSDPFVGI 632
           + +   F  + +A  C    ALE G+Q HA++I          L+C      +S  FV  
Sbjct: 1   MAENLRFLRMNRAVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSA 60

Query: 633 SLV----------------DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           S+V                + YAK  N+  A   F  M +R+ V WN+ML G  Q+G   
Sbjct: 61  SMVFDRMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETL 120

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           +++++F DM   G E D  TF  +L  CS     S   +  H +  + G + +V   S L
Sbjct: 121 KSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQ-IHGVVVRVGCDTDVVAASAL 179

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
           +D   +  R  E+  +   +P + S S   A++  C
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWS-AIIAGC 214


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/554 (35%), Positives = 299/554 (53%), Gaps = 46/554 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K  H   I+ D   D  +   LI+ Y + G +  A  +F+      L +WN MI  Y  
Sbjct: 80  AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +AL++F  M   G +  E TI++ + ACG      + K++H  ++K+  +L+L V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +LD+Y KCG + DA  +F  +     V W++M++G V N   + AL +Y + +   +
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
             ++FT + ++ A S L AL +G+Q+HA + K    S+ FV  S VDMYAKCG++ ++YI
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++  +N  LWN ++ G A+H   +E + LFE M+  G+ P+ VTF  +LS C +TGL
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E    F LMR  YG+ P V HYS +VD LGRAG   EA ELI S+PF+ +AS+  +LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            +CRV  + E  +  AEKL  LEP ++  +VLLSNI+AA  QW+++  +R  ++  +VKK
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 499

Query: 830 -------DPADL----------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
                  D  D                 I + ++ L+ + ++ GY P  +  L DVE  +
Sbjct: 500 VRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGK 559

Query: 867 KERALYYHSEKLARAYGLISTPPSS---------VILSNKEPLYA--------------N 903
           KE  L  HSEKLA  +GL+  P SS         + +   E + A              N
Sbjct: 560 KEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVN 619

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  DG C C D
Sbjct: 620 RFHHFSDGHCSCGD 633



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 1/240 (0%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           + K  H   ++   E D+ + + +++ Y KCG +  A+ +F+ +     V+W TMI    
Sbjct: 79  EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N  E  AL I+ +MR  G    EFT + ++ A        + +++H   +K     + +
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           VG +L+D+YAKCG I+DA  +F+ M  +++V W++M+ G  Q+ N EE L L+   +   
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           +E +  T   V+ ACS    + E  +  H +  K G    V   S  VD   + G  +E+
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/476 (21%), Positives = 192/476 (40%), Gaps = 103/476 (21%)

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           S+LA+Y      + E V+ G       R S  F++R  +  +L+LC  +G V  ++  HG
Sbjct: 39  SVLASY------DQEEVSPG-------RYSNEFSNRNLVHEILQLCARNGAVMEAKACHG 85

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             ++I L  D  +   L+N YSK G +  A+ +FDGM ER +V W  M+  Y  N    E
Sbjct: 86  KIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESE 145

Query: 244 VFHLFVDLHRSGLCPDDESVQCVL---GVISD---LGKRHEEQVQAY------------- 284
              +F+++   G    + ++  VL   GV  D     K H   V+               
Sbjct: 146 ALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLD 205

Query: 285 ----------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                     A+++     + + V W+  ++GY+Q  +   A+  +    R +++ +  T
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
               + A +    L  G+Q+H    KSGF S V V +S ++MY+K    CG   + + + 
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK----CGSLRESYIIF 321

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S ++                    KN  + ++ +S      + ++    E   LFE    
Sbjct: 322 SEVQE-------------------KNLELWNTIISG-----FAKHARPKEVMILFEK--- 354

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                                       M   G   +E+T ++ +  CG   ++++G++ 
Sbjct: 355 ----------------------------MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386

Query: 515 HAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
                 + G   ++   S ++D+  + G + +A  +   IP  P    W ++++ C
Sbjct: 387 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 34/324 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+       ++  K+ H +I+      D  L N L+  YS+CG +  AR++FD M +R 
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SWN+++  Y  +        +E   +F  +R      S  T++ +L  C  +      
Sbjct: 127 LVSWNTMIGLYTRN-----RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H  ++K  +  + +V  AL+++Y+K G I++A  +F+ MQ++  V W  M+  Y +N
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN---- 293
              EE   L+    R  L  +  ++  V+   S+L    E +Q+ A   K    +N    
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301

Query: 294 ------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     N+ LWN  +SG+ +       +  F  M +  + 
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQ 353
            + VTF   L+    T  +  G++
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRR 385



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 120/241 (49%), Gaps = 6/241 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       D L  K  H   + +    + ++   L+ +Y++CG +  A ++F+ M D+
Sbjct: 167 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W+S++A Y  +     +N  E   L+R  +      ++ TL+ ++  C +   +  
Sbjct: 227 SSVTWSSMVAGYVQN-----KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H    K G   + FV+ + V++Y+K G +RE+  +F  +QE+++ LW  ++  +A+
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +   +EV  LF  + + G+ P++ +   +L V    G   EE  + + +    Y  + NV
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV-EEGRRFFKLMRTTYGLSPNV 400

Query: 298 V 298
           V
Sbjct: 401 V 401



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A+ + +  H  +I++D   D  +   L++ Y+KCG +E A  +F  M  R+ V WN M +
Sbjct: 76  AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM-I 134

Query: 668 GLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE--NFHLMREKY 724
           GL      E E L +F +M+  G +    T   VLSAC   G+  +A E    H +  K 
Sbjct: 135 GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKT 191

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            I+  +   + L+D   + G  K+A ++  SM  ++S +    + G
Sbjct: 192 CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 6/158 (3%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V +SS      +N  ++  +LL + +    S   +     S++    + + L+ GK  HA
Sbjct: 229 VTWSSMVAGYVQN-KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
            I  S    + F+ ++ + MY++CGSL  +  +F ++ +++L  WN+I++ +A       
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK- 346

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               E   LF  +++     + +T + LL +C  +G V
Sbjct: 347 ----EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 213/667 (31%), Positives = 338/667 (50%), Gaps = 76/667 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV LWN  +S Y ++GD   +I  F  M+   ++          +A    D L     I 
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE-----SASELFDKLCDRDVIS 218

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             ++ SG+ S  +    L  +Y +M  + G+  D  T+ SVL   ++    L L K +H 
Sbjct: 219 WNSMISGYVSNGLTERGL-EIYKQMMYL-GIDVDLATIISVLVGCAN-SGTLSLGKAVHS 275

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            AIK+        S  L+D+Y + G +  A  +FE     ++ +W +MI GY     S  
Sbjct: 276 LAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ L   M   G +LD +   + + AC     L  GK +H Y   +  E +L V + ++D
Sbjct: 336 AIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG+M  A S+F+ +   D ++W TMI      GE               + PD  T
Sbjct: 396 MYTKCGSMDGANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRT 434

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A + L+ALE+G++IH  +++   SSD  V  +LVD+Y KCG +  A +LF  + 
Sbjct: 435 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V W  M+ G   HG G E +  F +M+  G+EPD V+FI +L ACS++GL+ + + 
Sbjct: 495 SKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F++M+  + IEP++EHY+ +VD L R G   +A E I ++P    A++  ALL  CR+ 
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIY 614

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            D E  + VAE++  LEP ++  YVLL+NI+A A +W++V   R ++ +K ++K+P    
Sbjct: 615 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSW 674

Query: 833 -------DLIFA----------KVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERAL 871
                  +L  +          K+E L+K    ++KE GY P T + L++ +E +KE AL
Sbjct: 675 IEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMAL 734

Query: 872 YYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHL 908
             HSEKLA A+GL++ PP   +   K                           +NRFHH 
Sbjct: 735 CGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 794

Query: 909 RDGMCPC 915
           ++G C C
Sbjct: 795 KNGYCSC 801



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 178/661 (26%), Positives = 307/661 (46%), Gaps = 112/661 (16%)

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGY 174
           DR +  +N+ +  +   G  N EN  E   +  +S  E+ T++S      +L+LC  S  
Sbjct: 63  DRQVTDYNAKILHFCQLG--NLENAMELVCMCQKSELETKTYSS------VLQLCAGSKS 114

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + VH       +  DE +   LV++Y+  G ++E + +FD M++++V LW  M+  
Sbjct: 115 LTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           YA+ G  +E   LF  +   G+                 GKR E   + +  KL     +
Sbjct: 175 YAKIGDFKESICLFKIMVEKGI----------------EGKRPESASELFD-KLC----D 213

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            +V+ WN  +SGY+  G     +E +  M+   +  D  T +  L   A +  L+LG+ +
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------ 384
           H   +KS F   +   N+L++MYSK G +                               
Sbjct: 274 HSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRS 333

Query: 385 -------------GLRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                        G++ D     S+L A   S SL  G    K +H +   N+  ++ FV
Sbjct: 334 DGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNG----KDVHDYIKANNMESNLFV 389

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             AL+D+Y + GSM  A  +F      D+ +WN MI                      GE
Sbjct: 390 CNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI----------------------GE 427

Query: 489 -RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + D  T+A  + AC  L  L++GK++H Y +++G+  D  V++ ++D+YVKCG +  A+
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ IP+ D V+WT MISG   +G  + A++ +++MR +G+ PDE +F  ++ A S   
Sbjct: 488 LLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 608 ALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNA 664
            LEQG +    ++K D + +P +     +VD+ ++ GN+  AY   + + +  +  +W A
Sbjct: 548 LLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           +L G   + + E   K+ E  +   +EP++  +  VL A  Y    +E +E    MREK 
Sbjct: 607 LLCGCRIYHDIELAEKVAE--RVFELEPENTGYY-VLLANIYAE--AEKWEEVKRMREKI 661

Query: 725 G 725
           G
Sbjct: 662 G 662



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 145/628 (23%), Positives = 244/628 (38%), Gaps = 157/628 (25%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ L+   QKS   + + SS    +L+    +  L  GK  H+ I +++   D  L   L
Sbjct: 85  AMELVCMCQKSELETKTYSS----VLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKL 140

Query: 95  MTMYSRCGSLVYARR--------------------------------------------- 109
           +++Y+ CG L   RR                                             
Sbjct: 141 VSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 110 ------LFDKMPDRDLISWNSILAAYAHSGEGNAENVTE-GFRLFRSLRESITFTSRLTL 162
                 LFDK+ DRD+ISWNS+++ Y  +G      +TE G  +++ +          T+
Sbjct: 201 PESASELFDKLCDRDVISWNSMISGYVSNG------LTERGLEIYKQMMYLGIDVDLATI 254

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             +L  C +SG +   + VH  A+K         S  L+++YSK G +  A  +F+ M E
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 314

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRH 277
           R+VV W  M+  Y  +G  +    L   + + G+  D  +   +L   +     D GK  
Sbjct: 315 RNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDV 374

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV--------- 328
            + ++A        N  SN+ + N  +  Y + G   GA   F  M+  ++         
Sbjct: 375 HDYIKA-------NNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE 427

Query: 329 -QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
            + DS T    L A A    L  G++IHG  L++G+ S   V N+L+++Y K G V GL 
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG-VLGLA 486

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
              F +         +P                    D    T +I  Y  +G   EA  
Sbjct: 487 RLLFDM---------IPS------------------KDLVSWTVMISGYGMHGYGNEA-- 517

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                    +AT+N                     M  +G   DE++  + + AC    +
Sbjct: 518 ---------IATFN--------------------EMRDAGIEPDEVSFISILYACSHSGL 548

Query: 508 LKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTM 564
           L+QG +   Y MK+ F ++  +   + ++D+  + G +  A      +P APD   W  +
Sbjct: 549 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGAL 607

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           + GC           IYH + L+  V +
Sbjct: 608 LCGC----------RIYHDIELAEKVAE 625


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 263/919 (28%), Positives = 418/919 (45%), Gaps = 162/919 (17%)

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           RS ++   +    TLA LL+ C+    +     +H   +K GL  ++ +   LV +YSK 
Sbjct: 13  RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL---HRSGLCPDDESVQ 264
             + +A   F  ++ R +  W  ++ A +       VF L+  +    R+   P+  ++ 
Sbjct: 73  RSLDDANAAFSALRSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNKLTII 129

Query: 265 CVLGVIS--DLGKRHEEQVQAYAIKLLLYNN------NSNVVLWNKKLSGYLQVGDNHGA 316
            VLG I+  D       +  + A   +++++        ++ +    L  Y + G    A
Sbjct: 130 AVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESA 189

Query: 317 IECFVNMIRSNVQY-DSVTFLVALAAVAGTD----------------------------- 346
           +E F     S +Q  D + +  A+ A AG D                             
Sbjct: 190 LEVF-----SRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAIL 244

Query: 347 -------NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------- 383
                  +L L + IH    + GF   V+V  +L+ MY + G V                
Sbjct: 245 SSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHV 304

Query: 384 -----------C----------------GLRTDQFTLASVLRAS-SSLPEGLHLSKQIHV 415
                      C                G R ++ T  + L+A+ SS  + L  S  +H 
Sbjct: 305 SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHG 364

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                    D  V TAL+ +Y   G++  A   F+     ++ +WNAM+  Y  +  + +
Sbjct: 365 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRARE 424

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGIL 534
           A+ELF+ M       ++++    +   GC   + + + +HA  + +G F  +  +++G++
Sbjct: 425 AMELFAAMKRQSLAPNKVSYLAVL---GCCEDVSEARSIHAEVVGNGLFAQESSIANGVV 481

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL--ALSIYHQMRLSGVVPD 592
            M+ + G++ +A + F+     D V+W T ++    +  EDL  A++ ++ M+  G  PD
Sbjct: 482 RMFARSGSLEEAVAAFDATVVKDSVSWNTKVAAL--SAREDLHGAITAFYTMQHEGFRPD 539

Query: 593 EFTFAILVKASSCLTALEQGRQIHANL-IKLDCSSDPFVGISLVDMYAKCG-NIEDAYIL 650
           +FT   +V   + L  LE GR I   L   ++   D  V  ++++M AKCG ++++   L
Sbjct: 540 KFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERL 599

Query: 651 FKQM--DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYT 707
           F +M  D ++ V WN M+   AQHG+G + LKLF  M+    V PDS TF+ VLS CS+ 
Sbjct: 600 FARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHA 659

Query: 708 GLVSEAYENFHLMREKYGIEPE-VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
           GLV +    F L RE  GIE + VEHY+ LVD LGR G  +EA + I  MP  A + +  
Sbjct: 660 GLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWT 719

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
           +LLGAC   GD E G+  A   + L   DS  YV+LSNI+AAA +W+D    R +M  + 
Sbjct: 720 SLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERR 779

Query: 827 VKK------------------------DPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
           VKK                          +D I+A++E L   I+E GYVPDT  VL DV
Sbjct: 780 VKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDV 839

Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY 901
           EEE+KE+ L+YHSEKLA A+GLIS P    I                     ++ +E   
Sbjct: 840 EEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAV 899

Query: 902 --ANRFHHL-RDGMCPCAD 917
              NRFHH  +DG C C D
Sbjct: 900 RDCNRFHHFGKDGECSCGD 918



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 244/532 (45%), Gaps = 51/532 (9%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + + +IL      S L L +S HAR+     + D  +   L+TMY RCGS+  +  +F+ 
Sbjct: 238 ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEA 297

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           M  R+ +SWN+++AA+A  G  +A      F ++  +++     +++T    LK   SS 
Sbjct: 298 MAVRNHVSWNAMIAAFAQCGHRSA-----AFAIYWRMQQEGFRPNKITFVTALKAACSSS 352

Query: 174 Y--VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +  S  +HG+    GL  D  V  ALV +Y   G I  A+  FD +  +++V W  M
Sbjct: 353 SQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 412

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLY 291
           L AY +NG   E   LF  + R  L P+  S   VLG   D+ +     + A  +   L+
Sbjct: 413 LTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE--ARSIHAEVVGNGLF 470

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
              S++       +G +++    G++E  V    + V  DSV++   +AA++  ++L   
Sbjct: 471 AQESSIA------NGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDL--- 521

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
              HG    + FY+          M  +     G R D+FTL SV+   + L   L L +
Sbjct: 522 ---HGAI--TAFYT----------MQHE-----GFRPDKFTLVSVVDVCADLGT-LELGR 560

Query: 412 QIHVH-AIKNDTVADSFVSTALIDVYCRNG-SMAEAEYLFEN--KDGFDLATWNAMIFGY 467
            I    +   +   D  V++A++++  + G S+ E E LF     D  DL  WN MI  Y
Sbjct: 561 SIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAY 620

Query: 468 ILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS---GF 523
               +  KAL+LF  M   S  R D  T  + +  C    +++ G  +H + +     G 
Sbjct: 621 AQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGI 678

Query: 524 ELDLCVS-SGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGE 573
           E       + ++D+  + G + +A+     +P P D V WT+++  C   G+
Sbjct: 679 EQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGD 730



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 174/740 (23%), Positives = 306/740 (41%), Gaps = 109/740 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR  I  +DL  G+  H +I+      +  L N L+ MYS+C SL  A   F  +  R 
Sbjct: 30  LLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRG 89

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG----- 173
           + +WN+++AA     + +   V + +   +    +    ++LT+  +L   ++SG     
Sbjct: 90  IATWNTLIAA-----QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLG-AIASGDPSSS 143

Query: 174 ------YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
                  +  +  VH       L  D FV+ AL++ Y K G +  A  +F  +Q  D++ 
Sbjct: 144 SSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLIC 203

Query: 228 WKVMLRAYAENGFGEEVFHLFV-DLHRSGLCPDDESVQCVLGVISD---------LGKRH 277
           W   + A A N    +   L V  +   GL P+  S   +L    D         +  R 
Sbjct: 204 WNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV 263

Query: 278 EE-----QVQAYAIKLLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAI 317
           EE      V      + +Y    +V               V WN  ++ + Q G    A 
Sbjct: 264 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 323

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ--IHGTTLKSGFYSAVIVGNSLIN 375
             +  M +   + + +TF+ AL A   + + +LG+   +HG    +G    V+VG +L+ 
Sbjct: 324 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 383

Query: 376 MYSKMGCV---------------------------CGLRTDQFTLASVLRASSSLP---- 404
           MY   G +                            G   +   L + ++  S  P    
Sbjct: 384 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVS 443

Query: 405 --------EGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
                   E +  ++ IH   + N   A +S ++  ++ ++ R+GS+ EA   F+     
Sbjct: 444 YLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVK 503

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D  +WN  +       + H A+  F  M   G R D+ T+ + V  C  L  L+ G+ + 
Sbjct: 504 DSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQ 563

Query: 516 AYAMKS-GFELDLCVSSGILDMYVKCGAMVD-AQSIFNDIP--APDDVAWTTMISGCVDN 571
                +   E D+ V+S +++M  KCG+ VD  + +F  +P    D VAW TMI+    +
Sbjct: 564 QQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQH 623

Query: 572 GEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSD 627
           G    AL ++  M + S V PD  TF  ++   S    +E G  IH   +    L     
Sbjct: 624 GHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQ 681

Query: 628 PFVGIS-LVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN---GEETLKLF 682
           P    + LVD+  + G + +A    ++M +  ++V+W ++L   + +G+   GE   + F
Sbjct: 682 PVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAF 741

Query: 683 EDMKAHGVEPDSVTFIGVLS 702
            ++       DSV ++ VLS
Sbjct: 742 IEL----YRSDSVGYV-VLS 756


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/561 (34%), Positives = 306/561 (54%), Gaps = 50/561 (8%)

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L +G     QI +  +K D +     S  LI++Y + GS+  A  +F+      L +WN 
Sbjct: 80  LLQGKACHAQILLMGLKTDLL----TSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNT 135

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI     +   ++AL+L   M   G    E TI++ + AC     L + + +HA+A+K+ 
Sbjct: 136 MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAA 195

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            +L++ V++ +LD+Y KCG M DA  +F  +P    V W++M +G V N   + AL+++ 
Sbjct: 196 MDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFR 255

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +   +G+  D+F  + ++ A + L A+ +G+Q++A L K    S+ FV  SL+DMYAKCG
Sbjct: 256 KAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCG 315

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            IE++Y +F+ ++ RN VLWNAM+ GL++H    E + LFE M+  G+ P+ VTF+ VLS
Sbjct: 316 GIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLS 375

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           AC + GLV +  + F LM +++ + P V HYS +VD L RAG+  EA +LI  +PF ASA
Sbjct: 376 ACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASA 435

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
           SM  +LL +CR  G+ E  +  A+KL  +EP +S  Y+LLSN++AA  +WD+V   R  +
Sbjct: 436 SMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLL 495

Query: 823 KRKNVKK----------DPADL-------------IFAKVEGLIKRIKEGGYVPDTDFVL 859
           K  +VKK          D   L             I++K+  ++  +++ GY  +T   L
Sbjct: 496 KESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDL 555

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA----------------- 902
             V E  K+  L +HSEKLA   GL+  PP++ I   K                      
Sbjct: 556 HQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRD 615

Query: 903 ------NRFHHLRDGMCPCAD 917
                 NRFHH ++G C C D
Sbjct: 616 VIVRDTNRFHHFKNGCCSCGD 636



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 133/251 (52%), Gaps = 1/251 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           +K C    +L QGK  HA  +  G + DL  S+ +++MY KCG++  A+ +F+++P+   
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+W TMI     NGEE+ AL +  QM+  G    EFT + ++ A +   AL + + +HA 
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            IK     + FV  +L+D+YAKCG ++DA  +F+ M  R+ V W++M  G  Q+   E+ 
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L LF      G++ D      V+ AC+    + E  +  + +  K G    +   S L+D
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG-KQVNALLSKSGFCSNIFVASSLID 309

Query: 739 ALGRAGRTKEA 749
              + G  +E+
Sbjct: 310 MYAKCGGIEES 320



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 34/324 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+       LL GK+ HA+IL      D   +N L+ MYS+CGS+ +AR++FD+MP R 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SWN+++ +   +GE N     E   L   ++   T  S  T++ +L  C +   +   
Sbjct: 130 LVSWNTMIGSLTQNGEEN-----EALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H +A+K  +  + FV+ AL+++Y+K G +++A  +F+ M +R VV W  M   Y +N
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN---- 293
              E+   LF     +GL  D   +  V+   + L    E +QV A   K    +N    
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVA 304

Query: 294 ------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     NVVLWN  +SG  +   +   +  F  M +  + 
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQ 353
            + VTF+  L+A      +  GQ+
Sbjct: 365 PNDVTFVSVLSACGHMGLVKKGQK 388



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 144/327 (44%), Gaps = 46/327 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++V WN  +    Q G+ + A++  + M R    +   T    L A A    L+  Q +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG----CVC--------------------------- 384
              +K+     V V  +L+++Y+K G     VC                           
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       GL+ DQF ++SV+ A + L   +   KQ++    K+   ++ FV+++L
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIE-GKQVNALLSKSGFCSNIFVASSL 307

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G + E+  +F + +  ++  WNAMI G      S + + LF  M   G   ++
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T  + + ACG + ++K+G++      K      ++   S ++D   + G + +A  + +
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 552 DIPAPDDVA-WTTMISGCVDNGEEDLA 577
            +P     + W ++++ C  +G  +LA
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELA 454



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           ++ GK  +A +  S    + F+ ++L+ MY++CG +  + ++F  +  R+++ WN+++  
Sbjct: 282 MIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMI-- 339

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              SG        E   LF  +++     + +T   +L  C   G V   +       K 
Sbjct: 340 ---SGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKE 396

Query: 189 -GLVWDEFVSGALVNIYSKFGKIREA 213
             L  + F    +V+  S+ G+I EA
Sbjct: 397 HHLAPNVFHYSCMVDTLSRAGQIFEA 422


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 213/648 (32%), Positives = 320/648 (49%), Gaps = 84/648 (12%)

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
           D +     I G +L     +AV   N+++  +S           + TL ++L+ SSS   
Sbjct: 99  DGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS-------NLTRVTLMTMLKLSSSNGH 151

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF---------- 455
            + L KQIH   IK    +   V + L+D+Y + G +++A+ +F   D            
Sbjct: 152 -VSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMG 210

Query: 456 --------------------DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
                               D  +W+AMI G   +    +A+E F  M   G ++D+   
Sbjct: 211 GLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPF 270

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + + ACG L  +  G+Q+HA  +++  +  + V S ++DMY KC  +  A+++F+ +  
Sbjct: 271 GSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 330

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            + V+WT M+ G    G    A+ I+  M+ SG+ PD +T    + A + +++LE+G Q 
Sbjct: 331 KNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQF 390

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H   I         V  SLV +Y KCG+I+D+  LF +M++R+ V W AM+   AQ G  
Sbjct: 391 HGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRA 450

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E ++LF+ M   G++PD VT  GV+SACS  GLV +    F LM  +YGI P   HYS 
Sbjct: 451 VEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSC 510

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           ++D   R+GR +EA   I  MPF   A     LL ACR +G+ E GKW AE L+ L+P  
Sbjct: 511 MIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHH 570

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------A 832
            + Y LLS+I+A+  +WD V   R  MK KNV+K+P                       +
Sbjct: 571 PAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYS 630

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           D I+AK+E L ++I + GY PDT FV  DVEE  K + L  HSE+LA A+GLI  P    
Sbjct: 631 DQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLP 690

Query: 893 I---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           I                     ++ +E L   A RFH  +DG C C D
Sbjct: 691 IRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGD 738



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 245/608 (40%), Gaps = 168/608 (27%)

Query: 71  LGKSTHARILNSSQI-----PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           LG S H ++++ + I     P+ FL NN++  Y+   S +YARR+FD +P  +L SWN++
Sbjct: 16  LGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNL 75

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSL--RESITFT-------------------------- 157
           L AY+ SG     +++E  R F  L  R+ +T+                           
Sbjct: 76  LLAYSKSG-----HLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDF 130

Query: 158 ----SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               +R+TL  +LKL  S+G+V   + +HG  +K+G      V   L+++YSK G I +A
Sbjct: 131 SSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDA 190

Query: 214 KFLFDGMQERDVVL------------------------------WKVMLRAYAENGFGEE 243
           K +F G+ +R+ V+                              W  M++  A+NG  +E
Sbjct: 191 KKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKE 250

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN--------- 293
               F ++   GL  D      VL     LG  ++  Q+ A  I+  L ++         
Sbjct: 251 AIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALID 310

Query: 294 -------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                                NVV W   + GY Q G    A++ F++M RS +  D  T
Sbjct: 311 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYT 370

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
              A++A A   +L  G Q HG  + +G    + V NSL+ +Y K    CG   D   L 
Sbjct: 371 LGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGK----CGDIDDSTRLF 426

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           + +                         V D    TA++  Y + G   E          
Sbjct: 427 NEM------------------------NVRDEVSWTAMVSAYAQFGRAVE---------- 452

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                                A++LF  M   G + D +T+   + AC    ++++G++ 
Sbjct: 453 ---------------------AIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRY 491

Query: 515 HAYAMKSGFELDLCVSSG----ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
               +    E  +  S+G    ++D++ + G + +A    N +P  PD + WTT++S C 
Sbjct: 492 FELMIN---EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACR 548

Query: 570 DNGEEDLA 577
           + G  ++ 
Sbjct: 549 NKGNLEIG 556



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 232/488 (47%), Gaps = 27/488 (5%)

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF---GEEVFHLFVDLHRSGLCPDD 260
           YSK G + E +  F+ + +RD V W V++  Y+ +G      + ++  +    S L    
Sbjct: 79  YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNL--TR 136

Query: 261 ESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
            ++  +L + S  G     +Q+    IKL      S +++ +  L  Y +VG    A + 
Sbjct: 137 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF---ESYLLVGSPLLDMYSKVGCISDAKKV 193

Query: 320 FVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG-------N 371
           F  +  R+ V Y+  T +  L A    ++    Q   G    S  +SA+I G        
Sbjct: 194 FYGLDDRNTVMYN--TLMGGLLACGMIEDAL--QLFRGMEKDSVSWSAMIKGLAQNGMEK 249

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
             I  + +M  + GL+ DQ+   SVL A   L   ++  +QIH   I+ +     +V +A
Sbjct: 250 EAIECFREMK-IEGLKMDQYPFGSVLPACGGLG-AINDGRQIHACIIRTNLQDHIYVGSA 307

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LID+YC+   +  A+ +F+     ++ +W AM+ GY  +  + +A+++F  M  SG   D
Sbjct: 308 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPD 367

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             T+  A+ AC  +  L++G Q H  A+ +G    + VS+ ++ +Y KCG + D+  +FN
Sbjct: 368 HYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           ++   D+V+WT M+S     G    A+ ++ +M   G+ PD  T   ++ A S    +E+
Sbjct: 428 EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487

Query: 612 GRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVG 668
           G++    +I  +    P  G    ++D++++ G IE+A      M  R + + W  +L  
Sbjct: 488 GQRYFELMIN-EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSA 546

Query: 669 LAQHGNGE 676
               GN E
Sbjct: 547 CRNKGNLE 554



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 11/282 (3%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA I+ ++     ++ + L+ MY +C  L YA+ +FD+M  ++++SW +++  Y  
Sbjct: 286 GRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 345

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        E  ++F  ++ S       TL   +  C +   +      HG A+  GL+
Sbjct: 346 TGRAG-----EAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLI 400

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               VS +LV +Y K G I ++  LF+ M  RD V W  M+ AYA+ G   E   LF  +
Sbjct: 401 HYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKM 460

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
            + GL PD  ++  V+   S  G    E+ Q Y  +L++  N   +V  N   S  + + 
Sbjct: 461 VQLGLKPDGVTLTGVISACSRAGL--VEKGQRY-FELMI--NEYGIVPSNGHYSCMIDLF 515

Query: 312 DNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQ 352
              G IE  +  I     + D++ +   L+A     NL +G+
Sbjct: 516 SRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGK 557



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 163/396 (41%), Gaps = 67/396 (16%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
           FSS+ +     ++L+ + S   + LGK  H +++         + + L+ MYS+ G +  
Sbjct: 130 FSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISD 189

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSG-----------------------EGNAEN--VT 141
           A+++F  + DR+ + +N+++      G                       +G A+N    
Sbjct: 190 AKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEK 249

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E    FR ++       +     +L  C   G +     +H   ++  L    +V  AL+
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y K   +  AK +FD M++++VV W  M+  Y + G   E   +F+D+ RSG+ PD  
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369

Query: 262 SVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYN------------NNS 295
           ++   +   +++    E  Q    AI              + LY             N  
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM 429

Query: 296 NV---VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           NV   V W   +S Y Q G    AI+ F  M++  ++ D VT    ++A +    +  GQ
Sbjct: 430 NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ 489

Query: 353 QI-------HGTTLKSGFYSAVIVGNSLINMYSKMG 381
           +        +G    +G YS       +I+++S+ G
Sbjct: 490 RYFELMINEYGIVPSNGHYSC------MIDLFSRSG 519



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH-QMRLSGVVP 591
           +L  Y K G + + +  F  +P  D V W  +I G   +G    A+  Y+  M+      
Sbjct: 75  LLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNL 134

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
              T   ++K SS    +  G+QIH  +IKL   S   VG  L+DMY+K G I DA  +F
Sbjct: 135 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVF 194

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             +D RNTV++N ++ GL   G  E+ L+LF      G+E DSV++  ++   +  G+  
Sbjct: 195 YGLDDRNTVMYNTLMGGLLACGMIEDALQLFR-----GMEKDSVSWSAMIKGLAQNGMEK 249

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           EA E F  M+ + G++ +   +  ++ A G  G   +  ++
Sbjct: 250 EAIECFREMKIE-GLKMDQYPFGSVLPACGGLGAINDGRQI 289



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           ++  +K    L A    + IH N+I+     + F+  ++V  YA   +   A  +F  + 
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             N   WN +L+  ++ G+  E  + FE +     + D VT+  ++   S +GLV  A +
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVK 121

Query: 716 NFHLMREKY 724
            ++ M + +
Sbjct: 122 AYNTMMKDF 130


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 341/725 (47%), Gaps = 105/725 (14%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A K+ +  +  NVV +   +SG+ +      A+E F  M  S ++ +  +F+  L     
Sbjct: 124 AYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIR 183

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---------------------- 382
             +L LG Q+H   +K GF +   V N+L+ +Y K G                       
Sbjct: 184 LLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTV 243

Query: 383 ----------------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                 + G R D FTL+++L A+  L     + ++IH H IK 
Sbjct: 244 ISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLAS--MVGREIHAHVIKI 301

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW-------------------- 460
              ++  V  ALI  Y + GS+     LFE     D+ TW                    
Sbjct: 302 GFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVF 361

Query: 461 -----------NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                      NA++ G+  +    KAL  F  M   G  L + T+   + ACG L+  K
Sbjct: 362 DKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAK 421

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISG 567
             KQ+H + +K GF  + C+ + +LDM  +CG M DAQ +F+         + WT+MI G
Sbjct: 422 ISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICG 481

Query: 568 CVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
              N + + A+S++ Q +L G +V D+     ++     L   E G+QIH + +K    S
Sbjct: 482 YARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLS 541

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D  VG S++ MY+KC N++DA  +F  M   + V WN ++ G   H  G+E L ++  M+
Sbjct: 542 DLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKME 601

Query: 687 AHGVEPDSVTFIGVLSACSYTG--LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             G++PD+VTF+ ++SA  +T   LV      F  M+  Y I+P VEHY+ LV  LG  G
Sbjct: 602 KAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWG 661

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
             +EA E+I  MP E  AS+ RALL ACR+  +T  GK  A+ L+A++P D S Y+L+SN
Sbjct: 662 LLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSN 721

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEG 841
           +++A  +W      R EM+ K  +K P                       A  I + +E 
Sbjct: 722 LYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLEL 781

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY 901
           LI    + GYVPDT FVL +VEE +K+  L+YHS K+A  YGL+ T P   I   K  L 
Sbjct: 782 LIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILL 841

Query: 902 ANRFH 906
               H
Sbjct: 842 CGDCH 846



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 141/579 (24%), Positives = 238/579 (41%), Gaps = 129/579 (22%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + +IL   I   DL LG   HA ++    +   F++N LM +Y +CG L    +LFD+MP
Sbjct: 174 FVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMP 233

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTE-GFRLFRSLRESITF-TSRLTLAPLLKLCLSSG 173
            RD+ SWN+++++         E + E  F LFR +R    F     TL+ +L       
Sbjct: 234 HRDIASWNTVISSVV------KEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 287

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   E +H + +KIG   +  V  AL+  Y+K G I+    LF+ M+ RDV+ W  M+ 
Sbjct: 288 SMVGRE-IHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 346

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
           AY E G                              ++DL     +++ A          
Sbjct: 347 AYMEFG------------------------------LTDLALEVFDKMPA---------- 366

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             N + +N  LSG+ Q G+   A+  F  M+   V+    T    L A        + +Q
Sbjct: 367 -RNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQ 425

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG------------------------CVCG---- 385
           IHG  LK GF S   +  +L++M ++ G                         +CG    
Sbjct: 426 IHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARN 485

Query: 386 ------------------LRTDQFTLASVLRASSSLPEGLH-LSKQIHVHAIKNDTVADS 426
                             +  D+    +VL    +L    H + KQIH HA+K+  ++D 
Sbjct: 486 AQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTL--AFHEMGKQIHCHALKSGFLSDL 543

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
            V  ++I +Y +  +M +A  +F      D+ +WN +I G++L     +AL ++S M  +
Sbjct: 544 GVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKA 603

Query: 487 GERLDEITIATAVKA-----------CGCLLMLKQGKQMHAYAMKSGFELDLCVSS---- 531
           G + D +T    + A           C  L +          +MK+ + +D  V      
Sbjct: 604 GIKPDTVTFVLIISAYRHTNSNLVDNCRRLFL----------SMKTIYHIDPTVEHYTSL 653

Query: 532 -GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            G+L  +   G + +A+ + N +P  P+   W  ++  C
Sbjct: 654 VGVLGYW---GLLEEAEEMINKMPIEPEASVWRALLDAC 689


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 341/725 (47%), Gaps = 105/725 (14%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A K+ +  +  NVV +   +SG+ +      A+E F  M  S ++ +  +F+  L     
Sbjct: 142 AYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIR 201

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---------------------- 382
             +L LG Q+H   +K GF +   V N+L+ +Y K G                       
Sbjct: 202 LLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTV 261

Query: 383 ----------------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                 + G R D FTL+++L A+  L     + ++IH H IK 
Sbjct: 262 ISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLAS--MVGREIHAHVIKI 319

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW-------------------- 460
              ++  V  ALI  Y + GS+     LFE     D+ TW                    
Sbjct: 320 GFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVF 379

Query: 461 -----------NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                      NA++ G+  +    KAL  F  M   G  L + T+   + ACG L+  K
Sbjct: 380 DKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAK 439

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISG 567
             KQ+H + +K GF  + C+ + +LDM  +CG M DAQ +F+         + WT+MI G
Sbjct: 440 ISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICG 499

Query: 568 CVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
              N + + A+S++ Q +L G +V D+     ++     L   E G+QIH + +K    S
Sbjct: 500 YARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLS 559

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D  VG S++ MY+KC N++DA  +F  M   + V WN ++ G   H  G+E L ++  M+
Sbjct: 560 DLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKME 619

Query: 687 AHGVEPDSVTFIGVLSACSYTG--LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             G++PD+VTF+ ++SA  +T   LV      F  M+  Y I+P VEHY+ LV  LG  G
Sbjct: 620 KAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWG 679

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
             +EA E+I  MP E  AS+ RALL ACR+  +T  GK  A+ L+A++P D S Y+L+SN
Sbjct: 680 LLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSN 739

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEG 841
           +++A  +W      R EM+ K  +K P                       A  I + +E 
Sbjct: 740 LYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLEL 799

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY 901
           LI    + GYVPDT FVL +VEE +K+  L+YHS K+A  YGL+ T P   I   K  L 
Sbjct: 800 LIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILL 859

Query: 902 ANRFH 906
               H
Sbjct: 860 CGDCH 864



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/579 (24%), Positives = 238/579 (41%), Gaps = 129/579 (22%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + +IL   I   DL LG   HA ++    +   F++N LM +Y +CG L    +LFD+MP
Sbjct: 192 FVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMP 251

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTE-GFRLFRSLRESITF-TSRLTLAPLLKLCLSSG 173
            RD+ SWN+++++         E + E  F LFR +R    F     TL+ +L       
Sbjct: 252 HRDIASWNTVISSVV------KEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 305

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   E +H + +KIG   +  V  AL+  Y+K G I+    LF+ M+ RDV+ W  M+ 
Sbjct: 306 SMVGRE-IHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 364

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
           AY E G                              ++DL     +++ A          
Sbjct: 365 AYMEFG------------------------------LTDLALEVFDKMPA---------- 384

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             N + +N  LSG+ Q G+   A+  F  M+   V+    T    L A        + +Q
Sbjct: 385 -RNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQ 443

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG------------------------CVCG---- 385
           IHG  LK GF S   +  +L++M ++ G                         +CG    
Sbjct: 444 IHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARN 503

Query: 386 ------------------LRTDQFTLASVLRASSSLPEGLH-LSKQIHVHAIKNDTVADS 426
                             +  D+    +VL    +L    H + KQIH HA+K+  ++D 
Sbjct: 504 AQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTL--AFHEMGKQIHCHALKSGFLSDL 561

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
            V  ++I +Y +  +M +A  +F      D+ +WN +I G++L     +AL ++S M  +
Sbjct: 562 GVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKA 621

Query: 487 GERLDEITIATAVKA-----------CGCLLMLKQGKQMHAYAMKSGFELDLCVSS---- 531
           G + D +T    + A           C  L +          +MK+ + +D  V      
Sbjct: 622 GIKPDTVTFVLIISAYRHTNSNLVDNCRRLFL----------SMKTIYHIDPTVEHYTSL 671

Query: 532 -GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            G+L  +   G + +A+ + N +P  P+   W  ++  C
Sbjct: 672 VGVLGYW---GLLEEAEEMINKMPIEPEASVWRALLDAC 707


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 197/554 (35%), Positives = 296/554 (53%), Gaps = 48/554 (8%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H   ++     + FV++ L D+Y + G ++EA  +F+     D   W AMI GY  + 
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 472 NSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           +   A+  F  M   G    D+    + + A G L      K +H    K+GFEL++ V 
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 181

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           + ++DMY K   +  A  +    P   + V+ T+MI G ++    + AL IY ++R  GV
Sbjct: 182 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 241

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+EFTF+ ++K  +    LEQG Q+HA +IK D   D FVG +LVDMY KCG I  +  
Sbjct: 242 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 301

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           LF +++ R  + WNA++   AQHG+G E ++ F+ M   G+ P+ + F+ +L+ACS+ GL
Sbjct: 302 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 361

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E  + F+ M+E +GIEP+ EHYS ++D  GRAGR  EA + I  MP + +A    +LL
Sbjct: 362 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 421

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR++G  E G+  A+ LM LEP ++  +V LS I+A+  QW+DV + R  M+   +KK
Sbjct: 422 GACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKK 481

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
            P                          I+ K+E L  RIKE GY+PDT F+  ++E+  
Sbjct: 482 LPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIA 541

Query: 867 KERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------N 903
           KER L YHSE++A A+ LIS P +  I+  K                            +
Sbjct: 542 KERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNS 601

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  +G C C D
Sbjct: 602 RFHHFVNGRCSCGD 615



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 198/500 (39%), Gaps = 103/500 (20%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS--LRESITFTSRLTLAPLLKLCLS 171
           MP R+ +SW ++++       G ++N+     L     +R +    +R  L+   +   +
Sbjct: 1   MPRRNAVSWTTLVS-------GLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 53

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
            G       +H   +++G   + FV+  L ++YSK G + EA  +FD M ++D V W  M
Sbjct: 54  LGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAM 113

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----GVISD--LGKRHEEQVQAYA 285
           +  YA+NG  E     F D+ R GL   D+ V C +    G + D  L K     V    
Sbjct: 114 IDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAG 173

Query: 286 IKLLLYNNNS-------------------------NVVLWNKKLSGYLQVGDNHGAIECF 320
            +L +   N+                         NVV     + GY++      A+  +
Sbjct: 174 FELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIY 233

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           V + R  V+ +  TF   +   A    L  G Q+H   +K+       VG++L++MY K 
Sbjct: 234 VELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK- 292

Query: 381 GCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
              CGL                    + LS Q+                           
Sbjct: 293 ---CGL--------------------ISLSMQL--------------------------- 302

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
              E EY        D+A WNA+I  +    +  +A++ F  M  SG R + I   + + 
Sbjct: 303 -FNEIEYR------TDIA-WNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354

Query: 501 ACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APD 557
           AC    ++ +G + + Y+MK   G E      S I+D Y + G + +A    +++P  P+
Sbjct: 355 ACSHAGLVDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPN 413

Query: 558 DVAWTTMISGCVDNGEEDLA 577
              W +++  C   G ++L 
Sbjct: 414 AYGWCSLLGACRMRGSKELG 433



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 6/208 (2%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + V+WTT++SG   N     AL+ +  MR +GV P  F  +   +A++ L A   G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
            Q+H   ++L   ++ FV  +L DMY+KCG + +A  +F QM  ++ V W AM+ G A++
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 673 GNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAY--ENFHLMREKYGIEPE 729
           G+ E  +  F DMK  G V  D   F  VLSA   +G + + +  ++ H    K G E E
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELE 177

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMP 757
           V   + L+D   ++   + A  ++   P
Sbjct: 178 VAVRNALIDMYAKSMDVESASRVLKIDP 205



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 43/318 (13%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F+ +NL  MYS+CG L  A R+FD+MP +D ++W +++  YA +G   A  ++     FR
Sbjct: 77  FVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLS-----FR 131

Query: 149 SL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
            + RE +    +     +L         W S+++H    K G   +  V  AL+++Y+K 
Sbjct: 132 DMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKS 191

Query: 208 GKIREA-KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ-- 264
             +  A + L       +VV    M+  Y E    EE   ++V+L R G+ P++ +    
Sbjct: 192 MDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSM 251

Query: 265 ---CVLGVISDLGKRHEEQV----------------------QAYAIKLLLYN--NNSNV 297
              C +  + + G +   QV                         ++ + L+N       
Sbjct: 252 IKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD 311

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG------ 351
           + WN  ++ + Q G    AI+ F  MI S ++ + + F+  L A +    ++ G      
Sbjct: 312 IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYS 371

Query: 352 -QQIHGTTLKSGFYSAVI 368
            ++ HG   K   YS +I
Sbjct: 372 MKEAHGIEPKEEHYSCII 389



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 4/230 (1%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L  +    D  L KS H  +  +    +  + N L+ MY++   +  A R+    P  
Sbjct: 148 SVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPG- 206

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
               WN +       G    + V E   ++  LR      +  T + ++K C     +  
Sbjct: 207 ---GWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQ 263

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H   +K  L+ D FV   LV++Y K G I  +  LF+ ++ R  + W  ++  +A+
Sbjct: 264 GAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQ 323

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
           +G G E    F  +  SG+ P+  +   +L   S  G   E     Y++K
Sbjct: 324 HGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMK 373


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 197/554 (35%), Positives = 296/554 (53%), Gaps = 48/554 (8%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H   ++     + FV++ L D+Y + G ++EA  +F+     D   W AMI GY  + 
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 472 NSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           +   A+  F  M   G    D+    + + A G L      K +H    K+GFEL++ V 
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 262

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           + ++DMY K   +  A  +    P   + V+ T+MI G ++    + AL IY ++R  GV
Sbjct: 263 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 322

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+EFTF+ ++K  +    LEQG Q+HA +IK D   D FVG +LVDMY KCG I  +  
Sbjct: 323 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 382

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           LF +++ R  + WNA++   AQHG+G E ++ F+ M   G+ P+ + F+ +L+ACS+ GL
Sbjct: 383 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 442

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E  + F+ M+E +GIEP+ EHYS ++D  GRAGR  EA + I  MP + +A    +LL
Sbjct: 443 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 502

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR++G  E G+  A+ LM LEP ++  +V LS I+A+  QW+DV + R  M+   +KK
Sbjct: 503 GACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKK 562

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
            P                          I+ K+E L  RIKE GY+PDT F+  ++E+  
Sbjct: 563 LPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIA 622

Query: 867 KERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------N 903
           KER L YHSE++A A+ LIS P +  I+  K                            +
Sbjct: 623 KERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNS 682

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  +G C C D
Sbjct: 683 RFHHFVNGRCSCGD 696



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 229/557 (41%), Gaps = 104/557 (18%)

Query: 58  SILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           S+L+      DL  G+  HAR +L+ +     FL N+L+TMYS C  L  A RLF  MP 
Sbjct: 25  SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRS--LRESITFTSRLTLAPLLKLCLSSGY 174
           R+ +SW ++++       G ++N+     L     +R +    +R  L+   +   + G 
Sbjct: 85  RNAVSWTTLVS-------GLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA 137

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
                 +H   +++G   + FV+  L ++YSK G + EA  +FD M ++D V W  M+  
Sbjct: 138 PLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDG 197

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----GVISD--LGKRHEEQVQAYAIKL 288
           YA+NG  E     F D+ R GL   D+ V C +    G + D  L K     V     +L
Sbjct: 198 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 257

Query: 289 LLYNNNS-------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            +   N+                         NVV     + GY++      A+  +V +
Sbjct: 258 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 317

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            R  V+ +  TF   +   A    L  G Q+H   +K+       VG++L++MY K    
Sbjct: 318 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK---- 373

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           CGL                    + LS Q+                              
Sbjct: 374 CGL--------------------ISLSMQL----------------------------FN 385

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           E EY        D+A WNA+I  +    +  +A++ F  M  SG R + I   + + AC 
Sbjct: 386 EIEYR------TDIA-WNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 438

Query: 504 CLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
              ++ +G + + Y+MK   G E      S I+D Y + G + +A    +++P  P+   
Sbjct: 439 HAGLVDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 497

Query: 561 WTTMISGCVDNGEEDLA 577
           W +++  C   G ++L 
Sbjct: 498 WCSLLGACRMRGSKELG 514



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 166/355 (46%), Gaps = 5/355 (1%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVH-AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           LAS+L++     + L   + +H    +     A +F++  LI +Y     +A A  LF  
Sbjct: 23  LASLLQSCGRAGD-LRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAA 81

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               +  +W  ++ G   +     AL  F+ M  +G       +++A +A   L     G
Sbjct: 82  MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 141

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
            Q+H   ++ GF+ +L V+S + DMY KCG + +A  +F+ +P  D VAWT MI G   N
Sbjct: 142 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 201

Query: 572 GEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           G  + A+  +  M+  G+V  D+  F  ++ AS  L      + IH  + K     +  V
Sbjct: 202 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 261

Query: 631 GISLVDMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
             +L+DMYAK  ++E A  + K      N V   +M+ G  +    EE L ++ +++  G
Sbjct: 262 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 321

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           VEP+  TF  ++  C+   L+ +  +  H    K  +  +    S LVD  G+ G
Sbjct: 322 VEPNEFTFSSMIKGCAMQALLEQGAQ-LHAQVIKTDLIRDSFVGSTLVDMYGKCG 375



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 141/269 (52%), Gaps = 7/269 (2%)

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFN 551
           + +A+ +++CG    L++G+ +HA  + SG       +++ ++ MY  C  +  A  +F 
Sbjct: 21  VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P  + V+WTT++SG   N     AL+ +  MR +GV P  F  +   +A++ L A   
Sbjct: 81  AMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLP 140

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G Q+H   ++L   ++ FV  +L DMY+KCG + +A  +F QM  ++ V W AM+ G A+
Sbjct: 141 GAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 200

Query: 672 HGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAY--ENFHLMREKYGIEP 728
           +G+ E  +  F DMK  G V  D   F  VLSA   +G + + +  ++ H    K G E 
Sbjct: 201 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFEL 257

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMP 757
           EV   + L+D   ++   + A  ++   P
Sbjct: 258 EVAVRNALIDMYAKSMDVESASRVLKIDP 286


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 249/852 (29%), Positives = 416/852 (48%), Gaps = 81/852 (9%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL---LGKSTHARILNSSQIPDRF 89
           S +LSL     K H +     +   +IL+   S S LL   LG++ H  ++         
Sbjct: 23  SEALSLFHHCLKGHEAFKPDHTVLAAILK---SCSALLAPNLGRTLHGYVVKQGHGSCHV 79

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
               L+ MY++CG LV   +LFD++   D + WN +L+ ++ S + +A+ V   FR+  S
Sbjct: 80  TNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNKCDAD-VMRVFRMMHS 138

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
            RE++   + +T+A +L +C   G + A + VHGY +K G   D     ALV++Y+K G 
Sbjct: 139 SREALP--NSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGL 196

Query: 210 I-REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           +  +A  +FD +  +DVV W  M+   AEN   E+ F LF  + +    P+  +V  +L 
Sbjct: 197 VSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILP 256

Query: 269 VISDLGKRHE----EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           V +   K        Q+ +Y ++      +++V + N  +S YL+VG    A   F  M 
Sbjct: 257 VCASFDKSVAYYCGRQIHSYVLQW--PELSADVSVCNALISLYLKVGQMREAEALFWTM- 313

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
                 D+   +   A +AG  +       +G  LK+            ++++  +  + 
Sbjct: 314 ------DARDLVTWNAFIAGYTS-------NGEWLKA------------LHLFGNLASLE 348

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
            L  D  T+ S+L A + L + L + KQIH +  ++  +  D+ V  AL+  Y + G   
Sbjct: 349 TLLPDSVTMVSILPACAQL-KNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTE 407

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           EA + F      DL +WN++   +    +  + L L   M     R D +TI   ++ C 
Sbjct: 408 EAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCA 467

Query: 504 CLLMLKQGKQMHAYAMKSGFELD---LCVSSGILDMYVKCGAMV---------------- 544
            LL +++ K++H+Y++++G  L      V + ILD Y KCG M                 
Sbjct: 468 SLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLV 527

Query: 545 ----------------DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                           DA  IF+ +   D   W  M+    +N   + AL + H+++  G
Sbjct: 528 TCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARG 587

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + PD  T   L+   + + ++    Q    +I+  C  D  +  +L+D YAKCG I  AY
Sbjct: 588 MKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIR-SCFKDLHLEAALLDAYAKCGIIGRAY 646

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F+    ++ V++ AM+ G A HG  EE L +F  M   G++PD + F  +LSACS+ G
Sbjct: 647 KIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAG 706

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
            V E  + F+ + + +G++P VE Y+ +VD L R GR  EA  L+ S+P EA+A++   L
Sbjct: 707 RVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLWGTL 766

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGAC+   + E G+ VA +L  +E  D   Y++LSN++AA  +WD V   R  M+ K++K
Sbjct: 767 LGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADARWDGVMEVRRMMRNKDLK 826

Query: 829 KDPADLIFAKVE 840
           K PA   + +VE
Sbjct: 827 K-PAGCSWIEVE 837



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 5/257 (1%)

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE--RLDEITIATAVKACGCLLMLKQG 511
           G D  TW ++I+   L     +AL LF H     E  + D   +A  +K+C  LL    G
Sbjct: 3   GRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLG 62

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           + +H Y +K G       + G+L+MY KCG +V+   +F+ +   D V W  ++SG   +
Sbjct: 63  RTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGS 122

Query: 572 GEEDL-ALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            + D   + ++  M  S   +P+  T A ++   + L  L+ G+ +H  +IK     D  
Sbjct: 123 NKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTL 182

Query: 630 VGISLVDMYAKCGNI-EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            G +LV MYAKCG +  DAY +F  +  ++ V WNAM+ GLA++   E+   LF  M   
Sbjct: 183 GGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKG 242

Query: 689 GVEPDSVTFIGVLSACS 705
              P+  T   +L  C+
Sbjct: 243 PTRPNYATVANILPVCA 259


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 234/723 (32%), Positives = 357/723 (49%), Gaps = 57/723 (7%)

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIY-SKFGKIREAKF-LFDGMQE--RDVVLWKVML 232
           A + +HG+ALK G      VS +L+  Y S    +  A F +F  +    RDV  W  +L
Sbjct: 32  AGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLL 91

Query: 233 RAYAENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLGKRHEEQV-QAYAIKLLL 290
              + +     + H    +  +  + P   S   V    + +       V  A+A KL  
Sbjct: 92  NPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPS 151

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            + ++NV +    L+ Y ++G    A   F  M   N         V+ AA+        
Sbjct: 152 SSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNA--------VSWAAMV------- 196

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
                     SG Y+          ++  M   C L  ++F   +VL A S +P GL + 
Sbjct: 197 ----------SG-YATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVS-VPLGLLIG 244

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            Q+H   +K+  V    V  +L+ +Y +   M  A  +F +    +  TW+AMI GY  +
Sbjct: 245 VQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQN 304

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             +  A  +F  MH++G    E T    + A   +  L  GKQ H   +K GFE  + V 
Sbjct: 305 GEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVK 364

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           S ++DMY KCG   DA+  F+ +   DDV  WT MI+G V NGE + AL +Y +M   GV
Sbjct: 365 SALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGV 424

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
           +P   T   +++A +CL ALE G+Q+HA ++K        VG +L  MY+KCGN+ED+ +
Sbjct: 425 MPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMV 484

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F++M  R+ + WN+++ G +QHG G + L LFE+MK  G+ PD +TFI VL ACS+ GL
Sbjct: 485 VFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGL 544

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V   +  F  M + YG+ P+++HY+ +VD L RAG+ KEA + I S+  +    + R +L
Sbjct: 545 VDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVL 604

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR   D + G +  E+LM L   DSSAY+LLSNI+AA  +W+DV   R  M+ + V K
Sbjct: 605 GACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSK 664

Query: 830 DP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           DP                       A+ I  ++  L K +K+ GY     F+  D  +  
Sbjct: 665 DPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHMKDEGYRQTYKFLFDDELDAL 724

Query: 867 KER 869
           +ER
Sbjct: 725 RER 727



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 149/617 (24%), Positives = 236/617 (38%), Gaps = 104/617 (16%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFLTNNLMTMY 98
           P L+ SH       +Q+   LR A S+      G + H   L S       ++N+L+T Y
Sbjct: 7   PALRMSH-------AQFIEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFY 59

Query: 99  SRCGS----LVYARRLFDKMPD--RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
             C      L  A  +F  +P   RD+ SWNS+L   +                FRS+  
Sbjct: 60  --CSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLSR------HQPLAALSHFRSMMS 111

Query: 153 SI--TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW---DEFVSGALVNIYSKF 207
           S      +  + A +           A    H +A K+       + FVS AL+N+Y K 
Sbjct: 112 STDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKL 171

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF-VDLHRSGLCPDDESVQCV 266
           G I +A+ +FD M  R+ V W  M+  YA     EE F LF + L    L  ++     V
Sbjct: 172 GAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAV 231

Query: 267 LGVIS-DLGKRHEEQVQAYAIK-------------LLLY---------------NNNSNV 297
           L  +S  LG     Q+    +K             + +Y               +   N 
Sbjct: 232 LSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNS 291

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           + W+  ++GY Q G+   A   F+ M  +       TF+  L A +    L +G+Q HG 
Sbjct: 292 ITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGL 351

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVC--------------------------------- 384
            +K GF   V V ++L++MY+K GC                                   
Sbjct: 352 MVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEE 411

Query: 385 -----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      G+     T+ SVLRA + L   L   KQ+H   +K        V TAL 
Sbjct: 412 ALMLYSRMDKEGVMPSYLTVTSVLRACACL-AALEPGKQLHAQILKCGFGLGGSVGTALS 470

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y + G++ ++  +F      D+ +WN++I G+        AL+LF  M   G   D I
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHI 530

Query: 494 TIATAVKACGCLLMLKQGK-QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           T    + AC  + ++ +G     A +   G    L   + I+D+  + G + +A+     
Sbjct: 531 TFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIES 590

Query: 553 IPAPDDVA-WTTMISGC 568
           I        W  ++  C
Sbjct: 591 ITIDHGTCLWRIVLGAC 607



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 28/383 (7%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS--M 442
            LR         LR ++S          +H  A+K+   + + VS +LI  YC      +
Sbjct: 8   ALRMSHAQFIEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLL 67

Query: 443 AEAEYLFENKDG--FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI-----TI 495
             A  +F +      D+A+WN+++       + H+ L   SH  +     D +     + 
Sbjct: 68  GAAFAVFADIPAGLRDVASWNSLLNPL----SRHQPLAALSHFRSMMSSTDAVLPTPHSF 123

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMK---SGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           A    A   +     G   HA+A K   S    ++ VS+ +L+MY K GA+ DA+ +F+ 
Sbjct: 124 AAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQ 183

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQ 611
           +P  + V+W  M+SG       + A  ++  M +   +  +EF    ++ A S    L  
Sbjct: 184 MPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLI 243

Query: 612 GRQIHANLIKLDCSSDPFVGI-----SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           G Q+H  ++K     D  VG      SLV MYAK   ++ A  +F     RN++ W+AM+
Sbjct: 244 GVQLHGLVLK-----DGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMI 298

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
            G AQ+G  +    +F  M + G  P   TF+G+L+A S  G +    +   LM  K G 
Sbjct: 299 TGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLM-VKLGF 357

Query: 727 EPEVEHYSFLVDALGRAGRTKEA 749
           E +V   S LVD   + G T +A
Sbjct: 358 ERQVYVKSALVDMYAKCGCTGDA 380


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 244/790 (30%), Positives = 369/790 (46%), Gaps = 129/790 (16%)

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENG--FGEEVFHLFVDLHRSGLCPDDESVQC 265
           G +  A  LFD +   DV  +  ++RAY+ +      +  HL+  + R  + P++ +   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 266 VLGVISDLGKRH-EEQVQAYAIKLLLYNN----------------------------NSN 296
            L   S L   H    +  +AI   L  +                              +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRS--NVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +V WN  L+GY   G  H A+   ++M      ++ ++ T +  L  +A    L  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
           H   +++  +S         N  SK                     S L +G+       
Sbjct: 251 HAYRIRACLHS---------NRNSK---------------------SKLTDGV------- 273

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
                        + TAL+D+Y + GS+  A  +F+     +  TW+A+I G++L +   
Sbjct: 274 ------------LLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321

Query: 475 KALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           +A  LF  M   G   L   +IA+A++AC  L  L+ G+Q+HA   KSG   DL   + +
Sbjct: 322 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 381

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           L MY K G +  A ++F+++   D V+++ ++SG V NG  + A  ++ +M+   V PD 
Sbjct: 382 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            T   L+ A S L AL+ GR  H ++I    +S+  +  +L+DMYAKCG I+ +  +F  
Sbjct: 442 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 501

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  R+ V WN M+ G   HG G+E   LF +M   G  PD VTFI +LSACS++GLV E 
Sbjct: 502 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 561

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
              FH+MR  YG+ P +EHY  +VD L R G   EA E I SMP  A   +  ALLGACR
Sbjct: 562 KHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
           V  + + GK V+  +  L P  +  +VLLSNI++AA ++D+    R   K +  KK P  
Sbjct: 622 VYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGC 681

Query: 832 ---------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                +  I+ +++ ++  IK+ GY PDT FVL D+EEEEKE+A
Sbjct: 682 SWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKA 741

Query: 871 LYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHH 907
           L  HSEKLA AYG++S      I   K                           ANRFHH
Sbjct: 742 LICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHH 801

Query: 908 LRDGMCPCAD 917
            ++G C C D
Sbjct: 802 FKNGQCSCGD 811



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 228/560 (40%), Gaps = 103/560 (18%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G L  A  LFD++P  D+ ++N ++ AY+ S    A    +G  L+R +       +  T
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAA---ADGLHLYRRMLRHRVAPNNYT 127

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
               LK C +         +H +A+  GL  D FVS AL+++Y K   + +A  +F  M 
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 222 ERDVVLWKVMLRAYAENG-FGEEVFHLF---VDLHRSGLCPDDESVQCVLGVISDLGKRH 277
            RD+V W  ML  YA +G +   V HL    + +HR  L P+  ++  +L +++  G   
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALA 245

Query: 278 E-EQVQAYAIKLLLYNNNS--------------------------------------NVV 298
           +   V AY I+  L++N +                                      N V
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV-ALAAVAGTDNLNLGQQIHGT 357
            W+  + G++       A   F  M+   + + S T +  AL A A  D+L +G+Q+H  
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
             KSG ++ +  GNSL++MY+K G +                                  
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                    C +  D  T+ S++ A S L   L   +  H   I     +++ +  ALID
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHL-AALQHGRCSHGSVIIRGLASETSICNALID 484

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G +  +  +F      D+ +WN MI GY +     +A  LF  M+  G   D +T
Sbjct: 485 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 544

Query: 495 IATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
               + AC    ++ +GK       H Y +    E  +C    ++D+  + G + +A   
Sbjct: 545 FICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEF 600

Query: 550 FNDIPAPDDV-AWTTMISGC 568
              +P   DV  W  ++  C
Sbjct: 601 IQSMPLRADVRVWVALLGAC 620



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 183/383 (47%), Gaps = 24/383 (6%)

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA--LELFSHMHTSGERLDEITIA 496
           +G ++ A +LF+     D+ T+N +I  Y  S+ +  A  L L+  M       +  T  
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
            A+KAC  L     G+ +H +A+ +G + DL VS+ +LDMYVKC  + DA  IF  +PA 
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 557 DDVAWTTMISGCVDNGEEDLALS--IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           D VAW  M++G   +G    A++  +  QM++  + P+  T   L+   +   AL QG  
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 615 IHANLIKLDCSSDP----------FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
           +HA  I+    S+            +G +L+DMYAKCG++  A  +F  M  RN V W+A
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHG---VEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           ++ G        +   LF+ M A G   + P S+     L AC+    +    E  H + 
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMG-EQLHALL 366

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
            K G+  ++   + L+    +AG   +A  L   M  + + S + AL+      G  E  
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-YSALVSGYVQNGRAEEA 425

Query: 782 KWVAEKLMA--LEPFDSSAYVLL 802
             V +K+ A  +EP D++  V L
Sbjct: 426 FLVFKKMQACNVEP-DAATMVSL 447



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 35/285 (12%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            L   L+ MY++CGSL+YARR+FD MP R+ ++W++++  +          +T+ F LF+
Sbjct: 274 LLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFV-----LCSRMTQAFLLFK 328

Query: 149 S-LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           + L + + F S  ++A  L+ C S  ++   E +H    K G+  D     +L+++Y+K 
Sbjct: 329 AMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 388

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G I +A  LFD M  +D V +  ++  Y +NG  EE F +F  +    + PD  ++  ++
Sbjct: 389 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448

Query: 268 GVISDLGKRHEEQ---------------------VQAYA------IKLLLYN--NNSNVV 298
              S L      +                     +  YA      +   ++N   + ++V
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 508

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            WN  ++GY   G    A   F+ M       D VTF+  L+A +
Sbjct: 509 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S +   S LR   S   L +G+  HA +  S    D    N+L++MY++ G +  A  LF
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D+M  +D +S++++++ Y  +G        E F +F+ ++         T+  L+  C  
Sbjct: 399 DEMAVKDTVSYSALVSGYVQNGRAE-----EAFLVFKKMQACNVEPDAATMVSLIPACSH 453

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +      HG  +  GL  +  +  AL+++Y+K G+I  ++ +F+ M  RD+V W  M
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 513

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF++++  G  PD  +  C+L   S  G
Sbjct: 514 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA--LSIYHQMRLSGVVPDEF 594
           ++  G +  A  +F+ IP+PD   +  +I     +     A  L +Y +M    V P+ +
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF   +KA S L     GR IH + I     +D FV  +L+DMY KC  + DA  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLK--LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
             R+ V WNAML G A HG     +   L   M+ H + P++ T + +L   +  G +++
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 221/683 (32%), Positives = 333/683 (48%), Gaps = 132/683 (19%)

Query: 331 DSVTFLVALAAVAGTDNLNLGQQI-HGTTLKSGFYSAVIVGNSLINMYSKMGCVC----- 384
           D  ++   + A A +  LN  +++ + T ++S      I  +SLI+ Y + GC       
Sbjct: 71  DECSWNTMIGAYANSGRLNEARKLFYETPIRS-----CITWSSLISGYCRYGCDVEALEL 125

Query: 385 -------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                  G R +QFT  SVLR  S +   L   KQIH HAIK    +++FV T L+D+Y 
Sbjct: 126 FWEMQYEGERPNQFTWGSVLRVCS-MYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYA 184

Query: 438 RNGSMAEAEYLFE-NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
           +   + EAEYLFE   D  +   W AM+ GY  + + HKA+E F  M   G   ++ T  
Sbjct: 185 KCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFP 244

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + + ACG +     G Q+H   ++SGF  ++ V S ++DMY KCG + +A+ +   +   
Sbjct: 245 SILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD 304

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W +MI GCV  G  + ALS++  M L  +  DEFT+  LV  +             
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNA------------- 351

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
                            LVDMYAK G  + A+ +F++M  ++ + W +++ G   +G+ E
Sbjct: 352 -----------------LVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE 394

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSA------------------------------CSY 706
           E L+LF +M+  G+ PD +    VLSA                               ++
Sbjct: 395 EALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITW 454

Query: 707 TGLVSEAYEN------FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           T L+    +N      F  M E YGI+P  EHY+ ++D LGR+G+  EA EL+  M  + 
Sbjct: 455 TALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 514

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
            A++ +ALL ACRV G+ E G+  A  L  LEP ++  YVLLSN+++AA +W++    R 
Sbjct: 515 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 574

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
            MK + V K+P                          I++KV+ ++  IKE GYVPD +F
Sbjct: 575 LMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNF 634

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY---------------- 901
            L D++EE KE  L YHSEKLA A+GL++ PP + I   K                    
Sbjct: 635 ALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFH 694

Query: 902 -------ANRFHHLRDGMCPCAD 917
                  +N FHH R+G C C+D
Sbjct: 695 RHVILRDSNCFHHFREGACSCSD 717



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 236/590 (40%), Gaps = 129/590 (21%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           DE     ++  Y+  G++ EA+ LF     R  + W  ++  Y   G   E   LF ++ 
Sbjct: 71  DECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQ 130

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN-------------- 293
             G  P+  +   VL V S     + GK    Q+ A+AIK    +N              
Sbjct: 131 YEGERPNQFTWGSVLRVCSMYVLLEKGK----QIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            N VLW   ++GY Q GD H AIECF +M    ++ +  TF   
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--------DQ 390
           L A         G Q+HG  ++SGF + V VG++L++MYSK G +   R         D 
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306

Query: 391 FTLASVLRASSSL---PEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAE 446
            +  S++          E L L + +H+  +K D     S V+ AL+D+Y + G    A 
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAF 366

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +FE     D+ +W +++ G + + +  +AL LF  M   G   D+I IA  + A     
Sbjct: 367 DVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA----- 421

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
                                 + + ++ MY KCG + DA  +F+ +   D + WT +I 
Sbjct: 422 ----------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIV 459

Query: 567 GCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           G   NG        +  M  + G+ P    +A                            
Sbjct: 460 GYAQNGR---GRDYFQSMEEVYGIKPGPEHYA---------------------------- 488

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETL-K 680
                   ++D+  + G + +A  L  QM ++ +  +W A+L     HGN   GE     
Sbjct: 489 -------CMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANN 541

Query: 681 LFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           LFE      +EP ++V ++ + +  S  G   EA +   LM+ + G+  E
Sbjct: 542 LFE------LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLR-GVSKE 584



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 236/545 (43%), Gaps = 77/545 (14%)

Query: 62  HAISTSDLLLGK-STHARILNSSQI----PDR--FLTNNLMTMYSRCGSLVYARRLFDKM 114
           H+ S S+ +L   S   R+ ++ ++    PDR     N ++  Y+  G L  AR+LF + 
Sbjct: 39  HSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYET 98

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P R  I+W+S+++ Y   G        E   LF  ++      ++ T   +L++C     
Sbjct: 99  PIRSCITWSSLISGYCRYGCD-----VEALELFWEMQYEGERPNQFTWGSVLRVCSMYVL 153

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERDVVLWKVMLR 233
           +   + +H +A+K     + FV   LV++Y+K   I EA++LF+    +R+ VLW  M+ 
Sbjct: 154 LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVT 213

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLL 290
            Y++NG G +    F D+   G+  +  +   +L   G IS  G     QV    ++   
Sbjct: 214 GYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG--FGAQVHGCIVRSGF 271

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLN 349
               +NV + +  +  Y + GD   A      M +   V ++S+        + G + L+
Sbjct: 272 ---GANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGL-GEEALS 327

Query: 350 LGQQIHGTTLK-SGFYSAVIVGNSLINMYSKMGC------VCGLRTDQ-----FTLASVL 397
           L + +H   +K   F    +V N+L++MY+K G       V    TD+      +L +  
Sbjct: 328 LFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGC 387

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA----LIDVYCRNGSMAEAEYLFENKD 453
             + S  E L L  ++ +  I  D +  + V +A    L+ +Y + G + +A  +F++ +
Sbjct: 388 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSME 447

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D+ TW A+I GY     + +  + F  M                              
Sbjct: 448 IQDVITWTALIVGYA---QNGRGRDYFQSME----------------------------- 475

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNG 572
              Y +K G E   C    ++D+  + G +++A+ + N +   PD   W  +++ C  +G
Sbjct: 476 -EVYGIKPGPEHYAC----MIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHG 530

Query: 573 EEDLA 577
             +L 
Sbjct: 531 NVELG 535



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 38/331 (11%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W S+LR       L  GK  HA  + +    + F+   L+ MY++C  ++ A  LF+  P
Sbjct: 141 WGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP 200

Query: 116 D-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           D R+ + W +++  Y+ +G+G+     +    FR +R      ++ T   +L  C S   
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGH-----KAIECFRDMRGEGIECNQFTFPSILTACGSISA 255

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
                 VHG  ++ G   + FV  ALV++YSK G +  A+ + + M+  D V W  M+  
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVG 315

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL--GVISDLGKRHEEQVQAYAIKLLLYN 292
               G GEE   LF  +H   +  D+ +   ++   ++    KR       YA  +    
Sbjct: 316 CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKR---GYFDYAFDVFEKM 372

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
            + +V+ W   ++G +  G    A+  F  M    +  D +     L+A           
Sbjct: 373 TDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA----------- 421

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
                           + NSL++MY+K GC+
Sbjct: 422 ----------------LDNSLVSMYAKCGCI 436


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 216/719 (30%), Positives = 352/719 (48%), Gaps = 96/719 (13%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD-NLNLG 351
            + NVV W   +S +   G    A+  F  M+ S V  D +TF   L   +G + NL+ G
Sbjct: 77  KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEG 136

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
           +++H   +++G+    +V N ++ MY K G V                            
Sbjct: 137 KRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQN 196

Query: 384 ---------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSF 427
                           G++ D +T  +VL A +++   L  +K +H   I +  +  D+ 
Sbjct: 197 GHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG-ALEEAKILHAATISSTGLDRDAA 255

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V TALI++Y + G++ EA  +F   D  D+ +W++MI  +  S  +  A++L   M   G
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R + +T    ++A   L   + GK++HA  +++G+  D+C++S ++ MY   G +  A+
Sbjct: 316 VRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETAR 375

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           SIF      D V+W++MI+G   N     ALS++ +M + GV P+  TF   + A + + 
Sbjct: 376 SIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVG 435

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           AL +G Q+H  +  L    D  V  +LV++Y KCG +E+A  +F  M  +N + W ++ +
Sbjct: 436 ALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAM 495

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
              Q+G+G  +LKL   M+  G++PD + F+ +L +C+Y G +S+    ++LM + +GI 
Sbjct: 496 AYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIA 555

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P VEH   +VD LGRAG+ + A +LI +M FE+S +    LL AC+   DT      AEK
Sbjct: 556 PAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWM-MLLTACKAHNDTARAARAAEK 614

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK-----------------D 830
           +  LEP +++ YVLLS++F AA  W+     R  M  + V++                  
Sbjct: 615 IFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVA 674

Query: 831 PADL--------IFAKVEGLIKRIKEGGYVPDTDFV-LLDVEEEEKERALYYHSEKLARA 881
            +D+        IFA +E L + ++  GYVPD   V L DVEE  KE A+ YHSE LA  
Sbjct: 675 ASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALG 734

Query: 882 YGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            G+ISTP  + +   K                             R HH  +G+C C D
Sbjct: 735 LGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGD 793



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/622 (22%), Positives = 263/622 (42%), Gaps = 104/622 (16%)

Query: 72  GKSTHARILNSSQIPDR-----FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           GK  H  ++  S + D       L N ++ MY RCG    A  +FD+M D+++++W S++
Sbjct: 29  GKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLI 88

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGYVWASETVHGYA 185
           +A+  +G     +  +   LFR +  S     R+T    LLK       +   + VH + 
Sbjct: 89  SAFTFAG-----HFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHI 143

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           ++ G   D  V   +V +Y K G + +A  +FD +Q+ +V  W +++ AYA+NG   EV 
Sbjct: 144 MQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVL 203

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV------------QAYAIKLLLYN- 292
            L   ++++G+ PD  +   VLG  + +G   E ++            +  A+   L N 
Sbjct: 204 RLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINL 263

Query: 293 -----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                            +N ++V W+  ++ + Q G    AI+  + M    V+ ++VTF
Sbjct: 264 YGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTF 323

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT------- 388
           +  L AV        G++IH   +++G+   V + ++L+ MY   G V   R+       
Sbjct: 324 VNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRE 383

Query: 389 -DQFTLASVLRASS---SLPEGLHLSKQIHVHAIKNDTVA-------------------- 424
            D  + +S++   S   S    L L +++ V  ++ ++V                     
Sbjct: 384 RDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQL 443

Query: 425 -----------DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                      D  V+TAL+++Y + G + EAE +F      +L TW ++   Y  + + 
Sbjct: 444 HERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHG 503

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            ++L+L   M   G + D I     + +C     + +G  +H Y +       +    GI
Sbjct: 504 SRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKG--LHYYNL-------MTQDFGI 554

Query: 534 LDMYVKCGAMVD----------AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
                 CG MVD          A+ + N +     +AW  +++ C      D A +    
Sbjct: 555 APAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTAC--KAHNDTARAARAA 612

Query: 584 MRLSGVVPDEFTFAILVKASSC 605
            ++  + P   T  +L+ +  C
Sbjct: 613 EKIFQLEPKNATPYVLLSSVFC 634



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 172/318 (54%), Gaps = 6/318 (1%)

Query: 394 ASVLRASS---SLPEGLHLSKQIHVHAIKNDTVAD-SFVSTALIDVYCRNGSMAEAEYLF 449
           A++L A S   +LPEG  +   +   ++  D   D S +   +I +Y R G    A  +F
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA-VKACGCLLML 508
           +     ++  W ++I  +  + +   A+ LF  M  SG   D IT  +  +K  G    L
Sbjct: 74  DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            +GK++H++ M++G+E D  V + +++MY KCG +  A ++F+ I  P+  +WT +I+  
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI-KLDCSSD 627
             NG     L +  +M  +GV PD +TF  ++ A + + ALE+ + +HA  I       D
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             VG +L+++Y KCG +E+A+ +F Q+D ++ V W++M+   AQ G  +  ++L   M  
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313

Query: 688 HGVEPDSVTFIGVLSACS 705
            GV P++VTF+ VL A +
Sbjct: 314 EGVRPNNVTFVNVLEAVT 331



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 149/307 (48%), Gaps = 38/307 (12%)

Query: 492 EITIATAV-KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD-----MYVKCGAMVD 545
           EI+   A+  AC  L  L +GK++H   M+     D      +L+     MY++CG    
Sbjct: 9   EISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDL 68

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF-AILVKASS 604
           A  +F+ +   + VAWT++IS     G    A+ ++ +M LSGV PD  TF +IL+K S 
Sbjct: 69  ALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSG 128

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
               L++G+++H+++++     D  V   +V+MY KCG++E A  +F  +   N   W  
Sbjct: 129 RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTI 188

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA----------- 713
           ++   AQ+G+  E L+L   M   GV+PD  TF  VL AC+  G + EA           
Sbjct: 189 IIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISST 248

Query: 714 ---------------YENFHLMREKYGIEPEVEH-----YSFLVDALGRAGRTKEAGELI 753
                          Y     + E +G+  ++++     +S ++ A  ++G+ K A +L+
Sbjct: 249 GLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLL 308

Query: 754 LSMPFEA 760
           + M  E 
Sbjct: 309 MLMDLEG 315



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILRHAIST 66
           F  F +   +++ S+S  +  F Q     S+              ++  + ++L    S 
Sbjct: 274 FGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSL 333

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
                GK  HARI+ +    D  LT+ L+ MY   G +  AR +F+   +RD++SW+S++
Sbjct: 334 KAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMI 393

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A Y+ +     E+      LFR +       + +T    +  C   G +     +H    
Sbjct: 394 AGYSQN-----ESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVR 448

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            +GL  D  V+ ALVN+Y K G++ EA+ +F GM++++++ W  +  AY +NG G     
Sbjct: 449 CLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLK 508

Query: 247 LFVDLHRSGLCPD 259
           L   +   G+ PD
Sbjct: 509 LLHGMELQGMKPD 521



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 14/207 (6%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P+ +LSL   ++      +S +  + S +        L  G   H R+       D  + 
Sbjct: 402 PARALSLFREMEVDGVQPNSVT--FVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVA 459

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE-NVTEGFRLFRSL 150
             L+ +Y +CG L  A  +F  M  ++L++W SI  AY  +G G+    +  G  L    
Sbjct: 460 TALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMK 519

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL---KIGLVWDEFVSGALVNIYSKF 207
            + I F +      +L  C  +G +  S+ +H Y L     G+       G +V+I  + 
Sbjct: 520 PDGIVFVA------ILVSCNYAGQM--SKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRA 571

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRA 234
           GK+  A+ L + M+    + W ++L A
Sbjct: 572 GKLEAAEQLINTMKFESSLAWMMLLTA 598


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 264/915 (28%), Positives = 417/915 (45%), Gaps = 158/915 (17%)

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           RS ++   +    TLA LL+ C+    +     +H   +K GL  ++ +   LV +YSK 
Sbjct: 13  RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL---HRSGLCPDDESVQ 264
             + +A   F  ++ R +  W  ++ A +       VF L+  +    R+   P+  ++ 
Sbjct: 73  RSLDDANAAFSALRSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNRLTII 129

Query: 265 CVLGVIS--DLGKRHEEQVQAYAIKLLLYNNN--SNVVLWNKKLSGYLQVGDNHGAIECF 320
            VLG I+  D       + QA  +   +  ++   ++ +    L  Y + G    A+E F
Sbjct: 130 AVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVF 189

Query: 321 VNMIRSNVQY-DSVTFLVALAAVAGTD--------------------------------- 346
                S +Q  D + +  A+ A AG D                                 
Sbjct: 190 -----SRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCG 244

Query: 347 ---NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------- 383
              +L L + IH    + GF   V+V  +L+ MY + G V                    
Sbjct: 245 DHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNA 304

Query: 384 -------C----------------GLRTDQFTLASVLRAS-SSLPEGLHLSKQIHVHAIK 419
                  C                G R ++ T  + L+A+ SS  + L  S  +H     
Sbjct: 305 MIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIAC 364

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                D  V TAL+ +Y   G++  A   F+     ++ +WNAM+  Y  +  + +A+EL
Sbjct: 365 AGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMEL 424

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYV 538
           F+ M       ++++    +   GC   + + + +HA  + +G F  +  +++G++ M+ 
Sbjct: 425 FAAMKRQSLAPNKVSYLAVL---GCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFA 481

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL--ALSIYHQMRLSGVVPDEFTF 596
           + G++ +A + F+     D V+W T ++    +  EDL  A++ ++ M+  G  PD+FT 
Sbjct: 482 RSGSLEEAMAAFDATVVKDSVSWNTKVAAL--SAREDLHGAITAFYTMQHEGFRPDKFTL 539

Query: 597 AILVKASSCLTALEQGRQIHANL-IKLDCSSDPFVGISLVDMYAKCG-NIEDAYILFKQM 654
             +V   + L  LE GR I   L   ++   D  V  ++++M AKCG ++++   LF +M
Sbjct: 540 VSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARM 599

Query: 655 --DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVS 711
             D ++ V WN M+   AQHG+G + LKLF  M+    V PDS TF+ VLS CS+ GLV 
Sbjct: 600 PDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE 659

Query: 712 EAYENFHLMREKYGIEPE-VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           +    F L RE  GIE + VEHY+ LVD LGR G  +EA + I  MP  A + +  +LLG
Sbjct: 660 DGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLG 719

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           AC   GD E G+  A   + L   DS  YV+LSNI+AAA +W+D    R +M  + VKK 
Sbjct: 720 ACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKR 779

Query: 831 P------------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
                                    +D I+A++E L   I+E GYVPDT  VL DVEEE+
Sbjct: 780 APGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQ 839

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--AN 903
           KE+ L+YHSEKLA A+GLIS P    I                     ++ +E      N
Sbjct: 840 KEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCN 899

Query: 904 RFHHL-RDGMCPCAD 917
           RFHH  +DG C C D
Sbjct: 900 RFHHFGKDGECSCGD 914



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 243/532 (45%), Gaps = 51/532 (9%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + + +IL      S L L +S HAR+     + D  +   L+TMY RCGS+  +  +F+ 
Sbjct: 234 ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEA 293

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           M  R+ +SWN+++AA+A  G  +A      F ++  +++     +++T    LK   SS 
Sbjct: 294 MAVRNHVSWNAMIAAFAQCGHRSA-----AFAIYWRMQQEGFRPNKITFVTALKAACSSS 348

Query: 174 Y--VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +  S  +HG+    GL  D  V  ALV +Y   G I  A+  FD +  +++V W  M
Sbjct: 349 SQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 408

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLY 291
           L AY +NG   E   LF  + R  L P+  S   VLG   D+ +     + A  +   L+
Sbjct: 409 LTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE--ARSIHAEVVGNGLF 466

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
              S++       +G +++    G++E  +    + V  DSV++   +AA++  ++L   
Sbjct: 467 AQESSIA------NGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDL--- 517

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
              HG    + FY+          M  +     G R D+FTL SV+   + L   L L +
Sbjct: 518 ---HGAI--TAFYT----------MQHE-----GFRPDKFTLVSVVDVCADLGT-LELGR 556

Query: 412 QIHVH-AIKNDTVADSFVSTALIDVYCRNG-SMAEAEYLFEN--KDGFDLATWNAMIFGY 467
            I    +   +   D  V +A++++  + G S+ E E LF     D  DL  WN MI  Y
Sbjct: 557 SIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAY 616

Query: 468 ILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS---GF 523
               +  KAL+LF  M   S  R D  T  + +  C    +++ G  +H + +     G 
Sbjct: 617 AQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGI 674

Query: 524 ELDLCVS-SGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGE 573
           E       + ++D+  + G + +A+     +P P D V WT+++  C   G+
Sbjct: 675 EQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGD 726



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 175/736 (23%), Positives = 304/736 (41%), Gaps = 105/736 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR  I  +DL  G+  H +I+      +  L N L+ MYS+C SL  A   F  +  R 
Sbjct: 30  LLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRG 89

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG----- 173
           + +WN+++AA     + +   V + +   +    +    +RLT+  +L   ++SG     
Sbjct: 90  IATWNTLIAA-----QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLG-AIASGDPSSS 143

Query: 174 --YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                 +  VH       L  D FV+ AL++ Y K G +  A  +F  +Q  D++ W   
Sbjct: 144 SSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAA 203

Query: 232 LRAYAENGFGEEVFHLFV-DLHRSGLCPDDESVQCVLGVISD---------LGKRHEE-- 279
           + A A N    +   L V  +   GL P+  S   +L    D         +  R EE  
Sbjct: 204 IMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELG 263

Query: 280 ---QVQAYAIKLLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFV 321
               V      + +Y    +V               V WN  ++ + Q G    A   + 
Sbjct: 264 FLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYW 323

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ--IHGTTLKSGFYSAVIVGNSLINMYSK 379
            M +   + + +TF+ AL A   + + +LG+   +HG    +G    V+VG +L+ MY  
Sbjct: 324 RMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS 383

Query: 380 MGCV---------------------------CGLRTDQFTLASVLRASSSLP-------- 404
            G +                            G   +   L + ++  S  P        
Sbjct: 384 TGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAV 443

Query: 405 ----EGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
               E +  ++ IH   + N   A +S ++  ++ ++ R+GS+ EA   F+     D  +
Sbjct: 444 LGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVS 503

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN  +       + H A+  F  M   G R D+ T+ + V  C  L  L+ G+ +     
Sbjct: 504 WNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLS 563

Query: 520 KS-GFELDLCVSSGILDMYVKCGAMVD-AQSIFNDIP--APDDVAWTTMISGCVDNGEED 575
            +   E D+ V S +++M  KCG+ VD  + +F  +P    D VAW TMI+    +G   
Sbjct: 564 AAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGR 623

Query: 576 LALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVG 631
            AL ++  M + S V PD  TF  ++   S    +E G  IH   +    L     P   
Sbjct: 624 KALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPVEH 681

Query: 632 IS-LVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN---GEETLKLFEDMK 686
            + LVD+  + G + +A    ++M +  ++V+W ++L   + +G+   GE   + F ++ 
Sbjct: 682 YACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL- 740

Query: 687 AHGVEPDSVTFIGVLS 702
                 DSV ++ VLS
Sbjct: 741 ---YRSDSVGYV-VLS 752


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/665 (30%), Positives = 333/665 (50%), Gaps = 82/665 (12%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W   +  Y   G  H ++  F+ M+ S +  D   F   L + A   +LNLG+ +HG  +
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH-VHAI 418
           + G    +  GN+L+NMYSK      LR  + +    L A     E    ++ +  V  +
Sbjct: 134 RVGLDFDLYTGNALMNMYSK------LRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVL 187

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
             D+V                        +FE     DL +WN +I G   +    + L 
Sbjct: 188 SEDSV----------------------RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           +   M  +  + D  T+++ +      + + +GK++H  +++ G + D+ V+S ++DMY 
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC  + D+  +F  +   D ++W ++I+GCV NG  D  L  + QM ++ + P  ++F+ 
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A + LT L  G+Q+H  + +     + F+  SLVDMYAKCGNI  A  +F +M +R+
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V W AM++G A HG   + ++LFE M+  G++        VL+ACS+ GLV EA++ F+
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFN 458

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M   +GI P VEHY+ + D LGRAGR +EA + I  M    + S+   LL ACRV  + 
Sbjct: 459 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI 518

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           +  + VA +++ ++P ++ AY+LL+NI++AA +W +    R  M+R  ++K PA      
Sbjct: 519 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 578

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                            + I   +E L++ +++ GYVPDT  V  DVEEE+K+  +  HS
Sbjct: 579 KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 638

Query: 876 EKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGM 912
           E+LA  +G+I+TP    I   K                            +RFHH ++G 
Sbjct: 639 ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 698

Query: 913 CPCAD 917
           C C D
Sbjct: 699 CSCGD 703



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 221/494 (44%), Gaps = 47/494 (9%)

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           IYS    + ++  LF+ +     + WK ++R Y  +G   +    F+ +  SGL PD   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 263 V-----QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH-GA 316
                  C L +  +LG+     +    +   LY  N+ + +++K L    + G    GA
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK-LRFLEESGRQRLGA 167

Query: 317 IECFVNMIRSNVQYDSVTFLVA------LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
            E F  M        +V+ L           +   D ++    I G   ++G Y   +  
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNA-RNGLYEETL-- 224

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS--KQIHVHAIKNDTVADSFV 428
                M  +MG    L+ D FTL+SVL     + E + +S  K+IH  +I+    AD +V
Sbjct: 225 ----RMIREMGGA-NLKPDSFTLSSVL---PLIAENVDISRGKEIHGCSIRQGLDADIYV 276

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +++LID+Y +   +A++  +F      D  +WN++I G + +    + L  F  M  +  
Sbjct: 277 ASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKI 336

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           +    + ++ + AC  L  L  GKQ+H Y  ++GF+ ++ ++S ++DMY KCG +  A+ 
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           IF+ +   D V+WT MI GC  +G+   A+ ++ QM   G+              + LTA
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI-------------KAVLTA 443

Query: 609 LEQGRQI-----HANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNT-V 660
              G  +     + N +  D    P V    ++ D+  + G +E+AY     M +  T  
Sbjct: 444 CSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGS 503

Query: 661 LWNAMLVGLAQHGN 674
           +W  +L     H N
Sbjct: 504 IWATLLSACRVHKN 517



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 5/199 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       D+  GK  H   +      D ++ ++L+ MY++C  +  + R+F  + +R
Sbjct: 244 SVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER 303

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ISWNSI+A    +G  +     EG R FR +  +       + + ++  C     +  
Sbjct: 304 DGISWNSIIAGCVQNGLFD-----EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHL 358

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HGY  + G   + F++ +LV++Y+K G IR AK +FD M+ RD+V W  M+   A 
Sbjct: 359 GKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCAL 418

Query: 238 NGFGEEVFHLFVDLHRSGL 256
           +G   +   LF  +   G+
Sbjct: 419 HGQAPDAIELFEQMETEGI 437



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/437 (21%), Positives = 181/437 (41%), Gaps = 84/437 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR+ +S       +  HA++L   Q       + L+++YS    L  + RLF+ +   
Sbjct: 11  ALLRNPLSIKSRSQAQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFP 69

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W S++  Y   G  +     +    F  +  S  +        +LK C     +  
Sbjct: 70  PALAWKSVIRCYTSHGLPH-----QSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNL 124

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA------------------------ 213
            E++HGY +++GL +D +   AL+N+YSK   + E+                        
Sbjct: 125 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTV 184

Query: 214 --------KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
                   + +F+ M E+D+V W  ++   A NG  EE   +  ++  + L PD  ++  
Sbjct: 185 SVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSS 244

Query: 266 VLGVIS---DLGKRHE------------------EQVQAYA--------IKLLLYNNNSN 296
           VL +I+   D+ +  E                    +  YA         ++       +
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERD 304

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            + WN  ++G +Q G     +  F  M+ + ++  S +F   + A A    L+LG+Q+HG
Sbjct: 305 GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 364

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-----DQFTLASVLRASSSL-------- 403
              ++GF   + + +SL++MY+K G    +RT     D+  L  ++  ++ +        
Sbjct: 365 YITRNGFDENIFIASSLVDMYAKCG---NIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421

Query: 404 -PEGLHLSKQIHVHAIK 419
            P+ + L +Q+    IK
Sbjct: 422 APDAIELFEQMETEGIK 438



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 149/340 (43%), Gaps = 47/340 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA---------- 107
           S+L+      DL LG+S H  I+      D +  N LM MYS+   L  +          
Sbjct: 111 SVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEV 170

Query: 108 ----------------------RRLFDKMPDRDLISWNSILAAYAHSGEGNAEN--VTEG 143
                                 R++F+ MP++DL+SWN+I+A       GNA N    E 
Sbjct: 171 FDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIA-------GNARNGLYEET 223

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
            R+ R +  +       TL+ +L L   +  +   + +HG +++ GL  D +V+ +L+++
Sbjct: 224 LRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDM 283

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y+K  ++ ++  +F  + ERD + W  ++    +NG  +E    F  +  + + P   S 
Sbjct: 284 YAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSF 343

Query: 264 QCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
             ++   + L   H  +Q+  Y  +      + N+ + +  +  Y + G+   A + F  
Sbjct: 344 SSIMPACAHLTTLHLGKQLHGYITR---NGFDENIFIASSLVDMYAKCGNIRTAKQIFDR 400

Query: 323 M-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
           M +R  V + ++    AL   A  D + L +Q+    +K+
Sbjct: 401 MRLRDMVSWTAMIMGCALHGQA-PDAIELFEQMETEGIKA 439



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 38/315 (12%)

Query: 510 QGKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           Q +Q+HA  +K  F+   LC  S +L +Y     + D+  +FN I  P  +AW ++I   
Sbjct: 24  QAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCY 81

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G    +L  +  M  SG+ PD   F  ++K+ + L  L  G  +H  +I++    D 
Sbjct: 82  TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141

Query: 629 FVGISLVDMYAKCGNIEDA--------------------------------YILFKQMDM 656
           + G +L++MY+K   +E++                                  +F+ M  
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           ++ V WN ++ G A++G  EETL++  +M    ++PDS T   VL   +    +S   E 
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE- 260

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            H    + G++ ++   S L+D   +  R  ++   + ++  E       +++  C   G
Sbjct: 261 IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR-VFTLLTERDGISWNSIIAGCVQNG 319

Query: 777 DTETG-KWVAEKLMA 790
             + G ++  + LMA
Sbjct: 320 LFDEGLRFFRQMLMA 334


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 193/578 (33%), Positives = 305/578 (52%), Gaps = 47/578 (8%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           ++ D+FT +SVL+A S + + L   +Q+H   +K+   ++ FV   LI +Y   G +  A
Sbjct: 117 VQHDKFTFSSVLKACSRM-KALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVA 175

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
            ++F+      +  WN+M+ GY  +    + ++LF  +       D++T+ + + ACG L
Sbjct: 176 RHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRL 235

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+ G+ +  Y +  G   +  +++ ++DMY KCG +  A+ +F+++   D VAW+ MI
Sbjct: 236 ANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           SG         AL+++H+M+   V P+E T   ++ + + L A E G+ +H  + K    
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
               +G  L+D YAKCG I+ +  +FK+M  +N   W A++ GLA +G G+  L+ F  M
Sbjct: 356 LTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSM 415

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
             + V+P+ VTFIGVLSACS+  LV +    F+ MR  + IEP +EHY  +VD LGRAG 
Sbjct: 416 LENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGF 475

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
            +EA + I +MPF  +A + R LL +CR   + E  +   E +  LEP  S  Y+LLSN 
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNT 535

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
           +A   + +D    R  +K K +KK P                       +  I   ++ +
Sbjct: 536 YALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKM 595

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA 902
           +K+IK  GYVP+TD   L+ EEE KE ++ +HSEKLA AYGLI T P + I  +K     
Sbjct: 596 MKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC 655

Query: 903 -----------------------NRFHHLRDGMCPCAD 917
                                  NRFHH +DG+C C D
Sbjct: 656 RDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCND 693



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 206/431 (47%), Gaps = 27/431 (6%)

Query: 376 MYSKMGCVCGLRTDQFTL-----ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           M S +GC+  +     T       S++      P+ L   +Q+H H +K   + D  ++ 
Sbjct: 1   MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDL---QQVHAHLLKTRRLLDPIITE 57

Query: 431 ALID--VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           A+++        ++  A  +F + D  + + +N MI G     +   AL LF  MH    
Sbjct: 58  AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 117

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           + D+ T ++ +KAC  +  L++G+Q+HA  +KSGF+ +  V + ++ MY  CG +  A+ 
Sbjct: 118 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 177

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+ +P    VAW +M+SG   NG  D  + ++ ++    +  D+ T   ++ A   L  
Sbjct: 178 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 237

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE G  I   ++      +  +  SL+DMYAKCG ++ A  LF +MD R+ V W+AM+ G
Sbjct: 238 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 297

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN---FHLMREKYG 725
            AQ    +E L LF +M+   V P+ VT + VL +C+  G    AYE     H   +K  
Sbjct: 298 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG----AYETGKWVHFYIKKKK 353

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           ++  V   + L+D   + G    + E+   M F+              +QG    G    
Sbjct: 354 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK------NVFTWTALIQGLANNG---- 403

Query: 786 EKLMALEPFDS 796
           E  MALE F S
Sbjct: 404 EGKMALEFFSS 414



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 34/347 (9%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +LL F +    S       + S+L+       L  G+  HA IL S    + F+ N L+ 
Sbjct: 105 ALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQ 164

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY+ CG +  AR +FD MP+R +++WNS+L+ Y  +G  +     E  +LFR + E    
Sbjct: 165 MYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWD-----EVVKLFRKILELRIE 219

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
              +T+  +L  C     +   E +  Y +  GL  +  ++ +L+++Y+K G++  A+ L
Sbjct: 220 FDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKL 279

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           FD M +RDVV W  M+  YA+    +E  +LF ++ +  + P++ ++  VL   + LG  
Sbjct: 280 FDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAY 339

Query: 277 HEEQ-----VQAYAIKLLL--------------YNNNS----------NVVLWNKKLSGY 307
              +     ++   +KL +              Y + S          NV  W   + G 
Sbjct: 340 ETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGL 399

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
              G+   A+E F +M+ ++V+ + VTF+  L+A +    ++ G+ +
Sbjct: 400 ANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 124/563 (22%), Positives = 221/563 (39%), Gaps = 103/563 (18%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC--GSLVYARRLFDKMPD 116
           IL+   +  DL   +  HA +L + ++ D  +T  ++   +     ++ YA  +F+ +  
Sbjct: 27  ILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK 83

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            +  ++N ++   A     +         LF+ + E      + T + +LK C     + 
Sbjct: 84  PESSAYNVMIRGLAFKRSPD-----NALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALR 138

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             E VH   LK G   +EFV   L+ +Y+  G+I  A+ +FDGM ER +V W  ML  Y 
Sbjct: 139 EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYT 198

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNS 295
           +NG  +EV  LF  +    +  DD ++  VL     L      E +  Y +   L  NN+
Sbjct: 199 KNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNT 258

Query: 296 ----------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       +VV W+  +SGY Q      A+  F  M + N
Sbjct: 259 LTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGN 318

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V  + VT +  L + A       G+ +H    K      V +G  LI+ Y+K G      
Sbjct: 319 VYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCG------ 372

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                               ++ + + V   K  +  + F  TALI     NG       
Sbjct: 373 --------------------YIDRSVEV--FKEMSFKNVFTWTALIQGLANNGE------ 404

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                                       ALE FS M  +  + +++T    + AC    +
Sbjct: 405 -------------------------GKMALEFFSSMLENDVKPNDVTFIGVLSACSHACL 439

Query: 508 LKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTM 564
           + QG+ +   +M+  F+++  +     ++D+  + G + +A    +++P  P+ V W T+
Sbjct: 440 VDQGRHLFN-SMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTL 498

Query: 565 ISGCVDNGEEDLA-LSIYHQMRL 586
           ++ C  +   ++A  S+ H  RL
Sbjct: 499 LASCRAHKNIEMAEKSLEHITRL 521


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 229/801 (28%), Positives = 377/801 (47%), Gaps = 108/801 (13%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDE---FVSGALVNIYSKFGKIREAKFLFD 218
           L  +L+ C+S+ ++     +H  A+  G + D     +   L+ +Y    + R+A  +F 
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 219 GMQERDV---VLWKVMLRAYAENGFGEEVFHLFVDL--HRSGLCPDDESVQCVLGVISDL 273
            +        + W  ++R +   G        +V +  H +   PD  ++  V+   + L
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 274 GKRH---------------------EEQVQAYAIKLLLYNNNS--------NVVLWNKKL 304
           G                           V+ YA   LL N           + VLWN  +
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
            G ++ GD  GA+  F NM  S  + +  T    L+  A   +L  G Q+H   +K G  
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274

Query: 365 SAVIVGNSLINMYSKM--------------------------GCV--------------- 383
             V V N+L+ MY+K                           GCV               
Sbjct: 275 PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM 334

Query: 384 --CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY--CRN 439
              G R D  TL S+L A + L  GL   K++H + ++N    D F+ +AL+D+Y  CR+
Sbjct: 335 QRSGARPDSITLVSLLPALTDL-NGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRD 393

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
             MA+   L++     D+   + MI GY+L+  S +AL++F ++     + + +TIA+ +
Sbjct: 394 VRMAQN--LYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVL 451

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
             C  +  L  G+Q+H Y +++ +E    V S ++DMY KCG +  +  IF  +   D+V
Sbjct: 452 PGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEV 511

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            W +MIS    NG+   AL ++ QM + G+  +  T +  + A + L A+  G++IH   
Sbjct: 512 TWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVT 571

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           IK    +D F   +L+DMYAKCGN+E A  +F+ M  +N V WN+++     HG  +E++
Sbjct: 572 IKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESV 631

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            L   M+  G +PD VTF+ ++SAC++ GLV E  + F  M +KY I P +EH++ +VD 
Sbjct: 632 SLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDL 691

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
             R+G+  +A + I  MPF+  A +  ALL ACRV  + E     +++L  L+P +S  Y
Sbjct: 692 YSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYY 751

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIF 836
           VL+SNI A A +WD V+  R  MK   + K P                       ++ I+
Sbjct: 752 VLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIY 811

Query: 837 AKVEGLIKRIKEGGYVPDTDF 857
             ++ L++ ++E GYVP  D 
Sbjct: 812 TSLKTLLQELREEGYVPRPDL 832



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 190/736 (25%), Positives = 326/736 (44%), Gaps = 102/736 (13%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
            LP        F   +  +  SS+ +  ++LR  +S   L LG   HAR + S  + D  
Sbjct: 9   KLPPRPFCSTTFSATAAVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSD-- 66

Query: 90  LTNNLMTMYSRC-GSLVYARR------LFDKMPDRDLIS---WNSILAAYAHSGEGNAEN 139
             +N + +++R  G  V ARR      +F  +P     S   WN ++  +  +G+    +
Sbjct: 67  --HNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQ---HH 121

Query: 140 VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
           +   F +      +       TL  ++K C + G +     VH  A  IGL  D +V  A
Sbjct: 122 LAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSA 181

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           LV +Y+  G +  A+  FDG+ ERD VLW VM+    + G  +    LF ++  SG  P+
Sbjct: 182 LVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPN 241

Query: 260 DESVQCVLGVI-SDLGKRHEEQVQAYAIK-------------LLLYNN------------ 293
             ++ C L V  +D       Q+ + A+K             L +Y              
Sbjct: 242 FATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFE 301

Query: 294 ---NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                ++V WN  +SG +Q G    A   F +M RS  + DS+T +  L A+   + L  
Sbjct: 302 LMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQ 361

Query: 351 GQQIHGTTLKS--------------------------GFYSA-----VIVGNSLINMYSK 379
           G+++HG  +++                            Y A     V++G+++I+ Y  
Sbjct: 362 GKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVL 421

Query: 380 MG---------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
            G               C+   + +  T+ASVL   +S+   L L +QIH + ++N    
Sbjct: 422 NGMSEEALQMFRYLLEQCI---KPNAVTIASVLPGCASM-AALPLGQQIHGYVLRNAYER 477

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
             +V +AL+D+Y + G +  + Y+F      D  TWN+MI  +  +    +AL+LF  M 
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMC 537

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G + + ITI+ A+ AC  L  +  GK++H   +K   + D+   S ++DMY KCG + 
Sbjct: 538 MEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLE 597

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A  +F  +P  ++V+W ++IS    +G    ++S+ H M+  G  PD  TF  L+ A +
Sbjct: 598 LALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACA 657

Query: 605 CLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTV 660
               +E+G Q+   + K   +    + F    +VD+Y++ G ++ A      M  + +  
Sbjct: 658 HAGLVEEGVQLFQCMTKKYLIAPRMEHFA--CMVDLYSRSGKLDKAIQFIADMPFKPDAG 715

Query: 661 LWNAMLVGLAQHGNGE 676
           +W A+L     H N E
Sbjct: 716 IWGALLHACRVHRNVE 731


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 226/745 (30%), Positives = 356/745 (47%), Gaps = 121/745 (16%)

Query: 271 SDLGKRHEEQVQAYAIKLLLYNNN--------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
           S L  +   Q+ A+ IK   +N +        +    +N  +S Y        +  C+++
Sbjct: 18  SHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLH 77

Query: 323 MIRSN--VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           M RSN     D+      L A A   + +LG+++HG   K+GF S V V N+L+NMY K 
Sbjct: 78  M-RSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKC 136

Query: 381 GCVCGLRT--DQF---------TLASVLRASSSLPEGLHLSKQ----------------- 412
           GC+   R   DQ          T+      S +  E L L ++                 
Sbjct: 137 GCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLI 196

Query: 413 --------------IHVHAIKN--DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                         +H + ++N  D   +  ++TALID+YC+ G +A A+ LF+      
Sbjct: 197 AVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRS 256

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           + +W  MI G I S    +  + F+ M       +EIT+ + +  CG +  L  GK  HA
Sbjct: 257 VVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHA 316

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           Y +++GF + L + + ++DMY KCG +  A+++FN +   D   W+ +IS        D 
Sbjct: 317 YLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQ 376

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
             +++ +M  + V P+  T   L+   +   AL+ G+  HA + +     D  +  +L++
Sbjct: 377 VFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALIN 436

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCG++  A  LF +   R+  +WN M+ G + HG G+E L+LF +M++HGVEP+ +T
Sbjct: 437 MYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDIT 496

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           F+ +  ACS++GL                    +EHY  LVD LGRAG   EA  +I +M
Sbjct: 497 FVSIFHACSHSGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIENM 536

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVT 816
           P   +  +  ALL AC++  +   G+  A K++ L+P +    VL SNI+A+A +W+DVT
Sbjct: 537 PMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVT 596

Query: 817 SARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVP 853
           S R  M    +KK+P                          ++  V  +  +++E GY P
Sbjct: 597 SVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTP 656

Query: 854 DTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE--------------- 898
           +T  VLL+++EEEKE AL YHSEKLA A+GLIST P + I   K                
Sbjct: 657 NTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLS 716

Query: 899 PLYA--------NRFHHLRDGMCPC 915
            +Y         NRFHH  +G C C
Sbjct: 717 KIYGRTIIVRDRNRFHHFSEGYCSC 741



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 215/448 (47%), Gaps = 40/448 (8%)

Query: 338 ALAAVAGTDNLNLGQ--QIHGTTLKSGF-----------YSAVIVGNSLINMYSK----- 379
           + +  +G  +LNL Q  Q+H   +K+ F           ++     N LI+ Y+      
Sbjct: 10  SFSGCSGHSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQ 69

Query: 380 --MGCVCGLRT------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
               C   +R+      D F L S+L+A +    G  L +++H  A KN   +D FV  A
Sbjct: 70  ASFNCYLHMRSNDAAALDNFILPSLLKACAQASSG-DLGRELHGFAQKNGFASDVFVCNA 128

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+++Y + G +  A  +F+     D+ +W  M+  Y+ S    +AL L   M   G +L 
Sbjct: 129 LMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLS 188

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKS-GFE-LDLCVSSGILDMYVKCGAMVDAQSI 549
            + + + +   G LL +K G+ +H Y +++ G E +++ +++ ++DMY K G +  AQ +
Sbjct: 189 GVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRL 248

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+ +     V+WT MI+GC+ +   D     +++M    + P+E T   L+     +  L
Sbjct: 249 FDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTL 308

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           + G+  HA L++        +  +L+DMY KCG +  A  LF  +  ++  +W+ ++   
Sbjct: 309 DLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAY 368

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV-----SEAYENFHLMREKY 724
           A     ++   LF +M  + V+P++VT + +LS C+  G +     + AY N H      
Sbjct: 369 AHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRH------ 422

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           G+E +V   + L++   + G    A  L
Sbjct: 423 GLEVDVILETALINMYAKCGDVTIARSL 450



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 231/533 (43%), Gaps = 77/533 (14%)

Query: 6   QANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIS 65
           Q++  P   +  +I SS+T +   +LP  S +    + +S+ +++  +    S+L+    
Sbjct: 46  QSHFTPEANYNLLI-SSYTNN---HLPQASFNCYLHM-RSNDAAALDNFILPSLLKACAQ 100

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
            S   LG+  H     +    D F+ N LM MY +CG LV AR +FD+MP+RD++SW ++
Sbjct: 101 ASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTM 160

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           L  Y  S     +   E  RL R ++      S + L  L+ +  +   + +   VHGY 
Sbjct: 161 LGCYVRS-----KAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYI 215

Query: 186 LKIGLVWDE----FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           ++   V DE     ++ AL+++Y K G +  A+ LFD + +R VV W VM+     +   
Sbjct: 216 VRN--VGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL 273

Query: 242 EEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKRHEEQV--------------- 281
           +E    F  +    L P++ ++     +C      DLGK     +               
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTAL 333

Query: 282 ---------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                      YA  L       +V +W+  +S Y  V         FV M+ ++V+ ++
Sbjct: 334 IDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNN 393

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---- 388
           VT +  L+  A    L+LG+  H    + G    VI+  +LINMY+K G V   R+    
Sbjct: 394 VTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE 453

Query: 389 ---DQFTLASVLRASSSL----PEGLHLSKQIHVHAIKNDTVADSFVST----------- 430
                  + + + A  S+     E L L  ++  H ++ + +  +FVS            
Sbjct: 454 AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDI--TFVSIFHACSHSGLME 511

Query: 431 ---ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS-HKALEL 479
               L+D+  R G + EA  + EN         N +I+G +L+    HK L L
Sbjct: 512 HYGCLVDLLGRAGHLDEAHNIIENMP----MRPNTIIWGALLAACKLHKNLAL 560


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 220/703 (31%), Positives = 346/703 (49%), Gaps = 90/703 (12%)

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + GY   G+   A+E F  + R   + +       L  +   D   L   IH    K G 
Sbjct: 120 MQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGH 179

Query: 364 YSAVIVGNSLINMYSKMGCVC--------------------------------------- 384
                VG +LI+ YS  G VC                                       
Sbjct: 180 DRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSK 239

Query: 385 ----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G + + F L S L+A+  L   L L K IH  ++K     +  V  AL+D+Y + G
Sbjct: 240 MRMTGFKPNPFVLTSALKAAVCLSSAL-LGKGIHGCSVKTLYDTEPHVGGALLDMYAKCG 298

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            + +A  +FE     D+  W+ +I  Y  S  + +A E+F  M  S    +E +++  ++
Sbjct: 299 DIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQ 358

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  +  L+ G+Q+H  A+K G+E +L V + ++DMY KC  M ++  IF+ +   ++V+
Sbjct: 359 ACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVS 418

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W T+I G   +G  + ALS++H+MR + ++  + TF+ +++A +  ++++   QIH+ + 
Sbjct: 419 WNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIE 478

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           K   ++D  V  SL+D YAKCG I DA  +F+ +   + V WN+++   A HG     L+
Sbjct: 479 KSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALE 538

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           LF+ M    ++ + VTF+ +LS C  TGLV++    F+ M   + I+P +EHY+ +V  L
Sbjct: 539 LFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLL 598

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
           GRAGR  +A + I  +P   S  + RALL +C V  +   G++ AEK++ +EP D + YV
Sbjct: 599 GRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYV 658

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------AD-----LIFA 837
           LLSN++AAA   D+V   R  M+   VKK+                   AD     +I A
Sbjct: 659 LLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINA 718

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
            +E L  +    GYVPD + VL DV+EEEK R L+ HSE+LA AYGL  TPP   I    
Sbjct: 719 MLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMK 778

Query: 894 -----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                            +  +E +    NRFHH  +G+C C D
Sbjct: 779 NLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGD 821



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 169/626 (26%), Positives = 281/626 (44%), Gaps = 103/626 (16%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           L+  I+  D   G++ HAR++    +   D F  N L+  Y++ G L  ARRLFD MP+R
Sbjct: 52  LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + +S+ +++  YA  GE       E   LFR L+      +   L  +LK+ ++      
Sbjct: 112 NRVSFVTLMQGYALRGE-----FEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGL 166

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  +H  A K+G   + FV  AL++ YS  G +  A+ +FDG+  +D V W  M+  Y+E
Sbjct: 167 ACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSE 226

Query: 238 NGFGEEVFHLFVDLHRSGLCPDD-------ESVQC------------------------V 266
           N   E   + F  +  +G  P+        ++  C                        V
Sbjct: 227 NDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHV 286

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
            G + D+  +  +   A+AI  ++ ++  +V+LW+  +S Y Q   N  A E F+ M+RS
Sbjct: 287 GGALLDMYAKCGDIEDAHAIFEMIPHD--DVILWSFLISRYAQSCQNEQAFEMFLRMMRS 344

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----- 381
            V  +  +    L A A    L LG+QIH   +K G+ S + VGN+L++MY+K       
Sbjct: 345 FVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENS 404

Query: 382 ----------------------CVCGLRTD----------------QFTLASVLRA---S 400
                                 C  G   D                Q T +SVLRA   +
Sbjct: 405 LEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANT 464

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           SS+   + +   I      NDT+    V  +LID Y + G + +A  +FE+    D+ +W
Sbjct: 465 SSIKHAVQIHSLIEKSTFNNDTI----VCNSLIDTYAKCGFIRDALKVFESIVECDVVSW 520

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMH 515
           N++I  Y L   +  ALELF  M+ S  + +++T  + +  CG   ++ QG       M 
Sbjct: 521 NSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMM 580

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEE 574
            + +K   E   C    I+ +  + G + DA     DIP+ P  + W  ++S CV +  +
Sbjct: 581 DHRIKPSMEHYTC----IVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVH--K 634

Query: 575 DLALSIYHQMRLSGVVP-DEFTFAIL 599
           ++AL  Y   ++  + P DE T+ +L
Sbjct: 635 NVALGRYAAEKVLDIEPHDETTYVLL 660



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 411 KQIHVHAIKNDTVA--DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           + +H   ++   VA  D+F +  L++ Y + G +A A  LF+     +  ++  ++ GY 
Sbjct: 65  RAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYA 124

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           L     +ALELF  +   G  ++   + T +K    +        +HA A K G + +  
Sbjct: 125 LRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAF 184

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V + ++D Y  CGA+  A+ +F+ I   D V WT M+S   +N   + AL+ + +MR++G
Sbjct: 185 VGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTG 244

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
             P+ F     +KA+ CL++   G+ IH   +K    ++P VG +L+DMYAKCG+IEDA+
Sbjct: 245 FKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAH 304

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F+ +   + +LW+ ++   AQ    E+  ++F  M    V P+  +  GVL AC+   
Sbjct: 305 AIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIA 364

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
            + E  E  H +  K G E E+   + L+D   +    + + E+  S+      S +  +
Sbjct: 365 FL-ELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTII 423

Query: 769 LGACR 773
           +G C+
Sbjct: 424 VGYCQ 428



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 127/275 (46%), Gaps = 7/275 (2%)

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG--FELDLCVSSGILDMYVKCGAMVDA 546
           +LD    A  ++ C      + G+ +HA  ++ G   +LD   ++ +L+ Y K G +  A
Sbjct: 42  KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATA 101

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +F+ +P  + V++ T++ G    GE + AL ++ +++  G   + F    ++K    +
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A      IHA   KL    + FVG +L+D Y+ CG +  A  +F  +  ++ V W AM+
Sbjct: 162 DAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMV 221

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA--CSYTGLVSEAYENFHLMREKY 724
              +++   E  L  F  M+  G +P+       L A  C  + L+ +      + +  Y
Sbjct: 222 SCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSV-KTLY 280

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
             EP V     L+D   + G  ++A  +   +P +
Sbjct: 281 DTEPHVG--GALLDMYAKCGDIEDAHAIFEMIPHD 313



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 19/205 (9%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +LS+   ++ +H  S+  +  + S+LR   +TS +      H+ I  S+   D  + N+L
Sbjct: 435 ALSVFHEMRAAHMLSTQVT--FSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSL 492

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           +  Y++CG +  A ++F+ + + D++SWNSI++AYA  G       T    LF  + +S 
Sbjct: 493 IDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRA-----TNALELFDRMNKSD 547

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL------VNIYSKFG 208
              + +T   LL +C S+G V       G  L   ++ D  +  ++      V +  + G
Sbjct: 548 IKANDVTFVSLLSVCGSTGLV-----NQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAG 602

Query: 209 KIREA-KFLFDGMQERDVVLWKVML 232
           ++ +A KF+ D       ++W+ +L
Sbjct: 603 RLTDALKFIGDIPSTPSPMVWRALL 627


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 192/575 (33%), Positives = 304/575 (52%), Gaps = 47/575 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D FTL  +L+  +     L + K  H  AI    V D+     LI++Y + G    A  +
Sbjct: 55  DVFTLHELLQLCAK-RRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+      + +WN MI GY  +    +AL+LFS MH  G ++ E T+++ + AC     +
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAI 173

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            + KQ+H  A+K   +    V +  LD+Y KC  + DA  +F ++P    V W+++ +G 
Sbjct: 174 IECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGF 233

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V NG  +  L ++   +  G+   EFT + ++   + L  + +G Q+HA ++K     + 
Sbjct: 234 VQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNL 293

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           FV  SLVD+YAKCG IE +Y +F  M+ +N VLWNAM+   ++H +  E + LFE M+  
Sbjct: 294 FVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQV 353

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G+ P+ VT++ +LSACS+TGLV E    F+L+      EP V HYS +VD LGR+G+T E
Sbjct: 354 GIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDE 413

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A +L+  MPFE +ASM  +LLG+ R+  +    +  AE+L  LEP +   +VLLSN++AA
Sbjct: 414 AWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAA 473

Query: 809 ANQWDDVTSARGEMKRKNVKKDPADL-----------------------IFAKVEGLIKR 845
           +  W++V  AR  ++    KK+                           ++ K+E +   
Sbjct: 474 SGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHE 533

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------ 893
           +++  +  +T   L DV  ++KE  L +HSEKLA A+GLIS PP+  I            
Sbjct: 534 MRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDC 593

Query: 894 ---------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                    ++ ++ +    NRFHH +DG C C D
Sbjct: 594 HSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGD 628



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 1/267 (0%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D  T+   ++ C     L  GK  H  A+  G   D    + ++++Y KCG    A+ +
Sbjct: 54  IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+ +     ++W TMI+G   N E+  AL ++ +M   G    EFT +  + A +   A+
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAI 173

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
            + +Q+H   IKL   S  FVG + +D+YAKC  I+DA  +F+ M  + +V W+++  G 
Sbjct: 174 IECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGF 233

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
            Q+G  EE L LF+  +  G++    T   +LS C+   L+ E  +  H +  K+G    
Sbjct: 234 VQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQ-VHAVIVKHGFHRN 292

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSM 756
           +   + LVD   + G+ +++ E+   M
Sbjct: 293 LFVATSLVDVYAKCGQIEKSYEVFADM 319



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 145/314 (46%), Gaps = 34/314 (10%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           LL+GKS H   ++   + D    N L+ +Y++CG    ARR+FD M  R +ISWN+++A 
Sbjct: 72  LLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAG 131

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y H    N E+V E  +LF  +    T  +  TL+  L  C +   +   + +H  A+K+
Sbjct: 132 YTH----NREDV-EALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKL 186

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            L    FV  A +++Y+K   I++A ++F+ M E+  V W  +   + +NG  EEV  LF
Sbjct: 187 ALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLF 246

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN-------------- 293
               R G+   + +V  +L   + L    E  QV A  +K   + N              
Sbjct: 247 QSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKC 306

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           NVVLWN  ++ + +   +  A+  F  M +  +  + VT+L  L
Sbjct: 307 GQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSIL 366

Query: 340 AAVAGTDNLNLGQQ 353
           +A + T  +  G+ 
Sbjct: 367 SACSHTGLVEEGRH 380



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 29/251 (11%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            TL  LL+LC     +   ++ HG A+  GLV D      L+N+Y+K G+   A+ +FD 
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHE 278
           M  R ++ W  M+  Y  N    E   LF  +HR G    + ++   L    +       
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176

Query: 279 EQVQAYAIKLLLYNNN----------------------------SNVVLWNKKLSGYLQV 310
           +Q+   AIKL L +++                               V W+   +G++Q 
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G +   +  F +  R  +Q    T    L+  A    +  G Q+H   +K GF+  + V 
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVA 296

Query: 371 NSLINMYSKMG 381
            SL+++Y+K G
Sbjct: 297 TSLVDVYAKCG 307



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 137/318 (43%), Gaps = 52/318 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +++ WN  ++GY    ++  A++ F  M R   Q    T    L A A    +   +Q+H
Sbjct: 121 SIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLH 180

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV---C---------------------------- 384
              +K    S+  VG + +++Y+K   +   C                            
Sbjct: 181 TIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHE 240

Query: 385 ------------GLRTDQFTLASVLRASSSLP---EGLHLSKQIHVHAIKNDTVADSFVS 429
                       G++  +FT++S+L   +SL    EG     Q+H   +K+    + FV+
Sbjct: 241 EVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEG----TQVHAVIVKHGFHRNLFVA 296

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           T+L+DVY + G + ++  +F + +  ++  WNAMI  +    +S +A+ LF  M   G  
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIF 356

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQS 548
            +E+T  + + AC    ++++G+      +     E ++   S ++D+  + G   +A  
Sbjct: 357 PNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWK 416

Query: 549 IFNDIP-APDDVAWTTMI 565
           + + +P  P    W +++
Sbjct: 417 LLDKMPFEPTASMWGSLL 434



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 11/179 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL    S + ++ G   HA I+      + F+  +L+ +Y++CG +  +  +F  M ++
Sbjct: 263 SILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEK 322

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++ WN+++A+++           E   LF  +++   F + +T   +L  C  +G V  
Sbjct: 323 NVVLWNAMIASFSRHAHS-----WEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLV-- 375

Query: 178 SETVHGYALKIGLVWDE---FVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            E  H + L +     E        +V++  + GK  EA  L D M  E    +W  +L
Sbjct: 376 EEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 196/561 (34%), Positives = 306/561 (54%), Gaps = 50/561 (8%)

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L +G     QI +  +K D +     S  LI++Y + GS+  A  +F+      L +WN 
Sbjct: 80  LLQGKACHAQILLMGLKTDLL----TSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNT 135

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI     +   ++AL+L   M   G    E TI++ + AC     L + + +HA+A+K+ 
Sbjct: 136 MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAA 195

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            +L++ V++ +LD+Y KCG M DA  +F  +P    V W++M +G V N   + AL+++ 
Sbjct: 196 MDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFR 255

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +   +G+  D+F  + ++ A + L A+ +G+Q++A L K    S+ FV  SL+DMYAKCG
Sbjct: 256 KAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCG 315

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            IE++Y +F+ ++ RN VLWNAM+ GL++H    E + LFE M+  G+ P+ VTF+ VLS
Sbjct: 316 GIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLS 375

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           AC + GLV +  + F LM +++ + P V HYS +VD L RAG+  EA +LI  +PF ASA
Sbjct: 376 ACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASA 435

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
           SM  +LL +CR  G+ E  +  A+KL  +EP +S  Y+LLSN++AA  +WD+V   R  +
Sbjct: 436 SMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLL 495

Query: 823 KRKNVKK----------DPADL-------------IFAKVEGLIKRIKEGGYVPDTDFVL 859
           K  +VKK          D   L             I++K+  ++  +++ GY  +T   L
Sbjct: 496 KESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDL 555

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA----------------- 902
             V E  K+  L +HSEKLA   GL+  PP++ I   K                      
Sbjct: 556 HQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRD 615

Query: 903 ------NRFHHLRDGMCPCAD 917
                 NRFHH ++G C C D
Sbjct: 616 VIVRDTNRFHHFKNGCCSCGD 636



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 133/251 (52%), Gaps = 1/251 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           +K C    +L QGK  HA  +  G + DL  S+ +++MY KCG++  A+ +F+++P+   
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+W TMI     NGEE+ AL +  QM+  G    EFT + ++ A +   AL + + +HA 
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            IK     + FV  +L+D+YAKCG ++DA  +F+ M  R+ V W++M  G  Q+   E+ 
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L LF      G++ D      V+ AC+    + E  +  + +  K G    +   S L+D
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG-KQMNALLSKSGFCSNIFVASSLID 309

Query: 739 ALGRAGRTKEA 749
              + G  +E+
Sbjct: 310 MYAKCGGIEES 320



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 34/324 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+       LL GK+ HA+IL      D   +N L+ MYS+CGS+ +AR++FD+MP R 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SWN+++ +   +GE N     E   L   ++   T  S  T++ +L  C +   +   
Sbjct: 130 LVSWNTMIGSLTQNGEEN-----EALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H +A+K  +  + FV+ AL+++Y+K G +++A  +F+ M +R VV W  M   Y +N
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN---- 293
              E+   LF     +GL  D   +  V+   + L    E +Q+ A   K    +N    
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVA 304

Query: 294 ------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     NVVLWN  +SG  +   +   +  F  M +  + 
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQ 353
            + VTF+  L+A      +  GQ+
Sbjct: 365 PNDVTFVSVLSACGHMGLVRKGQK 388



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 144/327 (44%), Gaps = 46/327 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++V WN  +    Q G+ + A++  + M R    +   T    L A A    L+  Q +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG----CVC--------------------------- 384
              +K+     V V  +L+++Y+K G     VC                           
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       GL+ DQF ++SV+ A + L   +   KQ++    K+   ++ FV+++L
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIE-GKQMNALLSKSGFCSNIFVASSL 307

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G + E+  +F + +  ++  WNAMI G      S + + LF  M   G   ++
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           +T  + + ACG + ++++G++      K      ++   S ++D   + G + +A  + +
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 552 DIPAPDDVA-WTTMISGCVDNGEEDLA 577
            +P     + W ++++ C  +G  +LA
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELA 454



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           ++ GK  +A +  S    + F+ ++L+ MY++CG +  + ++F  +  R+++ WN+++  
Sbjct: 282 MIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMI-- 339

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              SG        E   LF  +++     + +T   +L  C   G V   +       K 
Sbjct: 340 ---SGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKE 396

Query: 189 -GLVWDEFVSGALVNIYSKFGKIREA 213
             L  + F    +V+  S+ G+I EA
Sbjct: 397 HHLAPNVFHYSCMVDTLSRAGQIFEA 422


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 195/559 (34%), Positives = 293/559 (52%), Gaps = 46/559 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + L + K  H  AI    V D+     LI++Y + G    A  +F+      + +WN MI
Sbjct: 71  KSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMI 130

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  S    +AL+LFS MH  G  + E T+++ + AC     + + KQ+H  A+K   +
Sbjct: 131 AGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALD 190

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +  V + ILD+Y KC  + DA  +F  +P    V W+++ +G V NG  + AL ++   
Sbjct: 191 SNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCA 250

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           +  GV   EFT + ++ A + L    +G Q+HA ++K     + FV  SLVD+YA+CG I
Sbjct: 251 QREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQI 310

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           E AY LF  M+ +N V+WNAM+   ++H +  E + LFE M+  G+ P+ VT++ VLS C
Sbjct: 311 EKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVC 370

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV +    F L+     +EP V HYS +VD LGR+G+T EA EL+  MPFE +ASM
Sbjct: 371 SHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASM 430

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             +LLG+CR   +    +  AE+L  LEP +   +VLLSN++AA+  W++V  AR  +K 
Sbjct: 431 WGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKD 490

Query: 825 KNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLD 861
              KK+                           I+ K+E +   +++       +  L D
Sbjct: 491 SGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHD 550

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK-------------------EPLY- 901
           V  E+KE  L +HSEKLA ++GLIS P +  I+ +K                   E L  
Sbjct: 551 VHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVI 610

Query: 902 ---ANRFHHLRDGMCPCAD 917
               NRFHH +DG C C D
Sbjct: 611 VRDTNRFHHFKDGSCSCGD 629



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 1/267 (0%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   I+  ++ C     L  GK  H  A+  G   D    + ++++Y KCG    A+ +
Sbjct: 55  IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+ +     V+W TMI+G   +GE+  AL ++ +M   G    EFT +  + A +   A+
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
            + +Q+H   +KL   S+ FVG +++D+YAKC  I+DA  +F++M  R  V W+++  G 
Sbjct: 175 NECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
            Q+G  EE L LF   +  GVE    T   +LSAC+   L  E  +  H +  K G    
Sbjct: 235 VQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQ-LHAVILKCGFHGN 293

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSM 756
               + LVD   R G+ ++A  L   M
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFAYM 320



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 34/304 (11%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           LL+GKS H   ++   + D    N L+ +Y++CG    AR +FD M  R ++SWN+++A 
Sbjct: 73  LLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAG 132

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y HSGE       +  +LF  +    T  S  TL+  +  C +   +   + +H  ALK+
Sbjct: 133 YTHSGED-----VQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKL 187

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            L  + FV  A++++Y+K   I++A ++F+ M ER +V W  +   Y +NG  EE  HLF
Sbjct: 188 ALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLF 247

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIK-------------------- 287
               R G+   + ++  +L   + L  + E  Q+ A  +K                    
Sbjct: 248 RCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARC 307

Query: 288 --------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                   L  Y  + NVV+WN  ++ + +   +  A+  F  M +  +  + VT+L  L
Sbjct: 308 GQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVL 367

Query: 340 AAVA 343
           +  +
Sbjct: 368 SVCS 371



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 7/203 (3%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  H   L  +   + F+   ++ +Y++C  +  A  +F+KMP+R L++W+S+ A Y  +
Sbjct: 178 KQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQN 237

Query: 133 GEGNAENVTEGFRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           G        E   LFR + RE +  T   TL+ +L  C S         +H   LK G  
Sbjct: 238 GLHE-----EALHLFRCAQREGVELT-EFTLSAILSACASLALKIEGIQLHAVILKCGFH 291

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            + FV+ +LV++Y++ G+I +A  LF  M+ ++VV+W  M+ +++ +    E   LF  +
Sbjct: 292 GNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKM 351

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
            + G+ P++ +   VL V S  G
Sbjct: 352 QQLGIFPNEVTYLSVLSVCSHAG 374



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 62/347 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++V WN  ++GY   G++  A++ F  M R        T    + A A    +N  +Q+H
Sbjct: 122 SIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLH 181

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV---C---------------------------- 384
              LK    S   VG +++++Y+K   +   C                            
Sbjct: 182 TIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHE 241

Query: 385 ------------GLRTDQFTLASVLRASSSLP---EGLHLSKQIHVHAIKNDTVADSFVS 429
                       G+   +FTL+++L A +SL    EG+    Q+H   +K     + FV+
Sbjct: 242 EALHLFRCAQREGVELTEFTLSAILSACASLALKIEGI----QLHAVILKCGFHGNFFVA 297

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            +L+DVY R G + +A  LF   +  ++  WNAMI  +    +S +A+ LF  M   G  
Sbjct: 298 ASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIF 357

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQS 548
            +E+T  + +  C    ++++G+   +  M     E ++   S ++D+  + G   +A  
Sbjct: 358 PNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWE 417

Query: 549 IFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           + N +P  P    W +++  C +          Y+ +RL+ +  ++ 
Sbjct: 418 LLNKMPFEPTASMWGSLLGSCRN----------YNNIRLARIAAEQL 454



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 17/168 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   HA IL      + F+  +L+ +Y+RCG +  A  LF  M  ++++ WN+++A+++ 
Sbjct: 278 GIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSR 337

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                     E   LF  +++   F + +T   +L +C  +G V   +  H ++L   L+
Sbjct: 338 HAHS-----WEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLV--EKGRHYFSL---LM 387

Query: 192 WDEFVS------GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            D  V         +V++  + GK  EA  L + M  E    +W  +L
Sbjct: 388 SDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLL 435


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 204/648 (31%), Positives = 327/648 (50%), Gaps = 76/648 (11%)

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD-QFTLAS 395
           V+ AA       +  QQI     +  F  AV       +++ +M      R+    +L +
Sbjct: 3   VSEAAYPPPPPSSWAQQIRAAAAEGHFCDAV-------SLFLRMRASAAPRSSVPASLPA 55

Query: 396 VLRASSSLPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVYCR---------------- 438
            L++ ++L  GL  L   +H  AI++   AD F + AL+++YC+                
Sbjct: 56  ALKSCAAL--GLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDV 113

Query: 439 ---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
              + +      +F+     D+ +WN ++ G       H+AL     M   G R D  T+
Sbjct: 114 PGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTL 173

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           +T +        +K+G ++H +A ++GF+ D+ V S ++DMY  C     +  +F+++P 
Sbjct: 174 STVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPV 233

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D + W ++++GC  NG  + AL I+ +M  +GV P   TF+ L+     L +L  G+Q+
Sbjct: 234 RDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQL 293

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           HA +I      + F+  SL+DMY KCG I  A+ +F +M   + V W AM++G A HG  
Sbjct: 294 HAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPA 353

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E L LFE M+    +P+ +TF+ VL+ACS+ GLV + ++ F  M   YGI P +EH++ 
Sbjct: 354 REALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAA 413

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           L D LGRAG   EA   I  M  + +AS+   LL ACRV  +T   + VA+K+M LEP  
Sbjct: 414 LADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRS 473

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
             ++V+LSN+++A+ +W++    R  M++K +KKDPA                       
Sbjct: 474 IGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWY 533

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           D I   +    +++   G+VP+T+ V  D+EEE K   L  HSEKLA  +G+ISTP  + 
Sbjct: 534 DRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTK 593

Query: 893 I---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           I                     L+++E +   ANRFHH +DG C C D
Sbjct: 594 IRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGD 641



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 5/208 (2%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +D+  G   H     +    D F+ ++L+ MY+ C    Y+ ++FD +P RD I WNS+L
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLL 243

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A  A +G     +V E   +FR + ++      +T + L+ +C +   +   + +H Y +
Sbjct: 244 AGCAQNG-----SVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVI 298

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
             G   + F+S +L+++Y K G+I  A  +FD M   DVV W  M+  YA +G   E   
Sbjct: 299 CGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALV 358

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG 274
           LF  +      P+  +   VL   S  G
Sbjct: 359 LFERMELGNAKPNHITFLAVLTACSHAG 386



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 145/357 (40%), Gaps = 53/357 (14%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++SL   ++ S    SS  +   + L+   +     LG S HA  + S    DRF  N L
Sbjct: 32  AVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANAL 91

Query: 95  MTMYSR--CGSL-----------------VYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           + +Y +  C  L                    R++FD+M +RD++SWN+++   A  G  
Sbjct: 92  LNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRH 151

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
           +     E     R +          TL+ +L +      V     VHG+A + G   D F
Sbjct: 152 H-----EALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVF 206

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  +L+++Y+   +   +  +FD +  RD +LW  +L   A+NG  EE   +F  + ++G
Sbjct: 207 VGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAG 266

Query: 256 LCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN--------------------- 293
           + P   +   ++ V  +L   R  +Q+ AY I     +N                     
Sbjct: 267 VRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAH 326

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                  + +VV W   + GY   G    A+  F  M   N + + +TFL  L A +
Sbjct: 327 CIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS 383



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 149/385 (38%), Gaps = 85/385 (22%)

Query: 146 LFRSLRESITFTSRL--TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           LF  +R S    S +  +L   LK C + G      ++H  A++ G   D F + AL+N+
Sbjct: 35  LFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNL 94

Query: 204 YSK----------------------FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           Y K                      F  +R+   +FD M ERDVV W  ++   AE G  
Sbjct: 95  YCKVPCSYLDSTGVAIVDVPGSSTAFESVRK---VFDEMIERDVVSWNTLVLGCAEEGRH 151

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------- 287
            E       + R G  PD  ++  VL + ++    +   +V  +A +             
Sbjct: 152 HEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSL 211

Query: 288 LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
           + +Y N +                 +LWN  L+G  Q G    A+  F  M+++ V+   
Sbjct: 212 IDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVP 271

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFT 392
           VTF   +       +L  G+Q+H   +  GF   V + +SLI+MY    C CG    + +
Sbjct: 272 VTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMY----CKCG----EIS 323

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           +A  +    S P                    D    TA+I  Y  +G   EA  LFE  
Sbjct: 324 IAHCIFDKMSSP--------------------DVVSWTAMIMGYALHGPAREALVLFERM 363

Query: 453 DGFDLATWNAMIFGYILSNNSHKAL 477
           +    A  N + F  +L+  SH  L
Sbjct: 364 E-LGNAKPNHITFLAVLTACSHAGL 387


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  342 bits (876), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/583 (33%), Positives = 313/583 (53%), Gaps = 61/583 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  D  T + +++  S+    +   K++H H          FV   L+++Y +   + E
Sbjct: 50  GVFADAITYSELIKCCSARG-AVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEE 108

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNN-SHKALELFSHMHTSGERLDEITIATAVKACG 503
           AE LF+     ++ +W  MI  Y  SN  + KAL+    M   G R +  T ++ ++AC 
Sbjct: 109 AEDLFDEMPERNVVSWTTMISAY--SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACD 166

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L+Q   +H   +K+G E D+ V S ++D+Y K   + +A  +F+++P  D V W +
Sbjct: 167 GLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNS 223

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           +I G   N + + AL+++ +M+ +G + D+ T   +++A + L  LE GRQ+H +++K D
Sbjct: 224 IIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFD 283

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              D  +  +L+DMY KCG++EDA   F +M  ++ + W+ M+ GLAQ+G   + L+LFE
Sbjct: 284 --QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFE 341

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            MK  G  P+ +T +GVL ACS+ GLV + +  F  M++ +G++P  EHY  L+D LGRA
Sbjct: 342 SMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRA 401

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           GR  EA +LI  M  E  +   R LLGACRV  + +   + A+K++ LEP D+  Y+LLS
Sbjct: 402 GRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLS 461

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           NI+A   +W+DV   R  M  + ++K P                        + I  ++ 
Sbjct: 462 NIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLN 521

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK--- 897
            LI+R+   GYVPDT+FVL D+E E+KE +L YHSEKLA  +GL++      +   K   
Sbjct: 522 DLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLR 581

Query: 898 -----------------------EPLYANRFHHLRDGMCPCAD 917
                                  +P+   R+HH +DG+C C D
Sbjct: 582 ICGDCHVFAKVVSRMEHRSIVIRDPI---RYHHFQDGVCSCGD 621



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 185/385 (48%), Gaps = 41/385 (10%)

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           H+A+     M   G   D IT +  +K C     +++GK++H +    G+E  + V + +
Sbjct: 37  HRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTL 96

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           L+MYVK   + +A+ +F+++P  + V+WTTMIS    N   D AL     M   GV P+ 
Sbjct: 97  LNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISA-YSNKLNDKALKCLILMFREGVRPNM 155

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT++ +++A   L  L   RQ+H  +IK    SD FV  +L+D+Y+K  ++++A  +F +
Sbjct: 156 FTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDE 212

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  R+ V+WN+++ G AQ+ +G E L LF+ MK  G   D  T   VL AC+   L+ E 
Sbjct: 213 MPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL-EL 271

Query: 714 YENFHLMREKYG-----------------------------IEPEVEHYSFLVDALGRAG 744
               H+   K+                              +E +V  +S +V  L + G
Sbjct: 272 GRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNG 331

Query: 745 RTKEAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWV---AEKLMALEPFDSSA 798
            +++A EL  SM    S   +  +LG   AC   G  E G +     +KL  ++P     
Sbjct: 332 YSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDP-GREH 390

Query: 799 YVLLSNIFAAANQWDDVTSARGEMK 823
           Y  L ++   A + D+      EM+
Sbjct: 391 YGCLIDLLGRAGRLDEAVKLIHEME 415



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 36/299 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H  I      P  F+ N L+ MY +   L  A  LFD+MP+R+++SW ++++AY++
Sbjct: 74  GKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSN 133

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                A        L    RE +   +  T + +L+ C     +     +H   +K GL 
Sbjct: 134 KLNDKALKC-----LILMFREGVR-PNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLE 184

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV  AL+++YSK+  +  A  +FD M  RD+V+W  ++  +A+N  G E  +LF  +
Sbjct: 185 SDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM 244

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN------------- 293
            R+G   D  ++  VL   +     +LG++    V  +   L+L N              
Sbjct: 245 KRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLED 304

Query: 294 ---------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                      +V+ W+  ++G  Q G +  A+E F +M  S  + + +T L  L A +
Sbjct: 305 ANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS 363



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 202/491 (41%), Gaps = 94/491 (19%)

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           ++    R   ++     F   +T + L+K C + G V   + VH +    G     FV  
Sbjct: 35  DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
            L+N+Y KF  + EA+ LFD M ER+VV W  M+ AY+ N   ++     + + R G+ P
Sbjct: 95  TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRP 153

Query: 259 DDESVQCVLGV---ISDLGKRH--------EEQVQAYAIKLLLYNNNS------------ 295
           +  +   VL     + +L + H        E  V   +  + +Y+  S            
Sbjct: 154 NMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213

Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              ++V+WN  + G+ Q  D + A+  F  M R+    D  T    L A  G   L LG+
Sbjct: 214 PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           Q+H   LK  F   +I+ N+LI+MY    C CG   D         A+S+          
Sbjct: 274 QVHVHVLK--FDQDLILNNALIDMY----CKCGSLED---------ANSAFSR------- 311

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
                ++ D ++ S +   L     +NG   +A  LFE+                     
Sbjct: 312 ----MVEKDVISWSTMVAGL----AQNGYSRQALELFES--------------------- 342

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS-- 530
                     M  SG R + IT+   + AC    ++++G   +  +MK  F +D      
Sbjct: 343 ----------MKESGSRPNYITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGREHY 391

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
             ++D+  + G + +A  + +++   PD V W T++  C  +   DLA  IY   ++  +
Sbjct: 392 GCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLA--IYAAKKIIEL 449

Query: 590 VPDEFTFAILV 600
            P++    IL+
Sbjct: 450 EPEDAGTYILL 460


>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
 gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
          Length = 621

 Score =  342 bits (876), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 192/569 (33%), Positives = 302/569 (53%), Gaps = 64/569 (11%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           I+   I+N    D FV   L+ V     S+  A  +F +    ++  + A+I G +LS  
Sbjct: 51  IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
               + L+  M  S    D   + + +KACGC L LK+G+++H+  +K G   +  +   
Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIK 170

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVA------------------WTTMISGCVDNGEE 574
           ++++Y KCGA  DA+ +F+++P  D VA                  WT MI G V NGE 
Sbjct: 171 LIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGES 230

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           + AL ++  M+   V+P+E T   ++ A S L AL+ GR + + + K     + FVG +L
Sbjct: 231 NRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGAL 290

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           ++MY++CG+I++A  +F+QM  +N + +N+M++G A HG   E ++LF  +   G  P S
Sbjct: 291 INMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSS 350

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           VTF+GVL+ACS+ GL    +E FH M + YGIEP++EHY  +VD LGR GR +EA   I 
Sbjct: 351 VTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIR 410

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            M       M  ALL AC++ G+ E  + VA+ L+A +  DS  Y+LLSN ++++ +W +
Sbjct: 411 MMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKE 470

Query: 815 VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
               R  M+ + ++K+P                        + I+ K+E L + ++  GY
Sbjct: 471 AAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGY 530

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV------------------I 893
            P T+ VL D+E+ EKE AL  HSE+LA  YGLIST P +                   +
Sbjct: 531 TPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKL 590

Query: 894 LSN--KEPLYA---NRFHHLRDGMCPCAD 917
           +SN  +  +     NRFHH  +G+C C D
Sbjct: 591 ISNITRRKIVVRDRNRFHHFENGVCSCGD 619



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 23/221 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS---------- 121
           G+  H+++L      +R +   L+ +Y +CG+   ARR+FD+MP+RD+++          
Sbjct: 149 GREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFD 208

Query: 122 --------WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
                   W +++     +GE N         +FR+++      + +T+  +L  C   G
Sbjct: 209 HGIKDTVCWTAMIDGLVRNGESN-----RALEVFRNMQREDVMPNEVTIVCVLSACSELG 263

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     V  Y  K  +  + FV GAL+N+YS+ G I EA+ +F+ M+E++V+ +  M+ 
Sbjct: 264 ALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIM 323

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +A +G   E   LF  L + G  P   +   VL   S  G
Sbjct: 324 GFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGG 364



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 184/442 (41%), Gaps = 23/442 (5%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D FV   L+ + S    I  A  +F   Q  +V L+  ++     + +  +  HL+  + 
Sbjct: 63  DPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMI 122

Query: 253 RSGLCPDDESVQCVLGVIS-DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
            S L PD  +V  VL      L  +   +V +  +KL L +N S  +   K +  Y + G
Sbjct: 123 NSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRI---KLIELYGKCG 179

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG- 370
               A   F  M   +V   +V             N      I  T   +     ++   
Sbjct: 180 AFEDARRVFDEMPERDVVASTVMI-----------NYYFDHGIKDTVCWTAMIDGLVRNG 228

Query: 371 --NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
             N  + ++  M     +  ++ T+  VL A S L   L L + +  +  K+    + FV
Sbjct: 229 ESNRALEVFRNMQRE-DVMPNEVTIVCVLSACSELG-ALQLGRWVRSYMDKHRIELNHFV 286

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             ALI++Y R G + EA+ +FE     ++ T+N+MI G+ L   S +A+ELF  +   G 
Sbjct: 287 GGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGF 346

Query: 489 RLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
               +T    + AC    + + G ++ H+ A   G E  +     ++D+  + G + +A 
Sbjct: 347 TPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAY 406

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           S    +  APD V    ++S C  +G  +LA  +   + ++    D  T+ +L  A S  
Sbjct: 407 SFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSL-VACKNADSGTYILLSNAYSSS 465

Query: 607 TALEQGRQIHANLIKLDCSSDP 628
              ++  ++  N+ +     +P
Sbjct: 466 GKWKEAAEVRTNMREEGIEKEP 487


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 213/667 (31%), Positives = 337/667 (50%), Gaps = 76/667 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV LWN  +S Y ++GD   +I  F  M+   ++        + +A    D L     I 
Sbjct: 26  NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR-----SESASELFDKLCDRDVIS 80

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             ++ SG+ S  +    L  +Y +M    G+  D  T+ SVL   +     L L K +H 
Sbjct: 81  WNSMISGYVSNGLTERGL-GIYKQM-MYLGIDVDLATIISVLVGCAK-SGTLSLGKAVHS 137

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            AIK+        S  L+D+Y + G +  A  +FE     ++ +W +MI GY     S  
Sbjct: 138 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 197

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ L   M   G +LD + I + + AC     L  GK +H Y   +    +L V + ++D
Sbjct: 198 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMD 257

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG+M  A S+F+ +   D ++W TM+      GE               + PD  T
Sbjct: 258 MYAKCGSMEGANSVFSTMVVKDIISWNTMV------GE---------------LKPDSRT 296

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A + L+ALE+G++IH  +++   SSD  V  +LVD+Y KCG +  A +LF  + 
Sbjct: 297 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 356

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V W  M+ G   HG G E +  F +M+  G+EPD V+FI +L ACS++GL+ + + 
Sbjct: 357 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F++M+  + IEP++EHY+ +VD L R G   +A + I ++P    A++  ALL  CR+ 
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            D E  + VAE++  LEP ++  YVLL+NI+A A +W++V   R ++ +K ++K+P    
Sbjct: 477 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSW 536

Query: 833 -------DLIFA----------KVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERAL 871
                  +L  +          K+E L+K    ++KE GY P T + L++ +E +KE AL
Sbjct: 537 IEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMAL 596

Query: 872 YYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHL 908
             HSEKLA A+GL++ PP   I   K                           +NRFHH 
Sbjct: 597 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 656

Query: 909 RDGMCPC 915
           +DG C C
Sbjct: 657 KDGYCSC 663



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 268/572 (46%), Gaps = 95/572 (16%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           LV+ Y+  G ++E + +FD M++++V LW  M+  YA+ G  +E   LF  +   G+   
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI--- 58

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                         GKR E   + +  KL     + +V+ WN  +SGY+  G     +  
Sbjct: 59  -------------EGKRSESASELFD-KLC----DRDVISWNSMISGYVSNGLTERGLGI 100

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           +  M+   +  D  T +  L   A +  L+LG+ +H   +KS F   +   N+L++MYSK
Sbjct: 101 YKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 160

Query: 380 MG----------------------CVCGLRTDQFTLASVLRASSSLPEGLHL-------- 409
            G                       + G   D ++  +++       EG+ L        
Sbjct: 161 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSI 220

Query: 410 ------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                        K +H +   N+  ++ FV  AL+D+Y + GSM  A  +F      D+
Sbjct: 221 LHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI 280

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHA 516
            +WN M+                      GE + D  T+A  + AC  L  L++GK++H 
Sbjct: 281 ISWNTMV----------------------GELKPDSRTMACILPACASLSALERGKEIHG 318

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           Y +++G+  D  V++ ++D+YVKCG +  A+ +F+ IP+ D V+WT MI+G   +G  + 
Sbjct: 319 YILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNE 378

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISL 634
           A++ +++MR +G+ PDE +F  ++ A S    LEQG +    ++K D + +P +     +
Sbjct: 379 AIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACM 437

Query: 635 VDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           VD+ ++ GN+  AY   + + +  +  +W A+L G   + + E   K+ E  +   +EP+
Sbjct: 438 VDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAE--RVFELEPE 495

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           +  +  VL A  Y    +E +E    MREK G
Sbjct: 496 NTGYY-VLLANIYAE--AEKWEEVKRMREKIG 524



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 209/505 (41%), Gaps = 102/505 (20%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE-GFRLFRSLRESITFTSRLTLAPL 165
           A  LFDK+ DRD+ISWNS+++ Y  +G      +TE G  +++ +          T+  +
Sbjct: 66  ASELFDKLCDRDVISWNSMISGYVSNG------LTERGLGIYKQMMYLGIDVDLATIISV 119

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L  C  SG +   + VH  A+K         S  L+++YSK G +  A  +F+ M ER+V
Sbjct: 120 LVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 179

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQ 280
           V W  M+  Y  +G+ +    L   + + G+  D  ++  +L   +     D GK   + 
Sbjct: 180 VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 239

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV----------QY 330
           ++A        N  SN+ + N  +  Y + G   GA   F  M+  ++          + 
Sbjct: 240 IKA-------NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKP 292

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           DS T    L A A    L  G++IHG  L++G+ S   V N+L+++Y K G V GL    
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG-VLGLARLL 351

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           F +         +P                    D    T +I  Y  +G   EA     
Sbjct: 352 FDM---------IPS------------------KDLVSWTVMIAGYGMHGYGNEA----- 379

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 +AT+N                     M  +G   DE++  + + AC    +L+Q
Sbjct: 380 ------IATFN--------------------EMRDAGIEPDEVSFISILYACSHSGLLEQ 413

Query: 511 GKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISG 567
           G +   Y MK+ F ++  +   + ++D+  + G +  A      +P APD   W  ++ G
Sbjct: 414 GWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPD 592
           C           IYH + L+  V +
Sbjct: 473 C----------RIYHDIELAEKVAE 487



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 62/414 (14%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+L     +  L LGK+ H+  + SS       +N L+ MYS+CG L  A R+F+KM +
Sbjct: 117 ISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 176

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+++SW S++A Y   G  +   +     L + + +       + +  +L  C  SG + 
Sbjct: 177 RNVVSWTSMIAGYTRDGWSDGAII-----LLQQMEKEGVKLDVVAITSILHACARSGSLD 231

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + VH Y     +  + FV  AL+++Y+K G +  A  +F  M  +D++ W  M+    
Sbjct: 232 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---- 287

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNS 295
               GE             L PD  ++ C+L   + L      +++  Y ++   Y+++ 
Sbjct: 288 ----GE-------------LKPDSRTMACILPACASLSALERGKEIHGYILR-NGYSSDR 329

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V   N  +  Y++ G   G      +MI S    D V++ V +A          G  +H
Sbjct: 330 HVA--NALVDLYVKCG-VLGLARLLFDMIPSK---DLVSWTVMIA----------GYGMH 373

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
           G             GN  I  +++M    G+  D+ +  S+L A S    GL        
Sbjct: 374 G------------YGNEAIATFNEMR-DAGIEPDEVSFISILYACSH--SGLLEQGWRFF 418

Query: 416 HAIKNDTVADSFVS--TALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFG 466
           + +KND   +  +     ++D+  R G++++A    E      D   W A++ G
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 19/228 (8%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL    S S L  GK  H  IL +    DR + N L+ +Y +CG L  AR LFD +P +D
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           L+SW  ++A Y   G GN     E    F  +R++      ++   +L  C  SG +   
Sbjct: 360 LVSWTVMIAGYGMHGYGN-----EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 414

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML-- 232
           W    +      I    + +    +V++ S+ G + +A KF+       D  +W  +L  
Sbjct: 415 WRFFYIMKNDFNIEPKLEHY--ACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472

Query: 233 -RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
            R Y +    E+V     +L      P++     +L  I    ++ EE
Sbjct: 473 CRIYHDIELAEKVAERVFELE-----PENTGYYVLLANIYAEAEKWEE 515


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 204/629 (32%), Positives = 326/629 (51%), Gaps = 59/629 (9%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+ S    D   F   L +     +L  G+ +HG  ++ G    +   N+L+NMYSK   
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI------------------------ 418
           +      +F  + +L     +PE   + K  + H +                        
Sbjct: 61  LEEGGVQRFCDSKML---GGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNIL 117

Query: 419 -KNDTVADSFVSTALIDVYCRNGSMAEAEYL------FENKDGFDLATWNAMIFGYILSN 471
            + +T    F      DVY +     E+ YL      FE     D+ +WN +I G   + 
Sbjct: 118 YQVNTYKKVFDEGKTSDVYSKKEK--ESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNG 175

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               AL +   M  +  R D  T+++ +      + L +GK++H YA+++G++ D+ + S
Sbjct: 176 MHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS 235

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY KC  + D+  +F  +P  D ++W ++I+GCV NG  D  L  + QM ++ + P
Sbjct: 236 SLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKP 295

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  +F+ ++ A + LT L  G+Q+H  +I+     + F+  +LVDMYAKCGNI  A  +F
Sbjct: 296 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 355

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M++ + V W AM++G A HG+  + + LF+ M+  GV+P+ V F+ VL+ACS+ GLV 
Sbjct: 356 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 415

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           EA++ F+ M + Y I P +EHY+ + D LGR GR +EA E I  M  E + S+   LL A
Sbjct: 416 EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CRV  + E  + V++KL  ++P +  AYVLLSNI++AA +W D    R  M+ K +KK P
Sbjct: 476 CRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 535

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
           A                       D I   ++ L+++++  GYV DT  VL DVEEE+K 
Sbjct: 536 ACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKR 595

Query: 869 RALYYHSEKLARAYGLISTPPSSVILSNK 897
             L  HSE+LA  +G+ISTP  + I   K
Sbjct: 596 YLLCSHSERLAITFGIISTPAGTTIRVTK 624



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/475 (22%), Positives = 209/475 (44%), Gaps = 85/475 (17%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE--------AKFL 216
           +LK C     +   E+VHG  +++G+ +D +   AL+N+YSKF  + E        +K L
Sbjct: 16  VLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQRFCDSKML 75

Query: 217 FDGMQERDV----------VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
               + R++                +    +NG   ++ ++   ++      D+      
Sbjct: 76  GGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDE------ 129

Query: 267 LGVISDLGKRHEEQVQAYAI----KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            G  SD+  + E++  +Y +    K+       ++V WN  +SG  Q G +  A+     
Sbjct: 130 -GKTSDVYSKKEKE--SYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVRE 186

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--- 379
           M  ++++ DS T    L   A   NL  G++IHG  +++G+ + V +G+SLI+MY+K   
Sbjct: 187 MGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTR 246

Query: 380 -----------------------MGCV-----------------CGLRTDQFTLASVLRA 399
                                   GCV                   ++ +  + +S++ A
Sbjct: 247 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 306

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            + L   LHL KQ+H + I++    + F+++AL+D+Y + G++  A ++F+  + +D+ +
Sbjct: 307 CAHLTT-LHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 365

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQM 514
           W AMI GY L  +++ A+ LF  M   G + + +     + AC    ++ +         
Sbjct: 366 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 425

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             Y +  G E      + + D+  + G + +A    +D+   P    W+T+++ C
Sbjct: 426 QDYRIIPGLEH----YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAAC 476



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 11/225 (4%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           +LL GK  H   + +    D F+ ++L+ MY++C  +  + R+F  +P  D ISWNSI+A
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
               +G        EG + F+ +  +    + ++ + ++  C     +   + +HGY ++
Sbjct: 271 GCVQNGM-----FDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
                + F++ ALV++Y+K G IR A+++FD M+  D+V W  M+  YA +G   +   L
Sbjct: 326 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 385

Query: 248 FVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAI 286
           F  +   G+ P+  +   VL      G++ +  K      Q Y I
Sbjct: 386 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRI 430



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 134/308 (43%), Gaps = 43/308 (13%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S++L   +T+ ++ +  +  D +      + Y   GSL   R++F+ MP RD++SWN+++
Sbjct: 114 SNILYQVNTYKKVFDEGKTSDVYSKKEKESYY--LGSL---RKVFEMMPKRDIVSWNTVI 168

Query: 127 AAYAHSGEGNAENVT--EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           +       GNA+N    +   + R +  +       TL+ +L +      +   + +HGY
Sbjct: 169 S-------GNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 221

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A++ G   D F+  +L+++Y+K  ++ ++  +F  + + D + W  ++    +NG  +E 
Sbjct: 222 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 281

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK-------------LLL 290
              F  +  + + P+  S   ++   + L   H  +Q+  Y I+             + +
Sbjct: 282 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 341

Query: 291 YNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           Y    N+               V W   + GY   G  + AI  F  M    V+ + V F
Sbjct: 342 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 401

Query: 336 LVALAAVA 343
           +  L A +
Sbjct: 402 MAVLTACS 409



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 22/210 (10%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFL 90
           L  F   L+  ++ +H S SS       I+      + L LGK  H  I+ S    + F+
Sbjct: 282 LKFFQQMLIAKIKPNHVSFSS-------IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFI 334

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            + L+ MY++CG++  AR +FDKM   D++SW +++  YA  G     +  +   LF+ +
Sbjct: 335 ASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG-----HAYDAISLFKRM 389

Query: 151 RESITFTSRLTLAPLLKLCLSSGYV-----WASETVHGYALKIGLVWDEFVSGALVNIYS 205
                  + +    +L  C  +G V     + +     Y +  GL  + +   A+ ++  
Sbjct: 390 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGL--EHY--AAVADLLG 445

Query: 206 KFGKIREA-KFLFDGMQERDVVLWKVMLRA 234
           + G++ EA +F+ D   E    +W  +L A
Sbjct: 446 RVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 214/667 (32%), Positives = 337/667 (50%), Gaps = 76/667 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV LWN  +S Y ++GD   +I  F  M+   ++          +A    D L     I 
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE-----SAFELFDKLCDRDVIS 218

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             ++ SG+ S  +    L  +Y +M  + G+  D  T+ SVL   ++    L L K +H 
Sbjct: 219 WNSMISGYVSNGLTERGL-GIYKQMMYL-GIDVDLATIISVLVGCAN-SGTLSLGKAVHS 275

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            AIK+        S  L+D+Y + G +  A  +FE     ++ +W +MI GY     S  
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A++L   M   G +LD + I + + AC     L  GK +H Y   +  E +L V + ++D
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG+M  A S+F+ +   D ++W TMI      GE               + PD  T
Sbjct: 396 MYAKCGSMEAANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRT 434

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A + L+ALE+G++IH  +++   SSD  V  +LVD+Y KCG +  A +LF  + 
Sbjct: 435 MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V W  M+ G   HG G E +  F +M+  G+EPD V+FI +L ACS++GL+ + + 
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F++M+  + IEP++EHY+ +VD L R G   +A E I ++P    A++  ALL  CR  
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNY 614

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            D E  + VAE++  LEP +S  YVLL+NI+A A +W++V   R ++ ++ ++K+P    
Sbjct: 615 HDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSW 674

Query: 833 -------DLIFA----------KVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERAL 871
                  +L  +           +E L+K    ++KE G+ P T + L++ +E +KE AL
Sbjct: 675 IEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMAL 734

Query: 872 YYHSEKLARAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHL 908
             HSEKLA A+GL++ PP   I   K                            NRFHH 
Sbjct: 735 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHF 794

Query: 909 RDGMCPC 915
           +DG C C
Sbjct: 795 KDGYCSC 801



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 283/615 (46%), Gaps = 103/615 (16%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T + +L+LC         + VH       +  DE +   LV+ Y+  G ++E + +FD M
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           ++++V LW  M+  YA+ G  +E   LF  +   G+                 GKR E  
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI----------------EGKRPES- 203

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
               A +L     + +V+ WN  +SGY+  G     +  +  M+   +  D  T +  L 
Sbjct: 204 ----AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------- 384
             A +  L+LG+ +H   +KS F   +   N+L++MYSK G +                 
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319

Query: 385 ---------------------------GLRTDQFTLASVLRA---SSSLPEGLHLSKQIH 414
                                      G++ D   + S+L A   S SL  G    K +H
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG----KDVH 375

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            +   N+  ++ FV  AL+D+Y + GSM  A  +F      D+ +WN MI          
Sbjct: 376 DYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------- 425

Query: 475 KALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
                       GE + D  T+A  + AC  L  L++GK++H Y +++G+  D  V++ +
Sbjct: 426 ------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +D+YVKCG +  A+ +F+ IP+ D V+WT MI+G   +G  + A++ +++MR +G+ PDE
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILF 651
            +F  ++ A S    LEQG +    ++K D + +P +     +VD+ ++ GN+  AY   
Sbjct: 534 VSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFI 592

Query: 652 KQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           + + +  +  +W A+L G   + + E   K+ E  +   +EP++  +  VL A  Y    
Sbjct: 593 ETLPIAPDATIWGALLCGCRNYHDIELAEKVAE--RVFELEPENSGYY-VLLANIYAE-- 647

Query: 711 SEAYENFHLMREKYG 725
           +E +E    +REK G
Sbjct: 648 AEKWEEVKRLREKIG 662



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 144/630 (22%), Positives = 250/630 (39%), Gaps = 137/630 (21%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ L+   +KS   + + SS    +L+          GK  H+ I ++S   D  L   L
Sbjct: 85  AMELICMCKKSELETKTYSS----VLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKL 140

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN---------AENVTEG-- 143
           ++ Y+ CG L   RR+FD M  +++  WN +++ YA  G+            E   EG  
Sbjct: 141 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 144 ----FRLFRSL--RESITFTSRL-----------------------------TLAPLLKL 168
               F LF  L  R+ I++ S +                             T+  +L  
Sbjct: 201 PESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C +SG +   + VH  A+K         S  L+++YSK G +  A  +F+ M ER+VV W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQA 283
             M+  Y  +G  +    L   + + G+  D  ++  +L   +     D GK   + ++A
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV----------QYDSV 333
                   N  SN+ + N  +  Y + G    A   F  M+  ++          + DS 
Sbjct: 381 -------NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSR 433

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
           T    L A A    L  G++IHG  L++G+ S   V N+L+++Y K G V GL    F +
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG-VLGLARLLFDM 492

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
                    +P                    D    T +I  Y  +G   EA        
Sbjct: 493 ---------IPS------------------KDLVSWTVMIAGYGMHGYGNEA-------- 517

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
              +AT+N                     M  +G   DE++  + + AC    +L+QG +
Sbjct: 518 ---IATFN--------------------EMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 514 MHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
              Y MK+ F ++  +   + ++D+  + G +  A      +P APD   W  ++ GC +
Sbjct: 555 FF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRN 613

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             + +LA  +    R+  + P+   + +L+
Sbjct: 614 YHDIELAEKVAE--RVFELEPENSGYYVLL 641



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 142/348 (40%), Gaps = 54/348 (15%)

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           +NA I  +    +   A+EL      S   L+  T ++ ++ C  L     GK++H+   
Sbjct: 69  YNAKILHFCQLGDLENAMELICMCKKS--ELETKTYSSVLQLCAGLKSFTDGKKVHSIIK 126

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP----------------------- 556
            +   +D  +   ++  Y  CG + + + +F+ +                          
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 557 ----------------------------DDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                                       D ++W +MISG V NG  +  L IY QM   G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           +  D  T   ++   +    L  G+ +H+  IK           +L+DMY+KCG+++ A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M  RN V W +M+ G  + G  +  +KL + M+  GV+ D V    +L AC+ +G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            +    ++ H   +   +E  +   + L+D   + G  + A  +  +M
Sbjct: 367 SLDNG-KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 19/228 (8%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L    S S L  GK  H  IL +    DR + N L+ +Y +CG L  AR LFD +P +D
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           L+SW  ++A Y   G GN     E    F  +R++      ++   +L  C  SG +   
Sbjct: 498 LVSWTVMIAGYGMHGYGN-----EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML-- 232
           W    +      I    + +    +V++ S+ G + +A    + +    D  +W  +L  
Sbjct: 553 WRFFYIMKNDFNIEPKLEHY--ACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610

Query: 233 -RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
            R Y +    E+V     +L      P++     +L  I    ++ EE
Sbjct: 611 CRNYHDIELAEKVAERVFELE-----PENSGYYVLLANIYAEAEKWEE 653


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 200/649 (30%), Positives = 319/649 (49%), Gaps = 117/649 (18%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D   L ++ +  + L     + KQIH  +  +    D+FV  ++  +Y R G M +
Sbjct: 111 GLIPDSHVLPNLFKVCAEL-SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169

Query: 445 AEYLFENKDGFDLAT-----------------------------------WNAMIFGYIL 469
           A  +F+     D+ T                                   WN ++ G+  
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S    +A+ +F  +H  G   D++T+++ + + G   ML  G+ +H Y +K G   D CV
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDD------------------------------- 558
            S ++DMY K G +    S+FN     +                                
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349

Query: 559 ----VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+WT++I+GC  NG++  AL ++ +M+++GV P+  T   ++ A   + AL  GR 
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H   +++    +  VG +L+DMYAKCG I  + I+F  M  +N V WN+++ G + HG 
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            +E + +FE +    ++PD ++F  +LSAC   GL  E ++ F +M E+YGI+P +EHYS
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +V+ LGRAG+ +EA +LI  MPFE  + +  ALL +CR+Q + +  +  AEKL  LEP 
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +   YVLLSNI+AA   W +V S R +M+   +KK+P                       
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP--- 888
            D I  K++ + K +++ G+ P+ DF L DVEE+E+E+ L+ HSEKLA  +GL++TP   
Sbjct: 650 IDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709

Query: 889 PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P  VI                   + +E      NRFHH +DG+C C D
Sbjct: 710 PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 145/601 (24%), Positives = 268/601 (44%), Gaps = 82/601 (13%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            HARIL S    D +++  L+  YS       A  +   +PD  + S++S++ A      
Sbjct: 37  AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT---- 92

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
             A+  T+   +F  +           L  L K+C         + +H  +   GL  D 
Sbjct: 93  -KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           FV G++ ++Y + G++ +A+ +FD M ++DVV    +L AYA  G  EEV  +  ++  S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
           G+                                      +N+V WN  LSG+ + G + 
Sbjct: 212 GI-------------------------------------EANIVSWNGILSGFNRSGYHK 234

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            A+  F  +       D VT    L +V  ++ LN+G+ IHG  +K G      V +++I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294

Query: 375 NMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           +MY K G V G+ +  +QF +                               ++ V  A 
Sbjct: 295 DMYGKSGHVYGIISLFNQFEM------------------------------MEAGVCNAY 324

Query: 433 IDVYCRNGSMAEAEYLF----ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           I    RNG + +A  +F    E     ++ +W ++I G   +    +ALELF  M  +G 
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           + + +TI + + ACG +  L  G+  H +A++     ++ V S ++DMY KCG +  +Q 
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +FN +P  + V W ++++G   +G+    +SI+  +  + + PD  +F  L+ A   +  
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504

Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAM 665
            ++G + +  ++  +    P +     +V++  + G +++AY L K+M    ++ +W A+
Sbjct: 505 TDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563

Query: 666 L 666
           L
Sbjct: 564 L 564



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 160/354 (45%), Gaps = 36/354 (10%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           + Q H   +K+    D ++S  LI  Y       +A+ + ++     + +++++I+    
Sbjct: 34  TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +++ +FS M + G   D   +    K C  L   K GKQ+H  +  SG ++D  V
Sbjct: 94  AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPD-------------------------------- 557
              +  MY++CG M DA+ +F+ +   D                                
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213

Query: 558 ---DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+W  ++SG   +G    A+ ++ ++   G  PD+ T + ++ +      L  GR 
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH  +IK     D  V  +++DMY K G++     LF Q +M    + NA + GL+++G 
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            ++ L++FE  K   +E + V++  +++ C+  G   EA E F  M +  G++P
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP 386



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 67/341 (19%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GK  H     S    D F+  ++  MY RCG +  AR++FD+M D+D+++ +++L AYA
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193

Query: 131 HSG-----------------EGNA---ENVTEGFRLFRSLRESITFTSRL---------- 160
             G                 E N      +  GF      +E++    ++          
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T++ +L     S  +     +HGY +K GL+ D+ V  A++++Y K G +     LF+  
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +  +  +    +   + NG  ++   +F                       +L K    +
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMF-----------------------ELFKEQTME 350

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           +              NVV W   ++G  Q G +  A+E F  M  + V+ + VT    L 
Sbjct: 351 L--------------NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           A      L  G+  HG  ++      V VG++LI+MY+K G
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 13/217 (5%)

Query: 70  LLGKSTHA----RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR----DLIS 121
           + GKS H      + N  ++ +  + N  +T  SR G +  A  +F+   ++    +++S
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           W SI+A  A +G+       E   LFR ++ +    + +T+  +L  C +   +    + 
Sbjct: 356 WTSIIAGCAQNGKD-----IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           HG+A+++ L+ +  V  AL+++Y+K G+I  ++ +F+ M  +++V W  ++  ++ +G  
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +EV  +F  L R+ L PD  S   +L     +G   E
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 211/637 (33%), Positives = 328/637 (51%), Gaps = 57/637 (8%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YAI +       N ++WN    G+    D   A++ +V MI   +  +  TF   L + A
Sbjct: 27  YAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCA 86

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
            +     GQQIHG  LK GF   + V  SLI+MY++ G                      
Sbjct: 87  KSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNG---------------------- 124

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              L  ++++   +   D V+     TALI  Y   G +  A+ +F+     D+ +WNAM
Sbjct: 125 --RLEDAQKVFDRSSHRDVVS----YTALITGYASRGYIESAQKMFDEIPIKDVVSWNAM 178

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  + N  KALELF  M  +  + DE T+AT V AC     ++ G+Q+H++    GF
Sbjct: 179 ISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGF 238

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +L + + ++D+Y KCG +  A  +   +   D ++W T+I G         AL ++ +
Sbjct: 239 GSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQE 298

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK----LDCSSDPFVGISLVDMYA 639
           M  SG  P++ T   ++ A + L A++ GR IH  + K    +  ++   +  SL+DMYA
Sbjct: 299 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYA 358

Query: 640 KCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           KCG+I+ A  +       R+   WNAM+ G A HG       +F  M+ +G+EPD +TF+
Sbjct: 359 KCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 418

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
           G+LSACS++G++      F  MR+ Y I P++EHY  ++D LG +G  KEA E+I +MP 
Sbjct: 419 GLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPM 478

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E    +  +LL AC++ G+ E G+  A+KL+ +EP +  +YVLLSNI+A A +W++V   
Sbjct: 479 EPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKI 538

Query: 819 RGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------------------GYVPD 854
           R  +  K +KK        +++ ++     G                        G+VPD
Sbjct: 539 RTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPD 598

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
           T  VL ++EEE KE AL +HSEKLA A+GLIST P +
Sbjct: 599 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGT 635



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 38/260 (14%)

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           L+ C+ S   D       +  A S+F  IP P+ + W  M  G   + +   AL +Y  M
Sbjct: 13  LEFCILSPHFD------GLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM 66

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
              G++P+ FTF  L+K+ +     ++G+QIH +++KL    D +V  SL+ MYA+ G +
Sbjct: 67  ISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRL 126

Query: 645 EDA--------------------------YI-----LFKQMDMRNTVLWNAMLVGLAQHG 673
           EDA                          YI     +F ++ +++ V WNAM+ G A+ G
Sbjct: 127 EDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETG 186

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           N ++ L+LF++M    V+PD  T   V+SAC+ +G + E     H     +G    ++  
Sbjct: 187 NYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSI-ELGRQVHSWINDHGFGSNLKIV 245

Query: 734 SFLVDALGRAGRTKEAGELI 753
           + L+D   + G  + A EL+
Sbjct: 246 NALIDLYSKCGEVETACELL 265



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 144/311 (46%), Gaps = 39/311 (12%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           ++ + S   D      L+T Y+  G +  A+++FD++P +D++SWN++++ YA +G    
Sbjct: 131 KVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETG---- 186

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            N  +   LF+ + ++       T+A ++  C  SG +     VH +    G   +  + 
Sbjct: 187 -NYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL+++YSK G++  A  L +G+  +DV+ W  ++  Y      +E   LF ++ RSG  
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305

Query: 258 PDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLL-----LYNN------ 293
           P+D ++  +L   + LG             K+ +  V   A  L      +Y        
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDA 365

Query: 294 ----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                     N ++  WN  + G+   G  + A + F  M ++ ++ D +TF+  L+A +
Sbjct: 366 APQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 425

Query: 344 GTDNLNLGQQI 354
            +  L+LG+ I
Sbjct: 426 HSGMLDLGRNI 436



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 117/549 (21%), Positives = 213/549 (38%), Gaps = 133/549 (24%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA  +F+ +P+ + + WN +   +A S +          +L+  +       +  T  
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDP-----VSALKLYVVMISLGLLPNFFTFP 79

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C  S      + +HG+ LK+G   D +V  +L+++Y++ G++ +A+ +FD    R
Sbjct: 80  FLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR 139

Query: 224 DVVL-------------------------------WKVMLRAYAENGFGEEVFHLFVDLH 252
           DVV                                W  M+  YAE G  ++   LF ++ 
Sbjct: 140 DVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMM 199

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAY----------------------- 284
           ++ + PD+ ++  V+   +     +LG++    +  +                       
Sbjct: 200 KTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVE 259

Query: 285 -AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            A +LL   +N +V+ WN  + GY  +     A+  F  M+RS    + VT L  L A A
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 319

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGN------SLINMYSKMGCVCGLRTDQFTLASVL 397
               +++G+ IH    K      V+V N      SLI+MY+K G +      Q + +S  
Sbjct: 320 HLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDA--APQVSDSSAF 375

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
             S S    +     +H  A             A  D++ R             K+G + 
Sbjct: 376 NRSLSTWNAMIFGFAMHGRA------------NAAFDIFSR-----------MRKNGIEP 412

Query: 458 ATWNAMIFGYILSNNSHKA-LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
              + + F  +LS  SH   L+L  ++  S  +  +  I   ++  GC+           
Sbjct: 413 ---DDITFVGLLSACSHSGMLDLGRNIFRSMRQ--DYNITPKLEHYGCM----------- 456

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
                   +DL   SG+           +A+ + N +P  PD V W +++  C  +G  +
Sbjct: 457 --------IDLLGHSGLFK---------EAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 499

Query: 576 LALSIYHQM 584
           L  S   ++
Sbjct: 500 LGESFAKKL 508



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H+ I +     +  + N L+ +YS+CG +  A  L + + ++D+ISWN+++  Y 
Sbjct: 225 LGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYT 284

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--I 188
           H          E   LF+ +  S    + +T+  +L  C   G +     +H Y  K   
Sbjct: 285 H-----MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 339

Query: 189 GLVWDEFVS--GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVF 245
           G+V     S   +L+++Y+K G I  A  + D     R +  W  M+  +A +G     F
Sbjct: 340 GVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAF 399

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
            +F  + ++G+ PDD +   +L   S     DLG+
Sbjct: 400 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 197/587 (33%), Positives = 316/587 (53%), Gaps = 56/587 (9%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L+ ++ T    +++ S+L + LH  +Q H  A+      D FVS+AL+D+Y + G + +A
Sbjct: 148 LKPNRSTFPCAIKSCSALLD-LHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDA 206

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH--MHTSGER------LDEITIAT 497
             LF+     ++ +W +MI GY+ ++++H+AL LF    +  SG        +D I + +
Sbjct: 207 RTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVS 266

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            + AC  +      + +H + +K GFE DL V + ++D Y KCG +  ++ +F+ +   D
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIH 616
            ++W ++I+    NG    ++ I+H+M   G +  +  T + ++ A +   +   G+ IH
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             +IK+   S+ FVG S++DMY KCG +E A   F +M  +N   W+AM+ G   HG+ +
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK 446

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L++F +M   GV+P+ +TF+ VL+ACS+ GL+ E +  F  M  ++ +EP VEHY  +
Sbjct: 447 EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCM 506

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG  KEA +LI  M       +  ALLGACR+  + + G+  A KL  L+P + 
Sbjct: 507 VDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNC 566

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
             YVLLSNI+A A +W+DV   R  MK   + K P                        +
Sbjct: 567 GYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHE 626

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I+  +E L  +++E GYVPD   VL DV  EEKE  L  HSEKLA A+G+++T P + I
Sbjct: 627 KIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTI 686

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                + ++E +   + RFHH RDG+C C D
Sbjct: 687 HIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGD 733



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 228/511 (44%), Gaps = 69/511 (13%)

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
           Y + +NV  WN  ++   + GD+  A+  F +M + +++ +  TF  A+ + +   +L+ 
Sbjct: 111 YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHS 170

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------------- 388
           G+Q H   L  GF   + V ++L++MYSK G +   RT                      
Sbjct: 171 GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 230

Query: 389 -----------------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                        D   + SVL A S + E   +++ +H   IK
Sbjct: 231 NDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEK-SITEGVHGFLIK 289

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                D  V   L+D Y + G +  +  +F+     D+ +WN++I  Y  +  S +++E+
Sbjct: 290 RGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEI 349

Query: 480 FSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           F  M   GE   + +T++  + AC      + GK +H   +K G E ++ V + I+DMY 
Sbjct: 350 FHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYC 409

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG +  A+  F+ +   +  +W+ M++G   +G    AL ++++M ++GV P+  TF  
Sbjct: 410 KCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVS 469

Query: 599 LVKASSCLTALEQG-RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           ++ A S    LE+G     A   + D          +VD+  + G +++A+ L K M +R
Sbjct: 470 VLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLR 529

Query: 658 -NTVLWNAMLVGLAQHGN---GE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
            + V+W A+L     H N   GE    KLFE      ++P +  +  +LS         E
Sbjct: 530 PDFVVWGALLGACRMHKNVDLGEISARKLFE------LDPKNCGYYVLLSNIYADAGRWE 583

Query: 713 AYENFHLMREKYGIEPEVEHYSF-LVDALGR 742
             E   ++ +  G+   V+   F LVD  GR
Sbjct: 584 DVERMRILMKNSGL---VKPPGFSLVDIKGR 611



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 182/390 (46%), Gaps = 54/390 (13%)

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           D  ++ +WN++I     S +S +AL  FS M     + +  T   A+K+C  LL L  G+
Sbjct: 113 DKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGR 172

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           Q H  A+  GFE DL VSS ++DMY KCG + DA+++F++I   + V+WT+MI+G V N 
Sbjct: 173 QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 232

Query: 573 EEDLALSIYHQMRL--SG------VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +   AL ++ +  +  SG      V  D      ++ A S ++       +H  LIK   
Sbjct: 233 DAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGF 292

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             D  V  +L+D YAKCG +  +  +F  M  R+ + WN+++   AQ+G   E++++F  
Sbjct: 293 EGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 352

Query: 685 MKAHG-VEPDSVTFIGVLSACSYT-----------------------------------G 708
           M   G +  ++VT   VL AC+++                                   G
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCG 412

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH--- 765
            V  A + F  MREK      V+ +S +V   G  G  KEA E+   M        +   
Sbjct: 413 KVEMARKAFDRMREK-----NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITF 467

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFD 795
            ++L AC   G  E G W   K M+ E FD
Sbjct: 468 VSVLAACSHAGLLEEG-WHWFKAMSHE-FD 495



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 53/333 (15%)

Query: 99  SRCGSLVYARR---------LFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           S C   V  RR         LF+K  D+ ++ SWNS++A  A SG+       E  R F 
Sbjct: 87  SICAGAVLRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDS-----VEALRAFS 141

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
           S+R+     +R T    +K C +   + +    H  AL  G   D FVS ALV++YSK G
Sbjct: 142 SMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCG 201

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD--LHRSG------LCPDD 260
           ++R+A+ LFD +  R++V W  M+  Y +N        LF +  +  SG      +C D 
Sbjct: 202 ELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP 261

Query: 261 ESVQCVLGVISDLGKRH-EEQVQAYAIK------LLLYNN-------------------- 293
            ++  VL   S + ++   E V  + IK      L + N                     
Sbjct: 262 IAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDG 321

Query: 294 --NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNL 350
               +V+ WN  ++ Y Q G +  ++E F  M++   + Y++VT    L A A + +  L
Sbjct: 322 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 381

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           G+ IH   +K G  S V VG S+I+MY K G V
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKV 414



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      S+  + +  H  ++      D  + N LM  Y++CG L  +RR+FD M +R
Sbjct: 266 SVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER 325

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           D+ISWNSI+A YA +G       TE   +F R +++     + +TL+ +L  C  SG   
Sbjct: 326 DVISWNSIIAVYAQNGMS-----TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQR 380

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +H   +K+GL  + FV  +++++Y K GK+  A+  FD M+E++V  W  M+  Y 
Sbjct: 381 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 440

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +G  +E   +F +++ +G+ P+  +   VL   S  G
Sbjct: 441 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 478



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 178/415 (42%), Gaps = 60/415 (14%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+  H + L     PD F+++ L+ MYS+CG L  AR LFD++  R+++SW S++ 
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 128 AYAHSGEGNAENVTEGFRLFR--------SLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
            Y  +     ++      LF+        S  +       + +  +L  C        +E
Sbjct: 227 GYVQN-----DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITE 281

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            VHG+ +K G   D  V   L++ Y+K G++  ++ +FDGM ERDV+ W  ++  YA+NG
Sbjct: 282 GVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNG 341

Query: 240 FGE---EVFHLFV---DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
                 E+FH  V   +++ + +      + C       LGK   +QV    IK+ L   
Sbjct: 342 MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQV----IKMGL--- 394

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            SNV +    +  Y + G    A + F  M   NV+  S       A VAG      G  
Sbjct: 395 ESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS-------AMVAG-----YGMH 442

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLHLS 410
            H       FY         +NM        G++ +  T  SVL A S    L EG H  
Sbjct: 443 GHAKEALEVFYE--------MNM-------AGVKPNYITFVSVLAACSHAGLLEEGWHWF 487

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMI 464
           K +  H    +   + +    ++D+  R G + EA  L +  K   D   W A++
Sbjct: 488 KAMS-HEFDVEPGVEHY--GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 242/818 (29%), Positives = 393/818 (48%), Gaps = 90/818 (11%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM- 220
           L  L+  C   G + A   +H          +  +  AL+++YSK G + +AK  FD + 
Sbjct: 10  LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 69

Query: 221 --QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE-SVQCVLGVISDLGKRH 277
              +RDVV W  M+ A+  NG   E   LF D+   G  P +  +   VL    + G   
Sbjct: 70  RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLS 129

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
            E V+A   +++         +    +  Y ++G    A E F   +R + +  S + + 
Sbjct: 130 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF---LRKSDEEPSTSLVT 186

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
             A ++        Q+    +L+  FY+        +N+        G +    TL SVL
Sbjct: 187 CSAMISACWQNGWPQE----SLRL-FYA--------MNLE-------GTKPSGVTLVSVL 226

Query: 398 RASSSLPEG----LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
            A S LP G      L + + V +   D V    + T L+  Y R+  ++ A   F+   
Sbjct: 227 NACSMLPVGSATAFVLEQAMEVVSATRDNV----LGTTLLTTYARSNDLSRARATFDAIQ 282

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ--- 510
             D+ +WNAM   Y+  +   +AL LF  M   G R    T  TA+ AC           
Sbjct: 283 SPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI 342

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP--DDVAWTTMISGC 568
           GK++ +   ++G E D  V++  L+MY KCG++ DA+++F  I     D + W +M++  
Sbjct: 343 GKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAY 402

Query: 569 VDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
             +G    A  ++  M    +V P++ TF  ++ AS+  T++ QGR+IHA ++     SD
Sbjct: 403 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESD 462

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQ--MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
             +  +L++MYAKCG+++DA  +F +   +  + + W +++ G AQ+G  E  LKLF  M
Sbjct: 463 TVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTM 522

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +  GV P+ +TFI  L+AC++ G + +  E    M   +GI P  +H+S +VD LGR GR
Sbjct: 523 QQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGR 582

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA E +L    +A      ALL AC+   + E G+  AE++M L+P  +S+Y++L+++
Sbjct: 583 LDEA-EKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASM 641

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
           +AAA +W++  + R  M  K ++ DP                       ++ I+ ++E L
Sbjct: 642 YAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERL 701

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI------ 893
              IK  GYV DT  VL DV +E KER L  HSEKLA A+GL+STP   P  VI      
Sbjct: 702 HWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVC 761

Query: 894 ------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                       ++ ++ L   ++R+HH   G C C D
Sbjct: 762 SDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGD 799



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 160/687 (23%), Positives = 281/687 (40%), Gaps = 150/687 (21%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP---DRDLISWNS 124
           +L  G+  H++I +     +  L N L++MYS+CGSL+ A++ FD++P    RD+++WN+
Sbjct: 22  NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNA 81

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASE--TV 181
           +++A+  +G        E  +LFR +  +     + +T   +L  C+ +G +   +   +
Sbjct: 82  MISAFLRNGSAR-----EALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAI 136

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF----DGMQERDVVLWKVMLRAYAE 237
           HG  +  G+  + FV  ALV+ Y K G + +A  +F    D      +V    M+ A  +
Sbjct: 137 HGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQ 196

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG---------KRHEEQVQA----- 283
           NG+ +E   LF  ++  G  P   ++  VL   S L          ++  E V A     
Sbjct: 197 NGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNV 256

Query: 284 YAIKLLLYNNNSN----------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
               LL     SN                VV WN   + YLQ      A+  F  M+   
Sbjct: 257 LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEG 316

Query: 328 VQYDSVTFLVALAAVAGTDNLN---LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
           V+    TF+ AL A A         +G++I     ++G      V N+ +NMY+K G + 
Sbjct: 317 VRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLA 376

Query: 385 GLRT----------------------------------------------DQFTLASVLR 398
             R                                               ++ T  +VL 
Sbjct: 377 DARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 436

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFD 456
           AS+S    +   ++IH   + N   +D+ +  AL+++Y + GS+ +A+ +F+  + +  D
Sbjct: 437 ASTSR-TSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQED 495

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  W +++ GY     + +AL+LF  M   G R + IT  +A+ AC     L+QG +   
Sbjct: 496 VIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCE--- 552

Query: 517 YAMKSGFELDLCVS------SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
             + SG   D  +       S I+D+  +CG + +A+ +       D + W  ++  C +
Sbjct: 553 --LLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKN 610

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           + E                                   LE+G +    +++L    DP V
Sbjct: 611 SKE-----------------------------------LERGERCAERIMQL----DPEV 631

Query: 631 G---ISLVDMYAKCGNIEDAYILFKQM 654
               I L  MYA  G   +A  + K M
Sbjct: 632 ASSYIVLASMYAAAGRWNEAATIRKTM 658



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 24/337 (7%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +R +   L +++ A S L   L   ++IH      D   +S +  ALI +Y + GS+ +A
Sbjct: 3   VRPNCHALIALVNACSCLG-NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 446 EYLFEN---KDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKA 501
           +  F+        D+ TWNAMI  ++ + ++ +AL+LF  M H      + +T  + + +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 502 C--GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF----NDIPA 555
           C    LL L+  + +H   + +G E +  V + ++D Y K G++ DA  +F    ++ P+
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT-------A 608
              V  + MIS C  NG    +L +++ M L G  P   T   ++ A S L         
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LEQ  ++      +  + D  +G +L+  YA+  ++  A   F  +   + V WNAM   
Sbjct: 242 LEQAMEV------VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAA 295

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
             QH    E L LFE M   GV P   TFI  L+AC+
Sbjct: 296 YLQHHRPREALVLFERMLLEGVRPSVATFITALTACA 332



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 110/228 (48%), Gaps = 19/228 (8%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V P+      LV A SCL  L  GR+IH+ +   D   +  +G +L+ MY+KCG++ DA 
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 649 ILFKQM---DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDSVTFIGVLSAC 704
             F ++     R+ V WNAM+    ++G+  E L+LF DM   G   P+SVTF+ VL +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 705 SYTGLVS-EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
              GL+S E     H      GIE E    + LVD+ G+ G   +A E+ L    E  ++
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 764 ---MHRALLGACRVQGDTETGKWVAEKL-----MALEPFDSSAYVLLS 803
                 A++ AC   G      W  E L     M LE    S   L+S
Sbjct: 183 SLVTCSAMISACWQNG------WPQESLRLFYAMNLEGTKPSGVTLVS 224



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 8/182 (4%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L  + S + +  G+  HAR++++    D  + N L+ MY++CGSL  A+ +FDK  
Sbjct: 431 FVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSS 490

Query: 116 --DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
               D+I+W S++A YA  G+          +LF ++++     + +T    L  C   G
Sbjct: 491 SNQEDVIAWTSLVAGYAQYGQAE-----RALKLFWTMQQQGVRPNHITFISALTACNHGG 545

Query: 174 YV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            +    E + G     G+V        +V++  + G++ EA+ L +   + DV+ W  +L
Sbjct: 546 KLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 605

Query: 233 RA 234
            A
Sbjct: 606 DA 607


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 258/938 (27%), Positives = 427/938 (45%), Gaps = 151/938 (16%)

Query: 114 MPDRDLISWNSILAAYAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           MP R   SW + ++  A  G E  A      F L R +RE     S   LA L+  C   
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTA------FTLLRVMRERDVPLSGFALASLVTACEHR 54

Query: 173 GY---VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           G+         +H    + GL+ + ++  AL+++Y   G +  A+ LF  M +R+VV W 
Sbjct: 55  GWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWT 114

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE----QVQAYA 285
            ++ A + NG  EE    +  + + G+  +  ++     V+S  G   +E    QV A+ 
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALA---TVVSLCGALEDEVAGLQVTAHV 171

Query: 286 I--KLLLYNNNSNVVL--------------------------WNKKLSGYLQVGDNHGAI 317
           +   LL + + +N ++                          WN  +S Y     +H  +
Sbjct: 172 VVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMY-----SHEEV 226

Query: 318 --ECFV---NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             +CF+   +M    V+ D  T    ++  A +D + LG  IH   + SG + +V + N+
Sbjct: 227 YSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA 286

Query: 373 LINMYSKMG--------------------------------CVCGLRT------------ 388
           L+NMYS  G                                CV  L T            
Sbjct: 287 LVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPP 346

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +  T +S L A SS PE L   + IH   ++        +  +L+ +Y +  SM + E +
Sbjct: 347 NSMTFSSALGACSS-PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERV 405

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE+   +D+ + N +  GY    +   A+ +FS M  +G + + IT+      C  L  L
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDL 465

Query: 509 KQ-GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
              G  +HAY  ++G   D  +++ ++ MY  CG +  +  IF+ I     ++W  +I+ 
Sbjct: 466 HSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAA 525

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCS 625
            V +G  + A+ ++   + +G   D F  A  + +S+ L +LE+G Q+H   +K  LDC 
Sbjct: 526 NVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDC- 584

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D  V  + +DMY KCG ++           R T  WN ++ G A++G  +E    F+ M
Sbjct: 585 -DSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHM 643

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
            + G +PD VTF+ +LSACS+ GL+ +  + ++ M   +G+ P ++H   +VD LGR G+
Sbjct: 644 VSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGK 703

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA + I  MP   +  + R+LL + R   + + G+  A+ L+ L+PFD SAYVLLSN+
Sbjct: 704 FAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNL 763

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
           +A   +W DV   R  MK   + K P                       A+ I+ K++ +
Sbjct: 764 YATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEI 823

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------- 893
           + +++E GYV DT   L D +EE+KE  L+ HSEKLA AYGL+  P  S I         
Sbjct: 824 LLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVC 883

Query: 894 ------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                       + ++E +  +  RFH  + G C C+D
Sbjct: 884 ADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSD 921



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/688 (21%), Positives = 291/688 (42%), Gaps = 100/688 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G + HA    +  + + ++   L+ +Y   G ++ A+RLF +MP R+++SW +I+ A + 
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G      + E    +R +R+     +   LA ++ LC +     A   V  + +  GL+
Sbjct: 123 NG-----CMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V+ +L+ ++    ++++A+ LFD M+ERD + W  M+  Y+      + F +  D+
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 252 HRSGLCPD----------------------------DESVQCVLGVISDLGKRHEEQVQA 283
               + PD                               + C + +I+ L   +    + 
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 284 YAIKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV-QYDSVTFLVALAA 341
              + L  N +  +V+ WN  +S Y+Q      A+E    +++++    +S+TF  AL A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------MGCV----- 383
            +  + L  G+ IH   L+    + +++GNSL+ MYSK             M C      
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 384 -------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                     G++ +  T+ ++     SL +       +H +  
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           +   ++D +++ +LI +Y   G +  +  +F   +   + +WNA+I   +      +A++
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIK 537

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF     +G +LD   +A  + +   L  L++G Q+H  ++K+G + D  V +  +DMY 
Sbjct: 538 LFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYG 597

Query: 539 KCGAMVDAQSIFNDIPAP---DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           KCG M     +   +P P       W T+ISG    G    A   +  M   G  PD  T
Sbjct: 598 KCGKM---DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVT 654

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDA 647
           F  L+ A S    +++G   + ++        P  G+S        +VD+  + G   +A
Sbjct: 655 FVALLSACSHAGLIDKGMDYYNSMA-------PTFGVSPGIKHCVCIVDLLGRLGKFAEA 707

Query: 648 YILFKQMD-MRNTVLWNAMLVGLAQHGN 674
                +M  + N ++W ++L     H N
Sbjct: 708 EKFIDEMPVLPNDLIWRSLLSSSRTHKN 735



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 235/582 (40%), Gaps = 96/582 (16%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D + G    A ++ S  +    + N+L+TM+     +  A RLFD+M +RD ISWN++++
Sbjct: 160 DEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMIS 219

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y+H      E  ++ F +   +R         TL  L+ +C SS  V     +H   + 
Sbjct: 220 MYSHE-----EVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVS 274

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            GL     +  ALVN+YS  GK+ EA+ LF  M  RDV+ W  M+ +Y ++    E    
Sbjct: 275 SGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALET 334

Query: 248 FVDLHRS--------------GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
              L ++              G C   E++     + + + +R  + V      LL   +
Sbjct: 335 LGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYS 394

Query: 294 NSN----------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
             N                VV  N    GY  + D   A+  F  M  + ++ + +T + 
Sbjct: 395 KCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMIN 454

Query: 338 ALAAVAGTDNLN-LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------- 383
                    +L+  G  +H    ++G  S   + NSLI MY+  G +             
Sbjct: 455 LQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK 514

Query: 384 ------------------------------CGLRTDQFTLASVLRAS---SSLPEGLHLS 410
                                          G + D+F LA  L +S   +SL EG+   
Sbjct: 515 SVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGM--- 571

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            Q+H  ++KN    DS V  A +D+Y + G M        +        WN +I GY   
Sbjct: 572 -QLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARY 630

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFEL 525
               +A + F HM + G++ D +T    + AC    ++ +G   +      + +  G + 
Sbjct: 631 GYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKH 690

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMIS 566
            +C    I+D+  + G   +A+   +++P  P+D+ W +++S
Sbjct: 691 CVC----IVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 38/323 (11%)

Query: 53  SSQWFSILRHAISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S  FS    A S+ + L+ G++ HA IL  S      + N+L+TMYS+C S+    R+F
Sbjct: 347 NSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVF 406

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           + MP  D++S N +   YA       E+V    R+F  +R +    + +T+  L   C S
Sbjct: 407 ESMPCYDVVSCNVLTGGYA-----ALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKS 461

Query: 172 SGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
            G + +    +H Y  + GL+ DE+++ +L+ +Y+  G +  +  +F  +  + V+ W  
Sbjct: 462 LGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNA 521

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLL 289
           ++ A   +G GEE   LF+D   +G   D   +   L   ++L    E  Q+   ++K  
Sbjct: 522 IIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNG 581

Query: 290 LYNNNSNVV-----------------------------LWNKKLSGYLQVGDNHGAIECF 320
           L + +S+VV                              WN  +SGY + G    A + F
Sbjct: 582 L-DCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTF 640

Query: 321 VNMIRSNVQYDSVTFLVALAAVA 343
            +M+    + D VTF+  L+A +
Sbjct: 641 KHMVSVGQKPDYVTFVALLSACS 663


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 247/853 (28%), Positives = 400/853 (46%), Gaps = 134/853 (15%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG------EGNAENV 140
           +R LT  +   Y R  S  Y     +++      +++ +    A  G      + +A  +
Sbjct: 18  NRCLTEKIS--YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMI 75

Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSS-GYVWASETVHGYALKIGLVWDEFVSGA 199
             GFR            +   L  LL++  +S  +V AS       L+  + W++ ++G 
Sbjct: 76  ISGFR-----------PTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING- 123

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
               YSK   + +A   F+ M  RDVV W  ML  Y +NG   +   +FVD+ R G+  D
Sbjct: 124 ----YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179

Query: 260 DESVQCVLGVISDL----------------------------------GKRHEEQVQAYA 285
             +   +L V S L                                  GKR  E     +
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE-----S 234

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
           +++       N V W+  ++G +Q      A++ F  M + N       +   L + A  
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------- 383
             L LG Q+H   LKS F +  IV  + ++MY+K   +                      
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354

Query: 384 ---------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
                                 GL  D+ +L+ V RA + L +GL    QI+  AIK+  
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA-LVKGLSEGLQIYGLAIKSSL 413

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             D  V+ A ID+Y +  ++AEA  +F+     D  +WNA+I  +  +   ++ L LF  
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473

Query: 483 MHTSGERLDEITIATAVKAC--GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
           M  S    DE T  + +KAC  G L     G ++H+  +KSG   +  V   ++DMY KC
Sbjct: 474 MLRSRIEPDEFTFGSILKACTGGSL---GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 530

Query: 541 GAMVDAQSIFNDIPAPDDVA--------------------WTTMISGCVDNGEEDLALSI 580
           G + +A+ I +      +V+                    W ++ISG V   + + A  +
Sbjct: 531 GMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQML 590

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           + +M   G+ PD+FT+A ++   + L +   G+QIHA +IK +  SD ++  +LVDMY+K
Sbjct: 591 FTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSK 650

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG++ D+ ++F++   R+ V WNAM+ G A HG GEE ++LFE M    ++P+ VTFI +
Sbjct: 651 CGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           L AC++ GL+ +  E F++M+  YG++P++ HYS +VD LG++G+ K A ELI  MPFEA
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770

Query: 761 SASMHRALLGACRV-QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
              + R LLG C + + + E  +     L+ L+P DSSAY LLSN++A A  W+ V+  R
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830

Query: 820 GEMKRKNVKKDPA 832
             M+   +KK+P 
Sbjct: 831 RNMRGFKLKKEPG 843


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 213/703 (30%), Positives = 348/703 (49%), Gaps = 91/703 (12%)

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           L GY +      A+  F  M   +V+     F   L       +L  G++IHG+ + SGF
Sbjct: 2   LKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGF 61

Query: 364 YSAVIVGNSLINMYSK----------------MGCVC----------------------- 384
              +     ++NMY+K                   VC                       
Sbjct: 62  SWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLR 121

Query: 385 ----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G R D  T+ S+L A +     L +   +H + ++    +   VSTAL+D+Y + G
Sbjct: 122 MSEEGHRPDSITIVSILPAVAD-TRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           S++ A  +F+  D   + +WN+MI GY+ S ++  A+ +F  M   G +   +T+  A+ 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L  L++GK +H    +   + D+ V + ++ MY KC  +  A  IF ++     V+
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  MI G   NG  + AL+ + +M+   + PD FT   ++ A + L+   Q + IH  +I
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           +     + FV  +LVDMYAKCG I  A  LF  M+ R+ + WNAM+ G   HG G+ +++
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           LF++MK   ++P+ +TF+  LSACS++GLV E    F  M++ YGIEP ++HY  +VD L
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLL 480

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
           GRAGR  +A + I  MP +   +++ A+LGAC++  + + G+  A ++  L P D   +V
Sbjct: 481 GRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHV 540

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFA 837
           LL+NI+A A+ W  V   R  M++  ++K P                       +  I++
Sbjct: 541 LLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYS 600

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
            +E L+  I+  GYVPDT+ +  DVE++ K + L  HSEKLA A+GL++T   + I    
Sbjct: 601 YLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRK 659

Query: 894 -----------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                            ++ +E +  +  RFH  +DG+C C D
Sbjct: 660 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGD 702



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 225/524 (42%), Gaps = 94/524 (17%)

Query: 142 EGFRLFRSLRESITFTSRL---TLAP-------LLKLCLSSGYVWASETVHGYALKIGLV 191
           +G+    SL  +++F SR+   ++ P       LLKLC  +  +   + +HG  +  G  
Sbjct: 3   KGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFS 62

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           W+ F    +VN+Y+K  +I +A  +FD M ERD+V W  M+  YA+NGF +    L + +
Sbjct: 63  WNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRM 122

Query: 252 HRSGLCPDDESVQCVLGVISD--------------LGKRHEEQVQAYAIKLLLYN----- 292
              G  PD  ++  +L  ++D              L    E  V      + +Y+     
Sbjct: 123 SEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSV 182

Query: 293 ----------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                     ++  VV WN  + GY+Q GD  GA+  F  M+   VQ  +VT + AL A 
Sbjct: 183 SIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC 242

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM---------------------- 380
           A   +L  G+ +H    +    S V V NSLI+MYSK                       
Sbjct: 243 ADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWN 302

Query: 381 ---------GCV-------C-----GLRTDQFTLASVLRASS--SLPEGLHLSKQIHVHA 417
                    GCV       C      ++ D FT+ SV+ A +  S+P     +K IH   
Sbjct: 303 AMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQ---AKWIHGLV 359

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           I+     + FV TAL+D+Y + G++  A  LF+  +   + TWNAMI GY        ++
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDM 536
           ELF  M     + ++IT   A+ AC    ++++G        K  G E  +     ++D+
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC-----VDNGEE 574
             + G +  A      +P  P    +  M+  C     VD GE+
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEK 523



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 1/308 (0%)

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           M+ GY  S++   AL  FS M     R         +K CG    LK+GK++H   + SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  +L   +G+++MY KC  + DA ++F+ +P  D V W TMISG   NG   +AL +  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +M   G  PD  T   ++ A +    L  G  +H  +++    S   V  +LVDMY+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           ++  A ++F  MD R  V WN+M+ G  Q G+ E  + +F+ M   GV+P +VT +G L 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           AC+  G + E  +  H + ++  ++ +V   + L+    +  R   A ++  ++  +   
Sbjct: 241 ACADLGDL-ERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 763 SMHRALLG 770
           S +  +LG
Sbjct: 300 SWNAMILG 307



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 34/385 (8%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y    S   +L  F +  H S       +  +L+     SDL  GK  H  ++ S    +
Sbjct: 5   YAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWN 64

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F    ++ MY++C  +  A  +FD+MP+RDL+ WN++++ YA +G            L 
Sbjct: 65  LFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKV-----ALMLV 119

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             + E       +T+  +L     +  +     VHGY L+ G      VS ALV++YSK 
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G +  A+ +FDGM  R VV W  M+  Y ++G  E    +F  +   G+ P + +V   L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 268 GVISDLGKRHEEQ---------------------VQAYA------IKLLLYNN--NSNVV 298
              +DLG     +                     +  Y+      I   ++ N  N  +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            WN  + GY Q G  + A+  F  M   N++ DS T +  + A+A        + IHG  
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV 383
           ++      V V  +L++MY+K G +
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAI 384



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 148/337 (43%), Gaps = 34/337 (10%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           ++L+  L+ S       S    SIL     T  L +G + H  +L +       ++  L+
Sbjct: 114 VALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALV 173

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
            MYS+CGS+  AR +FD M  R ++SWNS++  Y  SG+           +F+ + +   
Sbjct: 174 DMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG-----AMLIFQKMLDEGV 228

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
             + +T+   L  C   G +   + VH    ++ L  D  V  +L+++YSK  ++  A  
Sbjct: 229 QPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAAD 288

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG- 274
           +F  ++ + +V W  M+  YA+NG   E  + F ++    + PD  ++  V+  +++L  
Sbjct: 289 IFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSI 348

Query: 275 KRHEEQVQAYAI----------------------------KLLLYNNNSNVVLWNKKLSG 306
            R  + +    I                            KL    N  +V+ WN  + G
Sbjct: 349 PRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG 408

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           Y   G    ++E F  M +  ++ + +TFL AL+A +
Sbjct: 409 YGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACS 445



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  GK  H  +       D  + N+L++MYS+C  +  A  +F  + ++ L+SWN+++ 
Sbjct: 247 DLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMIL 306

Query: 128 AYAHSGEGNAENVTEGFRLF-----RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
            YA +G      V E    F     R+++   +FT    +  L +L +     W    +H
Sbjct: 307 GYAQNG-----CVNEALNAFCEMQSRNIKPD-SFTMVSVIPALAELSIPRQAKW----IH 356

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
           G  ++  L  + FV  ALV++Y+K G I  A+ LFD M  R V+ W  M+  Y  +G G+
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGK 416

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
               LF ++ +  + P+D +  C L   S  G
Sbjct: 417 TSVELFKEMKKGTIKPNDITFLCALSACSHSG 448


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 191/572 (33%), Positives = 313/572 (54%), Gaps = 40/572 (6%)

Query: 296 NVVLWNKKLSGYLQVG---DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           +VV WN  ++GY Q G    +H  ++ F  M   ++  ++ T      A +   +  +G+
Sbjct: 81  DVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGR 140

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------------CVCGL 386
           Q H   +K   +  + V  SL+ MY K G                           +C L
Sbjct: 141 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFL 200

Query: 387 RTDQ------FTLASVLRASSSLPEGLH--LSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
              +      +   +VL   SSL   ++  L +QIH   +KN  +    +S AL+ +Y +
Sbjct: 201 EEKEKESDSDYVFTAVL---SSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSK 257

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
             S+ EA  +F++    +  TW+AM+ GY  +  S +A++LFS M ++G +  E TI   
Sbjct: 258 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGV 317

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC  +  L +GKQ+H++ +K GFE  L  ++ ++DMY K G + DA+  F+ +   D 
Sbjct: 318 LNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 377

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
             WT++ISG V N + + AL +Y +M+ +G++P++ T A ++KA S L  LE G+Q+H +
Sbjct: 378 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 437

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            IK     +  +G +L  MY KCG++ED  ++F++   ++ V WNAM+ GL+ +G G+E 
Sbjct: 438 TIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 497

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L+LFE+M A G EPD VTF+ ++SACS+ G V   +  FH+M +++G++P+V+HY+ +VD
Sbjct: 498 LELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVD 557

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            L RAG+ KE  E I S   +    + R LL AC+  G+ E G +  EKLM+L   +SS 
Sbjct: 558 VLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESST 617

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           YV L+ I+ A  +  DV      M+   V K+
Sbjct: 618 YVQLAGIYTALGRMRDVERVWKLMRTNGVSKE 649



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/614 (23%), Positives = 258/614 (42%), Gaps = 86/614 (14%)

Query: 38  LLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           + P   ++  +  S +S     L H     +L+ G++ HA+I+ +         N L+  
Sbjct: 1   MYPSTFQTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNF 60

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           Y++CG L  A  +F+ +  +D++SWNS++  Y+ +G  ++ +     +LFR +R      
Sbjct: 61  YAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTV--MQLFREMRAQDILP 118

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI------- 210
           +  TLA + K   S          H   +K+    D +V  +LV +Y K G         
Sbjct: 119 NAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVYY 178

Query: 211 ------------REAK----FLFDGMQERD--VVLWKVM--LRAYAENGFGEEVFHLFVD 250
                       R+ K    FL +  +E D   V   V+  L A    G G ++  + V 
Sbjct: 179 GFWLCYKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITV- 237

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
             ++GL         ++ + S     +E      A K+   + + N + W+  ++GY Q 
Sbjct: 238 --KNGLLGFVALSNALVTMYSKCESLNE------ACKMFDSSGDRNSITWSAMVTGYSQN 289

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G++  AI+ F  M  + ++    T +  L A +    L  G+Q+H   LK GF   +   
Sbjct: 290 GESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFAT 349

Query: 371 NSLINMYSKMGCV-------------------------------------------CGLR 387
            +L++MY+K GC+                                            G+ 
Sbjct: 350 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 409

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            +  T+ASVL+A SSL   L L KQ+H H IK+    +  + +AL  +Y + GS+ +   
Sbjct: 410 PNDPTMASVLKACSSLAT-LELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNL 468

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F      D+ +WNAMI G   +    +ALELF  M   G   D++T    + AC     
Sbjct: 469 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGF 528

Query: 508 LKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTM 564
           +++G   + + M   F LD  V   + ++D+  + G + + +           +  W  +
Sbjct: 529 VERGWS-YFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRIL 587

Query: 565 ISGCVDNGEEDLAL 578
           +S C ++G  +L +
Sbjct: 588 LSACKNHGNCELGV 601



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 167/367 (45%), Gaps = 38/367 (10%)

Query: 6   QANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIS 65
           +A LK  +   Y  +  + KD  R     S+  L   +K     S S   + ++L    +
Sbjct: 167 KAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKE----SDSDYVFTAVLSSLAA 222

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           T  + LG+  H   + +  +    L+N L+TMYS+C SL  A ++FD   DR+ I+W+++
Sbjct: 223 TVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 282

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +  Y+ +GE       E  +LF  +  +    S  T+  +L  C    Y+   + +H + 
Sbjct: 283 VTGYSQNGES-----LEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFL 337

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           LK+G     F + ALV++Y+K G + +A+  FD +QERDV LW  ++  Y +N   EE  
Sbjct: 338 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL 397

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK----------------- 287
            L+  +  +G+ P+D ++  VL   S L      +QV  + IK                 
Sbjct: 398 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 457

Query: 288 -----------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                      +     N +VV WN  +SG    G    A+E F  M+    + D VTF+
Sbjct: 458 TKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFV 517

Query: 337 VALAAVA 343
             ++A +
Sbjct: 518 NIISACS 524



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 3/138 (2%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L  G+ +HA  +++G       ++ +++ Y KCG +  A SIFN I   D V+W ++I+G
Sbjct: 32  LVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITG 91

Query: 568 CVDNG---EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
              NG        + ++ +MR   ++P+ +T A + KA S L +   GRQ HA ++K+  
Sbjct: 92  YSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSS 151

Query: 625 SSDPFVGISLVDMYAKCG 642
             D +V  SLV MY K G
Sbjct: 152 FGDIYVDTSLVGMYCKAG 169



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 3/98 (3%)

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L  GR +HA +I+   S+       LV+ YAKCG +  A+ +F  +  ++ V WN+++ G
Sbjct: 32  LVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITG 91

Query: 669 LAQHG---NGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            +Q+G   +    ++LF +M+A  + P++ T  G+  A
Sbjct: 92  YSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKA 129


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 192/554 (34%), Positives = 299/554 (53%), Gaps = 46/554 (8%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K  H   ++ +   D  +S  LI+ Y + G +  A  +F+      L +WN MI  Y  
Sbjct: 82  AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +AL++F  M   G +  E TI++ + ACG      + K++H  +MK+  +L+L V
Sbjct: 142 NRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYV 201

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +LD+Y KCG + DA  +F  +     V W++M++G V +   + AL +Y + +   +
Sbjct: 202 GTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSL 261

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
             ++FT + ++ A S L AL +G+Q+HA + K    S+ FV  S VDMYAKCG++ ++YI
Sbjct: 262 EQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYI 321

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++  +N  LWN ++ G A+H   +E + LFE M+  G+ P+ VTF  +LS C +TGL
Sbjct: 322 IFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 381

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E    F LMR  YG+ P V HYS +VD LGRAG   EA ELI S+PFE +AS+  +LL
Sbjct: 382 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLL 441

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            +CRV  + E  +  A+KL  LEP ++  +VLLSNI+AA  QW+++  +R  ++  +VKK
Sbjct: 442 ASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 501

Query: 830 -------DPADL----------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
                  D  D                 I   ++ L+  +++ GY P  +  L DVE  +
Sbjct: 502 VRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGK 561

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI--------------------LSNKEPLY---AN 903
           KE  L  HSEKLA  +GL+  P  S +                    ++ +  +    AN
Sbjct: 562 KEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDAN 621

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  DG C C +
Sbjct: 622 RFHHFSDGHCSCGE 635



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 197/410 (48%), Gaps = 35/410 (8%)

Query: 308 LQVGDNHGAI----ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           LQ+   +GA+     C    +R  +Q D     V + A +    + L +Q+    L+   
Sbjct: 70  LQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSL 129

Query: 364 YSAVIVGNSLINMYSKMGCVC------------GLRTDQFTLASVLRASSSLPEGLHLSK 411
            S     N++I +Y++                 G +  +FT++SVL A  +  + L   K
Sbjct: 130 VS----WNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALE-CK 184

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H  ++K     + +V TAL+D+Y + G + +A  +FE+       TW++M+ GY+ S 
Sbjct: 185 KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSK 244

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           N  +AL L+          ++ T+++ + AC  L  L +GKQMHA   KSGF  ++ V+S
Sbjct: 245 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVAS 304

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
             +DMY KCG++ ++  IF+++   +   W T+ISG   +      + ++ +M+  G+ P
Sbjct: 305 SAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 364

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYI 649
           +E TF+ L+        +E+GR+    L++      P V     +VD+  + G + +AY 
Sbjct: 365 NEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 423

Query: 650 LFKQMDMRNTV-LWNAMLVGLAQHGNGE----ETLKLFEDMKAHGVEPDS 694
           L K +    T  +W ++L       N E       KLFE      +EP++
Sbjct: 424 LIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFE------LEPEN 467



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 1/240 (0%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           + K  H   M+   + D+ +S+ +++ Y KCG +  A+ +F+ +     V+W TMI    
Sbjct: 81  EAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 140

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N  E  AL I+ +MR  G    EFT + ++ A        + +++H   +K     + +
Sbjct: 141 RNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLY 200

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           VG +L+D+YAKCG I DA  +F+ M  +++V W++M+ G  Q  N EE L L+   +   
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMS 260

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           +E +  T   V+ ACS    + E  +  H +  K G    V   S  VD   + G  +E+
Sbjct: 261 LEQNQFTLSSVICACSNLAALIEG-KQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRES 319



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 34/330 (10%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           +S +  IL+       ++  K+ H + +      D  L+N L+  YS+CG +  AR++FD
Sbjct: 63  ASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFD 122

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            M +R L+SWN+++  Y  +        +E   +F  +R      S  T++ +L  C ++
Sbjct: 123 GMLERSLVSWNTMIGLYTRN-----RMESEALDIFWEMRNEGFKFSEFTISSVLSACGAN 177

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                 + +H  ++K  L  + +V  AL+++Y+K G I +A  +F+ MQ++  V W  M+
Sbjct: 178 CDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMV 237

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
             Y ++   EE   L+    R  L  +  ++  V+   S+L    E +     I+   + 
Sbjct: 238 AGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFG 297

Query: 293 NN-----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +N                              N+ LWN  +SG+ +       +  F  M
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKM 357

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +  +  + VTF   L+    T  +  G++
Sbjct: 358 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 387



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 122/241 (50%), Gaps = 6/241 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    +  D L  K  H   + +S   + ++   L+ +Y++CG +  A ++F+ M D+
Sbjct: 169 SVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDK 228

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W+S++A Y  S     +N  E   L+R  +      ++ TL+ ++  C +   +  
Sbjct: 229 SSVTWSSMVAGYVQS-----KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 283

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H    K G   + FV+ + V++Y+K G +RE+  +F  +QE+++ LW  ++  +A+
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK 343

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +   +EV  LF  + + G+ P++ +   +L V    G   EE  + + +    Y  + NV
Sbjct: 344 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV-EEGRRFFKLMRTTYGLSPNV 402

Query: 298 V 298
           V
Sbjct: 403 V 403



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/435 (20%), Positives = 173/435 (39%), Gaps = 90/435 (20%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L+LC  +G V  ++  HG  +++ L  D  +S  L+N YSK G +  A+ +FDGM ER 
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISD--------- 272
           +V W  M+  Y  N    E   +F ++   G    + ++  VL   G   D         
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188

Query: 273 LGKRHEEQVQAY-----------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
           L  +    +  Y                 A+++     + + V W+  ++GY+Q  +   
Sbjct: 189 LSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  +    R +++ +  T    + A +    L  G+Q+H    KSGF S V V +S ++
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVD 308

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MY+K    CG   + + + S ++                    KN  + ++ +S      
Sbjct: 309 MYAK----CGSLRESYIIFSEVQE-------------------KNIELWNTIISG----- 340

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           + ++    E   LFE                                M   G   +E+T 
Sbjct: 341 FAKHARPKEVMILFEK-------------------------------MQQDGMHPNEVTF 369

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           ++ +  CG   ++++G++       + G   ++   S ++D+  + G + +A  +   IP
Sbjct: 370 SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 429

Query: 555 -APDDVAWTTMISGC 568
             P    W ++++ C
Sbjct: 430 FEPTASIWGSLLASC 444


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 241/861 (27%), Positives = 391/861 (45%), Gaps = 134/861 (15%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   + +GL  +E +   L+ +Y K   + + + +F  ++ RD   W  ++ AY E+G 
Sbjct: 51  IHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQ 108

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK------------ 287
            +    +F  + + G+  D  +   VL   + LG   +   + A+ ++            
Sbjct: 109 AKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANL 168

Query: 288 ---------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
                          LL      ++V WN  ++   Q GD   A+E F  M    V+   
Sbjct: 169 LLHIYGSCGCVASAMLLFEKMERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPAR 228

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------- 384
           +T ++AL   A    +   Q IH    +SG    ++V  +L + Y+++G +         
Sbjct: 229 ITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDR 285

Query: 385 -----------------------------------GLRTDQFTLASVLRASSSLPEGLHL 409
                                              G+   + TL +     SSL  G   
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFG--- 342

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            + IH  A++     D  +  AL+D+Y R GS  EA +LF+ +   +  +WN MI G   
Sbjct: 343 -RMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK-RIPCNAVSWNTMIAGSSQ 400

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGC----LLMLKQGKQMHAYAMKSGFEL 525
                +A+ELF  M   G      T    ++A          + +G+++H+  +  G+  
Sbjct: 401 KGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD---VAWTTMISGCVDNGEEDLALSIYH 582
           +  + + ++ MY  CGA+ +A + F      D    V+W  +IS    +G    AL  + 
Sbjct: 461 EPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFR 520

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +M L GV P++ T   ++ A +   AL +G  +H +L      S+ FV  +L  MY +CG
Sbjct: 521 RMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCG 580

Query: 643 NIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           ++E A  +F+++ + R+ V++NAM+   +Q+G   E LKLF  M+  G  PD  +F+ VL
Sbjct: 581 SLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVL 640

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SACS+ GL  E +E F  MR+ YGI P  +HY+  VD LGRAG   +A ELI  M  + +
Sbjct: 641 SACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPT 700

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
             + + LLGACR   D + G+     +  L+P D SAYV+LSNI A A +WD+    R E
Sbjct: 701 VLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTE 760

Query: 822 MKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFV 858
           M+ + ++K+                        ++ I+ ++E L   I+E GYVPDT  V
Sbjct: 761 MESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLV 820

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSV--------------------ILSNKE 898
           L  V+E EKER L  HSE+LA A G++S+   +V                     + NKE
Sbjct: 821 LRKVDEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCEDCHNATKFISKIVNKE 880

Query: 899 PLY--ANRFHHLRDGMCPCAD 917
            +    +RFHH  DG C C D
Sbjct: 881 IVVRDTHRFHHFVDGSCSCGD 901



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 172/701 (24%), Positives = 299/701 (42%), Gaps = 92/701 (13%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           S  S ++  +    +LR A     L  G+  HARI+  S   +  L N+L+ +Y +C SL
Sbjct: 21  SSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESL 78

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
                +F ++  RD  SW +I+ AY   G+           +F  +++       +T   
Sbjct: 79  GDVEEVFSRLEVRDEASWTTIITAYTEHGQAK-----RAIGMFHRMQQEGVRCDAVTFLA 133

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +LK C   G +    ++H + ++ GL     ++  L++IY   G +  A  LF+ M ERD
Sbjct: 134 VLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERD 192

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------ 278
           +V W   + A A++G       LF  +   G+ P   ++   L V + + +         
Sbjct: 193 LVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVR 252

Query: 279 ----EQV--------QAYAIKLLLYNNNS--------NVVLWNKKLSGYLQVGDNHGAIE 318
               EQ          AYA    LY            +VV WN  L  Y Q G    A  
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M+   +    VT    + A  G  +L  G+ IHG  L+ G    +++GN+L++MY+
Sbjct: 313 LFARMLHEGISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYT 369

Query: 379 KMGC------------------------------------------VCGLRTDQFTLASV 396
           + G                                           + G+   + T  ++
Sbjct: 370 RCGSPEEARHLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNL 429

Query: 397 LRASSSLPE---GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-- 451
           L A +S PE    +   +++H   +     ++  + TA++ +Y   G++ EA   F+   
Sbjct: 430 LEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGA 489

Query: 452 -KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
            +D  D+ +WNA+I       +  +AL  F  M   G   ++IT    + AC     L +
Sbjct: 490 MEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTE 549

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCV 569
           G+ +H +   SG E +L V++ +  MY +CG++  A+ IF  +    DV  +  MI+   
Sbjct: 550 GEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYS 609

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSS 626
            NG    AL ++ +M+  G  PDE +F  ++ A S     ++G +I  ++ +   +  S 
Sbjct: 610 QNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSE 669

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAML 666
           D +     VD+  + G + DA  L + MD++ TVL W  +L
Sbjct: 670 DHYA--CAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLL 708



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 257/610 (42%), Gaps = 113/610 (18%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L+      DL  G+S HA I+ S       L N L+ +Y  CG +  A  LF+KM 
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM- 189

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +RDL+SWN+ +AA A SG     ++     LF+ ++      +R+TL   L +C +   +
Sbjct: 190 ERDLVSWNAAIAANAQSG-----DLGIALELFQRMQLEGVRPARITLVIALTVCAT---I 241

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
             ++ +H    + GL     VS AL + Y++ G + +AK +FD   ERDVV W  ML AY
Sbjct: 242 RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAY 301

Query: 236 AENGFGEEVFHLFVDLHRSGLCPD-----DESVQC----------------------VLG 268
           A++G   E   LF  +   G+ P      + S  C                      VLG
Sbjct: 302 AQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLG 361

Query: 269 -VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
             + D+  R     +A   + L      N V WN  ++G  Q G    A+E F  M    
Sbjct: 362 NALLDMYTRCGSPEEA---RHLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEG 418

Query: 328 VQYDSVTFLVALAAVAGTDN----LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +     T+L  L AVA        +  G+++H   +  G+ S   +G +++ MY+  G +
Sbjct: 419 MAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAI 478

Query: 384 ----------------------------------------------CGLRTDQFTLASVL 397
                                                          G+  +Q T  +VL
Sbjct: 479 DEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVL 538

Query: 398 RA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KD 453
            A   +++L EG    + +H H   +   ++ FV+TAL  +Y R GS+  A  +FE    
Sbjct: 539 DACAGAAALTEG----EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAV 594

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D+  +NAMI  Y  +  + +AL+LF  M   G R DE +  + + AC    +  +G +
Sbjct: 595 ERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWE 654

Query: 514 M-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISG 567
           +      +Y +    +   C     +D+  + G + DA+ +   +   P  + W T++  
Sbjct: 655 IFRSMRQSYGIAPSEDHYACA----VDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGA 710

Query: 568 C-----VDNG 572
           C     VD G
Sbjct: 711 CRKYRDVDRG 720



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 164/352 (46%), Gaps = 8/352 (2%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           LS+   +HA       +  +   L+ +Y +  S+ + E +F   +  D A+W  +I  Y 
Sbjct: 45  LSQGRRIHARIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYT 104

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
               + +A+ +F  M   G R D +T    +KAC  L  L QG+ +HA+ ++SG +    
Sbjct: 105 EHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSV 164

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           +++ +L +Y  CG +  A  +F  +   D V+W   I+    +G+  +AL ++ +M+L G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEG 223

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V P   T  I +  + C T + Q + IH  + +        V  +L   YA+ G++  A 
Sbjct: 224 VRPARITLVIAL--TVCAT-IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAK 280

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F +   R+ V WNAML   AQHG+  E   LF  M   G+ P  VT +   + CS   
Sbjct: 281 EVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLR 340

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
                    H    + G++ ++   + L+D   R G  +EA  L   +P  A
Sbjct: 341 F----GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNA 388



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 143/273 (52%), Gaps = 8/273 (2%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           ++A G   +L QG+++HA  +  G E +L   + +L +Y+KC ++ D + +F+ +   D+
Sbjct: 36  LRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDE 93

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            +WTT+I+   ++G+   A+ ++H+M+  GV  D  TF  ++KA + L  L QGR IHA 
Sbjct: 94  ASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAW 153

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           +++        +   L+ +Y  CG +  A +LF++M+ R+ V WNA +   AQ G+    
Sbjct: 154 IVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIA 212

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L+LF+ M+  GV P  +T +  L+ C+         +  H +  + G+E  +   + L  
Sbjct: 213 LELFQRMQLEGVRPARITLVIALTVCATI----RQAQAIHFIVRESGLEQTLVVSTALAS 268

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           A  R G   +A E +     E       A+LGA
Sbjct: 269 AYARLGHLYQAKE-VFDRAAERDVVSWNAMLGA 300



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 2/114 (1%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L++A+     L QGR+IHA ++ L    +  +G  L+ +Y KC ++ D   +F ++++R+
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
              W  ++    +HG  +  + +F  M+  GV  D+VTF+ VL AC+  G +S+
Sbjct: 93  EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 231/762 (30%), Positives = 368/762 (48%), Gaps = 114/762 (14%)

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           S  +V AS       L+  + W++ ++G     YSK   + +A   F+ M  RDVV W  
Sbjct: 54  SRDFVSASMVFDKMPLRDVVSWNKMING-----YSKSNDMFKANSFFNMMPVRDVVSWNS 108

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL----------------- 273
           ML  Y +NG   +   +FVD+ R G+  D  +   +L V S L                 
Sbjct: 109 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG 168

Query: 274 -----------------GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
                            GKR  E     ++++       N V W+  ++G +Q      A
Sbjct: 169 CDTDVVAASALLDMYAKGKRFVE-----SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           ++ F  M + N       +   L + A    L LG Q+H   LKS F +  IV  + ++M
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283

Query: 377 YSKMGCV-------------------------------------------CGLRTDQFTL 393
           Y+K   +                                            GL  D+ +L
Sbjct: 284 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           + V RA + L +GL    QI+  AIK+    D  V+ A ID+Y +  ++AEA  +F+   
Sbjct: 344 SGVFRACA-LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 402

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC--GCLLMLKQG 511
             D  +WNA+I  +  +   ++ L LF  M  S    DE T  + +KAC  G L     G
Sbjct: 403 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL---GYG 459

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA----------- 560
            ++H+  +KSG   +  V   ++DMY KCG + +A+ I +      +V+           
Sbjct: 460 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 519

Query: 561 ---------WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
                    W ++ISG V   + + A  ++ +M   G+ PD+FT+A ++   + L +   
Sbjct: 520 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 579

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA +IK +  SD ++  +LVDMY+KCG++ D+ ++F++   R+ V WNAM+ G A 
Sbjct: 580 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 639

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG GEE ++LFE M    ++P+ VTFI +L AC++ GL+ +  E F++M+  YG++P++ 
Sbjct: 640 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP 699

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV-QGDTETGKWVAEKLMA 790
           HYS +VD LG++G+ K A ELI  MPFEA   + R LLG C + + + E  +     L+ 
Sbjct: 700 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 759

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L+P DSSAY LLSN++A A  W+ V+  R  M+   +KK+P 
Sbjct: 760 LDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 801



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 163/655 (24%), Positives = 292/655 (44%), Gaps = 84/655 (12%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+      D  LG   H  ++      D    + L+ MY++    V + R+F  +P+++
Sbjct: 144 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 119 LISWNSILAAYAHSGEGNAEN--VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            +SW++I+A       G  +N  ++   + F+ +++     S+   A +L+ C +   + 
Sbjct: 204 SVSWSAIIA-------GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 256

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +H +ALK     D  V  A +++Y+K   +++A+ LFD  +  +   +  M+  Y+
Sbjct: 257 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 316

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY------------ 284
           +   G +   LF  L  SGL  D+ S+  V    + L K   E +Q Y            
Sbjct: 317 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA-LVKGLSEGLQIYGLAIKSSLSLDV 375

Query: 285 ------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                             A ++       + V WN  ++ + Q G  +  +  FV+M+RS
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            ++ D  TF   L A  G  +L  G +IH + +KSG  S   VG SLI+MYSK    CG+
Sbjct: 436 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK----CGM 490

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                               +  +++IH    +   V+               G+M E E
Sbjct: 491 --------------------IEEAEKIHSRFFQRANVS---------------GTMEELE 515

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +   +      +WN++I GY++   S  A  LF+ M   G   D+ T AT +  C  L 
Sbjct: 516 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 575

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
               GKQ+HA  +K   + D+ + S ++DMY KCG + D++ +F      D V W  MI 
Sbjct: 576 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 635

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G+ + A+ ++ +M L  + P+  TF  +++A + +  +++G + +  ++K D   
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGL 694

Query: 627 DPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEET 678
           DP +    ++VD+  K G ++ A  L ++M    + V+W  +L     H N  E 
Sbjct: 695 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 749



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 241/590 (40%), Gaps = 118/590 (20%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           NL S +L     +QK   ++  S S + S+LR   + S+L LG   HA  L S    D  
Sbjct: 218 NLLSLALKFFKEMQK--VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 275

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           +    + MY++C ++  A+ LFD   + +  S+N+++  Y+    G      +   LF  
Sbjct: 276 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG-----FKALLLFHR 330

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L  S      ++L+ + + C     +     ++G A+K  L  D  V+ A +++Y K   
Sbjct: 331 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 390

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD--------- 260
           + EA  +FD M+ RD V W  ++ A+ +NG G E   LFV + RS + PD+         
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 450

Query: 261 ------------------------ESVQCVL-------GVISDLGKRHEEQVQ----AYA 285
                                    SV C L       G+I +  K H    Q    +  
Sbjct: 451 CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 510

Query: 286 IKLLLYNNNSNV----VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           ++ L   +N  +    V WN  +SGY+    +  A   F  M+   +  D  T+   L  
Sbjct: 511 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 570

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
            A   +  LG+QIH   +K    S V + ++L++MYSK G                    
Sbjct: 571 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG-------------------- 610

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                LH S+ +   +++ D V                                   TWN
Sbjct: 611 ----DLHDSRLMFEKSLRRDFV-----------------------------------TWN 631

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI GY       +A++LF  M     + + +T  + ++AC  + ++ +G + + Y MK 
Sbjct: 632 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKR 690

Query: 522 GFELD--LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            + LD  L   S ++D+  K G +  A  +  ++P   DDV W T++  C
Sbjct: 691 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 740



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 33/196 (16%)

Query: 608 ALEQGRQIHANLI---------KLDC------SSDPFVGISLV----------------D 636
           ALE G+Q HA++I          L+C      +S  FV  S+V                +
Sbjct: 21  ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 80

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
            Y+K  ++  A   F  M +R+ V WN+ML G  Q+G   +++++F DM   G+E D  T
Sbjct: 81  GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 140

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           F  +L  CS+    S   +  H +  + G + +V   S L+D   +  R  E+  +   +
Sbjct: 141 FAIILKVCSFLEDTSLGMQ-IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199

Query: 757 PFEASASMHRALLGAC 772
           P + S S   A++  C
Sbjct: 200 PEKNSVSWS-AIIAGC 214


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 321/612 (52%), Gaps = 64/612 (10%)

Query: 364 YSAVIVGNSLIN-------MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           ++A+I G S  N       MYS M  +  +  D FT   +L+A S L   L + + +H  
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQ-LARVSPDSFTFPHLLKACSGLSH-LQMGRFVHAQ 144

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL-----ATWNAMIFGYILSN 471
             +    AD FV   LI +Y +   +  A  +FE   G  L      +W A++  Y  + 
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE---GLPLPERTIVSWTAIVSAYAQNG 201

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +ALE+FS M     + D + + + + A  CL  LKQG+ +HA  +K G E++  +  
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +  MY KCG +  A+ +F+ + +P+ + W  MISG   NG    A+ ++H+M    V P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D  +    + A + + +LEQ R ++  + + D   D F+  +L+DM+AKCG++E A ++F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +   R+ V+W+AM+VG   HG   E + L+  M+  GV P+ VTF+G+L AC+++G+V 
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E +  F+ M + + I P+ +HY+ ++D LGRAG   +A E+I  MP +   ++  ALL A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           C+     E G++ A++L +++P ++  YV LSN++AAA  WD V   R  MK K + KD 
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                   + I  +VE +  R+KEGG+V + D  L D+ +EE E
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
             L  HSE++A AYGLISTP  + +                     L ++E +    NRF
Sbjct: 621 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 680

Query: 906 HHLRDGMCPCAD 917
           HH +DG+C C D
Sbjct: 681 HHFKDGVCSCGD 692



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 5/342 (1%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQIH   +        F+ T LI      G +  A  +F++     +  WNA+I GY  +
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           N+   AL ++S+M  +    D  T    +KAC  L  L+ G+ +HA   + GF+ D+ V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           +G++ +Y KC  +  A+++F  +P P+   V+WT ++S    NGE   AL I+ QMR   
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           V PD      ++ A +CL  L+QGR IHA+++K+    +P + ISL  MYAKCG +  A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           ILF +M   N +LWNAM+ G A++G   E + +F +M    V PD+++    +SAC+  G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 709 LVSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            + +A   + ++ R  Y    +V   S L+D   + G  + A
Sbjct: 338 SLEQARSMYEYVGRSDY--RDDVFISSALIDMFAKCGSVEGA 377



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 36/346 (10%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HAR+L        FL   L+   S  G + +AR++FD +P   +  WN+I+  Y+ +
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
                 +  +   ++ +++ +       T   LLK C    ++     VH    ++G   
Sbjct: 98  -----NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           D FV   L+ +Y+K  ++  A+ +F+G+   ER +V W  ++ AYA+NG   E   +F  
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-------LLYNNNS------- 295
           + +  + PD  ++  VL   + L   +    + A  +K+       LL + N+       
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272

Query: 296 --------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         N++LWN  +SGY + G    AI+ F  MI  +V+ D+++   A++A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
            A   +L   + ++    +S +   V + ++LI+M++K G V G R
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 2/196 (1%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           Q KQ+HA  +  G +    + + ++      G +  A+ +F+D+P P    W  +I G  
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N     AL +Y  M+L+ V PD FTF  L+KA S L+ L+ GR +HA + +L   +D F
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           V   L+ +YAKC  +  A  +F+ + +  R  V W A++   AQ+G   E L++F  M+ 
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 688 HGVEPDSVTFIGVLSA 703
             V+PD V  + VL+A
Sbjct: 216 MDVKPDWVALVSVLNA 231



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 36/314 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD--KMPD 116
           +L+     S L +G+  HA++       D F+ N L+ +Y++C  L  AR +F+   +P+
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R ++SW +I++AYA +GE       E   +F  +R+       + L  +L        + 
Sbjct: 185 RTIVSWTAIVSAYAQNGEP-----MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
              ++H   +K+GL  +  +  +L  +Y+K G++  AK LFD M+  +++LW  M+  YA
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----------------RHEEQ 280
           +NG+  E   +F ++    + PD  S+   +   + +G                 R +  
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359

Query: 281 VQAYAIKL-----------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           + +  I +           L+++   + +VV+W+  + GY   G    AI  +  M R  
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419

Query: 328 VQYDSVTFLVALAA 341
           V  + VTFL  L A
Sbjct: 420 VHPNDVTFLGLLMA 433



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       DL  G+S HA ++      +  L  +L TMY++CG +  A+ LFDKM   
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +LI WN++++ YA +G        E   +F  +         +++   +  C   G +  
Sbjct: 287 NLILWNAMISGYAKNGYAR-----EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + +++ Y  +     D F+S AL+++++K G +  A+ +FD   +RDVV+W  M+  Y  
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401

Query: 238 NGFGEEVFHLFVDLHRSGLCPDD 260
           +G   E   L+  + R G+ P+D
Sbjct: 402 HGRAREAISLYRAMERGGVHPND 424


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 221/730 (30%), Positives = 345/730 (47%), Gaps = 122/730 (16%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA KL       N+  WN  +  Y +V D   A   F  M++  V  D+ TF  AL    
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCG 186

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM----GCVC--------------- 384
              + + G+Q+H   +  GF     VGN+LI+MY+K      C+                
Sbjct: 187 ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNS 246

Query: 385 --------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                     G++ DQFT  ++L   ++     +  +QIH H I
Sbjct: 247 IISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCAN-QRNDNQGRQIHAHLI 305

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           + +   +  V T L+ +Y   G +  A+ +F      +  +WN+MI GY  +  + +AL 
Sbjct: 306 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 365

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M  +G + D  ++++ + +C  L   ++G+++H + +++  E +  +   ++DMY 
Sbjct: 366 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYA 425

Query: 539 KCGAMVDAQSIFNDIPAPD--DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           KCG+M  A  +++     D     W ++++G  + G +  + + + +M  S +  D  T 
Sbjct: 426 KCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTM 485

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             +V                 NL+ L+         +LVDMY+KCG I  A  +F  M+ 
Sbjct: 486 VTIV-----------------NLLVLE--------TALVDMYSKCGAITKARTVFDNMNG 520

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           +N V WNAM+ G ++HG  +E L L+E+M   G+ P+ VTF+ +LSACS+TGLV E    
Sbjct: 521 KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI 580

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F  M+E Y IE + EHY+ +VD LGRAGR ++A E +  MP E   S   ALLGACRV  
Sbjct: 581 FTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHK 640

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---- 832
           D + G+  A++L  L+P +   YV++SNI+AAA +W +V   R  MK K VKKDP     
Sbjct: 641 DMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 700

Query: 833 -------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
                              + I+  +  L  + K  GY+PDT F+L +V++ ++E    Y
Sbjct: 701 EINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEY 760

Query: 874 ---HSEKLARAYGLISTPPSSVILSNKE-----------------------PLYANRFHH 907
              HSE+LA + GLIS P  S I   K                            NRFHH
Sbjct: 761 LLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHH 820

Query: 908 LRDGMCPCAD 917
             +G C C D
Sbjct: 821 FENGKCSCGD 830



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/580 (22%), Positives = 266/580 (45%), Gaps = 70/580 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG---SLVYARRLFDKM 114
           S+++  I ++    GKS H +++++   PD +L   ++ +Y+R G    L YAR+LF++M
Sbjct: 76  SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P+R+L +WN+++ AYA       ++  E + +F  + +        T A  L++C +   
Sbjct: 136 PERNLTAWNTMILAYAR-----VDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRS 190

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
               + VH   +  G   D FV  AL+++Y+K         +FD M ER+ V W  ++ A
Sbjct: 191 RDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISA 250

Query: 235 YAENGFGEEVFHLFVDLHRS--GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
            A+ G   +   LF+ +  S  G+ PD  +   +L + ++  +R++ Q +     L+  N
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCAN--QRNDNQGRQIHAHLIRAN 308

Query: 293 NNSNVVL-------------------------------WNKKLSGYLQVGDNHGAIECFV 321
              N+++                               WN  + GY Q G+   A+  F 
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 368

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M  + ++ D  +    L++     +   G+++H   +++      I+   L++MY+K G
Sbjct: 369 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCG 428

Query: 382 CV--------CGLRTDQFT--LASVLRASSSLPEGLH----------LSKQIHVHAIKND 421
            +          ++ D+ T    S+L   ++  +GL           L   I    +   
Sbjct: 429 SMDYAWKVYDQTIKKDRNTALWNSILAGYAN--KGLKKESFNHFLEMLESDIEYDVLTMV 486

Query: 422 TVADSFV-STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
           T+ +  V  TAL+D+Y + G++ +A  +F+N +G ++ +WNAMI GY     S +AL L+
Sbjct: 487 TIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILY 546

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYV 538
             M   G   +E+T    + AC    ++++G ++   +M+  + ++      + ++D+  
Sbjct: 547 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFT-SMQEDYNIEAKAEHYTCMVDLLG 605

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           + G + DA+     +P  P+   W  ++  C  + + D+ 
Sbjct: 606 RAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMG 645


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 222/673 (32%), Positives = 330/673 (49%), Gaps = 115/673 (17%)

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           D+     A+ + A    L+ GQQ+H     SGF +  IV +SL +MY        L+ D+
Sbjct: 103 DAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMY--------LKCDR 154

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF- 449
              A  L     +P+                   D  V +A+I  Y R G + EA+ LF 
Sbjct: 155 ILDARKL--FDRMPD------------------RDVVVWSAMIAGYSRLGLVEEAKELFG 194

Query: 450 ENKDGF---DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
           E + G    +L +WN M+ G+  +    +A+ +F  M   G   D  T++  + A GCL 
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-------- 558
            +  G Q+H Y +K G   D  V S +LDMY KCG + +   +F+++   +         
Sbjct: 255 DVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLT 314

Query: 559 ---------------------------VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
                                      V WT++I+ C  NG++  AL ++  M+  GV P
Sbjct: 315 GLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEP 374

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  T   L+ A   ++AL  G++IH   ++     D +VG +L+DMYAKCG I+ A   F
Sbjct: 375 NAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCF 434

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   N V WNA++ G A HG  +ET+++F  M   G +PD VTF  VLSAC+  GL  
Sbjct: 435 DKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTE 494

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E +  ++ M E++GIEP++EHY+ LV  L R G+ +EA  +I  MPFE  A +  ALL +
Sbjct: 495 EGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSS 554

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CRV  +   G+  AEKL  LEP +   Y+LLSNI+A+   WD+    R  MK K ++K+P
Sbjct: 555 CRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNP 614

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                     I  K++ L  ++K+ GY+P T+FVL DVEE++KE
Sbjct: 615 GYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKE 674

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY---ANR 904
           + L  HSEKLA   GL++T P   +                     L  +E +Y    NR
Sbjct: 675 QILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGRE-IYVRDTNR 733

Query: 905 FHHLRDGMCPCAD 917
           FHH +DG+C C D
Sbjct: 734 FHHFKDGVCSCGD 746



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 156/620 (25%), Positives = 272/620 (43%), Gaps = 81/620 (13%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR---RLFDKMPDRDLIS 121
           ST+ L   +  HA IL  +   D  LT +L++ Y+   SL   +    L   +P   L S
Sbjct: 12  STASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFS 71

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           ++S++ A+A S   +  +V   F     LR          L   +K C S   +   + +
Sbjct: 72  FSSLIHAFARSH--HFPHVLTTFSHLHPLR---LIPDAFLLPSAIKSCASLRALDPGQQL 126

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H +A   G + D  V+ +L ++Y K  +I +A+ LFD M +RDVV+W  M+  Y+  G  
Sbjct: 127 HAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLV 186

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWN 301
           EE   LF ++   G+ P                                     N+V WN
Sbjct: 187 EEAKELFGEMRSGGVEP-------------------------------------NLVSWN 209

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             L+G+   G    A+  F  M+      D  T    L AV   +++ +G Q+HG  +K 
Sbjct: 210 GMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQ 269

Query: 362 GFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
           G  S   V +++++MY K GCV                   +       +++ + ++   
Sbjct: 270 GLGSDKFVVSAMLDMYGKCGCV-----------------KEMSRVFDEVEEMEIGSL--- 309

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLF----ENKDGFDLATWNAMIFGYILSNNSHKAL 477
                    A +    RNG +  A  +F    + K   ++ TW ++I     +    +AL
Sbjct: 310 --------NAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           ELF  M   G   + +TI + + ACG +  L  GK++H ++++ G   D+ V S ++DMY
Sbjct: 362 ELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMY 421

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG +  A+  F+ + A + V+W  ++ G   +G+    + ++H M  SG  PD  TF 
Sbjct: 422 AKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT 481

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A +     E+G + + N +  +   +P +     LV + ++ G +E+AY + K+M 
Sbjct: 482 CVLSACAQNGLTEEGWRCY-NSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMP 540

Query: 656 MR-NTVLWNAMLVGLAQHGN 674
              +  +W A+L     H N
Sbjct: 541 FEPDACVWGALLSSCRVHNN 560



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 185/379 (48%), Gaps = 39/379 (10%)

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY---LFENKDGFDL 457
           SS    L  ++Q H   ++ +  +D+ ++T+L+  Y    S++  +    L  +     L
Sbjct: 10  SSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTL 69

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +++++I  +  S++    L  FSH+H      D   + +A+K+C  L  L  G+Q+HA+
Sbjct: 70  FSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF 129

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP----------------------- 554
           A  SGF  D  V+S +  MY+KC  ++DA+ +F+ +P                       
Sbjct: 130 AAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEA 189

Query: 555 ------------APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
                        P+ V+W  M++G  +NG  D A+ ++  M + G  PD  T + ++ A
Sbjct: 190 KELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPA 249

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
             CL  +  G Q+H  +IK    SD FV  +++DMY KCG +++   +F +++       
Sbjct: 250 VGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSL 309

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NA L GL+++G  +  L++F   K   +E + VT+  ++++CS  G   EA E F  M +
Sbjct: 310 NAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-Q 368

Query: 723 KYGIEPEVEHYSFLVDALG 741
            YG+EP       L+ A G
Sbjct: 369 AYGVEPNAVTIPSLIPACG 387



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 154/356 (43%), Gaps = 71/356 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S ++   S   L  G+  HA    S  + D  + ++L  MY +C  ++ AR+LFD+MPDR
Sbjct: 109 SAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDR 168

Query: 118 DLISWNSILAAYAH------------------------------SGEGNAENVTEGFRLF 147
           D++ W++++A Y+                               +G GN     E   +F
Sbjct: 169 DVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMF 228

Query: 148 RSLRESITFTSRLTLAPLLKL--CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           R +     +    T++ +L    CL    V A   VHGY +K GL  D+FV  A++++Y 
Sbjct: 229 RMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQ--VHGYVIKQGLGSDKFVVSAMLDMYG 286

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G ++E   +FD ++E ++      L   + NG  +    +F                 
Sbjct: 287 KCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVF----------------- 329

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                    K  +++++             NVV W   ++   Q G +  A+E F +M  
Sbjct: 330 --------NKFKDQKMEL------------NVVTWTSIIASCSQNGKDLEALELFRDMQA 369

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             V+ ++VT    + A      L  G++IH  +L+ G +  V VG++LI+MY+K G
Sbjct: 370 YGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCG 425


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 213/639 (33%), Positives = 314/639 (49%), Gaps = 92/639 (14%)

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
           H A+  F  M+   +  D+     A+ A AG   L   +Q+HG    SGF S   V +SL
Sbjct: 96  HHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSL 155

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TAL 432
           ++MY K    C    D                          H + +       VS +AL
Sbjct: 156 VHMYIK----CNQIRD-------------------------AHRVFDRMFEPDVVSWSAL 186

Query: 433 IDVYCRNGSMAEAEYLF-ENKDGF---DLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +  Y R G + EA+ LF E  D     +L +WN MI G+  S    +A+ +F  MH  G 
Sbjct: 187 VAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGF 246

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D  TI++ + A G L  L  G  +H Y +K G   D CVSS ++DMY KC    +   
Sbjct: 247 EPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQ 306

Query: 549 IFNDIPAPDD-----------------------------------VAWTTMISGCVDNGE 573
           +F+ +   D                                    V+WT+MI+ C  NG 
Sbjct: 307 VFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR 366

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
           +  AL ++ +M+++GV P+  T   L+ A   + AL  G+  H   ++   S+D +VG +
Sbjct: 367 DMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSA 426

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+DMYAKCG I+ + I F  +  +N V WNA++ G A HG  +E +++F+ M+  G +PD
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPD 486

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
            ++F  VLSACS +GL  E    F+ M  KYGIE  VEHY+ +V  L RAG+ ++A  +I
Sbjct: 487 IISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI 546

Query: 754 LSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWD 813
             MP    A +  ALL +CRV  +   G+  AEKL  LEP +   Y+LLSNI+A+   W+
Sbjct: 547 RRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWN 606

Query: 814 DVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGG 850
           +V   R  MK K ++K+P                          I   ++ L   +K+ G
Sbjct: 607 EVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLG 666

Query: 851 YVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
           Y P+ +FVL DVEE++KE+ L  HSEKLA  +GL++TPP
Sbjct: 667 YFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPP 705



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 269/638 (42%), Gaps = 98/638 (15%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           +T+ L   +  HA IL +    D  L   L++ Y+       A  + D +P+ ++ S+++
Sbjct: 25  TTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFST 84

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++ A++   + +    T    L R L           L   +K C     +  +  VHG 
Sbjct: 85  LIYAFSKFHQFHHALSTFSQMLTRGL-----MPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A   G   D FV  +LV++Y K  +IR+A  +FD M E DVV W  ++ AYA  G  +E 
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL 304
             LF ++  SG+ P                                     N++ WN  +
Sbjct: 200 KRLFSEMGDSGVQP-------------------------------------NLISWNGMI 222

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +G+   G    A+  F++M     + D  T    L AV   ++L +G  IHG  +K G  
Sbjct: 223 AGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLV 282

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
           S   V ++LI+MY K  C   +             S    +  H+               
Sbjct: 283 SDKCVSSALIDMYGKCSCTSEM-------------SQVFDQMDHM--------------- 314

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFEN-KDG---FDLATWNAMIFGYILSNNSHKALELF 480
           D     A I    RNG +  +  LF   KD     ++ +W +MI     +    +ALELF
Sbjct: 315 DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELF 374

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M  +G + + +TI   + ACG +  L  GK  H ++++ G   D+ V S ++DMY KC
Sbjct: 375 REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G +  ++  F+ IP  + V W  +I+G   +G+   A+ I+  M+ SG  PD  +F  ++
Sbjct: 435 GRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVL 494

Query: 601 KASSCLTALEQGRQ----------IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            A S     E+G            I A +    C         +V + ++ G +E AY +
Sbjct: 495 SACSQSGLTEEGSYYFNSMSSKYGIEARVEHYAC---------MVTLLSRAGKLEQAYAM 545

Query: 651 FKQMDMR-NTVLWNAMLVGLAQHGN---GE-ETLKLFE 683
            ++M +  +  +W A+L     H N   GE    KLFE
Sbjct: 546 IRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE 583



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 181/382 (47%), Gaps = 36/382 (9%)

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           ++L   +S    L  ++Q H H +K     D+ ++T L+  Y  N   A+A  + +    
Sbjct: 17  TILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE 76

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            ++ +++ +I+ +   +  H AL  FS M T G   D   + +AVKAC  L  LK  +Q+
Sbjct: 77  PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV 136

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS-----GCV 569
           H  A  SGF+ D  V S ++ MY+KC  + DA  +F+ +  PD V+W+ +++     GCV
Sbjct: 137 HGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCV 196

Query: 570 D------------------------------NGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           D                              +G    A+ ++  M L G  PD  T + +
Sbjct: 197 DEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSV 256

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A   L  L  G  IH  +IK    SD  V  +L+DMY KC    +   +F QMD  + 
Sbjct: 257 LPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV 316

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
              NA + GL+++G  E +L+LF  +K  G+E + V++  +++ CS  G   EA E F  
Sbjct: 317 GSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFRE 376

Query: 720 MREKYGIEPEVEHYSFLVDALG 741
           M +  G++P       L+ A G
Sbjct: 377 M-QIAGVKPNSVTIPCLLPACG 397



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 40/256 (15%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC---------------- 101
           S+L       DL++G   H  ++    + D+ +++ L+ MY +C                
Sbjct: 255 SVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM 314

Query: 102 ---------------GSLVYARRLFDKMPDR----DLISWNSILAAYAHSGEGNAENVTE 142
                          G +  + RLF ++ D+    +++SW S++A  + +G        E
Sbjct: 315 DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD-----ME 369

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
              LFR ++ +    + +T+  LL  C +   +   +  H ++L+ G+  D +V  AL++
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y+K G+I+ ++  FDG+  +++V W  ++  YA +G  +E   +F  + RSG  PD  S
Sbjct: 430 MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIIS 489

Query: 263 VQCVLGVISDLGKRHE 278
             CVL   S  G   E
Sbjct: 490 FTCVLSACSQSGLTEE 505



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 30/195 (15%)

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D     IL   +S   +L Q RQ HA+++K    +D  +   L+  YA      DA ++ 
Sbjct: 12  DSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVL 71

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC------- 704
             +   N   ++ ++   ++       L  F  M   G+ PD+      + AC       
Sbjct: 72  DLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131

Query: 705 ---------SYTGLVSEAYENFHL---------MREKYGI-----EPEVEHYSFLVDALG 741
                    S +G  S+++    L         +R+ + +     EP+V  +S LV A  
Sbjct: 132 PARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191

Query: 742 RAGRTKEAGELILSM 756
           R G   EA  L   M
Sbjct: 192 RQGCVDEAKRLFSEM 206


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 221/681 (32%), Positives = 337/681 (49%), Gaps = 92/681 (13%)

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------- 379
           Q ++ TF   L A +   +L   + +H    ++G ++ + V  +L+++Y+K         
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAAT 185

Query: 380 -----------------------------MGCVCGLRTDQFTLASVLRASSSLPE---GL 407
                                        + C+  ++ D    AS L A   L      L
Sbjct: 186 VFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGAL 245

Query: 408 HLSKQIHVHAIKNDTVADS----FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
              + +H ++++  ++ D      V TAL+D+Y + G +  A  +FE     +  TW+A+
Sbjct: 246 SQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSAL 305

Query: 464 IFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           + G++L     +A  LF  M   G   L   ++A+A++AC  L  L  GKQ+HA   KSG
Sbjct: 306 VGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSG 365

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
              DL   + +L MY K G +  A ++F+ +   D V+++ ++SG V NG+ D A  ++ 
Sbjct: 366 LHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFR 425

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +M+   V PD  T   L+ A S L AL+ G+  H ++I    +S+  +  +L+DMYAKCG
Sbjct: 426 KMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCG 485

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            I+ +  +F  M  R+ V WN M+ G   HG G+E   LF DMK    EPD VTFI ++S
Sbjct: 486 RIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLIS 545

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           ACS++GLV+E    FH+M  KYGI P +EHY  +VD L R G   EA + I  MP +A  
Sbjct: 546 ACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADV 605

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
            +  ALLGACRV  + + GK V+  +  L P  +  +VLLSNIF+AA ++D+    R   
Sbjct: 606 RVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 665

Query: 823 KRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
           K +  KK P                       +  I+ +++ ++  I + GY  DT FVL
Sbjct: 666 KEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVL 725

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY------------------ 901
            DVEEEEKE+AL YHSEKLA A+G+++      I   K                      
Sbjct: 726 QDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRA 785

Query: 902 -----ANRFHHLRDGMCPCAD 917
                ANRFHH ++G C C D
Sbjct: 786 IIVRDANRFHHFKNGQCSCGD 806



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 233/559 (41%), Gaps = 86/559 (15%)

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG L  AR LFD++P   +  +N+++ AY+  G   A  +    R  R  + +       
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPN-----NY 130

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +LK C +   + ++  VH +A + GL  D FVS ALV++Y+K    R A  +F  M
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-E 279
             RDVV W  ML  YA +G   +     + L +    P+  ++  +L +++  G   +  
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGR 249

Query: 280 QVQAYAIKL-------------------------LLYNNN-------SNVVLWNKKLSGY 307
            V AY+++                          L+Y +         N V W+  + G+
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGF 309

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLV-ALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           +  G    A   F +M+   + + S T +  AL A A   +L LG+Q+H    KSG ++ 
Sbjct: 310 VLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTD 369

Query: 367 VIVGNSLINMYSKMGCV------------------------------------------- 383
           +  GNSL++MY+K G +                                           
Sbjct: 370 LTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQA 429

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           C ++ D  T+ S++ A S L   L   K  H   I     +++ +  ALID+Y + G + 
Sbjct: 430 CNVQPDVATMVSLIPACSHL-AALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRID 488

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            +  +F+     D+ +WN MI GY +     +A  LF  M       D++T    + AC 
Sbjct: 489 LSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACS 548

Query: 504 CLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AW 561
              ++ +GK+  H  A K G    +    G++D+  + G + +A      +P   DV  W
Sbjct: 549 HSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVW 608

Query: 562 TTMISGCVDNGEEDLALSI 580
             ++  C  +   DL   +
Sbjct: 609 GALLGACRVHKNIDLGKQV 627



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 167/358 (46%), Gaps = 12/358 (3%)

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G ++ A +LF+      +  +NA+I  Y L   +       S       + +  T    +
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           KAC  LL L+  + +H +A ++G   DL VS+ ++D+Y KC +   A ++F  +PA D V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           AW  M++G   +G+    ++    M+     P+  T   L+   +   AL QGR +HA  
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255

Query: 620 IKL----DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           ++     D      VG +L+DMYAKCG++  A  +F+ M +RN V W+A++ G    G  
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315

Query: 676 EETLKLFEDMKAHG---VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
            E   LF+DM A G   + P SV     L AC+    +    +  H +  K G+  ++  
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLG-KQLHALLAKSGLHTDLTA 372

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
            + L+    +AG   +A  L   M  + + S + AL+      G  +    V  K+ A
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVS-YSALVSGYVQNGKADEAFRVFRKMQA 429



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 125/246 (50%), Gaps = 8/246 (3%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R L +FSL      Q   F S +S +   S LR   + SDL LGK  HA +  S    D 
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVA---SALRACANLSDLCLGKQLHALLAKSGLHTDL 370

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
              N+L++MY++ G +  A  LFD+M  +D +S++++++ Y  +G+ +     E FR+FR
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKAD-----EAFRVFR 425

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            ++         T+  L+  C     +   +  HG  +  G+  +  +  AL+++Y+K G
Sbjct: 426 KMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCG 485

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           +I  ++ +FD M  RD+V W  M+  Y  +G G+E   LF+D+      PDD +  C++ 
Sbjct: 486 RIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLIS 545

Query: 269 VISDLG 274
             S  G
Sbjct: 546 ACSHSG 551



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 7/176 (3%)

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +  A+ +F+ IPAP    +  +I      G            R     P+ +TF  +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           +KA S L  L   R +H +  +    +D FV  +LVD+YAKC +   A  +F++M  R+ 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 660 VLWNAMLVGLAQHGNGEET---LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           V WNAML G A HG   +T   L L +D  A    P++ T + +L   +  G +S+
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA----PNASTLVALLPLLAQHGALSQ 247


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 224/721 (31%), Positives = 351/721 (48%), Gaps = 95/721 (13%)

Query: 290 LYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTD 346
           L+N  S  ++ L+N  + G+   G    +I  + ++  ++N++ D+ T+  A++A +  +
Sbjct: 68  LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLE 127

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
           +  +G  +H  ++  G  S + VG++++++Y K                           
Sbjct: 128 DERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMIS 187

Query: 384 --------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                                GL  D  TLA+VL A + L E   L   I   A K    
Sbjct: 188 GFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE-YRLGMGIQCLASKKGLH 246

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           +D +V T LI +Y + G   +   LF+  D  DL ++NAMI GY  ++ +  A+ LF  +
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL 306

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             SG+R++  T+   +        L+  + +   ++K G  L   VS+ +  +Y +   +
Sbjct: 307 LASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEV 366

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A+ +F++ P     +W  MISG   NG  D A+S++ +M +  + P+  T   ++ A 
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSAC 425

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + L AL  G+ +H  +      S+ +V  +LVDMYAKCG+I +A  LF  M  +N V WN
Sbjct: 426 AQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWN 485

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           AM+ G   HG+G+E LKLF +M   G+ P  VTF+ +L ACS++GLVSE  E FH M   
Sbjct: 486 AMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANN 545

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           YG +P  EHY+ +VD LGRAG+   A E I  MP E   ++  ALLGAC +  +TE    
Sbjct: 546 YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANV 605

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------ 831
            +++L  L+P +   YVLLSNI++    +    S R  +K++ + K P            
Sbjct: 606 ASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQY 665

Query: 832 -----------ADLIFAKVEGLIKRIKEGGYVPDT-DFVLLDVEEEEKERALYYHSEKLA 879
                      A  IF  +E L  +++E GY  +T    L DVE+EEKE  +  HSEKLA
Sbjct: 666 VFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLA 725

Query: 880 RAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
            A+GLIST P + I   K                           ANRFHH ++G+C C 
Sbjct: 726 IAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCG 785

Query: 917 D 917
           D
Sbjct: 786 D 786



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 284/616 (46%), Gaps = 65/616 (10%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRL 160
           G++ + R+LF+K+   DL  +N ++  ++ +G   +        L+  LR+         
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSS-----IFLYTHLRKKTNLRPDNF 114

Query: 161 TLAPLLKLCLSSGYVWASETV----HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T A      +S+      E V    H +++  G+  + FV  A+V++Y KF +   A+ +
Sbjct: 115 TYA----FAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKV 170

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK- 275
           FD M ERD VLW  M+  ++ N + E+   +FVD+   GL  D  ++  VL  +++L + 
Sbjct: 171 FDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEY 230

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           R    +Q  A K  L+   S+V +    +S Y + G +     C     +  + +D +  
Sbjct: 231 RLGMGIQCLASKKGLH---SDVYVLTGLISLYSKCGKS-----C-----KGRILFDQID- 276

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
                     D ++    I G T      SAV +   L+          G R +  TL  
Sbjct: 277 --------QPDLISYNAMISGYTFNHETESAVTLFRELL--------ASGQRVNSSTLVG 320

Query: 396 VLRASSSLP-EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           ++     LP   L LS+ I   ++K   +    VSTAL  VYCR   +  A  LF+    
Sbjct: 321 LIPV--YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPE 378

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
             LA+WNAMI GY  +  + +A+ LF  M       + +T+ + + AC  L  L  GK +
Sbjct: 379 KSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSP-NPVTVTSILSACAQLGALSIGKWV 437

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           H        E ++ VS+ ++DMY KCG++V+A+ +F+ +   + V W  MI+G   +G  
Sbjct: 438 HGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHG 497

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH---ANLIKLDCSSDPFVG 631
             AL ++++M  SG+ P   TF  ++ A S    + +G +I    AN       S+ +  
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA- 556

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE----ETLKLFEDMK 686
             +VD+  + G + +A    ++M +     +W A+L     H N E     + +LF+   
Sbjct: 557 -CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQ--- 612

Query: 687 AHGVEPDSVTFIGVLS 702
              ++P++V +  +LS
Sbjct: 613 ---LDPENVGYYVLLS 625



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 160/375 (42%), Gaps = 41/375 (10%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           + S F++++Y     F  S+  F+       S  S+   ++L       +  LG      
Sbjct: 185 MISGFSRNSY-----FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
                   D ++   L+++YS+CG     R LFD++   DLIS+N++++ Y  + E  + 
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES- 298

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
                  LFR L  S    +  TL  L+ + L   ++  S  +   +LKIG++    VS 
Sbjct: 299 ----AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVST 354

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL  +Y +  +++ A+ LFD   E+ +  W  M+  Y +NG  +    LF ++    L P
Sbjct: 355 ALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSP 413

Query: 259 DDESVQCVLGVISDLG--------------KRHEEQVQAYAIKLLLYNN----------- 293
           +  +V  +L   + LG              +R E  V      + +Y             
Sbjct: 414 NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF 473

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + NVV WN  ++GY   G    A++ F  M++S +    VTFL  L A + +  ++
Sbjct: 474 DLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVS 533

Query: 350 LGQQI-HGTTLKSGF 363
            G +I H      GF
Sbjct: 534 EGNEIFHSMANNYGF 548


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 226/756 (29%), Positives = 366/756 (48%), Gaps = 89/756 (11%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA------LVNIYSKFGKIREAKF 215
           L  LL+ C++  ++     +H  A+  GL+ D    G       LV +Y    + R+A  
Sbjct: 39  LLALLRGCVAPSHLPLGLRIHARAVTSGLL-DAAGPGPAALQTRLVGMYVLARRFRDAVA 97

Query: 216 LFDGMQERDV---VLWKVMLRAYAENGFGEEVFHLFVDL--HRSGLCPDDESVQCVLGVI 270
           +F  +        + W  ++R +   G        +V +  H S   PD  ++  V+   
Sbjct: 98  VFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSC 157

Query: 271 SDLGKRH---------------------EEQVQAYAIKLLLYN--------NNSNVVLWN 301
           + LG  H                        ++ YA   LL          +  + VLWN
Sbjct: 158 AALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWN 217

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             + GY++ GD   A+  F  M  S    +  T    L+  A   +L  G Q+H   +K 
Sbjct: 218 VMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKY 277

Query: 362 GFYSAVIVGNSLINMYSKM--------------------------GCV------------ 383
           G    V V N+L++MY+K                           GCV            
Sbjct: 278 GLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLF 337

Query: 384 -----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY-- 436
                 GL+ D  TLAS+L A + L  G    K+IH + ++N    D F+ +AL+D+Y  
Sbjct: 338 CDMQKSGLQPDSVTLASLLPALTEL-NGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFK 396

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
           CR+  MA+   +F+     D+   + MI GY+L+  S  A+++F ++   G + + + +A
Sbjct: 397 CRDVRMAQN--VFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVA 454

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + + AC  +  ++ G+++H Y +K+ +E    V S ++DMY KCG +  +  +F+ + A 
Sbjct: 455 STLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK 514

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D+V W +MIS    NGE + AL ++ QM + GV  +  T + ++ A + L A+  G++IH
Sbjct: 515 DEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIH 574

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             +IK    +D F   +L+DMY KCGN+E A  +F+ M  +N V WN+++     HG  +
Sbjct: 575 GIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVK 634

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E++ L   M+  G + D VTF+ ++SAC++ G V E    F  M E+Y IEP+VEH S +
Sbjct: 635 ESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCM 694

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD   RAG+  +A + I  MPF+  A +  ALL ACRV  + E  +  +++L  L+P + 
Sbjct: 695 VDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNC 754

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             YVL+SNI A A +WD V+  R  MK K V+K P 
Sbjct: 755 GYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPG 790



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 172/712 (24%), Positives = 308/712 (43%), Gaps = 88/712 (12%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLGKSTHAR-----ILNSSQIPDRFLTNNLMTMYSRCG 102
           ++S  + +  ++LR  ++ S L LG   HAR     +L+++      L   L+ MY    
Sbjct: 31  NASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLAR 90

Query: 103 SLVYARRLFDKMPDRDL---ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
               A  +F  +P       + WN ++  +  +G      +   F +      S      
Sbjct: 91  RFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGH---HRLAVLFYVKMWAHPSSPRPDG 147

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            TL  ++K C + G +     VH     +GL  D +V  AL+ +Y+  G +  A+ +FDG
Sbjct: 148 HTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDG 207

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI---SDL--- 273
           M ERD VLW VM+  Y + G       LF  +  SG  P+  ++ C L V    +DL   
Sbjct: 208 MDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSG 267

Query: 274 ----------GKRHEE-------------QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
                     G   E              Q    A +L       ++V WN  +SG +Q 
Sbjct: 268 VQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQN 327

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G    A+  F +M +S +Q DSVT    L A+   +    G++IHG  +++  +  V + 
Sbjct: 328 GLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLV 387

Query: 371 NSLINMYSKMGCV-------------------------------------------CGLR 387
           ++L+++Y K   V                                            G++
Sbjct: 388 SALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIK 447

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            +   +AS L A +S+   + + +++H + +KN      +V +AL+D+Y + G +  + Y
Sbjct: 448 PNAVMVASTLPACASM-AAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHY 506

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F      D  TWN+MI  +  +    +AL+LF  M   G + + +TI++ + AC  L  
Sbjct: 507 MFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPA 566

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           +  GK++H   +K     DL   S ++DMY KCG +  A  +F  +P  ++V+W ++IS 
Sbjct: 567 IYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISA 626

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G    ++ +   M+  G   D  TF  L+ A +    +++G ++   + + +   +
Sbjct: 627 YGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTE-EYHIE 685

Query: 628 PFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           P V     +VD+Y++ G ++ A      M  + +  +W A+L     H N E
Sbjct: 686 PQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVE 737



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/604 (23%), Positives = 261/604 (43%), Gaps = 102/604 (16%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++   +   L LG+  H          D ++ + L+ MY+  G L  AR +FD M +RD
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + WN ++  Y  +G+     V     LFR +R S    +  TLA  L +C +   + + 
Sbjct: 213 CVLWNVMMDGYVKAGD-----VASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSG 267

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H  A+K GL  +  V+  LV++Y+K   + EA  LF  M   D+V W  M+    +N
Sbjct: 268 VQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQN 327

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIK---------- 287
           G  ++   LF D+ +SGL PD  ++  +L  +++L G +  +++  Y ++          
Sbjct: 328 GLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLV 387

Query: 288 ------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                             +     + +VV+ +  +SGY+    +  A++ F  ++   ++
Sbjct: 388 SALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIK 447

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------- 381
            ++V     L A A    + +GQ++HG  LK+ +     V ++L++MYSK G        
Sbjct: 448 PNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYM 507

Query: 382 -----------------------------------CVCGLRTDQFTLASVLRASSSLPEG 406
                                               + G++ +  T++S+L A + LP  
Sbjct: 508 FSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLP-A 566

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           ++  K+IH   IK    AD F  +ALID+Y + G++  A  +FE+    +  +WN++I  
Sbjct: 567 IYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISA 626

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y       ++++L   M   G + D +T    + AC            HA  ++ G  L 
Sbjct: 627 YGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACA-----------HAGQVQEGLRLF 675

Query: 527 LCVS------------SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGE 573
            C++            S ++D+Y + G +  A     D+P  PD   W  ++  C  +  
Sbjct: 676 RCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRN 735

Query: 574 EDLA 577
            +LA
Sbjct: 736 VELA 739



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 146/349 (41%), Gaps = 36/349 (10%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L L   +QKS     S +    S+L      +    GK  H  I+ +    D FL + L
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLA--SLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSAL 390

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + +Y +C  +  A+ +FD     D++  +++++ Y  +    A       ++FR L    
Sbjct: 391 VDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEA-----AVKMFRYLLALG 445

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              + + +A  L  C S   +   + +HGY LK       +V  AL+++YSK G++  + 
Sbjct: 446 IKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSH 505

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL- 273
           ++F  M  +D V W  M+ ++A+NG  EE   LF  +   G+  ++ ++  +L   + L 
Sbjct: 506 YMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLP 565

Query: 274 ----GKR----------------HEEQVQAY--------AIKLLLYNNNSNVVLWNKKLS 305
               GK                     +  Y        A+++  +    N V WN  +S
Sbjct: 566 AIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIIS 625

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            Y   G    +++    M     + D VTFL  ++A A    +  G ++
Sbjct: 626 AYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRL 674


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 224/721 (31%), Positives = 351/721 (48%), Gaps = 95/721 (13%)

Query: 290 LYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTD 346
           L+N  S  ++ L+N  + G+   G    +I  + ++ + +N++ D+ T+  A++A +  +
Sbjct: 68  LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLE 127

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------- 383
           +  +G  +H  ++  G  S + VG++++++Y K                           
Sbjct: 128 DERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMIS 187

Query: 384 --------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                                GL  D  TLA+VL A + L E   L   I   A K    
Sbjct: 188 GFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE-YRLGMGIQCLASKKGLH 246

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           +D +V T LI +Y + G   +   LF+  D  DL ++NAMI GY  ++ +  A+ LF  +
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL 306

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             SG+R++  T+   +        L+  + +   ++K G  L   VS+ +  +Y +   +
Sbjct: 307 LASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEV 366

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A+ +F++ P     +W  MISG   NG  D A+S++ +M +  + P+  T   ++ A 
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSAC 425

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + L AL  G+ +H  +      S+ +V  +LVDMYAKCG+I +A  LF  M  +N V WN
Sbjct: 426 AQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWN 485

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           AM+ G   HG+G+E LKLF +M   G+ P  VTF+ +L ACS++GLVSE  E FH M   
Sbjct: 486 AMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANN 545

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           YG +P  EHY+ +VD LGRAG+   A E I  MP E   ++  ALLGAC +  +TE    
Sbjct: 546 YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANV 605

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------ 831
            +++L  L+P +   YVLLSNI++    +    S R  +K++ + K P            
Sbjct: 606 ASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQY 665

Query: 832 -----------ADLIFAKVEGLIKRIKEGGYVPDT-DFVLLDVEEEEKERALYYHSEKLA 879
                      A  IF  +E L  +++E GY  +T    L DVE+EEKE  +  HSEKLA
Sbjct: 666 VFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLA 725

Query: 880 RAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
            A+GLIST P + I   K                           ANRFHH ++G+C C 
Sbjct: 726 IAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCG 785

Query: 917 D 917
           D
Sbjct: 786 D 786



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 284/616 (46%), Gaps = 65/616 (10%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRL 160
           G++ + R+LF+K+   DL  +N ++  ++ +G   +        L+  LR+         
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSS-----IFLYTHLRKXTNLRPDNF 114

Query: 161 TLAPLLKLCLSSGYVWASETV----HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           T A      +S+      E V    H +++  G+  + FV  A+V++Y KF +   A+ +
Sbjct: 115 TYA----FAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKV 170

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK- 275
           FD M ERD VLW  M+  ++ N + E+   +FVD+   GL  D  ++  VL  +++L + 
Sbjct: 171 FDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEY 230

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           R    +Q  A K  L+   S+V +    +S Y + G +     C     +  + +D +  
Sbjct: 231 RLGMGIQCLASKKGLH---SDVYVLTGLISLYSKCGKS-----C-----KGRILFDQID- 276

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
                     D ++    I G T      SAV +   L+          G R +  TL  
Sbjct: 277 --------QPDLISYNAMISGYTFNHETESAVTLFRELL--------ASGQRVNSSTLVG 320

Query: 396 VLRASSSLP-EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           ++     LP   L LS+ I   ++K   +    VSTAL  VYCR   +  A  LF+    
Sbjct: 321 LIPV--YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPE 378

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
             LA+WNAMI GY  +  + +A+ LF  M       + +T+ + + AC  L  L  GK +
Sbjct: 379 KSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSP-NPVTVTSILSACAQLGALSIGKWV 437

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           H        E ++ VS+ ++DMY KCG++V+A+ +F+ +   + V W  MI+G   +G  
Sbjct: 438 HGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHG 497

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH---ANLIKLDCSSDPFVG 631
             AL ++++M  SG+ P   TF  ++ A S    + +G +I    AN       S+ +  
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA- 556

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE----ETLKLFEDMK 686
             +VD+  + G + +A    ++M +     +W A+L     H N E     + +LF+   
Sbjct: 557 -CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQ--- 612

Query: 687 AHGVEPDSVTFIGVLS 702
              ++P++V +  +LS
Sbjct: 613 ---LDPENVGYYVLLS 625



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 160/375 (42%), Gaps = 41/375 (10%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           + S F++++Y     F  S+  F+       S  S+   ++L       +  LG      
Sbjct: 185 MISGFSRNSY-----FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
                   D ++   L+++YS+CG     R LFD++   DLIS+N++++ Y  + E  + 
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES- 298

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
                  LFR L  S    +  TL  L+ + L   ++  S  +   +LKIG++    VS 
Sbjct: 299 ----AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVST 354

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL  +Y +  +++ A+ LFD   E+ +  W  M+  Y +NG  +    LF ++    L P
Sbjct: 355 ALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSP 413

Query: 259 DDESVQCVLGVISDLG--------------KRHEEQVQAYAIKLLLYNN----------- 293
           +  +V  +L   + LG              +R E  V      + +Y             
Sbjct: 414 NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF 473

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + NVV WN  ++GY   G    A++ F  M++S +    VTFL  L A + +  ++
Sbjct: 474 DLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVS 533

Query: 350 LGQQI-HGTTLKSGF 363
            G +I H      GF
Sbjct: 534 EGNEIFHSMANNYGF 548


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 235/780 (30%), Positives = 392/780 (50%), Gaps = 48/780 (6%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+   S  D   G + +  I+ +    D ++  +L+ M+ + G L  AR +FDKMP +D
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE---SITFTSRLTLAPLLKLCLSSGYV 175
            + WN+++     SG   + N  E   +F  ++     +   S L LAP +      G V
Sbjct: 165 GVCWNAMI-----SGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVS---RLGDV 216

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              +++HGY ++  +     VS +L+++Y K G +  A+ +FD M  RD V W  M+  Y
Sbjct: 217 GCCKSIHGYVVRRSIC--GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGY 274

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN 294
            +NG   E   L   + R  +  +  +V   L V++++    + +++  YA+++ L    
Sbjct: 275 VKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLM--- 331

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           S++V+    +  Y + G+   A E F+++  R  V + +  FL AL              
Sbjct: 332 SDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSA--FLSAL-------------- 375

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                +++G+   V+   S+  +    G    L+ D+  L S+L +  +    + L K +
Sbjct: 376 -----VETGYPREVL---SIFQVMQYEG----LKPDKAIL-SILVSGCTEISNIGLGKIM 422

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H +AIK D  +D  + T L+ +Y R      A  LF      D+  WN +I G+    + 
Sbjct: 423 HCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDP 482

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           H ALE+F+ +  SG   D  T+     AC  +  L  G  +H    KSGFE D+ V   +
Sbjct: 483 HLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVAL 542

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +DMY KCG++   + +F       D+V+W  MI+G + NG  + A+S + +M+L  V P+
Sbjct: 543 MDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPN 602

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
             TF  ++ A S L+ L +    H  +I++   S   +G SL+DMYAKCG +  +   F 
Sbjct: 603 LVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFH 662

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           +M+ ++T+ WNAML   A HG GE  + LF  M+   V  DSV++I VLSAC ++GL+ E
Sbjct: 663 EMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQE 722

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            ++ F  M EK+ +EP +EHY+ +VD LG AG   E   L+  M  E  A +  ALL AC
Sbjct: 723 GWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAAC 782

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           ++  +   G+     L+ LEP +   +V+LS+I+A   +W+D    R  +    +KK P 
Sbjct: 783 KIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPG 842



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 234/504 (46%), Gaps = 47/504 (9%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N +++L+N  +  Y +    H AI  +  +++  ++ D  TF   L A     + + G  
Sbjct: 61  NPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVN 120

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGC----------------VC------------- 384
           I+   + +G    V +G SLI+M+ KMGC                VC             
Sbjct: 121 IYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLN 180

Query: 385 --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G   D+ ++ ++  A S L + +   K IH + ++        VS 
Sbjct: 181 PCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGD-VGCCKSIHGYVVRRSICG--VVSN 237

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +LID+YC+ G +  A+ +F+     D  +W  M+ GY+ +    + L+L   M     ++
Sbjct: 238 SLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKM 297

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           +++ +  A+     +  L++GK+++ YA++ G   D+ V++ I+ MY KCG +  A+ +F
Sbjct: 298 NKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELF 357

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
             +   D VAW+  +S  V+ G     LSI+  M+  G+ PD+   +ILV   + ++ + 
Sbjct: 358 LSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIG 417

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G+ +H   IK D  SD  +  +LV MY +      A  LF +M +++ V+WN ++ G  
Sbjct: 418 LGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFT 477

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           ++G+    L++F  ++  G+ PDS T +G+ SAC+    +       H   EK G E ++
Sbjct: 478 KYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG-TCLHGGIEKSGFESDI 536

Query: 731 EHYSFLVDALGRAGRTKEAGELIL 754
                L+D   + G       L L
Sbjct: 537 HVKVALMDMYAKCGSLCSVERLFL 560



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 165/666 (24%), Positives = 292/666 (43%), Gaps = 118/666 (17%)

Query: 58  SILRHAISTS---DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
           SIL  A + S   D+   KS H  ++  S      ++N+L+ MY +CG +  A+R+FD+M
Sbjct: 202 SILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRM 259

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             RD +SW +++A Y  +G        EG +L   +R      +++ +   L +      
Sbjct: 260 GVRDDVSWATMMAGYVKNG-----CYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRD 314

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + ++ YAL++GL+ D  V+  +V +Y+K G++++A+ LF  ++ RD+V W   L A
Sbjct: 315 LEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSA 374

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGK-RHEEQVQA----- 283
             E G+  EV  +F  +   GL PD   +  ++   ++     LGK  H   ++A     
Sbjct: 375 LVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESD 434

Query: 284 ------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                             YA+ L       ++V+WN  ++G+ + GD H A+E F  +  
Sbjct: 435 ISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQL 494

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC- 384
           S +  DS T +   +A A  D+L+LG  +HG   KSGF S + V  +L++MY+K G +C 
Sbjct: 495 SGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCS 554

Query: 385 -------------------------------------------GLRTDQFTLASVLRASS 401
                                                       +R +  T  ++L A S
Sbjct: 555 VERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVS 614

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L  +   H   I+   ++ + +  +LID+Y + G +  +E  F   +  D  +WN
Sbjct: 615 YLSI-LREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWN 673

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AM+  Y +      A+ LFS M  S  R+D ++  + + AC            H+  ++ 
Sbjct: 674 AMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSAC-----------RHSGLIQE 722

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           G+++                +M +   +    P+ +  A    + GC   G  D  LS+ 
Sbjct: 723 GWDI--------------FASMCEKHHVE---PSMEHYACMVDLLGCA--GLFDEVLSLL 763

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
           ++M      PD   +  L+ A    + +  G     +L+KL+   +P   + L D+YA+C
Sbjct: 764 NKMTTE---PDARVWGALLAACKIHSNVTLGEVAVHHLLKLE-PRNPVHHVVLSDIYAQC 819

Query: 642 GNIEDA 647
           G   DA
Sbjct: 820 GRWNDA 825



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 61/311 (19%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + SILR A++          H  I+    +    + N+L+ MY++CG L Y+ + F +M 
Sbjct: 615 YLSILREAMAF---------HTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEME 665

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++D ISWN++L+AYA  G+G          LF  ++ES      ++   +L  C  SG +
Sbjct: 666 NKDTISWNAMLSAYAMHGQGEL-----AVALFSVMQESNVRVDSVSYISVLSACRHSGLI 720

Query: 176 WASETVHGYALKIGLVWDEFVS--------------GALVNIYSKFGKIREAKFLFDGM- 220
                           WD F S                +V++    G   E   L + M 
Sbjct: 721 QEG-------------WDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMT 767

Query: 221 QERDVVLWKVMLRA---YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG-VISDLGKR 276
            E D  +W  +L A   ++    GE   H  + L      P +     VL  + +  G+ 
Sbjct: 768 TEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLE-----PRNPVHHVVLSDIYAQCGRW 822

Query: 277 HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
           ++ +     I      NN  +    KK+ GY  VG +   +E     I  +  ++S + L
Sbjct: 823 NDARRTRSHI------NNHGL----KKIPGYSWVGAHKNEMEKKPTRITMSCNHESASEL 872

Query: 337 VALAAVAGTDN 347
              A+    DN
Sbjct: 873 TKSASKTAFDN 883


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/582 (33%), Positives = 308/582 (52%), Gaps = 58/582 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D  T + +++   S    +H    I  H   N      F+   LI++Y +   + +
Sbjct: 56  GLWADSATYSELIKCCIS-NRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ +W  MI  Y       KALEL   M     R +  T ++ +++C  
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN- 173

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
              +   + +H   +K G E D+ V S ++D++ K G   DA S+F+++   D + W ++
Sbjct: 174 --GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   N   D+AL ++ +M+ +G + ++ T   +++A + L  LE G Q H +++K D 
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 290

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             D  +  +LVDMY KCG++EDA  +F QM  R+ + W+ M+ GLAQ+G  +E LKLFE 
Sbjct: 291 -QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           MK+ G +P+ +T +GVL ACS+ GL+ + +  F  M++ YGI+P  EHY  ++D LG+AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           +  +A +L+  M  E  A   R LLGACRVQ +    ++ A+K++AL+P D+  Y LLSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFA----------------KVEG 841
           I+A + +WD V   R  M+ + +KK+P          I A                K+  
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK---- 897
           LI R+   GYVP+T+FVL D+E E+ E +L +HSEKLA A+GL++ P   VI   K    
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRI 589

Query: 898 ----------------------EPLYANRFHHLRDGMCPCAD 917
                                 +P+   R+HH +DG C C D
Sbjct: 590 CGDCHVFCKLASKLEIRSIVIRDPI---RYHHFQDGKCSCGD 628



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 172/388 (44%), Gaps = 48/388 (12%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A++    + + G   D  T +  +K C     + +G  +  +   +G    + + + ++
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +MYVK   + DA  +F+ +P  + ++WTTMIS          AL +   M    V P+ +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T++ +++  SC   +   R +H  +IK    SD FV  +L+D++AK G  EDA  +F +M
Sbjct: 164 TYSSVLR--SC-NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS--------- 705
              + ++WN+++ G AQ+   +  L+LF+ MK  G   +  T   VL AC+         
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 706 ------------------------YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
                                     G + +A   F+ M+E+     +V  +S ++  L 
Sbjct: 281 QAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-----DVITWSTMISGLA 335

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWV---AEKLMALEPFD 795
           + G ++EA +L   M    +   +  ++G   AC   G  E G +     +KL  ++P  
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV- 394

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMK 823
              Y  + ++   A + DD      EM+
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEME 422



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 199/493 (40%), Gaps = 96/493 (19%)

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            ++    +   SL+    +    T + L+K C+S+  V     +  +    G     F+ 
Sbjct: 40  RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+N+Y KF  + +A  LFD M +R+V+ W  M+ AY++    ++   L V + R  + 
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 258 PDDESVQCVL--------------GVISDLGKRHEEQVQAYAIKLL-----------LYN 292
           P+  +   VL              G+I + G   +  V++  I +            +++
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFD 218

Query: 293 N--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                + ++WN  + G+ Q   +  A+E F  M R+    +  T    L A  G   L L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           G Q H   +K  +   +I+ N+L++MY    C CG      +L   LR  + + E     
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMY----CKCG------SLEDALRVFNQMKER---- 322

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
                                                        D+ TW+ MI G   +
Sbjct: 323 ---------------------------------------------DVITWSTMISGLAQN 337

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             S +AL+LF  M +SG + + ITI   + AC    +L+ G   +  +MK  + +D    
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVRE 396

Query: 531 --SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
               ++D+  K G + DA  + N++   PD V W T++  C    + ++ L+ Y   ++ 
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC--RVQRNMVLAEYAAKKVI 454

Query: 588 GVVP-DEFTFAIL 599
            + P D  T+ +L
Sbjct: 455 ALDPEDAGTYTLL 467



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 50/375 (13%)

Query: 18  VIFSSFTKDTY-RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           ++ S FT+  Y R+LP  ++  +  LQ     + S++  +  +++  IS   +  G    
Sbjct: 28  LLLSEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSAT--YSELIKCCISNRAVHEGNLIC 84

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
             +  +   P  FL N L+ MY +   L  A +LFD+MP R++ISW ++++AY+      
Sbjct: 85  RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC--KI 142

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
            +   E   L   LR+++   +  T + +L+ C     V     +H   +K GL  D FV
Sbjct: 143 HQKALELLVLM--LRDNVR-PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFV 196

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
             AL+++++K G+  +A  +FD M   D ++W  ++  +A+N   +    LF  + R+G 
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256

Query: 257 CPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYN------------------- 292
             +  ++  VL   +     +LG +    +  Y   L+L N                   
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316

Query: 293 ---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 +V+ W+  +SG  Q G +  A++ F  M  S  + + +T +  L A +      
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS------ 370

Query: 350 LGQQIHGTTLKSGFY 364
                H   L+ G+Y
Sbjct: 371 -----HAGLLEDGWY 380


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 219/757 (28%), Positives = 359/757 (47%), Gaps = 127/757 (16%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A ++ +  +  +VV ++  +S + ++     AI+ F  M  S ++ +  +F+  L A   
Sbjct: 156 AYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIR 215

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
           +  L +G Q+H   +K G+   V V N+LI +Y K GC+                     
Sbjct: 216 SLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTM 275

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   G + DQFTL+++L A +     +   ++IH +AI+ 
Sbjct: 276 ISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQ-GREIHAYAIRI 334

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW-------------------- 460
               +  VS A+I  Y R GS+     LFE     D+ TW                    
Sbjct: 335 GLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMF 394

Query: 461 -----------NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                      NA++ G+  +N   KAL LF  M   G  L + T+   + ACG LL L+
Sbjct: 395 NKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLE 454

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP--DDVAWTTMISG 567
             +Q+H + +K GF  + C+ + ++DM  KCG M DA  +F  +     + +  T+MI G
Sbjct: 455 ISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICG 514

Query: 568 CVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
              NG  + A+ ++++ +  G +V DE  F  ++     L   E G+QIH   +K    +
Sbjct: 515 YARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHA 574

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           +  VG S++ MY+KC NI+DA   F  M   + V WN ++ G   H  G+E L ++  M+
Sbjct: 575 ELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSME 634

Query: 687 AHGVEPDSVTFIGVLSACSYTG--LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             G++PD++TF+ ++SA  +T   L+ E    F  M+  + +EP  EHY+ LV  LG  G
Sbjct: 635 KAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWG 694

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
             +EA ELI  MPF+   S+ RALL  CR+  +T  GK VA+ ++ +EP D S YVL+SN
Sbjct: 695 LLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSN 754

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEG 841
           ++AA+ +W      R  M+ + ++K P                       ++ I++ ++ 
Sbjct: 755 LYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDI 814

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS----------- 890
           LI +  + GY PD  FVL +VEE++K+  L+YHS KLA  YGL+ T P            
Sbjct: 815 LILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILL 874

Query: 891 ----------SVILSNKEPLY--ANRFHHLRDGMCPC 915
                     + +++ +E ++  A+ FH   +G C C
Sbjct: 875 CRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSC 911



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 146/630 (23%), Positives = 259/630 (41%), Gaps = 133/630 (21%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           F++LR ++  +D+ L ++ HA IL   +  D  L N ++  Y + G +V A  +F  M  
Sbjct: 108 FNLLRLSVKYTDIDLARALHASILKLGE--DTHLGNAVIAAYIKLGLVVDAYEVFMGMST 165

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            D++S+++++++++   + N E  TE  +LF  +R S    +  +   +L  C+ S  + 
Sbjct: 166 PDVVSYSALISSFS---KLNRE--TEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELE 220

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               VH  A+K+G     FV+ AL+ +Y K G +  A  LFD M +RD+  W  M+ +  
Sbjct: 221 MGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLV 280

Query: 237 ENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN 294
           +    E+   LF  L+++ G   D  ++  +L   +    R +  ++ AYAI++ L NN 
Sbjct: 281 KGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNL 340

Query: 295 S----------------------------NVVLWNKKLSGYLQVG--------------- 311
           S                            +++ W + ++ Y++ G               
Sbjct: 341 SVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEK 400

Query: 312 --------------DNHG--AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
                         +N G  A+  FV M++   +    T    + A      L + +QIH
Sbjct: 401 NSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIH 460

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG------------------------CVCG------ 385
           G  +K GF S   +  +LI+M SK G                         +CG      
Sbjct: 461 GFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGL 520

Query: 386 ----------------LRTDQFTLASVLRASSSLPEGLH-LSKQIHVHAIKNDTVADSFV 428
                           +  D+    S+L    +L  G H + KQIH  A+K    A+  V
Sbjct: 521 PEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTL--GFHEVGKQIHCQALKTGFHAELGV 578

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             ++I +Y +  ++ +A   F    G D+ +WN +I G +L     +AL ++S M  +G 
Sbjct: 579 GNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGI 638

Query: 489 RLDEITIATAVKACG---------CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           + D IT    V A           C  +    K +H     S     L    G+L  +  
Sbjct: 639 KPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLV---GVLGYW-- 693

Query: 540 CGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            G + +A+ + N +P  P+   W  ++ GC
Sbjct: 694 -GLLEEAEELINKMPFDPEVSVWRALLDGC 722



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 187/404 (46%), Gaps = 36/404 (8%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           L ++LR S    + + L++ +H   +K     D+ +  A+I  Y + G + +A  +F   
Sbjct: 107 LFNLLRLSVKYTD-IDLARALHASILKLGE--DTHLGNAVIAAYIKLGLVVDAYEVFMGM 163

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              D+ +++A+I  +   N   +A++LF  M  SG   +E +    + AC   L L+ G 
Sbjct: 164 STPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGL 223

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           Q+HA A+K G+   + V++ ++ +Y KCG +  A  +F+++P  D  +W TMIS  V   
Sbjct: 224 QVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGL 283

Query: 573 EEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
             + AL ++  +  + G   D+FT + L+ A +   A  QGR+IHA  I++   ++  V 
Sbjct: 284 SYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVS 343

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLW----------------------------- 662
            +++  Y +CG++     LF++M +R+ + W                             
Sbjct: 344 NAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSV 403

Query: 663 --NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
             NA+L G  ++  G + L LF  M   G E    T  GV++AC    L  E     H  
Sbjct: 404 SYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLL-LKLEISRQIHGF 462

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
             K+G        + L+D   + GR  +A  +  S+  +   S+
Sbjct: 463 IIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSI 506


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 208/594 (35%), Positives = 308/594 (51%), Gaps = 59/594 (9%)

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           +S M   C L  D FT   V +AS+SL   +   KQ+H  A+K   + D FV  +  D+Y
Sbjct: 97  FSNMRRECVLPND-FTFPCVFKASASLHMPV-TGKQLHALALKGGNILDVFVGCSAFDMY 154

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + G   EA  +F+     +LATWNA +   +       A+  F          + IT  
Sbjct: 155 SKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFC 214

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
             + AC  ++ L+ G+Q+H + ++S +  D+ V +G++D Y KCG +V ++ +F+ I + 
Sbjct: 215 AFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSG 274

Query: 556 -PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             + V+W ++++  V N EE+ A  ++ Q R   V P +F  + ++ A + L  LE GR 
Sbjct: 275 RRNVVSWCSLLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRS 333

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +HA  +K     + FVG +LVD+Y KCG+IE A  +F++M  RN V WNAM+ G A  G+
Sbjct: 334 VHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGD 393

Query: 675 GEETLKLFEDMKAH--GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
            +  L LF++M +   G+    VT + VLSACS  G V    + F  MR +YGIEP  EH
Sbjct: 394 VDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEH 453

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD LGR+G    A E I  MP   + S+  ALLGAC++ G T+ GK  AEKL  L+
Sbjct: 454 YACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELD 513

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMK----RKNV--------------------- 827
           P DS  +V+ SN+ A+A +W++ T  R EM+    +KNV                     
Sbjct: 514 PDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFH 573

Query: 828 -KKDPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
            K      + AK+ G    +K+ GYVPD +  L D+EEEEK   ++YHSEK+A A+GLI+
Sbjct: 574 EKNSEIQAMLAKLRG---EMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLIT 630

Query: 887 TPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCAD 917
            P    I   K                            NRFH  +DG C C D
Sbjct: 631 LPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKD 684



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 200/422 (47%), Gaps = 11/422 (2%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIK-NDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           L S + + SSL     L + +H H ++ +DT   SF+   L+++Y +      A+ +   
Sbjct: 14  LESAVLSRSSL-----LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSL 68

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
            +   + TW ++I G + +     AL  FS+M       ++ T     KA   L M   G
Sbjct: 69  TNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTG 128

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           KQ+HA A+K G  LD+ V     DMY K G   +A+++F+++P  +   W   +S  V +
Sbjct: 129 KQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQD 188

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G    A++ + +       P+  TF   + A + + +LE GRQ+H  +++     D  V 
Sbjct: 189 GRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVF 248

Query: 632 ISLVDMYAKCGNIEDAYILFKQM--DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
             L+D Y KCG+I  + ++F ++    RN V W ++L  L Q+   E    +F   +   
Sbjct: 249 NGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE- 307

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           VEP       VLSAC+  G + E   + H +  K  +E  +   S LVD  G+ G  + A
Sbjct: 308 VEPTDFMISSVLSACAELGGL-ELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYA 366

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            ++   MP E +     A++G     GD +    + +++ +     + +YV L ++ +A 
Sbjct: 367 EQVFREMP-ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSAC 425

Query: 810 NQ 811
           ++
Sbjct: 426 SR 427



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 150/364 (41%), Gaps = 50/364 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           S L  A+ +   LLG++ HA IL +   P   FL N+L+ MYS+      A+ +      
Sbjct: 12  SFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNP 71

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R +++W S+++   H+        T     F ++R      +  T   + K   S     
Sbjct: 72  RTVVTWTSLISGCVHN-----RRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPV 126

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +H  ALK G + D FV  +  ++YSK G   EA+ +FD M  R++  W   +    
Sbjct: 127 TGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAV 186

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDES---------VQCVLGVISDLGK---------RHE 278
           ++G   +    F    +  LC D E            C   V  +LG+         R+ 
Sbjct: 187 QDGRCLDAIAAF----KKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYR 242

Query: 279 EQVQAYAIKLLLY-----------------NNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
           E V  +   +  Y                 +   NVV W   L+  +Q   NH      +
Sbjct: 243 EDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQ---NHEEERACM 299

Query: 322 NMIRSNVQYDSVTFLVA--LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
             +++  + +   F+++  L+A A    L LG+ +H   LK+     + VG++L+++Y K
Sbjct: 300 VFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGK 359

Query: 380 MGCV 383
            G +
Sbjct: 360 CGSI 363



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSIL 126
           L LG+  H  I+ S    D  + N L+  Y +CG +V +  +F ++    R+++SW S+L
Sbjct: 226 LELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLL 285

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           AA   + E           +F   R+ +  T    ++ +L  C   G +    +VH  AL
Sbjct: 286 AALVQNHEEE-----RACMVFLQARKEVEPTD-FMISSVLSACAELGGLELGRSVHALAL 339

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K  +  + FV  ALV++Y K G I  A+ +F  M ER++V W  M+  YA  G  +    
Sbjct: 340 KACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALS 399

Query: 247 LFVDLHRSGLC 257
           LF ++  SG C
Sbjct: 400 LFQEM-TSGSC 409



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LG+S HA  L +    + F+ + L+ +Y +CGS+ YA ++F +MP+R
Sbjct: 317 SVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPER 376

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT--FTSRLTLAPLLKLCLSSGYV 175
           +L++WN+++  YAH G+     V     LF+ +         S +TL  +L  C  +G V
Sbjct: 377 NLVTWNAMIGGYAHLGD-----VDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAV 431


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 179/476 (37%), Positives = 276/476 (57%), Gaps = 2/476 (0%)

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           +T+ +G Y+A        +++  M   C     +F   +VL A S +P GL + +Q+H  
Sbjct: 82  STMVAG-YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVS-VPLGLLMGEQMHGL 139

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            +K+  +    V  +L+ +Y + G M  A ++FE+    +  TW+AMI GY  +  +  A
Sbjct: 140 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 199

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           + +FS MH +G    E T    + A   L  L  GKQ H   +K GFE+ + V S ++DM
Sbjct: 200 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 259

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y KCG + DA+  F+ +   D V WT M+SG V NGE + AL++Y +M   G++P + T 
Sbjct: 260 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 319

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           A  ++A + + ALE G+Q+H  ++K        VG +L  MY+KCGN+ED   +F+++  
Sbjct: 320 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 379

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           R+ + WN+++ G +Q+G G   L LFE+MK  G  PD++TFI +L ACS+ GLV   +E 
Sbjct: 380 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 439

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F LM + YG+ P ++HY+ +VD L RAG  KEA + I S+  +    + R +LGACR   
Sbjct: 440 FSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLR 499

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           D + G +  E+LM L   DSSAY+LLSNI+A+  +W+DV   R  M+ + V KDP 
Sbjct: 500 DFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPG 555



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 159/306 (51%), Gaps = 2/306 (0%)

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
            V++ +V T+L+++YC+ G +++A  +F+     +  +W+ M+ GY     S +A +LF 
Sbjct: 43  AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 102

Query: 482 HMHTSGERLDEITIATAV-KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
            M           +ATAV  A    L L  G+QMH   +K G    + V + ++ MY K 
Sbjct: 103 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 162

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G M  A  +F      + + W+ MI+G   NGE D A+S++ QM  +G  P EFTF  ++
Sbjct: 163 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 222

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            ASS L AL  G+Q H  ++KL      +V  +LVDMYAKCG I DA   F Q+   + V
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           LW AM+ G  Q+G  EE L L+  M   G+ P   T    L AC+    + E  +  H  
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL-EPGKQLHTQ 341

Query: 721 REKYGI 726
             KYG+
Sbjct: 342 IVKYGL 347



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 211/519 (40%), Gaps = 98/519 (18%)

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT- 141
           S + + ++  +L+ MY + G +  ARR+FD MP R+  SW++++A YA      AE  + 
Sbjct: 42  SAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYA------AEKCSE 95

Query: 142 EGFRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
           E F LFR  L E  +  S      +L        +   E +HG  +K GL+    V  +L
Sbjct: 96  EAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSL 155

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           V +Y+K G +  A  +F+  +ER+ + W  M+  YA+NG  +    +F  +H +G  P +
Sbjct: 156 VTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTE 215

Query: 261 ESVQCVLGVISDLGK------------RHEEQVQAYAIKLL--LYNN------------- 293
            +   VL   SDLG             +   +VQ Y    L  +Y               
Sbjct: 216 FTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 275

Query: 294 --NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               ++VLW   +SG++Q G++  A+  +  M +  +     T    L A AG   L  G
Sbjct: 276 LYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPG 335

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           +Q+H   +K G      VG++L  MYSK G                    +L +G+ + +
Sbjct: 336 KQLHTQIVKYGLGLGAPVGSALSTMYSKCG--------------------NLEDGMSVFR 375

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           +I       D +A                                   WN++I G+  + 
Sbjct: 376 RIP----DRDVIA-----------------------------------WNSIISGFSQNG 396

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVS 530
             + AL+LF  M   G   D IT    + AC  + ++ +G +  +   K  G    L   
Sbjct: 397 CGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHY 456

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
           + ++D+  + G + +A+     I        W  ++  C
Sbjct: 457 ACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGAC 495



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 41/336 (12%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           LL+G+  H  I+    +    + N+L+TMY++ G +  A  +F+   +R+ I+W++++  
Sbjct: 130 LLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 189

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YA +GE ++        +F  +  +    +  T   +L      G +   +  HG  +K+
Sbjct: 190 YAQNGEADS-----AVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKL 244

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G     +V  ALV++Y+K G I +AK  FD + E D+VLW  M+  + +NG  EE   L+
Sbjct: 245 GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLY 304

Query: 249 VDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKL---------LLYNNN 294
             + + G+ P   ++   L   + +     GK+   Q+  Y + L          +Y+  
Sbjct: 305 ARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKC 364

Query: 295 SN---------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
            N               V+ WN  +SG+ Q G  +GA++ F  M       D++TF+  L
Sbjct: 365 GNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL 424

Query: 340 AAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
            A +       G +  +L  + +G T +   Y+ ++
Sbjct: 425 CACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMV 460



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS-SDPFVGISLVDMYAKCGNIE 645
           S V+P   +FA    A++   +   G   HA   K+  + S+ +V  SL++MY K G + 
Sbjct: 5   STVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVS 64

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           DA  +F  M  RN+  W+ M+ G A     EE   LF  M
Sbjct: 65  DARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 104


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 203/673 (30%), Positives = 336/673 (49%), Gaps = 99/673 (14%)

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           ++  S  Q D+V++   +A  +G        +++ T L++G                   
Sbjct: 93  SLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAG------------------- 133

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
               +R  + T+++++ A+S+L +   L +Q H   ++     ++FV + L+ +Y + G 
Sbjct: 134 --SSVRPSRITMSAMVMAASALGDRA-LGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 442 MAEAEYLFENKDG-------------------------------FDLATWNAMIFGYILS 470
           + +A+ +F+  DG                                D  TW  M+ G+  +
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +AL  F  M   G  +D+ T  + + ACG L  L+QGKQ+HAY +++ ++ ++ V 
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S ++DMY KC ++  A++ F  +   + ++WT +I G   NG  + A+ ++ +M+  G+ 
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+FT   ++ + + L +LE+G Q H   +         V  +LV +Y KCG+IEDA+ L
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M   + V W A++ G AQ G  +ET+ LFE M A  V+PD VTFIGVLSACS  G V
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            +    FH M++ +GI P  +HY+ ++D   R+GR KEA E I  MP    A     LL 
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR++GD E G+W AE L+ ++P + ++YVLL ++ A    W+ V   R  M+ + VKK+
Sbjct: 551 ACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKE 610

Query: 831 P-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                       +  I+ K+E L  ++ E GY PD   VL DV + +K
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDK 670

Query: 868 ERALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANR 904
              + +HSEKLA A+GL+  P   P  ++                  ++ ++ L   A R
Sbjct: 671 VHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVR 730

Query: 905 FHHLRDGMCPCAD 917
           FH   +G+C C D
Sbjct: 731 FHKFSNGVCSCGD 743



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 231/497 (46%), Gaps = 25/497 (5%)

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           F   AL++  +    + +   LF  M +RD V +  ++  ++  G       L+  L R+
Sbjct: 73  FTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRA 132

Query: 255 G--LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           G  + P   ++  ++   S LG R     + +  ++L      N  + +  +  Y ++G 
Sbjct: 133 GSSVRPSRITMSAMVMAASALGDR--ALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 313 NHGAIECFVNMIRSNV-QYDS-VTFLVALAAVAGTDNL----NLGQQIHGTTLKSGFYSA 366
              A   F  M   NV  Y++ +T L+    V     L         I  TT+ +GF   
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
            +   +L N + +M    G+  DQ+T  S+L A  +L   L   KQIH + I+     + 
Sbjct: 251 GLESQAL-NFFRRMR-FQGIAIDQYTFGSILTACGAL-SALEQGKQIHAYIIRTHYDDNV 307

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           FV +AL+D+Y +  S+  AE  F      ++ +W A+I GY  +  S +A+ +FS M   
Sbjct: 308 FVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G   D+ T+ + + +C  L  L++G Q H  A+ SG    + VS+ ++ +Y KCG++ DA
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
             +F+++   D V+WT +++G    G     + ++ +M    V PD  TF  ++ A S  
Sbjct: 428 HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRA 487

Query: 607 TALEQG------RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NT 659
             +E+G       Q    ++ +D   D +    ++D+Y++ G +++A    KQM M  + 
Sbjct: 488 GFVEKGCSYFHSMQKDHGIVPID---DHYT--CMIDLYSRSGRLKEAEEFIKQMPMHPDA 542

Query: 660 VLWNAMLVGLAQHGNGE 676
           + W  +L      G+ E
Sbjct: 543 IGWGTLLSACRLRGDME 559



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 150/342 (43%), Gaps = 51/342 (14%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG-EGN 136
           R+ +     +  + N ++T   RC  +  ARRLF+ M DRD I+W +++  +  +G E  
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
           A N       FR +R       + T   +L  C +   +   + +H Y ++     + FV
Sbjct: 256 ALN------FFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFV 309

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
             ALV++YSK   I+ A+  F  M  ++++ W  ++  Y +NG  EE   +F ++ R G+
Sbjct: 310 GSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL---------------LYNNNSNV---- 297
            PDD ++  V+   ++L    EE  Q + + L+               LY    ++    
Sbjct: 370 DPDDFTLGSVISSCANLASL-EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428

Query: 298 -----------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA--- 343
                      V W   ++GY Q G     I+ F  M+  +V+ D VTF+  L+A +   
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488

Query: 344 ----GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
               G    +  Q+ HG       Y+       +I++YS+ G
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPIDDHYTC------MIDLYSRSG 524



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 130/617 (21%), Positives = 223/617 (36%), Gaps = 153/617 (24%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           SSQ+ ++L  A  T     G + H  IL +    P   L N+L+T Y + G    ARR+F
Sbjct: 6   SSQYAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVF 64

Query: 112 DKMPDRDLISWNSILAAYAHS----------------GEGNAENVTEGF----------R 145
           D  P  +L ++N++L+  AH+                   +   V  GF          R
Sbjct: 65  DATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVR 124

Query: 146 LFRSLRE--SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           L+ +L    S    SR+T++ ++    + G        H   L++G   + FV   LV +
Sbjct: 125 LYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGM 184

Query: 204 YSKFGKI-------------------------------REAKFLFDGMQERDVVLWKVML 232
           Y+K G I                                EA+ LF+ M +RD + W  M+
Sbjct: 185 YAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMV 244

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLY 291
             + +NG   +  + F  +   G+  D  +   +L     L    + +Q+ AY I+   Y
Sbjct: 245 TGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIR-THY 303

Query: 292 NNN-----------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
           ++N                              N++ W   + GY Q G +  A+  F  
Sbjct: 304 DDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSE 363

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M R  +  D  T    +++ A   +L  G Q H   L SG    + V N+L+ +Y K G 
Sbjct: 364 MQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG- 422

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                              S+ +   L  ++  H        D    TAL+  Y + G  
Sbjct: 423 -------------------SIEDAHRLFDEMLFH--------DQVSWTALVTGYAQFGRA 455

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            E                                ++LF  M     + D +T    + AC
Sbjct: 456 KE-------------------------------TIDLFEKMLAKDVKPDGVTFIGVLSAC 484

Query: 503 GCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVA 560
                +++G    H+     G        + ++D+Y + G + +A+     +P  PD + 
Sbjct: 485 SRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIG 544

Query: 561 WTTMISGCVDNGEEDLA 577
           W T++S C   G+ ++ 
Sbjct: 545 WGTLLSACRLRGDMEIG 561



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG--VVPDEFTFAILVKA 602
           D  S+F  +   D V++  +I+G    G    A+ +YH +  +G  V P   T + +V A
Sbjct: 90  DMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMA 149

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
           +S L     GRQ H  +++L    + FVG  LV MYAK G I DA  +F +MD +N V++
Sbjct: 150 ASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMY 209

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           N M+ GL +    EE  +LFE M     + D +T+  +++  +  GL S+A   F  MR 
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVM----TDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265

Query: 723 KYGIEPEVEHYSF 735
           + GI   ++ Y+F
Sbjct: 266 Q-GI--AIDQYTF 275



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 6/237 (2%)

Query: 39  LPFLQKSHFSSSSSSSQWF-SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM 97
           L F ++  F   +     F SIL    + S L  GK  HA I+ +    + F+ + L+ M
Sbjct: 257 LNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDM 316

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           YS+C S+  A   F +M  +++ISW +++  Y  +G        E  R+F  ++      
Sbjct: 317 YSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSE-----EAVRVFSEMQRDGIDP 371

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
              TL  ++  C +   +      H  AL  GL+    VS ALV +Y K G I +A  LF
Sbjct: 372 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           D M   D V W  ++  YA+ G  +E   LF  +    + PD  +   VL   S  G
Sbjct: 432 DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 190/532 (35%), Positives = 289/532 (54%), Gaps = 46/532 (8%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI  Y +NG +  A  LF+     ++ATWNAM+ G   S  + ++L  F  M   G + D
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E  + +  + C  L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + D ++   
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P+ + V+  T ISG   NG+ + AL  +  MR +GV  +  TF   V + S L AL Q
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA  IK        V  SLV MY++CG + D+  +  +    + VL +AM+     
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG+G++ + LF+ M A G EP+ VTF+ +L ACS++GL  E    F LM + YG++P V+
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 305

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGR+G   EA +LILSMP +    + + LL AC+ Q   +  + +AE+++ L
Sbjct: 306 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 365

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
           +P DS++YVLLSNI A +++W+DV+  R  M+ +NV+K+P                    
Sbjct: 366 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 425

Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 I   +E ++ RI++ GY PD   V  D+E+EEKE +L +HSEKLA A+  +S P
Sbjct: 426 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 485

Query: 889 P-----------------------SSVILSNKEPLYANRFHHLRDGMCPCAD 917
                                   S VI         +RFHH +DG C C D
Sbjct: 486 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGD 537



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 171/371 (46%), Gaps = 34/371 (9%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  + GY++ GD   A + F  M   NV   +       A VAG  N  L ++      
Sbjct: 3   WNILIGGYVKNGDLETARKLFDEMPARNVATWN-------AMVAGLTNSGLNEE------ 49

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
             GF+ A         M  +     G++ D++ L S+ R  + L + +   +Q+H + ++
Sbjct: 50  SLGFFFA---------MRRE-----GMQPDEYGLGSLFRCCAGLRDVVS-GRQVHAYVVR 94

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           +    D  V ++L  +Y R G + + E         ++ + N  I G   + ++  ALE 
Sbjct: 95  SGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEF 154

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  M  +G   + +T  +AV +C  L  L QG+Q+HA A+K+G +  + V + ++ MY +
Sbjct: 155 FCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSR 214

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG + D++ +  +    D V  + MIS    +G    A+ ++ QM  +G  P+E TF  L
Sbjct: 215 CGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTL 274

Query: 600 VKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           + A S     ++G      + K   L  S   +  I  VD+  + G + +A  L   M +
Sbjct: 275 LYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCI--VDLLGRSGCLNEAEDLILSMPV 332

Query: 657 R-NTVLWNAML 666
           + + V+W  +L
Sbjct: 333 QPDGVIWKTLL 343



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 35/322 (10%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L+  Y + G L  AR+LFD+MP R++ +WN+++A   +SG  N E++  GF  F ++R
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGL-NEESL--GF--FFAMR 58

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                     L  L + C     V +   VH Y ++ GL  D  V  +L ++Y + G +R
Sbjct: 59  REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 118

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           + +     +   ++V     +    +NG  E     F  +  +G+  +  +    +   S
Sbjct: 119 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 178

Query: 272 DLGKRHE-EQVQAYAIK----------------------------LLLYNNNSNVVLWNK 302
           DL    + +Q+ A AIK                            + L  + +++VL + 
Sbjct: 179 DLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSA 238

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS- 361
            +S Y   G    A+  F  M+ +  + + VTFL  L A + +   + G        K+ 
Sbjct: 239 MISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY 298

Query: 362 GFYSAVIVGNSLINMYSKMGCV 383
           G   +V     ++++  + GC+
Sbjct: 299 GLQPSVKHYTCIVDLLGRSGCL 320



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L         +P  
Sbjct: 71  SLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSL 130

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
           +++S N+ ++    +G  +AE   E F L R       ++TF S +T       C     
Sbjct: 131 NIVSCNTTISGRTQNG--DAEGALEFFCLMRGAGVEANAVTFVSAVTS------CSDLAA 182

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +H  A+K G+     V  +LV++YS+ G + +++ +       D+VL   M+ A
Sbjct: 183 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 242

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +  +G  P++ +   +L   S  G + +E +  + +    Y   
Sbjct: 243 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLK-DEGMNCFELMTKTYGLQ 301

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G +    ++I S  VQ D V +   L+A       ++ ++
Sbjct: 302 PSV----KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAER 357

Query: 354 I 354
           I
Sbjct: 358 I 358


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 210/744 (28%), Positives = 351/744 (47%), Gaps = 78/744 (10%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A  L+ C     +   + +H   L+  L  D F+  +L+N+Y K G++ +A+ +FDGM  
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE--- 279
           RD+V W  M+ A+   G  ++   +F  +++ G+ P+  ++  VL   S  G  H +   
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACS--GGSHSKFTH 171

Query: 280 QVQAYAIKL----------------------------LLYNNNSNVVLWNKKLSGYLQVG 311
           QV    +KL                            LL     + V WN  L+GY + G
Sbjct: 172 QVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
           D    +     ++ S  +    T    L           GQ +H + +K G  +  ++ +
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNS 291

Query: 372 SLINMYSK-------------------------MGCV------------------CGLRT 388
            L+ MYS+                         + C                    G++ 
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP 351

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           + +    +   +S   +  +L + +H + +K+       V  A++++Y + G++ +A   
Sbjct: 352 NHYIFVGIAGVASRTGDA-NLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVT 410

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     D  +WN ++  +   +N  + L +F  M   G   ++ T  + ++ C  L+ L
Sbjct: 411 FDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNL 470

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           + G Q+HA  +KSG + D  VS  ++DMY + G    A  +F  +   D  +WT ++SG 
Sbjct: 471 RFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGY 530

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
               E +  +  +  M    + P + T A+ +   S + +L  G Q+H+  IK   +S  
Sbjct: 531 AKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV 590

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
             G +LVDMY KCGNI DA +LF + + R+ V WN ++ G +QHG+G + L  F+ M   
Sbjct: 591 VSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDE 649

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G  PD +TF+GVLSACS+ GL++E  + F  +   YGI P +EHY+ +VD L +AGR  E
Sbjct: 650 GKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVE 709

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A  LI  MP    +S+ R +LGACR+  + E  +  AE+L  LEP D+S+ +LLSNI+A 
Sbjct: 710 AESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYAD 769

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA 832
             +W DVT  R  +    VKK+P 
Sbjct: 770 LGRWSDVTRVRNILLDHGVKKEPG 793



 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 195/687 (28%), Positives = 321/687 (46%), Gaps = 97/687 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HAR+L S+  PD FL ++L+ MY +CG LV ARR+FD MP RD+++W ++++A+  
Sbjct: 69  GQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTA 128

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G+ +     +   +F  + +     +  TLA +LK C    +   +  VHG  +K+  +
Sbjct: 129 AGDSD-----QALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGL 183

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  +LV  Y+  G++  A+ +  G+ ER  V W  +L  YA +G    V  +   L
Sbjct: 184 DDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKL 243

Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNNN----SNVVLWNKKLSG 306
             SG      ++  VL    +LG  ++ + V A  IK  L  +N      V ++++ LS 
Sbjct: 244 VASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSA 303

Query: 307 ------YLQVG--------------DNHG----AIECFVNMIRSNVQYDSVTFLVALAAV 342
                 ++++               D H     A++ FV M    V+ +   F V +A V
Sbjct: 304 EEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIF-VGIAGV 362

Query: 343 AG-TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------------------- 381
           A  T + NL + +H   +KSGF     VG++++NMY K+G                    
Sbjct: 363 ASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSW 422

Query: 382 ------------CVCGLR-----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                       C  GLR            +++T  SVLR  +SL   L    Q+H   +
Sbjct: 423 NTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMN-LRFGTQVHACIL 481

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           K+    D+ VS  L+D+Y ++G    A  +FE     D  +W  ++ GY  +  + K +E
Sbjct: 482 KSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVE 541

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            F  M     R  + T+A ++  C  +  L  G Q+H++A+KSG+   + VS  ++DMYV
Sbjct: 542 YFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYV 600

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG + DA+ +F++    D VAW T+I G   +G    AL  + QM   G  PD  TF  
Sbjct: 601 KCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVG 660

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDAYIL 650
           ++ A S    L +GR+   +L           GI+        +VD+ +K G + +A  L
Sbjct: 661 VLSACSHAGLLNEGRKYFKSL-------SSIYGITPTMEHYACMVDILSKAGRLVEAESL 713

Query: 651 FKQMDMR-NTVLWNAMLVGLAQHGNGE 676
             QM +  ++ +W  +L     H N E
Sbjct: 714 INQMPLAPDSSIWRTILGACRIHRNIE 740



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 242/592 (40%), Gaps = 95/592 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+     S        H +++  + + D ++ ++L+  Y+ CG L  A  +   +P+R
Sbjct: 156 SVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPER 215

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             +SWN++L  YA  G+     +     +   L  S    S+ TL  +LK C+  G    
Sbjct: 216 SDVSWNALLNGYARHGDYRRVMI-----IIEKLVASGDEISKYTLPTVLKCCMELGLAKY 270

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            ++VH   +K GL  D  ++  LV +YS+     EA  +F  + E DVV    M+  +  
Sbjct: 271 GQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDR 330

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--LLLYNNN 294
           +    E   LFV +   G+ P+      + GV S  G  +    V AY +K    +    
Sbjct: 331 HDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGV 390

Query: 295 SNVVL--------------------------WNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            + +L                          WN  LS +    +    +  F  M     
Sbjct: 391 GDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGF 450

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC---VC- 384
             +  T++  L       NL  G Q+H   LKSG  +   V   L++MY++ GC    C 
Sbjct: 451 SANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACL 510

Query: 385 ---------------------------------------GLRTDQFTLA---SVLRASSS 402
                                                   +R    TLA   SV    +S
Sbjct: 511 VFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMAS 570

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L  GL    Q+H  AIK+   + S VS AL+D+Y + G++A+AE LF   +  D   WN 
Sbjct: 571 LGSGL----QLHSWAIKSGWNS-SVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNT 625

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----Y 517
           +I GY    + +KAL+ F  M   G+R D IT    + AC    +L +G++        Y
Sbjct: 626 IICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIY 685

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            +    E   C    ++D+  K G +V+A+S+ N +P APD   W T++  C
Sbjct: 686 GITPTMEHYAC----MVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGAC 733



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 149/287 (51%), Gaps = 5/287 (1%)

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S+ SH    L +  H    RL     A A++ C     L++G+++HA  ++S    D  +
Sbjct: 32  SSPSHANARLHTVAHAEELRLH----AAALQDCAVRRTLRRGQELHARLLRSALHPDTFL 87

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
              +L+MY KCG +VDA+ +F+ +P  D VAWT MIS     G+ D AL ++ +M   G+
Sbjct: 88  LDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGI 147

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+ FT A ++KA S  +  +   Q+H  ++KL+   DP+VG SLV+ Y  CG ++ A  
Sbjct: 148 APNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAET 207

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +   +  R+ V WNA+L G A+HG+    + + E + A G E    T   VL  C   GL
Sbjct: 208 VLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGL 267

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
                ++ H    K G+E +    S LV+   R    +EA E+ + +
Sbjct: 268 AKYG-QSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRI 313



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 120/239 (50%), Gaps = 8/239 (3%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F Q +    S++   + S+LR   S  +L  G   HA IL S    D  ++  L+ MY++
Sbjct: 442 FKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQ 501

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            G    A  +F+++ +RD  SW  I++ YA + E  AE V E FR    LRE+I   S  
Sbjct: 502 SGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEE--AEKVVEYFRSM--LRENIR-PSDA 556

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE-FVSGALVNIYSKFGKIREAKFLFDG 219
           TLA  L +C     + +   +H +A+K G  W+   VSGALV++Y K G I +A+ LF  
Sbjct: 557 TLAVSLSVCSDMASLGSGLQLHSWAIKSG--WNSSVVSGALVDMYVKCGNIADAEMLFHE 614

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            + RD V W  ++  Y+++G G +    F  +   G  PD  +   VL   S  G  +E
Sbjct: 615 SETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNE 673


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 190/532 (35%), Positives = 289/532 (54%), Gaps = 46/532 (8%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI  Y +NG +  A  LF+     ++ATWNAM+ G   S  + ++L  F  M   G + D
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E  + +  + C  L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + D ++   
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P+ + V+  T ISG   NG+ + AL  +  MR +GV  +  TF   V + S L AL Q
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA  IK        V  SLV MY++CG + D+  +  +    + VL +AM+     
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 353

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG+G++ + LF+ M A G EP+ VTF+ +L ACS++GL  E    F LM + YG++P V+
Sbjct: 354 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 413

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGR+G   EA +LILSMP +    + + LL AC+ Q   +  + +AE+++ L
Sbjct: 414 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 473

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
           +P DS++YVLLSNI A +++W+DV+  R  M+ +NV+K+P                    
Sbjct: 474 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 533

Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 I   +E ++ RI++ GY PD   V  D+E+EEKE +L +HSEKLA A+  +S P
Sbjct: 534 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 593

Query: 889 P-----------------------SSVILSNKEPLYANRFHHLRDGMCPCAD 917
                                   S VI         +RFHH +DG C C D
Sbjct: 594 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGD 645



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 174/375 (46%), Gaps = 34/375 (9%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV+ WN  + GY++ GD   A + F  M   NV   +       A VAG  N  L ++  
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWN-------AMVAGLTNSGLNEE-- 157

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                 GF+ A+           + G    ++ D++ L S+ R  + L + +   +Q+H 
Sbjct: 158 ----SLGFFFAM----------RREG----MQPDEYGLGSLFRCCAGLRDVVS-GRQVHA 198

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           + +++    D  V ++L  +Y R G + + E         ++ + N  I G   + ++  
Sbjct: 199 YVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEG 258

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           ALE F  M  +G   + +T  +AV +C  L  L QG+Q+HA A+K+G +  + V + ++ 
Sbjct: 259 ALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVH 318

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY +CG + D++ +  +    D V  + MIS    +G    A+ ++ QM  +G  P+E T
Sbjct: 319 MYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVT 378

Query: 596 FAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           F  L+ A S     ++G      + K   L  S   +  I  VD+  + G + +A  L  
Sbjct: 379 FLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCI--VDLLGRSGCLNEAEDLIL 436

Query: 653 QMDMR-NTVLWNAML 666
            M ++ + V+W  +L
Sbjct: 437 SMPVQPDGVIWKTLL 451



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 143/371 (38%), Gaps = 56/371 (15%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L L +  HA    S    DRF  N+L+  Y+  G    AR LF+++P R+++SWN ++  
Sbjct: 58  LPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGG 117

Query: 129 YAHSG----------EGNAENVT----------------EGFRLFRSLRESITFTSRLTL 162
           Y  +G          E  A NV                 E    F ++R          L
Sbjct: 118 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 177

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             L + C     V +   VH Y ++ GL  D  V  +L ++Y + G +R+ +     +  
Sbjct: 178 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 237

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQV 281
            ++V     +    +NG  E     F  +  +G+  +  +    +   SDL    + +Q+
Sbjct: 238 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 297

Query: 282 QAYAIK----------------------------LLLYNNNSNVVLWNKKLSGYLQVGDN 313
            A AIK                            + L  + +++VL +  +S Y   G  
Sbjct: 298 HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHG 357

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS-GFYSAVIVGNS 372
             A+  F  M+ +  + + VTFL  L A + +   + G        K+ G   +V     
Sbjct: 358 QKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTC 417

Query: 373 LINMYSKMGCV 383
           ++++  + GC+
Sbjct: 418 IVDLLGRSGCL 428



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L         +P  
Sbjct: 179 SLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSL 238

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
           +++S N+ ++    +G  +AE   E F L R       ++TF S +T       C     
Sbjct: 239 NIVSCNTTISGRTQNG--DAEGALEFFCLMRGAGVEANAVTFVSAVTS------CSDLAA 290

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +H  A+K G+     V  +LV++YS+ G + +++ +       D+VL   M+ A
Sbjct: 291 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 350

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +  +G  P++ +   +L   S  G + +E +  + +    Y   
Sbjct: 351 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLK-DEGMNCFELMTKTYGLQ 409

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G +    ++I S  VQ D V +   L+A       ++ ++
Sbjct: 410 PSV----KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAER 465

Query: 354 I 354
           I
Sbjct: 466 I 466



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)

Query: 571 NGEEDL--------ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           NG ED+             H+    G+  +   F+ + +A   L  L   RQ+HA     
Sbjct: 15  NGREDIIRLCSTGRVKEALHRRFREGLWSEPGLFSHIFRACQALPLL---RQLHAFAATS 71

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             ++D F    L+  YA  G+   A  LF+++  RN + WN ++ G  ++G+ E   KLF
Sbjct: 72  GAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLF 131

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           ++M A  V     T+  +++  + +GL  E+   F  MR + G++P+
Sbjct: 132 DEMPARNV----ATWNAMVAGLTNSGLNEESLGFFFAMR-REGMQPD 173


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 299/553 (54%), Gaps = 46/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQ+H        + D  V+  L+ +  ++  +  A  LF   +  D  +W+ MI G++ +
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  +  + F  +  +G + D  ++   +KAC   + L  G+ +H+  +K+G  LD  V 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S ++DMY KCG + +A+ +F+ +P  D V  T MI+G  + G+ + +  ++ QMR  G V
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+     +V A + L A+ + R +H  +     S D  +G +++DMYAKCG+I+ +  +
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M+ +N + W+AM+     HG G E L+LF  M   G+ P+ +TFI +L ACS+ GLV
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            +  + F LM   YG+ P+V+HY+ +VD LGRAGR  +A  LI +M  E    +  A LG
Sbjct: 320 DDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLG 379

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR+    +  +  A+ L++L+  +   Y+LLSNI+A A +W DV   R  M ++ +KK 
Sbjct: 380 ACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKI 439

Query: 831 P-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                       ++ I+  ++ L ++++  GYVPDT+ VL DV+EE K
Sbjct: 440 PGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVK 499

Query: 868 ERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANR 904
              L+ HSEKLA A+GLI+TP  + I                     ++ ++ +   ANR
Sbjct: 500 LGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANR 559

Query: 905 FHHLRDGMCPCAD 917
           FHH ++G+C C D
Sbjct: 560 FHHFKEGICSCGD 572



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 138/263 (52%), Gaps = 4/263 (1%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           Q KQ+HA    +G   DL V++ +L M  K   +V A  +FN +   D V+W+ MI G V
Sbjct: 18  QIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFV 77

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG+ +     + ++  +G  PD F+   ++KA      L  GR IH+ ++K     D F
Sbjct: 78  KNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNF 137

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           V  +LVDMYAKCG I++A  LF +M  ++ V    M+ G A+ G   E+  LF+ M+  G
Sbjct: 138 VCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDG 197

Query: 690 VEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
             PD V  + +++AC+  G +++A   + ++   +Y +  +VE  + ++D   + G    
Sbjct: 198 FVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL--DVELGTAMIDMYAKCGSIDS 255

Query: 749 AGELILSMPFEASASMHRALLGA 771
           + E+   M  +   S   A++GA
Sbjct: 256 SREIFDRMEQKNVISW-SAMIGA 277



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 34/311 (10%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA++  +  I D  + N L+ M ++   LV A  LF+KM +RD +SW+ ++  +  +
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+         F+ FR L  + +     +L  ++K C  +  +     +H   LK GL  
Sbjct: 80  GD-----YERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHL 134

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D FV   LV++Y+K G I  AK LFD M ++D+V   VM+  YAE G   E + LF  + 
Sbjct: 135 DNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMR 194

Query: 253 RSGLCPDDESVQCVLGVISDLG--------------KRHEEQVQAYAIKLLLYNN----- 293
           R G  PD  ++  ++   + LG              +R+   V+     + +Y       
Sbjct: 195 RDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSID 254

Query: 294 ----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       NV+ W+  +  Y   G    A+E F  M+ S +  + +TF+  L A +
Sbjct: 255 SSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACS 314

Query: 344 GTDNLNLGQQI 354
               ++ G Q+
Sbjct: 315 HAGLVDDGLQL 325



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 128/261 (49%), Gaps = 18/261 (6%)

Query: 12  RHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSS----------SSSSSQWFS--- 58
           +HK        F K   R+  S+S+ +  F++   +            + S    FS   
Sbjct: 47  KHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPF 106

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++    T  L++G+  H+ +L +    D F+ + L+ MY++CG +  A++LFD+MP +D
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKD 166

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L++   ++A YA  G+ N     E + LF  +R       ++ +  ++  C   G +  +
Sbjct: 167 LVTRTVMIAGYAECGKPN-----ESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKA 221

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             VH Y        D  +  A++++Y+K G I  ++ +FD M++++V+ W  M+ AY  +
Sbjct: 222 RLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYH 281

Query: 239 GFGEEVFHLFVDLHRSGLCPD 259
           G G E   LF  +  SG+ P+
Sbjct: 282 GQGREALELFHMMLNSGIIPN 302



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 176/406 (43%), Gaps = 34/406 (8%)

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           ++  + VH      G++ D  V+  L+ + +K   +  A  LF+ M+ERD V W VM+  
Sbjct: 16  IFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGG 75

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNN 293
           + +NG  E  F  F +L R+G  PD+ S+  V+    D +G      + +  +K  L+ +
Sbjct: 76  FVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLD 135

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N    + +  +  Y + G    A + F  M +     D VT  V +A  A     N    
Sbjct: 136 N---FVCSTLVDMYAKCGMIDNAKQLFDRMPKK----DLVTRTVMIAGYAECGKPNESWV 188

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           +     + GF    +   +++N  +K+G                         ++ ++ +
Sbjct: 189 LFDQMRRDGFVPDKVAMVTIVNACAKLG------------------------AMNKARLV 224

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H +        D  + TA+ID+Y + GS+  +  +F+  +  ++ +W+AMI  Y      
Sbjct: 225 HDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQG 284

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-YAMKSGFELDLCVSSG 532
            +ALELF  M  SG   + IT  + + AC    ++  G Q+ +  ++  G   D+   + 
Sbjct: 285 REALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTC 344

Query: 533 ILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           ++D+  + G +  A  +  ++    D+  W   +  C  + + DLA
Sbjct: 345 MVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLA 390


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/675 (32%), Positives = 348/675 (51%), Gaps = 37/675 (5%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +LKLC  S  +     VHG   K+G   D +V   L+ +Y   G + +A+ LFD M
Sbjct: 12  TFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEM 71

Query: 221 QERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHE 278
            ERDVV W  ++   + NG + E   + F  + RS + P+  SV  +L + + L  +   
Sbjct: 72  PERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMT 131

Query: 279 EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLV 337
            ++  Y++K+ L   +S V   N  +  Y + G      + F   +  N V ++S+    
Sbjct: 132 RRIHCYSVKVGL---DSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSI---- 184

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
                           I+G   K   + A+     +I+         G + +  T++S+L
Sbjct: 185 ----------------INGLACKGRCWDALNAFRMMID--------AGAQPNSVTISSIL 220

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                L E     K+IH  +++  T  D F++ +LID+Y ++G   EA  +F N D  ++
Sbjct: 221 PVLVEL-ECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNI 279

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WNAMI  Y L+    +A+     M  +GE  + +T    + AC  L  L  GK++HA 
Sbjct: 280 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAM 339

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
            ++ G   DL VS+ ++DMY KCG +  A+++FN     D+V++  +I G  +  +   +
Sbjct: 340 GVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQS 398

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L+++ +MRL G  PD  +F  ++ A + L AL+QG+++H   ++    S  FV  SL+D 
Sbjct: 399 LNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDF 458

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y KCG I+ A  LF Q+  ++   WN M++G    G  E  + +FE M+   V+ D V++
Sbjct: 459 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 518

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           I VLSACS+ GLV   ++ F  M  +  +EP   HY+ +VD LGRAG  +EA +LI  +P
Sbjct: 519 IAVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP 577

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
               A++  ALLGACR+ G+ E G+  AE L  L+P     Y+LLSNI+A   +WD+   
Sbjct: 578 IAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANK 637

Query: 818 ARGEMKRKNVKKDPA 832
            R  MK +  KK+P 
Sbjct: 638 IRELMKSRGAKKNPG 652



 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 243/509 (47%), Gaps = 60/509 (11%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG- 381
           M+R  VQ D  TF   L   + + ++  G ++HG   K GF + V VGN+L+ +Y   G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 382 --------------------CVCGL-----------------------RTDQFTLASVLR 398
                                + GL                       + +  ++ S+L 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
            S++L E   ++++IH +++K    +      AL+D Y + GS+     +F      +  
Sbjct: 121 ISAAL-EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEV 179

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           +WN++I G         AL  F  M  +G + + +TI++ +     L   K GK++H ++
Sbjct: 180 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 239

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           M+ G E D+ +++ ++DMY K G   +A +IF+++   + V+W  MI+    N     A+
Sbjct: 240 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAI 299

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
               QM+ +G  P+  TF  ++ A + L  L  G++IHA  +++  +SD FV  SL+DMY
Sbjct: 300 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMY 359

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG +  A  +F     ++ V +N +++G ++  +  ++L LF +M+  G +PD V+F+
Sbjct: 360 AKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV 418

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF------LVDALGRAGRTKEAGEL 752
           GV+SAC+    + +        +E +G+      YS       L+D   + GR   A  L
Sbjct: 419 GVISACANLAALKQG-------KEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 471

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETG 781
              + F+  AS +  +LG   + G+ ET 
Sbjct: 472 FNQILFKDVASWNTMILGYGMI-GELETA 499



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/592 (22%), Positives = 252/592 (42%), Gaps = 79/592 (13%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+    + D+  G   H  +       D ++ N L+ +Y  CG L  ARRLFD+MP+RD
Sbjct: 16  VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERD 75

Query: 119 LISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++SWN+I+   + +G+   A N       F  +  S+   + +++  LL +  +      
Sbjct: 76  VVSWNTIIGLLSVNGDYTEARNY-----YFWMILRSVIKPNLVSVISLLPISAALEDEEM 130

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           +  +H Y++K+GL        ALV+ Y K G ++    +F+   E++ V W  ++   A 
Sbjct: 131 TRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLAC 190

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-------- 288
            G   +  + F  +  +G  P+  ++  +L V+ +L   +  +++  +++++        
Sbjct: 191 KGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFI 250

Query: 289 -------------------LLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                              + +N +  N+V WN  ++ Y        AI   + M  +  
Sbjct: 251 ANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGE 310

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC------ 382
             ++VTF   L A A    L  G++IH   ++ G  S + V NSLI+MY+K GC      
Sbjct: 311 CPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARN 370

Query: 383 ------------------------------------VCGLRTDQFTLASVLRASSSLPEG 406
                                               + G + D  +   V+ A ++L   
Sbjct: 371 VFNTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLA-A 429

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L   K++H  A++N   +  FVS +L+D Y + G +  A  LF      D+A+WN MI G
Sbjct: 430 LKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILG 489

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           Y +      A+ +F  M     + D ++    + AC    ++++G Q  +  +    E  
Sbjct: 490 YGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPT 549

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
               + ++D+  + G + +A  +   +P APD   W  ++  C   G  +L 
Sbjct: 550 EMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELG 601


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 194/579 (33%), Positives = 305/579 (52%), Gaps = 52/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D  T + +++   S    +H    I  H   N      F+   LI++Y +   + +
Sbjct: 56  GLWADSATYSELIKCCIS-NRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ +W  MI  Y       KALEL   M     R +  T ++ +++C  
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN- 173

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
              +   + +H   +K G E D+ V S ++D++ K G   DA S+F+++   D + W ++
Sbjct: 174 --GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   N   D+AL ++ +M+ +G + ++ T   +++A + L  LE G Q H +++K D 
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 290

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             D  +  +LVDMY KCG++EDA  +F QM  R+ + W+ M+ GLAQ+G  +E LKLFE 
Sbjct: 291 -QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           MK+ G +P+ +T +GVL ACS+ GL+ + +  F  M++ YGI+P  EHY  ++D LG+AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           +  +A +L+  M  E  A   R LLGACRVQ +    ++ A+K++AL+P D+  Y LLSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFA----------------KVEG 841
           I+A + +WD V   R  M+ + +KK+P          I A                K+  
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY 901
           LI R+   GYVP+T+FVL D+E E+ E +L +HSEKLA A+GL++ P   VI   K    
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRI 589

Query: 902 AN-----------------------RFHHLRDGMCPCAD 917
                                    R+HH +DG C C D
Sbjct: 590 CGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGD 628



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 172/388 (44%), Gaps = 48/388 (12%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A++    + + G   D  T +  +K C     + +G  +  +   +G    + + + ++
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +MYVK   + DA  +F+ +P  + ++WTTMIS          AL +   M    V P+ +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T++ +++  SC   +   R +H  +IK    SD FV  +L+D++AK G  EDA  +F +M
Sbjct: 164 TYSSVLR--SC-NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS--------- 705
              + ++WN+++ G AQ+   +  L+LF+ MK  G   +  T   VL AC+         
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 706 ------------------------YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
                                     G + +A   F+ M+E+     +V  +S ++  L 
Sbjct: 281 QAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-----DVITWSTMISGLA 335

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWV---AEKLMALEPFD 795
           + G ++EA +L   M    +   +  ++G   AC   G  E G +     +KL  ++P  
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV- 394

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMK 823
              Y  + ++   A + DD      EM+
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEME 422



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 199/493 (40%), Gaps = 96/493 (19%)

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            ++    +   SL+    +    T + L+K C+S+  V     +  +    G     F+ 
Sbjct: 40  RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+N+Y KF  + +A  LFD M +R+V+ W  M+ AY++    ++   L V + R  + 
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 258 PDDESVQCVL--------------GVISDLGKRHEEQVQAYAIKLL-----------LYN 292
           P+  +   VL              G+I + G   +  V++  I +            +++
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFD 218

Query: 293 N--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                + ++WN  + G+ Q   +  A+E F  M R+    +  T    L A  G   L L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           G Q H   +K  +   +I+ N+L++MY    C CG      +L   LR  + + E     
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMY----CKCG------SLEDALRVFNQMKER---- 322

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
                                                        D+ TW+ MI G   +
Sbjct: 323 ---------------------------------------------DVITWSTMISGLAQN 337

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             S +AL+LF  M +SG + + ITI   + AC    +L+ G   +  +MK  + +D    
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVRE 396

Query: 531 --SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
               ++D+  K G + DA  + N++   PD V W T++  C    + ++ L+ Y   ++ 
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC--RVQRNMVLAEYAAKKVI 454

Query: 588 GVVP-DEFTFAIL 599
            + P D  T+ +L
Sbjct: 455 ALDPEDAGTYTLL 467



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 50/375 (13%)

Query: 18  VIFSSFTKDTY-RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           ++ S FT+  Y R+LP  ++  +  LQ     + S++  +  +++  IS   +  G    
Sbjct: 28  LLLSEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSAT--YSELIKCCISNRAVHEGNLIC 84

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
             +  +   P  FL N L+ MY +   L  A +LFD+MP R++ISW ++++AY+      
Sbjct: 85  RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC--KI 142

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
            +   E   L   LR+++   +  T + +L+ C     V     +H   +K GL  D FV
Sbjct: 143 HQKALELLVLM--LRDNVR-PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFV 196

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
             AL+++++K G+  +A  +FD M   D ++W  ++  +A+N   +    LF  + R+G 
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256

Query: 257 CPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYN------------------- 292
             +  ++  VL   +     +LG +    +  Y   L+L N                   
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316

Query: 293 ---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 +V+ W+  +SG  Q G +  A++ F  M  S  + + +T +  L A +      
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS------ 370

Query: 350 LGQQIHGTTLKSGFY 364
                H   L+ G+Y
Sbjct: 371 -----HAGLLEDGWY 380


>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 182/476 (38%), Positives = 275/476 (57%), Gaps = 47/476 (9%)

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           R DE+T+ + V AC  L  L++GK +H+Y+ + G + +L V++ ILDMY KC  +  AQ 
Sbjct: 8   RPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQE 67

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +FN I   D ++WT+M+SG   +G    +L+++ +M+L  + PDE T   ++ A +   A
Sbjct: 68  VFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGA 127

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L+QG+ IH  + K + + D  +  +LVDMYAKCG+I+ A  +F++M +RN   WNAM+ G
Sbjct: 128 LDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGG 187

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
           LA HG+GE+ + LF+ M+   + PD VTFI +L ACS+ GLV E    F  M+ K+ IEP
Sbjct: 188 LAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 247

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
            +EHY  +VD L RA +  +A   I +MP +A++ +   LLGACR  G  +  + +  ++
Sbjct: 248 RMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRV 307

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------- 832
           + LEP     YV+LSN++A  +QWD     R +MK K ++K P                 
Sbjct: 308 IELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAG 367

Query: 833 -------DLIFAKVEGLIKRIK-EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  + I+A +E + +R+  +GG+VP T  VL D+EEEEKE +L+ HSEKLA A GL
Sbjct: 368 DRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGL 427

Query: 885 ISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           ISTP  S I                     + N+E +  +  RFHH ++G C C D
Sbjct: 428 ISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMD 483



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 151/313 (48%), Gaps = 9/313 (2%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           LR D+ T+ S++ A + L   L   K +H ++ +     +  V+ A++D+YC+   +  A
Sbjct: 7   LRPDEVTMVSLVPACAQLG-NLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESA 65

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
           + +F      D+ +W +M+ G   S    ++L LF  M       DEIT+   + AC   
Sbjct: 66  QEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQT 125

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L QGK +H    K     DL + + ++DMY KCG++  A  +F  +   +   W  MI
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKL 622
            G   +G  + A+S++ QM    ++PD+ TF  L+ A S    +++G    Q   N  ++
Sbjct: 186 GGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQI 245

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKL 681
           +   + +  +  VD+  +   ++DA    + M ++ N+VLW  +L      G+ +   K+
Sbjct: 246 EPRMEHYGCV--VDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKI 303

Query: 682 FEDMKAHGVEPDS 694
               +   +EPDS
Sbjct: 304 XR--RVIELEPDS 314



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 1/160 (0%)

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           +L  + PDE T   LV A + L  LE+G+ +H+   +L    +  V  +++DMY KC +I
Sbjct: 3   KLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDI 62

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           E A  +F ++  ++ + W +ML GLA+ G  +E+L LF  M+ H +EPD +T +GVLSAC
Sbjct: 63  ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSAC 122

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           + TG + +  +  HL+ +K+ I  ++   + LVD   + G
Sbjct: 123 AQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCG 161



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 5/185 (2%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N ++ MY +C  +  A+ +F+++ ++D++SW S+L+  A SG        E   LFR 
Sbjct: 48  VNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG-----YFQESLALFRK 102

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++        +TL  +L  C  +G +   + +H    K  +  D  +  ALV++Y+K G 
Sbjct: 103 MQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGS 162

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           I  A  +F  M+ R+V  W  M+   A +G GE+   LF  +    L PDD +   +L  
Sbjct: 163 IDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCA 222

Query: 270 ISDLG 274
            S  G
Sbjct: 223 CSHAG 227



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           +T+  L+  C   G +   + +H Y+ ++GL  +  V+ A++++Y K   I  A+ +F+ 
Sbjct: 12  VTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVFNR 71

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           ++E+DV+ W  ML   A++G+ +E   LF  +    + PD+ ++  VL   +  G   + 
Sbjct: 72  IREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQG 131

Query: 280 Q---------------------VQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQV 310
           +                     V  Y        A+++       NV  WN  + G    
Sbjct: 132 KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMH 191

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           G    AI  F  M    +  D VTF+  L A +
Sbjct: 192 GHGEDAISLFDQMEXDKLMPDDVTFIALLCACS 224



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 116/300 (38%), Gaps = 65/300 (21%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V+ W   LSG  + G    ++  F  M    ++ D +T +  L+A A T  L+ G+ IH
Sbjct: 76  DVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIH 135

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
               K      +++  +L++MY+K G                    S+   L + +++ V
Sbjct: 136 LLIDKFEINCDLVLETALVDMYAKCG--------------------SIDLALQVFRRMRV 175

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             +        F   A+I      G +A                         +  +   
Sbjct: 176 RNV--------FTWNAMI------GGLA-------------------------MHGHGED 196

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGI 533
           A+ LF  M       D++T    + AC    ++ +G  M   AMK+ F+++  +     +
Sbjct: 197 AISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCV 255

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +D+  +   + DA +   ++P   + V W T++  C   G  DLA  I    R+  + PD
Sbjct: 256 VDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXR--RVIELEPD 313


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/709 (30%), Positives = 347/709 (48%), Gaps = 95/709 (13%)

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  ++G+L+   +      F  M   +++ +S T + AL A     +  +G +I    ++
Sbjct: 114 NAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVR 173

Query: 361 SGFYSAVIVGNSLINMYSKMG----------------CVC-------------------- 384
            GF+  + VG+S++N   K G                 VC                    
Sbjct: 174 RGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQM 233

Query: 385 -------GLRTDQFTLASVLRASSSLPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVY 436
                  GLR    T+A++L+A      GL  +    H + +      D FV T+L+D+Y
Sbjct: 234 FLEMIGGGLRPSPVTMANLLKACGQ--SGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMY 291

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
              G    A  +F++     L +WNAMI GY+ +    ++  LF  +  SG   D  T+ 
Sbjct: 292 SNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLV 351

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + ++ C     L+ G+ +H+  ++   E  L +S+ I+DMY KCGA+  A  +F  +   
Sbjct: 352 SLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKK 411

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + + WT M+ G   NG  + AL ++ QM+   V  +  T   LV   + L +L +GR +H
Sbjct: 412 NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVH 471

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK-QMDMRNTVLWNAMLVGLAQHGNG 675
           A+ I+   + D  +  +L+DMYAKCG I  A  LF  +  +++ +L N+M++G   HG+G
Sbjct: 472 AHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHG 531

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
              L ++  M    ++P+  TF+ +L+ACS++GLV E    FH M   + + P+ +HY+ 
Sbjct: 532 RYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYAC 591

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           LVD   RAGR +EA EL+  MPF+ S  +  ALL  CR   +T  G  +A++L++L+  +
Sbjct: 592 LVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLN 651

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------------ 831
           S  YV+LSNI+A A +W+ V   RG M+ + +KK P                        
Sbjct: 652 SGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSW 711

Query: 832 ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
           AD I+  +E L   ++  GY+PDT  VL DV E  K + L+ HSE+LA A+GL+STP  S
Sbjct: 712 AD-IYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGS 770

Query: 892 VI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +I                     +  +E +   ANRFHH  +G C C D
Sbjct: 771 LIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCND 819



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 166/339 (48%), Gaps = 1/339 (0%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K IH   IKN    +SF++  LI VY   G +  A  +F+     + A  NAMI G++ +
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +   LF  M +    ++  T   A+KAC  LL  + G ++   A++ GF L L V 
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +++  VK G + DAQ +F+ +P  D V W ++I G V  G    ++ ++ +M   G+ 
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P   T A L+KA       + G   H+ ++ L   +D FV  SLVDMY+  G+   A ++
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  R+ + WNAM+ G  Q+G   E+  LF  +   G   DS T + ++  CS T  +
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            E     H    +  +E  +   + +VD   + G  K+A
Sbjct: 364 -ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQA 401



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 133/615 (21%), Positives = 261/615 (42%), Gaps = 82/615 (13%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F+   H    + +   FS L H  S + L+  KS HA+I+ +    + FL   L+ +YS 
Sbjct: 33  FVSVHHAPFFNQAPSVFSSLLHQFSNT-LIHVKSIHAQIIKNWVSTESFLAAKLIRVYSD 91

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
            G L +AR +FD+    +    N+++A +  +     +   E  RLFR +       +  
Sbjct: 92  LGFLGHARNVFDQCSLPETAVCNAMIAGFLRN-----QQHMEVPRLFRMMGSCDIEINSY 146

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T    LK C           +   A++ G     +V  ++VN   K G + +A+ +FDGM
Sbjct: 147 TCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGM 206

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEE 279
            E+DVV W  ++  Y + G   E   +F+++   GL P   ++  +L      G K+   
Sbjct: 207 PEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGM 266

Query: 280 QVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVG 311
              +Y + L + N+                            + +++ WN  +SGY+Q G
Sbjct: 267 CAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNG 326

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               +   F  +++S   +DS T +  +   + T +L  G+ +H   ++    S +++  
Sbjct: 327 MIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLST 386

Query: 372 SLINMYSKMGCV--------------------------------------CGLRTDQ--- 390
           ++++MYSK G +                                      C ++ ++   
Sbjct: 387 AIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAA 446

Query: 391 --FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
              TL S++   + L   L   + +H H I++    D+ +++ALID+Y + G +  AE L
Sbjct: 447 NSVTLVSLVHCCAHLGS-LTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKL 505

Query: 449 FENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           F N+    D+   N+MI GY +  +   AL ++S M     + ++ T  + + AC    +
Sbjct: 506 FNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGL 565

Query: 508 LKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
           +++GK + H+              + ++D++ + G + +A  +   +P  P       ++
Sbjct: 566 VEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALL 625

Query: 566 SGCVDNGEEDLALSI 580
           SGC  +   ++ + I
Sbjct: 626 SGCRTHKNTNMGIQI 640


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 212/667 (31%), Positives = 338/667 (50%), Gaps = 76/667 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV LWN  +S Y ++GD   +I  F  M+   ++          +A    D L     I 
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE-----SAFELFDKLCDRDVIS 218

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             ++ SG+ S  +    L  +Y +M  + G+  D  T+ SVL   ++    L L K +H 
Sbjct: 219 WNSMISGYVSNGLTERGL-GIYKQMMYL-GIDVDLATIISVLVGCAN-SGTLSLGKAVHS 275

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            AIK+        S  L+D+Y + G +  A  +FE     ++ +W +MI GY     S  
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A++L   M   G +LD + I + + AC     L  GK +H Y   +  E +L V + ++D
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG+M  A S+F+ +   D ++W TMI      GE               + PD  T
Sbjct: 396 MYAKCGSMEAANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRT 434

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A + L+ALE+G++IH  +++   SSD  V  +LVD+Y KCG +  A +LF  + 
Sbjct: 435 MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V W  M+ G   HG G E +  F +M+  G+EPD V+FI +L ACS++GL+ + + 
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F++M+  + IEP++EHY+ +VD L R G   +A E + ++P    A++  ALL  CR  
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNY 614

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            D E  + VAE++  LEP ++  YVLL+NI+A A +W++V   R ++ ++ ++K+P    
Sbjct: 615 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSW 674

Query: 833 -------DLIFA----------KVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERAL 871
                  +L  +           +E L+K    ++KE G+ P T + L++ +E +KE AL
Sbjct: 675 IEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMAL 734

Query: 872 YYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHL 908
             HSEKLA A+GL++ PP   I   K                           +NRFHH 
Sbjct: 735 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 794

Query: 909 RDGMCPC 915
           +DG C C
Sbjct: 795 KDGYCSC 801



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 162/615 (26%), Positives = 281/615 (45%), Gaps = 103/615 (16%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L+LC         + VH       +  D  +   LV+ Y+  G ++E + +FD M
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           ++++V LW  M+  YA+ G  +E   LF  +   G+                 GKR E  
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI----------------EGKRPES- 203

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
               A +L     + +V+ WN  +SGY+  G     +  +  M+   +  D  T +  L 
Sbjct: 204 ----AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------- 384
             A +  L+LG+ +H   +KS F   +   N+L++MYSK G +                 
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319

Query: 385 ---------------------------GLRTDQFTLASVLRA---SSSLPEGLHLSKQIH 414
                                      G++ D   + S+L A   S SL  G    K +H
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG----KDVH 375

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
            +   N+  ++ FV  AL+D+Y + GSM  A  +F      D+ +WN MI          
Sbjct: 376 DYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------- 425

Query: 475 KALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
                       GE + D  T+A  + AC  L  L++GK++H Y +++G+  D  V++ +
Sbjct: 426 ------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +D+YVKCG +  A+ +F+ IP+ D V+WT MI+G   +G  + A++ +++MR +G+ PDE
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILF 651
            +F  ++ A S    LEQG +    ++K D + +P +     +VD+ ++ GN+  AY   
Sbjct: 534 VSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFM 592

Query: 652 KQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           + + +  +  +W A+L G   + + E   K+ E  +   +EP++  +  VL A  Y    
Sbjct: 593 ETLPIAPDATIWGALLCGCRNYHDIELAEKVAE--RVFELEPENTGYY-VLLANIYAE-- 647

Query: 711 SEAYENFHLMREKYG 725
           +E +E    +REK G
Sbjct: 648 AEKWEEVKRLREKIG 662



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 144/630 (22%), Positives = 250/630 (39%), Gaps = 137/630 (21%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ L+   QKS   + +    + S+L+          GK  H+ I ++S   D  L   L
Sbjct: 85  AMELICMCQKSELETKT----YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKL 140

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN---------AENVTEG-- 143
           ++ Y+ CG L   RR+FD M  +++  WN +++ YA  G+            E   EG  
Sbjct: 141 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 144 ----FRLFRSL--RESITFTSRL-----------------------------TLAPLLKL 168
               F LF  L  R+ I++ S +                             T+  +L  
Sbjct: 201 PESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C +SG +   + VH  A+K         S  L+++YSK G +  A  +F+ M ER+VV W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQA 283
             M+  Y  +G  +    L   + + G+  D  ++  +L   +     D GK   + ++A
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV----------QYDSV 333
                   N  SN+ + N  +  Y + G    A   F  M+  ++          + DS 
Sbjct: 381 -------NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSR 433

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
           T    L A A    L  G++IHG  L++G+ S   V N+L+++Y K G V GL    F +
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG-VLGLARLLFDM 492

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
                    +P                    D    T +I  Y  +G   EA        
Sbjct: 493 ---------IPS------------------KDLVSWTVMIAGYGMHGYGNEA-------- 517

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
              +AT+N                     M  +G   DE++  + + AC    +L+QG +
Sbjct: 518 ---IATFN--------------------EMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 514 MHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
              Y MK+ F ++  +   + ++D+  + G +  A      +P APD   W  ++ GC +
Sbjct: 555 FF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRN 613

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             + +LA  +    R+  + P+   + +L+
Sbjct: 614 YHDIELAEKVAE--RVFELEPENTGYYVLL 641



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 141/348 (40%), Gaps = 54/348 (15%)

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           +NA I  +    +   A+EL      S   L+  T  + ++ C  L     GK++H+   
Sbjct: 69  YNAKILHFCQLGDLENAMELICMCQKS--ELETKTYGSVLQLCAGLKSFTDGKKVHSIIK 126

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP----------------------- 556
            +   +D  +   ++  Y  CG + + + +F+ +                          
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 557 ----------------------------DDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                                       D ++W +MISG V NG  +  L IY QM   G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           +  D  T   ++   +    L  G+ +H+  IK           +L+DMY+KCG+++ A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M  RN V W +M+ G  + G  +  +KL + M+  GV+ D V    +L AC+ +G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            +    ++ H   +   +E  +   + L+D   + G  + A  +  +M
Sbjct: 367 SLDNG-KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 199/580 (34%), Positives = 306/580 (52%), Gaps = 58/580 (10%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           T +  ++++L A +S P  +   ++IH    K+    D F+   L+  Y + G   +A  
Sbjct: 37  TPEAIVSALLIAVNSCPS-ISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALK 95

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCLL 506
           LF++    DL +WN++I G+  S   H +L  F  M      + +E+TI + + AC    
Sbjct: 96  LFDDMPHKDLVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSG-- 151

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L  GK +H + +K G  L++ V++ +++MY K G +  A  +F  IP P+ V+W ++I+
Sbjct: 152 ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
             V NG     +  +++MR  G+  DE T   L++A   L   +    IH  +      +
Sbjct: 212 AQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGA 271

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
              +  +L+D YAK G +  +Y +F ++   + V W AML G A HG G E +KLFE M 
Sbjct: 272 KITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMA 331

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+EPD VTF  +LSACS++GLV+E    F++M E YGIEP V+HYS +VD LGR G  
Sbjct: 332 NKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLL 391

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            +A E+I +MP E +A +  ALLGACRV G+ E GK VAE L+ +EP D   Y++LSN++
Sbjct: 392 NDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMY 451

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLI 843
           +A+  W D    R  +K + +K+ P                        + I++K+E L+
Sbjct: 452 SASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELL 511

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK------ 897
            +I++ GY   T++VL DVEEE KE  +  HSEKLA A+GL+ +     ++  K      
Sbjct: 512 GKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICG 571

Query: 898 --------------------EPLYANRFHHLRDGMCPCAD 917
                               +P    RFHH  DG C CAD
Sbjct: 572 DCHSTAKLISLIEKRTIIIRDP---KRFHHFSDGFCSCAD 608



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 46/333 (13%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HAR+  S    D F+ + L+T Y++ G    A +LFD MP +DL+SWNS+++ ++  
Sbjct: 59  REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC 118

Query: 133 GEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                  +      F +++  ++   + +T+  ++  C  SG + A + +HG+ +K+G  
Sbjct: 119 -------LHMSLTAFYTMKFEMSVKPNEVTILSMISAC--SGALDAGKYIHGFGIKVGGT 169

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V+ +L+N+Y K G +  A  LF+ + + + V W  ++ A   NG   E    F  +
Sbjct: 170 LEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKM 229

Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQ------AYAIKLLL-------------- 290
            R G+  D+ ++  +L     LG  +  E +        +  K+ +              
Sbjct: 230 RRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRL 289

Query: 291 ---YNNNSNV-----VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
              Y   + V     V W   L+GY   G    AI+ F +M    ++ D VTF   L+A 
Sbjct: 290 SASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSAC 349

Query: 343 A-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           +       G    N+  +++G   +   YS ++
Sbjct: 350 SHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMV 382



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 5/207 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H   +      +  + N+L+ MY + G L  A RLF+ +PD + +SWNSI+AA   
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        EG   F  +R         T+  LL+ CL  G    +E++HG     G  
Sbjct: 216 NG-----CAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFG 270

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               ++ AL++ Y+K G++  +  +F  +   D V W  ML  YA +G G E   LF  +
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESM 330

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE 278
              GL PD  +   +L   S  G  +E
Sbjct: 331 ANKGLEPDHVTFTHLLSACSHSGLVNE 357



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 146/346 (42%), Gaps = 51/346 (14%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVA 343
           A+KL     + ++V WN  +SG+ +    H ++  F  M    +V+ + VT L  ++A +
Sbjct: 93  ALKLFDDMPHKDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACS 150

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---CVC---------------- 384
           G   L+ G+ IHG  +K G    V V NSLINMY K G     C                
Sbjct: 151 GA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNS 208

Query: 385 ------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   G+  D+ T+ ++L+A   L  G  L++ IH      
Sbjct: 209 IIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVG-KLAESIHGLMFCT 267

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
              A   ++TAL+D Y + G ++ +  +F      D   W AM+ GY       +A++LF
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVK 539
             M   G   D +T    + AC    ++ +GK   +  +   G E  +   S ++D+  +
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGR 387

Query: 540 CGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           CG + DA  +  ++P  P+   W  ++  C  +G  +L   +   +
Sbjct: 388 CGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHL 433


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 199/580 (34%), Positives = 306/580 (52%), Gaps = 58/580 (10%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           T +  ++++L A +S P  +   ++IH    K+    D F+   L+  Y + G   +A  
Sbjct: 37  TPEAIVSALLIAVNSCPS-ISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALK 95

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCLL 506
           LF++    DL +WN++I G+  S   H +L  F  M      + +E+TI + + AC    
Sbjct: 96  LFDDMPHKDLVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNG-- 151

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L  GK +H + +K G  L++ V++ +++MY K G +  A  +F  IP P+ V+W ++I+
Sbjct: 152 ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
             V NG     +  +++MR  G+  DE T   L++A   L   +    IH  +      +
Sbjct: 212 AQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGA 271

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
              +  +L+D YAK G +  +Y +F ++   + V W AML G A HG G E +KLFE M 
Sbjct: 272 KITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMA 331

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+EPD VTF  +LSACS++GLV+E    F++M E YGIEP V+HYS +VD LGR G  
Sbjct: 332 NKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLL 391

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            +A E+I +MP E +A +  ALLGACRV G+ E GK VAE L+ +EP D   Y++LSN++
Sbjct: 392 NDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMY 451

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLI 843
           +A+  W D    R  +K + +K+ P                        + I++K+E L+
Sbjct: 452 SASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELL 511

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK------ 897
            +I++ GY   T++VL DVEEE KE  +  HSEKLA A+GL+ +     ++  K      
Sbjct: 512 GKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICG 571

Query: 898 --------------------EPLYANRFHHLRDGMCPCAD 917
                               +P    RFHH  DG C CAD
Sbjct: 572 DCHSTAKLISLIEKRTIIIRDP---KRFHHFSDGFCSCAD 608



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 149/333 (44%), Gaps = 46/333 (13%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HAR+  S    D F+ + L+T Y++ G    A +LFD MP +DL+SWNS+++ ++  
Sbjct: 59  REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC 118

Query: 133 GEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                  +      F +++  ++   + +T+  ++  C  +G + A + +HG+ +K+G  
Sbjct: 119 -------LHMSLTAFYTMKFEMSVKPNEVTILSMISAC--NGALDAGKYIHGFGIKVGGT 169

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V+ +L+N+Y K G +  A  LF+ + + + V W  ++ A   NG   E    F  +
Sbjct: 170 LEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKM 229

Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQ------AYAIKLLL-------------- 290
            R G+  D+ ++  +L     LG  +  E +        +  K+ +              
Sbjct: 230 RRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRL 289

Query: 291 ---YNNNSNV-----VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
              Y   + V     V W   L+GY   G    AI+ F +M    ++ D VTF   L+A 
Sbjct: 290 SASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSAC 349

Query: 343 A-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           +       G    N+  +++G   +   YS ++
Sbjct: 350 SHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMV 382



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 5/207 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H   +      +  + N+L+ MY + G L  A RLF+ +PD + +SWNSI+AA   
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        EG   F  +R         T+  LL+ CL  G    +E++HG     G  
Sbjct: 216 NG-----CAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFG 270

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               ++ AL++ Y+K G++  +  +F  +   D V W  ML  YA +G G E   LF  +
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESM 330

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE 278
              GL PD  +   +L   S  G  +E
Sbjct: 331 ANKGLEPDHVTFTHLLSACSHSGLVNE 357



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 145/346 (41%), Gaps = 51/346 (14%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVA 343
           A+KL     + ++V WN  +SG+ +    H ++  F  M    +V+ + VT L  ++A  
Sbjct: 93  ALKLFDDMPHKDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACN 150

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---CVC---------------- 384
           G   L+ G+ IHG  +K G    V V NSLINMY K G     C                
Sbjct: 151 GA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNS 208

Query: 385 ------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   G+  D+ T+ ++L+A   L  G  L++ IH      
Sbjct: 209 IIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVG-KLAESIHGLMFCT 267

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
              A   ++TAL+D Y + G ++ +  +F      D   W AM+ GY       +A++LF
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVK 539
             M   G   D +T    + AC    ++ +GK   +  +   G E  +   S ++D+  +
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGR 387

Query: 540 CGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           CG + DA  +  ++P  P+   W  ++  C  +G  +L   +   +
Sbjct: 388 CGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHL 433


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 191/552 (34%), Positives = 300/552 (54%), Gaps = 47/552 (8%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH   IK+   +D F+   L+ +Y + G   +A+ LF+     DL +WN+++ G      
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 473 SHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               L  F  M T SG + +E+T+ + V AC  +  L +GK +H   +K G      V +
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +++MY K G +  A  +F ++P    V+W +M+     NG  +  + +++ M+ +G+ P
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D+ T   L++A +      Q   IHA + +   ++D  +  +L+++YAK G +  +  +F
Sbjct: 321 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 380

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           +++  R+ + W AML G A H  G E +KLF+ M   GVE D VTF  +LSACS++GLV 
Sbjct: 381 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 440

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  + F +M E Y +EP ++HYS +VD LGR+GR ++A ELI SMP E S+ +  ALLGA
Sbjct: 441 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 500

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CRV G+ E GK VAE+L++L+P D   Y++LSNI++AA  W D +  R  MK + + ++P
Sbjct: 501 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNP 560

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  +D I  K+E LI++I+E G  P T+FVL D++EE K 
Sbjct: 561 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKV 620

Query: 869 RALYYHSEKLARAYGLI---------------------STPPSSVILSNKEPLY--ANRF 905
             +  HSEKLA A+GL+                     ST   + +L  +  +   + RF
Sbjct: 621 DMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRF 680

Query: 906 HHLRDGMCPCAD 917
           HH  DG+C C D
Sbjct: 681 HHFADGLCSCRD 692



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 149/309 (48%), Gaps = 33/309 (10%)

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           + HAR++ S    D F+ + L++MY + G    A+RLFD+MP++DL+SWNS+++    SG
Sbjct: 140 AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGL--SG 197

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
            G        F   R+  ES    + +TL  ++  C   G +   +++HG  +K+G+   
Sbjct: 198 RGYLGACLNAFCRMRT--ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGK 255

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             V  +L+N+Y K G +  A  LF+ M  R +V W  M+  +  NG+ E+   LF  + R
Sbjct: 256 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR 315

Query: 254 SGLCPDDESVQCVLGVISDLG-KRHEEQVQAY------------AIKLL-LYN------- 292
           +G+ PD  ++  +L   +D G  R  E + AY            A  LL LY        
Sbjct: 316 AGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 375

Query: 293 --------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                    + + + W   L+GY        AI+ F  M++  V+ D VTF   L+A + 
Sbjct: 376 SEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 435

Query: 345 TDNLNLGQQ 353
           +  +  G++
Sbjct: 436 SGLVEEGKK 444



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GKS H  ++         + N+L+ MY + G L  A +LF++MP R L+SWNS++  + H
Sbjct: 240 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 299

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        +G  LF  ++ +     + T+  LL+ C  +G    +E++H Y  + G  
Sbjct: 300 NGYAE-----KGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFN 354

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D  ++ AL+N+Y+K G++  ++ +F+ +++RD + W  ML  YA +  G E   LF  +
Sbjct: 355 ADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLM 414

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
            + G+  D  +   +L   S  G
Sbjct: 415 VKEGVEVDHVTFTHLLSACSHSG 437



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 111/510 (21%), Positives = 202/510 (39%), Gaps = 108/510 (21%)

Query: 110 LFDKMPDRDLISWNSILA--------------AYAHSG----EGNAENVTEGFRLFRSLR 151
           +F++   R  + WNSI++              A+ H+     +    N  +G  +FR   
Sbjct: 54  VFNQQLTRLAVPWNSIVSPVRCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREAS 113

Query: 152 ESITFTSRL-TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           + I   S + +L   +  C S  Y  A   +H   +K     D F+   LV++Y K G  
Sbjct: 114 QFIVVYSIVQSLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYD 170

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGV 269
            +A+ LFD M  +D+V W  ++   +  G+     + F  +   SG  P++ ++  V+  
Sbjct: 171 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 230

Query: 270 ISDLGKRHE-EQVQAYAIKLLLYNN----NS------------------------NVVLW 300
            +D+G   E + +    +KL +       NS                        ++V W
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  +  +   G     ++ F  M R+ +  D  T +  L A   T      + IH    +
Sbjct: 291 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 350

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
            GF + +I+  +L+N+Y+K+G               L AS  + E            IK+
Sbjct: 351 CGFNADIIIATALLNLYAKLG--------------RLNASEDIFE-----------EIKD 385

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFDLATWNAMIFGYILSNNSHKAL- 477
               D    TA++  Y  +    EA  LF+   K+G ++   + + F ++LS  SH  L 
Sbjct: 386 ---RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEV---DHVTFTHLLSACSHSGLV 439

Query: 478 -------ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
                  E+ S ++    RLD  +       C   L+ + G+   AY +     ++   S
Sbjct: 440 EEGKKYFEIMSEVYRVEPRLDHYS-------CMVDLLGRSGRLEDAYELIKSMPME--PS 490

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           SG+       GA++ A  ++ ++    +VA
Sbjct: 491 SGVW------GALLGACRVYGNVELGKEVA 514



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 14/204 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR    T      +S HA I       D  +   L+ +Y++ G L  +  +F+++ DR
Sbjct: 327 ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 386

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D I+W ++LA YA    G      E  +LF  + +       +T   LL  C  SG V  
Sbjct: 387 DRIAWTAMLAGYAVHACGR-----EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 441

Query: 178 SET---VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML- 232
            +    +     ++    D +    +V++  + G++ +A  L   M  E    +W  +L 
Sbjct: 442 GKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 499

Query: 233 --RAYAENGFGEEVFHLFVDLHRS 254
             R Y     G+EV    + L  S
Sbjct: 500 ACRVYGNVELGKEVAEQLLSLDPS 523


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 191/552 (34%), Positives = 300/552 (54%), Gaps = 47/552 (8%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH   IK+   +D F+   L+ +Y + G   +A+ LF+     DL +WN+++ G      
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 473 SHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               L  F  M T SG + +E+T+ + V AC  +  L +GK +H   +K G      V +
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +++MY K G +  A  +F ++P    V+W +M+     NG  +  + +++ M+ +G+ P
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D+ T   L++A +      Q   IHA + +   ++D  +  +L+++YAK G +  +  +F
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           +++  R+ + W AML G A H  G E +KLF+ M   GVE D VTF  +LSACS++GLV 
Sbjct: 324 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 383

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  + F +M E Y +EP ++HYS +VD LGR+GR ++A ELI SMP E S+ +  ALLGA
Sbjct: 384 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 443

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CRV G+ E GK VAE+L++L+P D   Y++LSNI++AA  W D +  R  MK + + ++P
Sbjct: 444 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNP 503

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  +D I  K+E LI++I+E G  P T+FVL D++EE K 
Sbjct: 504 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKV 563

Query: 869 RALYYHSEKLARAYGLI---------------------STPPSSVILSNKEPLY--ANRF 905
             +  HSEKLA A+GL+                     ST   + +L  +  +   + RF
Sbjct: 564 DMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRF 623

Query: 906 HHLRDGMCPCAD 917
           HH  DG+C C D
Sbjct: 624 HHFADGLCSCRD 635



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 216/455 (47%), Gaps = 55/455 (12%)

Query: 319 CFVNMIRSNVQYDSVTFLVALA-AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           C  N+ + +  +   + + +L  A++   +++    IH   +KS  YS   +G+ L++MY
Sbjct: 48  CNANLFQLSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMY 107

Query: 378 SKMG-----------------------------------CV---CGLRTD------QFTL 393
            K+G                                   C+   C +RT+      + TL
Sbjct: 108 FKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 167

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
            SV+ A + +   L   K +H   +K      + V  +LI++Y + G +  A  LFE   
Sbjct: 168 LSVVSACADMG-ALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 226

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
              L +WN+M+  +  +  + K ++LF+ M  +G   D+ T+   ++AC    + +Q + 
Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +HAY  + GF  D+ +++ +L++Y K G +  ++ IF +I   D +AWT M++G   +  
Sbjct: 287 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFV 630
              A+ ++  M   GV  D  TF  L+ A S    +E+G+   +I + + +++   D + 
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 406

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
              +VD+  + G +EDAY L K M M  ++ +W A+L     +GN E   ++ E + +  
Sbjct: 407 --CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS-- 462

Query: 690 VEP-DSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           ++P D   +I + +  S  GL  +A +   LM+E+
Sbjct: 463 LDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKER 497



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 149/309 (48%), Gaps = 33/309 (10%)

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           + HAR++ S    D F+ + L++MY + G    A+RLFD+MP++DL+SWNS+++    SG
Sbjct: 83  AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGL--SG 140

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
            G        F   R+  ES    + +TL  ++  C   G +   +++HG  +K+G+   
Sbjct: 141 RGYLGACLNAFCRMRT--ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGK 198

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             V  +L+N+Y K G +  A  LF+ M  R +V W  M+  +  NG+ E+   LF  + R
Sbjct: 199 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR 258

Query: 254 SGLCPDDESVQCVLGVISDLG-KRHEEQVQAY------------AIKLL-LYN------- 292
           +G+ PD  ++  +L   +D G  R  E + AY            A  LL LY        
Sbjct: 259 AGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 318

Query: 293 --------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                    + + + W   L+GY        AI+ F  M++  V+ D VTF   L+A + 
Sbjct: 319 SEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 378

Query: 345 TDNLNLGQQ 353
           +  +  G++
Sbjct: 379 SGLVEEGKK 387



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GKS H  ++         + N+L+ MY + G L  A +LF++MP R L+SWNS++  + H
Sbjct: 183 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 242

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        +G  LF  ++ +     + T+  LL+ C  +G    +E++H Y  + G  
Sbjct: 243 NGYAE-----KGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFN 297

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D  ++ AL+N+Y+K G++  ++ +F+ +++RD + W  ML  YA +  G E   LF  +
Sbjct: 298 ADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLM 357

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
            + G+  D  +   +L   S  G
Sbjct: 358 VKEGVEVDHVTFTHLLSACSHSG 380



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 143/338 (42%), Gaps = 49/338 (14%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N ++V WN  +SG    G     +  F  M   S  Q + VT L  ++A A    L+ G+
Sbjct: 125 NKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGK 184

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------------- 383
            +HG  +K G      V NSLINMY K+G +                             
Sbjct: 185 SLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNG 244

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                          G+  DQ T+ ++LRA +    G   ++ IH +  +    AD  ++
Sbjct: 245 YAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQ-AESIHAYIHRCGFNADIIIA 303

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TAL+++Y + G +  +E +FE     D   W AM+ GY +     +A++LF  M   G  
Sbjct: 304 TALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 363

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD--LCVSSGILDMYVKCGAMVDAQ 547
           +D +T    + AC    ++++GK+ +   M   + ++  L   S ++D+  + G + DA 
Sbjct: 364 VDHVTFTHLLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 422

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +   +P  P    W  ++  C   G  +L   +  Q+
Sbjct: 423 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 460



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 2/166 (1%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           LV A S  T++     IHA +IK    SD F+G  LV MY K G  EDA  LF +M  ++
Sbjct: 68  LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKD 127

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENF 717
            V WN+++ GL+  G     L  F  M+   G +P+ VT + V+SAC+  G + E  ++ 
Sbjct: 128 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG-KSL 186

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           H +  K G+  + +  + L++  G+ G    A +L   MP  +  S
Sbjct: 187 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS 232



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 172/432 (39%), Gaps = 89/432 (20%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C S  Y  A   +H   +K     D F+   LV++Y K G   +A+ LFD M  +D+V W
Sbjct: 75  CTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSW 131

Query: 229 KVMLRAYAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI 286
             ++   +  G+     + F  +   SG  P++ ++  V+   +D+G   E + +    +
Sbjct: 132 NSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVV 191

Query: 287 KLLLYNN----NS------------------------NVVLWNKKLSGYLQVGDNHGAIE 318
           KL +       NS                        ++V WN  +  +   G     ++
Sbjct: 192 KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMD 251

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M R+ +  D  T +  L A   T      + IH    + GF + +I+  +L+N+Y+
Sbjct: 252 LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYA 311

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           K+G               L AS  + E            IK+    D    TA++  Y  
Sbjct: 312 KLG--------------RLNASEDIFE-----------EIKD---RDRIAWTAMLAGYAV 343

Query: 439 NGSMAEAEYLFE--NKDGFDLATWNAMIFGYILSNNSHKAL--------ELFSHMHTSGE 488
           +    EA  LF+   K+G ++   + + F ++LS  SH  L        E+ S ++    
Sbjct: 344 HACGREAIKLFDLMVKEGVEV---DHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 400

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           RLD  +       C   L+ + G+   AY +     ++   SSG+       GA++ A  
Sbjct: 401 RLDHYS-------CMVDLLGRSGRLEDAYELIKSMPME--PSSGVW------GALLGACR 445

Query: 549 IFNDIPAPDDVA 560
           ++ ++    +VA
Sbjct: 446 VYGNVELGKEVA 457



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 14/194 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR    T      +S HA I       D  +   L+ +Y++ G L  +  +F+++ DR
Sbjct: 270 ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 329

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D I+W ++LA YA    G      E  +LF  + +       +T   LL  C  SG V  
Sbjct: 330 DRIAWTAMLAGYAVHACGR-----EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 384

Query: 178 SET---VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML- 232
            +    +     ++    D +    +V++  + G++ +A  L   M  E    +W  +L 
Sbjct: 385 GKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 442

Query: 233 --RAYAENGFGEEV 244
             R Y     G+EV
Sbjct: 443 ACRVYGNVELGKEV 456


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 228/702 (32%), Positives = 341/702 (48%), Gaps = 101/702 (14%)

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           +  +  M+R  V  ++ TF  AL A +   + + G+ IH   + +G  + + V  +L++M
Sbjct: 110 LHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDM 169

Query: 377 YSKMGC-----------------------------------VCGLRTDQFTLASVLRASS 401
           Y K  C                                   V  L + Q  +  +   +S
Sbjct: 170 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 229

Query: 402 SLPEGLHLSKQ---------IHVHAI----------KNDTVADSFVSTALIDVYCRNGSM 442
           +L   L L  Q         +H + I          K+       + TAL+D+Y + GS+
Sbjct: 230 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 289

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKA 501
             A  +F+     +  TW+A+I G++L +   +A  LF  M   G   L   +IA+A++A
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 349

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  L+ G+Q+HA   KSG   DL   + +L MY K G +  A ++F+++   D V++
Sbjct: 350 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSY 409

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           + ++SG V NG  + A  ++ +M+   V PD  T   L+ A S L AL+ GR  H ++I 
Sbjct: 410 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII 469

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
              +S+  +  +L+DMYAKCG I+ +  +F  M  R+ V WN M+ G   HG G+E   L
Sbjct: 470 RGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATAL 529

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F +M   G  PD VTFI +LSACS++GLV E    FH+M   YG+ P +EHY  +VD L 
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLS 589

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           R G   EA E I SMP  A   +  ALLGACRV  + + GK V+  +  L P  +  +VL
Sbjct: 590 RGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL 649

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI++AA ++D+    R   K +  KK P                       +  I+ +
Sbjct: 650 LSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRE 709

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           ++ ++  IK+ GY PDT FVL D+EEEEKE+AL  HSEKLA AYG++S      I   K 
Sbjct: 710 LDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKN 769

Query: 899 PLY-----------------------ANRFHHLRDGMCPCAD 917
                                     ANRFHH ++G C C D
Sbjct: 770 LRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGD 811



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 227/560 (40%), Gaps = 103/560 (18%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G L  A  LFD++P  D+ ++N ++ AY+ S    A    +G  L+R +       +  T
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAA---ADGLHLYRRMLRHRVAPNNYT 127

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
               LK C +         +H +A+  GL  D FVS AL+++Y K   + +A  +F  M 
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 222 ERDVVLWKVMLRAYAENG-FGEEVFHLF---VDLHRSGLCPDDESVQCVLGVISDLGKRH 277
            RD+V W  ML  YA +G +   V HL    + +HR  L P+  ++  +L +++  G   
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALA 245

Query: 278 E-EQVQAYAIKLLLYNNNS--------------------------------------NVV 298
           +   V AY I+  L+ N +                                      N V
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV-ALAAVAGTDNLNLGQQIHGT 357
            W+  + G++       A   F  M+   + + S T +  AL A A  D+L +G+Q+H  
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
             KSG ++ +  GNSL++MY+K G +                                  
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                    C +  D  T+ S++ A S L   L   +  H   I     +++ +  ALID
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHL-AALQHGRCSHGSVIIRGLASETSICNALID 484

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G +  +  +F      D+ +WN MI GY +     +A  LF  M+  G   D +T
Sbjct: 485 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 544

Query: 495 IATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
               + AC    ++ +GK       H Y +    E  +C    ++D+  + G + +A   
Sbjct: 545 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEF 600

Query: 550 FNDIPAPDDV-AWTTMISGC 568
              +P   DV  W  ++  C
Sbjct: 601 IQSMPLRADVRVWVALLGAC 620



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 24/383 (6%)

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA--LELFSHMHTSGERLDEITIA 496
           +G ++ A +LF+     D+ T+N +I  Y  S+ +  A  L L+  M       +  T  
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
            A+KAC  L     G+ +H +A+ +G + DL VS+ +LDMYVKC  + DA  IF  +PA 
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 557 DDVAWTTMISGCVDNGEEDLALS--IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           D VAW  M++G   +G    A++  +  QM++  + P+  T   L+   +   AL QG  
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 615 IHANLI----------KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
           +HA  I          K   +    +G +L+DMYAKCG++  A  +F  M  RN V W+A
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHG---VEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           ++ G        +   LF+ M A G   + P S+     L AC+    +    E  H + 
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMG-EQLHALL 366

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
            K G+  ++   + L+    +AG   +A  L   M  + + S + AL+      G  E  
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-YSALVSGYVQNGRAEEA 425

Query: 782 KWVAEKLMA--LEPFDSSAYVLL 802
             V +K+ A  +EP D++  V L
Sbjct: 426 FLVFKKMQACNVEP-DAATMVSL 447



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 45/312 (14%)

Query: 72  GKSTHARILNSSQIPDR----------FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           G S HA  + +   P+R           L   L+ MY++CGSL+YARR+FD MP R+ ++
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           W++++  +          +T+ F LF++ L + + F S  ++A  L+ C S  ++   E 
Sbjct: 307 WSALIGGFV-----LCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 361

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H    K G+  D     +L+++Y+K G I +A  LFD M  +D V +  ++  Y +NG 
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 421

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-------------------- 280
            EE F +F  +    + PD  ++  ++   S L      +                    
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 281 -VQAYA------IKLLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
            +  YA      +   ++N   + ++V WN  ++GY   G    A   F+ M       D
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 332 SVTFLVALAAVA 343
            VTF+  L+A +
Sbjct: 542 GVTFICLLSACS 553



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S +   S LR   S   L +G+  HA +  S    D    N+L++MY++ G +  A  LF
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D+M  +D +S++++++ Y  +G        E F +F+ ++         T+  L+  C  
Sbjct: 399 DEMAVKDTVSYSALVSGYVQNGRAE-----EAFLVFKKMQACNVEPDAATMVSLIPACSH 453

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +      HG  +  GL  +  +  AL+++Y+K G+I  ++ +F+ M  RD+V W  M
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 513

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF++++  G  PD  +  C+L   S  G
Sbjct: 514 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA--LSIYHQMRLSGVVPDEF 594
           ++  G +  A  +F+ IP+PD   +  +I     +     A  L +Y +M    V P+ +
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF   +KA S L     GR IH + I     +D FV  +L+DMY KC  + DA  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLK--LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
             R+ V WNAML G A HG     +   L   M+ H + P++ T + +L   +  G +++
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 214/692 (30%), Positives = 341/692 (49%), Gaps = 104/692 (15%)

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           +++V  N G ++   ++     Q D  T+ + ++A+            HG +L++  Y  
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTK----------HGRSLEAIQY-- 64

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                   N +    CV     D+  L SV +A +SL + ++ +K++H  AI+    +D 
Sbjct: 65  -------YNDFRHKNCV---EPDKLLLLSVAKACASLRDVMN-AKRVHEDAIRFGFCSDV 113

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
            +  ALID+Y +      A  +FE     D+ +W +M   Y+      +AL  F  M  +
Sbjct: 114 LLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLN 173

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           GER + +T+++ + AC  L  LK G+++H + +++G   ++ VSS +++MY  C ++  A
Sbjct: 174 GERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQA 233

Query: 547 QSIFNDIPAPDDVAWTTMIS-----------------------------------GCVDN 571
           Q +F+ +   D V+W  +I+                                   GC+ N
Sbjct: 234 QLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQN 293

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G  + AL +  +M+ SG  P++ T   ++ A + L +L  G+QIH  + +     D    
Sbjct: 294 GRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTT 353

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +LV MYAKCG++E +  +F  M  R+TV WN M++  + HGNGEE L LF +M   GV 
Sbjct: 354 TALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVR 413

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+SVTF GVLS CS++ LV E    F  M   + +EP+ +H+S +VD L RAGR +EA E
Sbjct: 414 PNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYE 473

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
            I  MP E +A    ALLG CRV  + E G+  A +L  +E  +   YVLLSNI  +A  
Sbjct: 474 FIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKL 533

Query: 812 WDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKE 848
           W + +  R  M+ + V K+P                       +D I+  ++ + ++++ 
Sbjct: 534 WSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRI 593

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN----- 903
            GY+P+TDFVL DV++EEKE  L  HSEKLA A+G+++    S I   K           
Sbjct: 594 AGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNA 653

Query: 904 ------------------RFHHLRDGMCPCAD 917
                             RFHH RDG+C C D
Sbjct: 654 IKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQD 685



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 234/511 (45%), Gaps = 95/511 (18%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           W   +S   + G +  AI+ + +    N V+ D +  L    A A   ++   +++H   
Sbjct: 45  WTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDA 104

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV---------------------------CGL----- 386
           ++ GF S V++GN+LI+MY K  C                            CGL     
Sbjct: 105 IRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREAL 164

Query: 387 -----------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                      R +  T++S+L A + L + L   +++H   ++N    + FVS+AL+++
Sbjct: 165 GAFRKMGLNGERPNSVTVSSILPACTDLKD-LKSGREVHGFVVRNGMGGNVFVSSALVNM 223

Query: 436 YCRNGSMAEAEYLFE-------------------NKD----------------GFDLATW 460
           Y    S+ +A+ +F+                   NK+                G + A+W
Sbjct: 224 YASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASW 283

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           NA+I G + +  + KALE+ S M  SG + ++ITI + + AC  L  L+ GKQ+H Y  +
Sbjct: 284 NAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFR 343

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
             F  DL  ++ ++ MY KCG +  ++ +F+ +   D V+W TMI     +G  + AL +
Sbjct: 344 HWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLL 403

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMY 638
           + +M  SGV P+  TF  ++   S    +++G  I  ++ + D S +P       +VD+ 
Sbjct: 404 FREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSR-DHSVEPDADHHSCMVDVL 462

Query: 639 AKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGE----ETLKLFEDMKAHGVEPD 693
           ++ G +E+AY   K+M +  T   W A+L G   + N E       +LFE      +E D
Sbjct: 463 SRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFE------IESD 516

Query: 694 SVTFIGVLSACSYTG-LVSEAYENFHLMREK 723
           +     +LS    +  L SEA E   LMR++
Sbjct: 517 NPGNYVLLSNILVSAKLWSEASETRKLMRDR 547



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 199/514 (38%), Gaps = 103/514 (20%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+ +   S  D++  K  H   +      D  L N L+ MY +C     AR +F+ MP 
Sbjct: 82  LSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF 141

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           RD+ISW S+ + Y + G      + E    FR +  +    + +T++ +L  C     + 
Sbjct: 142 RDVISWTSMASCYVNCGL-----LREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           +   VHG+ ++ G+  + FVS ALVN+Y+    IR+A+ +FD M  RD V W V++ AY 
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSN 296
            N   E+   +F                         G+   E V              N
Sbjct: 257 LNKECEKGLSVF-------------------------GRMMSEGVGL------------N 279

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
              WN  + G +Q G    A+E    M  S  + + +T    L A    ++L  G+QIHG
Sbjct: 280 YASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHG 339

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
              +  F+  +    +L+ MY+K G                         L LS+++   
Sbjct: 340 YIFRHWFFQDLTTTTALVFMYAKCG------------------------DLELSRRVFSM 375

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             K DTV                                   +WN MI    +  N  +A
Sbjct: 376 MTKRDTV-----------------------------------SWNTMIIATSMHGNGEEA 400

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILD 535
           L LF  M  SG R + +T    +  C    ++ +G  +  + +     E D    S ++D
Sbjct: 401 LLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVD 460

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           +  + G + +A      +P  P   AW  ++ GC
Sbjct: 461 VLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGC 494


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 260/942 (27%), Positives = 424/942 (45%), Gaps = 155/942 (16%)

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL-------TLAPLLKLCLS 171
           LI+   +         GNA   + G   FR L+E +             +   +L+LC  
Sbjct: 17  LIAAGKLEEDEEDDDAGNARRKSRG-EDFRELQEFLRIIDARDEPFDVDSYQHVLQLCTR 75

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +     VH +  +  +  + FV   LV +Y+ FG   EA+ +FDG+   +V+ +  +
Sbjct: 76  LRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHNVLSFTAI 135

Query: 232 LRAYAENGFGEE---VFHL-------------------------------FVD-LHRSGL 256
           +RAY   G  +E   + HL                               F D + R G 
Sbjct: 136 MRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGY 195

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
             D      ++G+ S+ G+  E  VQA+  +  L   +S+VV W K L+   +  D  GA
Sbjct: 196 DLDAGVAISLIGMYSNCGE-IEAAVQAFD-RAFLRAPSSDVVSWTKILAACNEHRDYIGA 253

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           ++ F  M    V  D + F+  L +V G  ++  G++IH   L        +VG +++ M
Sbjct: 254 LDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKM 313

Query: 377 YSKMGCV-------------------------C------------------GLRTDQFTL 393
           Y+++G +                         C                  G++ ++ T 
Sbjct: 314 YARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTF 373

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTV---ADSFVSTALIDVYCRNGSMAEAEYLFE 450
            ++L    +L   L   K+I   A +       A + + TA+I ++ R  SM  A   F+
Sbjct: 374 ITILDTCKNL--ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFD 431

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 +A + AMI GY  +    +AL +F  M       D + +A A+ AC  +  L++
Sbjct: 432 KISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEE 491

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GK +H  AM  G   D  V + ++DMY +CG+M DA ++F +I  PD VAW+ MI+    
Sbjct: 492 GKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALGR 551

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQIHANLIKLDCSSDPF 629
           +G+   A+++  +M+  G  P   T   ++ A +    +E+  R++H+ L+     SDP 
Sbjct: 552 HGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPE 611

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG---LAQHGNGEETLKLFEDMK 686
           V  +++ MYAK G+I++A   F +++  +   W  ML     L ++   +  LKL   M+
Sbjct: 612 VKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQ 671

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             GV PD VTF+ +L+AC+Y G + EA   F  M+  YG+ PE+EHY  LVD + R G  
Sbjct: 672 QDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYL 731

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM----ALEPFDSSAYVLL 802
           +EA +LI  +P + +  +  ALL  C+ Q D    + V E +M     L+P  + A+ + 
Sbjct: 732 QEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTGAHRV- 790

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADL-----------------------IFAKV 839
                 A +W++    R  M  + +KK+P                          I+A+V
Sbjct: 791 ------AARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEV 844

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE- 898
           + +   IK+ GY+PDT +VL DV E++KER L+YHSE+LA AYG ++TPP   +   K  
Sbjct: 845 DRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNL 904

Query: 899 ----------PLYAN------------RFHHL-RDGMCPCAD 917
                      LYA             RFHH  +DG C C D
Sbjct: 905 RVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGD 946



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 123/584 (21%), Positives = 229/584 (39%), Gaps = 88/584 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM----PDRDLISWN 123
           DL LG+  H  I       D  +  +L+ MYS CG +  A + FD+     P  D++SW 
Sbjct: 179 DLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWT 238

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
            ILAA          +      LF  +RE      R+    +L   +  G +   + +H 
Sbjct: 239 KILAAC-----NEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHS 293

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             L   L  D  V  A+V +Y++ G I++A   FD + +  V  W V++ AY   G    
Sbjct: 294 MVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNS 353

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK---------------- 287
           V  +   +   G+ P++ +   +L    +L     +++QA A +                
Sbjct: 354 VMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAV 413

Query: 288 LLLYNNNSNVVL---------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
           + +++  S+++L               +   ++GY        A+  F  MIR  V  D+
Sbjct: 414 IGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADN 473

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------- 383
           +   VA++A A   +L  G+ +H + +  G +   +V  +L++MYS+ G +         
Sbjct: 474 LVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGE 533

Query: 384 ----------------------------------CGLRTDQFTLASVLRASSSLPEGLHL 409
                                              G R    T+  VL A +        
Sbjct: 534 IERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEA 593

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++++H   +     +D  V  A++ +Y + GS+ EA   F+  +  D+  W  M+  Y  
Sbjct: 594 ARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCR 653

Query: 470 ---SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ-GKQMHAYAMKSGFEL 525
               N S +AL+L   M   G   D++T    + AC     L++ G+         G   
Sbjct: 654 LGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVP 713

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           ++     ++D   + G + +A+ +   +P   +++ W  ++  C
Sbjct: 714 EMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECC 757



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 9/199 (4%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S  DL  GK+ H   ++     D  +   L+ MYSRCGS+  A  +F ++   D ++W++
Sbjct: 485 SIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSA 544

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHG 183
           ++AA    G+           +   +++     S  T+  +L  C  +G +  A+  VH 
Sbjct: 545 MIAALGRHGDPRG-----AVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHS 599

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG---F 240
             +  G   D  V  A++ +Y+K G I+EA   FD ++  DV  W  ML AY   G    
Sbjct: 600 LLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNA 659

Query: 241 GEEVFHLFVDLHRSGLCPD 259
            +    L   + + G+ PD
Sbjct: 660 SDRALKLARMMQQDGVMPD 678


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 228/696 (32%), Positives = 339/696 (48%), Gaps = 101/696 (14%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+R  V  ++ TF  AL A +   + + G+ IH   + +G  + + V  +L++MY K  C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 383 -----------------------------------VCGLRTDQFTLASVLRASSSLPEGL 407
                                              V  L + Q  +  +   +S+L   L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 408 HLSKQ---------IHVHAI----------KNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
            L  Q         +H + I          K+       + TAL+D+Y + GS+  A  +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLM 507
           F+     +  TW+A+I G++L +   +A  LF  M   G   L   +IA+A++AC  L  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L+ G+Q+HA   KSG   DL   + +L MY K G +  A ++F+++   D V+++ ++SG
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            V NG  + A  ++ +M+   V PD  T   L+ A S L AL+ GR  H ++I    +S+
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +  +L+DMYAKCG I+ +  +F  M  R+ V WN M+ G   HG G+E   LF +M  
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G  PD VTFI +LSACS++GLV E    FH+M   YG+ P +EHY  +VD L R G   
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA E I SMP  A   +  ALLGACRV  + + GK V+  +  L P  +  +VLLSNI++
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 808 AANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIK 844
           AA ++D+    R   K +  KK P                       +  I+ +++ ++ 
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY--- 901
            IK+ GY PDT FVL D+EEEEKE+AL  HSEKLA AYG++S      I   K       
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 660

Query: 902 --------------------ANRFHHLRDGMCPCAD 917
                               ANRFHH ++G C C D
Sbjct: 661 CHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGD 696



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 218/558 (39%), Gaps = 118/558 (21%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L+   + +D   G++ H   +++    D F++  L+ MY +C  L  A  +F  MP RDL
Sbjct: 17  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 76

Query: 120 ISWNSILAAYAHSG---EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           ++WN++LA YAH G      A  ++   ++ R LR + +     TL  LL L    G + 
Sbjct: 77  VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR-LRPNAS-----TLVALLPLLAQQGALA 130

Query: 177 ASETVHGYALKIGL---------VWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVV 226
              +VH Y ++  L         + D  + G AL+++Y+K G +  A+ +FD M  R+ V
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 190

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-PDDESVQCVLGVISDLGK-RHEEQVQAY 284
            W  ++  +       + F LF  +   GLC     S+   L   + L   R  EQ+ A 
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 250

Query: 285 ----------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
                                       AI L       + V ++  +SGY+Q G    A
Sbjct: 251 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 310

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
              F  M   NV+ D+ T +  + A +    L  G+  HG+ +  G  S   + N+LI+M
Sbjct: 311 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 370

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           Y+K G     R D                   LS+Q+                       
Sbjct: 371 YAKCG-----RID-------------------LSRQV----------------------- 383

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
                       F      D+ +WN MI GY +     +A  LF  M+  G   D +T  
Sbjct: 384 ------------FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 431

Query: 497 TAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             + AC    ++ +GK       H Y +    E  +C    ++D+  + G + +A     
Sbjct: 432 CLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQ 487

Query: 552 DIPAPDDV-AWTTMISGC 568
            +P   DV  W  ++  C
Sbjct: 488 SMPLRADVRVWVALLGAC 505



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S +   S LR   S   L +G+  HA +  S    D    N+L++MY++ G +  A  LF
Sbjct: 224 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D+M  +D +S++++++ Y  +G        E F +F+ ++         T+  L+  C  
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAE-----EAFLVFKKMQACNVEPDAATMVSLIPACSH 338

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +      HG  +  GL  +  +  AL+++Y+K G+I  ++ +F+ M  RD+V W  M
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 398

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF++++  G  PD  +  C+L   S  G
Sbjct: 399 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 190/574 (33%), Positives = 304/574 (52%), Gaps = 46/574 (8%)

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
             T    L+++S LP  L   +Q+H  ++K  +  +  V T+L+ +Y R G +  A+ +F
Sbjct: 117 HLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVF 176

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +        +W A+I  Y+ + +  +A+ +  +   +G R D  T    + AC  +  L 
Sbjct: 177 DEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLA 236

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G+ +   A + G    + V++  +D+YVKCG M  A+ +F+ +   D VAW  M+ G  
Sbjct: 237 TGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYA 296

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG    AL ++  M+  GV PD +  A  + A + L AL+ GRQ    +   +   +P 
Sbjct: 297 SNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 356

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +G +L+DMYAKCG+  +A+++F+QM  ++ ++WNAM++GL   G+ +    L   M+  G
Sbjct: 357 LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG 416

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           V+ +  TFIG+L +C++TGL+ +    FH M + Y I P +EHY  +VD L RAG  +EA
Sbjct: 417 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA 476

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            +LI  MP  A+A +  ALLG C++  + E  + V  +L+ LEP++S  YV+LSNI++  
Sbjct: 477 HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNR 536

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
            +W+D    R +MK K V+K PA                       D I+ K++ L   +
Sbjct: 537 GRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 596

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           K  GY P T+ V+ DVE+EEKE  L +HSEKLA A+ L+ T P   I             
Sbjct: 597 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCH 656

Query: 894 --------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                   ++++E +    NRFH  RDG C C D
Sbjct: 657 TAIKLISRITHREIIVRDNNRFHCFRDGSCSCND 690



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 184/425 (43%), Gaps = 41/425 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  HAR L      +  +  +L+T+Y+RCG L  A+R+FD+MP    +SW +++ A
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +G+     + E   + R+   +       T   +L  C     +   ETV   A + 
Sbjct: 194 YMDAGD-----LREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQE 248

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+    FV+ A V++Y K G++ +A+ +FD M+++D V W  M+  YA NG   E   LF
Sbjct: 249 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 308

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNVVLWNKKLSGY 307
           + +   G+ PD  +V   L   + LG      +   AI+++ ++    N VL    +  Y
Sbjct: 309 LAMQAEGVRPDCYAVAGALSACTRLGAL---DLGRQAIRMVDWDEFLDNPVLGTALIDMY 365

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            + G    A   F  M + ++    + +   +  +  T +      + G   KSG     
Sbjct: 366 AKCGSTAEAWVVFQQMRKKDI----IVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK--- 418

Query: 368 IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +  N+ I +     C C   T    +    R   ++ +  H+S +I  +           
Sbjct: 419 LNDNTFIGLL----CSC---THTGLIQDGRRYFHNMTKLYHISPRIEHYG---------- 461

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHMHTS 486
               ++D+  R G + EA  L ++         NA+I G +L     H+  EL  H+ T 
Sbjct: 462 ---CIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGGCKIHRNAELAEHVLTQ 514

Query: 487 GERLD 491
             RL+
Sbjct: 515 LIRLE 519


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 202/582 (34%), Positives = 301/582 (51%), Gaps = 56/582 (9%)

Query: 385 GLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           G+  + FT +++L A +    L EG  +   IH H   ND     FV+TAL+D+Y + GS
Sbjct: 195 GIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLND----PFVATALLDMYAKCGS 250

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M  AE +F+     +L +WN+MI G++ +    +A+ +F  + + G   D+++I++ + A
Sbjct: 251 MLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP--DQVSISSVLSA 308

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L+ L  GKQ+H   +K G    + V + ++DMY KCG   DA  +F      D V W
Sbjct: 309 CAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTW 368

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             MI GC      + A + +  M   GV PDE +++ L  AS+ + AL QG  IH++++K
Sbjct: 369 NVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLK 428

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                +  +  SLV MY KCG++ DAY +F++    N V W AM+    QHG   E +KL
Sbjct: 429 TGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKL 488

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           FE+M   GV P+ +TF+ VLSACS+TG + + ++ F+ M   + I+P +EHY+ +VD LG
Sbjct: 489 FEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLG 548

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           R GR +EA   I SMPFE  + +  ALLGAC    + E G+ VAE+L  LEP +   Y+L
Sbjct: 549 RVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYML 608

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LSNI+      ++    R  M    V+K+                           I+  
Sbjct: 609 LSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGM 668

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           ++ L + IK  GYV +T F    VE  E E++L+ HSEKLA A+GL+  PP S +   K 
Sbjct: 669 LQKLKELIKRRGYVAETQFATNSVEGSE-EQSLWCHSEKLALAFGLLVLPPGSPVRIKKN 727

Query: 899 PLYA-----------------------NRFHHLRDGMCPCAD 917
                                      NRFH   +G C C D
Sbjct: 728 LRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMD 769



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 178/364 (48%), Gaps = 19/364 (5%)

Query: 401 SSLPEGLHL------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           SS+P+  HL            + QIH   +  +  A       L+ +Y + GS+     L
Sbjct: 95  SSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLL 154

Query: 449 FEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
           F        ++ TW  +I     SN   +AL  F+ M T+G   +  T +  + AC    
Sbjct: 155 FNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAA 214

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           +L +G+Q+HA   K  F  D  V++ +LDMY KCG+M+ A+++F+++P  + V+W +MI 
Sbjct: 215 LLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIV 274

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G V N     A+ ++ ++   G  PD+ + + ++ A + L  L+ G+Q+H +++K     
Sbjct: 275 GFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVG 332

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
             +V  SLVDMY KCG  EDA  LF     R+ V WN M++G  +  N E+    F+ M 
Sbjct: 333 LVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMI 392

Query: 687 AHGVEPDSVTFIGVLSA-CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
             GVEPD  ++  +  A  S   L      + H+++  +     +   S LV   G+ G 
Sbjct: 393 REGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRIS--SSLVTMYGKCGS 450

Query: 746 TKEA 749
             +A
Sbjct: 451 MLDA 454



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 136/248 (54%), Gaps = 7/248 (2%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMI 565
           LK   Q+H+  + +     L   + +L +Y KCG++     +FN  P P    V WTT+I
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +    + +   AL+ +++MR +G+ P+ FTF+ ++ A +    L +G+QIHA + K    
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFL 232

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +DPFV  +L+DMYAKCG++  A  +F +M  RN V WN+M+VG  ++      + +F ++
Sbjct: 233 NDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREV 292

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
            + G  PD V+   VLSAC+  GLV   + +  H    K G+   V   + LVD   + G
Sbjct: 293 LSLG--PDQVSISSVLSACA--GLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCG 348

Query: 745 RTKEAGEL 752
             ++A +L
Sbjct: 349 LFEDATKL 356



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/570 (20%), Positives = 215/570 (37%), Gaps = 118/570 (20%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM--PDR 117
           L+HA      L+  + HA + N          N L+ +Y++CGS+ +   LF+    P  
Sbjct: 113 LKHATQIHSQLVTTNNHASLAN---------INTLLLLYAKCGSIHHTLLLFNTYPHPST 163

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++++W +++   + S +       +    F  +R +  + +  T + +L  C  +  +  
Sbjct: 164 NVVTWTTLINQLSRSNKP-----FQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSE 218

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H    K   + D FV+ AL+++Y+K G +  A+ +FD M  R++V W  M+  + +
Sbjct: 219 GQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVK 278

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYN 292
           N        +F ++   G  PD  S+  VL   +     D GK+    +    +  L+Y 
Sbjct: 279 NKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYV 336

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
            NS                        +VV WN  + G  +  +   A   F  MIR  V
Sbjct: 337 KNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGV 396

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           + D  ++     A A    L  G  IH   LK+G      + +SL+ MY K G       
Sbjct: 397 EPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCG------- 449

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
                                                     +++D Y           +
Sbjct: 450 ------------------------------------------SMLDAY----------QV 457

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F      ++  W AMI  +     +++A++LF  M   G   + IT  + + AC     +
Sbjct: 458 FRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKI 517

Query: 509 KQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
             G        + + +K G E   C    ++D+  + G + +A      +P  PD + W 
Sbjct: 518 DDGFKYFNSMANVHNIKPGLEHYAC----MVDLLGRVGRLEEACRFIESMPFEPDSLVWG 573

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
            ++  C  +   ++   +    RL  + PD
Sbjct: 574 ALLGACGKHANVEMGREVAE--RLFKLEPD 601



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 165/381 (43%), Gaps = 41/381 (10%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILR 61
           +T L  N  P      V +++      R+   F    L F  +   +    +   FS + 
Sbjct: 150 HTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQA--LTFFNRMRTTGIYPNHFTFSAIL 207

Query: 62  HAISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
            A + + LL  G+  HA I     + D F+   L+ MY++CGS++ A  +FD+MP R+L+
Sbjct: 208 PACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLV 267

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLCLSSGYVWASE 179
           SWNS++  +        +N   G R     RE ++    +++++ +L  C     +   +
Sbjct: 268 SWNSMIVGF-------VKNKLYG-RAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGK 319

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            VHG  +K GLV   +V  +LV++Y K G   +A  LF G  +RDVV W VM+       
Sbjct: 320 QVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCR 379

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNS--- 295
             E+    F  + R G+ PD+ S   +    + +    +   + ++ +K     N+    
Sbjct: 380 NFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISS 439

Query: 296 -------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                                    NVV W   ++ + Q G  + AI+ F  M+   V  
Sbjct: 440 SLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVP 499

Query: 331 DSVTFLVALAAVAGTDNLNLG 351
           + +TF+  L+A + T  ++ G
Sbjct: 500 EYITFVSVLSACSHTGKIDDG 520


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 210/662 (31%), Positives = 322/662 (48%), Gaps = 96/662 (14%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------------------- 379
           G Q+H   +  GF   +I+ N LI+MY K                               
Sbjct: 23  GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82

Query: 380 -------MGCVC-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                  +  +C     G++ ++FT ++ L+A  +L   +    QIH   +K+     S 
Sbjct: 83  EGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV-VENGMQIHGMCVKSGFEWVSV 141

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  A ID+Y + G +  AE +F      +L +WNAMI G+    N  K+L LF  M   G
Sbjct: 142 VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL--CVSSGILDMYVKCGAMVD 545
           E  DE T  + +KACG L  ++ G Q+HA  +  GF + +   ++S I+D+Y KCG + +
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           AQ +F+ I   + ++W+ +I G    G    A+ ++ Q+R S    D F  +I++   + 
Sbjct: 262 AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFAD 321

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L  +EQG+Q+H  ++K+    D  V  S++DMY KCG  E+A  LF +M +RN V W  M
Sbjct: 322 LALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVM 381

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G  +HG GE+ + LF  M+  G+E D V ++ +LSACS++GL+ E+ E F  +   + 
Sbjct: 382 ITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQ 441

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           ++P +EHY+ +VD LGRAG+ KEA  LI +M  + +  + + LL ACRV G+ E G+ V 
Sbjct: 442 MKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVG 501

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------- 832
           E L  ++  +   YV++SNI+A A  W +    R  +K K +KK+               
Sbjct: 502 EILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFF 561

Query: 833 ----------DLIFAKVEGLIKRIKEG-GYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
                     + I   ++ + +R+KE  GY     F L DVEEE KE  L  HSEKLA  
Sbjct: 562 YGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIG 621

Query: 882 YGLIS---TPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
             L+         VI   K                           ANRFH   DG+C C
Sbjct: 622 LALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSC 681

Query: 916 AD 917
            D
Sbjct: 682 GD 683



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 198/375 (52%), Gaps = 12/375 (3%)

Query: 388 TDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           +++  LA +LR  S      +GL    Q+H  A+      D  ++  LID+Y +   +  
Sbjct: 2   SERQRLAKLLRNCSKNGLFDQGL----QVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDL 57

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     ++ +W A++ GY+   N+  +L L   M  SG + +E T +T++KACG 
Sbjct: 58  ACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGA 117

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L +++ G Q+H   +KSGFE    V +  +DMY KCG +  A+ +FN +P  + V+W  M
Sbjct: 118 LGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAM 177

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--L 622
           I+G    G    +L ++ +M+  G VPDEFTF   +KA   L A+  G QIHA+LI    
Sbjct: 178 IAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGF 237

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             S    +  ++VD+YAKCG + +A  +F +++ +N + W+A++ G AQ GN  E + LF
Sbjct: 238 PISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLF 297

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALG 741
             ++      D      ++   +   LV +  + + ++++   G++  V +   ++D   
Sbjct: 298 RQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANS--IIDMYL 355

Query: 742 RAGRTKEAGELILSM 756
           + G T+EA  L   M
Sbjct: 356 KCGLTEEAERLFSEM 370



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/567 (21%), Positives = 220/567 (38%), Gaps = 105/567 (18%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S   +   +LR+         G   HA  +N     D  + N+L+ MY +C  +  A  +
Sbjct: 2   SERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSV 61

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           FD+M +R+++SW +++  Y    EGNA+       L   +  S    +  T +  LK C 
Sbjct: 62  FDRMLERNVVSWTALMCGYLQ--EGNAKG---SLALLCEMGYSGVKPNEFTFSTSLKACG 116

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           + G V     +HG  +K G  W   V  A +++YSK G+I  A+ +F+ M  R++V W  
Sbjct: 117 ALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNA 176

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAI--- 286
           M+  +   G G +   LF  +   G  PD+ +    L     LG  R   Q+ A  I   
Sbjct: 177 MIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236

Query: 287 ---------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                      K+       N++ W+  + G+ Q G+   A++ 
Sbjct: 237 FPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDL 296

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  +  S    D     + +   A    +  G+Q+H   LK      + V NS+I+MY K
Sbjct: 297 FRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLK 356

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
               CGL  +   L S ++                        V +    T +I  Y ++
Sbjct: 357 ----CGLTEEAERLFSEMQ------------------------VRNVVSWTVMITGYGKH 388

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G   +A                               + LF+ M   G  LDE+     +
Sbjct: 389 GLGEKA-------------------------------IHLFNRMQLDGIELDEVAYLALL 417

Query: 500 KACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            AC    ++++ ++  +     + MK   E   C    ++D+  + G + +A+++  ++ 
Sbjct: 418 SACSHSGLIRESQEYFSRLCNNHQMKPNIEHYAC----MVDILGRAGQLKEAKNLIENMK 473

Query: 555 -APDDVAWTTMISGCVDNGEEDLALSI 580
             P++  W T++S C  +G  ++   +
Sbjct: 474 LKPNEGIWQTLLSACRVHGNLEIGREV 500



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 20/273 (7%)

Query: 23  FTKDTYRNLPSFSL-------------SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL 69
           F K  +RNL S++              SL+ F +            + S L+   +   +
Sbjct: 163 FNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAI 222

Query: 70  LLGKSTHARILNSS-QIPDR-FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
             G   HA ++     I  R  + + ++ +Y++CG L  A+++FD++  ++LISW++++ 
Sbjct: 223 RGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQ 282

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            +A  G     N+ E   LFR LRES++      L+ ++ +      V   + +H Y LK
Sbjct: 283 GFAQEG-----NLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK 337

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +    D  V+ +++++Y K G   EA+ LF  MQ R+VV W VM+  Y ++G GE+  HL
Sbjct: 338 VPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHL 397

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           F  +   G+  D+ +   +L   S  G   E Q
Sbjct: 398 FNRMQLDGIELDEVAYLALLSACSHSGLIRESQ 430



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 37/247 (14%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-------------SDL 69
           F +   +NL S+S  +  F Q+ +   +      F  LR ++S              +DL
Sbjct: 266 FDRIEQKNLISWSALIQGFAQEGNLLEAMD---LFRQLRESVSNVDGFVLSIMMGVFADL 322

Query: 70  LL---GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
            L   GK  H  IL      D  + N+++ MY +CG    A RLF +M  R+++SW  ++
Sbjct: 323 ALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMI 382

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETV 181
             Y   G G      +   LF  ++        +    LL  C  SG +     + S   
Sbjct: 383 TGYGKHGLGE-----KAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLC 437

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENG- 239
           + + +K  +  + +    +V+I  + G+++EAK L + M+ + +  +W+ +L A   +G 
Sbjct: 438 NNHQMKPNI--EHYA--CMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGN 493

Query: 240 --FGEEV 244
              G EV
Sbjct: 494 LEIGREV 500


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 206/587 (35%), Positives = 315/587 (53%), Gaps = 61/587 (10%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMA 443
           L  D FTL+ ++ A      G+++     +HA+   T  DS+VS   ALI  Y +NG + 
Sbjct: 136 LDMDGFTLSGIITAC-----GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 444 EAEYLFE-NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           EA  +F    +  D  +WN+M+  Y+      KALEL+  M   G  +D  T+A+ + A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA-MVDAQSIFNDIPAPDDVAW 561
             +  L  G Q HA  +KSG+  +  V SG++D+Y KCG  M+D + +F++I  PD V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 562 TTMISG-CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
            TMISG  +     D AL  + Q+++ G  PD+ +   ++ A S +++  QGRQ+H   +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 621 KLDCSSDPF-VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           KLD  S+   V  +L+ MY+KCGN+ DA  LF  M   NTV +N+M+ G AQHG G ++L
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF+ M   G  P ++TFI VL+AC++TG V +    F++M++K+GIEPE  H+S ++D 
Sbjct: 431 HLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDL 490

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAG+  EA  LI ++PF+       ALLGACR+ G+ E     A +L+ L+P +++ Y
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPY 550

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           V+L+NI++   +  D  S R  M+ + VKK P                          I 
Sbjct: 551 VMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQ 610

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLD----VEEEEKERALYYHSEKLARAYGLISTPPSSV 892
             +E ++++IK+ GY P+    L+     V + E+E  L +HSEKLA ++GL+ST     
Sbjct: 611 EYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEP 670

Query: 893 ILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
           IL  K                           ++RFH  +DG C C 
Sbjct: 671 ILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCG 717



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 148/610 (24%), Positives = 268/610 (43%), Gaps = 98/610 (16%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            LK C++   +   +++H   +K  +    ++S   + +YSK  ++  A+ +FD   + +
Sbjct: 14  FLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCN 73

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           V  +  ++ AYA+  + E    LF ++      P  +SV                     
Sbjct: 74  VFSFNTLISAYAKESYVEVAHQLFDEM------PQPDSVS-------------------- 107

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                          +N  ++ Y + GD   A + F+ M  + +  D  T L  +    G
Sbjct: 108 ---------------YNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFT-LSGIITACG 151

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------------- 381
             N+ L +Q+H  ++ +G  S V VGN+LI  YSK G                       
Sbjct: 152 I-NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNS 210

Query: 382 ---------------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                 V GL  D FTLASVL A +++ + L    Q H   IK+
Sbjct: 211 MVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLG-GLQFHAKLIKS 269

Query: 421 DTVADSFVSTALIDVYCR-NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-SHKALE 478
               +S V + LID+Y +  G M +   +F+     DL  WN MI GY L  + S +ALE
Sbjct: 270 GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALE 329

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILDMY 537
            F  +   G R D+ ++   + AC  +    QG+Q+H  A+K     + + V++ ++ MY
Sbjct: 330 CFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMY 389

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG + DA+++F+ +P  + V++ +MI+G   +G    +L ++ +M   G  P   TF 
Sbjct: 390 SKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFI 449

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A +    +E G+ I+ N++K     +P  G    ++D+  + G + +A  L + + 
Sbjct: 450 SVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIP 508

Query: 656 M-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEA 713
                  W+A+L     HGN E  +K    +    ++P ++  ++ + +  S  G + +A
Sbjct: 509 FDPGFFFWSALLGACRIHGNVELAIKAANRLLQ--LDPLNAAPYVMLANIYSDNGRLQDA 566

Query: 714 YENFHLMREK 723
                LMR++
Sbjct: 567 ASVRKLMRDR 576



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 250/602 (41%), Gaps = 140/602 (23%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           HFSS   + + F  L+  I+  DL  GKS HA  + S      +L+N+ + +YS+C  L 
Sbjct: 3   HFSSLLHNFRQF--LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLS 60

Query: 106 YARR-------------------------------LFDKMPDRDLISWNSILAAYAHSGE 134
            ARR                               LFD+MP  D +S+N+++AAYA  G+
Sbjct: 61  AARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-LSSGYVWASETVHGYALKIGLVWD 193
                    F+LF  +RE+       TL+ ++  C ++ G +     +H  ++  GL  D
Sbjct: 121 -----TQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGL--D 170

Query: 194 EFVS--GALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            +VS   AL+  YSK G ++EA+ +F  + E RD V W  M+ AY ++  G +   L+++
Sbjct: 171 SYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLE 230

Query: 251 LHRSGLCPDDESVQCVLGVISDL----------------GKRHEEQVQAYAI-------- 286
           +   GL  D  ++  VL   +++                G      V +  I        
Sbjct: 231 MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGG 290

Query: 287 ------KLLLYNNNSNVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDSVTFLVAL 339
                 K+    +N ++VLWN  +SGY    D +  A+ECF  +     + D  + +  +
Sbjct: 291 CMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVI 350

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           +A +   + + G+Q+HG  LK    S  I V N+LI MYSK    CG   D  TL     
Sbjct: 351 SACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSK----CGNLRDAKTLF---- 402

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
              ++PE              ++TV                                   
Sbjct: 403 --DTMPE--------------HNTV----------------------------------- 411

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-QMHAY 517
           ++N+MI GY       ++L LF  M   G     IT  + + AC     ++ GK   +  
Sbjct: 412 SYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMM 471

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDL 576
             K G E +    S ++D+  + G + +A+ +   IP  P    W+ ++  C  +G  +L
Sbjct: 472 KQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVEL 531

Query: 577 AL 578
           A+
Sbjct: 532 AI 533



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 172/348 (49%), Gaps = 7/348 (2%)

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F    LI  Y +   +  A  LF+     D  ++N +I  Y    ++  A +LF  M  +
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
              +D  T++  + ACG  + L   +Q+HA ++ +G +  + V + ++  Y K G + +A
Sbjct: 135 FLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192

Query: 547 QSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           + IF+ +    D+V+W +M+   + + E   AL +Y +M + G++ D FT A ++ A + 
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN-IEDAYILFKQMDMRNTVLWNA 664
           +  L  G Q HA LIK     +  VG  L+D+Y+KCG  + D   +F ++   + VLWN 
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312

Query: 665 MLVGLAQHGN-GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           M+ G + + +  +E L+ F  ++  G  PD  + + V+SACS     S+  +  H +  K
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQ-VHGLALK 371

Query: 724 YGIEP-EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
             I    +   + L+    + G  ++A  L  +MP   + S +  + G
Sbjct: 372 LDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAG 419


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  338 bits (867), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 190/574 (33%), Positives = 304/574 (52%), Gaps = 46/574 (8%)

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
             T    L+++S LP  L   +Q+H  ++K  +  +  V T+L+ +Y R G +  A+ +F
Sbjct: 70  HLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVF 129

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +        +W A+I  Y+ + +  +A+ +  +   +G R D  T    + AC  +  L 
Sbjct: 130 DEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLA 189

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G+ +   A + G    + V++  +D+YVKCG M  A+ +F+ +   D VAW  M+ G  
Sbjct: 190 TGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYA 249

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG    AL ++  M+  GV PD +  A  + A + L AL+ GRQ    +   +   +P 
Sbjct: 250 SNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 309

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +G +L+DMYAKCG+  +A+++F+QM  ++ ++WNAM++GL   G+ +    L   M+  G
Sbjct: 310 LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG 369

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           V+ +  TFIG+L +C++TGL+ +    FH M + Y I P +EHY  +VD L RAG  +EA
Sbjct: 370 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA 429

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            +LI  MP  A+A +  ALLG C++  + E  + V  +L+ LEP++S  YV+LSNI++  
Sbjct: 430 HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNR 489

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
            +W+D    R +MK K V+K PA                       D I+ K++ L   +
Sbjct: 490 GRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 549

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           K  GY P T+ V+ DVE+EEKE  L +HSEKLA A+ L+ T P   I             
Sbjct: 550 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCH 609

Query: 894 --------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                   ++++E +    NRFH  RDG C C D
Sbjct: 610 TAIKLISRITHREIIVRDNNRFHCFRDGSCSCND 643



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 184/425 (43%), Gaps = 41/425 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  HAR L      +  +  +L+T+Y+RCG L  A+R+FD+MP    +SW +++ A
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +G+     + E   + R+   +       T   +L  C     +   ETV   A + 
Sbjct: 147 YMDAGD-----LREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQE 201

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+    FV+ A V++Y K G++ +A+ +FD M+++D V W  M+  YA NG   E   LF
Sbjct: 202 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 261

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNVVLWNKKLSGY 307
           + +   G+ PD  +V   L   + LG      +   AI+++ ++    N VL    +  Y
Sbjct: 262 LAMQAEGVRPDCYAVAGALSACTRLGAL---DLGRQAIRMVDWDEFLDNPVLGTALIDMY 318

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            + G    A   F  M + ++    + +   +  +  T +      + G   KSG     
Sbjct: 319 AKCGSTAEAWVVFQQMRKKDI----IVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK--- 371

Query: 368 IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +  N+ I +     C C   T    +    R   ++ +  H+S +I  +           
Sbjct: 372 LNDNTFIGLL----CSC---THTGLIQDGRRYFHNMTKLYHISPRIEHYG---------- 414

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHMHTS 486
               ++D+  R G + EA  L ++         NA+I G +L     H+  EL  H+ T 
Sbjct: 415 ---CIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGGCKIHRNAELAEHVLTQ 467

Query: 487 GERLD 491
             RL+
Sbjct: 468 LIRLE 472


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 200/577 (34%), Positives = 305/577 (52%), Gaps = 35/577 (6%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I +YS M    G+  D +T +++ +A S +       K   +  +    V+D FV+T ++
Sbjct: 86  IELYSNM-LFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIV 144

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D+Y + G M +A ++F+     D+  + A+I GY       +ALE+F  M  S  + +E 
Sbjct: 145 DMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEY 204

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T+A+ + +CG L  L  GK +H   +K G E  +   + +L MY KC  + D+  +FN +
Sbjct: 205 TLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSL 264

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
                V WT+ I G V NG E++ALS++ +M    + P+ FT + ++ A S L  LE G 
Sbjct: 265 AYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGE 324

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           QIHA  +KL    + FV  +L+ +Y KCGN+E A  +F  +   + V  N M+   AQ+G
Sbjct: 325 QIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNG 384

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
            G E L+LFE +K  G+EP+ VTFI +L AC+  GLV E  + F L+R  + IE   +HY
Sbjct: 385 FGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY 444

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + ++D LGRA R +EA  LI            R LL AC++ G+ E  +   +K++   P
Sbjct: 445 TCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAP 503

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------DL--- 834
            D   ++LL+NI+A+A +WD+V   +   +   +KK PA                DL   
Sbjct: 504 RDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHP 563

Query: 835 ----IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
               I   +  LI+++   GY PDT FVL D+EEE+K  ALYYHSEKLA A+ L  T   
Sbjct: 564 RAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGK 623

Query: 891 SVILSNKEPLY----------ANRFHHLRDGMCPCAD 917
           +  +   + L           A RFHH + G+C C D
Sbjct: 624 NTAIRIFKNLRVCGDYIIARDAKRFHHFKGGICSCKD 660



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 183/354 (51%), Gaps = 3/354 (0%)

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L A  +  + L   K +H H +K+ ++  SF    LID Y +   + EA  LF+      
Sbjct: 7   LIAQCTNKKSLTTLKSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLFDEMPNRH 65

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           + TWN+MI  ++    + +A+EL+S+M   G   D  T +   KA   + + ++G++ H 
Sbjct: 66  IVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHG 125

Query: 517 YAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
            A+  GFE+ D  V++GI+DMY K G M DA+ +F+ +   D V +T +I G   +G + 
Sbjct: 126 LAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDG 185

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            AL ++  M  S + P+E+T A ++ +   L  L  G+ IH  ++K    S      SL+
Sbjct: 186 EALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLL 245

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            MY+KC  +ED+  +F  +   + V W + +VGL Q+G  E  L +F +M    + P+  
Sbjct: 246 TMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHF 305

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           T   +L ACS   ++ EA E  H +  K G++      + L+   G+ G  ++A
Sbjct: 306 TLSSILHACSSLAML-EAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKA 358



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/560 (23%), Positives = 235/560 (41%), Gaps = 96/560 (17%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S++    +   L   KS H  IL S  +   F  + L+  Y +C  +  AR+LFD+MP
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +R +++WNS+++++   G+       E   L+ ++          T + + K     G  
Sbjct: 63  NRHIVTWNSMISSHVSRGK-----TKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVS 117

Query: 176 WASETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
              +  HG A+ +G  V D FV+  +V++Y+KFGK+++A+F+FD + ++DVVL+  ++  
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-------------KRHEEQV 281
           Y ++G   E   +F D+  S + P++ ++  VL    +LG             K   E V
Sbjct: 178 YNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESV 237

Query: 282 QAYAIKLLLYNNNSNV----------------VLWNKKLSGYLQVGDNHGAIECFVNMIR 325
            A    LL   +  N+                V W   + G +Q G    A+  F  M+R
Sbjct: 238 VASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMR 297

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
            ++  +  T    L A +    L  G+QIH  T+K G      V  +LI++Y K G V  
Sbjct: 298 CSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEK 357

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R       SV  + + L                     D      +I  Y +NG     
Sbjct: 358 AR-------SVFDSLTEL---------------------DIVSINTMIYAYAQNG----- 384

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
                              FG       H+ALELF  +   G   + +T  + + AC   
Sbjct: 385 -------------------FG-------HEALELFERLKKLGLEPNVVTFISILLACNNA 418

Query: 506 LMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            ++++G Q+ +    +   EL     + ++D+  +     +A  +  +   PD + W T+
Sbjct: 419 GLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTL 478

Query: 565 ISGCVDNGEEDLALSIYHQM 584
           ++ C  +GE ++A     +M
Sbjct: 479 LNACKIHGEVEMAEKFMKKM 498



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           K +H + +KSG  L       ++D Y+KC  + +A+ +F+++P    V W +MIS  V  
Sbjct: 21  KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS-SDPFV 630
           G+   A+ +Y  M   GV+PD +TF+ + KA S +    +G++ H   + L    SD FV
Sbjct: 80  GKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
              +VDMYAK G ++DA  +F ++  ++ VL+ A++VG  QHG   E L++FEDM    +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRI 199

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +P+  T   VL +C   G +    +  H +  KYG+E  V   + L+    +    +++ 
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNG-KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSI 258

Query: 751 ELILSMPFEASASMHRALLG 770
           ++  S+ + +  +    ++G
Sbjct: 259 KVFNSLAYASHVTWTSFIVG 278



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 27/235 (11%)

Query: 16  TYVIFSSFTKDTYRN------LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL 69
           ++V ++SF     +N      L  F   +   +  +HF+ SS       IL    S + L
Sbjct: 268 SHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSS-------ILHACSSLAML 320

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             G+  HA  +      ++F+   L+ +Y +CG++  AR +FD + + D++S N+++ AY
Sbjct: 321 EAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAY 380

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL--- 186
           A +G G+     E   LF  L++     + +T   +L  C ++G V   E    ++L   
Sbjct: 381 AQNGFGH-----EALELFERLKKLGLEPNVVTFISILLACNNAGLV--EEGCQIFSLIRN 433

Query: 187 --KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
              I L  D +    ++++  +  +  EA  L +  +  DV+ W+ +L A   +G
Sbjct: 434 NHSIELTRDHYT--CMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHG 486


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 205/605 (33%), Positives = 313/605 (51%), Gaps = 83/605 (13%)

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            TL        +L EG    KQ+H H IK       ++S  L+D+Y + GS+ +AE +F+
Sbjct: 123 LTLLKFCLKQRALKEG----KQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFD 177

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHM-----------------HTSGERLDEI 493
                DL +WN MI GY+   N  KA  LF  M                 H   E   E+
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALEL 237

Query: 494 ---------------TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
                          TI++A+ A   +  L  GK++H + M+ G + D  V   +LDMY 
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYG 297

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG++ +A+ IF+ +   D V+WTTMI   + NG  +   +++  +  S ++P++FTFA 
Sbjct: 298 KCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A + L A + G+QIHA ++++   S      +LV MY+KCG+IE+A  +F+ +   +
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPD 417

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
              W ++LVG AQHG  ++ L  FE +   G +PD + FIGVLSAC++ GLV +  E FH
Sbjct: 418 LFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFH 477

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            ++EK+G+   ++HY+ ++D L RAG+  EA  +I  MP +    +  ALLG CR+ G+ 
Sbjct: 478 SIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNL 537

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------- 831
           E  K  A+ L  +EP + + YV L+NI+A+A    +  + R  M  + + K P       
Sbjct: 538 ELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEI 597

Query: 832 ----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                           +  I   +  L KR+KE GYVPDT+FVL DVE E+KE  L YHS
Sbjct: 598 RREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHS 657

Query: 876 EKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGM 912
           EKLA A+G+ISTP  + I                     ++ ++ +   +NRFH    G 
Sbjct: 658 EKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGS 717

Query: 913 CPCAD 917
           C C D
Sbjct: 718 CSCKD 722



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 237/518 (45%), Gaps = 82/518 (15%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           +S + ++L+  +    L  GK  HA I  S  I   +++N L+ MY++CGSLV A ++FD
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSI-GLYISNRLLDMYAKCGSLVDAEKVFD 177

Query: 113 KMPDRDLISWNSILAAYAHSGE-----------GNAENVT---------------EGFRL 146
           +M  RDL SWN +++ Y   G             N +N +               E   L
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALEL 237

Query: 147 FRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           +R + +   + +++ T++  L    +   +   + +HG+ +++GL  DE V  +L+++Y 
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYG 297

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G I EA+++FD M+ERDVV W  M+  Y +NG  EE F LF  L  S + P+D +   
Sbjct: 298 KCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357

Query: 266 VLGVISDLGKRH-EEQVQAYAIK-------------LLLYNN-----NSNVVL------- 299
           VL   +DL      +Q+ AY ++             + +Y+      N+  V        
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPD 417

Query: 300 ---WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG----- 351
              W   L GY Q G +  A+  F  +++S  + D + F+  L+A A    ++ G     
Sbjct: 418 LFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFH 477

Query: 352 --QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG---LRTDQFTLASVLRASSSLPEG 406
             ++ HG T     Y+ +I   +    +++   +     ++ D++  A++L     +   
Sbjct: 478 SIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALL-GGCRIHGN 536

Query: 407 LHLSKQI--HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM- 463
           L L+K+    +  I+ +  A ++V+ A  ++Y   G  AE   + E  D   +     M 
Sbjct: 537 LELAKRAAKSLFEIEPENPA-TYVTLA--NIYASAGMRAEEANIRETMDSRGIVKKPGMS 593

Query: 464 -------IFGYILSNNSH-KALELFSHMHTSGERLDEI 493
                  +  + + +NSH K+ E+  ++    +R+ E+
Sbjct: 594 WIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEV 631



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 10/247 (4%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           N P  +L L   +QK  +S S+  +   ++   A   S L +GK  H  I+      D  
Sbjct: 229 NRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPS-LHMGKKIHGHIMRMGLDSDEV 287

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           +  +L+ MY +CGS+  AR +FDKM +RD++SW +++  Y  +G        EGF LFR 
Sbjct: 288 VWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRRE-----EGFALFRH 342

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA--LVNIYSKF 207
           L  S    +  T A +L  C         + +H Y +++G  +D F S A  LV++YSK 
Sbjct: 343 LMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG--FDSFSSAASALVHMYSKC 400

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G I  AK +F+ + + D+  W  +L  YA++G  ++  H F  L +SG  PD  +   VL
Sbjct: 401 GDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVL 460

Query: 268 GVISDLG 274
              +  G
Sbjct: 461 SACAHAG 467


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 257/942 (27%), Positives = 424/942 (45%), Gaps = 155/942 (16%)

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL-------TLAPLLKLCLS 171
           LI+   +         GNA   + G   FR L+E +             +   +L+LC  
Sbjct: 17  LIAAGKLEEDEEDDDAGNARKKSRG-EEFRELQEFLRIIDARDEPFDVDSYQHVLQLCTR 75

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +     VH +  +  +  + FV   LV +Y+ FG   EA+ +FDG+   +++ +  +
Sbjct: 76  LRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHNILSFTAI 135

Query: 232 LRAYAENGFGEE---VFHL-------------------------------FVD-LHRSGL 256
           +RAY   G  +E   + HL                               F D + R G 
Sbjct: 136 MRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGY 195

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
             D      ++G+ S+ G+  E  VQA+  +  L   +S+VV W K L+   +  D  GA
Sbjct: 196 DLDAGVAISLIGMYSNCGE-IEAAVQAFD-RAFLRAPSSDVVSWTKILAACNEHRDYIGA 253

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           ++ F  M    V  D + F+  L +V G  ++  G++IH   L        ++G +++ M
Sbjct: 254 LDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKM 313

Query: 377 YSKMGCV-------------------------C------------------GLRTDQFTL 393
           Y+++G +                         C                  G++ ++ T 
Sbjct: 314 YARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTF 373

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTV---ADSFVSTALIDVYCRNGSMAEAEYLFE 450
            ++L    +L   L   K+I   A +       A + + TA+I ++ R  SM  A   F+
Sbjct: 374 ITILDTCKNL--ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFD 431

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 +A + AMI GY  +    +AL +F  M       D + +A A+ AC  +  L++
Sbjct: 432 KISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEE 491

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GK +H  AM  G   D  V + ++DMY +CG+M DA ++F +I  PD +AW+ MI+    
Sbjct: 492 GKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALGR 551

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQIHANLIKLDCSSDPF 629
           +G+   A+++  +M+  G  P   T   ++ A +    +E+  R++H+ L+     SDP 
Sbjct: 552 HGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPE 611

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG---LAQHGNGEETLKLFEDMK 686
           V  +++ MYAK G+I++A   F +++  +   W  ML     L ++   +  LKL   M+
Sbjct: 612 VKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQ 671

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             GV PD VTF+ +L+AC+Y G + EA   F  M+  YG+ PE+EHY  LVD + R G  
Sbjct: 672 QDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYL 731

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM----ALEPFDSSAYVLL 802
           +EA +LI  +P + +  +  ALL  C+ Q D    + V E +M     L+P  + A+ + 
Sbjct: 732 QEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTGAHRV- 790

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADL-----------------------IFAKV 839
                 A +W++    R  M  + +KK+P                          I+A+V
Sbjct: 791 ------AARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEV 844

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK-- 897
           + +   IK+ GY+PDT +VL DV E++KER L+YHSE+LA AYG ++TPP   +   K  
Sbjct: 845 DRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNL 904

Query: 898 ---------EPLYAN------------RFHHL-RDGMCPCAD 917
                      LYA             RFHH  +DG C C D
Sbjct: 905 RVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGD 946



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 122/584 (20%), Positives = 229/584 (39%), Gaps = 88/584 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM----PDRDLISWN 123
           DL LG+  H  I       D  +  +L+ MYS CG +  A + FD+     P  D++SW 
Sbjct: 179 DLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWT 238

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
            ILAA          +      LF  +RE      R+    +L   +  G +   + +H 
Sbjct: 239 KILAAC-----NEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHS 293

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             L   L  D  +  A+V +Y++ G I++A   FD + +  V  W V++ AY   G    
Sbjct: 294 MVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNS 353

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK---------------- 287
           V  +   +   G+ P++ +   +L    +L     +++QA A +                
Sbjct: 354 VMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAV 413

Query: 288 LLLYNNNSNVVL---------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
           + +++  S+++L               +   ++GY        A+  F  MIR  V  D+
Sbjct: 414 IGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADN 473

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------- 383
           +   VA++A A   +L  G+ +H + +  G +   +V  +L++MYS+ G +         
Sbjct: 474 LVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGE 533

Query: 384 ----------------------------------CGLRTDQFTLASVLRASSSLPEGLHL 409
                                              G R    T+  VL A +        
Sbjct: 534 IERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEA 593

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++++H   +     +D  V  A++ +Y + GS+ EA   F+  +  D+  W  M+  Y  
Sbjct: 594 ARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCR 653

Query: 470 ---SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ-GKQMHAYAMKSGFEL 525
               N S +AL+L   M   G   D++T    + AC     L++ G+         G   
Sbjct: 654 LGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVP 713

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           ++     ++D   + G + +A+ +   +P   +++ W  ++  C
Sbjct: 714 EMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECC 757



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 9/199 (4%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S  DL  GK+ H   ++     D  +   L+ MYSRCGS+  A  +F ++   D I+W++
Sbjct: 485 SIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSA 544

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHG 183
           ++AA    G+           +   +++     +  T+  +L  C  +G +  A+  VH 
Sbjct: 545 MIAALGRHGDPRG-----AVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHS 599

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG---F 240
             +  G   D  V  A++ +Y+K G I+EA   FD ++  DV  W  ML AY   G    
Sbjct: 600 LLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNA 659

Query: 241 GEEVFHLFVDLHRSGLCPD 259
            +    L   + + G+ PD
Sbjct: 660 SDRALKLARMMQQDGVMPD 678


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 197/570 (34%), Positives = 305/570 (53%), Gaps = 48/570 (8%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS+L+ S  + + +   KQ+H    +     +  ++T L+++YC   S+  A  LF+   
Sbjct: 5   ASLLQ-SCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             +L  WN MI GY  +     A+ L+  M   G   D+ T    +KAC  L  +++GK+
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   ++SG E D+ V + ++DMY KCG +  A+ +F+ I   D V W +M++    NG+
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            D +L++   M  +G+ P E TF I + AS+    L QG+++H    +    S+  V  +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+DMYAK G++  A  LF+ ++ +  V WNAM+ G A HG+  E L LF++MK   V PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPD 302

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
            +TF+GVL+ACS+ GL++E   +F  M   + I P V+HY+ ++D LG  GR +EA +LI
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 754 LSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWD 813
           + M  E  A +  ALL +C++ G+ E G+   EKL+ LEP D   YV+LSN++A A +WD
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWD 422

Query: 814 DVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGG 850
            V   R  M  K +KK  A                       + I+A+++   K +KE G
Sbjct: 423 GVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAG 482

Query: 851 YVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK-----EPLY---- 901
           Y P    V  DVE++EK   +  HSE+LA A+GLIST   + +L  K     E  +    
Sbjct: 483 YAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIK 542

Query: 902 --------------ANRFHHLRDGMCPCAD 917
                          NR+HH +DG+C C D
Sbjct: 543 FISKITEREITIRDVNRYHHFKDGVCSCGD 572



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 36/339 (10%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S + S+L+  +    +  GK  HARI       +  L   L+ +Y  C SL  A  LFD+
Sbjct: 2   SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +  R+L  WN ++  YA +G            L+  +R+      + T   +LK C +  
Sbjct: 62  ISKRNLFLWNVMIRGYAWNGP-----YELAISLYYQMRDYGLVPDKFTFPFVLKACSALS 116

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   + +H   ++ GL  D FV  AL+++Y+K G +  A+ +FD + ERDVV W  ML 
Sbjct: 117 AMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLA 176

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK------------RH---- 277
            Y++NG  +E   L   +  +GL P + +    +   +D G             RH    
Sbjct: 177 TYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFES 236

Query: 278 EEQVQAYAIKLLLYNNNSN-------------VVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            ++V+   + +   + + N             VV WN  ++GY   G  + A++ F  M 
Sbjct: 237 NDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM- 295

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           +  V  D +TF+  LAA +    LN G ++H  ++ S F
Sbjct: 296 KGKVLPDHITFVGVLAACSHGGLLNEG-KMHFRSMISDF 333



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 152/332 (45%), Gaps = 57/332 (17%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+ LWN  + GY   G    AI  +  M    +  D  TF   L A +    +  G++IH
Sbjct: 66  NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGC----------------VC--------------- 384
              ++SG  S V VG +LI+MY+K GC                VC               
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185

Query: 385 ------------GLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVS 429
                       GL+  + T    + AS+    LP+G    K++H ++ ++   ++  V 
Sbjct: 186 ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQG----KELHGYSWRHGFESNDKVK 241

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TAL+D+Y ++GS+  A  LFE  +   + +WNAMI GY +  ++++AL+LF  M   G+ 
Sbjct: 242 TALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM--KGKV 299

Query: 490 L-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDA 546
           L D IT    + AC    +L +GK MH  +M S F +   V   + ++D+   CG + +A
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEA 358

Query: 547 QSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
             +  ++   PD   W  ++  C  +G  ++ 
Sbjct: 359 YKLIMEMRVEPDAGVWGALLHSCKIHGNVEMG 390



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 1/157 (0%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           +A L+++     A+E G+Q+HA + ++  S +P +   LV++Y  C ++ +A++LF ++ 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            RN  LWN M+ G A +G  E  + L+  M+ +G+ PD  TF  VL ACS    + E  +
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG-K 122

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
             H    + G+E +V   + L+D   + G  + A ++
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQV 159


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/554 (34%), Positives = 304/554 (54%), Gaps = 48/554 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K++  + + N    D ++   ++ ++ + G M +A  LF+     +  +W  +I GY+ S
Sbjct: 152 KRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDS 211

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            N  +A  LF  M          T AT ++A   L ++  G+Q+H+ A+K+G   D+ VS
Sbjct: 212 GNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVS 271

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMY KCG++ DA  +F+++P    V W ++I+G   +G  + AL +YH+MR SGV 
Sbjct: 272 CALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVK 331

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D FTF+I+++  S L ++ + +Q+HA+L++     D     +LVD Y+K G ++DA  +
Sbjct: 332 MDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHV 391

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M  RN + WNA++ G   HG+GEE + +FE M   G+ P+ VTF+ VLSACS +GL 
Sbjct: 392 FDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLF 451

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +E F  M   + ++P   H++ +++ LGR G   EA  LI   PF+ +A+M  ALL 
Sbjct: 452 ERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLR 511

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV G+ E GK+ AEKL  +EP   S Y++L NI+ ++ +  +       +KRK ++  
Sbjct: 512 ACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRML 571

Query: 831 PA-----------------------DLIFAKVEGLIKRIKEGGYVPD-TDFVLLDVEEEE 866
           PA                       + +  KV+ L+  I + GYVP+  +F+L DV+E E
Sbjct: 572 PACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENE 631

Query: 867 KERALYYHSEKLARAYGLIST---PPSSVI------------------LSNKEPLY--AN 903
            E+   YHSEKLA AYGL++T    P  ++                  ++ +E +   A+
Sbjct: 632 -EKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDAS 690

Query: 904 RFHHLRDGMCPCAD 917
           RFHH RDG C C D
Sbjct: 691 RFHHFRDGSCSCGD 704



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 158/284 (55%), Gaps = 4/284 (1%)

Query: 468 ILSNNSHKALELFSHMH-TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           +L      ALE+F       G  +   T    + AC  L  ++  K++  Y + +GFE D
Sbjct: 107 VLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPD 166

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             + + +L M+VKCG M+DA  +F+++PA + V+W T+ISG VD+G    A  ++  MR 
Sbjct: 167 QYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMRE 226

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
                   TFA +++AS+ L  +  GRQ+H+  IK     D FV  +L+DMY+KCG++ED
Sbjct: 227 EFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLED 286

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A+ +F +M  +  V WN+++ G A HG  EE L L+ +M+  GV+ D  TF  ++  CS 
Sbjct: 287 AHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSR 346

Query: 707 TGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
              V+ A + +  L+R  +G+  +V   + LVD   + G+  +A
Sbjct: 347 LASVARAKQVHASLVRNGFGL--DVVANTALVDFYSKWGKVDDA 388



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 34/298 (11%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           PD+++ N ++ M+ +CG ++ A RLFD+MP R+ +SW +I++ Y  SG     N  E FR
Sbjct: 165 PDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSG-----NYVEAFR 219

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           LF  +RE        T A +++       ++    +H  A+K GL  D FVS AL+++YS
Sbjct: 220 LFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYS 279

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G + +A  +FD M ++ +V W  ++  YA +G+ EE   L+ ++  SG+  D  +   
Sbjct: 280 KCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSI 339

Query: 266 VLGVISDLGK-RHEEQVQAYAIK----LLLYNNNS------------------------N 296
           ++ + S L      +QV A  ++    L +  N +                        N
Sbjct: 340 IIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRN 399

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           ++ WN  ++GY   G    AI+ F  M+R  +  + VTFL  L+A + +     G +I
Sbjct: 400 IISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEI 457



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +++R +     +  G+  H+  + +    D F++  L+ MYS+CGSL  A  +FD+MPD+
Sbjct: 238 TMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDK 297

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++ WNSI+A YA  G        E   L+  +R+S       T + ++++C     V  
Sbjct: 298 TIVGWNSIIAGYALHGYSE-----EALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVAR 352

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           ++ VH   ++ G   D   + ALV+ YSK+GK+ +A+ +FD M  R+++ W  ++  Y  
Sbjct: 353 AKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN 412

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV--ISDLGKRHEEQVQA 283
           +G GEE   +F  + R G+ P+  +   VL    IS L +R  E  Q+
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQS 460



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 66/359 (18%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N V W   +SGY+  G+   A   F+ M          TF   + A AG + +  G+Q+H
Sbjct: 197 NAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLH 256

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG------CV-------------------------- 383
              +K+G    + V  +LI+MYSK G      CV                          
Sbjct: 257 SCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSE 316

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ D FT + ++R  S L   +  +KQ+H   ++N    D   +TAL
Sbjct: 317 EALDLYHEMRDSGVKMDHFTFSIIIRICSRLA-SVARAKQVHASLVRNGFGLDVVANTAL 375

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D Y + G + +A ++F+     ++ +WNA+I GY    +  +A+++F  M   G   + 
Sbjct: 376 VDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNH 435

Query: 493 ITIATAVKACGCLLMLKQG----------KQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           +T    + AC    + ++G           ++   AM     ++L    G+LD       
Sbjct: 436 VTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLD------- 488

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             +A ++    P  P    W  ++  C  +G  +L L  +   +L G+ P++ +  I++
Sbjct: 489 --EAYALIRKAPFQPTANMWAALLRACRVHG--NLELGKFAAEKLYGMEPEKLSNYIVL 543



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 35/255 (13%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   L+  C+    +   + +  Y +  G   D+++   ++ ++ K G + +A  LFD M
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFV----DLHRSGLCPDDESVQCVLGVISDLGKR 276
             R+ V W  ++  Y ++G   E F LF+    + +  G       ++   G+      R
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253

Query: 277 HEEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYL 308
              Q+ + AIK  L  +                            +  +V WN  ++GY 
Sbjct: 254 ---QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYA 310

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
             G +  A++ +  M  S V+ D  TF + +   +   ++   +Q+H + +++GF   V+
Sbjct: 311 LHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVV 370

Query: 369 VGNSLINMYSKMGCV 383
              +L++ YSK G V
Sbjct: 371 ANTALVDFYSKWGKV 385


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 191/552 (34%), Positives = 299/552 (54%), Gaps = 47/552 (8%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH   IK+   +D F+   L+ +Y + G   +A+ LF+     DL +WN+++ G      
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 473 SHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               L  F  M T SG + +E+T+ + V AC  +  L +GK +H   +K G      V +
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +++MY K G +  A  +F ++P    V+W +M+     NG  +  + +++ M+ +G+ P
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D+ T   L++A +      Q   IHA + +   ++D  +  +L+++YAK G +  +  +F
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           +++  R+T+ W AML G A H  G E +KLF+ M   GVE D VTF  +LSACS++GLV 
Sbjct: 401 EEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 460

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  + F +M E Y +EP ++HYS +VD LGR+GR ++A ELI SMP E S+ +  ALLGA
Sbjct: 461 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 520

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CRV G+ E GK VAE+L++L+P D   Y++LSNI++AA  W   +  R  MK + + ++P
Sbjct: 521 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNP 580

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  +D I  K+E LI++I E G  P T+FVL D++EE K 
Sbjct: 581 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKV 640

Query: 869 RALYYHSEKLARAYGLI---------------------STPPSSVILSNKEPLY--ANRF 905
             +  HSEKLA A+GL+                     ST   + +L  +  +   + RF
Sbjct: 641 DMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRF 700

Query: 906 HHLRDGMCPCAD 917
           HH  DG+C C D
Sbjct: 701 HHFADGLCSCRD 712



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 205/432 (47%), Gaps = 54/432 (12%)

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------- 381
           A++   +++    IH   +KS  YS   +G+ L++MY K+G                   
Sbjct: 148 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVS 207

Query: 382 ----------------CV---CGLRTD------QFTLASVLRASSSLPEGLHLSKQIHVH 416
                           C+   C +RT+      + TL SV+ A + +   L   K +H  
Sbjct: 208 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXM-GALDEGKSLHGV 266

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            +K      + V  +LI++Y + G +  A  LFE      L +WN+M+  +  +  + K 
Sbjct: 267 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 326

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           ++LF+ M  +G   D+ T+   ++AC    + +Q + +HAY  + GF  D+ +++ +L++
Sbjct: 327 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 386

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y K G +  ++ IF +I   D +AWT M++G   +     A+ ++  M   GV  D  TF
Sbjct: 387 YAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 446

Query: 597 AILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
             L+ A S    +E+G+   +I + + +++   D +    +VD+  + G +EDAY L K 
Sbjct: 447 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS--CMVDLLGRSGRLEDAYELIKS 504

Query: 654 MDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVS 711
           M M  ++ +W A+L     +GN E   ++ E + +  ++P D   +I + +  S  GL  
Sbjct: 505 MPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGLWR 562

Query: 712 EAYENFHLMREK 723
            A +   LM+E+
Sbjct: 563 XASKVRXLMKER 574



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 173/375 (46%), Gaps = 39/375 (10%)

Query: 8   NLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTS 67
            + P    T   F + + D+ R        +  FL K H SS  + S   S++    S +
Sbjct: 100 TIAPSRFGTLTSFPNSSNDSTRT------KVAVFLGKLHNSSLLADSIVQSLVFAISSCT 153

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
            +    + HAR++ S    D F+ + L++MY + G    A+RLFD+MP+RDL+SWNS+++
Sbjct: 154 SVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMS 213

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
               SG G        F   R+  ES    + +TL  ++  C   G +   +++HG  +K
Sbjct: 214 GL--SGRGYLGACLNAFCRMRT--ESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVK 269

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G+     V  +L+N+Y K G +  A  LF+ M  R +V W  M+  +  NG+ E+   L
Sbjct: 270 LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDL 329

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAY------------AIKLL-LYN- 292
           F  + R+G+ PD  ++  +L   +D G  R  E + AY            A  LL LY  
Sbjct: 330 FNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 389

Query: 293 --------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                          + + + W   L+GY        AI+ F  M++  V+ D VTF   
Sbjct: 390 LGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHL 449

Query: 339 LAAVAGTDNLNLGQQ 353
           L+A + +  +  G++
Sbjct: 450 LSACSHSGLVEEGKK 464



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 14/204 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR    T      +S HA I       D  +   L+ +Y++ G L  +  +F+++ DR
Sbjct: 347 ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 406

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D I+W ++LA YA    G      E  +LF  + +       +T   LL  C  SG V  
Sbjct: 407 DTIAWTAMLAGYAVHACGR-----EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 461

Query: 178 SET---VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML- 232
            +    +     ++    D +    +V++  + G++ +A  L   M  E    +W  +L 
Sbjct: 462 GKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 519

Query: 233 --RAYAENGFGEEVFHLFVDLHRS 254
             R Y     G+EV    + L  S
Sbjct: 520 ACRVYGNVELGKEVAEQLLSLDPS 543


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 215/717 (29%), Positives = 345/717 (48%), Gaps = 95/717 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN----VQYDSVTFLVALAAVAGTDNLNLG 351
           N V WN  +  +   G +  +      M+  N       D  T +  L   A    + LG
Sbjct: 2   NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT----------------------- 388
           + +HG  +K      +++ N+L++MYSK GC+   +                        
Sbjct: 62  KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121

Query: 389 -DQFTLASVLRAS---------------SSLPEGLHLS-----KQIHVHAIKNDTVADSF 427
            D      VLR                 +++P   H S     K++H +++K + V +  
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V+ A +  Y + GS++ A+ +F       + +WNA+I G+  SN+   +L+    M  SG
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 241

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              D  T+ + + AC  L  L+ GK++H + +++  E DL V   +L +Y+ CG +   Q
Sbjct: 242 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 301

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           ++F+ +     V+W T+I+G + NG  D AL ++ QM L G+     +   +  A S L 
Sbjct: 302 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 361

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           +L  GR+ HA  +K     D F+  SL+DMYAK G+I  +  +F  +  ++T  WNAM++
Sbjct: 362 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 421

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G   HG  +E +KLFE+M+  G  PD +TF+GVL+AC+++GL+ E       M+  +G++
Sbjct: 422 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 481

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELIL-SMPFEASASMHRALLGACRVQGDTETGKWVAE 786
           P ++HY+ ++D LGRAG+  +A  ++   M  EA   + ++LL +CR+  + E G+ VA 
Sbjct: 482 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 541

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFAKV 839
           KL  LEP     YVLLSN++A   +W+DV   R  M   +++KD           +F+ V
Sbjct: 542 KLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 601

Query: 840 EG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
            G                L  +I + GY PDT  V  D+ EEEK   L  HSEKLA  YG
Sbjct: 602 VGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYG 661

Query: 884 LISTPPSSVI-----------LSNKEPLYA------------NRFHHLRDGMCPCAD 917
           LI T   + I             N   L +             RFHH ++G+C C D
Sbjct: 662 LIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGD 718



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 157/597 (26%), Positives = 252/597 (42%), Gaps = 117/597 (19%)

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHR----SGLCPDDESVQCVLGVIS-----DL 273
           R+ V W  M+R +++NGF EE F L  ++          PD  ++  VL V +      L
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 274 GKRHEEQVQAYAIKLLL----------------------------YNNNSNVVLWNKKLS 305
           GK     V  +A+KL L                             NNN NVV WN  + 
Sbjct: 61  GK----GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 116

Query: 306 GYLQVGDNHGAIECFVNMIR--SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           G+   GD HG  +    M+    +V+ D VT L A+        L   +++H  +LK  F
Sbjct: 117 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 176

Query: 364 YSAVIVGNSLINMYSKMGC----------------------------------------- 382
               +V N+ +  Y+K G                                          
Sbjct: 177 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 383 --VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
             + GL  D FT+ S+L A S L + L L K++H   I+N    D FV  +++ +Y   G
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKL-KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            +   + LF+  +   L +WN +I GY+ +    +AL +F  M   G +L  I++     
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  L  L+ G++ HAYA+K   E D  ++  ++DMY K G++  +  +FN +      +
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  MI G   +G    A+ ++ +M+ +G  PD+ TF         LTA      IH  L 
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL------GVLTACNHSGLIHEGLR 469

Query: 621 KLDCSSDPFVGIS--------LVDMYAKCGNIEDAY-ILFKQMDMRNTV-LWNAMLVGLA 670
            LD     F G+         ++DM  + G ++ A  ++ ++M     V +W ++L    
Sbjct: 470 YLDQMKSSF-GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 528

Query: 671 QHGN---GEET-LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            H N   GE+   KLFE      +EP+      +LS   Y GL    +E+   +R++
Sbjct: 529 IHQNLEMGEKVAAKLFE------LEPEKPENYVLLSNL-YAGL--GKWEDVRKVRQR 576



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 135/621 (21%), Positives = 255/621 (41%), Gaps = 125/621 (20%)

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES----ITFTSRLTLAPLLKLCLSS 172
           R+ +SWNS++  ++ +G        E F L   + E            TL  +L +C   
Sbjct: 1   RNFVSWNSMIRVFSDNGFSE-----ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 55

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   + VHG+A+K+ L  +  ++ AL+++YSK G I  A+ +F     ++VV W  M+
Sbjct: 56  REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 115

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV--------ISDLGKRHEEQVQ-- 282
             ++  G     F +   +   G     + V  +  V        +  L + H   ++  
Sbjct: 116 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 175

Query: 283 ---------------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
                                +YA ++     +  V  WN  + G+ Q  D   +++  +
Sbjct: 176 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 235

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M  S +  DS T    L+A +   +L LG+++HG  +++     + V  S++++Y   G
Sbjct: 236 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295

Query: 382 CVC-------------------------------------------GLRTDQFTLASVLR 398
            +C                                           G++    ++  V  
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A S LP  L L ++ H +A+K+    D+F++ +LID+Y +NGS+ ++  +F        A
Sbjct: 356 ACSLLPS-LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 414

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           +WNAMI GY +   + +A++LF  M  +G   D++T    + AC    ++ +G + +   
Sbjct: 415 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR-YLDQ 473

Query: 519 MKSGFEL--DLCVSSGILDMYVKCGAMVDA-QSIFNDIPAPDDVA-WTTMISGCVDNGEE 574
           MKS F L  +L   + ++DM  + G +  A + +  ++    DV  W +++S C      
Sbjct: 474 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR----- 528

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
                  HQ                         LE G ++ A L +L+    P   + L
Sbjct: 529 ------IHQ------------------------NLEMGEKVAAKLFELE-PEKPENYVLL 557

Query: 635 VDMYAKCGNIEDAYILFKQMD 655
            ++YA  G  ED   + ++M+
Sbjct: 558 SNLYAGLGKWEDVRKVRQRMN 578



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 32/342 (9%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H   +      +  L N LM MYS+CG +  A+ +F    +++++SWN+++  + 
Sbjct: 60  LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF- 118

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            S EG+     +  R   +  E +     +T+   + +C    ++ + + +H Y+LK   
Sbjct: 119 -SAEGDTHGTFDVLRQMLAGGEDVK-ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 176

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           V++E V+ A V  Y+K G +  A+ +F G++ + V  W  ++  +A++          + 
Sbjct: 177 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------LLLY------------ 291
           +  SGL PD  +V  +L   S L   R  ++V  + I+      L +Y            
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296

Query: 292 ----------NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                       + ++V WN  ++GYLQ G    A+  F  M+   +Q   ++ +    A
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 356

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            +   +L LG++ H   LK        +  SLI+MY+K G +
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 398



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 11/224 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LGK  H  I+ +    D F+  +++++Y  CG L   + LFD M D+
Sbjct: 251 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 310

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL---TLAPLLKLCLSSGY 174
            L+SWN+++  Y  +G  +        R     R+ + +  +L   ++ P+   C     
Sbjct: 311 SLVSWNTVITGYLQNGFPD--------RALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 362

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +      H YALK  L  D F++ +L+++Y+K G I ++  +F+G++E+    W  M+  
Sbjct: 363 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 422

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           Y  +G  +E   LF ++ R+G  PDD +   VL   +  G  HE
Sbjct: 423 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHE 466


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 250/891 (28%), Positives = 412/891 (46%), Gaps = 128/891 (14%)

Query: 114 MPDRDLISWNSILAAYAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           MP R   SW + ++  A  G E  A      F L R +RE     S   LA L+  C   
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTA------FTLLRVMRERDVPLSGFALASLVTACEHR 54

Query: 173 GY---VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
           G+         +H    + GL+ + ++  AL+++Y   G +  A+ LF  M +R+VV W 
Sbjct: 55  GWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWT 114

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE----QVQAYA 285
            ++ A + NG  EE    +  + + G+  +  ++     V+S  G   +E    QV A+ 
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALA---TVVSLCGALEDEVAGLQVTAHV 171

Query: 286 I--KLLLYNNNSNVVL--------------------------WNKKLSGYLQVGDNHGAI 317
           +   LL + + +N ++                          WN  +S Y     +H  +
Sbjct: 172 VVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMY-----SHEEV 226

Query: 318 --ECFV---NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             +CF+   +M    V+ D  T    ++  A +D + LG  IH   + SG + +V + N+
Sbjct: 227 YSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA 286

Query: 373 LINMYSKMG--------------------------------CVCGLRT------------ 388
           L+NMYS  G                                CV  L T            
Sbjct: 287 LVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPP 346

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +  T +S L A SS PE L   + IH   ++        +  +L+ +Y +  SM + E +
Sbjct: 347 NSMTFSSALGACSS-PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERV 405

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE+   +D+ + N +  GY    +   A+ +FS M  +G + + IT+      C  L  L
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDL 465

Query: 509 KQ-GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
              G  +HAY  ++G   D  +++ ++ MY  CG +  +  IF+ I     ++W  +I+ 
Sbjct: 466 HSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAA 525

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCS 625
            V +G  + A+ ++   + +G   D F  A  + +S+ L +LE+G Q+H   +K  LDC 
Sbjct: 526 NVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDC- 584

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D  V  + +DMY KCG ++           R T  WN ++ G A++G  +E    F+ M
Sbjct: 585 -DSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHM 643

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
            + G +PD VTF+ +LSACS+ GL+ +  + ++ M   +G+ P ++H   +VD LGR G+
Sbjct: 644 VSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGK 703

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA + I  MP   +  + R+LL + R   + + G+  A+ L+ L+PFD SAYVLLSN+
Sbjct: 704 FAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNL 763

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
           +A   +W DV   R  MK   + K P                       A+ I+ K++ +
Sbjct: 764 YATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEI 823

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
           + +++E GYV DT   L D +EE+KE  L+ HSEKLA AYGL+  P  S I
Sbjct: 824 LLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTI 874



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 150/688 (21%), Positives = 291/688 (42%), Gaps = 100/688 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G + HA    +  + + ++   L+ +Y   G ++ A+RLF +MP R+++SW +I+ A + 
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G      + E    +R +R+     +   LA ++ LC +     A   V  + +  GL+
Sbjct: 123 NG-----CMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V+ +L+ ++    ++++A+ LFD M+ERD + W  M+  Y+      + F +  D+
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 252 HRSGLCPD----------------------------DESVQCVLGVISDLGKRHEEQVQA 283
               + PD                               + C + +I+ L   +    + 
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 284 YAIKLLLYN-NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV-QYDSVTFLVALAA 341
              + L  N +  +V+ WN  +S Y+Q      A+E    +++++    +S+TF  AL A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------MGCV----- 383
            +  + L  G+ IH   L+    + +++GNSL+ MYSK             M C      
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 384 -------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                     G++ +  T+ ++     SL +       +H +  
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           +   ++D +++ +LI +Y   G +  +  +F   +   + +WNA+I   +      +A++
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIK 537

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF     +G +LD   +A  + +   L  L++G Q+H  ++K+G + D  V +  +DMY 
Sbjct: 538 LFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYG 597

Query: 539 KCGAMVDAQSIFNDIPAP---DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           KCG M     +   +P P       W T+ISG    G    A   +  M   G  PD  T
Sbjct: 598 KCGKM---DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVT 654

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LVDMYAKCGNIEDA 647
           F  L+ A S    +++G   + ++        P  G+S        +VD+  + G   +A
Sbjct: 655 FVALLSACSHAGLIDKGMDYYNSMA-------PTFGVSPGIKHCVCIVDLLGRLGKFAEA 707

Query: 648 YILFKQMD-MRNTVLWNAMLVGLAQHGN 674
                +M  + N ++W ++L     H N
Sbjct: 708 EKFIDEMPVLPNDLIWRSLLSSSRTHKN 735



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 235/582 (40%), Gaps = 96/582 (16%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D + G    A ++ S  +    + N+L+TM+     +  A RLFD+M +RD ISWN++++
Sbjct: 160 DEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMIS 219

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y+H      E  ++ F +   +R         TL  L+ +C SS  V     +H   + 
Sbjct: 220 MYSHE-----EVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVS 274

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            GL     +  ALVN+YS  GK+ EA+ LF  M  RDV+ W  M+ +Y ++    E    
Sbjct: 275 SGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALET 334

Query: 248 FVDLHRS--------------GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
              L ++              G C   E++     + + + +R  + V      LL   +
Sbjct: 335 LGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYS 394

Query: 294 NSN----------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
             N                VV  N    GY  + D   A+  F  M  + ++ + +T + 
Sbjct: 395 KCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMIN 454

Query: 338 ALAAVAGTDNLN-LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------- 383
                    +L+  G  +H    ++G  S   + NSLI MY+  G +             
Sbjct: 455 LQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK 514

Query: 384 ------------------------------CGLRTDQFTLASVLRAS---SSLPEGLHLS 410
                                          G + D+F LA  L +S   +SL EG+   
Sbjct: 515 SVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGM--- 571

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            Q+H  ++KN    DS V  A +D+Y + G M        +        WN +I GY   
Sbjct: 572 -QLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARY 630

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFEL 525
               +A + F HM + G++ D +T    + AC    ++ +G   +      + +  G + 
Sbjct: 631 GYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKH 690

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMIS 566
            +C    I+D+  + G   +A+   +++P  P+D+ W +++S
Sbjct: 691 CVC----IVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 38/323 (11%)

Query: 53  SSQWFSILRHAISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S  FS    A S+ + L+ G++ HA IL  S      + N+L+TMYS+C S+    R+F
Sbjct: 347 NSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVF 406

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           + MP  D++S N +   YA       E+V    R+F  +R +    + +T+  L   C S
Sbjct: 407 ESMPCYDVVSCNVLTGGYA-----ALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKS 461

Query: 172 SGYVWA-SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
            G + +    +H Y  + GL+ DE+++ +L+ +Y+  G +  +  +F  +  + V+ W  
Sbjct: 462 LGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNA 521

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLL 289
           ++ A   +G GEE   LF+D   +G   D   +   L   ++L    E  Q+   ++K  
Sbjct: 522 IIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNG 581

Query: 290 LYNNNSNVV-----------------------------LWNKKLSGYLQVGDNHGAIECF 320
           L + +S+VV                              WN  +SGY + G    A + F
Sbjct: 582 L-DCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTF 640

Query: 321 VNMIRSNVQYDSVTFLVALAAVA 343
            +M+    + D VTF+  L+A +
Sbjct: 641 KHMVSVGQKPDYVTFVALLSACS 663


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 181/507 (35%), Positives = 292/507 (57%), Gaps = 24/507 (4%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +++IH H   +    D+F+  +LI +YC+ GS+ EA  +F+     D+ +W ++I GY  
Sbjct: 70  ARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQ 129

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++   +A+ L   M     + +  T A+ +KA G       G Q+HA A+K  +  D+ V
Sbjct: 130 NDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYV 189

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S +LDMY +CG M  A ++F+ + + + V+W  +ISG    G+ + AL ++ +M+ +G 
Sbjct: 190 GSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGF 249

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FT++ +  A + + ALEQG+ +HA++IK       FVG +++DMYAK G++ DA  
Sbjct: 250 EATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARK 309

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F+++  ++ V WN+ML   AQ+G G+E +  FE+M+  G+  + ++F+ +L+ACS+ GL
Sbjct: 310 VFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGL 369

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E    F +++E Y +EPE+EHY  +VD LGRAG    A   I  MP E +A++  ALL
Sbjct: 370 VKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALL 428

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            ACR+  + + G++ A+ +  L+P DS   VLL NI+A+   WD     R  MK   VKK
Sbjct: 429 AACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKK 488

Query: 830 DPA----------------DLIFAKVEGLIK-------RIKEGGYVPDTDFVLLDVEEEE 866
           +PA                D    + E + K       +I++ GYVPD D+VLL V+E+E
Sbjct: 489 EPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQE 548

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI 893
           +E  L YHSEK+A A+ LI  P  + I
Sbjct: 549 REANLQYHSEKIALAFALIQMPAGATI 575



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 126/226 (55%), Gaps = 1/226 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L   +++HA+   S F  D  + + ++ +Y KCG++V+A  +F+ +   D 
Sbjct: 58  ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WT++I+G   N     A+ +   M      P+ FTFA L+KA         G QIHA 
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHAL 177

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            +K D   D +VG +L+DMYA+CG ++ A  +F ++D +N V WNA++ G A+ G+GE  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREK 723
           L +F +M+ +G E    T+  + SA +  G + +  + + H+++ +
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSR 283



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 45/320 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            +  HA + +S    D FL N+L+ +Y +CGS+V A ++FDKM ++D++SW S++A YA 
Sbjct: 70  ARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQ 129

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     +   E   L   + +     +  T A LLK   +         +H  A+K    
Sbjct: 130 N-----DMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWH 184

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D +V  AL+++Y++ GK+  A  +FD +  ++ V W  ++  +A  G GE    +F ++
Sbjct: 185 EDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEM 244

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYNN---- 293
            R+G      +   +   ++ +G   + + V A+ IK             L +Y      
Sbjct: 245 QRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSM 304

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                      N ++V WN  L+ + Q G    A+  F  M +S +  + ++FL  L A 
Sbjct: 305 IDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTAC 364

Query: 343 AGTDNLNLGQQIHGTTLKSG 362
           +           HG  +K G
Sbjct: 365 S-----------HGGLVKEG 373



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 134/263 (50%), Gaps = 12/263 (4%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           ++P+ ++ LLP + K  F  +  +  + S+L+   + +D  +G   HA  +      D +
Sbjct: 131 DMPAEAIGLLPGMLKGRFKPNGFT--FASLLKAVGAYADSGIGGQIHALAVKCDWHEDVY 188

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + + L+ MY+RCG +  A  +FDK+  ++ +SWN++++ +A  G+G          +F  
Sbjct: 189 VGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGET-----ALMVFAE 243

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++ +    +  T + +       G +   + VH + +K       FV   ++++Y+K G 
Sbjct: 244 MQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGS 303

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-- 267
           + +A+ +F+ +  +D+V W  ML A+A+ G G+E    F ++ +SG+  +  S  C+L  
Sbjct: 304 MIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTA 363

Query: 268 ---GVISDLGKRHEEQVQAYAIK 287
              G +   GK + + ++ Y ++
Sbjct: 364 CSHGGLVKEGKHYFDMIKEYNLE 386



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 136/332 (40%), Gaps = 48/332 (14%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            +  C  S  +  +  +H +        D F+  +L+++Y K G + EA  +FD M+ +D
Sbjct: 57  FITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKD 116

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQV 281
           +V W  ++  YA+N    E   L   + +    P+  +   +L   G  +D G     Q+
Sbjct: 117 MVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGI--GGQI 174

Query: 282 QAYAIK-------------LLLYN---------------NNSNVVLWNKKLSGYLQVGDN 313
            A A+K             L +Y                ++ N V WN  +SG+ + GD 
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  F  M R+  +    T+    +A+AG   L  G+ +H   +KS       VGN++
Sbjct: 235 ETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTM 294

Query: 374 INMYSKMGCVCGLR--------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           ++MY+K G +   R         D  T  S+L A +    GL      H   ++   +  
Sbjct: 295 LDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQY--GLGKEAVSHFEEMRKSGIYL 352

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           + +S   I   C +G + +     E K  FD+
Sbjct: 353 NQISFLCILTACSHGGLVK-----EGKHYFDM 379



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 29/234 (12%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
            + +HF+ SS     FS L        L  GK  HA ++ S Q    F+ N ++ MY++ 
Sbjct: 249 FEATHFTYSSI----FSAL---AGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKS 301

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           GS++ AR++F+++ ++DL++WNS+L A+A  G G      E    F  +R+S  + ++++
Sbjct: 302 GSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGK-----EAVSHFEEMRKSGIYLNQIS 356

Query: 162 LAPLLKLCLSSGYVWAS----ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFL 216
              +L  C   G V       + +  Y L+  +  + +V+  +V++  + G +  A  F+
Sbjct: 357 FLCILTACSHGGLVKEGKHYFDMIKEYNLEPEI--EHYVT--VVDLLGRAGLLNYALVFI 412

Query: 217 FDGMQERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           F    E    +W  +L   R +     G+     F   H   L PDD     +L
Sbjct: 413 FKMPMEPTAAVWGALLAACRMHKNAKVGQ-----FAADHVFQLDPDDSGPPVLL 461



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 10/223 (4%)

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P    +   + A +    L+  R+IHA+L     + D F+  SL+ +Y KCG++ +A+
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY-- 706
            +F +M  ++ V W +++ G AQ+    E + L   M     +P+  TF  +L A     
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166

Query: 707 -TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
            +G+  +     H +  K     +V   S L+D   R G+   A  +   +  +   S +
Sbjct: 167 DSGIGGQ----IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
             + G  R +GD ET   V  + M    F+++ +   S+IF+A
Sbjct: 223 ALISGFAR-KGDGETALMVFAE-MQRNGFEATHFT-YSSIFSA 262


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 186/569 (32%), Positives = 309/569 (54%), Gaps = 48/569 (8%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           + S+L+A ++  + + L + +H   +K      +     L+D+Y + G +  A  +F+  
Sbjct: 1   MVSILQACANCGD-VSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM 59

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
               + TW ++I  Y     S +A+ LF  M   G   D  TI T + AC C   L+ GK
Sbjct: 60  SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +H Y  ++  + ++ V + ++DMY KCG+M DA S+F ++P  D ++W TMI G   N 
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
             + ALS++  M L  + PD  T A ++ A + L +L++G+++H ++++    SD  V  
Sbjct: 180 LPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           +LVDMY KCG    A +LF  +  ++ + W  M+ G   HG G   +  F +M+  G+EP
Sbjct: 239 ALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
           D V+FI +L ACS++GL+ E +  F++M+++  ++P++EHY+ +VD L R+G+   A + 
Sbjct: 299 DEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
           I SMP E  A++  ALL  CR+  D +  + VAE +  LEP ++  YVLL+N +A A +W
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKW 418

Query: 813 DDVTSARGEMKRKNVKKDPA----------DLIFA---------KVEGLIKRI----KEG 849
           ++V   R ++ R+ +KK+P            +  A         K+E L+KR+    KE 
Sbjct: 419 EEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEE 478

Query: 850 GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-------- 901
           GY P T + L++ +  +KE AL  HSEKLA A+G+++ PP+  I  +K            
Sbjct: 479 GYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMA 538

Query: 902 ---------------ANRFHHLRDGMCPC 915
                          +NRFHH +DG+C C
Sbjct: 539 KFISKTLGREIVLRDSNRFHHFKDGVCCC 567



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 6/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L        L  GK  H  I  +    + F+ N LM MY++CGS+  A  +F +MP +
Sbjct: 104 TVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK 163

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ISWN+++  Y+ +   N     E   LF  +   +      TLA +L  C S   +  
Sbjct: 164 DIISWNTMIGGYSKNSLPN-----EALSLFGDMVLEMK-PDGTTLACILPACASLASLDR 217

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VHG+ L+ G   D+ V+ ALV++Y K G    A+ LFD +  +D++ W VM+  Y  
Sbjct: 218 GKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGM 277

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +GFG      F ++ ++G+ PD+ S   +L   S  G
Sbjct: 278 HGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSG 314



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 148/323 (45%), Gaps = 35/323 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+   +  D+ LG++ H   + +         N L+ MY++CG L  A  +FD M  R
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            +++W S++AAYA  G  +     E  RLF  +          T+  +L  C  +G +  
Sbjct: 63  TVVTWTSLIAAYAREGLSD-----EAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN 117

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH Y  +  +  + FV  AL+++Y+K G + +A  +F  M  +D++ W  M+  Y++
Sbjct: 118 GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-----------HEEQV 281
           N    E   LF D+    + PD  ++ C+L   +     D GK             ++QV
Sbjct: 178 NSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV 236

Query: 282 QAYAIKL-----------LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               + +           LL++     +++ W   ++GY   G  + AI  F  M ++ +
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296

Query: 329 QYDSVTFLVALAAVAGTDNLNLG 351
           + D V+F+  L A + +  L+ G
Sbjct: 297 EPDEVSFISILYACSHSGLLDEG 319



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 30/249 (12%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +  +L+ C + G V     VHG  +K  + W       L+++Y+K G +  A  +FD M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------- 274
            R VV W  ++ AYA  G  +E   LF ++ R G+ PD  ++  VL   +  G       
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 275 -----KRHEEQVQAYAIKLL---------LYNNNS--------NVVLWNKKLSGYLQVGD 312
                + ++ Q   +    L         + + NS        +++ WN  + GY +   
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
            + A+  F +M+   ++ D  T    L A A   +L+ G+++HG  L++GF+S   V N+
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 373 LINMYSKMG 381
           L++MY K G
Sbjct: 240 LVDMYVKCG 248


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 188/550 (34%), Positives = 298/550 (54%), Gaps = 46/550 (8%)

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H   I+    AD+  S  L+++Y + G +  A  LF+      L +WN M+  +  + + 
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 129

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KAL LF  M   G    E T+++ V AC     + + KQ+H +A+K+  + ++ V + +
Sbjct: 130 EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTAL 189

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LD+Y KCG + DA  +F  +P   DV W++M++G V N   + AL ++H+ +  G+  ++
Sbjct: 190 LDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 249

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT +  + A +   AL +G+Q+ A   K    S+ FV  SL+DMYAKCG IE+AY +F  
Sbjct: 250 FTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSS 309

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ +N VLWNA+L G ++H    E +  FE M+  G+ P+ +T+I VLSACS+ GLV + 
Sbjct: 310 VEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKG 369

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F LM   + + P V HYS +VD LGRAG   EA + I  MPF+A+ASM  +LL +CR
Sbjct: 370 RKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCR 429

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPAD 833
           +  + E  +  A+ L  +EP ++  +VLLSNI+AA ++W++V  AR  +K    KK+   
Sbjct: 430 IYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGK 489

Query: 834 L-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                   I+ K+E L+  +K+ GY   T+  L DVEE  K+  
Sbjct: 490 SWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQEL 549

Query: 871 LYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHH 907
           L +HSEKLA  +G++  P  + I                     ++ +E +    NRFHH
Sbjct: 550 LRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHH 609

Query: 908 LRDGMCPCAD 917
            ++G C C +
Sbjct: 610 FKNGYCSCGE 619



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 55/386 (14%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQ---WFSI-------LRHAISTSD----LLLGKSTHAR 78
           SFSL +   L  S+  +   SS+   W  I       L+H + +S      + G + HA+
Sbjct: 13  SFSLQVRHLLAISNAMAERPSSKELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQ 72

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I+      D   +N LM MYS+CG +  AR+LFD+MP R L+SWN+++ ++  +G     
Sbjct: 73  IIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNG----- 127

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           +  +   LF  +++  T  S  T++ ++  C +   V+  + +HG+ALK  L  + FV  
Sbjct: 128 DCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 187

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++Y+K G +++A  +F+ M ER  V W  M+  Y +N   EE   LF      GL  
Sbjct: 188 ALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 247

Query: 259 DDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN------------------------ 293
           +  ++   L   +      E +QVQA + K  + +N                        
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA------ 343
                 NVVLWN  LSG+ +   +  A+  F  M +  +  + +T++  L+A +      
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 367

Query: 344 -GTDNLNLGQQIHGTTLKSGFYSAVI 368
            G    +L  ++H  +     YS ++
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMV 393



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 46/318 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++V WN  +  + Q GD   A+  F+ M +        T    + A A    +   +Q+H
Sbjct: 112 SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 171

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV--------C----------------------- 384
           G  LK+   S V VG +L+++Y+K G V        C                       
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 231

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       GL  +QFT++S L A ++    +   KQ+   + K    ++ FV ++L
Sbjct: 232 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIE-GKQVQAVSCKTGIGSNIFVISSL 290

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G + EA  +F + +  ++  WNA++ G+     S +A+  F  M   G   ++
Sbjct: 291 IDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 350

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           IT  + + AC  L ++++G++     ++      ++   S ++D+  + G + +A+   +
Sbjct: 351 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 410

Query: 552 DIPAPDDVA-WTTMISGC 568
            +P     + W ++++ C
Sbjct: 411 RMPFDATASMWGSLLASC 428


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 212/613 (34%), Positives = 316/613 (51%), Gaps = 88/613 (14%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           T  F L S  R SS  P       ++H H IK+   +D FV  ALI +Y   G++  A  
Sbjct: 113 TFPFLLNSCARLSSLEP-----GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLART 167

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LF+     DL ++N MI GY   N    AL LF  M  SG   DE T       C  L  
Sbjct: 168 LFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNE 227

Query: 508 LKQGKQMHAYAMKSGFELD--LCVSSGILDMYVKCG----------------------AM 543
              GKQ+HA   K+   +D  + + S I+DMY KCG                      +M
Sbjct: 228 PNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSM 287

Query: 544 V----------DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           V           A+ +FN +   D ++WT MISG    G+   AL ++ +M   G+ PDE
Sbjct: 288 VCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDE 347

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDC-SSDPFVGISLVDMYAKCGNIEDAYILFK 652
            T   ++ A + L A + G++++   I+    + +  +  +++DMYAKCG+I+ A  +F+
Sbjct: 348 VTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFR 407

Query: 653 QM--DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           ++  +M+   ++N+M+ GLAQHG GE  + +F ++ + G++PD VTF+GVL AC ++GL+
Sbjct: 408 RVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLI 467

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F  M   YGI+P++EHY  +VD LGR G  +EA +L+  MPFEA++ + RALL 
Sbjct: 468 EEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLS 527

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR  G+ + G+   +KL+ +E    + YVLLSNI A ANQW++    R  M+   ++K 
Sbjct: 528 ACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKP 587

Query: 831 PA----DLIFA---------------KVEGLIK----RIKEGGYVPDTDFVLLDVEEEEK 867
           P     +L  A               ++E ++K    R+K  GYVP+T  V+ D++EEEK
Sbjct: 588 PGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEK 647

Query: 868 ERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYAN--------R 904
           E  + YHSEKLA A+GL+   P+  I   K                 +Y          R
Sbjct: 648 ESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMR 707

Query: 905 FHHLRDGMCPCAD 917
           FHH R+G C C D
Sbjct: 708 FHHFRNGSCSCMD 720



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 42/351 (11%)

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS---MAEAEYLFENK 452
           +L +  S  +GL    QIH   I N      F  + LI  +   GS   +  +  LF   
Sbjct: 15  LLESCKSFKQGL----QIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQG 511
           D  +L  WN MI GY  S+N  +A+ L+  M   G    +  T    + +C  L  L+ G
Sbjct: 71  DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
            ++H++ +K GFE DL V + ++ +Y   G +  A+++F++    D V++ TMI G  + 
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 190

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPF 629
            + + AL ++ +M+ SG++PDEFTF  L    S L     G+QIHA + K      S+  
Sbjct: 191 NQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNIL 250

Query: 630 VGISLVDMYAKCG--------------------------------NIEDAYILFKQMDMR 657
           +  ++VDMYAKCG                                 I  A  LF  M  R
Sbjct: 251 LKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHER 310

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           + + W AM+ G +Q G   E L+LF++M+A G++PD VT + VLSAC+  G
Sbjct: 311 DVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLG 361



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 247/528 (46%), Gaps = 46/528 (8%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDKMPDRDLISWNSILAA 128
           G   HA+ + +      F  + L++ +S  GS   L ++R LF ++   +L  WN+++  
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 129 YAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           Y+ S     +N  E   L+ S+  + I   +  T   LL  C     +     VH + +K
Sbjct: 85  YSRS-----DNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIK 139

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   D FV  AL+++YS FG +  A+ LFD    RD+V +  M++ YAE    E    L
Sbjct: 140 HGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCL 199

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           F ++  SG+ PD+ +   +  V S L + +  +Q+ A   K  L + +SN++L +  +  
Sbjct: 200 FGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYK-NLRSIDSNILLKSAIVDM 258

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ----------IHG 356
           Y + G  + A   F  M  S     +  +   +   A    +N+ ++          I  
Sbjct: 259 YAKCGLINIAERVFSTMGTSK---SAAAWSSMVCGYARCGEINVARKLFNHMHERDVISW 315

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           T + SG+  A     +L  ++ +M  + G++ D+ TL +VL A + L     L K+++  
Sbjct: 316 TAMISGYSQAGQCSEAL-ELFKEMEAL-GIKPDEVTLVAVLSACARLG-AFDLGKRLYHQ 372

Query: 417 AIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFEN-----KDGFDLATWNAMIFGYILS 470
            I+N     ++ ++ A++D+Y + GS+  A  +F       K GF    +N+MI G    
Sbjct: 373 YIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGF---VFNSMIAGLAQH 429

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFEL 525
                A+ +F  + ++G + DE+T    + ACG   ++++GK++     +AY +K   E 
Sbjct: 430 GLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEH 489

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
             C    ++D+  + G + +A  +   +P   + V W  ++S C  +G
Sbjct: 490 YGC----MVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 154/398 (38%), Gaps = 84/398 (21%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L      S L  G   H+ I+      D F+ N L+ +YS  G+L  AR LFD+   RD
Sbjct: 117 LLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRD 176

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC--------- 169
           L+S+N+++  YA   +  +        LF  ++ S       T   L  +C         
Sbjct: 177 LVSYNTMIKGYAEVNQPES-----ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVG 231

Query: 170 -------------LSSGYVWASETVHGYALKIGLV------------------WDEFVSG 198
                        + S  +  S  V  YA K GL+                  W   V G
Sbjct: 232 KQIHAQVYKNLRSIDSNILLKSAIVDMYA-KCGLINIAERVFSTMGTSKSAAAWSSMVCG 290

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
                Y++ G+I  A+ LF+ M ERDV+ W  M+  Y++ G   E   LF ++   G+ P
Sbjct: 291 -----YARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKP 345

Query: 259 DDESVQCVLGVIS-----DLGKRHEEQV---------------------------QAYAI 286
           D+ ++  VL   +     DLGKR   Q                             A  I
Sbjct: 346 DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEI 405

Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
              +  N     ++N  ++G  Q G    AI  F  +I + ++ D VTF+  L A   + 
Sbjct: 406 FRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSG 465

Query: 347 NLNLGQQIHGTTLKS-GFYSAVIVGNSLINMYSKMGCV 383
            +  G+++  +   + G    +     ++++  + GC+
Sbjct: 466 LIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCL 503


>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 736

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 219/660 (33%), Positives = 335/660 (50%), Gaps = 36/660 (5%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGK--IREAKFLFDGMQE--RDVVLWKVMLRA 234
           E +HG+ALK G      VS +L+  Y    +  +  A  +F  +    RDV  W  +L  
Sbjct: 34  EALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNP 93

Query: 235 YAENGFGEEVFHLFVDLHRS--GLCPDDESVQCVLGVISDLGKRHEEQV-QAYAIKLLLY 291
            + +     + H F  +  S   + P   S        + +       V  A A KL   
Sbjct: 94  LSRHHPVSALSH-FRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSS 152

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
             ++NV +    L+ Y ++G    A   F  M+  N         V+ AA+         
Sbjct: 153 CGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNA--------VSWAAMV-------- 196

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
                    SG Y+          ++  M   C L  ++F   +VL A S +P GL +  
Sbjct: 197 ---------SG-YATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVS-VPLGLLMGT 245

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H   +K+  V    V  +L+ +Y +   M  A  +F +    +  TW+AMI GY  + 
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNG 305

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
            ++ A  +F  MH+SG    E T    + AC  +  L  GKQ H   +K GFE  + V S
Sbjct: 306 EANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKS 365

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            ++DMY KCG + DA+  F+ +   DDV  WT MI+G V NGE + AL +Y +M   G++
Sbjct: 366 ALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGII 425

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P   T   +++A +CL AL+ G+Q+HA ++K   S    VG +L  MY+KCGN+ED+ ++
Sbjct: 426 PSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVV 485

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F++M  R+ + WN+++   +QHG G + L +FE+MK  G  PD +TFI +LSACS+ GLV
Sbjct: 486 FRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLV 545

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +  F  M + Y + P ++HY+ +VD L RAG+ KEA + I S+  +    + R +LG
Sbjct: 546 DRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLG 605

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR   D + G +  E+LM L   DSSAY+LLSNI+AA  +W+DV   R  M+ + V KD
Sbjct: 606 ACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKD 665



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 56/421 (13%)

Query: 10  KPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQK------SHFSSSSSSSQWFSILRHA 63
           +P     YV+F+       R++ S++  L P  +       SHF S  SS +      H+
Sbjct: 64  RPLLGAAYVVFADIPA-ALRDVASWNSLLNPLSRHHPVSALSHFRSMMSSPEAVLPSPHS 122

Query: 64  ISTSDLLL--------GKSTHA---RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
            + +            G  THA   ++ +S    + F++  L+ MY + G++  A+R+FD
Sbjct: 123 FAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFD 182

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR--LTLAPLLKLCL 170
            M  R+ +SW ++++ YA       +   E F LFR + +         +T A L  + +
Sbjct: 183 GMLHRNAVSWAAMVSGYA-----TGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSV 237

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
             G +  ++ +HG  LK GLV    V  +LV +Y+K   +  A  +F   +ER+ + W  
Sbjct: 238 PLGLLMGTQ-LHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSA 296

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRH------- 277
           M+  YA+NG       +F+ +H SG  P + +   VL   SD+G      + H       
Sbjct: 297 MITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLG 356

Query: 278 -EEQVQAYAIKLLLYN----------------NNSNVVLWNKKLSGYLQVGDNHGAIECF 320
            E QV   +  + +Y                 +  +VVLW   ++G++Q G++  A+  +
Sbjct: 357 FETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLY 416

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M +  +    +T    L A A    L+LG+Q+H   LK  F     VG +L  MYSK 
Sbjct: 417 SRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKC 476

Query: 381 G 381
           G
Sbjct: 477 G 477



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 175/382 (45%), Gaps = 22/382 (5%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR--NGSM 442
            LR         LR ++S        + +H  A+K+   + + VS +LI  YC      +
Sbjct: 8   ALRMSHAQFIEHLRCAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLL 67

Query: 443 AEAEYLFENKDGF--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DEITIATA 498
             A  +F +      D+A+WN+++   +  ++   AL  F  M +S E +     + A A
Sbjct: 68  GAAYVVFADIPAALRDVASWNSLL-NPLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAA 126

Query: 499 VKACGCLLMLKQGKQMHAYAMK---SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
             A   +     G   HA A K   S    ++ VS+ +L+MY K GA+ DA+ +F+ +  
Sbjct: 127 FTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLH 186

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
            + V+W  M+SG       + A  ++  M +   +  +EF    ++ A S    L  G Q
Sbjct: 187 RNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQ 246

Query: 615 IHANLIKLDCSSDPFVGI-----SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           +H  ++K     D  VG      SLV MYAK   ++ A  +F     RN++ W+AM+ G 
Sbjct: 247 LHGLVLK-----DGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGY 301

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQ+G      ++F  M + G  P   TF+GVL+ACS  G +    +  H +  K G E +
Sbjct: 302 AQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQT-HCLMVKLGFETQ 360

Query: 730 VEHYSFLVDALGRAGRTKEAGE 751
           V   S LVD   + G   +A +
Sbjct: 361 VYVKSALVDMYAKCGCIGDAKD 382



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 35/305 (11%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           LL+G   H  +L    +    + N+L+TMY++   +  A R+F    +R+ I+W++++  
Sbjct: 241 LLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITG 300

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YA +GE N        R+F  +  S    +  T   +L  C   G +   +  H   +K+
Sbjct: 301 YAQNGEANC-----AARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKL 355

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHL 247
           G     +V  ALV++Y+K G I +AK  F  + +  DVVLW  M+  + +NG  EE   L
Sbjct: 356 GFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALML 415

Query: 248 FVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKL---------LLYNN 293
           +  + + G+ P   +V  VL   +     DLGK+   Q+      L          +Y+ 
Sbjct: 416 YSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSK 475

Query: 294 NSN---------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
             N               V+ WN  +S + Q G    A++ F  M       D +TF+  
Sbjct: 476 CGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINL 535

Query: 339 LAAVA 343
           L+A +
Sbjct: 536 LSACS 540



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 6/235 (2%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FLQ      + +   +  +L        L++GK TH  ++        ++ + L+ MY++
Sbjct: 314 FLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAK 373

Query: 101 CGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           CG +  A+  F ++ D  D++ W +++  +  +GE       E   L+  + +     S 
Sbjct: 374 CGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHE-----EALMLYSRMDKQGIIPSY 428

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           LT+  +L+ C     +   + +H   LK        V  AL  +YSK G + ++  +F  
Sbjct: 429 LTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRR 488

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           M +RDV+ W  ++  ++++G G +   +F ++   G  PD  +   +L   S +G
Sbjct: 489 MPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMG 543


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 219/753 (29%), Positives = 361/753 (47%), Gaps = 80/753 (10%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW-DEFVSGALVNIYSKFGKIREAKFL 216
           +R T   LLK C     +   +T+H   +  G  + D +++ +L+N Y K G    A  +
Sbjct: 48  TRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKV 107

Query: 217 FDGMQE-----RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           FD + E     +DV  W  ++  Y   G  +E    F  +   G+ PD  S+ C+L   S
Sbjct: 108 FDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSL-CILLGAS 166

Query: 272 DLGKRHEEQVQAYAIKLLLYNN-----------------------------NSNVVLWNK 302
           D    + +Q+  Y+++ + Y +                               NVV WN 
Sbjct: 167 DGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNV 226

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            + G+ + G    ++E ++     NV+  S +F   L+A    + ++ G Q+H   +K G
Sbjct: 227 MIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLG 286

Query: 363 FYSAVIVGNSLINMYSKMGCV--------------------------------CGLRT-- 388
           F +   V  SL+ MYSK   V                                 GL+   
Sbjct: 287 FENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYK 346

Query: 389 ---------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                    D  T  +VL +S  L       + IH   +K    ++  + +AL+ +Y + 
Sbjct: 347 QMKVLQIPPDSLTATNVL-SSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKC 405

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G+  +A  +F    G D+  W +MI G+  +    +ALE ++ M   GE+ D   +A+ V
Sbjct: 406 GNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVV 465

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
            AC  L  +  G  +H  A+KSG E D+ V+S ++DMY K      + ++F+D+P  + V
Sbjct: 466 SACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLV 525

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           AW ++IS    NG  DL++S++ QM   G+ PD  +   ++ + S +  L +G+ +H  L
Sbjct: 526 AWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYL 585

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+    SD  +  +L+DMY KCG ++ A  +F+ M   N V WN M+ G   HG+  + +
Sbjct: 586 IRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAM 645

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF++M++ G+ PD +TFI +L++C++ G + E  + F LM  ++GIEP +EHY  +VD 
Sbjct: 646 SLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDL 705

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAGR  +A   + ++P E   S+  +LL +CRV  + E GK  A KL+ +EP   S Y
Sbjct: 706 LGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNY 765

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           V L N++      D   + R  MK K +KK P 
Sbjct: 766 VQLLNLYGENELQDRAANLRASMKEKGLKKTPG 798



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 174/701 (24%), Positives = 318/701 (45%), Gaps = 91/701 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           S+L+     S+L  GK+ H+ I+       D ++T +L+  Y +CGS   A ++FDK+P+
Sbjct: 54  SLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPE 113

Query: 117 -----RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
                +D+  WNSI+  Y   G        EG   F  ++         +L  LL    S
Sbjct: 114 SEVSGQDVTFWNSIVNGYFRFGHKK-----EGIAQFCRMQLFGVRPDAYSLCILLG--AS 166

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKV 230
            G++  ++ +HGY+++     D F+   L+ +Y   G+  +A  LF  ++++ +VV W V
Sbjct: 167 DGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNV 226

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGL-------------CPDDESVQCVLGVISDLGKRH 277
           M+  + ENG  E    +++      +             C   E V   + V  DL K  
Sbjct: 227 MIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLG 286

Query: 278 EEQVQAYAIKLL-------LYNNNSNVV---------LWNKKLSGYLQVGDNHGAIECFV 321
            E        LL       L  +  NV          LWN  +S Y+  G ++  ++ + 
Sbjct: 287 FENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYK 346

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M    +  DS+T    L++     + + G+ IH   +K    S V + ++L+ MYSK G
Sbjct: 347 QMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCG 406

Query: 382 -------------------------------------------CVCGLRTDQFTLASVLR 398
                                                       V G + D   +ASV+ 
Sbjct: 407 NSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVS 466

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A + L + ++L   IH  AIK+    D FV+++L+D+Y +      +  +F +    +L 
Sbjct: 467 ACTGL-KNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLV 525

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            WN++I  Y  +     ++ LFS M   G   D ++I + + +   + +L++GK +H Y 
Sbjct: 526 AWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYL 585

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           ++     DL + + ++DMY+KCG +  AQ IF ++   + V W  MI+GC  +G+   A+
Sbjct: 586 IRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAM 645

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVD 636
           S++ +MR  G+ PD+ TF  L+ + +    +E+G ++   L+ ++   +P +   +++VD
Sbjct: 646 SLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLF-QLMTVEHGIEPRMEHYVNIVD 704

Query: 637 MYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +  + G ++DAY   K + +  +  +W ++L     H N E
Sbjct: 705 LLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVE 745



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 191/398 (47%), Gaps = 17/398 (4%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI-KNDTVADSFVSTALIDVYCRNGSMAE 444
           L   +FT  S+L+A   L   L   K IH   I K    +D +++T+LI+ Y + GS   
Sbjct: 45  LNATRFTYPSLLKACGFL-SNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGN 103

Query: 445 AEYLFEN-----KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           A  +F+        G D+  WN+++ GY    +  + +  F  M   G R D  ++   +
Sbjct: 104 AVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILL 163

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD- 558
            A      L   KQ+H Y+++  F  D  + SG++ MY  CG  +DA  +F ++    + 
Sbjct: 164 GASDG--HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNV 221

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           VAW  MI G  +NG  + +L +Y   +   V     +F   + A      +  G Q+H +
Sbjct: 222 VAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCD 281

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           L+KL   +DP+V  SL+ MY+KC  +EDA  +F Q+ ++ T LWNAM+     +G   + 
Sbjct: 282 LVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDG 341

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE---KYGIEPEVEHYSF 735
           LK+++ MK   + PDS+T   VLS+C   G    +Y+   L+     K  I+  V   S 
Sbjct: 342 LKIYKQMKVLQIPPDSLTATNVLSSCCLVG----SYDFGRLIHAELVKRPIQSNVALQSA 397

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
           L+    + G + +A  +  ++      +    + G C+
Sbjct: 398 LLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQ 435



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 12/243 (4%)

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGIL 534
           AL+ +S    +  R    T  + +KACG L  L+ GK +H+  +  GF   D  +++ ++
Sbjct: 36  ALQFYSRNPLNATRF---TYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLI 92

Query: 535 DMYVKCGAMVDAQSIFNDIP-----APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           + Y KCG+  +A  +F+ +P       D   W ++++G    G +   ++ + +M+L GV
Sbjct: 93  NFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGV 152

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            PD ++  IL+ AS     L   +QIH   ++     DPF+   L+ MY  CG   DA+ 
Sbjct: 153 RPDAYSLCILLGASD--GHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWR 210

Query: 650 LFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           LFK++ D  N V WN M+ G  ++G  E +L+++   K   V+  S +F   LSAC    
Sbjct: 211 LFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGE 270

Query: 709 LVS 711
            VS
Sbjct: 271 FVS 273



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 4/135 (2%)

Query: 29  RN-LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           RN LP  S+SL  F Q + +     S    S+L    S + L  GK+ H  ++      D
Sbjct: 536 RNGLPDLSISL--FSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSD 593

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG-NAENVTEGFRL 146
             L N L+ MY +CG L YA+ +F  M   +L++WN ++A     G+   A ++ +  R 
Sbjct: 594 LQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRS 653

Query: 147 FRSLRESITFTSRLT 161
           F    + ITF S LT
Sbjct: 654 FGIAPDDITFISLLT 668


>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
 gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
          Length = 1495

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 188/513 (36%), Positives = 298/513 (58%), Gaps = 30/513 (5%)

Query: 411 KQIHVHAIKND-TVADSFVSTALIDVYCRNGS---MAEAEYLFEN-KDGFDLATWNAMIF 465
           +QIH  +I++  +++D+ +   LI       S   M+ A  +F   +   ++  WN +I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 466 GYILSNNSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
           GY    NS  A  L+  M  SG    D  T    +KA   +  ++ G+ +H+  ++SGF 
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             + V + +L +Y  CG +  A  +F+ +P  D VAW ++I+G  +NG+ + AL++Y +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
              G+ PD FT   L+ A + + AL  G+++H  +IK+  + +      L+D+YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVEPDSVTFIGVLSA 703
           E+A  LF +M  +N+V W +++VGLA +G G+E ++LF+ M++  G+ P  +TF+G+L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ G+V E +E F  MRE+Y IEP +EH+  +VD L RAG+ K+A E I SMP + +  
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           + R LLGAC V GD++  ++   +++ LEP  S  YVLLSN++A+  +W DV   R +M 
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 824 RKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
           R  VKK P                       +D I+AK++ +  R++  GYVP    V +
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
           DVEEEEKE A+ YHSEK+A A+ LISTP  S I
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPI 546



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 177/332 (53%), Gaps = 12/332 (3%)

Query: 369 VGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
           +GNS+   ++Y +M     +  D  T   +++A +++ + + L + IH   I++   +  
Sbjct: 98  IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD-VRLGETIHSVVIRSGFGSLI 156

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V  +L+ +Y   G +A A  +F+     DL  WN++I G+  +    +AL L++ M++ 
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G + D  TI + + AC  +  L  GK++H Y +K G   +L  S+ +LD+Y +CG + +A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSC 605
           +++F+++   + V+WT++I G   NG    A+ ++  M  + G++P E TF  ++ A S 
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336

Query: 606 LTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
              +++G +    +    K++   + F    +VD+ A+ G ++ AY   K M M+ N V+
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFG--CMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           W  +L     HG+ +  L  F  ++   +EP+
Sbjct: 395 WRTLLGACTVHGDSD--LAEFARIQILQLEPN 424



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 114/204 (55%), Gaps = 7/204 (3%)

Query: 57  FSILRHAIST-SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           +  L  A++T +D+ LG++ H+ ++ S      ++ N+L+ +Y+ CG +  A ++FDKMP
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++DL++WNS++  +A +G+       E   L+  +          T+  LL  C   G +
Sbjct: 184 EKDLVAWNSVINGFAENGKPE-----EALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH Y +K+GL  +   S  L+++Y++ G++ EAK LFD M +++ V W  ++   
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298

Query: 236 AENGFGEEVFHLFVDLHRS-GLCP 258
           A NGFG+E   LF  +  + GL P
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLP 322



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           FSI RH +S SD  LGK     +++    P                 + YA ++F K+  
Sbjct: 39  FSI-RHGVSISDAELGKHLIFYLVSLPSPP----------------PMSYAHKVFSKIEK 81

Query: 117 R-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGY 174
             ++  WN+++  YA  G     N    F L+R +R S          P L+K   +   
Sbjct: 82  PINVFIWNTLIRGYAEIG-----NSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD 136

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V   ET+H   ++ G     +V  +L+++Y+  G +  A  +FD M E+D+V W  ++  
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLL 289
           +AENG  EE   L+ +++  G+ PD  ++  +L   +      LGKR    V  Y IK+ 
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR----VHVYMIKVG 252

Query: 290 LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           L  N  +SNV+     L  Y + G    A   F  M+  N    S T L+   AV G
Sbjct: 253 LTRNLHSSNVL-----LDLYARCGRVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNG 302



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 149/391 (38%), Gaps = 100/391 (25%)

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-PDDESVQCVLGVISDLGK-RHEEQV 281
           +V +W  ++R YAE G     F L+ ++  SGL  PD  +   ++  ++ +   R  E +
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 282 QAYAIKL----LLYNNNS------------------------NVVLWNKKLSGYLQVGDN 313
            +  I+     L+Y  NS                        ++V WN  ++G+ + G  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  +  M    ++ D  T +  L+A A    L LG+++H   +K G    +   N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TAL 432
           +++Y++    CG   +  TL                          ++ V  + VS T+L
Sbjct: 264 LDLYAR----CGRVEEAKTLF-------------------------DEMVDKNSVSWTSL 294

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I     NG   EA  LF+                Y+ S              T G    E
Sbjct: 295 IVGLAVNGFGKEAIELFK----------------YMES--------------TEGLLPCE 324

Query: 493 ITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           IT    + AC    M+K+G     +    Y ++   E   C    ++D+  + G +  A 
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC----MVDLLARAGQVKKAY 380

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                +P  P+ V W T++  C  +G+ DLA
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LGK  H  ++      +   +N L+ +Y+RCG +  A+ LFD+M D+
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT-FTSRLTLAPLLKLC-----LS 171
           + +SW S++   A +G G      E   LF+ +  +       +T   +L  C     + 
Sbjct: 287 NSVSWTSLIVGLAVNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 341

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKV 230
            G+ +       Y  KI    + F  G +V++ ++ G++++A      M  + +VV+W+ 
Sbjct: 342 EGFEYFRRMREEY--KIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397

Query: 231 MLRAYAENG 239
           +L A   +G
Sbjct: 398 LLGACTVHG 406


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 224/684 (32%), Positives = 349/684 (51%), Gaps = 62/684 (9%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           A ++   + G +  A+ L   M +R+ V W  ++ A A +    E   ++  + + GL P
Sbjct: 81  AAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAP 140

Query: 259 DDESVQCVL---GVIS--DLGKR-HEEQVQ-----------------------AYAIKLL 289
            + ++  VL   G ++  D G+R H   V+                       A A++L 
Sbjct: 141 TNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLF 200

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA----GT 345
            + ++ N V +   + G  Q G    A+  F  M RS ++ D V     L A A    G 
Sbjct: 201 DWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGD 260

Query: 346 DN----LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF-----TLASV 396
            N    + L Q IH   ++ GF S   VGNSLI+MY+K     G++ D+      +++SV
Sbjct: 261 YNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAK-----GMKMDEAMKVFESMSSV 315

Query: 397 LRASSSL-----------PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
              S ++              L +   +     + + V  S +  + I    +   +  A
Sbjct: 316 SIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCI----KARDVPSA 371

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+      + TWN ++ GY         +ELF  M     + D  T+A  +  C  L
Sbjct: 372 RAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRL 431

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
            +L+ GKQ+H+ ++K     D+ V+SG++DMY KCG +  AQ IFN +   D V W +MI
Sbjct: 432 GILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMI 491

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           SG   +   + A   + QMR +G+ P E ++A ++ + + L+++ QGRQIHA ++K    
Sbjct: 492 SGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYD 551

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            + +VG SL+DMYAKCGN++DA + F  M ++N V WN M+ G AQ+G GE+ ++LFE M
Sbjct: 552 QNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYM 611

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
                +PDSVTFI VL+ CS++GLV EA   F+ M   YGI P VEHY+ L+DALGRAGR
Sbjct: 612 LTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGR 671

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             E   +I  MP++  A +   LL AC V  + E G++ A+ L  L+P + S YVLLSNI
Sbjct: 672 FAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNI 731

Query: 806 FAAANQWDDVTSARGEMKRKNVKK 829
           +A   +  D ++ R  M  + V K
Sbjct: 732 YATLGRHGDASAVRALMSSRGVVK 755



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 297/658 (45%), Gaps = 60/658 (9%)

Query: 70  LLGKSTHA-RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L G   HA R   +   P+ +  N  ++   R G L  AR L  +MPDR+ +SWN+++AA
Sbjct: 57  LSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAA 116

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
            A S     ++  E   ++R + +     +  TLA +L  C +   +      HG A+K+
Sbjct: 117 VARS-----DSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKV 171

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GL  ++FV   L+ +Y+K G + +A  LFD M   + V +  M+   A++G  ++   LF
Sbjct: 172 GLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLF 231

Query: 249 VDLHRSGLCPDDESVQCVLGVISDL---------GKRHEEQVQAY--------------- 284
             + RS +  D  +V  VLG  +             R  + + A                
Sbjct: 232 ARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNS 291

Query: 285 -------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                        A+K+    ++ ++V WN  ++GY Q+G    A+E    M  S  + +
Sbjct: 292 LIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPN 351

Query: 332 SVTFLVALA----------AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            VT+   LA          A A  D ++        TL SG Y    +    I ++ +M 
Sbjct: 352 EVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSG-YGQEELHQDTIELFRRMQ 410

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
               ++ D+ TLA +L   S L   L L KQ+H  ++K     D FV++ LID+Y + G 
Sbjct: 411 HQ-NVQPDRTTLAVILSTCSRLGI-LELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQ 468

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +  A+ +F      D+  WN+MI G  + + + +A + F  M  +G    E + A+ + +
Sbjct: 469 VGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINS 528

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  + QG+Q+HA  +K G++ ++ V S ++DMY KCG M DA+  FN +   + VAW
Sbjct: 529 CARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAW 588

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             MI G   NG  + A+ ++  M  +   PD  TF I V      + L      + N ++
Sbjct: 589 NEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTF-IAVLTGCSHSGLVDEAIAYFNSME 647

Query: 622 LDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            +    P V     L+D   + G   +   +  +M  + + +LW  +L     H N E
Sbjct: 648 SNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAE 705



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/597 (23%), Positives = 265/597 (44%), Gaps = 74/597 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    + + L  G+  H   +      ++F+ N L+ MY++CGS+  A RLFD M   
Sbjct: 147 SVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSP 206

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS----- 172
           + +S+ +++   A SG      V +  RLF  +  S      + ++ +L  C  +     
Sbjct: 207 NEVSFTAMMGGLAQSGA-----VDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDY 261

Query: 173 ---GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
                +  ++++H   ++ G   D+ V  +L+++Y+K  K+ EA  +F+ M    +V W 
Sbjct: 262 NVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWN 321

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
           +++  Y + G  E    +   +  SG  P++ +   +L   S +  R     +A   K+ 
Sbjct: 322 ILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLA--SCIKARDVPSARAMFDKI- 378

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
              +  +V  WN  LSGY Q   +   IE F  M   NVQ D  T  V L+  +    L 
Sbjct: 379 ---SKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILE 435

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------CVC--------- 384
           LG+Q+H  ++K   ++ + V + LI+MYSK G                 VC         
Sbjct: 436 LGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLA 495

Query: 385 ------------------GLRTDQFTLASVLRAS---SSLPEGLHLSKQIHVHAIKNDTV 423
                             G+   + + AS++ +    SS+P+G    +QIH   +K+   
Sbjct: 496 IHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQG----RQIHAQVLKDGYD 551

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            + +V ++LID+Y + G+M +A   F      ++  WN MI GY  +    KA+ELF +M
Sbjct: 552 QNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYM 611

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCG 541
            T+ ++ D +T    +  C    ++ +    +  +M+S + +   V   + ++D   + G
Sbjct: 612 LTTKQKPDSVTFIAVLTGCSHSGLVDEAIA-YFNSMESNYGIRPLVEHYTCLIDALGRAG 670

Query: 542 AMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLA-LSIYHQMRLSGVVPDEFTF 596
              +  ++ + +P  DD + W  +++ CV +   +L   +  H  RL    P  +  
Sbjct: 671 RFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVL 727



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 198/438 (45%), Gaps = 44/438 (10%)

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            L +G  +   + N L+ +YS  G  C            LRA  +LP             
Sbjct: 36  VLAAGLAADTFLLNRLVELYSLSGLPC----------HALRAFRALPR------------ 73

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                  + +   A I   CR G +A A  L       +  +WN +I     S++  +AL
Sbjct: 74  ------PNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEAL 127

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           E++  M   G      T+A+ + ACG +  L  G++ H  A+K G + +  V +G+L MY
Sbjct: 128 EMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMY 187

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG++ DA  +F+ + +P++V++T M+ G   +G  D AL ++ +M  S +  D    +
Sbjct: 188 TKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVS 247

Query: 598 ILVKASS--------CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            ++ A +           A+   + IHA +++    SD  VG SL+DMYAK   +++A  
Sbjct: 248 SVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMK 307

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F+ M   + V WN ++ G  Q G  E  L++ + M+  G EP+ VT+  +L++C     
Sbjct: 308 VFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARD 367

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP---FEASASMHR 766
           V  A   F  +      +P V  ++ L+   G+    ++  EL   M     +   +   
Sbjct: 368 VPSARAMFDKIS-----KPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLA 422

Query: 767 ALLGACRVQGDTETGKWV 784
            +L  C   G  E GK V
Sbjct: 423 VILSTCSRLGILELGKQV 440



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 25/194 (12%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S++      S +  G+  HA++L      + ++ ++L+ MY++CG++  AR  F
Sbjct: 518 TESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFF 577

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE---SITFTSRLTLAPLLKL 168
           + M  +++++WN ++  YA +G G  E   E F    + ++   S+TF + LT       
Sbjct: 578 NCMIVKNIVAWNEMIHGYAQNGFG--EKAVELFEYMLTTKQKPDSVTFIAVLT------G 629

Query: 169 CLSSG-------YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           C  SG       Y  + E+ +G    I  + + +    L++   + G+  E   + D M 
Sbjct: 630 CSHSGLVDEAIAYFNSMESNYG----IRPLVEHYT--CLIDALGRAGRFAEVVAVIDKMP 683

Query: 222 ER-DVVLWKVMLRA 234
            + D +LW+V+L A
Sbjct: 684 YKDDAILWEVLLAA 697


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 187/566 (33%), Positives = 303/566 (53%), Gaps = 52/566 (9%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGFDL 457
           S +L EG    K++H   +K+   +D  ++  LI++Y + G +AEA  +F+   +   D+
Sbjct: 37  SKALLEG----KRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADV 92

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN +I  Y  +    +AL LF  M   G   +++T+  A+ AC  L   ++G+ +HA 
Sbjct: 93  ISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAI 152

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           A+    E D  V + +++M+ KC  +  A+++F+ +P  + V W  M++    N +   A
Sbjct: 153 AVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKA 212

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           + ++  M L GV PD  TF  ++ A + L A  +GR +H ++       D  +G +++  
Sbjct: 213 IQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHF 272

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y KCG +++A  +F  +  +NTV W+A+L   AQ+G   E ++L+ +M   G+E + +TF
Sbjct: 273 YGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITF 332

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +G+L ACS+ G   +  + F  M   +G+ P  EHY  L+D LGR+G+ + + +LI SMP
Sbjct: 333 LGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMP 392

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
           +E  +S   ALLGACR+ GD + G  +AE +  L+P DS  Y+LLSN++++  + D+   
Sbjct: 393 YEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARR 452

Query: 818 ARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPD 854
            R  M+ + + K P                          I A++E L  R+KE GYV D
Sbjct: 453 TRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVAD 512

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV--ILSNKEPLY----------- 901
              VL DVEEEEKE+ L+YHSE+LA A+GLISTPP +   I+ N    +           
Sbjct: 513 VRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISK 572

Query: 902 ----------ANRFHHLRDGMCPCAD 917
                     A RFHH  +G C C D
Sbjct: 573 VVGRKIVVRDAIRFHHFENGACSCGD 598



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 127/224 (56%), Gaps = 3/224 (1%)

Query: 485 TSGERLDEI-TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
           T  ER +EI T    +K C     L +GK++H+  +K G+  D  +++ +++MY KCG +
Sbjct: 16  TVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGI 75

Query: 544 VDAQSIFNDIPA--PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            +A+S+F+ I     D ++W  +I     NG    AL ++  M L GV+ ++ T    + 
Sbjct: 76  AEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAID 135

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A + L + E+GR +HA  +     SD  VG SLV+M+ KC N++ A  +F  +  +N V 
Sbjct: 136 ACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVT 195

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           WN M+   +Q+   ++ +++F  M   GV+PD+VTF+ ++ AC+
Sbjct: 196 WNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACA 239



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 142/314 (45%), Gaps = 36/314 (11%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S +  +L+    +  LL GK  H+ ++      DR + N L+ MY +CG +  AR +FD+
Sbjct: 25  STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 114 MPDR--DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           + ++  D+ISWN I+ AY  +G G      E   LF+++       +++TL   +  C S
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGK-----EALHLFKTMDLEGVIANQVTLINAIDACAS 139

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                    VH  A+   L  D  V  +LVN++ K   +  A+ +FD +  +++V W  M
Sbjct: 140 LPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNM 199

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAI 286
           +  Y++N   ++   +F  +   G+ PD  +   ++   + L     G+   + + A  I
Sbjct: 200 VAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGI 259

Query: 287 KL----------------------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
            +                       ++++    N V W+  L+ Y Q G    AIE +  
Sbjct: 260 PMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHE 319

Query: 323 MIRSNVQYDSVTFL 336
           M++  ++ + +TFL
Sbjct: 320 MVQGGLEVNGITFL 333



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 5/166 (3%)

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T+ +L+K  +   AL +G+++H+ L+K   +SD  +   L++MY KCG I +A  +F Q+
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 655 DMRN--TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
             +N   + WN ++    Q+G G+E L LF+ M   GV  + VT I  + AC+   L SE
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACA--SLPSE 143

Query: 713 AYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
                 H +     +E +    + LV+  G+      A  +  S+P
Sbjct: 144 EEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP 189



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 130/344 (37%), Gaps = 62/344 (18%)

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           +   N++V+ WN  +  Y Q G    A+  F  M    V  + VT + A+ A A   +  
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------- 383
            G+ +H   +     S  +VG SL+NM+ K   V                          
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 384 ----C-------------GLRTDQFTLASVLRASSSLP---EGLHLSKQIHVHAIKNDTV 423
               C             G++ D  T  +++ A ++L    EG  +   I    I  D  
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
               + TA++  Y + G +  A  +F++    +  TW+A++  Y  +    +A+EL+  M
Sbjct: 265 ----LGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEM 320

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS------GILDMY 537
              G  ++ IT    + AC        G+ M           D  V         ++D+ 
Sbjct: 321 VQGGLEVNGITFLGLLFACS-----HAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLL 375

Query: 538 VKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
            + G +  ++ + N +P  PD  AW  ++  C  +G+ D    I
Sbjct: 376 GRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARI 419


>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 184/503 (36%), Positives = 286/503 (56%), Gaps = 23/503 (4%)

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H   I+    AD+  S  L+++Y + G +  A  LF+      L +WN M+  +  + +S
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDS 129

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KAL LF  M   G    E T+++ V AC     + + KQ+H +A+K+  + ++ V + +
Sbjct: 130 EKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTAL 189

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LD+Y KCG + DA  +F  +P   DV W++M++G V N   + AL ++H+ +  G+  ++
Sbjct: 190 LDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 249

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT +  + A +   AL +G+Q+ A L K    S+ FV  SL+DMYAKCG IE+AYI+F  
Sbjct: 250 FTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSS 309

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ +N VLWNAML G ++H    E +  FE M+  G+ P+ +T+I VL+ACS+ GLV + 
Sbjct: 310 VEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKG 369

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F LM   + + P V HYS +VD LGRAG   EA +LI  MPF+A+ASM  +LL +CR
Sbjct: 370 RKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLASCR 429

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPAD 833
           +  + E  +  A+ L  +EP ++  +VLLSNI+AA N+W++V  AR  +K    KK+   
Sbjct: 430 IYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKKERGK 489

Query: 834 L-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                   I+ K+E L+  +K+ GY   T+  L DVEE  K+  
Sbjct: 490 SWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQEL 549

Query: 871 LYYHSEKLARAYGLISTPPSSVI 893
           L +HSEKLA  +G++  P  + I
Sbjct: 550 LRHHSEKLALTFGIMVLPHGAPI 572



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 174/386 (45%), Gaps = 55/386 (14%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQ---WFSI-------LRHAISTSD----LLLGKSTHAR 78
           SFSL +   L   +  +   SS+   W  I       L+H + +S      + G + HA+
Sbjct: 13  SFSLQVRHLLAIXNAXAERPSSKELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQ 72

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I+      D   +N LM MYS+CG +  AR+LFD+MP R L+SWN+++ ++  +G+    
Sbjct: 73  IIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSE-- 130

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
              +   LF  +++     S  T++ ++  C +   V+  + +HG+ALK  L  + FV  
Sbjct: 131 ---KALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 187

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++Y+K G +++A  +F+ M ER  V W  M+  Y +N   EE   LF      GL  
Sbjct: 188 ALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 247

Query: 259 DDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN------------------------ 293
           +  ++   L   +      E +QVQA   K  + +N                        
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVF 307

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA------ 343
                 NVVLWN  LSG+ +   +  A+  F  M +  +  + +T++  L A +      
Sbjct: 308 SSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVE 367

Query: 344 -GTDNLNLGQQIHGTTLKSGFYSAVI 368
            G    +L  ++H  +     YS ++
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMV 393



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 172/400 (43%), Gaps = 52/400 (13%)

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           + ++ G++   V   + +L++ A N    E       + R GL  D  +   ++ + S  
Sbjct: 36  ELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKC 95

Query: 274 GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
           G      +   A KL       ++V WN  +  + Q GD+  A+  F+ M +  +     
Sbjct: 96  G------LVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEF 149

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------C- 384
           T    + A A    +   +Q+HG  LK+   S V VG +L+++Y+K G V        C 
Sbjct: 150 TVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECM 209

Query: 385 ----------------------------------GLRTDQFTLASVLRASSSLPEGLHLS 410
                                             GL  +QFT++S L A ++    +   
Sbjct: 210 PERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIE-G 268

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQ+     K    ++ FV ++LID+Y + G + EA  +F + +  ++  WNAM+ G+   
Sbjct: 269 KQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRH 328

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCV 529
             S +A+  F  M   G   +EIT  + + AC  L ++++G++     ++      ++  
Sbjct: 329 VRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLH 388

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
            S ++D+  + G + +A+ + + +P     + W ++++ C
Sbjct: 389 YSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLASC 428


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 213/632 (33%), Positives = 312/632 (49%), Gaps = 118/632 (18%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGA--IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            N +VV WN  ++GY Q G +  +  +E F  M   N   ++ TF     A +   +   
Sbjct: 67  QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------------- 388
           G+  H   +K      V VG+SL+NMY K G     R                       
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186

Query: 389 ---------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                                ++F   SVL A + LPE ++  KQIH  A+KN  ++   
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALT-LPELVNNGKQIHCIAVKNGLLSIVS 245

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  AL+ +Y + GS+ +A   FE     +  TW+AMI G   S +S KAL+LFS MH SG
Sbjct: 246 VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSG 305

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R  E T    + AC  L    +GKQ+H Y +K GFE  + V + ++DMY KC ++VDA+
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
             F+ +  PD V WT+MI G V NGE + ALS+Y +M + G++P+E T A ++KA S L 
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           ALEQG+QIHA  +K     +  +G +L  MYAKCG ++D  ++F++M  R+ + WNAM+ 
Sbjct: 426 ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMIS 485

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           GL+Q+G G+E L+LFE+M+  G +PD VTF+ +LSACS+ GLV   +  F +M +++G++
Sbjct: 486 GLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMD 545

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P VEHY+ +VD L RAG+ KEA E      F  SA++   +                   
Sbjct: 546 PRVEHYACMVDILSRAGKLKEAIE------FTESATIDHGM------------------- 580

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
                                   W+DV   R  MK + V K+P                
Sbjct: 581 ------------------------WEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVV 616

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTD 856
                     I  ++  L K++K+ GY P TD
Sbjct: 617 KDQMHPQIGDIHVELRQLSKQMKDEGYEPATD 648



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 6/335 (1%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L   K +H   IK+ +    +++ +L+++Y +   + EA+++FE     D+ +WN +I G
Sbjct: 22  LQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80

Query: 467 YIL---SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           Y     S +SH  +ELF  M       +  T A    A   L+    G+  HA A+K   
Sbjct: 81  YSQHGPSGSSH-VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             D+ V S +++MY K G   +A+ +F+ +P  + V+W TMISG         AL ++  
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           MR      +EF F  ++ A +    +  G+QIH   +K    S   VG +LV MYAKCG+
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           ++DA   F+    +N++ W+AM+ G AQ G+ ++ LKLF  M   G+ P   TF+GV++A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           CS  G   E  +  H    K G E ++   + LVD
Sbjct: 320 CSDLGAAWEG-KQVHDYLLKLGFESQIYVMTALVD 353



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 234/536 (43%), Gaps = 85/536 (15%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S+  +F+ L        L  GK+ HA+I+ SS     ++ N+L+ +Y++C  L  A+ +F
Sbjct: 5   SNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVF 63

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           +++ ++D++SWN I+  Y+  G   + +V E   LF+ +R   T  +  T A +     +
Sbjct: 64  ERIQNKDVVSWNCIINGYSQHGPSGSSHVME---LFQRMRAENTAPNAHTFAGVFTAAST 120

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                     H  A+K+    D FV  +L+N+Y K G   EA+ +FD M ER+ V W  M
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI 286
           +  YA      E   LF  + R     ++     VL  ++     + GK    Q+   A+
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGK----QIHCIAV 236

Query: 287 K-------------LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           K             + +Y               +++ N + W+  ++G  Q GD+  A++
Sbjct: 237 KNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALK 296

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F +M  S ++    TF+  + A +       G+Q+H   LK GF S + V  +L++MY+
Sbjct: 297 LFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYA 356

Query: 379 KMGCVC-------------------------------------------GLRTDQFTLAS 395
           K   +                                            G+  ++ T+AS
Sbjct: 357 KCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMAS 416

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
           VL+A SSL   L   KQIH   +K     +  + +AL  +Y + G + +   +F      
Sbjct: 417 VLKACSSLA-ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR 475

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
           D+ +WNAMI G   +    +ALELF  M   G + D +T    + AC  + ++++G
Sbjct: 476 DVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 181/388 (46%), Gaps = 47/388 (12%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFL 90
           PS S  ++   Q+    +++ ++  F+ +  A ST  D   G+  HA  +      D F+
Sbjct: 86  PSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFV 145

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            ++LM MY + G    AR++FD MP+R+ +SW ++++ YA     + +   E   LFR +
Sbjct: 146 GSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA-----SQKLAAEALGLFRLM 200

Query: 151 RES------ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           R          FTS L+   L +L      V   + +H  A+K GL+    V  ALV +Y
Sbjct: 201 RREEEGENEFVFTSVLSALTLPEL------VNNGKQIHCIAVKNGLLSIVSVGNALVTMY 254

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G + +A   F+   +++ + W  M+   A++G  ++   LF  +H SG+ P + +  
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314

Query: 265 CVLGVISDLGKRHE-EQVQAYAIKLLL----------------------------YNNNS 295
            V+   SDLG   E +QV  Y +KL                              Y    
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++VLW   + GY+Q G+N  A+  +  M    +  + +T    L A +    L  G+QIH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             T+K GF   V +G++L  MY+K GC+
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCL 462


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/566 (35%), Positives = 306/566 (54%), Gaps = 55/566 (9%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S SL +GL    Q+H H +K        VS  LI++Y +      +  +F+        T
Sbjct: 38  SRSLRQGL----QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTT 93

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+++I  +  +     AL+ F  M   G R D+    +A KACG L     GK +H  A+
Sbjct: 94  WSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAV 153

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC--VDNGEEDLA 577
           K+G+  D+ V S ++DMY KCG + DA+ +F+++P  + V+W+ MI G   +D+G E  A
Sbjct: 154 KTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE--A 211

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L+++ Q  +  V  ++FTF+ +++  S  T LE G+ IH   +K+   S  FVG +L+ +
Sbjct: 212 LTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISL 271

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KCG IE AY +F ++  RN  LWN+ML+  AQH + +    LFE+M   G++P+ ++F
Sbjct: 272 YSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISF 331

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + VL ACS+ GLV +  E F LMR+ YGIEPE EHY+ LVD LGRAG+ +EA  +I  MP
Sbjct: 332 LSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMP 390

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
              + S+  ALL  CR+  DTE   +VA++++ ++   S  +VLLSN +AAA ++++   
Sbjct: 391 MRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAAR 450

Query: 818 ARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPD 854
            R  ++ + VKK+                           I+ K+E L + +++ GYV D
Sbjct: 451 MRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVAD 510

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA------------ 902
           T FVL  V+ EEK   + YHSE+LA A+GLI+ PP   I   K                 
Sbjct: 511 TSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSK 570

Query: 903 -----------NRFHHLRDGMCPCAD 917
                      NRFH   DG C C D
Sbjct: 571 CCGRVLIVRDNNRFHRFEDGKCSCGD 596



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 5/204 (2%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GKS H   + +    D F+ ++L+ MY++CG +  AR LFD+MP+R+++SW+ ++  YA
Sbjct: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYA 203

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
              +G      E   LF+         +  T + ++++C SS ++   + +HG  LK+  
Sbjct: 204 QLDDG-----VEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSF 258

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
               FV  AL+++YSK G I  A  +FD +  R++ LW  ML A A++   + VF LF +
Sbjct: 259 DSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEE 318

Query: 251 LHRSGLCPDDESVQCVLGVISDLG 274
           +   G+ P+  S   VL   S  G
Sbjct: 319 MGNVGMKPNFISFLSVLYACSHAG 342



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 45/344 (13%)

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           + Q+  +++++       +   W+  +S + Q      A++ F  M+   V+ D   +  
Sbjct: 72  KTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPS 131

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR---------- 387
           A  A       ++G+ +H   +K+G+Y  V VG+SL++MY+K G +   R          
Sbjct: 132 ATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERN 191

Query: 388 ---------------------------------TDQFTLASVLRASSSLPEGLHLSKQIH 414
                                             + FT +SV+R  SS    L L K IH
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS-STFLELGKLIH 250

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K    + SFV +ALI +Y + G +  A  +F+     +L  WN+M+       ++ 
Sbjct: 251 GLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQ 310

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +   LF  M   G + + I+  + + AC    ++++G++  +     G E +    + ++
Sbjct: 311 RVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLV 370

Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           D+  + G + +A S+   +P  P +  W  +++GC  + + ++A
Sbjct: 371 DLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 25/313 (7%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           +  L  G   HA IL         +++NL+ +YS+    +++ ++FD+ P +   +W+S+
Sbjct: 38  SRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSV 97

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE---TVH 182
           ++A+A +     E      + FR +                K C   G++  S+   +VH
Sbjct: 98  ISAFAQN-----EAPLLALQFFRRMLNDGVRPDDHIYPSATKAC---GFLRRSDVGKSVH 149

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
             A+K G   D FV  +LV++Y+K G+I +A+ LFD M ER+VV W  M+  YA+   G 
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNSNV 297
           E   LF       +  +D +   V+ V S     +LGK     +    +K+     +S+ 
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGK----LIHGLCLKMSF---DSSS 262

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL-NLGQQIHG 356
            + +  +S Y + G   GA + F  +   N+   + + L+A A  A T  +  L +++  
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWN-SMLIACAQHAHTQRVFGLFEEMGN 321

Query: 357 TTLKSGFYSAVIV 369
             +K  F S + V
Sbjct: 322 VGMKPNFISFLSV 334



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 6/176 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   S++ L LGK  H   L  S     F+ + L+++YS+CG +  A ++FD++P R
Sbjct: 232 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 291

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L  WNS+L A A        +    F LF  +       + ++   +L  C  +G V  
Sbjct: 292 NLGLWNSMLIACAQHA-----HTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEK 346

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV-VLWKVML 232
                      G+  +     +LV++  + GK++EA  +   M  R    +W  +L
Sbjct: 347 GREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 224/763 (29%), Positives = 363/763 (47%), Gaps = 84/763 (11%)

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +R L E  T   RL+L  LL+ C +   +   + VH + +   +  D +    ++ +Y+ 
Sbjct: 23  YRFLEE--TLPRRLSL--LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAM 78

Query: 207 FGKIREAKFLFDGMQER--DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            G       +F  +  R   +  W  ++ ++   G   +    +  +   G+ PD  +  
Sbjct: 79  CGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFP 138

Query: 265 CVL----------------GVISDLGKRHEEQVQAYAIKLLLYNNNSNV----------- 297
           C++                  +S LG    E V +  IK  L     +V           
Sbjct: 139 CLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQK 198

Query: 298 --VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
             V+WN  L+GY + G +   I+ F  M    +  ++VTF   L+  A    ++LG Q+H
Sbjct: 199 DCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 258

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG---------------------CVC---------- 384
           G  + SG      + NSL++MYSK G                     C+           
Sbjct: 259 GLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLME 318

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G+  D  T +S+L + S   E L   +QIH + +++    D F+++AL
Sbjct: 319 ESLIFFYEMISSGVLPDAITFSSLLPSVSKF-ENLEYCRQIHCYIMRHSISLDIFLTSAL 377

Query: 433 IDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ID Y  CR  SMA+   +F   +  D+  + AMI GY+ +  +  ALE+F  +       
Sbjct: 378 IDAYFKCRGVSMAQK--IFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISP 435

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           +EIT+ + +   G LL LK G+++H + +K GF+    +   ++DMY KCG M  A  IF
Sbjct: 436 NEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 495

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
             +   D V+W +MI+ C  +     A+ I+ QM +SG+  D  + +  + A + L +  
Sbjct: 496 GRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSES 555

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G+ IH  +IK   + D +   +L+DMYAKCGN++ A  +F  M  +N V WN+++    
Sbjct: 556 FGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYG 615

Query: 671 QHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
            HG  +++L LF +M +  G  PD +TF+ ++S C + G V E    F  M + YGI+P+
Sbjct: 616 NHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQ 675

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
            EHY+ +VD  GRAGR  EA E + SMPF   A +   LLGA R+  + E  K  + +LM
Sbjct: 676 QEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLM 735

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
            L+P++S  YVL+SN  A   +W+ VT  R  MK + V+K P 
Sbjct: 736 DLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPG 778


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 192/535 (35%), Positives = 286/535 (53%), Gaps = 48/535 (8%)

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ++I  YC NG + +   LF+     ++ +W +MI G      S +AL LF  M   G  +
Sbjct: 140 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 199

Query: 491 DEI--TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
                T    + AC     L QG Q+HA+  K G+  D  +S+ ++  Y  C  M D+  
Sbjct: 200 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLR 259

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+     + V WT +++G   N + + AL ++ +M   GV+P++ +F   + +   L A
Sbjct: 260 VFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA 319

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L+ GR+IH   +KL   +D FVG SL+ MY +CGN+ D  ++FK++  +N V WN+++VG
Sbjct: 320 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVG 379

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQHG G   L  F  M    VEPD +TF G+LSACS++G+  +    F    E    E 
Sbjct: 380 CAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEV 439

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +++HY+ +VD LGR+G+ +EA ELI +MP +A++ +   LL AC +    E  +  A+ +
Sbjct: 440 KLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCI 499

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------- 831
           + LEP  SSAYVLLSN++A+A++W DV+  R EMK++ + K P                 
Sbjct: 500 IDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSG 559

Query: 832 ------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                 +D I+ K+E L  ++KE GYVPD  F L DVE+E+KE  L YHSE+LA  +GLI
Sbjct: 560 DRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLI 619

Query: 886 STPPSSVILSNKE-----------PLYA------------NRFHHLRDGMCPCAD 917
           ST   S I   K             L A             RFHH  DG C C D
Sbjct: 620 STVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGD 674



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 220/498 (44%), Gaps = 36/498 (7%)

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           +I EA+ +FD +   DV L+ +M+  YA N   +    LF ++    +   +  ++    
Sbjct: 26  RIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFD 85

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSN 327
             +DL           A KL       +VV W   ++G+LQ G    A   F  M  R  
Sbjct: 86  C-ADL---------TMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI 135

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ------IHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             ++S+ +          D L L Q+      I  T++  G         +L      MG
Sbjct: 136 AAWNSMIYGYCCNGRV-EDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMG 194

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           C   ++    T   V+ A ++    L+   QIH H  K     D+++S ALI  Y     
Sbjct: 195 CGVEVKPTSSTYCCVITACAN-ASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 253

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M ++  +F  K   ++  W A++ GY L+     AL++F  M   G   ++ +  +A+ +
Sbjct: 254 MEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNS 313

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  L  G+++H  A+K G E D+ V + ++ MY +CG + D   IF  I   + V+W
Sbjct: 314 CCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSW 373

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL-- 619
            ++I GC  +G    AL+ ++QM  S V PDE TF  L+ A S     ++GR +      
Sbjct: 374 NSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 433

Query: 620 -----IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHG 673
                +KLD  +       +VD+  + G +E+A  L + M ++ N+++W  +L     H 
Sbjct: 434 NKSAEVKLDHYA------CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHS 487

Query: 674 N---GEETLKLFEDMKAH 688
                E   K   D++ H
Sbjct: 488 KLEVAERAAKCIIDLEPH 505



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 155/341 (45%), Gaps = 36/341 (10%)

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           N T   +F   ++I  + RN  + EA  +F+     D+  +  MI GY  +     AL+L
Sbjct: 5   NYTKFCTFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQL 64

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM----------HAYAMKSGF------ 523
           F  M       D ++  + +K C     L   +++              M +GF      
Sbjct: 65  FYEMPVK----DVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKI 120

Query: 524 EL-----------DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           E+           D+   + ++  Y   G + D   +F ++P  + ++WT+MI G   +G
Sbjct: 121 EVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHG 180

Query: 573 EEDLALSIYHQMRLSG--VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
             + AL ++ QM   G  V P   T+  ++ A +  +AL QG QIHA++ KL  S D ++
Sbjct: 181 RSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYI 240

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +L+  YA C  +ED+  +F      N V+W A++ G   +   E+ LK+F +M   GV
Sbjct: 241 SAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGV 300

Query: 691 EPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEV 730
            P+  +F   L++C   GL +  +    H    K G+E +V
Sbjct: 301 LPNQSSFTSALNSC--CGLEALDWGREIHTAAVKLGLETDV 339



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/533 (21%), Positives = 219/533 (41%), Gaps = 107/533 (20%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + +    PD +L   ++T Y+R     +A +LF +MP +D++SWNS++      G  +  
Sbjct: 33  VFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMI-----KGCFDCA 87

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV-HGYALKIGLVWDEFVS 197
           ++T   +LF  + E     S ++   ++   L  G +  +E + +    +    W+  + 
Sbjct: 88  DLTMARKLFDEMPER----SVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIY 143

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-- 255
           G   N     G++ +   LF  M  R+V+ W  M+    ++G  EE   LF  +   G  
Sbjct: 144 GYCCN-----GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198

Query: 256 LCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKL-------------LLYNN-------- 293
           + P   +  CV+   ++    ++  Q+ A+  KL               Y N        
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                  + NVV+W   ++GY     +  A++ F  M+R  V  +  +F  AL +  G +
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
            L+ G++IH   +K G  + V VGNSLI MY + G                    +L +G
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCG--------------------NLNDG 358

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           + + K+I   + KN                                    + +WN++I G
Sbjct: 359 VVIFKRI---SKKN------------------------------------IVSWNSVIVG 379

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY-AMKSGFEL 525
                    AL  F+ M  S    DEIT    + AC    M ++G+ +  Y +     E+
Sbjct: 380 CAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEV 439

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLA 577
            L   + ++D+  + G + +A+ +  ++P   + + W  ++S C  + + ++A
Sbjct: 440 KLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVA 492



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 141/354 (39%), Gaps = 79/354 (22%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W S+++     +DL + +     +   S +    + N  +      G +  A  LF KMP
Sbjct: 76  WNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQF----GKIEVAEGLFYKMP 131

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRL------------- 160
            RD+ +WNS++  Y  +G      V +G RLF+ +  R  I++TS +             
Sbjct: 132 FRDIAAWNSMIYGYCCNGR-----VEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEAL 186

Query: 161 ------------------TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
                             T   ++  C ++  ++    +H +  K+G  +D ++S AL+ 
Sbjct: 187 GLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALIT 246

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            Y+   ++ ++  +F G    +VV+W  ++  Y  N   E+   +F ++ R G+ P+  S
Sbjct: 247 FYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSS 306

Query: 263 VQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN------------------------ 293
               L         D G+    ++   A+KL L  +                        
Sbjct: 307 FTSALNSCCGLEALDWGR----EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIF 362

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                 N+V WN  + G  Q G    A+  F  M+RS V+ D +TF   L+A +
Sbjct: 363 KRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS 416



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 19/307 (6%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +SS +  ++    + S L  G   HA +       D +++  L+T Y+ C  +  + R+F
Sbjct: 202 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 261

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCL 170
                 +++ W +++  Y  + +       +  ++F   +RE +        + L   C 
Sbjct: 262 HGKLHMNVVIWTALVTGYGLNCKHE-----DALKVFGEMMREGVLPNQSSFTSALNSCCG 316

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                W  E +H  A+K+GL  D FV  +L+ +Y + G + +   +F  + ++++V W  
Sbjct: 317 LEALDWGRE-IHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNS 375

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL 290
           ++   A++G G      F  + RS + PD+ +   +L   S  G   + +      K   
Sbjct: 376 VIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRC---LFKYFS 432

Query: 291 YNNNSNVVLWNKKLSGYLQVGD---NHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTD 346
            N ++ V     KL  Y  + D     G +E    +IR+  V+ +S+ +LV L+A     
Sbjct: 433 ENKSAEV-----KLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHS 487

Query: 347 NLNLGQQ 353
            L + ++
Sbjct: 488 KLEVAER 494


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 199/584 (34%), Positives = 308/584 (52%), Gaps = 54/584 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD-SFVSTALIDVYCRNGSMA 443
           GLR + FT  S  +A++S P       Q+H  A++   + D +FVS A +D+Y + G +A
Sbjct: 114 GLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLA 173

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A  LF+     ++  WNA++   +L     + +E +  +  +G   + +++     AC 
Sbjct: 174 LARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACA 233

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            +  L  G+Q + +  K GF  D+ VS+ ++D Y KC  +  A+++F+ +   ++V+W +
Sbjct: 234 GMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCS 293

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           M+     NG E+ A  +Y   R +G  P +F  + ++   + L  L+ GR +HA  ++  
Sbjct: 294 MVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSC 353

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             S+ FV  +LVDMY KCG IEDA  +F +M  RN V WNAM+ G A  G+    L +F+
Sbjct: 354 IDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFD 413

Query: 684 DM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
            M       P+ +T + VL+ACS  GL  E YE F  M+ ++GIEP +EHY+ +VD L R
Sbjct: 414 KMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCR 473

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  + A ++I  MP   S S+  ALLG C++ G TE G+  AEKL  L+P DS  +VLL
Sbjct: 474 AGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLL 533

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------------DLIF 836
           SN+ A+A +W + T  R EMK   +KKDP                             + 
Sbjct: 534 SNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALL 593

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--- 893
           AK++G   +++  GY+PDT + L D+EEEEKE  ++ HSEKLA A+GLI  PP   I   
Sbjct: 594 AKLKG---QMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIM 650

Query: 894 ------------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                             ++ +E +    N FHH ++  C C D
Sbjct: 651 KNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKD 694



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 126/283 (44%), Gaps = 35/283 (12%)

Query: 72  GKSTHARILNSSQIPD-RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G   HA  L    +PD  F++   + MY + G L  ARRLFD+MP+R++++WN+++    
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G        E    +  LR +    + +++      C     +   E  +G+  K G 
Sbjct: 199 LDGR-----PLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGF 253

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  VS ++V+ Y K   + +A+ +FDGM  R+ V W  M+ AYA+NG  EE F +++ 
Sbjct: 254 GKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLG 313

Query: 251 LHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNN---------------- 293
             R+G  P D  V  VL   +  LG      + A A++  + +N                
Sbjct: 314 ARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGG 373

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                         N+V WN  + GY  +GD H A+  F  MI
Sbjct: 374 IEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMI 416



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 158/371 (42%), Gaps = 52/371 (14%)

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           R G  PDD  V C     + L    +    A A +L     N NVV WN  ++  +  G 
Sbjct: 148 RFGYLPDDAFVSC-----AALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGR 202

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
               +E +  +  +    + V+      A AG  NL+LG+Q +G   K GF   V V NS
Sbjct: 203 PLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNS 262

Query: 373 LINMYSKMGCV---------CGLRTD---------------------------------- 389
           +++ Y K  CV          G+R +                                  
Sbjct: 263 VVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPT 322

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
            F ++SVL   + L  GL L + +H  A+++   ++ FV++AL+D+Y + G + +AE +F
Sbjct: 323 DFMVSSVLTTCAGL-LGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVF 381

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLML 508
                 +L TWNAMI GY    ++H AL +F  M    E   + IT+   + AC    + 
Sbjct: 382 FEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLT 441

Query: 509 KQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMIS 566
           K+G ++      + G E  +   + ++D+  + G    A  I   +P  P    W  ++ 
Sbjct: 442 KEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLG 501

Query: 567 GCVDNGEEDLA 577
           GC  +G+ +L 
Sbjct: 502 GCKMHGKTELG 512



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 8/257 (3%)

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMK---SGFELDLCVSSGILDMYVKCGAMVDAQ 547
           D   +A AV+A       + G+  HA A++         LC    ++++Y K      A 
Sbjct: 16  DAQLLAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAH--LVNLYSKLDLPGAAA 73

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK-ASSCL 606
           +     P+P  V++T  ISG   +     ALS +  M   G+ P++FTF    K A+S  
Sbjct: 74  ASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAP 133

Query: 607 TALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
                G Q+HA  ++      D FV  + +DMY K G +  A  LF +M  RN V WNA+
Sbjct: 134 PRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAV 193

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           +      G   ET++ +  ++  G  P+ V+     +AC+    +S   E F+    K G
Sbjct: 194 MTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLG-EQFYGFVAKCG 252

Query: 726 IEPEVEHYSFLVDALGR 742
              +V   + +VD  G+
Sbjct: 253 FGKDVSVSNSVVDFYGK 269



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 5/182 (2%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           ++L LG+  +  +       D  ++N+++  Y +C  +  AR +FD M  R+ +SW S++
Sbjct: 236 TNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMV 295

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            AYA +G   AE   E F ++   R +    +   ++ +L  C     +     +H  A+
Sbjct: 296 VAYAQNG---AEE--EAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAV 350

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           +  +  + FV+ ALV++Y K G I +A+ +F  M +R++V W  M+  YA  G       
Sbjct: 351 RSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALS 410

Query: 247 LF 248
           +F
Sbjct: 411 VF 412



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 18/183 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LG++ HA  + S    + F+ + L+ MY +CG +  A ++F +MP R
Sbjct: 328 SVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQR 387

Query: 118 DLISWNSILAAYAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +L++WN+++  YAH G+  NA +V +     + +    T  + +TL  +L  C   G   
Sbjct: 388 NLVTWNAMIGGYAHIGDAHNALSVFD-----KMIMGQETAPNYITLVNVLTACSRGGL-- 440

Query: 177 ASETVHGYALKIGLVWDEFVS------GALVNIYSKFGKIREAKFLFDGMQER-DVVLWK 229
              T  GY L   + W   +         +V++  + G    A  +  GM  R  + +W 
Sbjct: 441 ---TKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWG 497

Query: 230 VML 232
            +L
Sbjct: 498 ALL 500


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 188/550 (34%), Positives = 298/550 (54%), Gaps = 46/550 (8%)

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H   I+    AD+  S  L+++Y + G +  A  LF+      L +WN M+  +  + + 
Sbjct: 43  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 102

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KAL LF  M   G    E T+++ V AC     + + KQ+H +A+K+  + ++ V + +
Sbjct: 103 EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTAL 162

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LD+Y KCG + DA  +F  +P   DV W++M++G V N   + AL ++H+ +  G+  ++
Sbjct: 163 LDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 222

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           FT +  + A +   AL +G+Q+ A   K    S+ FV  SL+DMYAKCG IE+AY +F  
Sbjct: 223 FTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSS 282

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           ++ +N VLWNA+L G ++H    E +  FE M+  G+ P+ +T+I VLSACS+ GLV + 
Sbjct: 283 VEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKG 342

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F LM   + + P V HYS +VD LGRAG   EA + I  MPF+A+ASM  +LL +CR
Sbjct: 343 RKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCR 402

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPAD 833
           +  + E  +  A+ L  +EP ++  +VLLSNI+AA ++W++V  AR  +K    KK+   
Sbjct: 403 IYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGK 462

Query: 834 L-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                   I+ K+E L+  +K+ GY   T+  L DVEE  K+  
Sbjct: 463 SWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQEL 522

Query: 871 LYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHH 907
           L +HSEKLA  +G++  P  + I                     ++ +E +    NRFHH
Sbjct: 523 LRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHH 582

Query: 908 LRDGMCPCAD 917
            ++G C C +
Sbjct: 583 FKNGYCSCGE 592



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 41/333 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G + HA+I+      D   +N LM MYS+CG +  AR+LFD+MP R L+SWN+++ ++  
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G     +  +   LF  +++  T  S  T++ ++  C +   V+  + +HG+ALK  L 
Sbjct: 99  NG-----DCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALD 153

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            + FV  AL+++Y+K G +++A  +F+ M ER  V W  M+  Y +N   EE   LF   
Sbjct: 154 SNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRA 213

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN----------------- 293
              GL  +  ++   L   +      E +QVQA + K  + +N                 
Sbjct: 214 QAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGII 273

Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        NVVLWN  LSG+ +   +  A+  F  M +  +  + +T++  L+A 
Sbjct: 274 EEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSAC 333

Query: 343 A-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
           +       G    +L  ++H  +     YS ++
Sbjct: 334 SHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMV 366



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 6/262 (2%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L+ F+Q     +S S     S++    +   +   K  H   L ++   + F+   L+ 
Sbjct: 105 ALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLD 164

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           +Y++CG +  A  +F+ MP+R  ++W+S++A Y  +     E   E   LF   +     
Sbjct: 165 VYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN-----ELYEEALVLFHRAQAMGLE 219

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            ++ T++  L  C +   +   + V   + K G+  + FV  +L+++Y+K G I EA  +
Sbjct: 220 HNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTV 279

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
           F  ++E++VVLW  +L  ++ +    E    F  + + G+CP+D +   VL   S LG  
Sbjct: 280 FSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLV 339

Query: 277 HEEQVQAYAIKLLLYNNNSNVV 298
            E+  + + + + ++N + NV+
Sbjct: 340 -EKGRKYFDLMIRVHNVSPNVL 360



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 46/318 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           ++V WN  +  + Q GD   A+  F+ M +        T    + A A    +   +Q+H
Sbjct: 85  SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 144

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV--------C----------------------- 384
           G  LK+   S V VG +L+++Y+K G V        C                       
Sbjct: 145 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 204

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       GL  +QFT++S L A ++    +   KQ+   + K    ++ FV ++L
Sbjct: 205 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIE-GKQVQAVSCKTGIGSNIFVISSL 263

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G + EA  +F + +  ++  WNA++ G+     S +A+  F  M   G   ++
Sbjct: 264 IDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 323

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           IT  + + AC  L ++++G++     ++      ++   S ++D+  + G + +A+   +
Sbjct: 324 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 383

Query: 552 DIPAPDDVA-WTTMISGC 568
            +P     + W ++++ C
Sbjct: 384 RMPFDATASMWGSLLASC 401


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/578 (33%), Positives = 307/578 (53%), Gaps = 52/578 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D  T + +++   S    +H    I  H   N      F+   LI++Y +   + +
Sbjct: 8   GLWADSATYSELIKCCLS-HRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLND 66

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ +W  MI  Y       KALEL   M   G R +  T ++ ++AC  
Sbjct: 67  AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN- 125

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
              +   + +H   +K G E D+ V S ++D++ K G   DA S+F+++   D + W ++
Sbjct: 126 --GMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 183

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   N   D+AL ++ +M+ +G + ++ T   +++A + L  LE G Q H +++K D 
Sbjct: 184 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 242

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             D  +  +LVDMY KCG++EDA  +F QM  R+ + W+ M+ GLAQ+G  +E LKLFE 
Sbjct: 243 -QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           MK+ G +P+ +T +GVL ACS+ GL+ + +  F  M++ YGI P  EHY  ++D LG+AG
Sbjct: 302 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAG 361

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           +  +A +L+  M  E  A   R LLGACRVQ +    ++ A+K++AL+P D+  Y +LSN
Sbjct: 362 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSN 421

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFA----------------KVEG 841
           I+A + +WD V   R  M+   +KK+P          I A                K+  
Sbjct: 422 IYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQ 481

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------- 893
           LI R+   GYVP+T+FVL D+E E+ E +L +HSEKLA A+GL++ P   VI        
Sbjct: 482 LIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRI 541

Query: 894 -------------LSNKEPLYAN--RFHHLRDGMCPCA 916
                        L N+  +  +  R+HH +DG C C 
Sbjct: 542 CGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 171/380 (45%), Gaps = 48/380 (12%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           + + G   D  T +  +K C     + +G  +  +   +G +  + + + +++MYVK   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + DA  +F+ +P  + ++WTTMIS          AL +   M   GV P+ +T++ +++A
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + ++ +   R +H  +IK    SD +V  +L+D++AK G  EDA  +F +M   + ++W
Sbjct: 124 CNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS----------------- 705
           N+++ G AQ+   +  L+LF+ MK  G   +  T   VL AC+                 
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240

Query: 706 ----------------YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
                             G + +A   F+ M+E+     +V  +S ++  L + G ++EA
Sbjct: 241 YDQDLILNNALVDMYCKCGSLEDARRVFNQMKER-----DVITWSTMISGLAQNGYSQEA 295

Query: 750 GELILSMPFEASASMHRALLG---ACRVQGDTETGKWV---AEKLMALEPFDSSAYVLLS 803
            +L   M    +   +  ++G   AC   G  E G +     +KL  + P     Y  + 
Sbjct: 296 LKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINP-GREHYGCMI 354

Query: 804 NIFAAANQWDDVTSARGEMK 823
           ++   A + DD      EM+
Sbjct: 355 DLLGKAGKLDDAVKLLNEME 374



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 193/485 (39%), Gaps = 102/485 (21%)

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
           SL+    +    T + L+K CLS   V     +  +    G     F+   L+N+Y KF 
Sbjct: 3   SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFN 62

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL- 267
            + +A  LFD M +R+V+ W  M+ AY++    ++   L V + R G+ P+  +   VL 
Sbjct: 63  LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122

Query: 268 -------------GVISDLGKRHEEQVQAYAIKLL-----------LYNN--NSNVVLWN 301
                        G+I + G   +  V++  I +            +++     + ++WN
Sbjct: 123 ACNGMSDVRMLHCGIIKE-GLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWN 181

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             + G+ Q   +  A+E F  M R+    +  T    L A  G   L LG Q H   +K 
Sbjct: 182 SIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK- 240

Query: 362 GFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
            +   +I+ N+L++MY    C CG      +L    R  + + E                
Sbjct: 241 -YDQDLILNNALVDMY----CKCG------SLEDARRVFNQMKE---------------- 273

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D    + +I    +NG                                S +AL+LF 
Sbjct: 274 --RDVITWSTMISGLAQNGY-------------------------------SQEALKLFE 300

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-YAMKSGFELDLCVSSGILDM 536
            M +SG + + ITI   + AC    +L+ G    + M   Y +  G E   C    ++D+
Sbjct: 301 LMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGC----MIDL 356

Query: 537 YVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEF 594
             K G + DA  + N++   PD V W T++  C    + ++ L+ Y   ++  + P D  
Sbjct: 357 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC--RVQRNMVLAEYAAKKVIALDPEDAG 414

Query: 595 TFAIL 599
           T+ +L
Sbjct: 415 TYTVL 419



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 10/217 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR     SD+   +  H  I+      D ++ + L+ ++++ G    A  +FD+M   
Sbjct: 119 SVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTG 175

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D I WNSI+  +A +   +         LF+ ++ +     + TL  +L+ C     +  
Sbjct: 176 DAIVWNSIIGGFAQNSRSDV-----ALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 230

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
               H + +K     D  ++ ALV++Y K G + +A+ +F+ M+ERDV+ W  M+   A+
Sbjct: 231 GMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQ 288

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           NG+ +E   LF  +  SG  P+  ++  VL   S  G
Sbjct: 289 NGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAG 325



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 46/306 (15%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P  FL N L+ MY +   L  A +LFD+MP R++ISW ++++AY+       +   +   
Sbjct: 46  PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS-----KCKIHQKALE 100

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           L   +       +  T + +L+ C     V     +H   +K GL  D +V  AL+++++
Sbjct: 101 LLVLMLRDGVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFA 157

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G+  +A  +FD M   D ++W  ++  +A+N   +    LF  + R+G   +  ++  
Sbjct: 158 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 217

Query: 266 VLGVIS-----DLGKRHEEQVQAYAIKLLLYN----------------------NNSNVV 298
           VL   +     +LG +    +  Y   L+L N                         +V+
Sbjct: 218 VLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVI 277

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W+  +SG  Q G +  A++ F  M  S  + + +T +  L A +           H   
Sbjct: 278 TWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACS-----------HAGL 326

Query: 359 LKSGFY 364
           L+ G+Y
Sbjct: 327 LEDGWY 332


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 240/800 (30%), Positives = 372/800 (46%), Gaps = 136/800 (17%)

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
           HL   +H + L  D+E       +IS   K     +  +A++L L   + NVV +   +S
Sbjct: 81  HLAKTVHATLLKRDEEDTHLSNALISTYLKL---NLFPHALRLFLSLPSPNVVSYTTLIS 137

Query: 306 GYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGT-DNLNLGQQIHGTTLKSGF 363
            +L     H A+  F+ M  RS++  +  T++  L A +    + + G Q+H   LK+  
Sbjct: 138 -FLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAH 196

Query: 364 YSAVIVGNSLINMYSK-------------------------------------------- 379
           + +  V N+L+++Y+K                                            
Sbjct: 197 FDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRN 256

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           M      R D FTL+ +L AS+SL EG    +Q+H HA+K     D  V   LI  Y + 
Sbjct: 257 MQATDAFRVDDFTLSILLTASASLMEG----QQVHAHAVKLGLETDLNVGNGLIGFYSKF 312

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYI--------------------LSNNS------ 473
           G++ + E+LFE     D+ TW  M+  Y+                    +S N+      
Sbjct: 313 GNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFC 372

Query: 474 -----HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
                 +A+ LF  M   G  L + ++ + V ACG L   K  KQ+H +A+K GF  +  
Sbjct: 373 RNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGY 432

Query: 529 VSSGILDMYVKCGAMVDAQSIF--NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           V + +LDMY +CG MVDA  +F   ++     V WT MI G   NG+ + A+ ++H  R 
Sbjct: 433 VEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRS 492

Query: 587 SG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
            G V+ DE   A ++     +  L+ G+QIH ++IK     +  VG ++V MY KCG+++
Sbjct: 493 DGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVD 552

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           DA  +F  M   + V WN ++ G   H  G+  L+++ +M   G++P+ VTF+ ++SA  
Sbjct: 553 DAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYR 612

Query: 706 YTGL--VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
            T L  V +    F+ MR  Y IEP   HY+  +  LG  G  +EA E I +MPF+ SA 
Sbjct: 613 QTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSAL 672

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           + R LL  CR+  +   GKW A+ ++ALEP D S ++L+SN+++A+ +WD     R +M+
Sbjct: 673 VWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMR 732

Query: 824 RKNVKKDPAD---LIFAKVEGLIKR---------IKEG-----------GYVPDTDFVLL 860
            K  +K PA    +   K+     R         I+ G           GY PDT FVL 
Sbjct: 733 EKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLH 792

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPL----------YA-------- 902
           +VEE  K+  L++HS KLA  YG++ T P   I   K  L          YA        
Sbjct: 793 EVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDI 852

Query: 903 -----NRFHHLRDGMCPCAD 917
                + FH   +G C C D
Sbjct: 853 FLRDSSGFHCFSNGQCSCKD 872



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 171/661 (25%), Positives = 290/661 (43%), Gaps = 117/661 (17%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
            G   HA  L ++     F+ N L+++Y++  S   A +LF+++P RD+ SWN+I++A  
Sbjct: 183 FGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAAL 242

Query: 131 HSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
                +       FRLFR+++ +  F     TL+ LL    +S  +   + VH +A+K+G
Sbjct: 243 QDSLYDT-----AFRLFRNMQATDAFRVDDFTLSILLT---ASASLMEGQQVHAHAVKLG 294

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D  V   L+  YSKFG + + ++LF+GM+ RDV+ W  M+ AY E G          
Sbjct: 295 LETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGL--------- 345

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
                        V   L V  ++ ++                   N V +N  L+G+ +
Sbjct: 346 -------------VNLALKVFDEMPEK-------------------NSVSYNTVLAGFCR 373

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 A+  FV M+   ++    +    + A     +  + +Q+HG  +K GF S   V
Sbjct: 374 NEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYV 433

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
             +L++MY++    CG   D    A  +     L E                    S V 
Sbjct: 434 EAALLDMYTR----CGRMVD----AGKMFLRWELEE------------------FSSVVW 467

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TA+I  Y RNG   EA YLF                   +  +  K +            
Sbjct: 468 TAMICGYARNGQPEEAIYLFH------------------VGRSDGKVI------------ 497

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +DE+  A+ +  CG +  L  GKQ+H + +K G   +L V + ++ MY KCG++ DA  +
Sbjct: 498 MDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKV 557

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA--SSCLT 607
           F D+P  D V W T+ISG + + + D AL I+ +M   G+ P++ TF +++ A   + L 
Sbjct: 558 FGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLN 617

Query: 608 ALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WN 663
            ++  R +  ++    +++ +S  +   S + +    G +++A      M  + + L W 
Sbjct: 618 LVDDCRNLFNSMRTVYQIEPTSRHYA--SFISVLGHWGLLQEALETINNMPFQPSALVWR 675

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
            +L G   H N  E +  +       +EP D  TFI V +  S +G    +      MRE
Sbjct: 676 VLLDGCRLHKN--ELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMRE 733

Query: 723 K 723
           K
Sbjct: 734 K 734



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 262/592 (44%), Gaps = 73/592 (12%)

Query: 256 LCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
           L P+  S+   L V S  G  H  + V A     LL  +  +  L N  +S YL++    
Sbjct: 60  LPPESHSLLHALHVSSRSGDTHLAKTVHA----TLLKRDEEDTHLSNALISTYLKLNLFP 115

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            A+  F+++   NV   S T L++         L+  +Q H                  +
Sbjct: 116 HALRLFLSLPSPNVV--SYTTLISF--------LSKHRQHHA-----------------L 148

Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
           +++ +M     L  +++T  +VL A SSL    H   Q+H  A+K       FV+ AL+ 
Sbjct: 149 HLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVS 208

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH-TSGERLDEI 493
           +Y ++ S   A  LF      D+A+WN +I   +  +    A  LF +M  T   R+D+ 
Sbjct: 209 LYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDF 268

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T++  + A   L+   +G+Q+HA+A+K G E DL V +G++  Y K G + D + +F  +
Sbjct: 269 TLSILLTASASLM---EGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGM 325

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMR----------LSGVVPDE---------- 593
              D + WT M++  ++ G  +LAL ++ +M           L+G   +E          
Sbjct: 326 RVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFV 385

Query: 594 -----------FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
                      F+   +V A   L   +  +Q+H   +K    S+ +V  +L+DMY +CG
Sbjct: 386 RMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCG 445

Query: 643 NIEDAYILFKQMDMR--NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIG 699
            + DA  +F + ++   ++V+W AM+ G A++G  EE + LF   ++ G V  D V    
Sbjct: 446 RMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAAS 505

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           +L  C   G +    +  H    K G+   +E  + +V    + G   +A ++   MP  
Sbjct: 506 MLGLCGTIGHLDMG-KQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCT 564

Query: 760 ASASMHRALLGAC-RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
              + +  + G     QGD     WV      ++P +   +VL+ + +   N
Sbjct: 565 DIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKP-NQVTFVLIISAYRQTN 615


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/535 (35%), Positives = 286/535 (53%), Gaps = 48/535 (8%)

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ++I  YC NG + +   LF+     ++ +W +MI G      S +AL LF  M   G  +
Sbjct: 124 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 183

Query: 491 DEI--TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
                T    + AC     L QG Q+HA+  K G+  D  +S+ ++  Y  C  M D+  
Sbjct: 184 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLR 243

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+     + V WT +++G   N + + AL ++ +M   GV+P++ +F   + +   L A
Sbjct: 244 VFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA 303

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           L+ GR+IH   +KL   +D FVG SL+ MY +CGN+ D  ++FK++  +N V WN+++VG
Sbjct: 304 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVG 363

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQHG G   L  F  M    VEPD +TF G+LSACS++G+  +    F    E    E 
Sbjct: 364 CAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEV 423

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +++HY+ +VD LGR+G+ +EA ELI +MP +A++ +   LL AC +    E  +  A+ +
Sbjct: 424 KLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCI 483

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------- 831
           + LEP  SSAYVLLSN++A+A++W DV+  R EMK++ + K P                 
Sbjct: 484 IDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSG 543

Query: 832 ------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                 +D I+ K+E L  ++KE GYVPD  F L DVE+E+KE  L YHSE+LA  +GLI
Sbjct: 544 DRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLI 603

Query: 886 STPPSSVILSNKE-----------PLYA------------NRFHHLRDGMCPCAD 917
           ST   S I   K             L A             RFHH  DG C C D
Sbjct: 604 STVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGD 658



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 220/498 (44%), Gaps = 36/498 (7%)

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           +I EA+ +FD +   DV L+ +M+  YA N   +    LF ++    +   +  ++    
Sbjct: 10  RIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFD 69

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSN 327
             +DL           A KL       +VV W   ++G+LQ G    A   F  M  R  
Sbjct: 70  C-ADL---------TMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI 119

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ------IHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             ++S+ +          D L L Q+      I  T++  G         +L      MG
Sbjct: 120 AAWNSMIYGYCCNGRV-EDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMG 178

Query: 382 CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           C   ++    T   V+ A ++    L+   QIH H  K     D+++S ALI  Y     
Sbjct: 179 CGVEVKPTSSTYCCVITACAN-ASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 237

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           M ++  +F  K   ++  W A++ GY L+     AL++F  M   G   ++ +  +A+ +
Sbjct: 238 MEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNS 297

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  L  L  G+++H  A+K G E D+ V + ++ MY +CG + D   IF  I   + V+W
Sbjct: 298 CCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSW 357

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL-- 619
            ++I GC  +G    AL+ ++QM  S V PDE TF  L+ A S     ++GR +      
Sbjct: 358 NSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 417

Query: 620 -----IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHG 673
                +KLD  +       +VD+  + G +E+A  L + M ++ N+++W  +L     H 
Sbjct: 418 NKSAEVKLDHYA------CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHS 471

Query: 674 N---GEETLKLFEDMKAH 688
                E   K   D++ H
Sbjct: 472 KLEVAERAAKCIIDLEPH 489



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 34/328 (10%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           +I  + RN  + EA  +F+     D+  +  MI GY  +     AL+LF  M       D
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK----D 56

Query: 492 EITIATAVKACGCLLMLKQGKQM----------HAYAMKSGF------EL---------- 525
            ++  + +K C     L   +++              M +GF      E+          
Sbjct: 57  VVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF 116

Query: 526 -DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D+   + ++  Y   G + D   +F ++P  + ++WT+MI G   +G  + AL ++ QM
Sbjct: 117 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 176

Query: 585 RLSG--VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
              G  V P   T+  ++ A +  +AL QG QIHA++ KL  S D ++  +L+  YA C 
Sbjct: 177 MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK 236

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            +ED+  +F      N V+W A++ G   +   E+ LK+F +M   GV P+  +F   L+
Sbjct: 237 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 296

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEV 730
           +C     +    E  H    K G+E +V
Sbjct: 297 SCCGLEALDWGRE-IHTAAVKLGLETDV 323



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/533 (21%), Positives = 219/533 (41%), Gaps = 107/533 (20%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + +    PD +L   ++T Y+R     +A +LF +MP +D++SWNS++      G  +  
Sbjct: 17  VFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMI-----KGCFDCA 71

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV-HGYALKIGLVWDEFVS 197
           ++T   +LF  + E     S ++   ++   L  G +  +E + +    +    W+  + 
Sbjct: 72  DLTMARKLFDEMPER----SVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIY 127

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-- 255
           G   N     G++ +   LF  M  R+V+ W  M+    ++G  EE   LF  +   G  
Sbjct: 128 GYCCN-----GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182

Query: 256 LCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKL-------------LLYNN-------- 293
           + P   +  CV+   ++    ++  Q+ A+  KL               Y N        
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242

Query: 294 -------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                  + NVV+W   ++GY     +  A++ F  M+R  V  +  +F  AL +  G +
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 302

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
            L+ G++IH   +K G  + V VGNSLI MY + G                    +L +G
Sbjct: 303 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCG--------------------NLNDG 342

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           + + K+I   + KN                                    + +WN++I G
Sbjct: 343 VVIFKRI---SKKN------------------------------------IVSWNSVIVG 363

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY-AMKSGFEL 525
                    AL  F+ M  S    DEIT    + AC    M ++G+ +  Y +     E+
Sbjct: 364 CAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEV 423

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLA 577
            L   + ++D+  + G + +A+ +  ++P   + + W  ++S C  + + ++A
Sbjct: 424 KLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVA 476



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 141/354 (39%), Gaps = 79/354 (22%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           W S+++     +DL + +     +   S +    + N  +      G +  A  LF KMP
Sbjct: 60  WNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQF----GKIEVAEGLFYKMP 115

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRL------------- 160
            RD+ +WNS++  Y  +G      V +G RLF+ +  R  I++TS +             
Sbjct: 116 FRDIAAWNSMIYGYCCNGR-----VEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEAL 170

Query: 161 ------------------TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
                             T   ++  C ++  ++    +H +  K+G  +D ++S AL+ 
Sbjct: 171 GLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALIT 230

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            Y+   ++ ++  +F G    +VV+W  ++  Y  N   E+   +F ++ R G+ P+  S
Sbjct: 231 FYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSS 290

Query: 263 VQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN------------------------ 293
               L         D G+    ++   A+KL L  +                        
Sbjct: 291 FTSALNSCCGLEALDWGR----EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIF 346

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                 N+V WN  + G  Q G    A+  F  M+RS V+ D +TF   L+A +
Sbjct: 347 KRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS 400



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 19/307 (6%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +SS +  ++    + S L  G   HA +       D +++  L+T Y+ C  +  + R+F
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 245

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCL 170
                 +++ W +++  Y  + +       +  ++F   +RE +        + L   C 
Sbjct: 246 HGKLHMNVVIWTALVTGYGLNCKHE-----DALKVFGEMMREGVLPNQSSFTSALNSCCG 300

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                W  E +H  A+K+GL  D FV  +L+ +Y + G + +   +F  + ++++V W  
Sbjct: 301 LEALDWGRE-IHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNS 359

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL 290
           ++   A++G G      F  + RS + PD+ +   +L   S  G   + +      K   
Sbjct: 360 VIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRC---LFKYFS 416

Query: 291 YNNNSNVVLWNKKLSGYLQVGD---NHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTD 346
            N ++ V     KL  Y  + D     G +E    +IR+  V+ +S+ +LV L+A     
Sbjct: 417 ENKSAEV-----KLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHS 471

Query: 347 NLNLGQQ 353
            L + ++
Sbjct: 472 KLEVAER 478


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 190/554 (34%), Positives = 287/554 (51%), Gaps = 49/554 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H H + N T+ D  ++  L+  Y ++ ++ +A  LF+     D  TW+ M+ G+  +
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +       F  +   G   D  T+   ++ C     L+ G+ +H   +K G   D  V 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD-NGEEDLALSIYHQMRLSGV 589
           + ++DMY KC  + DAQ +F  + + D V WT MI    D N  E L L  + +MR  GV
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVL--FDRMREEGV 197

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
           VPD+     +V A + L A+ + R  +  +++   S D  +G +++DMYAKCG++E A  
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F +M  +N + W+AM+     HG G++ + LF  M +  + P+ VTF+ +L ACS+ GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           + E    F+ M E++ + P+V+HY+ +VD LGRAGR  EA  LI +M  E    +  ALL
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
           GACR+    E  +  A  L+ L+P +   YVLLSNI+A A +W+ V   R  M ++ +KK
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437

Query: 830 DP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
            P                       +  I+  +  LIK+++  GYVPDTDFVL DVEEE 
Sbjct: 438 IPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEV 497

Query: 867 KERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------AN 903
           K+  LY HSEKLA A+GLI+ P    I  +K                           AN
Sbjct: 498 KQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDAN 557

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  DG C C D
Sbjct: 558 RFHHFNDGTCSCGD 571



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 157/296 (53%), Gaps = 6/296 (2%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           CG+  D +TL  V+R      + L + + IH   +K+  ++D FV  +L+D+Y +   + 
Sbjct: 95  CGVTPDNYTLPFVIRTCRDRTD-LQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVE 153

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A+ LFE     DL TW  MI  Y    N++++L LF  M   G   D++ + T V AC 
Sbjct: 154 DAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACA 212

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  + + +  + Y +++GF LD+ + + ++DMY KCG++  A+ +F+ +   + ++W+ 
Sbjct: 213 KLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSA 272

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI+    +G    A+ ++H M    ++P+  TF  L+ A S    +E+G +   ++ + +
Sbjct: 273 MIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE-E 331

Query: 624 CSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGE 676
            +  P V     +VD+  + G +++A  L + M + ++  LW+A+L     H   E
Sbjct: 332 HAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKME 387



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 110/216 (50%), Gaps = 6/216 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           ++R     +DL +G+  H  +L    + D F+  +L+ MY++C  +  A+RLF++M  +D
Sbjct: 107 VIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKD 166

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L++W  ++ AYA        N  E   LF  +RE      ++ +  ++  C   G +  +
Sbjct: 167 LVTWTVMIGAYADC------NAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRA 220

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
              + Y ++ G   D  +  A++++Y+K G +  A+ +FD M+E++V+ W  M+ AY  +
Sbjct: 221 RFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYH 280

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           G G++   LF  +    + P+  +   +L   S  G
Sbjct: 281 GRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAG 316



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 173/400 (43%), Gaps = 52/400 (13%)

Query: 63  AISTSDLLLG-------KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           A S  DLLL        +  HA ++ +  + D  + N L+  Y++  ++  A  LFD + 
Sbjct: 3   AESCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT 62

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            RD  +W+ ++  +A +G+      T     FR L          TL  +++ C     +
Sbjct: 63  MRDSKTWSVMVGGFAKAGDHAGCYAT-----FRELLRCGVTPDNYTLPFVIRTCRDRTDL 117

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +H   LK GL+ D FV  +LV++Y+K   + +A+ LF+ M  +D+V W VM+ AY
Sbjct: 118 QIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAY 177

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
           A+    E +  LF  +   G+ PD  ++  V+   + LG  H  +   +A   ++ N  S
Sbjct: 178 ADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRAR---FANDYIVRNGFS 233

Query: 296 -NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            +V+L    +  Y + G    A E F  M   NV    +++   +AA             
Sbjct: 234 LDVILGTAMIDMYAKCGSVESAREVFDRMKEKNV----ISWSAMIAAYG----------Y 279

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLHLSK 411
           HG             G   I+++  M   C +  ++ T  S+L A S    + EGL    
Sbjct: 280 HGR------------GKDAIDLFHMM-LSCAILPNRVTFVSLLYACSHAGLIEEGLRFFN 326

Query: 412 QI-HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            +   HA++ D        T ++D+  R G + EA  L E
Sbjct: 327 SMWEEHAVRPDVKH----YTCMVDLLGRAGRLDEALRLIE 362



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/322 (20%), Positives = 136/322 (42%), Gaps = 45/322 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W+  + G+ + GD+ G    F  ++R  V  D+ T    +       +L +G+ IH   L
Sbjct: 69  WSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVL 128

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV---------------------------C-------- 384
           K G  S   V  SL++MY+K   V                           C        
Sbjct: 129 KHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVL 188

Query: 385 -------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                  G+  D+  + +V+ A + L   +H ++  + + ++N    D  + TA+ID+Y 
Sbjct: 189 FDRMREEGVVPDKVAMVTVVNACAKLG-AMHRARFANDYIVRNGFSLDVILGTAMIDMYA 247

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + GS+  A  +F+     ++ +W+AMI  Y        A++LF  M +     + +T  +
Sbjct: 248 KCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVS 307

Query: 498 AVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
            + AC    ++++G +  ++   +     D+   + ++D+  + G + +A  +   +   
Sbjct: 308 LLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVE 367

Query: 556 PDDVAWTTMISGCVDNGEEDLA 577
            D+  W+ ++  C  + + +LA
Sbjct: 368 KDERLWSALLGACRIHSKMELA 389


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 193/557 (34%), Positives = 292/557 (52%), Gaps = 51/557 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRN---GSMAEAEYLFENKDGFDLATWNAMIFGY 467
           KQI  + IK     +  V T LI+    N    SM  A  +F+     D+  +N M  GY
Sbjct: 52  KQIQAYTIKTHQ-NNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGY 110

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
              ++  +A+ L S +  SG   D+ T ++ +KAC  L  L++GKQ+H  A+K G   ++
Sbjct: 111 ARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNM 170

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V   +++MY  C  +  A+ +F+ I  P  VA+  +I+ C  N   + AL+++ +++ S
Sbjct: 171 YVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQES 230

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+ P + T  + + + + L AL+ GR IH  + K        V  +L+DMYAKCG+++DA
Sbjct: 231 GLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDA 290

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +FK M  R+T  W+AM+V  A HG+G + + +  +MK   V+PD +TF+G+L ACS+T
Sbjct: 291 VSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHT 350

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV E YE FH M  +YGI P ++HY  ++D LGRAGR +EA + I  +P + +  + R 
Sbjct: 351 GLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRT 410

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL +C   G+ E  K V +++  L+      YV+LSN+ A   +WDDV   R  M  K  
Sbjct: 411 LLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGA 470

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL-DVE 863
            K P                       + ++   ++ L+K +K  GYVPDT  V   D+E
Sbjct: 471 LKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIE 530

Query: 864 EEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA--------------------- 902
           +EEKE  L YHSEKLA  YGL++TPP + I   K                          
Sbjct: 531 DEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILR 590

Query: 903 --NRFHHLRDGMCPCAD 917
              RFHH +DG C C D
Sbjct: 591 DVQRFHHFKDGKCSCGD 607



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 163/312 (52%), Gaps = 9/312 (2%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D +T +S+L+A + L + L   KQ+H  A+K     + +V   LI++Y     +  
Sbjct: 130 GLLPDDYTFSSLLKACARL-KALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDA 188

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+      +  +NA+I     ++  ++AL LF  +  SG +  ++T+  A+ +C  
Sbjct: 189 ARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCAL 248

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  G+ +H Y  K+GF+  + V++ ++DMY KCG++ DA S+F D+P  D  AW+ M
Sbjct: 249 LGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAM 308

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I     +G    A+S+  +M+ + V PDE TF  ++ A S    +E+G +   ++   + 
Sbjct: 309 IVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTH-EY 367

Query: 625 SSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGEET--- 678
              P +     ++D+  + G +E+A     ++ ++ T +LW  +L   + HGN E     
Sbjct: 368 GIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLV 427

Query: 679 -LKLFEDMKAHG 689
             ++FE   +HG
Sbjct: 428 IQRIFELDDSHG 439



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 9/219 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+       L  GK  H   +      + ++   L+ MY+ C  +  ARR+FDK+ + 
Sbjct: 140 SLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEP 199

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++++N+I+ + A +   N     E   LFR L+ES    + +T+   L  C   G +  
Sbjct: 200 CVVAYNAIITSCARNSRPN-----EALALFRELQESGLKPTDVTMLVALSSCALLGALDL 254

Query: 178 SETVHGYALKIGLVWDEFV--SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              +H Y  K G  +D++V  + AL+++Y+K G + +A  +F  M  RD   W  M+ AY
Sbjct: 255 GRWIHEYVKKNG--FDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAY 312

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           A +G G +   +  ++ ++ + PD+ +   +L   S  G
Sbjct: 313 ATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTG 351



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 145/361 (40%), Gaps = 40/361 (11%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN--NLMTMYSRCGSLVYARRL 110
           SS   S++    S  +L   K   A  + + Q     LT   N  T      S+ +A R+
Sbjct: 35  SSSILSLIPKCTSLREL---KQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRM 91

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           FDK+P  D++ +N++   YA       ++      L   +  S       T + LLK C 
Sbjct: 92  FDKIPQPDIVLFNTMARGYA-----RFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACA 146

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
               +   + +H  A+K+G+  + +V   L+N+Y+    +  A+ +FD + E  VV +  
Sbjct: 147 RLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNA 206

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKRHEEQVQAYA 285
           ++ + A N    E   LF +L  SGL P D ++      C L    DLG+   E V+   
Sbjct: 207 IITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNG 266

Query: 286 IKLLLYNNNSNVVL------------------------WNKKLSGYLQVGDNHGAIECFV 321
               +  N + + +                        W+  +  Y   G    AI    
Sbjct: 267 FDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLR 326

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLG-QQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            M ++ VQ D +TFL  L A + T  +  G +  H  T + G   ++     +I++  + 
Sbjct: 327 EMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRA 386

Query: 381 G 381
           G
Sbjct: 387 G 387


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 240/878 (27%), Positives = 384/878 (43%), Gaps = 206/878 (23%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P+   +N  +T + R G +  A RLF  MP R   ++N++LA Y+ +G            
Sbjct: 36  PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG------------ 83

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
                        RL LA  L   +                      D +    L++  +
Sbjct: 84  -------------RLPLAASLFRAIPRP-------------------DNYSYNTLLHALA 111

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
               + +A+ LFD M  RD V + VM+ ++A +G      H F       L P+ ++V  
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF------DLAPEKDAVS- 164

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                             WN  L+ Y++    +G +E    +  
Sbjct: 165 ----------------------------------WNGMLAAYVR----NGRVEEARGLFN 186

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S  ++D++++   ++       ++  +++            V+  N +++ Y++ G +  
Sbjct: 187 SRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRD----VVSWNIMVSGYARRGDMVE 242

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R          R   + P                  V D F  TA++  Y +NG + EA
Sbjct: 243 AR----------RLFDAAP------------------VRDVFTWTAVVSGYAQNGMLEEA 274

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     +  +WNAM+  YI      +A ELF+ M                      
Sbjct: 275 RRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR------------------- 315

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
                               ++   + +L  Y + G + +A+++F+ +P  D V+W  M+
Sbjct: 316 --------------------NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +     G  +  L ++ +M   G   +   FA ++   + + ALE G Q+H  LI+    
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
              FVG +L+ MY KCGN+EDA   F++M+ R+ V WN M+ G A+HG G+E L++F+ M
Sbjct: 416 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 475

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +    +PD +T +GVL+ACS++GLV +    F+ M   +G+  + EHY+ ++D LGRAGR
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGR 535

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA +L+  MPFE  ++M  ALLGA R+  + E G+  AEK+  LEP ++  YVLLSNI
Sbjct: 536 LAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNI 595

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +A++ +W D    R  M+ + VKK P                        + I+A +E L
Sbjct: 596 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY- 901
             R+K+ GYV  TD VL DVEEEEKE  L YHSEKLA AYG+++ PP   I   K     
Sbjct: 656 DMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVC 715

Query: 902 ----------------------ANRFHHLRDGMCPCAD 917
                                 +NRFHH R G C C D
Sbjct: 716 GDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGD 753



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 226/524 (43%), Gaps = 82/524 (15%)

Query: 57  FSILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           ++ L HA++ S  L      AR + +   + D    N +++ ++  G +  AR  FD  P
Sbjct: 103 YNTLLHALAVSSSL----ADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE--SITFTSRLTLAPLLKLCLSSG 173
           ++D +SWN +LAAY  +G      V E   LF S  E  +I++ +           L SG
Sbjct: 159 EKDAVSWNGMLAAYVRNGR-----VEEARGLFNSRTEWDAISWNA-----------LMSG 202

Query: 174 YV-W-----ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           YV W     A E       +  + W+  VSG     Y++ G + EA+ LFD    RDV  
Sbjct: 203 YVQWGKMSEARELFDRMPGRDVVSWNIMVSG-----YARRGDMVEARRLFDAAPVRDVFT 257

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
           W  ++  YA+NG  EE   +F  +      P+  +V     V + + +R  ++ +    +
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAK----E 307

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
           L       NV  WN  L+GY Q G    A   F  M     Q D+V++   LAA      
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM----PQKDAVSWAAMLAA------ 357

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
                           YS        + ++ +MG  CG   ++   A VL   + +   L
Sbjct: 358 ----------------YSQGGCSEETLQLFIEMG-RCGEWVNRSAFACVLSTCADIA-AL 399

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
               Q+H   I+       FV  AL+ +Y + G+M +A   FE  +  D+ +WN MI GY
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSG 522
                  +ALE+F  M T+  + D+IT+   + AC    ++++G        H + + + 
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
            E   C    ++D+  + G + +A  +  D+P  PD   W  ++
Sbjct: 520 PEHYTC----MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 9/201 (4%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F++        + S +  +L      + L  G   H R++ +      F+ N L+ 
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CG++  AR  F++M +RD++SWN+++A YA  G G      E   +F  +R + T 
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK-----EALEIFDMMRTTSTK 481

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYAL--KIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +TL  +L  C  SG V      + Y++    G+         ++++  + G++ EA 
Sbjct: 482 PDDITLVGVLAACSHSGLV-EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAH 540

Query: 215 FLFDGMQ-ERDVVLWKVMLRA 234
            L   M  E D  +W  +L A
Sbjct: 541 DLMKDMPFEPDSTMWGALLGA 561



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 17/235 (7%)

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            E ++  S+  +  +++ G + DA+ +F  +P      +  M++G   NG   LA S++ 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            +      PD +++  L+ A +  ++L   R +   +   D  +       ++  +A  G
Sbjct: 94  AI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV----MISSHANHG 145

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            +  A   F     ++ V WN ML    ++G  EE   LF        E D++++  ++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR----TEWDAISWNALMS 201

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
                G +SEA E F  M  +     +V  ++ +V    R G   EA  L  + P
Sbjct: 202 GYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAP 251


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 201/583 (34%), Positives = 313/583 (53%), Gaps = 61/583 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG---S 441
           G   D++T++S++ A + L   + L  Q+H  A++    +D+ VS  L+D+Y ++    +
Sbjct: 249 GFEPDRYTMSSMISACTELGS-VRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQA 307

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHMHTSGERLDEITIATAVK 500
           M  A  +FE     D+ +W A+I GY+ S    +K + LF  M     + + IT ++ +K
Sbjct: 308 MDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILK 367

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           +C  +     G+Q+HA+ +KS       V + ++ MY + G M +A+ +FN +       
Sbjct: 368 SCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL------- 420

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           +   +  C+  G +     + H++    V     TFA L+ A++ +  L +G+Q+HA  +
Sbjct: 421 YERSMIPCITEGRD---FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSL 477

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           K    SD FV  SLV MY++CG +EDA   F ++  RN + W +M+ GLA+HG  E  L 
Sbjct: 478 KAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALS 537

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           LF DM   GV+P+ VT+I VLSACS+ GLV E  E F  M+  +G+ P +EHY+ +VD L
Sbjct: 538 LFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLL 597

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
            R+G  KEA E I  MP +A A + + LLGACR   + E G+  A+ ++ LEP D + YV
Sbjct: 598 ARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYV 657

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFA 837
           LLSN++A A  WD+V   R  M+  N+ K+                        A  I+ 
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYG 717

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST--PPSSVILS 895
           K++ L+++IK  GYVPDT  VL D+ +E KE+ L  HSEK+A A+GLI+T  P    I  
Sbjct: 718 KLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFK 777

Query: 896 N-------------------KEPLY--ANRFHHLRDGMCPCAD 917
           N                   +E +   +NRFH ++DG C C +
Sbjct: 778 NLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGE 820



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 156/631 (24%), Positives = 276/631 (43%), Gaps = 87/631 (13%)

Query: 11  PRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL 70
           PR         S    T+   P  SL+  P L  SH S  S+          A    DL 
Sbjct: 13  PRQPPPPPPPPSPPNSTFPRYPR-SLAAHPALSSSHPSDVSALLA------AAARAGDLR 65

Query: 71  LGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAA 128
           LG++ H R+L    +  D  + N+L+T+YSRCG++  AR +FD M   RD++SW ++ + 
Sbjct: 66  LGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASC 125

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-YVWASETVHGYALK 187
            A +G            L   + ES    +  TL      C     Y      V G   K
Sbjct: 126 LARNGAERGS-----LLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHK 180

Query: 188 IGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +GL W  D  V  AL+++ ++ G +  A+ +FDG+ E+ VV+W +++  Y +    EE  
Sbjct: 181 MGL-WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLG------------------------------- 274
            LF+D    G  PD  ++  ++   ++LG                               
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMY 299

Query: 275 -KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG-DNHGAIECFVNMIRSNVQYDS 332
            K +  Q   YA K+      ++V+ W   +SGY+Q G   +  +  F  M+  +++ + 
Sbjct: 300 AKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNH 359

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------- 383
           +T+   L + A   + + G+Q+H   +KS   SA  VGN+L++MY++ GC+         
Sbjct: 360 ITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ 419

Query: 384 --------CGLRTDQF----------------TLASVLRASSSLPEGLHLSKQIHVHAIK 419
                   C      F                T AS++ A++S+   L   +Q+H  ++K
Sbjct: 420 LYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGM-LTKGQQLHAMSLK 478

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +D FVS +L+ +Y R G + +A   F      ++ +W +MI G      + +AL L
Sbjct: 479 AGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSL 538

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYV 538
           F  M  +G + +++T    + AC  + ++++GK+   +     G    +   + ++D+  
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           + G + +A    N++P   D + W T++  C
Sbjct: 599 RSGIVKEALEFINEMPLKADALVWKTLLGAC 629



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 169/329 (51%), Gaps = 15/329 (4%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  V +ALID+  RNG +A A  +F+      +  W  +I  Y+    + +A+ELF    
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG--- 541
             G   D  T+++ + AC  L  ++ G Q+H+ A++ G   D CVS G++DMY K     
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNG-EEDLALSIYHQMRLSGVVPDEFTFAILV 600
           AM  A  +F  +P  D ++WT +ISG V +G +E+  ++++ +M    + P+  T++ ++
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
           K+ + ++  + GRQ+HA++IK + +S   VG +LV MYA+ G +E+A  +F Q       
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ------- 419

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           L+   ++     G       L   +    V   S TF  ++SA +  G++++  +  H M
Sbjct: 420 LYERSMIPCITEG---RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKG-QQLHAM 475

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             K G   +    + LV    R G  ++A
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 10/210 (4%)

Query: 508 LKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMI 565
           L+ G+ +H   ++    + D  V++ +L +Y +CGA+  A+++F+ +    D V+WT M 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS-----SCLTALEQGRQIHANLI 620
           S    NG E  +L +  +M  SG++P+ +T      A       CL        +H   +
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
                +D  VG +L+DM A+ G++  A  +F  +  +  V+W  ++    Q    EE ++
Sbjct: 184 ---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           LF D    G EPD  T   ++SAC+  G V
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSV 270


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/579 (33%), Positives = 314/579 (54%), Gaps = 54/579 (9%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           DQ  + S+L+ S  + + L     IH   I+N    D F+   L+    +  ++  A  +
Sbjct: 38  DQKQIISLLQRSRHINQVL----PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 93

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     ++  + A+I G++ S N  +A++L+S M       D   +A+ +KACG  L L
Sbjct: 94  FQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLAL 153

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP----APDDVAWTTM 564
           ++G+++H+ A+K GF  +  V   I+++Y KCG + DA+ +F ++P    A D V WT M
Sbjct: 154 REGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 213

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G V N E + AL  +  M+   V P+EFT   ++ A S L ALE GR +H+ + K + 
Sbjct: 214 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 273

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + FVG +L++MY++CG+I++A  +F +M  R+ + +N M+ GL+ +G   + ++LF  
Sbjct: 274 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 333

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M    + P +VTF+GVL+ACS+ GLV   +E FH M   Y +EP++EHY  +VD LGR G
Sbjct: 334 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVG 393

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R +EA +LI +M       M   LL AC++  + E G+ VA++L      DS  YVLLS+
Sbjct: 394 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSH 453

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           ++A++ +W +    R +MK   ++K+P                        + I+ K+E 
Sbjct: 454 VYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEE 513

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--LSNKEP 899
           L + ++  GY P+ + VL D+E+ EKE AL  HSE+LA  YGLIST P ++I  + N   
Sbjct: 514 LNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRV 573

Query: 900 LY---------------------ANRFHHLRDGMCPCAD 917
            Y                      NRFH+  +G C C D
Sbjct: 574 CYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGD 612



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 9/221 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           SIL+   S   L  G+  H+R L      +R +   +M +Y +CG L  ARR+F++MP+ 
Sbjct: 142 SILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 201

Query: 117 ---RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
              +D + W +++  +  + E N          FR ++      +  T+  +L  C   G
Sbjct: 202 VVAKDTVCWTAMIDGFVRNEETN-----RALEAFRGMQGENVRPNEFTIVCVLSACSQLG 256

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     VH Y  K  +  + FV  AL+N+YS+ G I EA+ +FD M++RDV+ +  M+ 
Sbjct: 257 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 316

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             + NG   +   LF  +    L P + +   VL   S  G
Sbjct: 317 GLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGG 357



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 164/394 (41%), Gaps = 51/394 (12%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA ++  Y +N NV L+   + G++  G+   AI+ +  M+  ++  D+      L A  
Sbjct: 89  YASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACG 148

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------CV 383
               L  G+++H   LK GF S  +V   ++ +Y K G                     V
Sbjct: 149 SQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTV 208

Query: 384 C---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           C                            +R ++FT+  VL A S L   L + + +H +
Sbjct: 209 CWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG-ALEIGRWVHSY 267

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             K +   + FV  ALI++Y R GS+ EA+ +F+     D+ T+N MI G  ++  S +A
Sbjct: 268 MRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQA 327

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILD 535
           +ELF  M     R   +T    + AC    ++  G ++ H+ A     E  +     ++D
Sbjct: 328 IELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVD 387

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +  + G + +A  +   +   PD +   T++S C  +   +L   +  ++   G   D  
Sbjct: 388 LLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQA-DSG 446

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           T+ +L    +     ++  Q+ A + +     +P
Sbjct: 447 TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 480



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/462 (22%), Positives = 195/462 (42%), Gaps = 66/462 (14%)

Query: 39  LPFL---QKSHFSSSSS--------SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           LPF     K H +S+S+          Q  S+L+ +   + +L     HA+++ +    D
Sbjct: 14  LPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVL---PIHAQLIRNGHSQD 70

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F+   L+   S+C ++ YA R+F    + ++  + +++  +  SG     N  E  +L+
Sbjct: 71  PFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG-----NYLEAIQLY 125

Query: 148 -RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
            R L ESI   + L +A +LK C S   +     VH  ALK+G   +  V   ++ +Y K
Sbjct: 126 SRMLHESILPDNYL-MASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGK 184

Query: 207 FGKIREAKFLFDGMQE----RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            G++ +A+ +F+ M E    +D V W  M+  +  N         F  +    + P++ +
Sbjct: 185 CGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFT 244

Query: 263 VQCVLGVISDLGKRH-----EEQVQAYAIKLLLYNNNS---------------------- 295
           + CVL   S LG           ++ + I+L L+  N+                      
Sbjct: 245 IVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK 304

Query: 296 --NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             +V+ +N  +SG    G +  AIE F  M+   ++  +VTF+  L A +    ++ G +
Sbjct: 305 DRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFE 364

Query: 354 I-HGTTLKSGFYSAVIVGNSLINMYSKMGCV---------CGLRTDQFTLASVLRASSSL 403
           I H           +     ++++  ++G +           +  D   L ++L A   +
Sbjct: 365 IFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA-CKM 423

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + L L +Q+    +++   ADS     L  VY  +G   EA
Sbjct: 424 HKNLELGEQV-AKELEDRGQADSGTYVLLSHVYASSGKWKEA 464


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 211/691 (30%), Positives = 356/691 (51%), Gaps = 100/691 (14%)

Query: 322 NMIRSNVQYD--SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY-S 378
           +MIR+ +  D  S + L A+AA++   +L   +++     +   ++     N+LI  Y S
Sbjct: 53  HMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFT----WNTLIRAYAS 108

Query: 379 KMGCVCGL-------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
               VC +               +++T   +++A++ +   L L + +H  AIK+   +D
Sbjct: 109 GPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEV-SSLSLGQSLHGMAIKSAVGSD 167

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            FV+ +LI  Y   G +  A  +F      D+ +WN+MI G++   +  KALELF  M +
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
              +   +T+   + AC  +  L+ G+++ +Y  ++   ++L +++ +LDMY KCG++ D
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287

Query: 546 AQSIFNDIPAPDDVAWTTMISGCV-------------------------------DNGEE 574
           A+ +F+ +   D+V WTTM+ G                                  NG+ 
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKP 347

Query: 575 DLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
           + AL ++H+++L   +  ++ T    + A + + ALE GR IH+ + K     + +V  +
Sbjct: 348 NEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSA 407

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+ MY+KCG++E A  +F  ++ R+  +W+AM+ GLA HG G E + +F  M+   V+P+
Sbjct: 408 LIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPN 467

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
            VTF  V  ACS+TGLV EA   F+ M   YGI PE +HY+ +VD LGR+G  ++A + I
Sbjct: 468 GVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFI 527

Query: 754 LSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWD 813
            +MP   S S+  ALLGAC++  +    +    +L+ LEP +  A+VLLSNI+A + +WD
Sbjct: 528 EAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWD 587

Query: 814 DVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGG 850
           +V+  R  M+   +KK+P                       ++ ++ K+  +++++K  G
Sbjct: 588 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 647

Query: 851 YVPDTDFVLLDVEEEE-KERALYYHSEKLARAYGLISTPPSSVI---------------- 893
           Y P+   VL  +EEEE KE++L  HSEKLA  YGLIST     I                
Sbjct: 648 YEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVA 707

Query: 894 -----LSNKEPLYAN--RFHHLRDGMCPCAD 917
                L N+E +  +  RFHH R+G C C D
Sbjct: 708 KLISQLYNREIIVRDRYRFHHFRNGQCSCND 738



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 238/531 (44%), Gaps = 39/531 (7%)

Query: 61  RHAIS----TSDLLLGKSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKM 114
           RH IS     S L   K THA ++ +    D +  + L  +   S   SL YAR++FD++
Sbjct: 32  RHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEI 91

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P  +  +WN+++ AYA SG     ++     +  S  ES  + ++ T   L+K       
Sbjct: 92  PQPNSFTWNTLIRAYA-SGPDPVCSIWAFLDMVSS--ESQCYPNKYTFPFLIKAAAEVSS 148

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   +++HG A+K  +  D FV+ +L++ Y   G +  A  +F  ++E+DVV W  M+  
Sbjct: 149 LSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 208

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN- 293
           + + G  ++   LF  +    +     S   ++GV+S   K  + +        +  N  
Sbjct: 209 FVQKGSPDKALELFKKMESEDV---KASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRV 265

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N N+ L N  L  Y + G    A   F  M     + D+VT+   L   A +++    ++
Sbjct: 266 NVNLTLANAMLDMYTKCGSIEDAKRLFDAM----EEKDNVTWTTMLDGYAISEDYEAARE 321

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG-------------CVCGLRTDQFTLASVLRAS 400
           +     K      ++  N+LI+ Y + G                 ++ +Q TL S L A 
Sbjct: 322 VLNAMPKKD----IVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSAC 377

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           + +   L L + IH +  KN    + +V++ALI +Y + G + +A  +F + +  D+  W
Sbjct: 378 AQVG-ALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVW 436

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           +AMI G  +     +A+++F  M  +  + + +T      AC    ++ + + +  Y M+
Sbjct: 437 SAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF-YKME 495

Query: 521 SGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
           S + +  +    + I+D+  + G +  A      +P P   + W  ++  C
Sbjct: 496 SSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 546



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 165/373 (44%), Gaps = 63/373 (16%)

Query: 21  SSFTKDT----YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS-------ILRHAISTSDL 69
           +SFT +T    Y + P    S+  FL        SS SQ +        +++ A   S L
Sbjct: 95  NSFTWNTLIRAYASGPDPVCSIWAFLDMV-----SSESQCYPNKYTFPFLIKAAAEVSSL 149

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            LG+S H   + S+   D F+ N+L+  Y  CG L  A ++F  + ++D++SWNS++  +
Sbjct: 150 SLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 209

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G  +     +   LF+ +       S +T+  +L  C     +     V  Y  +  
Sbjct: 210 VQKGSPD-----KALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR 264

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           +  +  ++ A++++Y+K G I +AK LFD M+E+D V W  ML  YA             
Sbjct: 265 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA------------- 311

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
                 +  D E+ + VL  +                         ++V WN  +S Y Q
Sbjct: 312 ------ISEDYEAAREVLNAMP----------------------KKDIVAWNALISAYEQ 343

Query: 310 VGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
            G  + A+  F  + ++ N++ + +T +  L+A A    L LG+ IH    K+G      
Sbjct: 344 NGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFY 403

Query: 369 VGNSLINMYSKMG 381
           V ++LI+MYSK G
Sbjct: 404 VTSALIHMYSKCG 416



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S L        L LG+  H+ I  +    + ++T+ L+ MYS+CG L  AR +F+ +  R
Sbjct: 372 STLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+  W++++   A  G G     +E   +F  ++E+    + +T   +   C  +G V  
Sbjct: 432 DVFVWSAMIGGLAMHGCG-----SEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 486

Query: 178 SETV-HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           +E++ +      G+V ++     +V++  + G + +A    + M       +W  +L A
Sbjct: 487 AESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 545


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 202/566 (35%), Positives = 305/566 (53%), Gaps = 55/566 (9%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S SL +GL    Q+H H +K        VS  LI++Y +      +  +F+        T
Sbjct: 38  SRSLRQGL----QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTT 93

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+++I  +  +     AL+ F  M   G R D+    +A KACG L     GK +H  A+
Sbjct: 94  WSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAV 153

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC--VDNGEEDLA 577
           K+G+  D+ V S ++DMY KCG + DA+ +F+++P  + V+W+ MI G   +D+G E  A
Sbjct: 154 KTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE--A 211

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L+++ Q  +  V  ++FTF+ +++  S  T LE G+ IH   +K+   S  FVG +L+ +
Sbjct: 212 LTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISL 271

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KCG IE AY +F ++  RN  LWN+ML+  AQH + +    LFE+M   G++P+ + F
Sbjct: 272 YSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXF 331

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + VL ACS+ GLV +  E F LMR+ YGIEPE EHY+ LVD LGRAG+ +EA  +I  MP
Sbjct: 332 LSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMP 390

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
              + S+  ALL  CR+  DTE   +VA++++ ++   S  +VLLSN +AAA ++++   
Sbjct: 391 MRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAAR 450

Query: 818 ARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPD 854
            R  ++ + VKK+                           I+ K+E L + +++ GYV D
Sbjct: 451 MRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVAD 510

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA------------ 902
           T FVL  V+ EEK   + YHSE+LA A+GLI+ PP   I   K                 
Sbjct: 511 TSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSK 570

Query: 903 -----------NRFHHLRDGMCPCAD 917
                      NRFH   DG C C D
Sbjct: 571 CCGRVLIVRDNNRFHRFEDGKCSCGD 596



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 5/189 (2%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GKS H   + +    D F+ ++L+ MY++CG +  AR LFD+MP+R+++SW+ ++  YA
Sbjct: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYA 203

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
              +G      E   LF+         +  T + ++++C SS ++   + +HG  LK+  
Sbjct: 204 QLDDG-----VEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSF 258

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
               FV  AL+++YSK G I  A  +FD +  R++ LW  ML A A++   + VF LF +
Sbjct: 259 DSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEE 318

Query: 251 LHRSGLCPD 259
           +   G+ P+
Sbjct: 319 MGNVGMKPN 327



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 147/344 (42%), Gaps = 45/344 (13%)

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           + Q+  +++++       +   W+  +S + Q      A++ F  M+   V+ D   +  
Sbjct: 72  KTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPS 131

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR---------- 387
           A  A       ++G+ +H   +K+G+Y  V VG+SL++MY+K G +   R          
Sbjct: 132 ATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERN 191

Query: 388 ---------------------------------TDQFTLASVLRASSSLPEGLHLSKQIH 414
                                             + FT +SV+R  SS    L L K IH
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS-STFLELGKLIH 250

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              +K    + SFV +ALI +Y + G +  A  +F+     +L  WN+M+       ++ 
Sbjct: 251 GLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQ 310

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +   LF  M   G + + I   + + AC    ++++G++  +     G E +    + ++
Sbjct: 311 RVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLV 370

Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           D+  + G + +A S+   +P  P +  W  +++GC  + + ++A
Sbjct: 371 DLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 11/186 (5%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           +  L  G   HA IL         +++NL+ +YS+    +++ ++FD+ P +   +W+S+
Sbjct: 38  SRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSV 97

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE---TVH 182
           ++A+A +     E      + FR +                K C   G++  S+   +VH
Sbjct: 98  ISAFAQN-----EAPLLALQFFRRMLNDGVRPDDHIYPSATKAC---GFLRRSDVGKSVH 149

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
             A+K G   D FV  +LV++Y+K G+I +A+ LFD M ER+VV W  M+  YA+   G 
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209

Query: 243 EVFHLF 248
           E   LF
Sbjct: 210 EALTLF 215



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 6/176 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   S++ L LGK  H   L  S     F+ + L+++YS+CG +  A ++FD++P R
Sbjct: 232 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 291

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L  WNS+L A A        +    F LF  +       + +    +L  C  +G V  
Sbjct: 292 NLGLWNSMLIACAQHA-----HTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEK 346

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV-VLWKVML 232
                      G+  +     +LV++  + GK++EA  +   M  R    +W  +L
Sbjct: 347 GREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 226/770 (29%), Positives = 377/770 (48%), Gaps = 110/770 (14%)

Query: 165 LLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
           LL+L ++ G + +A++   G  L+  + W+  + G     Y+    +  A   F+ M  R
Sbjct: 90  LLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFG-----YAASNDMVRASLCFEMMPTR 144

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           DVV W  ML  + + G   E   +F+++ RSG+  D++S   +L V S L + ++   Q 
Sbjct: 145 DVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSIL-ENYKLGTQI 203

Query: 284 YAIKLLL-YNNN-----------------------------SNVVLWNKKLSGYLQVGDN 313
           + I L + Y+ +                              N + W+  ++G +Q    
Sbjct: 204 HGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFL 263

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            G ++ F  M +  V      +   L + A   +L LG Q+H   LKS F    IV  + 
Sbjct: 264 DGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTAT 323

Query: 374 INMYSKMGCV-----------------------------CGLRT--------------DQ 390
           ++MY+K   +                              G R               D+
Sbjct: 324 LDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDE 383

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            +L+  LRA +++ +GL    Q+H  A K++   +  V+ A ID+Y +  ++ EA  +F+
Sbjct: 384 ISLSGALRACATV-KGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFD 442

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D  +WNA+I  +  +    K L +   M  SG   DE T  + +KAC     L  
Sbjct: 443 EMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGD-SLNH 501

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI-----------PAPDD- 558
           G ++H   +K G   +  + S ++DMY KCG + +A+ I N I             P+  
Sbjct: 502 GMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETI 561

Query: 559 ---------------VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
                          V+W  +ISG V   + + A   +++M   G+ PD+FT++ ++   
Sbjct: 562 EEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTC 621

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + L ++  G+QIHA++IK +   D ++  +LVDMY+KCGN+ D+ ++F++  +R+ V WN
Sbjct: 622 ANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWN 681

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           AM+ G A HG GEE +KLFE M    + P+  TF+ +L AC++ GLV    + FH+M+++
Sbjct: 682 AMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKE 741

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV-QGDTETGK 782
           YG++P +EHYS +VD LG++G  ++A ELI  MPFEA   + R LL AC++ + + E  +
Sbjct: 742 YGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAE 801

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             A  L+ L+P DSS Y+LLSNI+A A  WD  +  R  M+   +KK+P 
Sbjct: 802 VAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPG 851


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 224/760 (29%), Positives = 365/760 (48%), Gaps = 83/760 (10%)

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
           +TS  T   LLK C +   +   +T+HG  + +G  +D F++ +LVN+Y K G +  A  
Sbjct: 57  WTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQ 116

Query: 216 LFDGMQE-------RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           +FDG  +       RDV +W  M+  Y +    +E    F  +   G+ PD  S+  V+ 
Sbjct: 117 VFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVS 176

Query: 269 VISDLGK-RHEE--QVQAYAIK-----------------------------LLLYNNNSN 296
           V+   G  R EE  Q+  + ++                              +   + SN
Sbjct: 177 VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSN 236

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VVLWN  + G+   G    +++ ++    ++V+  S +F  AL A + ++N   G+QIH 
Sbjct: 237 VVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------CVCGLRTDQFT-------------- 392
             +K G ++   V  SL++MYSK G          CV   R + +               
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356

Query: 393 ---LASVLRASSSLPEGLHLS---------------KQIHVHAIKNDTVADSFVSTALID 434
              L   +R  S LP+   LS               K +H    K    + S + +AL+ 
Sbjct: 357 ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DE 492
           +Y + G   +A  +F++ +  D+  W ++I G   +    +AL++F  M    + L  D 
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
             + +   AC  L  L+ G Q+H   +K+G  L++ V S ++D+Y KCG    A  +F  
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +   + VAW +MIS    N   +L++ +++ M   G+ PD  +   ++ A S   +L +G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           + +H   ++L   SD  +  +L+DMY KCG  + A  +FK+M  ++ + WN M+ G   H
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+    L LF++MK  G  PD VTF+ ++SAC+++G V E    F  M++ YGIEP +EH
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD LGRAG  +EA   I +MP EA +S+   LL A R   + E G   AEKL+ +E
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P   S YV L N++  A   ++     G MK K + K P 
Sbjct: 777 PERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPG 816



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 190/779 (24%), Positives = 337/779 (43%), Gaps = 105/779 (13%)

Query: 41  FLQKSHFSSSSSSSQWF--------SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           +LQ  H  S    S  F        S+L+   + ++L  GK+ H  ++      D F+  
Sbjct: 40  YLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIAT 99

Query: 93  NLMTMYSRCGSLVYARRLFD-------KMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           +L+ MY +CG L YA ++FD        +  RD+  WNS++  Y            EG  
Sbjct: 100 SLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF-----KFRRFKEGVG 154

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE--TVHGYALKIGLVWDEFVSGALVNI 203
            FR +          +L+ ++ +    G     E   +HG+ L+  L  D F+  AL+++
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214

Query: 204 YSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           Y KFG   +A  +F  ++++ +VVLW VM+  +  +G  E    L++    + +     S
Sbjct: 215 YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274

Query: 263 VQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN---------------------------- 293
               LG  S         Q+    +K+ L+N+                            
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +  + +WN  ++ Y +    + A++ F  M + +V  DS T    ++  +     N G+ 
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGC-------------------------VC---- 384
           +H    K    S   + ++L+ +YSK GC                         +C    
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454

Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                            L+ D   + SV  A + L E L    Q+H   IK   V + FV
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL-EALRFGLQVHGSMIKTGLVLNVFV 513

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            ++LID+Y + G    A  +F +    ++  WN+MI  Y  +N    +++LF+ M + G 
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI 573

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             D ++I + + A      L +GK +H Y ++ G   D  + + ++DMYVKCG    A++
Sbjct: 574 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 633

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           IF  +     + W  MI G   +G+   ALS++ +M+ +G  PD+ TF  L+ A +    
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693

Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAM 665
           +E+G+ I    +K D   +P +    ++VD+  + G +E+AY   K M +  ++ +W  +
Sbjct: 694 VEEGKNIF-EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCL 752

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           L     H N E  L +    K   +EP+   T++ +++     GL +EA +   LM+EK
Sbjct: 753 LSASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 184/370 (49%), Gaps = 17/370 (4%)

Query: 354 IHGTTLKSGFYSAVIVGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           I   ++ SG  + +  G  L  +++YSK        T  FT  S+L+A S+L   L   K
Sbjct: 22  ISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTN-LSYGK 80

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF----ENKDGF---DLATWNAMI 464
            IH   +      D F++T+L+++Y + G +  A  +F    +++ G    D+  WN+MI
Sbjct: 81  TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140

Query: 465 FGYILSNNSHKALELFSHMHTSGERLD--EITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
            GY       + +  F  M   G R D   ++I  +V         ++GKQ+H + +++ 
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIY 581
            + D  + + ++DMY K G  +DA  +F +I    +V  W  MI G   +G  + +L +Y
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260

Query: 582 HQMRLSGV--VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
              + + V  V   FT A+   + S  +    GRQIH +++K+   +DP+V  SL+ MY+
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGF--GRQIHCDVVKMGLHNDPYVCTSLLSMYS 318

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCG + +A  +F  +  +   +WNAM+   A++  G   L LF  M+   V PDS T   
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378

Query: 700 VLSACSYTGL 709
           V+S CS  GL
Sbjct: 379 VISCCSVLGL 388



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 13/196 (6%)

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVP---DEFTFAILVKASSCLTALEQGRQIHANLIK 621
           I   +  GE   AL +Y +    G  P     FTF  L+KA S LT L  G+ IH +++ 
Sbjct: 31  IRALIQKGEYLQALHLYSKH--DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILF-------KQMDMRNTVLWNAMLVGLAQHGN 674
           L    DPF+  SLV+MY KCG ++ A  +F         +  R+  +WN+M+ G  +   
Sbjct: 89  LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSA-CSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
            +E +  F  M   GV PD+ +   V+S  C       E  +  H    +  ++ +    
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208

Query: 734 SFLVDALGRAGRTKEA 749
           + L+D   + G + +A
Sbjct: 209 TALIDMYFKFGLSIDA 224



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 30  NLPSFSLSLLPF-LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           NLP  S+ L    L +  F  S S +   S+L    ST+ LL GKS H   L      D 
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSIT---SVLVAISSTASLLKGKSLHGYTLRLGIPSDT 612

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            L N L+ MY +CG   YA  +F KM  + LI+WN ++  Y   G+           LF 
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGD-----CITALSLFD 667

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-IGLVWDEFVSGALVNIYSKF 207
            ++++      +T   L+  C  SG+V   + +  +  +  G+  +      +V++  + 
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727

Query: 208 GKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           G + EA      M  E D  +W  +L A
Sbjct: 728 GLLEEAYSFIKAMPIEADSSIWLCLLSA 755


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 226/712 (31%), Positives = 342/712 (48%), Gaps = 95/712 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           +N  +  Y   G  H AI+ + +M+   V  +  TF   L A +   +L  G+ IH    
Sbjct: 67  YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126

Query: 360 KSGFYSAVIVGNSLINMY---SKMGCVC-------------------------------- 384
             G ++ + V  +LI++Y   ++ G                                   
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186

Query: 385 ---------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK---NDTVADSFVSTAL 432
                    GLR +  TL S+L   +     L     +H + ++   +       + TAL
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLLPLLAQ-HGALFQGTSVHAYCLRAYLDQNEEQVLIGTAL 245

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           +D+Y +   +  A  +F      +  TW+A+I G++L +   +A  LF  M   G   L 
Sbjct: 246 LDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLS 305

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             ++A+A++ C  L  L+ G Q+HA   KSG   DL   + +L MY K G + +A  +F+
Sbjct: 306 ATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFD 365

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           +I   D +++  ++SG V NG+ + A  ++ +M+   V PD  T   L+ A S L AL+ 
Sbjct: 366 EIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQH 425

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           GR  H ++I    + +  +  SL+DMYAKCG I+ +  +F +M  R+ V WN M+ G   
Sbjct: 426 GRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGI 485

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G+E   LF  MK  G EPD VTFI +++ACS++GLV+E    F  M  KYGI P +E
Sbjct: 486 HGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 545

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY  +VD L R G   EA + I SMP +A   +  ALLGACR+  + + GK V+  +  L
Sbjct: 546 HYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKL 605

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            P  +  +VLLSNIF+AA ++D+    R   K K  KK P                    
Sbjct: 606 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQS 665

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              +  I+ +++ ++  IK+ GY  DT FVL D+EEEEKE+AL YHSEKLA A+G++S  
Sbjct: 666 HPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLN 725

Query: 889 PSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
               I   K                           ANRFHH ++G C C D
Sbjct: 726 EDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGD 777



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 237/570 (41%), Gaps = 93/570 (16%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G L  AR++FD++P  D  ++N+++ AY+  G  +A        L+RS+       ++ T
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHA-----AIDLYRSMLYFRVPPNKYT 101

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
              +LK C +   + A  T+H +A  +GL  D FVS AL+++Y +  +   A  +F  M 
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP 161

Query: 222 ERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----- 275
            RDVV W  ML  YA +G +   + HL     R GL P+  ++  +L +++  G      
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGT 221

Query: 276 ------------RHEEQV---------------QAYAIKLLLYNNNSNVVLWNKKLSGYL 308
                       ++EEQV                 YA ++       N V W+  + G++
Sbjct: 222 SVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV 281

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLV-ALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
                  A   F +M+   + + S T +  AL   A   +L +G Q+H    KSG ++ +
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341

Query: 368 IVGNSLINMYSKMGCV-------------------------------------------C 384
             GNSL++MY+K G +                                           C
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            ++ D  T+ S++ A S L   L   +  H   I      ++ +  +LID+Y + G +  
Sbjct: 402 NVQPDIATMVSLIPACSHL-AALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDL 460

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           +  +F+     D+ +WN MI GY +     +A  LF  M   G   D++T    + AC  
Sbjct: 461 SRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSH 520

Query: 505 LLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
             ++ +GK       H Y +    E  +C    ++D+  + G + +A      +P   DV
Sbjct: 521 SGLVTEGKHWFDTMTHKYGILPRMEHYIC----MVDLLARGGFLDEAYQFIQSMPLKADV 576

Query: 560 -AWTTMISGCVDNGEEDLALSIYHQMRLSG 588
             W  ++  C  +   DL   +   ++  G
Sbjct: 577 RVWGALLGACRIHKNIDLGKQVSRMIQKLG 606



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 7/356 (1%)

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           G +A A  +F+     D   +NA+I  Y      H A++L+  M       ++ T    +
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           KAC  L  L  G+ +HA+A   G   DL VS+ ++D+Y++C     A ++F  +P  D V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           AW  M++G  ++G    A++    M+   G+ P+  T   L+   +   AL QG  +HA 
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 619 LIK--LDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
            ++  LD + +   +G +L+DMYAKC ++  A  +F  M +RN V W+A++ G       
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 676 EETLKLFEDMKAHGVEPDSVTFIG-VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            E   LF+DM   G+   S T +   L  C+    +    +  H +  K GI  ++   +
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ-LHALLAKSGIHADLTAGN 345

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
            L+    +AG   EA  L   +  + + S + ALL      G  E    V +K+ A
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALLSGYVQNGKAEEAFLVFKKMQA 400



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S++   S LR   S +DL +G   HA +  S    D    N+L++MY++ G +  A  LF
Sbjct: 305 SATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLF 364

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D++  +D IS+ ++L+ Y  +G+       E F +F+ ++         T+  L+  C  
Sbjct: 365 DEIAIKDTISYGALLSGYVQNGKAE-----EAFLVFKKMQACNVQPDIATMVSLIPACSH 419

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +      HG  +  GL  +  +  +L+++Y+K G+I  ++ +FD M  RD+V W  M
Sbjct: 420 LAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTM 479

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF+ +   G  PDD +  C++   S  G
Sbjct: 480 IAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSG 522



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           L+ ++  G +  A+ +F+ IPAPD  A+  +I      G    A+ +Y  M    V P++
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           +TF  ++KA S L  L  GR IHA+   +   +D FV  +L+D+Y +C     A  +F +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTG 708
           M MR+ V WNAML G A HG     +    DM+   G+ P++ T + +L   +  G
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHG 215


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 186/587 (31%), Positives = 314/587 (53%), Gaps = 63/587 (10%)

Query: 392 TLASVLRASSSLPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVYCR-----------N 439
           +L   L++ ++L  GL  L   +H  A+++   AD F + AL+++YC+           +
Sbjct: 60  SLPGALKSCAAL--GLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMD 117

Query: 440 GS---MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
           GS   +     +F+     D+ +WN ++ G   S    +AL L   M   G + D  T++
Sbjct: 118 GSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLS 177

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + +        +++G ++H +A ++GF  D+ V S ++DMY  C     +  +F+++P  
Sbjct: 178 SVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 237

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D + W +M++GC  NG  D AL ++ +M  SG+ P   TF+ L+ A   L +L  G+Q+H
Sbjct: 238 DAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLH 297

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A +I+     + F+  SL+DMY KCGN+  A  +F ++   + V W AM++G A HG   
Sbjct: 298 AYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAR 357

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E L LF+ M+   ++P+ +TF+ VL+ACS+ GLV + ++ F+ M + YGI P +EH++ L
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
            D LGR G+ +EA   I  M  + +AS+   LL AC+V  +T   + VA+K+  LEP   
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSM 477

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
            ++++LSN ++++ +W++    R  M++K ++K+PA                       +
Sbjct: 478 GSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYE 537

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I   +    +++   GYVP+TD V  D+EEE+K   L  HSEKLA  +G+ISTPP + I
Sbjct: 538 RIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTI 597

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                +  +E +   ANRFHH +DG+C C D
Sbjct: 598 RVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGD 644



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 48/316 (15%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRC-----------GSLVY---ARRLFDKMPD 116
           LG S HA  L S    DRF  N L+ +Y +            GS V     R++FD+MP+
Sbjct: 76  LGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPE 135

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +D++SWN+++   A SG        E   L R +          TL+ +L +      V 
Sbjct: 136 KDVVSWNTLVLGCAESGRHG-----EALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVR 190

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               +HG+A + G   D FV  +L+++Y+   +   +  +FD +  RD +LW  ML   A
Sbjct: 191 RGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCA 250

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------- 287
           +NG  +E   LF  +  SG+ P   +   ++    +L      +Q+ AY I+        
Sbjct: 251 QNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVF 310

Query: 288 -----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                + +Y    NV               V W   + G+   G    A+  F  M   N
Sbjct: 311 ISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGN 370

Query: 328 VQYDSVTFLVALAAVA 343
           ++ + +TFL  L A +
Sbjct: 371 LKPNHITFLAVLTACS 386



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 5/208 (2%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +D+  G   H     +    D F+ ++L+ MY+ C    Y+ ++FD +P RD I WNS+L
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSML 246

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A  A +G     +V E   LFR +  S      +T + L+  C +   +   + +H Y +
Sbjct: 247 AGCAQNG-----SVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVI 301

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + G   + F+S +L+++Y K G +  A+ +FD +Q  D+V W  M+  +A +G   E   
Sbjct: 302 RGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV 361

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG 274
           LF  +    L P+  +   VL   S  G
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAG 389



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 44/296 (14%)

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGYVWASETVHGYALKIGL 190
           + +G+  +    F   R+   +   +S LT  P  LK C + G      ++H  AL+ G 
Sbjct: 30  ASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGA 89

Query: 191 VWDEFVSGALVNIYSKFGK--------------IREAKFLFDGMQERDVVLWKVMLRAYA 236
             D F + AL+N+Y K                 +   + +FD M E+DVV W  ++   A
Sbjct: 90  FADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCA 149

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------- 287
           E+G   E   L  ++ R G  PD  ++  VL + ++    R   ++  +A +        
Sbjct: 150 ESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVF 209

Query: 288 -----LLLYNNNS---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                + +Y N +               + +LWN  L+G  Q G    A+  F  M+ S 
Sbjct: 210 VGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSG 269

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           ++   VTF   + A     +L LG+Q+H   ++ GF   V + +SLI+MY K G V
Sbjct: 270 IKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNV 325


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 203/640 (31%), Positives = 330/640 (51%), Gaps = 78/640 (12%)

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           + V+   +T    + A +   +  LG+Q+H   ++ GF +     + L++MY+KMG +  
Sbjct: 143 ARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGD 202

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
                                   +K++    +  + V  + + T L+    R   + EA
Sbjct: 203 ------------------------AKRVFDEMVVKNVVMYNTMITGLL----RCKMVEEA 234

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +FE     D  TW  M+ G   +    +AL++F  M   G  +D+ T  + + ACG L
Sbjct: 235 RGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGAL 294

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
              ++GKQ+HAY +++ ++ ++ V S ++DMY KC ++  A+++F  +   + ++WT MI
Sbjct: 295 AASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMI 354

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   NG  + A+ ++ +M+  G+ P++FT   ++ + + L +LE+G Q H   + L   
Sbjct: 355 VGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHC--MALVSG 412

Query: 626 SDPFVGIS--LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             P++ +S  LV +Y KCG+IEDA+ LF +M   + V + A++ G AQ G  +ET+ LFE
Sbjct: 413 LRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFE 472

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M   GV+P+ VTFIGVLSACS +GLV +    FH M++ +GI    +HY+ ++D   R+
Sbjct: 473 KMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRS 532

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           GR KEA E I  MP    A     LL ACR++GD E GKW AE L+  +P + ++YVLL 
Sbjct: 533 GRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLC 592

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           ++ A+  +W +V   R  M+ + VKK+P                       +  I+ K++
Sbjct: 593 SMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQ 652

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI---- 893
            L  ++ E GY PD   VL DV + EK   L  HSEKLA A+GLI  P   P  V+    
Sbjct: 653 WLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLR 712

Query: 894 --------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                         ++ ++ L   A RFH   +G+C C D
Sbjct: 713 VCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGD 752



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 49/341 (14%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           R+ +   + +  + N ++T   RC  +  AR +F+ M DRD I+W +++     +G    
Sbjct: 205 RVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQ-- 262

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
              +E   +FR +R       + T   +L  C +       + +H Y ++     + FV 
Sbjct: 263 ---SEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVG 319

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            ALV++YSK   IR A+ +F  M  ++++ W  M+  Y +NG GEE   +F ++   G+ 
Sbjct: 320 SALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIK 379

Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIKLL---------------LYNNNSNV----- 297
           P+D ++  V+   ++L    EE  Q + + L+               LY    ++     
Sbjct: 380 PNDFTLGSVISSCANLASL-EEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHR 438

Query: 298 ----------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                     V +   +SGY Q G     I+ F  M+   V+ + VTF+  L+A + +  
Sbjct: 439 LFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGL 498

Query: 348 LNLG-------QQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           +  G       QQ HG  L    Y+       +I++YS+ G
Sbjct: 499 VEKGCSYFHSMQQDHGIVLLDDHYTC------MIDLYSRSG 533



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 124/610 (20%), Positives = 217/610 (35%), Gaps = 175/610 (28%)

Query: 74  STHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD---------------- 116
           + H  +L +    P  ++ N+L+T Y+R G L  ARRLFD MPD                
Sbjct: 30  AVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHA 89

Query: 117 ---------------RDLISWNSILAAYAHSGEG-----------NAENVTEGFRLFRSL 150
                          RD +S+N+++A ++ +G               E V +G R+    
Sbjct: 90  RLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARV---- 145

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                  SR+T++ ++    + G       VH   +++G     F    LV++Y+K G I
Sbjct: 146 -----RPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLI 200

Query: 211 REAKFLFD-------------------------------GMQERDVVLWKVMLRAYAENG 239
            +AK +FD                                M +RD + W  M+    +NG
Sbjct: 201 GDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNG 260

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN---- 294
              E   +F  +   G+  D  +   +L     L    E +Q+ AY I+  LY+ N    
Sbjct: 261 LQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIR-TLYDGNIFVG 319

Query: 295 -------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     N++ W   + GY Q G    A+  F  M    ++
Sbjct: 320 SALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIK 379

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            +  T    +++ A   +L  G Q H   L SG    + V ++L+ +Y K G        
Sbjct: 380 PNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG-------- 431

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                       S+ +   L  ++  H        D    TAL+  Y + G   E     
Sbjct: 432 ------------SIEDAHRLFDEMPFH--------DQVSYTALVSGYAQFGKAKE----- 466

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                                      ++LF  M   G + + +T    + AC    +++
Sbjct: 467 --------------------------TIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVE 500

Query: 510 QG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISG 567
           +G    H+     G  L     + ++D+Y + G + +A+     +P  PD + W T++S 
Sbjct: 501 KGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560

Query: 568 CVDNGEEDLA 577
           C   G+ ++ 
Sbjct: 561 CRLRGDMEIG 570



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA  + +    + F+ + L+ MYS+C S+  A  +F +M  +++ISW +++  Y  
Sbjct: 300 GKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQ 359

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G G      E  R+F  ++      +  TL  ++  C +   +      H  AL  GL 
Sbjct: 360 NGCGE-----EAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLR 414

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               VS ALV +Y K G I +A  LFD M   D V +  ++  YA+ G  +E   LF  +
Sbjct: 415 PYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKM 474

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
              G+ P+  +   VL   S  G
Sbjct: 475 LLKGVKPNGVTFIGVLSACSRSG 497



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    + + L  G   H   L S   P   +++ L+T+Y +CGS+  A RLFD+MP  
Sbjct: 387 SVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH 446

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
           D +S+ ++++ YA  G+       E   LF  +       + +T   +L  C  SG V  
Sbjct: 447 DQVSYTALVSGYAQFGKAK-----ETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEK 501

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRA 234
                H      G+V  +     ++++YS+ G+++EA+     M    D + W  +L A
Sbjct: 502 GCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 316/601 (52%), Gaps = 51/601 (8%)

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP-EGLHLSKQIHVHAIKNDT 422
           Y+   + ++ I MY  M  +  +  + FT   VL+A      EG+   KQIH    K   
Sbjct: 60  YTQKNIVDAPIRMYMDMQ-ISQVHPNCFTFLYVLKACGGTSVEGI--GKQIHGQTFKYGF 116

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
            ++ FV  +L+ +Y + G ++ A  +F+      + +W ++I GY+ + +  +AL +F  
Sbjct: 117 GSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKE 176

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M     + D I + + + A   +  L QGK +H    K G E +  +   +  MY K G 
Sbjct: 177 MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 236

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +  A+  FN +  P+ + W  MISG  +NG  + A+ ++ +M    +  D  T    V A
Sbjct: 237 VEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA 296

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
           S+ + +LE  R +   + K +   D FV   L+DMYAKCG+I  A  +F ++  ++ VLW
Sbjct: 297 SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLW 356

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           + M++G   HG+G+E + L+ +MK  GV P+  TFIG+L+AC  +GLV E +E FHLM +
Sbjct: 357 SVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD 416

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            +GIEP  +HYS +VD LGRAG   +A + I+SMP +   S+  ALL AC++      G+
Sbjct: 417 -HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGE 475

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD------------ 830
             AE+L  L+P+++  YV LSN++A+A+ W  V + R  M +K + KD            
Sbjct: 476 IAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNL 535

Query: 831 -----------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
                       +  IF +++ L KR+K  GYVP  + VL D+  EE E  L +HSE+LA
Sbjct: 536 ETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLA 595

Query: 880 RAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCA 916
            AYG+IST P + +                     L ++E +   A RFHH +DG+C C 
Sbjct: 596 VAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCG 655

Query: 917 D 917
           D
Sbjct: 656 D 656



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 197/433 (45%), Gaps = 45/433 (10%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA K     +  +++LWN  + GY Q       I  +++M  S V  +  TFL  L A  
Sbjct: 37  YAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG 96

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------- 383
           GT    +G+QIHG T K GF S V V NSL++MY+K G +                    
Sbjct: 97  GTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTS 156

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                  C ++ D   L SV+ A +++ E L   K IH    K 
Sbjct: 157 IISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV-EDLGQGKSIHGLVTKL 215

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               +  +  +L  +Y + G +  A + F   +  +L  WNAMI GY  +    +A++LF
Sbjct: 216 GLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLF 275

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M T   R+D IT+ +AV A   +  L+  + +  Y  KS +  D  V++G++DMY KC
Sbjct: 276 REMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKC 335

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G++  A+ +F+ +   D V W+ MI G   +G    A+ +Y++M+ +GV P++ TF  L+
Sbjct: 336 GSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLL 395

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A      +++G ++   +              +VD+  + G +  AY     M ++  V
Sbjct: 396 TACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGV 455

Query: 661 -LWNAMLVGLAQH 672
            +W A+L     H
Sbjct: 456 SVWGALLSACKIH 468



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 148/297 (49%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q++V  I +      F+    I+     G +  A   F      D+  WNA+I GY   N
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
                + ++  M  S    +  T    +KACG   +   GKQ+H    K GF  ++ V +
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY K G +  A+ +F+ +     V+WT++ISG V NG+   AL+++ +MR   V P
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D      ++ A + +  L QG+ IH  + KL    +P + ISL  MYAK G +E A   F
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +M+  N +LWNAM+ G A +G GEE +KLF +M    +  DS+T    + A +  G
Sbjct: 245 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 36/326 (11%)

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEG-FRL 146
           RFL    +      G + YA + F ++ + D++ WN+I+  Y        +N+ +   R+
Sbjct: 19  RFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQ------KNIVDAPIRM 72

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +  ++ S    +  T   +LK C  +      + +HG   K G   + FV  +LV++Y+K
Sbjct: 73  YMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAK 132

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           FG+I  A+ +FD + +R VV W  ++  Y +NG   E  ++F ++ +  + PD  ++  V
Sbjct: 133 FGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSV 192

Query: 267 L----------------GVISDLGKRHEEQV-----QAYAIKLLL------YNN--NSNV 297
           +                G+++ LG   E  +       YA + L+      +N     N+
Sbjct: 193 MTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNL 252

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           +LWN  +SGY   G    AI+ F  MI  N++ DS+T   A+ A A   +L L + + G 
Sbjct: 253 ILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGY 312

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV 383
             KS +     V   LI+MY+K G +
Sbjct: 313 ISKSEYRDDTFVNTGLIDMYAKCGSI 338



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 158/345 (45%), Gaps = 40/345 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+    TS   +GK  H +        + F+ N+L++MY++ G + YAR +FDK+ DR 
Sbjct: 91  VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT 150

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SW SI++ Y  +G+       E   +F+ +R+       + L  ++    +   +   
Sbjct: 151 VVSWTSIISGYVQNGDP-----MEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 205

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           +++HG   K+GL ++  +  +L  +Y+K G +  A+F F+ M++ +++LW  M+  YA N
Sbjct: 206 KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN 265

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQ 282
           G+GEE   LF ++    +  D  +++  +                G IS    R +  V 
Sbjct: 266 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 325

Query: 283 AYAIKLL-----------LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              I +            +++   + +VVLW+  + GY   G    AI  +  M ++ V 
Sbjct: 326 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 385

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQI------HGTTLKSGFYSAVI 368
            +  TF+  L A   +  +  G ++      HG       YS V+
Sbjct: 386 PNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVV 430



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/474 (21%), Positives = 187/474 (39%), Gaps = 84/474 (17%)

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
            F+    +N    FG +  A   F  + E D++LW  +++ Y +    +    +++D+  
Sbjct: 19  RFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQI 78

Query: 254 SGLCPDDESVQCVLGV-----ISDLGKRHEEQVQAYAIKLLLYNNNS------------- 295
           S + P+  +   VL       +  +GK+   Q   Y     ++  NS             
Sbjct: 79  SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISY 138

Query: 296 -----------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                       VV W   +SGY+Q GD   A+  F  M + NV+ D +  +  + A   
Sbjct: 139 ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTN 198

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
            ++L  G+ IHG   K G      +  SL  MY+K G V                     
Sbjct: 199 VEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAM 258

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                   +R D  T+ S + AS+ +   L L++ +  +  K++
Sbjct: 259 ISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGS-LELARWLDGYISKSE 317

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D+FV+T LID+Y + GS+  A  +F+     D+  W+ MI GY L  +  +A+ L++
Sbjct: 318 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 377

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M  +G   ++ T    + AC    ++K+G ++       G E      S ++D+  + G
Sbjct: 378 EMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAG 437

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            +  A      +P  P    W  ++S C           I+ ++RL  +  ++ 
Sbjct: 438 YLNQAYDFIMSMPIKPGVSVWGALLSAC----------KIHRKVRLGEIAAEQL 481



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 15/208 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARI--LNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           S++    +  DL  GKS H  +  L     PD  ++  L TMY++ G +  AR  F++M 
Sbjct: 191 SVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS--LTTMYAKRGLVEVARFFFNRME 248

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
             +LI WN++++ YA++G G      E  +LFR   E IT   R+    +    L+S  V
Sbjct: 249 KPNLILWNAMISGYANNGYGE-----EAIKLFR---EMITKNIRVDSITMRSAVLASAQV 300

Query: 176 WASETVH---GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            + E      GY  K     D FV+  L+++Y+K G I  A+ +FD + ++DVVLW VM+
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDD 260
             Y  +G G+E   L+ ++ ++G+CP+D
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPND 388



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 1/136 (0%)

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q++  LI        F+ I  ++     G++  A+  F+++   + +LWNA++ G  Q  
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +  ++++ DM+   V P+  TF+ VL AC  T  V    +  H    KYG    V   
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTS-VEGIGKQIHGQTFKYGFGSNVFVQ 123

Query: 734 SFLVDALGRAGRTKEA 749
           + LV    + G+   A
Sbjct: 124 NSLVSMYAKFGQISYA 139


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 309/585 (52%), Gaps = 46/585 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLG 351
           N  ++ LWN  ++   +       +E F  ++    ++ D+ T+   L A +G   +  G
Sbjct: 258 NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 317

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------------MGC---- 382
           + +H   +KSGF   V+V +S + MY+K                         + C    
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 377

Query: 383 --------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                         V G + D  TL +V+ + + L + L   K+IH+  +++    D FV
Sbjct: 378 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD-LERGKEIHMELVRSGFALDGFV 436

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S+AL+D+Y + G +  A+ +FE     ++ +WN+MI GY L  +S   +ELF  M   G 
Sbjct: 437 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 496

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           R    T+++ + AC   + L+ GK +H Y +++  E D+ V+S ++D+Y KCG +  A++
Sbjct: 497 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 556

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F ++P  + V+W  MISG V  G    AL I+  MR +GV PD  TF  ++ A S L  
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 616

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE+G++IH  +I+     +  V  +L+DMYAKCG +++A  +F Q+  R+ V W +M+  
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG   E LKLFE M+    +PD VTF+ +LSACS+ GLV E    F+ M  +YG +P
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEK 787
            VEHYS L+D LGR GR +EA E++   P       +   L  AC +    + G+ +   
Sbjct: 737 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 796

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L+  +P D S Y++LSN++A+  +WD+V   R ++K   +KK+P 
Sbjct: 797 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPG 841



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 160/640 (25%), Positives = 265/640 (41%), Gaps = 92/640 (14%)

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLISWNSILAA 128
           LLGK  H +I++     +  L  +L+ +Y  C     A+ +F  + +  D+  WN ++AA
Sbjct: 212 LLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAA 271

Query: 129 YAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
              +         EG  +F R L          T   +LK C   G V   + VH + +K
Sbjct: 272 CTKNF-----IFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIK 326

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   D  V  + V +Y+K     +A  LFD M ERDV  W  ++  Y ++G  E+   L
Sbjct: 327 SGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALEL 386

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA------------------ 283
           F ++  SG  PD  ++  V+   + L     GK  H E V++                  
Sbjct: 387 FEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGK 446

Query: 284 -----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                 A ++       NVV WN  ++GY   GD+   IE F  M    ++    T    
Sbjct: 447 CGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSI 506

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
           L A + + NL LG+ IHG  +++   + + V +SLI++Y K G +               
Sbjct: 507 LMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNV 566

Query: 384 ----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G++ D  T  SVL A S L   L   K+IH 
Sbjct: 567 VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV-LEKGKEIHN 625

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             I++    +  V  AL+D+Y + G++ EA ++F      D  +W +MI  Y     + +
Sbjct: 626 FIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFE 685

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-YAMKSGFELDLCVS 530
           AL+LF  M  S  + D++T    + AC    ++ +G     QM A Y  K   E   C  
Sbjct: 686 ALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSC-- 743

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSG 588
             ++D+  + G + +A  I    P   +DV   +T+ S C  + + DL   I  ++ +  
Sbjct: 744 --LIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQI-GRLLIEK 800

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
              D  T+ IL    + +   ++ R++   + +L    +P
Sbjct: 801 DPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNP 840



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 37/380 (9%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P  +L L   ++ S F   S +    +++       DL  GK  H  ++ S    D F++
Sbjct: 380 PEKALELFEEMKVSGFKPDSVTLT--TVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           + L+ MY +CG L  A+ +F+++  ++++SWNS++A Y+  G+  +        LFR + 
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS-----CIELFRRMD 492

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E     +  TL+ +L  C  S  +   + +HGY ++  +  D FV+ +L+++Y K G I 
Sbjct: 493 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 552

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A+ +F  M + +VV W VM+  Y + G   E   +F D+ ++G+ PD  +   VL   S
Sbjct: 553 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 612

Query: 272 DLGKRHE-EQVQAYAIK--------------------------LLLYNN--NSNVVLWNK 302
            L    + +++  + I+                          L ++N     + V W  
Sbjct: 613 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTS 672

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS- 361
            ++ Y   G    A++ F  M +S+ + D VTFL  L+A +    ++ G       +   
Sbjct: 673 MIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY 732

Query: 362 GFYSAVIVGNSLINMYSKMG 381
           GF  AV   + LI++  ++G
Sbjct: 733 GFKPAVEHYSCLIDLLGRVG 752


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 212/667 (31%), Positives = 337/667 (50%), Gaps = 76/667 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV LWN  +S Y ++GD   +I  F  M+   ++          +A    D L     I 
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE-----SASELFDKLCDRDVIS 218

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             ++ SG+ S  +    L  +Y +M  + G+  D  T+ SVL   ++    L L K +H 
Sbjct: 219 WNSMISGYVSNGLTERGL-GIYKQMMYL-GIDVDLATIISVLVGCAN-SGTLSLGKAVHS 275

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
            AIK+        S  L+D+Y + G +  A  +FE     ++ +W +MI GY     S  
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 335

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A+ L   M   G +LD + I + + AC     L  GK +H Y   +    +L V + ++D
Sbjct: 336 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMD 395

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG+M  A S+F+ +   D ++W TM+      GE               + PD  T
Sbjct: 396 MYAKCGSMEGANSVFSTMVVKDIISWNTMV------GE---------------LKPDSRT 434

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A ++ A + L+ALE+G++IH  +++   SSD  V  +LVD+Y KCG +  A +LF  + 
Sbjct: 435 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V W  M+ G   HG G E +  F +M+  G+EPD V+FI +L ACS++GL+ + + 
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F++M+  + IEP++EHY+ +VD L R G   +A + I ++P    A++  ALL  CR+ 
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            D E  + VAE++  LEP ++  YVLL+NI+A A + ++V   R ++ +K ++K+P    
Sbjct: 615 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSW 674

Query: 833 -------DLIFA----------KVEGLIK----RIKEGGYVPDTDFVLLDVEEEEKERAL 871
                  +L  +          K+E L+K    ++KE GY P T + L++ +E +KE AL
Sbjct: 675 IEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMAL 734

Query: 872 YYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHL 908
             HSEKLA A+GL++ PP   I   K                           +NRFHH 
Sbjct: 735 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 794

Query: 909 RDGMCPC 915
           +DG C C
Sbjct: 795 KDGYCSC 801



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 281/611 (45%), Gaps = 95/611 (15%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   +L+LC     +   + VH       +  DE +   LV+ Y+  G ++E + +FD M
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           ++++V LW  M+  YA+ G  +E   LF  +   G+                 GKR E  
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI----------------EGKRPESA 204

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
            + +  KL     + +V+ WN  +SGY+  G     +  +  M+   +  D  T +  L 
Sbjct: 205 SELFD-KLC----DRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------- 381
             A +  L+LG+ +H   +KS F   +   N+L++MYSK G                   
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319

Query: 382 ---CVCGLRTDQFTLASVLRASSSLPEGLHL--------------------SKQIHVHAI 418
               + G   D ++  +++       EG+ L                     K +H +  
Sbjct: 320 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
            N+  ++ FV  AL+D+Y + GSM  A  +F      D+ +WN M+              
Sbjct: 380 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-------------- 425

Query: 479 LFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
                   GE + D  T+A  + AC  L  L++GK++H Y +++G+  D  V++ ++D+Y
Sbjct: 426 --------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           VKCG +  A+ +F+ IP+ D V+WT MI+G   +G  + A++ +++MR +G+ PDE +F 
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 537

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A S    LEQG +    ++K D + +P +     +VD+ ++ GN+  AY   + + 
Sbjct: 538 SILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLP 596

Query: 656 MR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
           +  +  +W A+L G   + + E   K+ E  +   +EP++  +  VL A  Y    +E  
Sbjct: 597 IAPDATIWGALLCGCRIYHDIELAEKVAE--RVFELEPENTGYY-VLLANIYAE--AEKR 651

Query: 715 ENFHLMREKYG 725
           E    MREK G
Sbjct: 652 EEVKRMREKIG 662



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 244/629 (38%), Gaps = 157/629 (24%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ L+   QKS   + +    + S+L+       L  GK  H+ I ++S   D  L   L
Sbjct: 85  AMELVCMCQKSELETKT----YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKL 140

Query: 95  MTMYSRCGSLVYARR--------------------------------------------- 109
           ++ Y+ CG L   RR                                             
Sbjct: 141 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 110 ------LFDKMPDRDLISWNSILAAYAHSGEGNAENVTE-GFRLFRSLRESITFTSRLTL 162
                 LFDK+ DRD+ISWNS+++ Y  +G      +TE G  +++ +          T+
Sbjct: 201 PESASELFDKLCDRDVISWNSMISGYVSNG------LTERGLGIYKQMMYLGIDVDLATI 254

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             +L  C +SG +   + VH  A+K         S  L+++YSK G +  A  +F+ M E
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 314

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRH 277
           R+VV W  M+  Y  +G+ +    L   + + G+  D  ++  +L   +     D GK  
Sbjct: 315 RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 374

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV--------- 328
            + ++A        N  SN+ + N  +  Y + G   GA   F  M+  ++         
Sbjct: 375 HDYIKA-------NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE 427

Query: 329 -QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
            + DS T    L A A    L  G++IHG  L++G+ S   V N+L+++Y K G V GL 
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG-VLGLA 486

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
              F +         +P                    D    T +I  Y  +G   EA  
Sbjct: 487 RLLFDM---------IPS------------------KDLVSWTVMIAGYGMHGYGNEA-- 517

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                    +AT+N                     M  +G   DE++  + + AC    +
Sbjct: 518 ---------IATFN--------------------EMRDAGIEPDEVSFISILYACSHSGL 548

Query: 508 LKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTM 564
           L+QG +   Y MK+ F ++  +   + ++D+  + G +  A      +P APD   W  +
Sbjct: 549 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 607

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           + GC           IYH + L+  V + 
Sbjct: 608 LCGC----------RIYHDIELAEKVAER 626



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 53/300 (17%)

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           +NA I  +    +   A+EL      S   L+  T  + ++ C  L  L  GK++H+   
Sbjct: 69  YNAKILHFCQLGDLENAMELVCMCQKS--ELETKTYGSVLQLCAGLKSLTDGKKVHSIIK 126

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP----------------------- 556
            +   +D  +   ++  Y  CG + + + +F+ +                          
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 557 ----------------------------DDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                                       D ++W +MISG V NG  +  L IY QM   G
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           +  D  T   ++   +    L  G+ +H+  IK           +L+DMY+KCG+++ A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M  RN V W +M+ G  + G  +  + L + M+  GV+ D V    +L AC+ +G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 19/228 (8%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL    S S L  GK  H  IL +    DR + N L+ +Y +CG L  AR LFD +P +D
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           L+SW  ++A Y   G GN     E    F  +R++      ++   +L  C  SG +   
Sbjct: 498 LVSWTVMIAGYGMHGYGN-----EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML-- 232
           W    +      I    + +    +V++ S+ G + +A KF+       D  +W  +L  
Sbjct: 553 WRFFYIMKNDFNIEPKLEHY--ACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610

Query: 233 -RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
            R Y +    E+V     +L      P++     +L  I    ++ EE
Sbjct: 611 CRIYHDIELAEKVAERVFELE-----PENTGYYVLLANIYAEAEKREE 653


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 207/583 (35%), Positives = 303/583 (51%), Gaps = 62/583 (10%)

Query: 385 GLRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           GL+ D  T   V++A   SS    GL     +H H +K+    DS++ ++LI +Y     
Sbjct: 190 GLKPDHMTYPFVIKACNESSVTWFGL----LVHTHVVKSGFECDSYIVSSLIHLYANGKD 245

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +  A+ LF      D+ +WNAMI GY+       A  +F  M       D I+  T +  
Sbjct: 246 LGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR----DVISWNTMING 301

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
              +  + + K++         E +L   + +L  +VKCG + DA  +F+++P  D V+W
Sbjct: 302 YAIVGKIDEAKRL----FDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSW 357

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            +M++     G+ + AL+++ QMR  GV P E T   L+ A + L AL++G  +H  +  
Sbjct: 358 NSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIND 417

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                +  VG +LVDMYAKCG I  A  +F  M+ ++ + WN ++ G+A HGN +E  +L
Sbjct: 418 NRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQL 477

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F++MK  GVEP+ +TF+ +LSACS+ G+V E  +    M   YGIEP+VEHY  ++D L 
Sbjct: 478 FKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLA 537

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG  +EA ELI +MP E + S   ALLG CR+ G+ E G+ V ++L+ L+P  S  Y+L
Sbjct: 538 RAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYIL 597

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI+AAA +WDD    R  MK   + K P                       ++ I+ K
Sbjct: 598 LSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEK 657

Query: 839 VEGLIKRIKEG-GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK 897
           +  +  R+K   GY  DT  VLLD+EEE+KE AL  HSEKLA AYGL+       I   K
Sbjct: 658 LNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVK 717

Query: 898 E---------------PLYA--------NRFHHLRDGMCPCAD 917
                            +Y         NRFHH  DG C C D
Sbjct: 718 NLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLD 760



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 211/486 (43%), Gaps = 65/486 (13%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA+ +F  + +     +NS++ A + S     +   E   L+ ++ +S      +T  
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSS-----KTPLEALPLYHTMLQSGLKPDHMTYP 199

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            ++K C  S   W    VH + +K G   D ++  +L+++Y+    +  AK LF+    R
Sbjct: 200 FVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR 259

Query: 224 DVVLWKVMLRAY---AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           DVV W  M+  Y    E G    VF   V       C D  S   ++   + +GK  E  
Sbjct: 260 DVVSWNAMIDGYVKHVEMGHARMVFDRMV-------CRDVISWNTMINGYAIVGKIDE-- 310

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVAL 339
               A +L       N+V WN  L+G+++ G+   A   F  M  R  V ++S   ++A 
Sbjct: 311 ----AKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNS---MLAC 363

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
            A  G  N  L                         ++ +M  V G++  + T+ S+L A
Sbjct: 364 YAQCGKPNEALA------------------------LFDQMRAV-GVKPTEATVVSLLSA 398

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTV--ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            + L     L K +H+H   ND     +S V TAL+D+Y + G ++ A  +F   +  D+
Sbjct: 399 CAHLGA---LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 455

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM--- 514
             WN +I G  +  N  +A +LF  M  +G   ++IT    + AC    M+ +G+++   
Sbjct: 456 LAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDC 515

Query: 515 --HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDN 571
              +Y ++   E   CV    +D+  + G + +A  +   +P  P+  A   ++ GC  +
Sbjct: 516 MSSSYGIEPKVEHYGCV----IDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIH 571

Query: 572 GEEDLA 577
           G  +L 
Sbjct: 572 GNFELG 577



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 178/364 (48%), Gaps = 12/364 (3%)

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +A A+ +F +      + +N++I     S    +AL L+  M  SG + D +T    +KA
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C    +   G  +H + +KSGFE D  + S ++ +Y     +  A+ +FN   A D V+W
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             MI G V + E   A  ++ +M    V  D  ++  ++   + +  +++ +++   + +
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPE 320

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
            +  S      S++  + KCGN+EDA+ LF +M  R+ V WN+ML   AQ G   E L L
Sbjct: 321 RNLVS----WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 376

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F+ M+A GV+P   T + +LSAC++ G + +   + H       IE      + LVD   
Sbjct: 377 FDQMRAVGVKPTEATVVSLLSACAHLGALDKGL-HLHTYINDNRIEVNSIVGTALVDMYA 435

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL--MALEPFDSSAY 799
           + G+   A ++  +M  +   + +  + G   + G+ +  + + +++    +EP D +  
Sbjct: 436 KCGKISLATQVFNAMESKDVLAWNTIIAGMA-IHGNVKEAQQLFKEMKEAGVEPNDITFV 494

Query: 800 VLLS 803
            +LS
Sbjct: 495 AILS 498



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 8/213 (3%)

Query: 70  LLGKSTHARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++GK   A+ L   ++P+R L   N+++  + +CG++  A  LF +MP RD++SWNS+LA
Sbjct: 304 IVGKIDEAKRL-FDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLA 362

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            YA  G+ N     E   LF  +R      +  T+  LL  C   G +     +H Y   
Sbjct: 363 CYAQCGKPN-----EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIND 417

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             +  +  V  ALV++Y+K GKI  A  +F+ M+ +DV+ W  ++   A +G  +E   L
Sbjct: 418 NRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQL 477

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           F ++  +G+ P+D +   +L   S  G   E Q
Sbjct: 478 FKEMKEAGVEPNDITFVAILSACSHAGMVDEGQ 510



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 168/405 (41%), Gaps = 93/405 (22%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILR 61
           +T LQ+ LKP H             TY           PF+ K+    + SS  WF +L 
Sbjct: 184 HTMLQSGLKPDHM------------TY-----------PFVIKA---CNESSVTWFGLL- 216

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
                         H  ++ S    D ++ ++L+ +Y+    L  A++LF+    RD++S
Sbjct: 217 -------------VHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVS 263

Query: 122 WNSILAAYA-HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           WN+++  Y  H   G+A  V +  R+    R+ I++ + +    ++      G +  ++ 
Sbjct: 264 WNAMIDGYVKHVEMGHARMVFD--RMV--CRDVISWNTMINGYAIV------GKIDEAKR 313

Query: 181 VHGYALKIGLV-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
           +     +  LV W+  ++G     + K G + +A  LF  M  RDVV W  ML  YA+ G
Sbjct: 314 LFDEMPERNLVSWNSMLAG-----FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCG 368

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG--------------KRHEEQ----- 280
              E   LF  +   G+ P + +V  +L   + LG               R E       
Sbjct: 369 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 428

Query: 281 --VQAYA------IKLLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
             V  YA      +   ++N   + +V+ WN  ++G    G+   A + F  M  + V+ 
Sbjct: 429 ALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP 488

Query: 331 DSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKSGFYSAVI 368
           + +TF+  L+A +    ++ GQ++       +G   K   Y  VI
Sbjct: 489 NDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVI 533


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 208/585 (35%), Positives = 297/585 (50%), Gaps = 58/585 (9%)

Query: 385 GLRTDQFTLASVLRA--SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           G   D F L   ++A    SL +G   +K  H  AIK     D +V+ AL++VY   GS+
Sbjct: 108 GKLVDSFNLVFAVKACFGLSLFQG---AKLFHSLAIKLRLEGDPYVAPALMNVYTELGSL 164

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            EA  +FE     +   W  MI G++  +      ELFS M  SG  LD   +   ++AC
Sbjct: 165 EEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQAC 224

Query: 503 GCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           G +   K+GK  H   +K  F + +  + + ++DMY+KCG +  A  +F +I   D V W
Sbjct: 225 GNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVW 284

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           + +I+G   NG    ++S++ QM    V P+  TFA +V A S L +L+QGR +H  +I+
Sbjct: 285 SAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIR 344

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                D     S +DMYAKCG I  AY +F Q+  +N   W+ M+ G   HG   E L L
Sbjct: 345 NGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNL 404

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F +M++    P+SVTF+ VLSACS++G + E + +F  M   YGI P  EHY+ +VD LG
Sbjct: 405 FYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLG 464

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG+  EA   I +MP E  AS   ALLGACR+    E  + VA+KL+ LE   S  YV+
Sbjct: 465 RAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVM 524

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVE--------------------- 840
           LSNI+A    W+ V   R +M  K + K      F  +E                     
Sbjct: 525 LSNIYADVGMWEMVKKTRLKMCEKGIHKIVG---FTSIEIEEKLYLFSSEDRFAYKNTQI 581

Query: 841 -----GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS--------- 886
                 L +R++E GYVPD  FVL DV++E K+  L  HSEKLA  +GL++         
Sbjct: 582 ESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRI 641

Query: 887 -----------TPPSSVILSNKEPLY---ANRFHHLRDGMCPCAD 917
                      T    + L  +  +      RFHH++DG+C C D
Sbjct: 642 TKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGD 686



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 192/372 (51%), Gaps = 6/372 (1%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R    TL S+ R + +L     L+ QI V+A+    +    +  A I +    GS+  A 
Sbjct: 12  RNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQL----GSLHVAS 67

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
             F +    +L +WN ++  +  +   +  L+LF  M   G+ +D   +  AVKAC  L 
Sbjct: 68  KAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLS 127

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           + +  K  H+ A+K   E D  V+  ++++Y + G++ +A  +F ++P  + V W  MI 
Sbjct: 128 LFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIK 187

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CS 625
           G ++  EE     ++ +MR SG   D F    L++A   + A ++G+  H   IK +   
Sbjct: 188 GHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFID 247

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           S+ F+  SLVDMY KCG ++ A  LF+++  R+ V+W+A++ G A++G   E++ +F  M
Sbjct: 248 SNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQM 307

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
            A  V P+SVTF  ++ ACS  G + +   + H    + G+E +V++Y+  +D   + G 
Sbjct: 308 LADSVTPNSVTFASIVLACSSLGSLKQG-RSVHGYMIRNGVELDVKNYTSFIDMYAKCGC 366

Query: 746 TKEAGELILSMP 757
              A  +   +P
Sbjct: 367 IVTAYRVFCQIP 378



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/565 (21%), Positives = 229/565 (40%), Gaps = 105/565 (18%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           SS + +    S+ R    T  L      +A+IL ++          +   Y + GSL  A
Sbjct: 10  SSRNPTKTLLSLFRF---TKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVA 66

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK 167
            + F+ +   +L SWN+ILA+  HS      +V + F+  R L+E         L   +K
Sbjct: 67  SKAFNHITFENLHSWNTILAS--HSKNKCFYDVLQLFK--RMLKEG-KLVDSFNLVFAVK 121

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
            C        ++  H  A+K+ L  D +V+ AL+N+Y++ G + EA  +F+ +  ++ V+
Sbjct: 122 ACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVI 181

Query: 228 WKVMLRAYAENGFGEE--VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV---- 281
           W VM++ +    F EE  VF LF  + RSG   D   V+ ++    ++    E +     
Sbjct: 182 WGVMIKGHLN--FSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGL 239

Query: 282 --------------------------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
                                       +A+KL    +  +VV+W+  ++G+ + G    
Sbjct: 240 CIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALE 299

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           +I  F  M+  +V  +SVTF   + A +   +L  G+ +HG  +++G    V    S I+
Sbjct: 300 SISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFID 359

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MY+K GC+           +  R    +PE                              
Sbjct: 360 MYAKCGCI----------VTAYRVFCQIPEK----------------------------- 380

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
                               ++ +W+ MI G+ +     +AL LF  M +  +  + +T 
Sbjct: 381 --------------------NVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTF 420

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDI 553
            + + AC     +++G   H  +M   + +       + ++D+  + G + +A S  N++
Sbjct: 421 VSVLSACSHSGRIEEGWS-HFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNM 479

Query: 554 PA-PDDVAWTTMISGCVDNGEEDLA 577
           P  P   AW  ++  C  +   +LA
Sbjct: 480 PTEPGASAWGALLGACRIHRRAELA 504



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 19/233 (8%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           I + F ++  R L S S+    F Q    S + +S  + SI+    S   L  G+S H  
Sbjct: 287 IIAGFARNG-RALESISM----FRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGY 341

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           ++ +    D     + + MY++CG +V A R+F ++P++++ SW++++  +   G     
Sbjct: 342 MIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGL---- 397

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV---WASETVHGYALKIGLVWDEF 195
              E   LF  +R      + +T   +L  C  SG +   W+          I  V + +
Sbjct: 398 -CAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHY 456

Query: 196 VSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML---RAYAENGFGEEV 244
               +V++  + GKI EA    + M  E     W  +L   R +      EEV
Sbjct: 457 --ACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEV 507


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 316/601 (52%), Gaps = 51/601 (8%)

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP-EGLHLSKQIHVHAIKNDT 422
           Y+   + ++ I MY  M  +  +  + FT   VL+A      EG+   KQIH    K   
Sbjct: 75  YTQKNIVDAPIRMYMDMQ-ISQVHPNCFTFLYVLKACGGTSVEGI--GKQIHGQTFKYGF 131

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
            ++ FV  +L+ +Y + G ++ A  +F+      + +W ++I GY+ + +  +AL +F  
Sbjct: 132 GSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKE 191

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M     + D I + + + A   +  L QGK +H    K G E +  +   +  MY K G 
Sbjct: 192 MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 251

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +  A+  FN +  P+ + W  MISG  +NG  + A+ ++ +M    +  D  T    V A
Sbjct: 252 VEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA 311

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
           S+ + +LE  R +   + K +   D FV   L+DMYAKCG+I  A  +F ++  ++ VLW
Sbjct: 312 SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLW 371

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           + M++G   HG+G+E + L+ +MK  GV P+  TFIG+L+AC  +GLV E +E FHLM +
Sbjct: 372 SVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD 431

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            +GIEP  +HYS +VD LGRAG   +A + I+SMP +   S+  ALL AC++      G+
Sbjct: 432 -HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGE 490

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD------------ 830
             AE+L  L+P+++  YV LSN++A+A+ W  V + R  M +K + KD            
Sbjct: 491 IAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNL 550

Query: 831 -----------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
                       +  IF +++ L KR+K  GYVP  + VL D+  EE E  L +HSE+LA
Sbjct: 551 ETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLA 610

Query: 880 RAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCA 916
            AYG+IST P + +                     L ++E +   A RFHH +DG+C C 
Sbjct: 611 VAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCG 670

Query: 917 D 917
           D
Sbjct: 671 D 671



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 197/433 (45%), Gaps = 45/433 (10%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA K     +  +++LWN  + GY Q       I  +++M  S V  +  TFL  L A  
Sbjct: 52  YAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG 111

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------- 383
           GT    +G+QIHG T K GF S V V NSL++MY+K G +                    
Sbjct: 112 GTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTS 171

Query: 384 -----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                  C ++ D   L SV+ A +++ E L   K IH    K 
Sbjct: 172 IISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV-EDLGQGKSIHGLVTKL 230

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               +  +  +L  +Y + G +  A + F   +  +L  WNAMI GY  +    +A++LF
Sbjct: 231 GLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLF 290

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             M T   R+D IT+ +AV A   +  L+  + +  Y  KS +  D  V++G++DMY KC
Sbjct: 291 REMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKC 350

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G++  A+ +F+ +   D V W+ MI G   +G    A+ +Y++M+ +GV P++ TF  L+
Sbjct: 351 GSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLL 410

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A      +++G ++   +              +VD+  + G +  AY     M ++  V
Sbjct: 411 TACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGV 470

Query: 661 -LWNAMLVGLAQH 672
            +W A+L     H
Sbjct: 471 SVWGALLSACKIH 483



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 148/297 (49%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q++V  I +      F+    I+     G +  A   F      D+  WNA+I GY   N
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
                + ++  M  S    +  T    +KACG   +   GKQ+H    K GF  ++ V +
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY K G +  A+ +F+ +     V+WT++ISG V NG+   AL+++ +MR   V P
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D      ++ A + +  L QG+ IH  + KL    +P + ISL  MYAK G +E A   F
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 259

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +M+  N +LWNAM+ G A +G GEE +KLF +M    +  DS+T    + A +  G
Sbjct: 260 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 36/326 (11%)

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEG-FRL 146
           RFL    +      G + YA + F ++ + D++ WN+I+  Y        +N+ +   R+
Sbjct: 34  RFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQ------KNIVDAPIRM 87

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           +  ++ S    +  T   +LK C  +      + +HG   K G   + FV  +LV++Y+K
Sbjct: 88  YMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAK 147

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           FG+I  A+ +FD + +R VV W  ++  Y +NG   E  ++F ++ +  + PD  ++  V
Sbjct: 148 FGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSV 207

Query: 267 L----------------GVISDLGKRHEEQV-----QAYAIKLLL------YNN--NSNV 297
           +                G+++ LG   E  +       YA + L+      +N     N+
Sbjct: 208 MTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNL 267

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           +LWN  +SGY   G    AI+ F  MI  N++ DS+T   A+ A A   +L L + + G 
Sbjct: 268 ILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGY 327

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV 383
             KS +     V   LI+MY+K G +
Sbjct: 328 ISKSEYRDDTFVNTGLIDMYAKCGSI 353



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 15/208 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARI--LNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           S++    +  DL  GKS H  +  L     PD  ++  L TMY++ G +  AR  F++M 
Sbjct: 206 SVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS--LTTMYAKRGLVEVARFFFNRME 263

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
             +LI WN++++ YA++G G      E  +LFR   E IT   R+    +    L+S  V
Sbjct: 264 KPNLILWNAMISGYANNGYGE-----EAIKLFR---EMITKNIRVDSITMRSAVLASAQV 315

Query: 176 WASETVH---GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            + E      GY  K     D FV+  L+++Y+K G I  A+ +FD + ++DVVLW VM+
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDD 260
             Y  +G G+E   L+ ++ ++G+CP+D
Sbjct: 376 MGYGLHGHGQEAICLYNEMKQAGVCPND 403



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 1/136 (0%)

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q++  LI        F+ I  ++     G++  A+  F+++   + +LWNA++ G  Q  
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +  ++++ DM+   V P+  TF+ VL AC  T  V    +  H    KYG    V   
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTS-VEGIGKQIHGQTFKYGFGSNVFVQ 138

Query: 734 SFLVDALGRAGRTKEA 749
           + LV    + G+   A
Sbjct: 139 NSLVSMYAKFGQISYA 154


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 214/760 (28%), Positives = 364/760 (47%), Gaps = 91/760 (11%)

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           +  L LA L++ C+++    + + VH    ++ L  D F+S   + +YSK   I  A  +
Sbjct: 4   SKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHV 63

Query: 217 FDGMQERDVVLWKVMLRAYAEN-------------------------------GFGEEVF 245
           FD +  +++  W  +L AY +                                G+  +  
Sbjct: 64  FDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQAL 123

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVI-----SDLGKRHEEQVQAYAIKLLLYNNNS----- 295
             +  +   G+ P   +   V         +D G+R    V    ++  +Y  N+     
Sbjct: 124 DTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMY 183

Query: 296 -------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                              N V +   + G  Q      A E F  M+R  ++ DSV+  
Sbjct: 184 AKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLS 243

Query: 337 VALAAVA----------GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
             L   A          G      G+Q+H  ++K GF   + + NSL++MY+K+G    +
Sbjct: 244 SMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIG---DM 300

Query: 387 RTDQFTLASVLRAS--------------SSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
            + +    ++ R S               +  +     +++     + D V    + TA 
Sbjct: 301 DSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTAC 360

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +    ++G +     +F+      L +WNA++ GY  + +  +A+ELF  M    +  D 
Sbjct: 361 V----KSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDR 416

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+A  + +C  L  L+ GK++HA + K GF  D+ V+S ++++Y KCG M  ++ +F+ 
Sbjct: 417 TTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSK 476

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  D V W +M++G   N     ALS + +MR  G  P EF+FA +V + + L++L QG
Sbjct: 477 LPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQG 536

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +Q HA ++K     D FVG SL++MY KCG++  A   F  M  RNTV WN M+ G AQ+
Sbjct: 537 QQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQN 596

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+G   L L+ DM + G +PD +T++ VL+ACS++ LV E  E F+ M +KYG+ P+V H
Sbjct: 597 GDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAH 656

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ ++D L RAGR  E   ++ +MP +  A +   +L +CR+  +    K  AE+L  L+
Sbjct: 657 YTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLD 716

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P +S++YVLL+N++++  +WDD    R  M    V+KDP 
Sbjct: 717 PQNSASYVLLANMYSSLGKWDDAHVVRDLMSHNQVRKDPG 756



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 182/705 (25%), Positives = 312/705 (44%), Gaps = 88/705 (12%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S S    ++++H I+    L GK  HAR+   +   D FL+N+ + +YS+C  +  A  +
Sbjct: 4   SKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHV 63

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT------------- 157
           FD +P +++ SWN+ILAAY       A N+    RLF  + +  T +             
Sbjct: 64  FDNIPHKNIFSWNAILAAYC-----KARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGY 118

Query: 158 ------------------SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
                             S +T A +   C S          HG  +K+GL  + +V  A
Sbjct: 119 ERQALDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNA 178

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L+ +Y+K G   +A  +F  + E + V +  M+   A+    +E   LF  + R G+  D
Sbjct: 179 LLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVD 238

Query: 260 DESVQCVLGVIS----DLGKRHE-------EQVQAYAIKL-------------------- 288
             S+  +LGV +    D+G  H        +Q+   ++KL                    
Sbjct: 239 SVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIG 298

Query: 289 --------LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                    +  N  +VV WN  ++GY    ++  A E    M     + D VT++  L 
Sbjct: 299 DMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLT 358

Query: 341 AVAGTDNLNLGQQIHGTTLKSGF--YSAVIVG-------NSLINMYSKMGCVCGLRTDQF 391
           A   + ++  G+QI           ++A++ G          + ++ KM   C    D+ 
Sbjct: 359 ACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQ-HPDRT 417

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           TLA +L + + L   L   K++H  + K     D +V+++LI+VY + G M  ++++F  
Sbjct: 418 TLAVILSSCAELG-FLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSK 476

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D+  WN+M+ G+ +++    AL  F  M   G    E + AT V +C  L  L QG
Sbjct: 477 LPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQG 536

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q HA  +K GF  D+ V S +++MY KCG +  A+  F+ +P  + V W  MI G   N
Sbjct: 537 QQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQN 596

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI-HANLIKLDCSSDPFV 630
           G+   AL +Y+ M  SG  PD+ T+  ++ A S    +++G +I +A L K         
Sbjct: 597 GDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAH 656

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
              ++D  ++ G   +  ++   M  + + V+W  +L     H N
Sbjct: 657 YTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHAN 701


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 266/957 (27%), Positives = 439/957 (45%), Gaps = 156/957 (16%)

Query: 48  SSSSSSSQWFSILRHAISTSDLLLG-KSTHARILNSSQIPDRFLTNNLMTM-------YS 99
           SS   SS  FS   H +     L   +  HA+++   ++P +    NL+TM       Y 
Sbjct: 22  SSPQFSSPKFSPFFHPLGGIRTLNSVRELHAQMI---KMPKK---GNLVTMDGSMMRNYL 75

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
             G    A ++F     R+ + WNS L  +A  G G++  + E F+      + + F S+
Sbjct: 76  EFGDFESATKVFFVGFARNYLLWNSFLEEFASFG-GDSHEILEVFKELHD--KGVKFDSK 132

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
             L  +LK+CL+   +W    VH   LK G   D  +S AL+N+Y K   I  A  +FD 
Sbjct: 133 -ALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDE 191

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE- 278
              ++  LW  ++ A   +   E+   L   +  +     D ++  +L     L   +E 
Sbjct: 192 TPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEG 251

Query: 279 EQVQAYAIKLLLYNNNS----------------------------NVVLWNKKLSGYLQV 310
           +Q+  Y I+    +N S                            N+  WN  +S Y   
Sbjct: 252 KQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVN 311

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G  +GA + F  M  S+++ D +T+          ++L  G  + G+             
Sbjct: 312 GCLNGAWDLFREMESSSIKPDIITW----------NSLLSGHLLQGS-----------YE 350

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           N L N+ S      G + D  ++ S L+A   L    +L K+IH + +++    D +V T
Sbjct: 351 NVLTNIRSLQSA--GFKPDSCSITSALQAVIELGY-FNLGKEIHGYIMRSKLEYDVYVCT 407

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +L+D+Y +N  + +AE +F +    ++  WN++I GY            +  +  + E+L
Sbjct: 408 SLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYT-----------YKGLFDNAEKL 456

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
                         L+ +K+           G + DL   + ++  Y   G   +A ++ 
Sbjct: 457 --------------LIQMKE----------EGIKADLVTWNSLVSGYSMSGCSEEALAVI 492

Query: 551 NDIPA----PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           N I +    P+ V+WT MISGC  N     AL  + QM+   V P+  T + L++A +  
Sbjct: 493 NRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGP 552

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           + L++G +IH   +K     D ++  +L+DMY+K G ++ A+ +F+ +  +    WN M+
Sbjct: 553 SLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMM 612

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
           +G A +G+GEE   LF++M   G+ PD++TF  +LS C  +GLV + ++ F  M+  Y I
Sbjct: 613 MGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSI 672

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P +EHYS +VD LG+AG   EA + I +MP +A AS+  A+L ACR+  D +  +  A 
Sbjct: 673 NPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAAR 732

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM-----KRKNV-------------- 827
            L  LEP++S+ YVL+ NI++   +W DV   +  M     K  NV              
Sbjct: 733 NLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFS 792

Query: 828 ---KKDPAD-LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
              K  P +  I+  +  LI  IK+ GYVPDT+ V  ++++ EKE+ L  H+EKLA  YG
Sbjct: 793 TEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYG 852

Query: 884 LIS----TPPSSV-----------------ILSNKEPLYAN--RFHHLRDGMCPCAD 917
           L+     TP   V                 +  N+E    +  RFHH  +G C C D
Sbjct: 853 LMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCND 909



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 297/671 (44%), Gaps = 59/671 (8%)

Query: 17  YVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSI-LRHAISTSDLLLGKST 75
           Y++++SF ++ + +    S  +L   ++ H       S+  ++ L+  ++  +L LG   
Sbjct: 95  YLLWNSFLEE-FASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEV 153

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA +L      D  L+  L+ +Y +C  +  A ++FD+ P ++   WN+I+ A   S   
Sbjct: 154 HACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRS--- 210

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
             E   +   L R ++ +    +  T+  LL+ C     +   + +HGY ++ G V +  
Sbjct: 211 --ERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTS 268

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           +  ++V++YS+  ++  A+ +FD  ++ ++  W  ++ +YA NG     + LF ++  S 
Sbjct: 269 ICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSS 328

Query: 256 LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
           + PD                                     ++ WN  LSG+L  G    
Sbjct: 329 IKPD-------------------------------------IITWNSLLSGHLLQGSYEN 351

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
            +    ++  +  + DS +   AL AV      NLG++IHG  ++S     V V  SL++
Sbjct: 352 VLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVD 411

Query: 376 MYSKMGCVCGLRTD-QFTLASVLRASSSLPEGLHL------SKQIHVHAIKNDTVADSFV 428
           MY K  C+         T    + A +SL  G         ++++ +   +    AD   
Sbjct: 412 MYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVT 471

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLA----TWNAMIFGYILSNNSHKALELFSHMH 484
             +L+  Y  +G   EA  +        L     +W AMI G   + N   AL+ FS M 
Sbjct: 472 WNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQ 531

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
               + +  TI+T ++AC    +LK+G+++H ++MK GF  D+ +++ ++DMY K G + 
Sbjct: 532 EENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLK 591

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A  +F +I       W  M+ G    G  +   +++  M  +G+ PD  TF  L+    
Sbjct: 592 VAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCK 651

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
               +  G + + + +K D S +P +     +VD+  K G +++A      M  + +  +
Sbjct: 652 NSGLVMDGWK-YFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASI 710

Query: 662 WNAMLVGLAQH 672
           W A+L     H
Sbjct: 711 WGAVLAACRLH 721


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 193/581 (33%), Positives = 304/581 (52%), Gaps = 50/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G + D FT   VL+A   L     + +++H   +      D +V  +++ +Y + G +  
Sbjct: 119 GQKPDNFTYPFVLKACGDLLL-REMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEA 177

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     DL +WN M+ G++ +  +  A E+F  M   G   D  T+   + ACG 
Sbjct: 178 ARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGD 237

Query: 505 LLMLKQGKQMHAYAMKSGFELDLC---VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           ++ LK GK++H Y +++G    +C   + + I+DMY  C ++  A+ +F  +   D V+W
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSW 297

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            ++ISG    G+   AL ++ +M + G VPDE T   ++ A + ++AL  G  + + ++K
Sbjct: 298 NSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVK 357

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                +  VG +L+ MYA CG++  A  +F +M  +N      M+ G   HG G E + +
Sbjct: 358 RGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISI 417

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F +M   GV PD   F  VLSACS++GLV E  E F+ M   Y +EP   HYS LVD LG
Sbjct: 418 FYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLG 477

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG   EA  +I +M  + +  +  ALL ACR+  + +     A+KL  L P   S YV 
Sbjct: 478 RAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVC 537

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI+AA  +W+DV + R  + ++ ++K P                       +D I+AK
Sbjct: 538 LSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAK 597

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           ++ L +++K+ GY PDT  VL DVEEE KE+ L+ HSE+LA A+ LI+T P + I     
Sbjct: 598 LKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKN 657

Query: 894 ----------------LSNKEPLYAN--RFHHLRDGMCPCA 916
                           L+N+E +  +  RFHH RDG+C C 
Sbjct: 658 LRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCG 698



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 224/477 (46%), Gaps = 51/477 (10%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFE 450
           TL   L  S SL + L    Q+H H     T+  +++++T L   Y   G M  A+++F+
Sbjct: 27  TLLQSLTNSKSLTQAL----QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFD 82

Query: 451 N---KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
               K+ F    WN+MI GY  +N+  +AL L+  M   G++ D  T    +KACG LL+
Sbjct: 83  QIVLKNSF---LWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLL 139

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            + G+++HA  +  G E D+ V + IL MY K G +  A+ +F+ +   D  +W TM+SG
Sbjct: 140 REMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSG 199

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS- 626
            V NGE   A  ++  MR  G V D  T   L+ A   +  L+ G++IH  +++   S  
Sbjct: 200 FVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGR 259

Query: 627 --DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + F+  S++DMY  C ++  A  LF+ + +++ V WN+++ G  + G+  + L+LF  
Sbjct: 260 VCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGR 319

Query: 685 MKAHGVEPDSVTFIGVLSACS-YTGLVSEAYENFHLMREKYGI----------------- 726
           M   G  PD VT I VL+AC+  + L   A    ++++  Y +                 
Sbjct: 320 MVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGS 379

Query: 727 ------------EPEVEHYSFLVDALGRAGRTKEAGELILSM---PFEASASMHRALLGA 771
                       E  +   + +V   G  GR +EA  +   M          +  A+L A
Sbjct: 380 LVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSA 439

Query: 772 CRVQGDTETGKWVAEKLM---ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
           C   G  + GK +  K+    ++EP   + Y  L ++   A   D+  +    MK K
Sbjct: 440 CSHSGLVDEGKEIFYKMTRDYSVEP-RPTHYSCLVDLLGRAGYLDEAYAVIENMKLK 495



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 126/592 (21%), Positives = 233/592 (39%), Gaps = 106/592 (17%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNNLM 95
           +L+P   K   +S+  S Q  ++L+   ++  L      HA +     +  + +L   L 
Sbjct: 9   TLIP---KPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLA 65

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
             Y+ CG + YA+ +FD++  ++   WNS++  YA +      + +    L+  +     
Sbjct: 66  ACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN-----NSPSRALFLYLKMLHFGQ 120

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
                T   +LK C           VH   +  GL  D +V  +++++Y KFG +  A+ 
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LG 274
           +FD M  RD+  W  M+  + +NG     F +F D+ R G   D  ++  +L    D + 
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMD 240

Query: 275 KRHEEQVQAYAIK----------------LLLYNNN---------------SNVVLWNKK 303
            +  +++  Y ++                + +Y N                 +VV WN  
Sbjct: 241 LKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSL 300

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           +SGY + GD   A+E F  M+      D VT +  LAA      L LG  +    +K G+
Sbjct: 301 ISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGY 360

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
              V+VG +LI MY+  G          +L    R    +PE             KN   
Sbjct: 361 VVNVVVGTALIGMYANCG----------SLVCACRVFDEMPE-------------KN--- 394

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
                                            L     M+ G+ +     +A+ +F  M
Sbjct: 395 ---------------------------------LPACTVMVTGFGIHGRGREAISIFYEM 421

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCG 541
              G   DE      + AC    ++ +GK++  Y M   + ++   +  S ++D+  + G
Sbjct: 422 LGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF-YKMTRDYSVEPRPTHYSCLVDLLGRAG 480

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
            + +A ++  ++   P++  WT ++S C      ++ L++    +L  + PD
Sbjct: 481 YLDEAYAVIENMKLKPNEDVWTALLSAC--RLHRNVKLAVISAQKLFELNPD 530



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 8/211 (3%)

Query: 502 CGCLLM-------LKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           CG LL        L Q  Q+HA+    G    +  +++ +   Y  CG M  AQ IF+ I
Sbjct: 25  CGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQI 84

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              +   W +MI G   N     AL +Y +M   G  PD FT+  ++KA   L   E GR
Sbjct: 85  VLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGR 144

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           ++HA ++      D +VG S++ MY K G++E A ++F +M +R+   WN M+ G  ++G
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
                 ++F DM+  G   D  T + +LSAC
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSAC 235


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 239/878 (27%), Positives = 382/878 (43%), Gaps = 206/878 (23%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P+   +N  +T + R G +  A RLF  MP R   ++N++LA Y+ +G            
Sbjct: 36  PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG------------ 83

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
                        RL LA  L   +                      D +    L++  +
Sbjct: 84  -------------RLPLAASLFRAIPRP-------------------DNYSYNTLLHALA 111

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
               + +A+ LFD M  RD V + VM+ ++A +G      H F       L P+ ++V  
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF------DLAPEKDAVS- 164

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                             WN  L+ Y++    +G +E    +  
Sbjct: 165 ----------------------------------WNGMLAAYVR----NGRVEEARGLFN 186

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S  ++D +++   ++       ++  +++            V+  N +++ Y++ G    
Sbjct: 187 SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRD----VVSWNIMVSGYARRG---- 238

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
                  +    R   + P                  V D F  TA++  Y +NG + EA
Sbjct: 239 ------DMVEARRLFDAAP------------------VRDVFTWTAVVSGYAQNGMLEEA 274

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     +  +WNAM+  YI      +A ELF+ M                      
Sbjct: 275 RRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR------------------- 315

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
                               ++   + +L  Y + G + +A+++F+ +P  D V+W  M+
Sbjct: 316 --------------------NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +     G  +  L ++ +M   G   +   FA ++   + + ALE G Q+H  LI+    
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
              FVG +L+ MY KCGN+EDA   F++M+ R+ V WN M+ G A+HG G+E L++F+ M
Sbjct: 416 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 475

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +    +PD +T +GVL+ACS++GLV +    F+ M   +G+  + EHY+ ++D LGRAGR
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGR 535

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA +L+  MPFE  ++M  ALLGA R+  + E G+  AEK+  LEP ++  YVLLSNI
Sbjct: 536 LAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNI 595

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +A++ +W D    R  M+ + VKK P                        + I+A +E L
Sbjct: 596 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY- 901
             R+K+ GYV  TD VL DVEEEEKE  L YHSEKLA AYG+++ PP   I   K     
Sbjct: 656 DMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVC 715

Query: 902 ----------------------ANRFHHLRDGMCPCAD 917
                                 +NRFHH R G C C D
Sbjct: 716 GDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGD 753



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 222/522 (42%), Gaps = 78/522 (14%)

Query: 57  FSILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           ++ L HA++ S  L      AR + +   + D    N +++ ++  G +  AR  FD  P
Sbjct: 103 YNTLLHALAVSSSL----ADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++D +SWN +LAAY  +G      V E   LF S  E    +            L SGYV
Sbjct: 159 EKDAVSWNGMLAAYVRNGR-----VEEARGLFNSRTEWDVISWN---------ALMSGYV 204

Query: 176 -W-----ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            W     A E       +  + W+  VSG     Y++ G + EA+ LFD    RDV  W 
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSG-----YARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
            ++  YA+NG  EE   +F  +      P+  +V     V + + +R  ++ +    +L 
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAK----ELF 309

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 NV  WN  L+GY Q G    A   F  M     Q D+V++   LAA        
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM----PQKDAVSWAAMLAA-------- 357

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
                         YS        + ++ +MG  CG   ++   A VL   + +   L  
Sbjct: 358 --------------YSQGGCSEETLQLFIEMG-RCGEWVNRSAFACVLSTCADIA-ALEC 401

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
             Q+H   I+       FV  AL+ +Y + G+M +A   FE  +  D+ +WN MI GY  
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFE 524
                +ALE+F  M T+  + D+IT+   + AC    ++++G        H + + +  E
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE 521

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
              C    ++D+  + G + +A  +  D+P  PD   W  ++
Sbjct: 522 HYTC----MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 9/201 (4%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F++        + S +  +L      + L  G   H R++ +      F+ N L+ 
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CG++  AR  F++M +RD++SWN+++A YA  G G      E   +F  +R + T 
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK-----EALEIFDMMRTTSTK 481

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYAL--KIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +TL  +L  C  SG V      + Y++    G+         ++++  + G++ EA 
Sbjct: 482 PDDITLVGVLAACSHSGLV-EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAH 540

Query: 215 FLFDGMQ-ERDVVLWKVMLRA 234
            L   M  E D  +W  +L A
Sbjct: 541 DLMKDMPFEPDSTMWGALLGA 561



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 113/302 (37%), Gaps = 63/302 (20%)

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            E ++  S+  +  +++ G + DA+ +F  +P      +  M++G   NG   LA S++ 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQI------------------HAN------ 618
            +      PD +++  L+ A +  ++L   R +                  HAN      
Sbjct: 94  AI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 619 ---LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
                 L    D      ++  Y + G +E+A  LF      + + WNA++ G  Q G  
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209

Query: 676 EETLKLFEDMKAHGV-------------------------EP--DSVTFIGVLSACSYTG 708
            E  +LF+ M    V                          P  D  T+  V+S  +  G
Sbjct: 210 SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           ++ EA   F  M E+  +      ++ +V A  +     EA EL   MP    AS +  L
Sbjct: 270 MLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTML 324

Query: 769 LG 770
            G
Sbjct: 325 TG 326


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 234/812 (28%), Positives = 384/812 (47%), Gaps = 89/812 (10%)

Query: 105  VYARRLFDKMPDRDL--ISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLT 161
            V+ RR   ++ D  +   S NS + A    GE       +   L+ +    S  +TS  T
Sbjct: 509  VHIRRRLSRLADSYISPASVNSGIRALIQKGE-----YLQALHLYTKHDGSSPLWTSVFT 563

Query: 162  LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
               LLK C S   + + +T+HG  + +G  +D F++ +LVN+Y K G +  A  +FDG  
Sbjct: 564  FPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 623

Query: 222  E-----RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
            +     RDV +   M+  Y +    +E    F  +   G+ PD  S+  V+ V+   G  
Sbjct: 624  QSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNF 683

Query: 277  HEE---QVQAYAIK-----------------------------LLLYNNNSNVVLWNKKL 304
              E   Q+  Y ++                              +   + SNVVLWN  +
Sbjct: 684  RREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMI 743

Query: 305  SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
             G+        ++E ++    ++V+  S +F  AL A + ++N   G+QIH   +K G  
Sbjct: 744  VGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLD 803

Query: 365  SAVIVGNSLINMYSKMG----------CVCGLRTD-----------------QFTLASVL 397
            +   V  SL++MYSK G          CV   R +                    L   +
Sbjct: 804  NDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFM 863

Query: 398  RASSSLPEGLHLS---------------KQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
            R  S LP+   LS               K +H    K    +   + +AL+ +Y + G  
Sbjct: 864  RQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCD 923

Query: 443  AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DEITIATAVK 500
             +A  +F++ +  D+  W ++I G   +    +AL++F  M    + L  D   + + + 
Sbjct: 924  TDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVIN 983

Query: 501  ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
            AC  L  L  G Q+H   +K+G  L++ V S ++D+Y KCG    A  +F  +   + VA
Sbjct: 984  ACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVA 1043

Query: 561  WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
            W +MIS    N   +L++ +++ M   G+ PD  +   ++ A S   +L +G+ +H   +
Sbjct: 1044 WNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 1103

Query: 621  KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
            +L   SD  +  +L+DMY KCG  + A  +FK+M  ++ + WN M+ G   HG+    L 
Sbjct: 1104 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALS 1163

Query: 681  LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
            LF+++K  G  PD VTF+ ++SAC+++G V E    F +M++ YGIEP++EHY+ +VD L
Sbjct: 1164 LFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLL 1223

Query: 741  GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
            GRAGR +EA   I +MP EA +S+   LL A R   + E G   AEKL+ +EP   S YV
Sbjct: 1224 GRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 1283

Query: 801  LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             L N++  A   ++     GEMK + ++K P 
Sbjct: 1284 QLINLYMEAGLKNEAAKLLGEMKERGLQKQPG 1315



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 187/777 (24%), Positives = 336/777 (43%), Gaps = 103/777 (13%)

Query: 41   FLQKSHFSSS--SSSSQWFSI------LRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
            +LQ  H  +    SS  W S+      L+   S ++L  GK+ H  I+      D F+  
Sbjct: 541  YLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIAT 600

Query: 93   NLMTMYSRCGSLVYARRLFD-----KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            +L+ MY +CG L YA ++FD      +  RD+   NS++  Y            EG   F
Sbjct: 601  SLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYF-----KFRRFKEGVGCF 655

Query: 148  RSLRESITFTSRLTLAPLLKLCLSSGYVWASE--TVHGYALKIGLVWDEFVSGALVNIYS 205
            R +          +L+ ++ +    G     +   +HGY L+  L  D F+  AL+++Y 
Sbjct: 656  RRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYF 715

Query: 206  KFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            KFG   +A  +F  ++++ +VVLW VM+  +  +   E    L++    + +     S  
Sbjct: 716  KFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFT 775

Query: 265  CVLGVISDL-GKRHEEQVQAYAIKLLLYNN----------------------------NS 295
              LG  S         Q+    +K+ L N+                            + 
Sbjct: 776  GALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDK 835

Query: 296  NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
             + +WN  ++ Y++  + + A+E F  M + +V  DS T    ++  +     + G+ +H
Sbjct: 836  RLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVH 895

Query: 356  GTTLKSGFYSAVIVGNSLINMYSKMGC-------------------------VC------ 384
                K    S   + ++L+ +YSK GC                         +C      
Sbjct: 896  AELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 955

Query: 385  --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                           L+ D   + SV+ A + L E L    Q+H   IK   V + FV +
Sbjct: 956  EALKVFGDMKDDDDSLKPDSDIMTSVINACAGL-EALSFGLQVHGSMIKTGQVLNVFVGS 1014

Query: 431  ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            +LID+Y + G    A  +F +    ++  WN+MI  Y  +N    ++ELF+ M + G   
Sbjct: 1015 SLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFP 1074

Query: 491  DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
            D ++I + + A      L +GK +H Y ++ G   D  + + ++DMYVKCG    A++IF
Sbjct: 1075 DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF 1134

Query: 551  NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
              +     + W  MI G   +G+   ALS++ +++ +G  PD+ TF  L+ A +    +E
Sbjct: 1135 KKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVE 1194

Query: 611  QGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLV 667
            +G+     ++K D   +P +    ++VD+  + G +E+AY   K M    ++ +W  +L 
Sbjct: 1195 EGKNFF-EIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLS 1253

Query: 668  GLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMREK 723
                H N E  L +    K   +EP+   T++ +++     GL +EA +    M+E+
Sbjct: 1254 ASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKER 1308


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 198/617 (32%), Positives = 318/617 (51%), Gaps = 75/617 (12%)

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           L  G+++H     SGF   + + N L+ MY+K            +L    +    +PE  
Sbjct: 86  LQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCD----------SLMDSQKLFDEMPERD 135

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
             S  I                  LI  Y + G + EA+ LF+     D  +W AMI GY
Sbjct: 136 LCSWNI------------------LISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGY 177

Query: 468 ILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           +  +  ++ALELF  M  S   + ++ T+++A+ A   +  L+ GK++H Y M++G + D
Sbjct: 178 VRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSD 237

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             V S + DMY KCG++ +A+ IF+ +   D V WT MI     +G       ++  +  
Sbjct: 238 EVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLR 297

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
           SG+ P+EFTF+ ++ A +  T+ E G+++H  + ++      F   +LV MY+KCGN+  
Sbjct: 298 SGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVS 357

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  +FK+    +   W +++ G AQ+G  +E ++ FE +   G +PD +TF+GVLSAC++
Sbjct: 358 AERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAH 417

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            GLV +  + FH ++E+YG+    +HY+ ++D L R+G+  EA  +I  M  +    +  
Sbjct: 418 AGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWA 477

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
           +LLG CR+ G+ +  +  AE L  +EP + + YV L+NI+A A  W +V   R  M  + 
Sbjct: 478 SLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRG 537

Query: 827 VKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVE 863
           V K P                       +  I   +  L KR+KE G+VPDT+FVL DVE
Sbjct: 538 VVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVE 597

Query: 864 EEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY- 901
           +E+KE+ L YHSEKLA A+G+ISTP  + I                     ++N++ +  
Sbjct: 598 DEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVR 657

Query: 902 -ANRFHHLRDGMCPCAD 917
            +NRFH   DG C C D
Sbjct: 658 DSNRFHFFEDGHCSCRD 674



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 216/487 (44%), Gaps = 100/487 (20%)

Query: 3   TQLQANLKPRHK----HTYVIFSSFTKDTYR-----NLPSFSLSLLPFLQKS-------- 45
           T+  ANLKP H          F S TKDT       N   F  ++    Q++        
Sbjct: 2   TRFLANLKPSHSSSPFQPKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQI 61

Query: 46  -HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
            H     S+S + ++++  I +  L  GK  H  I  S  +P  F+ N L+ MY++C SL
Sbjct: 62  LHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSL 121

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAH--------------------------SGEGNAE 138
           + +++LFD+MP+RDL SWN +++ YA                           SG    +
Sbjct: 122 MDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHD 181

Query: 139 NVTEGFRLFRSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
              E   LFR ++ S    S + T++  L    +   +   + +HGY ++ GL  DE V 
Sbjct: 182 RPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVW 241

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            AL ++Y K G I EA+ +FD M +RD+V W  M+  Y ++G  +E F LF DL RSG+ 
Sbjct: 242 SALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIR 301

Query: 258 PDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK-------------LLLYNNNSNVV- 298
           P++ +   VL   +     +LGK+    V  Y  +             + +Y+   N+V 
Sbjct: 302 PNEFTFSGVLNACANQTSEELGKK----VHGYMTRVGFDPFSFAASALVHMYSKCGNMVS 357

Query: 299 --------------LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA- 343
                          W   ++GY Q G    AI  F  +++S  Q D +TF+  L+A A 
Sbjct: 358 AERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAH 417

Query: 344 ------GTDNLNLGQQIHGTTLKSGFYSAVI-------VGNSLINMYSKMGCVCGLRTDQ 390
                 G D  +  ++ +G T  +  Y+ +I         +   N+ SKM     ++ D+
Sbjct: 418 AGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKM----SMKPDK 473

Query: 391 FTLASVL 397
           F  AS+L
Sbjct: 474 FLWASLL 480



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 33/294 (11%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ-------- 547
           +T +++C    +L+QGK++H +   SGF   L + + +L+MY KC +++D+Q        
Sbjct: 74  STLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPE 133

Query: 548 -----------------------SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
                                  S+F+ +P  D+ +WT MISG V +   + AL ++  M
Sbjct: 134 RDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMM 193

Query: 585 RLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           + S     ++FT +  + A++ +  L  G++IH  +++    SD  V  +L DMY KCG+
Sbjct: 194 KRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGS 253

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           IE+A  +F +M  R+ V W AM+    Q G  +E   LF D+   G+ P+  TF GVL+A
Sbjct: 254 IEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNA 313

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           C+      E  +  H    + G +P     S LV    + G    A  +    P
Sbjct: 314 CA-NQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP 366



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 120/302 (39%), Gaps = 52/302 (17%)

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + +A  I + I  P    ++T+I  C+ +        ++  ++LSG VP  F    L++ 
Sbjct: 55  LKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEM 114

Query: 603 SSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
            +   +L   +++   + + D CS +      L+  YAK G +++A  LF +M  R+   
Sbjct: 115 YAKCDSLMDSQKLFDEMPERDLCSWN-----ILISGYAKMGLLQEAKSLFDKMPERDNFS 169

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAH--------------------------------- 688
           W AM+ G  +H    E L+LF  MK                                   
Sbjct: 170 WTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYI 229

Query: 689 ---GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G++ D V +  +       G + EA   F  M     ++ ++  ++ ++D   + GR
Sbjct: 230 MRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKM-----VDRDIVTWTAMIDRYFQDGR 284

Query: 746 TKEAGEL---ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL--MALEPFDSSAYV 800
            KE  +L   +L      +      +L AC  Q   E GK V   +  +  +PF  +A  
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASA 344

Query: 801 LL 802
           L+
Sbjct: 345 LV 346


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 217/708 (30%), Positives = 343/708 (48%), Gaps = 77/708 (10%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           A A +L       N+V +   +  + Q GD   A   F  +     + +       L   
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA 172

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD-QFTLASVLR--- 398
              D   L   +H    K G      VG+ LI+ YS    +C L +D +     ++R   
Sbjct: 173 IAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYS----LCSLVSDAEHVFNGIVRKDA 228

Query: 399 ----------ASSSLPEGLHLSKQ-------------IHVHAIKNDTVADSFVSTALIDV 435
                     + +  PE      Q             IH  AIK     +  V  AL+D+
Sbjct: 229 VVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDM 288

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G + +A   FE     D+   + MI  Y  SN + +A ELF  +  S    +E ++
Sbjct: 289 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 348

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           ++ ++AC  ++ L  GKQ+H +A+K G E DL V + ++D Y KC  M  +  IF+ +  
Sbjct: 349 SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRD 408

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            ++V+W T++ G   +G  + ALS++ +M+ + +   + T++ +++A +   ++    QI
Sbjct: 409 ANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 468

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H ++ K   ++D  +G SL+D YAKCG I DA  +F+ +  R+ + WNA++ G A HG  
Sbjct: 469 HCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQA 528

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            + L+LF+ M    VE + +TF+ +LS C  TGLV+     F  MR  +GI+P +EHY+ 
Sbjct: 529 ADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC 588

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +V  LGRAGR  +A + I  +P   SA + RALL +C +  +   G++ AEK++ +EP D
Sbjct: 589 IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQD 648

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
            + YVLLSN++AAA   D V   R  M+   V+K P                        
Sbjct: 649 ETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDM 708

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
            +I A +E L  +    GY+PD + VL DV++E+K R L+ HSE+LA AYGL+ TPP   
Sbjct: 709 RVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHP 768

Query: 893 I---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           I                     +  +E +    NRFHH  DG C C D
Sbjct: 769 IRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGD 816



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 172/690 (24%), Positives = 311/690 (45%), Gaps = 98/690 (14%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQW-------------------FSILRH---AISTSD 68
           LP+ S  + P  Q+  F++ +++ QW                   F+  R     I+  D
Sbjct: 17  LPTLSCPVAP--QRRGFAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGD 74

Query: 69  LLLGKSTHARILNSSQIP--DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
              G++ H  ++    +   D F  N L+ MY + G L  ARRLFD+MP+R+++S+ +++
Sbjct: 75  ARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLV 134

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
            A+A  G+  A        LFR LR      ++  L  +LKL ++      +  VH  A 
Sbjct: 135 QAHAQRGDFEAAAA-----LFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K+G   + FV   L++ YS    + +A+ +F+G+  +D V+W  M+  Y+EN   E  F 
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR 249

Query: 247 -------LFVDLHRSGL--CPD---DESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN 293
                  L +   R G+  C     +++   V G + D+  K  + +    A +++ Y+ 
Sbjct: 250 CAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD- 308

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             +V+L +  +S Y Q   N  A E F+ ++RS+V  +  +    L A      L+ G+Q
Sbjct: 309 --DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ 366

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSK---------------------------------- 379
           IH   +K G  S + VGN+L++ Y+K                                  
Sbjct: 367 IHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGL 426

Query: 380 ----MGCVCGLRT-----DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
               +   C ++       Q T +SVLRA +S     H + QIH    K+    D+ +  
Sbjct: 427 GEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH-AGQIHCSIEKSTFNNDTVIGN 485

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +LID Y + G + +A  +F++    D+ +WNA+I GY L   +  ALELF  M+ S    
Sbjct: 486 SLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVES 545

Query: 491 DEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           ++IT    +  C    ++  G  +  +  +  G +  +   + I+ +  + G + DA   
Sbjct: 546 NDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQF 605

Query: 550 FNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLT 607
             DIP AP  + W  ++S C+ +  +++AL  +   ++  + P DE T+ +L    +   
Sbjct: 606 IGDIPSAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAG 663

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           +L+Q   +  ++  +     P  G+S V++
Sbjct: 664 SLDQVALLRKSMRNIGVRKVP--GLSWVEI 691



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 13/261 (4%)

Query: 18  VIFSSFTKDTY----RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGK 73
           VI  SF    Y    +N  +F L  L  ++ S   +  S S   S+L+   +   L  GK
Sbjct: 310 VILLSFMISRYAQSNQNEQAFEL-FLRLMRSSVLPNEYSLS---SVLQACTNMVQLDFGK 365

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
             H   +      D F+ N LM  Y++C  +  + ++F  + D + +SWN+I+  ++ SG
Sbjct: 366 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSG 425

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
            G      E   +F  ++ +    +++T + +L+ C S+  +  +  +H    K     D
Sbjct: 426 LGE-----EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 480

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             +  +L++ Y+K G IR+A  +F  + ERD++ W  ++  YA +G   +   LF  +++
Sbjct: 481 TVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK 540

Query: 254 SGLCPDDESVQCVLGVISDLG 274
           S +  +D +   +L V    G
Sbjct: 541 SNVESNDITFVALLSVCCSTG 561



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 96/193 (49%), Gaps = 2/193 (1%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVDAQ 547
           +D    A  ++ C      + G+ +H + ++ G    LDL  ++ +L+MY K G +  A+
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +P  + V++ T++      G+ + A +++ ++R  G   ++F    ++K +  + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A      +H+   KL    + FVG  L+D Y+ C  + DA  +F  +  ++ V+W AM+ 
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236

Query: 668 GLAQHGNGEETLK 680
             +++   E   +
Sbjct: 237 CYSENDCPENAFR 249



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)

Query: 590 VPDEFTFAILVKASSCLTALEQ--GRQIHANLIKLDCSS--DPFVGISLVDMYAKCGNIE 645
           VP   +FA   +   C+   +   GR +H ++++       D F    L++MY K G + 
Sbjct: 54  VPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLA 113

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
            A  LF +M  RN V +  ++   AQ G+ E    LF  ++  G E +      +L
Sbjct: 114 SARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTML 169


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 215/704 (30%), Positives = 358/704 (50%), Gaps = 76/704 (10%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL---F 217
           T   LLK   + G +     +H +  K G+  ++++S  L+ +Y  + K  EA  +   F
Sbjct: 23  TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           DG    D+V+   M+ A  + G  +E   LF ++ ++    ++ S   ++      G+  
Sbjct: 83  DGF---DLVVHNCMISANVQRGNLDEARKLFDEMPQT----NEISWTALISGFMKYGRVR 135

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
           E      ++     N   NVV W   +SGY+Q G +  A++ F+ ++ S V+ + VTF  
Sbjct: 136 E------SMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTS 189

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
            + A A   +  LG  + G  +K+G+   + V NSLI +  +MG                
Sbjct: 190 VVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMG---------------- 233

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
                    +HL++++     + D V+     TA++D+Y     + EA  +F+     + 
Sbjct: 234 --------EIHLAREVFDRMEEKDVVS----WTAILDLYVEMDELGEARRIFDEMPQRNE 281

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +W+AMI  Y  S    ++L LF  M   G + +    ++ + A   +  L+ G  +H +
Sbjct: 282 VSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGH 341

Query: 518 AMKSGFELDLCVSSGILDMYVKCG---------------------AMV----------DA 546
             K GFE D+ VSS ++DMY KCG                     AMV          +A
Sbjct: 342 VTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEA 401

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           + +FN +P  ++V+W+ +I+G +D  + D    ++++M L G +P++ TF+ L+ A +  
Sbjct: 402 KYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACAST 461

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            +L++G+ +H  ++KL    D +VG +L DMYAK G+IE +  +F +M  +N V W AM+
Sbjct: 462 ASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMI 521

Query: 667 VGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
            GLA+ G  EE+L LFE+M K   + P+ V F+ VL ACS++GLV +    F+ M   YG
Sbjct: 522 QGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYG 581

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           ++P+  H++ +VD L RAGR  EA E I SMPF+   +   ALL  C+   + E  + VA
Sbjct: 582 LKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVA 641

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            KL  +   + + YVLLSNI+A+A +W DV   R  MK K +KK
Sbjct: 642 GKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKK 685



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 170/669 (25%), Positives = 286/669 (42%), Gaps = 120/669 (17%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF------LTNNLMTMYSR 100
           F +  SS Q+ SI         LL+    + +   + QI   F      + N +++   +
Sbjct: 48  FKTGISSEQYISI--------KLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSG---------EGNA-ENVT--------- 141
            G+L  AR+LFD+MP  + ISW ++++ +   G         E N  +NV          
Sbjct: 100 RGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGY 159

Query: 142 -------EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
                  E  +LF  L ES    +++T   +++ C + G      +V G  +K G   D 
Sbjct: 160 VQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDL 219

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
            VS +L+ +  + G+I  A+ +FD M+E+DVV W  +L  Y E     E   +F      
Sbjct: 220 AVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIF------ 273

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
                DE  Q                               N V W+  ++ Y Q G   
Sbjct: 274 -----DEMPQ------------------------------RNEVSWSAMIARYCQSGYPE 298

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            ++  F  MI+   + +   F   L+A+A  + L  G  IHG   K GF   V V +SLI
Sbjct: 299 ESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLI 358

Query: 375 NMYSKMGCVCGLRTD-QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TAL 432
           +MY    C CG   D +F   ++L                            + VS  A+
Sbjct: 359 DMY----CKCGETKDGRFLFDTILEK--------------------------NMVSWNAM 388

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +  Y  NG M EA+YLF      +  +W+A+I G++      +  E+F+ M   GE  ++
Sbjct: 389 VGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNK 448

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T ++ + AC     L +GK +H   +K G + D  V + + DMY K G +  ++ +FN 
Sbjct: 449 STFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNR 508

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQ 611
           +P  ++V+WT MI G  ++G  + +L+++ +M + S + P+E  F  ++ A S    +++
Sbjct: 509 MPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDK 568

Query: 612 GRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLV 667
           G     ++     L      F  +  VDM ++ G + +A      M  +  T  W A+L 
Sbjct: 569 GLWYFNSMEAVYGLKPKGRHFTCV--VDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLS 626

Query: 668 GLAQHGNGE 676
           G   + N E
Sbjct: 627 GCKTYKNEE 635



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 215/554 (38%), Gaps = 139/554 (25%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   +  D  LG S    I+ +    D  ++N+L+T+  R G +  AR +FD+M ++
Sbjct: 189 SVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEK 248

Query: 118 DLISWNSILAAYAHSGE-GNAENV-------------------------TEGFRLF-RSL 150
           D++SW +IL  Y    E G A  +                          E  RLF R +
Sbjct: 249 DVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMI 308

Query: 151 RESITFTSRLT-LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +E   F   ++  + +L    S   + A   +HG+  KIG   D FVS +L+++Y K G+
Sbjct: 309 QEG--FKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGE 366

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
            ++ +FLFD + E+++V W  M+  Y+ NG  EE  +LF                     
Sbjct: 367 TKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLF--------------------- 405

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                             ++   NN   V W+  ++G+L         E F  MI     
Sbjct: 406 -----------------NIMPVRNN---VSWSAIIAGHLDCEQFDEMFEVFNEMILLGEI 445

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            +  TF   L A A T +L+ G+ +HG  +K G      VG +L +MY+K G        
Sbjct: 446 PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSG-------- 497

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                            +  SK++     K + V+     TA+I     +G   E+  LF
Sbjct: 498 ----------------DIESSKKVFNRMPKKNEVS----WTAMIQGLAESGLAEESLTLF 537

Query: 450 ENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATAVKACGC 504
           E  +       N ++F  +L   SH     K L  F+ M                     
Sbjct: 538 EEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEA------------------- 578

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
                       Y +K       CV    +DM  + G + +A+     +P  P+  AW  
Sbjct: 579 -----------VYGLKPKGRHFTCV----VDMLSRAGRLFEAEEFIYSMPFQPETNAWAA 623

Query: 564 MISGCVDNGEEDLA 577
           ++SGC     E+LA
Sbjct: 624 LLSGCKTYKNEELA 637



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 23/205 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S+L    ST+ L  GK+ H +I+      D ++   L  MY++ G +  ++++F
Sbjct: 447 NKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVF 506

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCL 170
           ++MP ++ +SW +++   A SG        E   LF  + ++ +   + +    +L  C 
Sbjct: 507 NRMPKKNEVSWTAMIQGLAESGLAE-----ESLTLFEEMEKTSSIAPNEVMFLAVLFACS 561

Query: 171 SSGYV----W---ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQE 222
            SG V    W   + E V+G   K       F    +V++ S+ G++ EA +F++    +
Sbjct: 562 HSGLVDKGLWYFNSMEAVYGLKPK----GRHFT--CVVDMLSRAGRLFEAEEFIYSMPFQ 615

Query: 223 RDVVLWKVML---RAYAENGFGEEV 244
            +   W  +L   + Y      E V
Sbjct: 616 PETNAWAALLSGCKTYKNEELAERV 640


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 309/585 (52%), Gaps = 46/585 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLG 351
           N  ++ LWN  ++   +       +E F  ++    ++ D+ T+   L A +G   +  G
Sbjct: 66  NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------------MGC---- 382
           + +H   +KSGF   V+V +S + MY+K                         + C    
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185

Query: 383 --------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                         V G + D  TL +V+ + + L + L   K+IH+  +++    D FV
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD-LERGKEIHMELVRSGFALDGFV 244

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S+AL+D+Y + G +  A+ +FE     ++ +WN+MI GY L  +S   +ELF  M   G 
Sbjct: 245 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 304

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           R    T+++ + AC   + L+ GK +H Y +++  E D+ V+S ++D+Y KCG +  A++
Sbjct: 305 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 364

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F ++P  + V+W  MISG V  G    AL I+  MR +GV PD  TF  ++ A S L  
Sbjct: 365 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 424

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE+G++IH  +I+     +  V  +L+DMYAKCG +++A  +F Q+  R+ V W +M+  
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 484

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG   E LKLFE M+    +PD VTF+ +LSACS+ GLV E    F+ M  +YG +P
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 544

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEK 787
            VEHYS L+D LGR GR +EA E++   P       +   L  AC +    + G+ +   
Sbjct: 545 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 604

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L+  +P D S Y++LSN++A+  +WD+V   R ++K   +KK+P 
Sbjct: 605 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPG 649



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 162/657 (24%), Positives = 273/657 (41%), Gaps = 92/657 (14%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           +++  S+L+  I +  L  GK  H +I++     +  L  +L+ +Y  C     A+ +F 
Sbjct: 3   TTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQ 62

Query: 113 KMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCL 170
            + +  D+  WN ++AA   +         EG  +F R L          T   +LK C 
Sbjct: 63  TIENPLDITLWNGLMAACTKNF-----IFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACS 117

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
             G V   + VH + +K G   D  V  + V +Y+K     +A  LFD M ERDV  W  
Sbjct: 118 GLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNN 177

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA- 283
           ++  Y ++G  E+   LF ++  SG  PD  ++  V+   + L     GK  H E V++ 
Sbjct: 178 VISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSG 237

Query: 284 ----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
                                  A ++       NVV WN  ++GY   GD+   IE F 
Sbjct: 238 FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFR 297

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M    ++    T    L A + + NL LG+ IHG  +++   + + V +SLI++Y K G
Sbjct: 298 RMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357

Query: 382 CV-------------------------------------------CGLRTDQFTLASVLR 398
            +                                            G++ D  T  SVL 
Sbjct: 358 NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLP 417

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A S L   L   K+IH   I++    +  V  AL+D+Y + G++ EA ++F      D  
Sbjct: 418 ACSQLAV-LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 476

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM 514
           +W +MI  Y     + +AL+LF  M  S  + D++T    + AC    ++ +G     QM
Sbjct: 477 SWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 536

Query: 515 HA-YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVA-WTTMISGCVDN 571
            A Y  K   E   C    ++D+  + G + +A  I    P   +DV   +T+ S C  +
Sbjct: 537 IAEYGFKPAVEHYSC----LIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLH 592

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
            + DL   I  ++ +     D  T+ IL    + +   ++ R++   + +L    +P
Sbjct: 593 KKLDLGEQI-GRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNP 648



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 149/294 (50%), Gaps = 6/294 (2%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   + + +K C     LKQGK +H   +  G + ++ +   ++++Y  C     A+ +
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 550 FNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPDEFTFAILVKASSCLT 607
           F  I  P D+  W  +++ C  N      L ++H+ +    + PD FT+  ++KA S L 
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            +  G+ +H ++IK   + D  V  S V MYAKC   EDA  LF +M  R+   WN ++ 
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGI 726
              Q G  E+ L+LFE+MK  G +PDSVT   V+S+C+    +    E +  L+R  + +
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +  V   S LVD  G+ G  + A E+   +  +   S +  + G   ++GD+++
Sbjct: 241 DGFVS--SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGY-SLKGDSKS 291



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 37/380 (9%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P  +L L   ++ S F   S +    +++       DL  GK  H  ++ S    D F++
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLT--TVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           + L+ MY +CG L  A+ +F+++  ++++SWNS++A Y+  G+  +        LFR + 
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS-----CIELFRRMD 300

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E     +  TL+ +L  C  S  +   + +HGY ++  +  D FV+ +L+++Y K G I 
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 360

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A+ +F  M + +VV W VM+  Y + G   E   +F D+ ++G+ PD  +   VL   S
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420

Query: 272 DLGKRHE-EQVQAYAIK--------------------------LLLYNN--NSNVVLWNK 302
            L    + +++  + I+                          L ++N     + V W  
Sbjct: 421 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTS 480

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL-KS 361
            ++ Y   G    A++ F  M +S+ + D VTFL  L+A +    ++ G       + + 
Sbjct: 481 MIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY 540

Query: 362 GFYSAVIVGNSLINMYSKMG 381
           GF  AV   + LI++  ++G
Sbjct: 541 GFKPAVEHYSCLIDLLGRVG 560



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 24/250 (9%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  + S+  +L+ F           +  + S+L      + L  GK  H  I+ S    +
Sbjct: 384 YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEIN 443

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             +   L+ MY++CG++  A  +F+++P+RD +SW S++AAY   G+       E  +LF
Sbjct: 444 EVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA-----FEALKLF 498

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETVHGYALKIGLVWDEFVSGALVN 202
             +++S     ++T   +L  C  +G V     + ++ +  Y  K  +   E  S  L++
Sbjct: 499 EKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV---EHYS-CLID 554

Query: 203 IYSKFGKIREAKFLFDGMQE--RDVVLWKVMLRA---YAENGFGEEVFHLFVDLHRSGLC 257
           +  + G++REA  +     +   DV L   +  A   + +   GE++  L ++       
Sbjct: 555 LLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKD----- 609

Query: 258 PDDESVQCVL 267
           PDD S   +L
Sbjct: 610 PDDPSTYIIL 619


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 197/580 (33%), Positives = 305/580 (52%), Gaps = 48/580 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  D +T +++ +A S +       K   +  +    V+D FV+T ++D+Y + G M +
Sbjct: 96  GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKD 155

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A ++F+     D+  + A+I GY       +ALE+F  M  S  + +E T+A+ + +CG 
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGN 215

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  GK +H   +KSG E  +   + +L MY KC  + D+  +FN +     V WT+ 
Sbjct: 216 LGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSF 275

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G V NG E++ALS++ +M    + P+ FTF+ ++ A S L  LE G QIHA  +KL  
Sbjct: 276 IVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGV 335

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + +V  +L+ +Y KCGN+E A  +F+ +   + V  N M+   AQ+G G E L+LFE 
Sbjct: 336 DGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFER 395

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           MK  G +P+ VTFI +L AC+  GLV E  + F L+R  + IE   +HY+ ++D LGRA 
Sbjct: 396 MKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAK 455

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R +EA  LI            R LL AC++ G+ E  +   +K++   P D   ++LL+N
Sbjct: 456 RFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTN 514

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA----------------DL-------IFAKVEG 841
           I+A+A +WD+V   +   +   +KK PA                DL       I   +  
Sbjct: 515 IYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHE 574

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV--------- 892
           LI+++   GY PDT FVL D+EEE+K  ALYYHSEKLA A+ L  T   +          
Sbjct: 575 LIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLR 634

Query: 893 -------------ILSNKEPLY--ANRFHHLRDGMCPCAD 917
                        +L+ ++ +   A RFHH + G+C C D
Sbjct: 635 VCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKD 674



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 3/347 (0%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H H +K+ ++  SF    LID Y +   + EA  LF+      + TWN+MI  ++  
Sbjct: 21  KSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCV 529
             + +A+EL+ +M   G   D  T +   KA   + + ++G++ H  A+  GFE+ D  V
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           ++GI+DMY K G M DA+ +F+ +   D V +T +I G    G +  AL ++  M  S +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+E+T A ++ +   L  L  G+ IH  ++K    S      SL+ MY+KC  +ED+  
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIK 259

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F  +   + V W + +VGL Q+G  E  L +F +M    + P+  TF  +L ACS   +
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAM 319

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           + EA E  H +  K G++      + L+   G+ G  ++A  +  S+
Sbjct: 320 L-EAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESL 365



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 230/543 (42%), Gaps = 96/543 (17%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           KS H  IL S  +   F  + L+  Y +C  +  AR+LFD+MP+R +++WNS+++++   
Sbjct: 21  KSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL-V 191
           G+       E   L+ ++          T + + K     G     +  HG A+ +G  V
Sbjct: 80  GK-----TKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEV 134

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV+  +V++Y+KFGK+++A+F+FD + ++DVVL+  ++  Y + G   E   +F D+
Sbjct: 135 SDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDM 194

Query: 252 HRSGLCPDDESVQCVLGVISDLG-------------KRHEEQVQAYAIKLLLYNNNSNV- 297
             S + P++ ++  VL    +LG             K   E V A    LL   +  N+ 
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMV 254

Query: 298 ---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                          V W   + G +Q G    A+  F  MIR ++  +  TF   L A 
Sbjct: 255 EDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHAC 314

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           +    L  G+QIH  T+K G      V  +LI++Y K G V   R       SV  + + 
Sbjct: 315 SSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR-------SVFESLTE 367

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L                     D      +I  Y +NG                      
Sbjct: 368 L---------------------DVVSINTMIYAYAQNG---------------------- 384

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS- 521
             FG       H+ALELF  M   G + + +T  + + AC    ++++G Q+ +    + 
Sbjct: 385 --FG-------HEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNH 435

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
             EL     + ++D+  +     +A  +  +   PD + W T+++ C  +GE ++A    
Sbjct: 436 SIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFM 495

Query: 582 HQM 584
            +M
Sbjct: 496 KKM 498



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 137/260 (52%), Gaps = 3/260 (1%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           K +H + +KSG  L       ++D Y+KC  + +A+ +F+++P    V W +MIS  V  
Sbjct: 21  KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS-SDPFV 630
           G+   A+ +Y  M   GV+PD +TF+ + KA S +    +G++ H   + L    SD FV
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
              +VDMYAK G ++DA  +F ++  ++ VL+ A++VG  Q G   E L++FEDM    +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +P+  T   VL +C   G +    +  H +  K G+E  V   + L+    +    +++ 
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNG-KLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSI 258

Query: 751 ELILSMPFEASASMHRALLG 770
           ++  S+ + +  +    ++G
Sbjct: 259 KVFNSLAYASHVTWTSFIVG 278



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 9/238 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    +  DL+ GK  H  ++ S          +L+TMYS+C  +  + ++F+ +   
Sbjct: 208 SVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYA 267

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W S +     +G    E +     +FR +       +  T + +L  C S   + A
Sbjct: 268 SHVTWTSFIVGLVQNGR---EEI--ALSMFREMIRCSISPNHFTFSSILHACSSLAMLEA 322

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H   +K+G+  +++V  AL+++Y K G + +A+ +F+ + E DVV    M+ AYA+
Sbjct: 323 GEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQ 382

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
           NGFG E   LF  + + G  P+  +   +L   ++ G   EE  Q ++   L+ NN+S
Sbjct: 383 NGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLV-EEGCQIFS---LIRNNHS 436



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FS + HA S+  +L  G+  HA  +      ++++   L+ +Y +CG++  AR +F+ + 
Sbjct: 307 FSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           + D++S N+++ AYA +G G+     E   LF  +++     + +T   +L  C ++G V
Sbjct: 367 ELDVVSINTMIYAYAQNGFGH-----EALELFERMKKLGHKPNVVTFISILLACNNAGLV 421

Query: 176 WASETVHGYAL-----KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
              E    ++L      I L  D +    ++++  +  +  EA  L +  +  DV+ W+ 
Sbjct: 422 --EEGCQIFSLIRNNHSIELTRDHYT--CMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRT 477

Query: 231 MLRAYAENG 239
           +L A   +G
Sbjct: 478 LLNACKIHG 486


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 188/574 (32%), Positives = 306/574 (53%), Gaps = 46/574 (8%)

Query: 390  QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
              T+   L+++S LP  L   +Q+H  ++K  +  +  V T+L+ +Y + G +  A+ +F
Sbjct: 549  HLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVF 608

Query: 450  ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
            +         W A+I  Y+ + +  +A+ +  +   +G R D  T    + AC  +  L 
Sbjct: 609  DEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLA 668

Query: 510  QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
             G+ +   A + G    + V++  +D+YVKCG M  A+ +F+ +   D VAW  M+ G  
Sbjct: 669  TGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYA 728

Query: 570  DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
             NG    AL ++  M+  G+ PD +  A  + A + L AL+ GRQ    +   +   +P 
Sbjct: 729  SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 788

Query: 630  VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
            +G +L+DMYAKCG+  +A+++F+QM  ++ ++WNAM++GL   G+ +    L   M+  G
Sbjct: 789  LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 848

Query: 690  VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            V+ +  TFIG+L +C++TGL+ +    FH M + Y I P +EHY  +VD L RAG  +EA
Sbjct: 849  VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 908

Query: 750  GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
             +L+  MP  A+A +  ALLG C++  +TE  + V ++L+ LEP++S  YV+LSNI++  
Sbjct: 909  HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 968

Query: 810  NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
             +W+D    R +MK K V+K PA                       D I+ K++ L   +
Sbjct: 969  GRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 1028

Query: 847  KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
            K  GY P T+ V+ DVE+EEKE  L +HSEKLA A+ L+ T P   I             
Sbjct: 1029 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH 1088

Query: 894  --------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                    ++++E +    NRFH  RDG C C D
Sbjct: 1089 TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 1122



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 179/417 (42%), Gaps = 41/417 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  HAR L      +  +  +L+++Y++CG L  A+R+FD+MP    + W +++ A
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +G+     + E   + R+   +       T   +L  C     +   ETV   A + 
Sbjct: 626 YMDAGD-----LREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 680

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+    FV+ A V++Y K G++ +A+ +FD M+ +D V W  M+  YA NG   E   LF
Sbjct: 681 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 740

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNVVLWNKKLSGY 307
           + +   G+ PD  +V   L   + LG      +   AI+++ ++    N VL    +  Y
Sbjct: 741 LAMQAEGMKPDCYAVAGALSACTRLGAL---DLGRQAIRMVDWDEFLDNPVLGTALIDMY 797

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            + G    A   F  M + ++    + +   +  +  T +  +   + G   KSG     
Sbjct: 798 AKCGSTVEAWVVFQQMRKKDI----IVWNAMILGLGMTGHEKIAFALVGQMEKSGVK--- 850

Query: 368 IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +  N+ I +     C C   T    +    R   ++ +  H+S +I  +           
Sbjct: 851 LNDNTFIGLL----CSC---THTGLIQDGRRYFHNMTKLYHISPRIEHYG---------- 893

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHM 483
               ++D+  R G + EA  L ++         NA+I G +L     H+  EL  H+
Sbjct: 894 ---CMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGGCKIHRNTELAEHV 943


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  335 bits (859), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 196/579 (33%), Positives = 312/579 (53%), Gaps = 54/579 (9%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           DQ  + S+L+ S  + + L     IH   I+N    D F+   L+    +  ++  A  +
Sbjct: 31  DQKQIISLLQRSKHINQVL----PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 86

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     ++  + A+I G++ S N   A++L+S M       D   +A+ +KACG  L L
Sbjct: 87  FQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLAL 146

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP----APDDVAWTTM 564
           ++G+++H+ A+K G   +  V   I+++Y KCG + DA+ +F ++P    A D V WT M
Sbjct: 147 REGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 206

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G V N E + AL  +  M+   V P+EFT   ++ A S L ALE GR +H+ + K + 
Sbjct: 207 IDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 266

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + FVG +L++MY++CG+I++A  +F +M  R+ + +N M+ GL+ +G   + ++LF  
Sbjct: 267 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 326

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M    + P +VTF+GVL+ACS+ GLV   ++ FH M   YG+EP++EHY  +VD LGR G
Sbjct: 327 MIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVG 386

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R +EA +LI +M       M   LL AC++  + E G+ VA+ L      DS  YVLLS+
Sbjct: 387 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSH 446

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           ++A++ +W +    R +MK   ++K+P                        + I+ K+E 
Sbjct: 447 VYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEE 506

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--LSNKEP 899
           L + ++  GY P+ + VL D+E+ EKE AL  HSE+LA  YGLIST P +VI  + N   
Sbjct: 507 LNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRV 566

Query: 900 LY---------------------ANRFHHLRDGMCPCAD 917
            Y                      NRFH+  +G C C D
Sbjct: 567 CYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGD 605



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 137/308 (44%), Gaps = 27/308 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           SIL+   S   L  G+  H+R L      +R +   +M +Y +CG L  ARR+F++MP+ 
Sbjct: 135 SILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 194

Query: 117 ---RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
              +D + W +++  +  + E N          FR ++      +  T+  +L  C   G
Sbjct: 195 VVAKDTVCWTAMIDGFVRNEEMN-----RALEAFRGMQGENVRPNEFTIVCVLSACSQLG 249

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     VH Y  K  +  + FV  AL+N+YS+ G I EA+ +FD M++RDV+ +  M+ 
Sbjct: 250 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 309

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLG-KRHEEQVQAYAIK 287
             + NG   +   LF  +    L P + +       C  G + D G K      + Y ++
Sbjct: 310 GLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVE 369

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTD 346
             + +    V L  +            G +E   ++IR+  +  D +     L+A     
Sbjct: 370 PQIEHYGCMVDLLGRV-----------GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHK 418

Query: 347 NLNLGQQI 354
           NL LG+Q+
Sbjct: 419 NLELGEQV 426



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 161/394 (40%), Gaps = 51/394 (12%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA ++  Y +N NV L+   + G++  G+   AI+ +  M+  ++  D+      L A  
Sbjct: 82  YASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACG 141

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG--------------------CV 383
               L  G+++H   LK G  S  +V   ++ +Y K G                     V
Sbjct: 142 SQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTV 201

Query: 384 C---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           C                            +R ++FT+  VL A S L   L + + +H +
Sbjct: 202 CWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG-ALEIGRWVHSY 260

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             K +   + FV  ALI++Y R GS+ EA+ +F+     D+ T+N MI G  ++  S +A
Sbjct: 261 MRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQA 320

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILD 535
           +ELF  M     R   +T    + AC    ++  G K  H+     G E  +     ++D
Sbjct: 321 IELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVD 380

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           +  + G + +A  +   +   PD +   T++S C  +   +L   +   +   G   D  
Sbjct: 381 LLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQA-DSG 439

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           T+ +L    +     ++  Q+ A + +     +P
Sbjct: 440 TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 473



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 198/462 (42%), Gaps = 66/462 (14%)

Query: 39  LPFL---QKSHFSSSSS--------SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           LPF     K H +S+S+          Q  S+L+ +   + +L     HA+++ +    D
Sbjct: 7   LPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVL---PIHAQLIRNGHSQD 63

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F+   L+   S+C ++ YA R+F    + ++  + +++  +  SG     N  +  +L+
Sbjct: 64  PFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG-----NYFDAIQLY 118

Query: 148 -RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
            R L +SI   + L +A +LK C S   +     VH  ALK+GL  +  V   ++ +Y K
Sbjct: 119 SRMLHDSILPDNYL-MASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGK 177

Query: 207 FGKIREAKFLFDGMQE----RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            G++ +A+ +F+ M E    +D V W  M+  +  N         F  +    + P++ +
Sbjct: 178 CGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFT 237

Query: 263 VQCVLGVISDLGKRH-----EEQVQAYAIKLLLYNNNS---------------------- 295
           + CVL   S LG           ++ + I+L L+  N+                      
Sbjct: 238 IVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK 297

Query: 296 --NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             +V+ +N  +SG    G +  AIE F  MI   ++  +VTF+  L A +    ++ G +
Sbjct: 298 DRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFK 357

Query: 354 I-HGTTLKSGFYSAVIVGNSLINMYSKMGCV---------CGLRTDQFTLASVLRASSSL 403
           I H  T   G    +     ++++  ++G +           +  D   L ++L A   +
Sbjct: 358 IFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA-CKM 416

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            + L L +Q+    +++   ADS     L  VY  +G   EA
Sbjct: 417 HKNLELGEQV-AKVLEDRGQADSGTYVLLSHVYASSGKWKEA 457


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 221/690 (32%), Positives = 347/690 (50%), Gaps = 99/690 (14%)

Query: 322 NMIRSNVQYD--SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY-S 378
           +M+R+ + +D  S T L    A++   +L+   ++     +   Y+     N+LI  + S
Sbjct: 52  HMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYT----WNTLIRAFAS 107

Query: 379 KMGCVCGLRT------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
               + GL              + +T   V++A++ +   L   + IH   +K    +D 
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV-SSLLAGQAIHGMVMKASFGSDL 166

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F+S +LI  Y   G +  A  +F      D+ +WN+MI G++   +  +AL+LF  M   
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
             R + +T+   + AC   + L+ G+    Y  ++G +++L +S+ +LDMYVKCG++ DA
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDA 286

Query: 547 QSIFNDIPAPDDVAWTTMISGCV-------------------------------DNGEED 575
           + +F+ +   D V+WTTMI G                                  NG+  
Sbjct: 287 RRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPK 346

Query: 576 LALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
            AL+I+ +++L+    P+E T A  + A + L A++ G  IH  + K     +  +  SL
Sbjct: 347 EALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSL 406

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +DMY+KCG++E A  +F  ++ R+  +W+AM+ GLA HG+G   + LF  M+   V+P++
Sbjct: 407 IDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNA 466

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           VTF  +L ACS++GLV E    F+ MR  YG+ P  +HY+ +VD LGRAG  +EA ELI 
Sbjct: 467 VTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIE 526

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            MP   SAS+  ALLGACR+ G+ E  +    +L+  +  +  AYVLLSNI+A A +WD 
Sbjct: 527 KMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDC 586

Query: 815 VTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGY 851
           V+  R  MK   ++K+P                       +  I++K++ ++ RIK  GY
Sbjct: 587 VSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGY 646

Query: 852 VPDTDFVLLDVEEE-EKERALYYHSEKLARAYGLISTPPSSVI----------------- 893
           V D   +L  VEEE  KE AL  HSEKLA AYGLI   PS  I                 
Sbjct: 647 VSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAK 706

Query: 894 ----LSNKEPLYAN--RFHHLRDGMCPCAD 917
               L N++ L  +  RFHH   G C C D
Sbjct: 707 LISKLYNRDILLRDRYRFHHFSGGNCSCMD 736



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 236/528 (44%), Gaps = 44/528 (8%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA +L +    D      L T    S   SL YA ++FD++P  +L +WN+++ A+A
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106

Query: 131 HSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            S +       +G  +F + L ES  F +  T   ++K       + A + +HG  +K  
Sbjct: 107 SSPKP-----IQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKAS 161

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D F+S +L++ YS  G +  A  +F  + E+D+V W  M+  + + G  EE   LF 
Sbjct: 162 FGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLWNKKLSGYL 308
            +      P+  +   ++GV+S   KR + +   +A   +  N  + N++L N  L  Y+
Sbjct: 222 RMKMENARPNRVT---MVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYV 278

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G    A   F  M     + D V++   +   A   + +  +++     +      + 
Sbjct: 279 KCGSLEDARRLFDKM----EEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRED----IT 330

Query: 369 VGNSLINMYSKMG-------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
             N+LI+ Y + G                  + ++ TLAS L A + L   + L   IHV
Sbjct: 331 AWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQL-GAMDLGGWIHV 389

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           +  K     +  ++T+LID+Y + G + +A  +F + +  D+  W+AMI G  +  +   
Sbjct: 390 YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRA 449

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK----QMH-AYAMKSGFELDLCVS 530
           A++LFS M  +  + + +T    + AC    ++ +G+    QM   Y +  G +   C  
Sbjct: 450 AIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYAC-- 507

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             ++D+  + G + +A  +   +P  P    W  ++  C   G  +LA
Sbjct: 508 --MVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 172/382 (45%), Gaps = 38/382 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY---LFENKDGFDLATWNAMIFGY 467
           KQ+H H ++     D   +T L    C   S +  +Y   +F+     +L TWN +I  +
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTA-CALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAF 105

Query: 468 ILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
             S    + L +F  M H S    +  T    +KA   +  L  G+ +H   MK+ F  D
Sbjct: 106 ASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSD 165

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
           L +S+ ++  Y   G +  A  +F+ I   D V+W +MISG V  G  + AL ++ +M++
Sbjct: 166 LFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKM 225

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
               P+  T   ++ A +    LE GR     + +     +  +  +++DMY KCG++ED
Sbjct: 226 ENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLED 285

Query: 647 AYILFKQMDMRNTVLWNAMLVGLA-------------------------------QHGNG 675
           A  LF +M+ ++ V W  M+ G A                               Q+G  
Sbjct: 286 ARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKP 345

Query: 676 EETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           +E L +F +++ +   +P+ VT    L+AC+  G + +     H+  +K GI+      +
Sbjct: 346 KEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAM-DLGGWIHVYIKKQGIKLNFHITT 404

Query: 735 FLVDALGRAGRTKEAGELILSM 756
            L+D   + G  ++A E+  S+
Sbjct: 405 SLIDMYSKCGHLEKALEVFYSV 426



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 9/203 (4%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG-----AMVDAQSIFNDIPAPDDVAWTT 563
           K  KQ+HA+ +++G   D         ++  C      ++  A  +F+ IP P+   W T
Sbjct: 44  KHLKQLHAHMLRTGLFFD---PPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNT 100

Query: 564 MISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +I     + +    L ++ QM   S   P+ +TF  ++KA++ +++L  G+ IH  ++K 
Sbjct: 101 LIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKA 160

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              SD F+  SL+  Y+  G+++ AY++F ++  ++ V WN+M+ G  Q G+ EE L+LF
Sbjct: 161 SFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLF 220

Query: 683 EDMKAHGVEPDSVTFIGVLSACS 705
           + MK     P+ VT +GVLSAC+
Sbjct: 221 KRMKMENARPNRVTMVGVLSACA 243


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 316/612 (51%), Gaps = 64/612 (10%)

Query: 364 YSAVIVGNSLIN-------MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           ++A+I G S  N       MYSKM  +  +  D FT   +L+A   L   L + + +H  
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSKMQ-LARVSPDSFTFPHLLKACGGLSH-LQMGRFVHAQ 144

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL-----ATWNAMIFGYILSN 471
             +    AD FV   LI +Y +   +  A  +FE   G  L      +W A++  Y  + 
Sbjct: 145 VFRLGFEADVFVQNGLIALYAKCRRLGCARTVFE---GLPLPERTIVSWTAIVSAYAQNG 201

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +ALE+FS M     + D + + + + A  CL  L+QG+ +HA  MK G E +  +  
Sbjct: 202 EPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLI 261

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            +  MY KCG +  A+ +F+ + +P+ + W  MISG   NG    A+ ++H+M    V P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP 321

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D  +    + A + + +LEQ R +   + + D   D F+  +L+DM+AKCG++E A  +F
Sbjct: 322 DTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF 381

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +   R+ V+W+AM+VG   HG   E + L+  M+  GV P+ VTF+G+L AC+++G+V 
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVR 441

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E +  F+ M + + I P+ +HY+ ++D LGRAG   +A E+I  MP +   ++  ALL A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           C+     E GK+ A++L +++P ++  YV LSN++AAA  WD V   R  MK K + KD 
Sbjct: 501 CKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                   + I  +VE +  R+KEGG+V + D  L D+ +EE E
Sbjct: 561 GCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620

Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
             L  HSE++  AYGLISTP  + +                     L  +E +    NRF
Sbjct: 621 ETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRF 680

Query: 906 HHLRDGMCPCAD 917
           HH +DG+C C D
Sbjct: 681 HHFKDGVCSCGD 692



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 198/368 (53%), Gaps = 10/368 (2%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+ +D F  AS++ +S+   +     +QIH   +        F+ T LI      G +  
Sbjct: 17  GIHSDSF-YASLIDSSTHKAQ----LRQIHARLLVLGLQFSGFLITKLIHASSSYGDITF 71

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F++     +  WNA+I GY  +N+   AL ++S M  +    D  T    +KACG 
Sbjct: 72  ARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGG 131

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWT 562
           L  L+ G+ +HA   + GFE D+ V +G++ +Y KC  +  A+++F  +P P+   V+WT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWT 191

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            ++S    NGE   AL I+ QMR   V PD      ++ A +CL  LEQGR IHA+++K+
Sbjct: 192 AIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM 251

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              ++P + ISL  MYAKCG +  A ILF +M   N +LWNAM+ G A++G  ++ + LF
Sbjct: 252 GLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLF 311

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSFLVDALG 741
            +M    V PD+++    +SAC+  G + +A + + ++ R  Y    +V   S L+D   
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDY--RDDVFISSALIDMFA 369

Query: 742 RAGRTKEA 749
           + G  + A
Sbjct: 370 KCGSVECA 377



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 197/450 (43%), Gaps = 47/450 (10%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
           PFL  +  S   S S + S++  +   + L   +  HAR+L        FL   L+   S
Sbjct: 10  PFLYTN--SGIHSDSFYASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHASS 64

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
             G + +AR++FD +P   +  WN+I+  Y+ +      +  +   ++  ++ +      
Sbjct: 65  SYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN-----NHFQDALLMYSKMQLARVSPDS 119

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T   LLK C    ++     VH    ++G   D FV   L+ +Y+K  ++  A+ +F+G
Sbjct: 120 FTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEG 179

Query: 220 MQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           +   ER +V W  ++ AYA+NG   E   +F  + +  + PD  ++  VL   + L    
Sbjct: 180 LPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLE 239

Query: 278 E-EQVQAYAIKL-------LLYNNNS---------------------NVVLWNKKLSGYL 308
           +   + A  +K+       LL + N+                     N++LWN  +SGY 
Sbjct: 240 QGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G    AI+ F  MI  +V+ D+++   A++A A   +L   + +     +S +   V 
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVF 359

Query: 369 VGNSLINMYSKMGCV-CGLRTDQFTLASVLRASSSLPEGLHLSKQIH-----VHAIKNDT 422
           + ++LI+M++K G V C       TL   +   S++  G  L  Q         A++ D 
Sbjct: 360 ISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDG 419

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           V  + V+   + + C +  M    + F N+
Sbjct: 420 VHPNDVTFLGLLIACNHSGMVREGWWFFNR 449



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 36/339 (10%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  +LL + +      S  S  +  +L+     S L +G+  HA++       D F+ N 
Sbjct: 100 FQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNG 159

Query: 94  LMTMYSRCGSLVYARRLFD--KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           L+ +Y++C  L  AR +F+   +P+R ++SW +I++AYA +GE       E   +F  +R
Sbjct: 160 LIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEP-----VEALEIFSQMR 214

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           +       + L  +L        +    ++H   +K+GL  +  +  +L  +Y+K G++ 
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVA 274

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            AK LFD M+  +++LW  M+  YA+NGF ++   LF ++    + PD  S+   +   +
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334

Query: 272 DLGKRHEEQVQAYAIKLLLYNN-----------------------------NSNVVLWNK 302
            +G   + +     +    Y +                             + +VV+W+ 
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSA 394

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
            + GY   G    AI  +  M R  V  + VTFL  L A
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIA 433


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  335 bits (858), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 212/703 (30%), Positives = 357/703 (50%), Gaps = 105/703 (14%)

Query: 309 QVGDNHGAIECFVNMIRSNVQYD--SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS- 365
           Q+   HG      +MIR+    D  S + L A+AA++   +L   +++     K   ++ 
Sbjct: 45  QLKQTHG------HMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98

Query: 366 ------------AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                        V+   + ++M S+  C      +++T   +++A++ +   L L + +
Sbjct: 99  NTLIRAYASGPDPVLSIWAFLDMVSESQCY----PNKYTFPFLIKAAAEV-SSLSLGQSL 153

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H  A+K+   +D FV+ +LI  Y   G +  A  +F      D+ +WN+MI G++   + 
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            KALELF  M +   +   +T+   + AC  +  L+ G+Q+ +Y  ++   ++L +++ +
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273

Query: 534 LDMYVKCGAMVDAQSIF-------------------------------NDIPAPDDVAWT 562
           LDMY KCG++ DA+ +F                               N +P  D VAW 
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIK 621
            +IS    NG+ + AL ++H+++L   +  ++ T    + A + + ALE GR IH+ + K
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                +  V  +L+ MY+KCG++E +  +F  ++ R+  +W+AM+ GLA HG G E + +
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M+   V+P+ VTF  V  ACS+TGLV EA   FH M   YGI PE +HY+ +VD LG
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           R+G  ++A + I +MP   S S+  ALLGAC++  +    +    +L+ LEP +  A+VL
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 573

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSNI+A   +W++V+  R  M+   +KK+P                       ++ ++ K
Sbjct: 574 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEE-KERALYYHSEKLARAYGLISTPPSSVI---- 893
           +  +++++K  GY P+   VL  +EEEE KE++L  HSEKLA  YGLIST    VI    
Sbjct: 634 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 693

Query: 894 -----------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                            L ++E +  +  RFHH R+G C C D
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/577 (22%), Positives = 251/577 (43%), Gaps = 44/577 (7%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           IFS+    +    P+FS    P       ++++  S+  S++   +S   L   K TH  
Sbjct: 3   IFSTAQPLSLPRHPNFSNPNQP-------TTNNERSRHISLIERCVSLRQL---KQTHGH 52

Query: 79  ILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           ++ +    D +  + L  M   S   SL YAR++FD++P  +  +WN+++ AYA      
Sbjct: 53  MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA----SG 108

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
            + V   +     + ES  + ++ T   L+K       +   +++HG A+K  +  D FV
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + +L++ Y   G +  A  +F  ++E+DVV W  M+  + + G  ++   LF  +    +
Sbjct: 169 ANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLWNKKLSGYLQVGDNHG 315
                S   ++GV+S   K    +        +  N  N N+ L N  L  Y + G    
Sbjct: 229 ---KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 285

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A   F  M     + D+VT+   L   A +++    +++    L S     ++  N+LI+
Sbjct: 286 AKRLFDAM----EEKDNVTWTTMLDGYAISEDYEAAREV----LNSMPQKDIVAWNALIS 337

Query: 376 MYSKMG-------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
            Y + G                 ++ +Q TL S L A + +   L L + IH +  K+  
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG-ALELGRWIHSYIKKHGI 396

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             +  V++ALI +Y + G + ++  +F + +  D+  W+AMI G  +    ++A+++F  
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCG 541
           M  +  + + +T      AC    ++ + + + H      G   +    + I+D+  + G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516

Query: 542 AMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLA 577
            +  A      +P P   + W  ++  C  +   +LA
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  335 bits (858), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 197/553 (35%), Positives = 297/553 (53%), Gaps = 47/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H   I        F+ T L+ +Y R G++ +A  + +      + +W  MI GY  +
Sbjct: 62  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT 121

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +AL+LF  M  +G   +E T+AT + +C     + QGKQ+H+  +K+ FE  + V 
Sbjct: 122 ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG 181

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K   + +A+ +F+ +P  D V+ T +ISG    G ++ AL ++ Q+   G+ 
Sbjct: 182 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQ 241

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  TF  LV A S L +L+ G+Q+HA +++ +      +  SL+DMY+KCG +  +  +
Sbjct: 242 CNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRV 301

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  R+ V WNAML+G  +HG G E + LF+D+    V+PDSVT + VLS CS+ GLV
Sbjct: 302 FDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLV 360

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F  + ++        HY  ++D LGR+GR ++A  LI +MPFE++ S+  +LLG
Sbjct: 361 DEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 420

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV  +   G+ VA+KL+ +EP ++  YV+LSNI+AAA  W DV   R  M  K V K+
Sbjct: 421 ACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKE 480

Query: 831 PADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                          I AK++ +   IK  G+VPD   VL DV++E+K
Sbjct: 481 PGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQK 540

Query: 868 ERALYYHSEKLARAYGLISTPPSSVILSNK---------------EPLY--------ANR 904
           ER L  HSEKLA  +GL++TPP   I   K                 +Y         NR
Sbjct: 541 ERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNR 600

Query: 905 FHHLRDGMCPCAD 917
           FH L  G C C D
Sbjct: 601 FHLLTHGNCTCGD 613



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 130/217 (59%), Gaps = 2/217 (0%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A+ AC     L +G+Q+HA  + + +   + + + ++ MYV+CGA+ DA+++ + +P   
Sbjct: 48  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+WTTMISG         AL ++ +M  +G +P+E+T A ++ + S   ++ QG+Q+H+
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 167

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L+K +  S  FVG SL+DMYAK  NI++A  +F  +  R+ V   A++ G AQ G  EE
Sbjct: 168 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 227

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
            L LF  + + G++ + VTF  +++A S  GL S  Y
Sbjct: 228 ALDLFRQLYSEGMQCNHVTFTTLVTALS--GLASLDY 262



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 42/356 (11%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           +S+   ++ + +   I    L  G+  HAR++ +   P  FL   L+TMY RCG+L  AR
Sbjct: 38  ASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDAR 97

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            + D+MP+R ++SW ++++ Y+ +     E   E   LF  +  +    +  TLA +L  
Sbjct: 98  NVLDRMPERSVVSWTTMISGYSQT-----ERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     ++  + VH   +K       FV  +L+++Y+K   I+EA+ +FD + ERDVV  
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
             ++  YA+ G  EE   LF  L+  G+  +  +   ++  +S L    + +QV A  ++
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 288 ---------------------LLLYNNN-------SNVVLWNKKLSGYLQVGDNHGAIEC 319
                                 LLY+          +VV WN  L GY + G  H  I  
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 332

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK-------SGFYSAVI 368
           F ++    V+ DSVT L  L+  +    ++ G  I  T +K       +G Y  +I
Sbjct: 333 FKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCII 387



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 191/423 (45%), Gaps = 58/423 (13%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+Q+H   + + +  AV +G  L+ MY + G +                           
Sbjct: 61  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 120

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G   +++TLA+VL  S S P+ ++  KQ+H   +K +  +  F
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVL-TSCSGPQSIYQGKQVHSLLVKTNFESHMF 179

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V ++L+D+Y ++ ++ EA  +F+     D+ +  A+I GY       +AL+LF  +++ G
Sbjct: 180 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 239

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + + +T  T V A   L  L  GKQ+HA  ++      + + + ++DMY KCG ++ ++
Sbjct: 240 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSR 299

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+++     V+W  M+ G   +G     +S++  +    V PD  T   ++   S   
Sbjct: 300 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGG 358

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
            +++G  I   ++K + S+    G    ++D+  + G +E A  L + M   +T  +W +
Sbjct: 359 LVDEGLDIFDTVVK-EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 417

Query: 665 MLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SYTGLVSEAYENFHLM 720
           +L     H N   GE   +   +M     EP++     +LS   +  G+  + ++   LM
Sbjct: 418 LLGACRVHANVHVGELVAQKLLEM-----EPENAGNYVILSNIYAAAGMWKDVFKVRKLM 472

Query: 721 REK 723
            EK
Sbjct: 473 LEK 475



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 47/318 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV W   +SGY Q   +  A++ F+ M+R+    +  T    L + +G  ++  G+Q+H
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK-------------------MGCVC------------ 384
              +K+ F S + VG+SL++MY+K                   + C              
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ +  T  +++ A S L   L   KQ+H   ++ +      +  +L
Sbjct: 227 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLA-SLDYGKQVHALILRKELPFFVALQNSL 285

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G +  +  +F+N     + +WNAM+ GY      H+ + LF  +H    + D 
Sbjct: 286 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDS 344

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG-ILDMYVKCGAMVDAQSIFN 551
           +T+   +  C    ++ +G  +    +K    L      G I+D+  + G +  A ++  
Sbjct: 345 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIE 404

Query: 552 DIPAPDDVA-WTTMISGC 568
           ++P     + W +++  C
Sbjct: 405 NMPFESTPSIWGSLLGAC 422


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  335 bits (858), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 200/581 (34%), Positives = 295/581 (50%), Gaps = 49/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  + FT   V +A +SL   +   KQIH  A+K   + D FV  +  D+YC+     +
Sbjct: 103 GVAPNDFTFPCVFKAVASLRLPV-TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     +L TWNA I   +      +A+E F      G + + IT    + AC  
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            L+L  G QMH    +SGF+ D+ V +G++D Y KC  +  ++ IF ++   + V+W ++
Sbjct: 222 GLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSL 281

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ++  V N E++ A  +Y + R   V   +F  + ++ A + +  LE GR IHA+ +K   
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
             + FVG +LVDMY KCG IED+   F +M  +N V  N+++ G A  G  +  L LFED
Sbjct: 342 ERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFED 401

Query: 685 MKAHGV--EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           M   G    P+ +TF+ +LSACS  G V    + F  M+  YGIEP  EHYS +VD LGR
Sbjct: 402 MAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGR 461

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  ++A E I  MP + + S+  AL  ACR+ G    G   AE L  L+P DS  +VLL
Sbjct: 462 AGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLL 521

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVK-------------------KDPADLIFAKVEGLI 843
           SN FAAA +W +  + R EMK   +K                   KD +  +  +++ ++
Sbjct: 522 SNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTML 581

Query: 844 KRIKE----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEP 899
            +++      GY PD    L D+EEEEK   + +HSEKLA A+GL++ P S  I   K  
Sbjct: 582 TKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNL 641

Query: 900 LYA-----------------------NRFHHLRDGMCPCAD 917
                                     NRFH  +DG+C C D
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 169/377 (44%), Gaps = 9/377 (2%)

Query: 407 LHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
           + L + +H   +K  D+    F++  LI++Y +      A  +       ++ +W +++ 
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVS 81

Query: 466 GYILSNNSHKALELFS--HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           G  L+ N H +  LF    M   G   ++ T     KA   L +   GKQ+HA A+K G 
Sbjct: 82  G--LAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGR 139

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            LD+ V     DMY K     DA+ +F++IP  +   W   IS  V +G    A+  + +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIE 199

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            R  G  P+  TF   + A S    L+ G Q+H  + +    +D  V   L+D Y KC  
Sbjct: 200 FRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQ 259

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           I  + I+F +M M+N V W +++    Q+   E+   L+   +   VE        VLSA
Sbjct: 260 IRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSA 319

Query: 704 CS-YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           C+   GL  E   + H    K  +E  +   S LVD  G+ G  +++ +    MP E + 
Sbjct: 320 CAGMAGL--ELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNL 376

Query: 763 SMHRALLGACRVQGDTE 779
               +L+G    QG  +
Sbjct: 377 VTLNSLIGGYAHQGQVD 393



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 157/355 (44%), Gaps = 35/355 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +L++AISTS + LG+  HARI+ +    P  FL N L+ MYS+      AR +    P R
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW S+++  A +G  +    T  F  F   RE +   +  T   + K   S      
Sbjct: 72  NVVSWTSLVSGLAQNGHFS----TALFEFFEMRREGVA-PNDFTFPCVFKAVASLRLPVT 126

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  A+K G + D FV  +  ++Y K     +A+ LFD + ER++  W   +     
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVT 186

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKRHEEQV--QAYAIKLLL 290
           +G  +E    F++  R G  P+  +       C  G++ DLG +    V    +   + +
Sbjct: 187 DGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSV 246

Query: 291 YNN----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           YN                         N V W   ++ Y+Q  ++  A   ++   +  V
Sbjct: 247 YNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIV 306

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +         L+A AG   L LG+ IH   +K+     + VG++L++MY K GC+
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCI 361



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG   H  +  S    D  + N L+  Y +C  +  +  +F +M  ++ +SW S++AA
Sbjct: 225 LDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAA 284

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  + E    +V     L+   R+ I  TS   ++ +L  C     +    ++H +A+K 
Sbjct: 285 YVQNHEDEKASV-----LYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            +  + FV  ALV++Y K G I +++  FD M E+++V    ++  YA  G  +    LF
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALF 399

Query: 249 VDLHRSGLCP 258
            D+   G  P
Sbjct: 400 EDMAPRGCGP 409



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 7/120 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      + L LG+S HA  + +    + F+ + L+ MY +CG +  + + FD+MP++
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSGYV 175
           +L++ NS++  YAH G+     V     LF  +  R      + +T   LL  C  +G V
Sbjct: 375 NLVTLNSLIGGYAHQGQ-----VDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAV 429


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 210/710 (29%), Positives = 342/710 (48%), Gaps = 91/710 (12%)

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           S+V +W   +SGY + GD    +  F  M    V+ D+ T    L  +AG  ++  G+ +
Sbjct: 159 SDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVV 218

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKM--------------------------GCVC---- 384
           HG   K GF S   VGN+L+  Y+K                           GC      
Sbjct: 219 HGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLY 278

Query: 385 -------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                        G   D  TL SVL A + L   L L + +H +++K   ++ + ++  
Sbjct: 279 DKAIELFVRMWLEGEELDSATLLSVLPACAEL-HLLFLGRVVHGYSVKTGFISQTSLANV 337

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y           +F N    ++ +W AMI  Y  +    K   LF  M   G R D
Sbjct: 338 LLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPD 397

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
              I +A+ A     +LK GK +H YA+++G E  L V++ +++MYVKCG M +A+ IF+
Sbjct: 398 IFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFD 457

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            + + D ++W T+I G   N   + A S++ +M L  + P+  T   ++ A++ L++LE+
Sbjct: 458 GVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLER 516

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           GR++HA  ++     D FV  +L+DMY KCG +  A  LF ++  +N + W  M+ G   
Sbjct: 517 GREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGM 576

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G + + LFE M+  G+ PD+ +F  +L ACS++GL  E +  F  MR+++ IEP ++
Sbjct: 577 HGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLK 636

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD L   G  KEA E I SMP E  +S+  +LL  CR+  + +  + VAE++  L
Sbjct: 637 HYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFEL 696

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-DLIFAK------------ 838
           EP ++  YVLL+NI+A A +W+ V   + ++  + ++++     I AK            
Sbjct: 697 EPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRN 756

Query: 839 ----------VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                     +  + KR++E G+ P   + L+  +      AL  HS KLA A+G+++  
Sbjct: 757 HPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLS 816

Query: 889 PSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
              +I   K                           +NRFHH   G C C
Sbjct: 817 EGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSC 866



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 237/560 (42%), Gaps = 88/560 (15%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFR 145
           D  L   L+ MY +CG L  ARR+FD+MP   D+  W ++++ YA +G+     + EG  
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGD-----LREGVL 182

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           LFR +          T++ +LK     G +   E VHG   K+G      V  AL+  Y+
Sbjct: 183 LFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYA 242

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K  + ++A  +FDGM  RDV+ W  M+     NG  ++   LFV +   G   D  ++  
Sbjct: 243 KSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLS 302

Query: 266 VLGVISD-----LGKRHEEQVQAYAIK-------------LLLYNNNS------------ 295
           VL   ++     LG+     V  Y++K             L +Y+N S            
Sbjct: 303 VLPACAELHLLFLGR----VVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM 358

Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              NVV W   ++ Y + G        F  M     + D      AL A AG + L  G+
Sbjct: 359 VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------------------- 381
            +HG  +++G    + V N+L+ MY K G                               
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNN 478

Query: 382 -----------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                       +  LR +  T+  +L A++SL   L   +++H +A++   + D FV+ 
Sbjct: 479 LANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSS-LERGREMHAYALRRGYLEDDFVAN 537

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ALID+Y + G++  A  LF+     +L +W  M+ GY +      A+ LF  M  SG   
Sbjct: 538 ALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAP 597

Query: 491 DEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           D  + +  + AC    +  +G +   A   +   E  L   + ++D+ +  G + +A   
Sbjct: 598 DAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEF 657

Query: 550 FNDIP-APDDVAWTTMISGC 568
            + +P  PD   W +++ GC
Sbjct: 658 IDSMPIEPDSSIWVSLLRGC 677



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 4/220 (1%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE---LDLCVSSGILDMYVKCGAMVDA 546
           +D+ +    ++ C  +  L+ GK+ H     S      +D  +   ++ MY+KCG + +A
Sbjct: 89  VDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENA 148

Query: 547 QSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           + +F+++P   DV  WT ++SG    G+    + ++ +M   GV PD +T + ++K  + 
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L ++E G  +H  L KL   S   VG +L+  YAK    +DA ++F  M  R+ + WN+M
Sbjct: 209 LGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSM 268

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           + G   +G  ++ ++LF  M   G E DS T + VL AC+
Sbjct: 269 ISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACA 308



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 7/218 (3%)

Query: 62  HAISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
           HA + ++LL  GKS H   + +       +TN LM MY +CG++  A+ +FD +  +D+I
Sbjct: 406 HAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMI 465

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           SWN+++  Y+ +   N     E F LF  +   +   + +T+  +L    S   +     
Sbjct: 466 SWNTLIGGYSRNNLAN-----EAFSLFTEMLLQLRPNA-VTMTCILPAAASLSSLERGRE 519

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H YAL+ G + D+FV+ AL+++Y K G +  A+ LFD +  ++++ W +M+  Y  +G 
Sbjct: 520 MHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGR 579

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           G +   LF  +  SG+ PD  S   +L   S  G R E
Sbjct: 580 GRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDE 617



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 35/320 (10%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S+   S+L        L LG+  H   + +  I    L N L+ MYS C       ++F 
Sbjct: 297 SATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFR 356

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            M  ++++SW +++ +Y  +G     +   G  LF+ +    T      +   L     +
Sbjct: 357 NMVQKNVVSWTAMITSYTRAG---LYDKVAG--LFQEMGLEGTRPDIFAITSALHAFAGN 411

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   ++VHGYA++ G+     V+ AL+ +Y K G + EAK +FDG+  +D++ W  ++
Sbjct: 412 ELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLI 471

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK---- 287
             Y+ N    E F LF ++    L P+  ++ C+L   + L       ++ AYA++    
Sbjct: 472 GGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYL 530

Query: 288 ------------------LLLYN------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                             LLL        +N N++ W   ++GY   G    AI  F  M
Sbjct: 531 EDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQM 590

Query: 324 IRSNVQYDSVTFLVALAAVA 343
             S +  D+ +F   L A +
Sbjct: 591 RVSGIAPDAASFSAILYACS 610



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL  A S S L  G+  HA  L    + D F+ N L+ MY +CG+L+ ARRLFD++ +++
Sbjct: 504 ILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKN 563

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
           LISW  ++A Y   G G      +   LF  +R S       + + +L  C  SG     
Sbjct: 564 LISWTIMVAGYGMHGRGR-----DAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEG 618

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           W          KI      +    +V++    G ++EA    D M  E D  +W  +LR 
Sbjct: 619 WRFFDAMRKEHKIEPRLKHYT--CMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRG 676


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/574 (32%), Positives = 306/574 (53%), Gaps = 46/574 (8%)

Query: 390  QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
              T+   L+++S LP  L   +Q+H  ++K  +  +  V T+L+ +Y + G +  A+ +F
Sbjct: 525  HLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVF 584

Query: 450  ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
            +         W A+I  Y+ + +  +A+ +  +   +G R D  T    + AC  +  L 
Sbjct: 585  DEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLA 644

Query: 510  QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
             G+ +   A + G    + V++  +D+YVKCG M  A+ +F+ +   D VAW  M+ G  
Sbjct: 645  TGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYA 704

Query: 570  DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
             NG    AL ++  M+  G+ PD +  A  + A + L AL+ GRQ    +   +   +P 
Sbjct: 705  SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 764

Query: 630  VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
            +G +L+DMYAKCG+  +A+++F+QM  ++ ++WNAM++GL   G+ +    L   M+  G
Sbjct: 765  LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 824

Query: 690  VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            V+ +  TFIG+L +C++TGL+ +    FH M + Y I P +EHY  +VD L RAG  +EA
Sbjct: 825  VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 884

Query: 750  GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
             +L+  MP  A+A +  ALLG C++  +TE  + V ++L+ LEP++S  YV+LSNI++  
Sbjct: 885  HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 944

Query: 810  NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
             +W+D    R +MK K V+K PA                       D I+ K++ L   +
Sbjct: 945  GRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 1004

Query: 847  KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
            K  GY P T+ V+ DVE+EEKE  L +HSEKLA A+ L+ T P   I             
Sbjct: 1005 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH 1064

Query: 894  --------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                    ++++E +    NRFH  RDG C C D
Sbjct: 1065 TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 1098



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 41/414 (9%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HAR L      +  +  +L+++Y++CG L  A+R+FD+MP    + W +++ AY  
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G+     + E   + R+   +       T   +L  C     +   ETV   A + G+ 
Sbjct: 605 AGD-----LREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              FV+ A V++Y K G++ +A+ +FD M+ +D V W  M+  YA NG   E   LF+ +
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNVVLWNKKLSGYLQV 310
              G+ PD  +V   L   + LG      +   AI+++ ++    N VL    +  Y + 
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGAL---DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC 776

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G    A   F  M + ++    + +   +  +  T +  +   + G   KSG     +  
Sbjct: 777 GSTVEAWVVFQQMRKKDI----IVWNAMILGLGMTGHEKIAFALVGQMEKSGVK---LND 829

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           N+ I +     C C   T    +    R   ++ +  H+S +I  +              
Sbjct: 830 NTFIGLL----CSC---THTGLIQDGRRYFHNMTKLYHISPRIEHYG------------- 869

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHM 483
            ++D+  R G + EA  L ++         NA+I G +L     H+  EL  H+
Sbjct: 870 CMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGGCKIHRNTELAEHV 919


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/583 (34%), Positives = 313/583 (53%), Gaps = 61/583 (10%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG---S 441
           G   D++T++S++ A + L   + L  Q+H  A++    +D+ VS  L+D+Y ++    +
Sbjct: 249 GFEPDRYTMSSMISACTELGS-VRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQA 307

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHMHTSGERLDEITIATAVK 500
           M  A  +FE     D+ +W A+I GY+ S    +K + LF  M     + + IT ++ +K
Sbjct: 308 MDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILK 367

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  +     G+Q+HA+ +KS       V + ++ MY + G M +A+ +FN +       
Sbjct: 368 ACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE----- 422

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
             +MIS C+  G +     + H++    +     TFA L+ A++ +  L +G+Q+HA  +
Sbjct: 423 -RSMIS-CITEGRD---APLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTL 477

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           K    SD FV  SLV MY++CG +EDA   F ++  RN + W +M+ GLA+HG  E  L 
Sbjct: 478 KAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALS 537

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           LF DM   GV+P+ VT+I VLSACS+ GLV E  E F  M+  +G+ P +EHY+ +VD L
Sbjct: 538 LFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLL 597

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
            R+G  KEA E I  MP +A A + + LLGACR   + E G+  A+ ++ LEP D + YV
Sbjct: 598 ARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYV 657

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFA 837
           LLSN++A A  WD+V   R  M+  N+ K+                        A  I+ 
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYG 717

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST--PPSSVILS 895
           K++ L+  IK  GYVPDT  VL D+ +E KE+ L  HSEK+A A+GLI+T  P    I  
Sbjct: 718 KLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFK 777

Query: 896 N-------------------KEPLY--ANRFHHLRDGMCPCAD 917
           N                   +E +   +NRFH ++DG C C +
Sbjct: 778 NLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGE 820



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 158/631 (25%), Positives = 279/631 (44%), Gaps = 87/631 (13%)

Query: 11  PRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL 70
           PR         S    T+   P  SL+  P L  SH S  S+          A    DL 
Sbjct: 13  PRQPPPPPPPPSPPNSTFPRYPK-SLAAHPALSSSHPSDVSALLA------AAARAGDLR 65

Query: 71  LGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAA 128
           LG++ H R+L    +  D  + N+L+T+YSRCG++  AR +FD M   RD++SW ++ + 
Sbjct: 66  LGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASC 125

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-YVWASETVHGYALK 187
            A +G   AE   E   L   + ES    +  TL  +   C     Y      V G   K
Sbjct: 126 LARNG---AER--ESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHK 180

Query: 188 IGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +GL W  D  V  AL+++ ++ G +  A+ +FDG+ E+ VV+W +++  Y +    EE  
Sbjct: 181 MGL-WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLG------------------------------- 274
            +F+D    G  PD  ++  ++   ++LG                               
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMY 299

Query: 275 -KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG-DNHGAIECFVNMIRSNVQYDS 332
            K + EQ   YA K+      ++V+ W   +SGY+Q G   +  +  F  M+  +++ + 
Sbjct: 300 AKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH 359

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR----- 387
           +T+   L A A   + + G+Q+H   +KS   +A  VGN+L++MY++ GC+   R     
Sbjct: 360 ITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQ 419

Query: 388 ----------------------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                           T AS++ A++S+   L   +Q+H   +K
Sbjct: 420 LYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGM-LTKGQQLHAMTLK 478

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               +D FVS +L+ +Y R G + +A   F      ++ +W +MI G      + +AL L
Sbjct: 479 AGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSL 538

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYV 538
           F  M  +G + +++T    + AC  + ++++GK+   +     G    +   + ++D+  
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           + G + +A    N++P   D + W T++  C
Sbjct: 599 RSGLVKEALEFINEMPLKADALVWKTLLGAC 629



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 168/329 (51%), Gaps = 15/329 (4%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  V +ALID+  RNG +A A  +F+      +  W  +I  Y+    + +A+E+F    
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG--- 541
             G   D  T+++ + AC  L  ++ G Q+H+ A++ GF  D CVS G++DMY K     
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNG-EEDLALSIYHQMRLSGVVPDEFTFAILV 600
           AM  A  +F  +   D ++WT +ISG V +G +E+  + ++ +M    + P+  T++ ++
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
           KA + ++  + GRQ+HA++IK + ++   VG +LV MYA+ G +E+A  +F Q       
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQ------- 419

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           L+   ++     G           M   G+   S TF  ++SA +  G++++  +  H M
Sbjct: 420 LYERSMISCITEGRDAPLDHRIGRMDM-GIS--SSTFASLISAAASVGMLTKG-QQLHAM 475

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             K G   +    + LV    R G  ++A
Sbjct: 476 TLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 10/210 (4%)

Query: 508 LKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMI 565
           L+ G+ +H   ++    + D  V++ +L +Y +CGA+  A+++F+ +    D V+WT M 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS-----SCLTALEQGRQIHANLI 620
           S    NG E  +L +  +M  SG++P+ +T   +  A       CL        +H   +
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
                +D  VG +L+DM A+ G++  A  +F  +  +  V+W  ++    Q    EE ++
Sbjct: 184 ---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           +F D    G EPD  T   ++SAC+  G V
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSV 270


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/553 (35%), Positives = 297/553 (53%), Gaps = 47/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H   I        F+ T L+ +Y R G++ +A  + +      + +W  MI GY  +
Sbjct: 30  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT 89

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +AL+LF  M  +G   +E T+AT + +C     + QGKQ+H+  +K+ FE  + V 
Sbjct: 90  ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG 149

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K   + +A+ +F+ +P  D V+ T +ISG    G ++ AL ++ Q+   G+ 
Sbjct: 150 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQ 209

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  TF  LV A S L +L+ G+Q+HA +++ +      +  SL+DMY+KCG +  +  +
Sbjct: 210 CNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRV 269

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  R+ V WNAML+G  +HG G E + LF+D+    V+PDSVT + VLS CS+ GLV
Sbjct: 270 FDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLV 328

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F  + ++        HY  ++D LGR+GR ++A  LI +MPFE++ S+  +LLG
Sbjct: 329 DEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 388

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV  +   G+ VA+KL+ +EP ++  YV+LSNI+AAA  W DV   R  M  K V K+
Sbjct: 389 ACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKE 448

Query: 831 PADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                          I AK++ +   IK  G+VPD   VL DV++E+K
Sbjct: 449 PGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQK 508

Query: 868 ERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLY--------ANR 904
           ER L  HSEKLA  +GL++TPP   I   K                 +Y         NR
Sbjct: 509 ERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNR 568

Query: 905 FHHLRDGMCPCAD 917
           FH L  G C C D
Sbjct: 569 FHLLTHGNCTCGD 581



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 154/277 (55%), Gaps = 3/277 (1%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A+ AC     L +G+Q+HA  + + +   + + + ++ MYV+CGA+ DA+++ + +P   
Sbjct: 16  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+WTTMISG         AL ++ +M  +G +P+E+T A ++ + S   ++ QG+Q+H+
Sbjct: 76  VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L+K +  S  FVG SL+DMYAK  NI++A  +F  +  R+ V   A++ G AQ G  EE
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYSFL 736
            L LF  + + G++ + VTF  +++A S  GL S  Y +  H +  +  +   V   + L
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALS--GLASLDYGKQVHALILRKELPFFVALQNSL 253

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
           +D   + G+   +  +  +M   +  S +  L+G  R
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 290



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 42/356 (11%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           +S+   ++ + +   I    L  G+  HAR++ +   P  FL   L+TMY RCG+L  AR
Sbjct: 6   ASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDAR 65

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            + D+MP+R ++SW ++++ Y+ +     E   E   LF  +  +    +  TLA +L  
Sbjct: 66  NVLDRMPERSVVSWTTMISGYSQT-----ERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     ++  + VH   +K       FV  +L+++Y+K   I+EA+ +FD + ERDVV  
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
             ++  YA+ G  EE   LF  L+  G+  +  +   ++  +S L    + +QV A  ++
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 288 ---------------------LLLYNNN-------SNVVLWNKKLSGYLQVGDNHGAIEC 319
                                 LLY+          +VV WN  L GY + G  H  I  
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 300

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK-------SGFYSAVI 368
           F ++    V+ DSVT L  L+  +    ++ G  I  T +K       +G Y  +I
Sbjct: 301 FKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCII 355



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 191/423 (45%), Gaps = 58/423 (13%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+Q+H   + + +  AV +G  L+ MY + G +                           
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G   +++TLA+VL  S S P+ ++  KQ+H   +K +  +  F
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVL-TSCSGPQSIYQGKQVHSLLVKTNFESHMF 147

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V ++L+D+Y ++ ++ EA  +F+     D+ +  A+I GY       +AL+LF  +++ G
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 207

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + + +T  T V A   L  L  GKQ+HA  ++      + + + ++DMY KCG ++ ++
Sbjct: 208 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSR 267

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+++     V+W  M+ G   +G     +S++  +    V PD  T   ++   S   
Sbjct: 268 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGG 326

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
            +++G  I   ++K + S+    G    ++D+  + G +E A  L + M   +T  +W +
Sbjct: 327 LVDEGLDIFDTVVK-EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 385

Query: 665 MLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SYTGLVSEAYENFHLM 720
           +L     H N   GE   +   +M     EP++     +LS   +  G+  + ++   LM
Sbjct: 386 LLGACRVHANVHVGELVAQKLLEM-----EPENAGNYVILSNIYAAAGMWKDVFKVRKLM 440

Query: 721 REK 723
            EK
Sbjct: 441 LEK 443



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 47/318 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV W   +SGY Q   +  A++ F+ M+R+    +  T    L + +G  ++  G+Q+H
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK-------------------MGCVC------------ 384
              +K+ F S + VG+SL++MY+K                   + C              
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ +  T  +++ A S L   L   KQ+H   ++ +      +  +L
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLA-SLDYGKQVHALILRKELPFFVALQNSL 253

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G +  +  +F+N     + +WNAM+ GY      H+ + LF  +H    + D 
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDS 312

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG-ILDMYVKCGAMVDAQSIFN 551
           +T+   +  C    ++ +G  +    +K    L      G I+D+  + G +  A ++  
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIE 372

Query: 552 DIPAPDDVA-WTTMISGC 568
           ++P     + W +++  C
Sbjct: 373 NMPFESTPSIWGSLLGAC 390


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/574 (32%), Positives = 306/574 (53%), Gaps = 46/574 (8%)

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
             T+   L+++S LP  L   +Q+H  ++K  +  +  V T+L+ +Y + G +  A+ +F
Sbjct: 70  HLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVF 129

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           +         W A+I  Y+ + +  +A+ +  +   +G R D  T    + AC  +  L 
Sbjct: 130 DEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLA 189

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G+ +   A + G    + V++  +D+YVKCG M  A+ +F+ +   D VAW  M+ G  
Sbjct: 190 TGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYA 249

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG    AL ++  M+  G+ PD +  A  + A + L AL+ GRQ    +   +   +P 
Sbjct: 250 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 309

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +G +L+DMYAKCG+  +A+++F+QM  ++ ++WNAM++GL   G+ +    L   M+  G
Sbjct: 310 LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 369

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           V+ +  TFIG+L +C++TGL+ +    FH M + Y I P +EHY  +VD L RAG  +EA
Sbjct: 370 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 429

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            +L+  MP  A+A +  ALLG C++  +TE  + V ++L+ LEP++S  YV+LSNI++  
Sbjct: 430 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 489

Query: 810 NQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRI 846
            +W+D    R +MK K V+K PA                       D I+ K++ L   +
Sbjct: 490 GRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 549

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           K  GY P T+ V+ DVE+EEKE  L +HSEKLA A+ L+ T P   I             
Sbjct: 550 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH 609

Query: 894 --------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                   ++++E +    NRFH  RDG C C D
Sbjct: 610 TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 643



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 179/417 (42%), Gaps = 41/417 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  HAR L      +  +  +L+++Y++CG L  A+R+FD+MP    + W +++ A
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +G+     + E   + R+   +       T   +L  C     +   ETV   A + 
Sbjct: 147 YMDAGD-----LREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 201

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+    FV+ A V++Y K G++ +A+ +FD M+ +D V W  M+  YA NG   E   LF
Sbjct: 202 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 261

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-SNVVLWNKKLSGY 307
           + +   G+ PD  +V   L   + LG      +   AI+++ ++    N VL    +  Y
Sbjct: 262 LAMQAEGMKPDCYAVAGALSACTRLGAL---DLGRQAIRMVDWDEFLDNPVLGTALIDMY 318

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            + G    A   F  M + ++    + +   +  +  T +  +   + G   KSG     
Sbjct: 319 AKCGSTVEAWVVFQQMRKKDI----IVWNAMILGLGMTGHEKIAFALVGQMEKSGVK--- 371

Query: 368 IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           +  N+ I +     C C   T    +    R   ++ +  H+S +I  +           
Sbjct: 372 LNDNTFIGLL----CSC---THTGLIQDGRRYFHNMTKLYHISPRIEHYG---------- 414

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHM 483
               ++D+  R G + EA  L ++         NA+I G +L     H+  EL  H+
Sbjct: 415 ---CMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGGCKIHRNTELAEHV 464


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 203/575 (35%), Positives = 297/575 (51%), Gaps = 50/575 (8%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           +LAS++ ++ S  +   L +  H   IK  D    SF+   L+++Y +      A+ L  
Sbjct: 8   SLASLVESAVST-QCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                 + TW A+I G + +     AL  FS+M     + ++ T   A KA G L     
Sbjct: 67  LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           GKQ+HA A+K+G   D+ V     DMY K G   +A+ +F+++P  +   W   +S  V 
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
            G  D AL+ + + R  G+ P +F  + ++ A + L+ LE G+ +H   +K     + FV
Sbjct: 187 EGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFV 246

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK--AH 688
           G +LVDMY KCG+IEDA   F +M  RN V WNAM+ G A  G  +  + LF++M   +H
Sbjct: 247 GSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 306

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            V P+ VTF+ VLSACS  G V+   E F  MR +YGIEP  EHY+ +VD LGRAG  ++
Sbjct: 307 RVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ 366

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I  MP   + S+  ALLGA ++ G +E GK  A+ L  L+P DS  +VLLSN+FAA
Sbjct: 367 AYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAA 426

Query: 809 ANQWDDVTSARGEMKRKNVK-------------------KDPADLIFAKVEGLIKRIK-- 847
           A +W++ T  R EMK   +K                   KD +    ++++ ++ +++  
Sbjct: 427 AGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGE 486

Query: 848 --EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA--- 902
               GY+PDT F L D+EEEEK   ++YHSEK+A A+GLIS P    I   K        
Sbjct: 487 MEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDC 546

Query: 903 --------------------NRFHHLRDGMCPCAD 917
                               N FH  RD  C C D
Sbjct: 547 HSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRD 581



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 11/209 (5%)

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           L+GK  HA  + + QI D F+  +   MYS+ G    AR++FD+MP+R++ +WN+ L+  
Sbjct: 125 LVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNS 184

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
               EG  ++    F    + +E I  T    ++ +L  C     +   ++VH  A+K  
Sbjct: 185 VL--EGRYDDALTAF--IEARKEGIEPTD-FMVSSVLSACAGLSVLEVGKSVHTLAVKAC 239

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           +V + FV  ALV++Y K G I +A+  FD M ER++V W  M+  YA  G  +    LF 
Sbjct: 240 VVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFD 299

Query: 250 DL----HRSGLCPDDESVQCVLGVISDLG 274
           ++    HR  + P+  +  CVL   S  G
Sbjct: 300 EMTCGSHR--VAPNYVTFVCVLSACSRAG 326



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 46/348 (13%)

Query: 39  LPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNNLMTM 97
           +PFL  +  +S         ++  A+ST    LG++ HA+I+ +   P   F+ N+L+ M
Sbjct: 1   MPFLSPNSLAS---------LVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNM 51

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
           YS+      A+ L    P+R +++W +++A    +G       T     F ++R      
Sbjct: 52  YSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGR-----FTSALFHFSNMRRDSIQP 106

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           +  T     K   S       + VH  A+K G + D FV  +  ++YSK G   EA+ +F
Sbjct: 107 NDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMF 166

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           D M ER++  W   L      G  ++    F++  + G+ P D  V  VL   + L    
Sbjct: 167 DEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLE 226

Query: 278 -EEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYL 308
             + V   A+K  +  N                              N+V WN  + GY 
Sbjct: 227 VGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYA 286

Query: 309 QVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
             G    A+  F  M      V  + VTF+  L+A +   ++N+G +I
Sbjct: 287 HQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 334



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 113/539 (20%), Positives = 187/539 (34%), Gaps = 137/539 (25%)

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-IGLVWDEFVSGALVNIYSKFGKIRE 212
           + F S  +LA L++  +S+         H   +K +      F+   LVN+YSK  +   
Sbjct: 1   MPFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNS 60

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           A+ L      R VV W  ++    +NG F   +FH F ++ R  + P+D +  C      
Sbjct: 61  AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFH-FSNMRRDSIQPNDFTFPCAFKASG 119

Query: 272 DL-GKRHEEQVQAYAIK-------------LLLYNN---------------NSNVVLWNK 302
            L      +QV A A+K               +Y+                  N+  WN 
Sbjct: 120 SLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNA 179

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            LS  +  G    A+  F+   +  ++         L+A AG   L +G+ +H   +K+ 
Sbjct: 180 YLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKAC 239

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
               + VG++L++MY K G          ++    RA   +PE                 
Sbjct: 240 VVGNIFVGSALVDMYGKCG----------SIEDAERAFDEMPE----------------- 272

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
                          RN                 L TWNAMI GY     +  A+ LF  
Sbjct: 273 ---------------RN-----------------LVTWNAMIGGYAHQGQADMAVTLFDE 300

Query: 483 MHTSGERL--DEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILD 535
           M     R+  + +T    + AC     +  G ++       Y ++ G E   CV    +D
Sbjct: 301 MTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV----VD 356

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +  + G +  A      +P                                  + P    
Sbjct: 357 LLGRAGMVEQAYQFIKKMP----------------------------------IRPTVSV 382

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           +  L+ AS      E G+    NL +LD   D    + L +M+A  G  E+A ++ K+M
Sbjct: 383 WGALLGASKMFGKSELGKVAADNLFELD-PLDSGNHVLLSNMFAAAGRWEEATLVRKEM 440


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 296/560 (52%), Gaps = 47/560 (8%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           + L+  KQ+H          +  ++T L+ +Y  + S+  A  LF+     +L  WN +I
Sbjct: 61  KALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLI 120

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY  +     A+ L+  M   G R D  T+   +KAC  L  + +G+ +H Y +KSG+E
Sbjct: 121 RGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWE 180

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            DL V + ++DMY KCG ++DA  +F+ I   D V W +M++    NG  D ++S+  +M
Sbjct: 181 RDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREM 240

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
             +GV P E T   ++ +S+ +  L  GR+IH    +    S+  V  +L+DMYAKCG++
Sbjct: 241 AANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSV 300

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           + A  LF+++  +  V WNA++ G A HG     L LF+ M+     PD +TF+GVL+AC
Sbjct: 301 KVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAAC 359

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S   L+ E    ++LM   YGI P V+HY+ ++D LG  G+  EA +LI +M  +  + +
Sbjct: 360 SRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGV 419

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             ALL +C++ G+ E  +   EKL+ LEP DS  YV+L+N++A + +W+ V   R  M  
Sbjct: 420 WGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMID 479

Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           K +KK+ A                       D I+A+++ L   + E GY PDT  V  D
Sbjct: 480 KRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHD 539

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK-----EPLYA-------------- 902
           VEE+EK   +  HSE+LA A+GLIST P + +L  K     E  +               
Sbjct: 540 VEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREIT 599

Query: 903 ----NRFHHLRDGMCPCADN 918
               NR+H  + GMC C D+
Sbjct: 600 VRDVNRYHSFKHGMCSCGDH 619



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 169/326 (51%), Gaps = 9/326 (2%)

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           ++ I +Y KM    GLR D FTL  VL+A S+L   +   + IH + IK+    D FV  
Sbjct: 130 DNAIILYHKM-LDYGLRPDNFTLPFVLKACSAL-SAIGEGRSIHEYVIKSGWERDLFVGA 187

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ALID+Y + G + +A  +F+     D   WN+M+  Y  + +  +++ L   M  +G R 
Sbjct: 188 ALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRP 247

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
            E T+ T + +   +  L  G+++H +  + GF+ +  V + ++DMY KCG++  A ++F
Sbjct: 248 TEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALF 307

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
             +     V+W  +I+G   +G    AL ++ +MR     PD  TF  ++ A S    L+
Sbjct: 308 ERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLD 366

Query: 611 QGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLV 667
           +GR ++ NL+  D    P V     ++D+   CG +++AY L + M ++ ++ +W A+L 
Sbjct: 367 EGRALY-NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLN 425

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPD 693
               HGN E      E +    +EPD
Sbjct: 426 SCKIHGNVELAELALEKLIE--LEPD 449



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 178/383 (46%), Gaps = 47/383 (12%)

Query: 12  RHKHTYVIFS--SFTKDTYRNLPSF---SLSLLPFLQKSHFSSSSSSSQWFSILRHAIST 66
           + +HT  IF+   F++  Y +L +    S+   P    +H+        + S+L+  I +
Sbjct: 8   KTQHTSFIFNLFPFSQSFYHSLATHQTASVDSFPPQPTTHYG-------YTSLLQSCIDS 60

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
             L  GK  HA+  +     ++ L   L+ +Y+   SL+ AR LFDK+P ++L  WN ++
Sbjct: 61  KALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLI 120

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             YA +G  +         L+  + +        TL  +LK C +   +    ++H Y +
Sbjct: 121 RGYAWNGPHD-----NAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVI 175

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K G   D FV  AL+++Y+K G + +A  +FD +  RD VLW  ML AYA+NG  +E   
Sbjct: 176 KSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESIS 235

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDL------------GKRHEEQ---------VQAYA 285
           L  ++  +G+ P + ++  V+   +D+            G RH  Q         +  YA
Sbjct: 236 LCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYA 295

Query: 286 ------IKLLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                 + L L+       VV WN  ++GY   G   GA++ F  M R   + D +TF+ 
Sbjct: 296 KCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKEDRPDHITFVG 354

Query: 338 ALAAVAGTDNLNLGQQIHGTTLK 360
            LAA +    L+ G+ ++   ++
Sbjct: 355 VLAACSRGRLLDEGRALYNLMVR 377



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 53/330 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+ LWN  + GY   G +  AI  +  M+   ++ D+ T    L A +    +  G+ IH
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------- 384
              +KSG+   + VG +LI+MY+K GCV                                
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPD 231

Query: 385 ------------GLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVS 429
                       G+R  + TL +V+ +S+    LP G    ++IH    ++   ++  V 
Sbjct: 232 ESISLCREMAANGVRPTEATLVTVISSSADVACLPYG----REIHGFGWRHGFQSNDKVK 287

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TALID+Y + GS+  A  LFE      + +WNA+I GY +   +  AL+LF  M    +R
Sbjct: 288 TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKE-DR 346

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQS 548
            D IT    + AC    +L +G+ ++   ++  G    +   + ++D+   CG + +A  
Sbjct: 347 PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYD 406

Query: 549 IFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           +  ++   PD   W  +++ C  +G  +LA
Sbjct: 407 LIRNMSVKPDSGVWGALLNSCKIHGNVELA 436


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 230/788 (29%), Positives = 361/788 (45%), Gaps = 150/788 (19%)

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           +  + + G++ +A+ LF  M  R    +  ML  YA NG   +    F  + R    PD 
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR----PDS 169

Query: 261 ESVQCVL---GVISDLGKRH----EEQVQ---AYAIKLLLYNNN---------------S 295
            S   +L   GV S L        E  V+   +Y + +  + N+                
Sbjct: 170 FSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEK 229

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           + V WN  L+ Y++ G    A E F     S  ++D++++   +A       +   Q++ 
Sbjct: 230 DAVSWNGMLAAYVRNGRIQEARELF----DSRTEWDAISWNALMAGYVQRSQIEEAQKMF 285

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
               +      V+  N++++ Y++ G           +A   R     P           
Sbjct: 286 NKMPQRD----VVSWNTMVSGYARRG----------DMAEARRLFDVAP----------- 320

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                  + D F  TA++  Y +NG + EA+ +F+     +  +WNAM+  Y+      +
Sbjct: 321 -------IRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEE 373

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A ELF  M                                          ++   + +L 
Sbjct: 374 AKELFDAMPCR---------------------------------------NVASWNTMLT 394

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            Y + G + +A++IF  +P  D V+W  M++     G  +  L ++ +M   G   +   
Sbjct: 395 GYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSA 454

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           FA ++   + + ALE G Q+H+ LIK       FVG +L+ MY KCG++E+A+  F++M+
Sbjct: 455 FACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEME 514

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            R+ V WN M+ G A+HG G+E L++F+ M+    +PD +T +GVL+ACS++GLV +   
Sbjct: 515 ERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGIS 574

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F+ M   +G+  + EHY+ ++D LGRAGR  EA  L+  MPFE  ++M  ALLGA R+ 
Sbjct: 575 YFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIH 634

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            ++E G+  AEK+  LEP ++  YVLLSNI+A++ +W DV   R  M  + VKK P    
Sbjct: 635 RNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSW 694

Query: 833 --------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                               + I+A +E L  R+K+ GYV  TD VL DVEEEEKE  L 
Sbjct: 695 IEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLK 754

Query: 873 YHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLR 909
           YHSEKLA AYG++  PP   I   K                           +NRFHH R
Sbjct: 755 YHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFR 814

Query: 910 DGMCPCAD 917
           DG C C D
Sbjct: 815 DGSCSCGD 822



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 225/515 (43%), Gaps = 64/515 (12%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           ++ L HA+  S  L        + +   + D    N +++ ++  G +  AR  FD  P+
Sbjct: 172 YNTLLHALGVSSSLADVRA---LFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPE 228

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE--SITFTSRLTLAPLLKLCLSSGY 174
           +D +SWN +LAAY  +G      + E   LF S  E  +I++ +           L +GY
Sbjct: 229 KDAVSWNGMLAAYVRNG-----RIQEARELFDSRTEWDAISWNA-----------LMAGY 272

Query: 175 VWASETVHGYALKIGLVWDEFVS-GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
           V  S+      +   +   + VS   +V+ Y++ G + EA+ LFD    RDV  W  ++ 
Sbjct: 273 VQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVS 332

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
            YA+NG  EE   +F  +      PD  +V     + + + +R  E+    A +L     
Sbjct: 333 GYAQNGMLEEAKRVFDAM------PDKNAVSWNAMMAAYVQRRMMEE----AKELFDAMP 382

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             NV  WN  L+GY Q G    A   F  M     Q D+V++   LAA            
Sbjct: 383 CRNVASWNTMLTGYAQAGMLDEARAIFGMM----PQKDAVSWAAMLAA------------ 426

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                     YS +      + ++ +MG  CG   ++   A VL   + +   L    Q+
Sbjct: 427 ----------YSQIGFSEETLQLFKEMG-RCGEWVNRSAFACVLSTCADI-AALECGMQL 474

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H   IK       FV  AL+ +Y + GSM EA   FE  +  D+ +WN MI GY      
Sbjct: 475 HSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFG 534

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--S 531
            +ALE+F  M  +  + D+IT+   + AC    ++++G   + Y+M   F +       +
Sbjct: 535 KEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHRDFGVATKPEHYT 593

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
            ++D+  + G + +A ++  D+P  PD   W  ++
Sbjct: 594 CMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 628



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 9/169 (5%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G   H+R++ +      F+ N L+ MY +CGS+  A   F++M +RD++SWN+++A 
Sbjct: 468 LECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAG 527

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-- 186
           YA  G G      E   +F ++R++ T    +TL  +L  C  SG V      + Y++  
Sbjct: 528 YARHGFGK-----EALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV-EKGISYFYSMHR 581

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
             G+         ++++  + G++ EA  L   M  E D  +W  +L A
Sbjct: 582 DFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGA 630


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/574 (33%), Positives = 302/574 (52%), Gaps = 50/574 (8%)

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF-ENK 452
           A++LR S  L   +   +Q+H   + + T  D+ ++T L+D+Y   G ++ A  +F E  
Sbjct: 72  ATILR-SCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQG 511
           +  ++  WN +I  Y        A+EL+  M   G  + D  T    +KAC  LL L  G
Sbjct: 131 NQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAG 190

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +++H   M++ +  D+ V +G++DMY KCG M +A ++FND    D   W +MI+ C  N
Sbjct: 191 REVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQN 250

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G    AL++   M   G+ P   T    + A++  +AL +GR++H    +    S   + 
Sbjct: 251 GRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLK 310

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-V 690
            SL+DMYAK G +  A++LF+Q+  R  + WNAM+ G   HG+ +   +LF  M++   V
Sbjct: 311 TSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQV 370

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            PD +TF+GVLSAC++ G+V EA E F LM   Y I+P V+HY+ LVD LG +GR KEA 
Sbjct: 371 MPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEAS 430

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           ++I  M  +  + +  ALL  C++  + E  +   +KL+ LEP D+  YVLLSNI+A + 
Sbjct: 431 DVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESG 490

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
           +W++    R  M  + +KK  A                       D I+ ++E L   I 
Sbjct: 491 KWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLIS 550

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA----- 902
           + GYVPDT  V  +VE++EK   ++ HSE+LA A+GLISTPP + +L  K          
Sbjct: 551 QTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHV 610

Query: 903 ------------------NRFHHLRDGMCPCADN 918
                             NR+HH  +G C C D+
Sbjct: 611 VIKLISQIEQREIIIRDVNRYHHFVNGECSCKDH 644



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 7/216 (3%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           S   S  + S + +ILR  + +  +  G+  HAR+L S    D  L   L+ +Y+ CG +
Sbjct: 60  SPCPSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHV 119

Query: 105 VYARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTL 162
             ARR+FD+MP++ ++  WN ++ AYA  G   A        L+R++    +      T 
Sbjct: 120 SLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEA-----AIELYRAMLAYGSMKPDNFTY 174

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
            P+LK C +   + A   VH   ++     D FV   L+++Y+K G + EA  +F+    
Sbjct: 175 PPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTI 234

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           RD  +W  M+ A  +NG   E   L  ++   G+ P
Sbjct: 235 RDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAP 270



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 145/335 (43%), Gaps = 54/335 (16%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLG 351
           N  NV LWN  +  Y + G    AIE +  M+   +++ D+ T+   L A A   +L+ G
Sbjct: 131 NQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAG 190

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------CGLR 387
           +++H   +++ + + V V   LI+MY+K GC+                        CG  
Sbjct: 191 REVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQN 250

Query: 388 ---TDQFTLASVLRASSSLPE---------------GLHLSKQIHVHAIKNDTVADSFVS 429
               +  TL   + A    P                 L   +++H +  +    +   + 
Sbjct: 251 GRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLK 310

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           T+L+D+Y ++G +  A  LFE     +L +WNAMI G+ +  ++  A ELFS M +  + 
Sbjct: 311 TSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQV 370

Query: 490 L-DEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVKCGAM 543
           + D IT    + AC    M+++ K++       Y++K   +   C    ++D+    G  
Sbjct: 371 MPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTC----LVDVLGHSGRF 426

Query: 544 VDAQSIFND-IPAPDDVAWTTMISGCVDNGEEDLA 577
            +A  +    +  PD   W  +++GC  +   +LA
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA 461



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 12/236 (5%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+   +  DL  G+  H R++ ++   D F+   L+ MY++CG +  A  +F+    RD
Sbjct: 177 VLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRD 236

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
              WNS++AA   +G        E   L R++       +  TL   +     +  +   
Sbjct: 237 AAVWNSMIAACGQNGRP-----AEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRG 291

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +HGY  + G    + +  +L+++Y+K G +  A  LF+ +  R+++ W  M+  +  +
Sbjct: 292 RELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMH 351

Query: 239 GFGEEVFHLFVDLH-RSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAIK 287
           G  +  F LF  +   + + PD  +   VL      G++ +  +  +  V  Y+IK
Sbjct: 352 GHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIK 407



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 6/184 (3%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM- 654
           +A ++++     A+  GRQ+HA L+      D  +   LVD+YA CG++  A  +F +M 
Sbjct: 71  YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEA 713
           +  N  LWN ++   A+ G  E  ++L+  M A+G ++PD+ T+  VL AC+    +S  
Sbjct: 131 NQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAG 190

Query: 714 YE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            E +  +MR  +  +  V   + L+D   + G   EA  +         A++  +++ AC
Sbjct: 191 REVHDRVMRTNWATDVFV--CTGLIDMYAKCGCMDEAWAVFNDTTIR-DAAVWNSMIAAC 247

Query: 773 RVQG 776
              G
Sbjct: 248 GQNG 251


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 209/657 (31%), Positives = 322/657 (49%), Gaps = 102/657 (15%)

Query: 357  TTLKSGFY---SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
            T L SGF    S+ +V N    M +K  C      +Q+TL+SVL+  S L   L L K +
Sbjct: 359  TILISGFARAGSSEMVFNLFREMQAKGAC-----PNQYTLSSVLKCCS-LDNNLQLGKGV 412

Query: 414  HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
            H   ++N    D  +  +++D+Y +      AE LFE  +  D+ +WN MI  Y+ + + 
Sbjct: 413  HAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDV 472

Query: 474  HKALELFSH-------------------------------MHTSGERLDEITIATAVKAC 502
             K+L++F                                 M   G     +T + A+   
Sbjct: 473  EKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILA 532

Query: 503  GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-------- 554
              L  ++ G+Q+H   +K GF+ D  + S +++MY KCG M  A  I  D+P        
Sbjct: 533  SSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGN 592

Query: 555  --------APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
                        V+W +M+SG V NG+ +  L  +  M    VV D  T   ++ A +  
Sbjct: 593  ARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANA 652

Query: 607  TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
              LE GR +HA + K+    D +VG SL+DMY+K G+++DA+++F+Q +  N V+W +M+
Sbjct: 653  GILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMI 712

Query: 667  VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
             G A HG G   + LFE+M   G+ P+ VTF+GVL+ACS+ GL+ E    F +M++ Y I
Sbjct: 713  SGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCI 772

Query: 727  EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
             P VEH + +VD  GRAG   +    I         S+ ++ L +CR+  + E GKWV+E
Sbjct: 773  NPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSE 832

Query: 787  KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------- 832
             L+ + P D  AYVLLSN+ A+ ++WD+    R  M ++ VKK P               
Sbjct: 833  MLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFV 892

Query: 833  ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                     D I++ ++ LI R+KE GY  D   V+ DVEEE+ E  + +HSEKLA  +G
Sbjct: 893  MGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFG 952

Query: 884  LISTP---PSSVI------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            +I+T    P  +I                  L ++E +  +  RFHH + G C C D
Sbjct: 953  IINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGD 1009



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 176/669 (26%), Positives = 307/669 (45%), Gaps = 95/669 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+    +S S   LG + HA  + +  +      N+L+T+Y++  ++ +A++LFD++P R
Sbjct: 295 SLYHFTLSNSPPPLG-TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQR 353

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +  +W  +++ +A +G  ++E V   F LFR ++      ++ TL+ +LK C     +  
Sbjct: 354 NTQTWTILISGFARAG--SSEMV---FNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQL 408

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH + L+ G+  D  +  +++++Y K      A+ LF+ M E DVV W +M+ AY  
Sbjct: 409 GKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLR 468

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
            G  E+   +F                                      + L Y    +V
Sbjct: 469 AGDVEKSLDMF--------------------------------------RRLPYK---DV 487

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  + G LQ G    A+E    M+    ++ +VTF +AL   +   ++ LG+Q+HG 
Sbjct: 488 VSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGM 547

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            LK GF S   + +SL+ MY    C CG R D+ ++  +LR    +P             
Sbjct: 548 VLKFGFDSDGFIRSSLVEMY----CKCG-RMDKASI--ILR---DVP------------- 584

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                          +DV  R G+ A   Y  E K G  + +W +M+ GY+ +      L
Sbjct: 585 ---------------LDVL-RKGN-ARVSYK-EPKAG--IVSWGSMVSGYVWNGKYEDGL 624

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           + F  M      +D  T+ T + AC    +L+ G+ +HAY  K G  +D  V S ++DMY
Sbjct: 625 KTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMY 684

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            K G++ DA  +F     P+ V WT+MISG   +G+   A+ ++ +M   G++P+E TF 
Sbjct: 685 SKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFL 744

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNI-EDAYILFKQM 654
            ++ A S    +E+G + +  ++K     +P V    S+VD+Y + G++ +    +FK  
Sbjct: 745 GVLNACSHAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNG 803

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
               T +W + L     H N E   K   +M       D   ++ + + C+      EA 
Sbjct: 804 ISHLTSVWKSFLSSCRLHKNVEMG-KWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAA 862

Query: 715 ENFHLMREK 723
               LM ++
Sbjct: 863 RVRSLMHQR 871



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 177/384 (46%), Gaps = 48/384 (12%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H   +KN ++     +  L+ +Y ++ +MA A+ LF+     +  TW  +I G+  + +
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           S     LF  M   G   ++ T+++ +K C     L+ GK +HA+ +++G ++D+ + + 
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 533 ILDMYVKC-------------------------GAMVDAQSI------FNDIPAPDDVAW 561
           ILD+Y+KC                         GA + A  +      F  +P  D V+W
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            T++ G +  G E  AL   + M   G      TF+I +  +S L+ +E GRQ+H  ++K
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM----------------RNTVLWNAM 665
               SD F+  SLV+MY KCG ++ A I+ + + +                   V W +M
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G   +G  E+ LK F  M    V  D  T   ++SAC+  G++ E   + H   +K G
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGIL-EFGRHVHAYVQKIG 669

Query: 726 IEPEVEHYSFLVDALGRAGRTKEA 749
              +    S L+D   ++G   +A
Sbjct: 670 HRIDAYVGSSLIDMYSKSGSLDDA 693



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 34/278 (12%)

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +HA  +K+G    L  ++ +L +Y K   M  AQ +F++IP  +   WT +ISG    G 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            ++  +++ +M+  G  P+++T + ++K  S    L+ G+ +HA +++     D  +G S
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 634 LVDMYAKC-------------------------------GNIEDAYILFKQMDMRNTVLW 662
           ++D+Y KC                               G++E +  +F+++  ++ V W
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF-IGVLSACSYTGLVSEAYENFHLMR 721
           N ++ GL Q G     L+    M   G E  +VTF I ++ A S + +  E     H M 
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHV--ELGRQLHGMV 548

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            K+G + +    S LV+   + GR  +A  ++  +P +
Sbjct: 549 LKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLD 586



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 22/235 (9%)

Query: 57  FSI-LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR------- 108
           FSI L  A S S + LG+  H  +L      D F+ ++L+ MY +CG +  A        
Sbjct: 525 FSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVP 584

Query: 109 ---------RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
                    R+  K P   ++SW S+++ Y  +G+       +G + FR +   +     
Sbjct: 585 LDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGK-----YEDGLKTFRLMVRELVVVDI 639

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T+  ++  C ++G +     VH Y  KIG   D +V  +L+++YSK G + +A  +F  
Sbjct: 640 RTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQ 699

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             E ++V+W  M+  YA +G G     LF ++   G+ P++ +   VL   S  G
Sbjct: 700 SNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAG 754


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 235/776 (30%), Positives = 388/776 (50%), Gaps = 47/776 (6%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           LR + S     L   ++A  L S    D FL++ ++  ++  G    ARR     P  D 
Sbjct: 27  LRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDT 86

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           +SWNS+++ YA   +         F LF  LR S       +L+ L+K C   G +  +E
Sbjct: 87  VSWNSLISGYARFRQPGPV-----FDLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQNE 138

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
             HG  LK+GL+ + FV   L++ Y+K G +  A+  F      D V+W  M+  +  NG
Sbjct: 139 VAHGVCLKMGLL-NGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNG 197

Query: 240 FGEEVFHLFVDLHRSGLCPD--DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
             E+   +FV++   GL  +  + S+  VLG +SD+  R  EQV   ++K+ L    S +
Sbjct: 198 EFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDV--REGEQVFGLSVKMGLLCGCS-I 254

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            L N  ++ Y + G    AI+ F  M   +V   +     A  A+   +           
Sbjct: 255 HLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFE----------- 303

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                 +  V+ GN  +N Y  +  +  +R                P+ L   +QI    
Sbjct: 304 -----LFRLVLSGNMEVNEYMLINVLSAMRE---------------PKLLKSGRQIQGLC 343

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
            K   +  + V+ ALI +Y + G M  A ++F+     D  +WN++I GY  +    +AL
Sbjct: 344 QKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQAL 403

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           ++FS M     + ++ T+A+ ++        +Q  Q+H+Y +K GF +D  + S ++  Y
Sbjct: 404 KVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAY 463

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPDEFTF 596
            KC  + +++ +++DI   + +    M +  V  G    AL ++    RL   V D  T 
Sbjct: 464 GKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEV-DCITL 522

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           +I++KA   LT LE GR IH+  +K   S D FV  +++D+Y KCG +++A   F  +  
Sbjct: 523 SIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSK 582

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
            N V WNAM++G AQHG   E  +LF  M   G++PD +T++GVL++C + GLV+EA+  
Sbjct: 583 NNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTY 642

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
              M E +G+ P +EHY+ ++D  GR G  ++A   I  MP    A + + LL  C + G
Sbjct: 643 LSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHG 702

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           + + G+  A+KL+ L+P + SAYVLLSN++A+A +W+ V   R  MK+K + K+P 
Sbjct: 703 NVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPG 758



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A++A   LL      Q +A  +KSGF LD  +SS I++ +   G    A+    D P PD
Sbjct: 26  ALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPD 85

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+W ++ISG     +      +++ +R SG+ PDEF+ + LVK       LEQ    H 
Sbjct: 86  TVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCG---VLEQNEVAHG 142

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             +K+    + FV   L+D YAK G+++ A   FK+  + ++V+W AM+ G   +G  E+
Sbjct: 143 VCLKMGL-LNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEK 201

Query: 678 TLKLFEDMK--AHGVEPDSVTFIGVLSACS 705
             ++F +M+    G+E +  +   VL A S
Sbjct: 202 GREVFVEMRGLGLGLELNEFSLTSVLGALS 231



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 5/203 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL  A +++        H+ I+    I D  + + L+T Y +C  +  ++R++  +   
Sbjct: 423 SILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQI 482

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++  N++ A   H+G        +  +LF++          +TL+ +LK C +   +  
Sbjct: 483 NVLHLNAMAATLVHAGCH-----ADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEY 537

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H  ALK G+  D FV  A++++Y K G + EA   F  + + ++V W  M+  YA+
Sbjct: 538 GRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQ 597

Query: 238 NGFGEEVFHLFVDLHRSGLCPDD 260
           +G   EVF LF  +   G+ PD+
Sbjct: 598 HGCYHEVFELFNKMLELGIQPDE 620



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 15/214 (7%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+   + +DL  G++ H+  L S    D F+ + ++ +Y +CG++  A + F  +   +
Sbjct: 525 VLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNN 584

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L++WN+++  YA  G        E F LF  + E       +T   +L  C  +G V  +
Sbjct: 585 LVAWNAMVMGYAQHG-----CYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEA 639

Query: 179 ETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYA 236
            T     L++ G+V        +++++ + G + +AK   D M    D  +W+++L    
Sbjct: 640 HTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCN 699

Query: 237 ENG---FGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            +G    GE      ++L      P+++S   +L
Sbjct: 700 IHGNVDLGEVAAKKLIELQ-----PENDSAYVLL 728


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 198/587 (33%), Positives = 306/587 (52%), Gaps = 81/587 (13%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYC---RNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           KQ H   I+    AD+     +I  +C   ++G +  A  +F+     D   +N +  GY
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIK-FCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGY 95

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           +    +   + ++S M       ++ T    ++AC     +++GKQ+HA+ +K GF  D 
Sbjct: 96  LRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADG 155

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG-----CVDNGEEDL------ 576
              + ++ MYV   ++  A+ +F+++P  D V+WT++I+G      VD   E        
Sbjct: 156 FSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPER 215

Query: 577 --------------------ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
                               A +++ +MRL  VV D+F  A ++ A + L ALEQG+ IH
Sbjct: 216 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 275

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             + K     D  +  +++DMY KCG +E A  +F ++  +    WN M+ GLA HG GE
Sbjct: 276 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 335

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
             ++LF++M+   V PD +TF+ VLSAC+++GLV E    F  M E  G++P +EH+  +
Sbjct: 336 AAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCM 395

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG  +EA +LI  MP    A +  AL+GACR+ G+TE G+ + +K++ LEP +S
Sbjct: 396 VDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNS 455

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------AD 833
             YVLL+N++A+A +W+DV   R  M  + VKK P                       A 
Sbjct: 456 GRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAK 515

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I+AK++ +++ I+  GYVPDTD VL D++EEEKE  LYYHSEKLA A+GL+ T P   +
Sbjct: 516 EIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETL 575

Query: 894 LSNKE---------------PLY--------ANRFHHLRDGMCPCAD 917
             +K                 +Y         NRFHH R G C C D
Sbjct: 576 RISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKD 622



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 37/412 (8%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA+++     + +  ++N    GYL+       I  +  M+  +V  +  T+   + A  
Sbjct: 72  YALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACC 131

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               +  G+QIH   LK GF +     N+LI+MY              +L    R   ++
Sbjct: 132 IDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQ----------SLEQARRVFDNM 181

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           P+                   D    T+LI  Y + G + +A  +FE     +  +WNAM
Sbjct: 182 PQ------------------RDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAM 223

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I  Y+ SN  H+A  LF  M      LD+   A+ + AC  L  L+QGK +H Y  KSG 
Sbjct: 224 IAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGI 283

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           ELD  +++ ++DMY KCG +  A  +FN++P     +W  MI G   +G+ + A+ ++ +
Sbjct: 284 ELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKE 343

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVDMYAK 640
           M    V PD  TF  ++ A +    +E+G+   Q    ++ L    + F    +VD+  +
Sbjct: 344 MEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFG--CMVDLLGR 401

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ-HGN---GEETLKLFEDMKAH 688
            G +E+A  L  +M +         LVG  + HGN   GE+  K   +++ H
Sbjct: 402 AGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPH 453



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 143/350 (40%), Gaps = 49/350 (14%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           +S L  LQ S  S SS+ +     L    S S +   K  H++I+      D      ++
Sbjct: 1   MSSLQLLQASPPSLSSAKAHKLP-LYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVI 59

Query: 96  TM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
                S+ G L YA  +FDK+P  D   +N+I   Y       A N    F   R L +S
Sbjct: 60  KFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQL--ARNCI--FMYSRMLHKS 115

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
           ++  ++ T  PL++ C     +   + +H + LK G   D F    L+++Y  F  + +A
Sbjct: 116 VS-PNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQA 174

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           + +FD M +RDVV W  ++  Y++ GF ++   +F       L P+  SV          
Sbjct: 175 RRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVF------ELMPERNSVS--------- 219

Query: 274 GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                     WN  ++ Y+Q    H A   F  M   NV  D  
Sbjct: 220 --------------------------WNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKF 253

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
                L+A  G   L  G+ IHG   KSG      +  ++I+MY K GC+
Sbjct: 254 VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCL 303



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 26/255 (10%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           H S S +   +  ++R       +  GK  HA +L      D F  NNL+ MY    SL 
Sbjct: 113 HKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLE 172

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSG-------------EGNA-------------EN 139
            ARR+FD MP RD++SW S++  Y+  G             E N+               
Sbjct: 173 QARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNR 232

Query: 140 VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
           + E F LF  +R       +   A +L  C   G +   + +HGY  K G+  D  ++  
Sbjct: 233 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATT 292

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           ++++Y K G + +A  +F+ + ++ +  W  M+   A +G GE    LF ++ R  + PD
Sbjct: 293 VIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPD 352

Query: 260 DESVQCVLGVISDLG 274
             +   VL   +  G
Sbjct: 353 GITFVNVLSACAHSG 367



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 12/205 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L  GK  H  I  S    D  L   ++ MY +CG L  A  +F+++P +
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 316

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            + SWN ++   A  G+G A        LF+ +   +     +T   +L  C  SG V  
Sbjct: 317 GISSWNCMIGGLAMHGKGEA-----AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE 371

Query: 178 SETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML--- 232
            +    Y  ++ GL       G +V++  + G + EA+ L + M    D  +   ++   
Sbjct: 372 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGAC 431

Query: 233 RAYAENGFGEEVFHLFVDL--HRSG 255
           R +     GE++    ++L  H SG
Sbjct: 432 RIHGNTELGEQIGKKVIELEPHNSG 456


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/613 (33%), Positives = 320/613 (52%), Gaps = 80/613 (13%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           C    ++FT   + +A+S L + LHL   +H   IK    +D F+  +LI+ Y  +G+  
Sbjct: 167 CSEFPNKFTFPFLFKAASRL-KVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPD 225

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A  +F N  G D+ +WNAMI  + L     KAL LF  M     + + IT+ + + AC 
Sbjct: 226 LAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACA 285

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
             + L+ G+ + +Y   +GF   L +++ +LDMYVKCG + DA+ +FN +   D V+WTT
Sbjct: 286 KKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTT 345

Query: 564 MISG-----------CV--------------------DNGEEDLALSIYHQMRLS-GVVP 591
           M+ G           C+                     NG+  +ALS++H+M+LS    P
Sbjct: 346 MLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKP 405

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           DE T    + AS+ L A++ G  IH  + K D + +  +  SL+DMYAKCGN+  A  +F
Sbjct: 406 DEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVF 465

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             ++ ++  +W+AM+  LA +G G+  L LF  M    ++P++VTF  +L AC++ GLV+
Sbjct: 466 HAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVN 525

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  + F  M   YGI P+++HY  +VD  GRAG  ++A   I  MP   +A++  ALLGA
Sbjct: 526 EGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGA 585

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           C   G+ E  +   + L+ LEP +  A+VLLSNI+A A  W+ V++ R  M+  +VKK+P
Sbjct: 586 CSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEP 645

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPD-TDFVLLDVEEEEK 867
                                  +  I++K++ + ++ K  GY PD ++ + L  E+   
Sbjct: 646 WCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLM 705

Query: 868 ERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--R 904
           E++L  HSEKLA A+GLIST  S  I                     L +++ L  +  R
Sbjct: 706 EQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYR 765

Query: 905 FHHLRDGMCPCAD 917
           FHH R G C C D
Sbjct: 766 FHHFRGGKCSCLD 778



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 240/531 (45%), Gaps = 36/531 (6%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMY--SRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA +L +S+  D +  + L+T Y  S C  L+YA+ +F+++P  +L  WN+++  YA
Sbjct: 89  KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148

Query: 131 HSGEGNAENVTEGFRLFRSLRESIT-FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            S +      T+ F +F  +  S + F ++ T   L K       +     +HG  +K  
Sbjct: 149 SSSDP-----TQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKAS 203

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D F+  +L+N Y   G    A  +F  M  +DVV W  M+ A+A  G  ++   LF 
Sbjct: 204 LSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQ 263

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLWNKKLSGYL 308
           ++    + P+   V  ++ V+S   K+ + +   +    +  N    +++L N  L  Y+
Sbjct: 264 EMEMKDVKPN---VITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYV 320

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK--SGFYSA 366
           + G  + A + F  M     + D V++   L   A   N +    I        +  ++A
Sbjct: 321 KCGCINDAKDLFNKM----SEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNA 376

Query: 367 VIVG-------NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
           +I            ++++ +M      + D+ TL   L AS+ L   +     IHV+  K
Sbjct: 377 LISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQL-GAIDFGHWIHVYIKK 435

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           +D   +  ++T+L+D+Y + G++ +A  +F   +  D+  W+AMI    +      AL+L
Sbjct: 436 HDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDL 495

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGIL 534
           FS M  +  + + +T    + AC    ++ +G+Q+       Y +    +  +CV    +
Sbjct: 496 FSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV----V 551

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQM 584
           D++ + G +  A S    +P P   A W  ++  C  +G  +LA   Y  +
Sbjct: 552 DIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNL 602



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 47/328 (14%)

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV--KCGAMV 544
           G  ++   I   +  C   + LKQ   +HA+ +++    D   +S +L  Y    C  ++
Sbjct: 67  GNEVESTNILEFIDQCTNTMQLKQ---IHAHMLRTSRFCDPYTASKLLTAYAISSCSCLI 123

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY-HQMRLSGVVPDEFTFAILVKAS 603
            A+++FN IP P+   W T+I G   + +   +  I+ H +      P++FTF  L KA+
Sbjct: 124 YAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAA 183

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           S L  L  G  +H  +IK   SSD F+  SL++ Y   G  + A+ +F  M  ++ V WN
Sbjct: 184 SRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWN 243

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA-------------CSY---- 706
           AM+   A  G  ++ L LF++M+   V+P+ +T + VLSA             CSY    
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN 303

Query: 707 ------------------TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
                              G +++A + F+ M EK     ++  ++ ++D   + G   E
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEK-----DIVSWTTMLDGHAKLGNYDE 358

Query: 749 AGELILSMPFEASASMHRALLGACRVQG 776
           A  +  +MP + +A+ + AL+ A    G
Sbjct: 359 AHCIFDAMPHKWTAAWN-ALISAYEQNG 385


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 234/830 (28%), Positives = 379/830 (45%), Gaps = 136/830 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG--------------- 102
           ++L+  I+   L   K  HARI   +   D FL N+L+ +YS+C                
Sbjct: 10  NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69

Query: 103 ----------------SLVYARRLFDKMPDRDLISWNSILAAYAHSG-EGNAENVTEGFR 145
                           +L YA RLF +MP+R+ +S N+I+     +G E  A +  +   
Sbjct: 70  NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           ++ S++ S      +T A +   C     V      HG  LK+G   + +VS AL     
Sbjct: 130 VYESVKPS-----HITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNAL----- 179

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
                                     L  Y + G  E+ F +F                 
Sbjct: 180 --------------------------LCMYTKCGLNEDAFRVFE---------------- 197

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
             G++                         N V +   + G  Q       +E F  M+R
Sbjct: 198 --GIVE-----------------------PNEVTFTTMMGGLSQTNQVKEGLELFRLMLR 232

Query: 326 SNVQYDSVTFLVALAAVA------------GTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             +  DSV+    L   A            G      G+QIH   +K GF   + + NSL
Sbjct: 233 KGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSL 292

Query: 374 INMYSKMGCVCGLRT-----DQFTLASVLRASSSL------PEGLHLSKQIHVHAIKNDT 422
           ++MY+K G +          D+ ++ S     S         + L   +++     + D 
Sbjct: 293 LDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDD 352

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V    + TA +    ++G +     +F+      L +WNA++ GY  S +  +A+ELF  
Sbjct: 353 VTYINMLTACV----KSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRK 408

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M    +  D  T+A  + +C  L +L+ GKQ+HA + K GF  D+ V+S ++++Y KCG 
Sbjct: 409 MQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGK 468

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           M  ++ +F+ +   D V W +MI+G   N  E  AL+ + +MR  G  P EF+FA +  +
Sbjct: 469 MEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASS 528

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + L++L QG+QIHA +IK     + FVG SLV+MY KCG++  A   F  M  +N V W
Sbjct: 529 CAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTW 588

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           N M+ G A +G G E + L++DM + G +PD +TF+ VL+ACS++ LV E  E F  M +
Sbjct: 589 NEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQ 648

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
           K+ + P+++HY+ ++D LGR GR  E   ++ +MP++    +   +L +CRV  +    K
Sbjct: 649 KFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAK 708

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             AE+L  L P +S+ YVLL+N++++  +WDD    R  M    + KDP 
Sbjct: 709 RAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPG 758



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F +   F    S   + +I       S L  G+  HA+I+    + + F+ ++L+ 
Sbjct: 503 ALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVE 562

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CG +  AR  FD MP +++++WN ++  YAH+G G      E   L++ +  S   
Sbjct: 563 MYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYG-----LEAVSLYKDMISSGEK 617

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYAL-KIGLVWDEFVSGALVNIYSKFGKIREAKF 215
              +T   +L  C  S  V     +    L K  +V        +++   + G+  E + 
Sbjct: 618 PDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEV 677

Query: 216 LFDGMQER-DVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG-VI 270
           + D M  + D ++W+V+L   R +A     +       +LHR  L P + +   +L  + 
Sbjct: 678 ILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAE---ELHR--LNPRNSAPYVLLANMY 732

Query: 271 SDLGKRHEEQV 281
           S +G+  + QV
Sbjct: 733 SSMGRWDDAQV 743


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 210/724 (29%), Positives = 350/724 (48%), Gaps = 93/724 (12%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A+ L       +  +WN  + G++  G    A++ +  M    V+ D+ T+   + A  G
Sbjct: 79  ALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGG 138

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
             +L  G+++HG  +KSG    + +GNSLI MY+K+GC+                     
Sbjct: 139 LYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSM 198

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G++ D+F++  +L A S L   L   K+IH   +++ 
Sbjct: 199 ISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACS-LEGFLRNGKEIHCQMMRSR 257

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D  V T+L+D+Y + G M  AE LF+      +  WNAMI GY L+  S ++     
Sbjct: 258 LELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVR 317

Query: 482 HMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
            M   G+   D IT+   +  C  L  +  GK +H +A+++GF   L + + ++DMY +C
Sbjct: 318 KMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGEC 377

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G +  A+ +F  +   + ++W  MI+    NGE   A++++  +    + PD  T A ++
Sbjct: 378 GKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASIL 437

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A + L +L +  QIH  + KL   S+ FV  S+V MY KCGN+  A  +F +M  ++ +
Sbjct: 438 PAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVI 497

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WN +++  A HG G  +++LF +M+  G EP+  TF+ +L +CS  GLV+E +E F+ M
Sbjct: 498 SWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSM 557

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +  Y I P +EHY  ++D +GR G    A   I  MP   +A +  +LL A R +GD E 
Sbjct: 558 KRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVEL 617

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK----------- 829
            +  AE +++LE  ++  YVLLSN++A A +W+DV   +  MK++ ++K           
Sbjct: 618 AEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSS 677

Query: 830 ------------DPADLIFAKVEGLIKRIKEGGYVPD-TDFVLLDVEEEEKERALYYHSE 876
                       +  ++++  ++ + K+I E  YV   T F   D+E++    A   HS 
Sbjct: 678 KTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDLEKKRANSA-KSHSL 736

Query: 877 KLARAYGLISTPPSSVILSNKE-------PLYANR----------------FHHLRDGMC 913
           +LA  +GLIST   + +L  K          +A R                FHH   G C
Sbjct: 737 RLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGGHC 796

Query: 914 PCAD 917
            C D
Sbjct: 797 SCGD 800



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 251/551 (45%), Gaps = 82/551 (14%)

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y + G ++ A  LF+ M++ D  +W VM+R + +NG   +    +  +   G+  D+ + 
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 264 QCVL---GVISDL--GKRHEEQVQAYAIKLLLYNNNSNVVL------------------- 299
             V+   G + DL  G+R   +V    + L +Y  NS +++                   
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 300 -----WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
                WN  +SGY+ VGD   ++ CF  M  S ++ D  + +  L A +    L  G++I
Sbjct: 190 RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEI 249

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMG---------------------CVCG-------- 385
           H   ++S     V+V  SL++MY+K G                      + G        
Sbjct: 250 HCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQS 309

Query: 386 ---------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                          L  D  T+ ++L   + L E + L K +H  AI+N  +    + T
Sbjct: 310 FESFAYVRKMQEGGKLHPDWITMINLLPPCAQL-EAILLGKSVHGFAIRNGFLPHLVLET 368

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           AL+D+Y   G +  AE LF   +  +L +WNAMI  Y  +  + KA+ LF  +     + 
Sbjct: 369 ALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKP 428

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D  TIA+ + A   L  L++ +Q+H Y  K   + +  VS+ I+ MY KCG ++ A+ IF
Sbjct: 429 DATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIF 488

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   D ++W T+I     +G   +++ ++ +MR  G  P+  TF  L+ + S    + 
Sbjct: 489 DRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVN 548

Query: 611 QGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAM 665
           +G + + N +K D + +P  GI     ++D+  + GN++ A    ++M +  T  +W ++
Sbjct: 549 EGWE-YFNSMKRDYNINP--GIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSL 605

Query: 666 LVGLAQHGNGE 676
           L      G+ E
Sbjct: 606 LTASRNKGDVE 616



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 167/323 (51%), Gaps = 6/323 (1%)

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           T  +  Y   G M  A  LFEN    D   WN MI G++ +     A++ +  M   G R
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            D  T    +KACG L  L +G+++H   +KSG +LD+ + + ++ MY K G +  A+ +
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F ++P  D V+W +MISG V  G+   +LS + +M+ SG+  D F+   ++ A S    L
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
             G++IH  +++     D  V  SLVDMYAKCG ++ A  LF Q+  ++ V WNAM+ G 
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGY 303

Query: 670 AQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTG--LVSEAYENFHLMREKYGI 726
           + +    E+      M+  G + PD +T I +L  C+     L+ ++   F +   + G 
Sbjct: 304 SLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAI---RNGF 360

Query: 727 EPEVEHYSFLVDALGRAGRTKEA 749
            P +   + LVD  G  G+ K A
Sbjct: 361 LPHLVLETALVDMYGECGKLKPA 383



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/562 (21%), Positives = 235/562 (41%), Gaps = 89/562 (15%)

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           ++ Y   G +  A  LF+ M   D   WN ++  +  +G        +    +  +    
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGL-----FWDAVDFYHRMEFGG 121

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T   ++K C     +   E VHG  +K GL  D ++  +L+ +Y+K G I  A+
Sbjct: 122 VRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAE 181

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +F  M  RD+V W  M+  Y   G G      F ++  SG+  D  SV  +LG  S  G
Sbjct: 182 MVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEG 241

Query: 275 -KRHEEQVQA----------------------------YAIKLLLYNNNSNVVLWNKKLS 305
             R+ +++                              YA +L     + ++V WN  + 
Sbjct: 242 FLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIG 301

Query: 306 GYLQVGDNHGAIECFVNMIR----SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
           GY     N  + E F  + +      +  D +T +  L   A  + + LG+ +HG  +++
Sbjct: 302 GY---SLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRN 358

Query: 362 GFYSAVIVGNSLINMYSKMG------CVCG------------------------------ 385
           GF   +++  +L++MY + G      C+ G                              
Sbjct: 359 GFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLF 418

Query: 386 -------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                  L+ D  T+AS+L A + L   L  ++QIH +  K    +++FVS +++ +Y +
Sbjct: 419 QDLCNKTLKPDATTIASILPAYAELAS-LREAEQIHGYVTKLKLDSNTFVSNSIVFMYGK 477

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G++  A  +F+     D+ +WN +I  Y +      ++ELFS M   G   +  T  + 
Sbjct: 478 CGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSL 537

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-A 555
           + +C    ++ +G + +  +MK  + ++  +     ILD+  + G +  A++   ++P A
Sbjct: 538 LLSCSVAGLVNEGWE-YFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLA 596

Query: 556 PDDVAWTTMISGCVDNGEEDLA 577
           P    W ++++   + G+ +LA
Sbjct: 597 PTARIWGSLLTASRNKGDVELA 618



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 45/366 (12%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+  H +++ S    D ++ N+L+ MY++ G +  A  +F +MP RDL+SWNS+++
Sbjct: 141 DLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMIS 200

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y   G+G           FR ++ S     R ++  +L  C   G++   + +H   ++
Sbjct: 201 GYVSVGDG-----WRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMR 255

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             L  D  V  +LV++Y+K G++  A+ LFD + ++ +V W  M+  Y+ N    E F  
Sbjct: 256 SRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAY 315

Query: 248 FVDLHRSG-LCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIK-------------- 287
              +   G L PD  ++  +L   +      LGK     V  +AI+              
Sbjct: 316 VRKMQEGGKLHPDWITMINLLPPCAQLEAILLGK----SVHGFAIRNGFLPHLVLETALV 371

Query: 288 --------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                         L    N  N++ WN  ++ Y + G+N  A+  F ++    ++ D+ 
Sbjct: 372 DMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDAT 431

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQF 391
           T    L A A   +L   +QIHG   K    S   V NS++ MY K G +   R   D+ 
Sbjct: 432 TIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRM 491

Query: 392 TLASVL 397
           T   V+
Sbjct: 492 TFKDVI 497



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 5/199 (2%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           +LLGKS H   + +  +P   L   L+ MY  CG L  A  LF +M +R+LISWN+++A+
Sbjct: 345 ILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIAS 404

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  +GE       +   LF+ L          T+A +L        +  +E +HGY  K+
Sbjct: 405 YTKNGENR-----KAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKL 459

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            L  + FVS ++V +Y K G +  A+ +FD M  +DV+ W  ++ AYA +GFG     LF
Sbjct: 460 KLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELF 519

Query: 249 VDLHRSGLCPDDESVQCVL 267
            ++   G  P+  +   +L
Sbjct: 520 SEMREKGFEPNGSTFVSLL 538



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL      + L   +  H  +       + F++N+++ MY +CG+L+ AR +FD+M  +
Sbjct: 435 SILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFK 494

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D+ISWN+++ AYA  G G          LF  +RE     +  T   LL  C  +G V
Sbjct: 495 DVISWNTVIMAYAIHGFGRIS-----IELFSEMREKGFEPNGSTFVSLLLSCSVAGLV 547


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 228/744 (30%), Positives = 351/744 (47%), Gaps = 75/744 (10%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           L  L + C  +  V  +  VH   +  G+     +S  ++ +Y   G+I +   LF G++
Sbjct: 47  LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK------ 275
             + + W  M+R     G+ +     +  +  S + PD  +   V+     L        
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 166

Query: 276 -RHEEQVQAYAIKLL-------LYNNNS---------------NVVLWNKKLSGYLQVGD 312
             +  +   + + L        LY +N                + +LWN  L GY++ GD
Sbjct: 167 VHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGD 226

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
            + A+  F  M  S    +SVT+   L+  A      LG Q+HG  + SGF     V N+
Sbjct: 227 FNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANT 286

Query: 373 LINMYSKMGCV-------------------------------------------CGLRTD 389
           L+ MYSK G +                                            G++ D
Sbjct: 287 LVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346

Query: 390 QFTLASVLRASSSLPEG-LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
             T AS L   S L  G L   K++H + +++    D ++ +ALID+Y + G +  A  +
Sbjct: 347 SVTFASFL--PSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKI 404

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     D+A   AMI GY+L   +  A+  F  +   G   + +T+A+ + AC  L  L
Sbjct: 405 FQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAAL 464

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           K GK++H   +K   E  + V S I DMY KCG +  A   F  +   D + W +MIS  
Sbjct: 465 KLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSF 524

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG+ ++A+ ++ QM +SG   D  + +  + +++ L AL  G+++H  +I+   SSD 
Sbjct: 525 SQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDT 584

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           FV  +L+DMY+KCG +  A  +F  M  +N V WN+++     HG   E L LF +M   
Sbjct: 585 FVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRA 644

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           GV PD VTF+ ++SAC + GLV E    FH M  +YGI   +EHY+ +VD  GRAGR  E
Sbjct: 645 GVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHE 704

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I SMPF   A +   LLGACR+ G+ E  K  +  L+ L+P +S  YVLLSN+ A 
Sbjct: 705 AFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHAD 764

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA 832
           A +W  V   R  MK K V+K P 
Sbjct: 765 AGEWGSVLKVRRLMKEKGVQKIPG 788



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 169/707 (23%), Positives = 300/707 (42%), Gaps = 98/707 (13%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           ++Q  S+ R     S +   +  H +I+         L++ ++ +Y  CG +     LF 
Sbjct: 44  TTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFF 103

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL---FRSLRESITFTSRLTLAPLLKLC 169
            +   + + WN ++      G  +       F L   F+ L  +++   + T   ++K C
Sbjct: 104 GLELCNALPWNWMIRGLYMLGWFD-------FALLFYFKMLGSNVS-PDKYTFPYVIKAC 155

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
                V     VH  A  +G   D FV  AL+ +Y+  G I +A+ +FD + +RD +LW 
Sbjct: 156 GGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWN 215

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-------------- 275
           VML  Y ++G        F  +  S    +  +  C+L + +  GK              
Sbjct: 216 VMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGS 275

Query: 276 --RHEEQVQAYAIKLL-----------LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECF 320
               + QV    + +            L+N    ++ V WN  ++GY+Q G    A   F
Sbjct: 276 GFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLF 335

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             MI + V+ DSVTF   L ++  + +L   +++H   ++      V + ++LI++Y K 
Sbjct: 336 NAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKG 395

Query: 381 G-----------------CVC----------GLRTDQFTLASVLRASSSLPEGLHLS--- 410
           G                  VC          GL  D       L     +P  L ++   
Sbjct: 396 GDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVL 455

Query: 411 ------------KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
                       K++H   +K        V +A+ D+Y + G +  A   F      D  
Sbjct: 456 PACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSI 515

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            WN+MI  +  +     A++LF  M  SG + D +++++A+ +   L  L  GK+MH Y 
Sbjct: 516 CWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYV 575

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           +++ F  D  V+S ++DMY KCG +  A+ +FN +   ++V+W ++I+   ++G     L
Sbjct: 576 IRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECL 635

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----- 633
            ++H+M  +GV PD  TF +++  S+C  A   G  IH       C +  + GI      
Sbjct: 636 DLFHEMLRAGVHPDHVTFLVII--SACGHAGLVGEGIH----YFHCMTREY-GIGARMEH 688

Query: 634 ---LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
              +VD+Y + G + +A+   K M    +  +W  +L     HGN E
Sbjct: 689 YACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVE 735



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 259/566 (45%), Gaps = 82/566 (14%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAENVTEGFR 145
           D F+ + L+ +Y+  G +  ARR+FD++P RD I WN +L  Y  SG+  NA     G R
Sbjct: 179 DLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMR 238

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
              S+  S+T+T       +L +C + G       VHG  +  G  +D  V+  LV +YS
Sbjct: 239 TSYSMVNSVTYTC------ILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYS 292

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G + +A+ LF+ M + D V W  ++  Y +NGF +E   LF  +  +G+ PD  +   
Sbjct: 293 KCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 352

Query: 266 VLGVISDLGK-RHEEQVQAYAI----------------------------KLLLYNNNSN 296
            L  I + G  RH ++V +Y +                            K+   N   +
Sbjct: 353 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVD 412

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           V +    +SGY+  G N  AI  F  +I+  +  +S+T    L A A    L LG+++H 
Sbjct: 413 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHC 472

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------------CVC---------------- 384
             LK    + V VG+++ +MY+K G                 +C                
Sbjct: 473 DILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEM 532

Query: 385 -----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                      G + D  +L+S L ++++LP  L+  K++H + I+N   +D+FV++ALI
Sbjct: 533 AVDLFRQMGMSGAKFDSVSLSSALSSAANLP-ALYYGKEMHGYVIRNAFSSDTFVASALI 591

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D+Y + G +A A  +F    G +  +WN++I  Y     + + L+LF  M  +G   D +
Sbjct: 592 DMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHV 651

Query: 494 TIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           T    + ACG   ++ +G    H    + G    +   + ++D+Y + G + +A      
Sbjct: 652 TFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKS 711

Query: 553 IP-APDDVAWTTMISGCVDNGEEDLA 577
           +P  PD   W T++  C  +G  +LA
Sbjct: 712 MPFTPDAGVWGTLLGACRLHGNVELA 737


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 222/723 (30%), Positives = 340/723 (47%), Gaps = 93/723 (12%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +A  L       ++ L+N  + G+     +  +I  + ++++ N       F  A A  A
Sbjct: 58  HARALFFSVPKPDIFLFNVLIKGF-SFSPDASSISFYTHLLK-NTTLSPDNFTYAFAISA 115

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------- 384
             D+ NLG  +H   +  GF S + V ++L+++Y K   V                    
Sbjct: 116 SPDD-NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNT 174

Query: 385 ------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   G+R D  T+A+VL A + + E + +   I   A+K 
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQE-VKVGMGIQCLALKL 233

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               D +V T LI V+ +   +  A  LF      DL ++NA+I G+  +  +  A++ F
Sbjct: 234 GFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYF 293

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
             +  SG+R+   T+   +        L     +  + +KSG  L   VS+ +  +Y + 
Sbjct: 294 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRL 353

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             +  A+ +F++       AW  MISG   +G  ++A+S++ +M  +   P+  T   ++
Sbjct: 354 NEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSIL 413

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A + L AL  G+ +H  +   +   + +V  +L+DMYAKCGNI +A  LF     +NTV
Sbjct: 414 SACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTV 473

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WN M+ G   HG G+E LKLF +M   G +P SVTF+ VL ACS+ GLV E  E FH M
Sbjct: 474 TWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAM 533

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
             KY IEP  EHY+ +VD LGRAG+ ++A E I  MP E   ++   LLGAC +  DT  
Sbjct: 534 VNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNL 593

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
            +  +E+L  L+P +   YVLLSNI++    +    S R  +K++N+ K P         
Sbjct: 594 ARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNG 653

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                            I+AK+E L  +++E GY  +T   L DVEEEEKE     HSEK
Sbjct: 654 TPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEK 713

Query: 878 LARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCP 914
           LA A+GLI+T P + I   K                           ANRFHH +DG+C 
Sbjct: 714 LAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICS 773

Query: 915 CAD 917
           C D
Sbjct: 774 CGD 776



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 134/582 (23%), Positives = 251/582 (43%), Gaps = 93/582 (15%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           THA+++ +    D      L       G+  +AR LF  +P  D+  +N ++  ++ S +
Sbjct: 27  THAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPD 86

Query: 135 GNAENVTEGFRLFRSLR---ESITFTSRLTLAP--LLKLCLSSGYVWASETVHGYALKIG 189
             A +++    L ++     ++ T+   ++ +P   L +CL           H +A+  G
Sbjct: 87  --ASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCL-----------HAHAVVDG 133

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              + FV+ ALV++Y KF ++  A+ +FD M +RD VLW  M+     N   ++   +F 
Sbjct: 134 FDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFK 193

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-------------------- 288
           D+   G+  D  +V  VL  ++++ + +    +Q  A+KL                    
Sbjct: 194 DMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCE 253

Query: 289 ------LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                 LL+      ++V +N  +SG+   G+   A++ F  ++ S  +  S T +  + 
Sbjct: 254 DVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIP 313

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-------------------- 380
             +   +L+L   I G  +KSG      V  +L  +YS++                    
Sbjct: 314 VSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAA 373

Query: 381 --GCVCG----------------LRTDQF-----TLASVLRASSSLPEGLHLSKQIHVHA 417
               + G                + T +F     T+ S+L A + L   L   K +H   
Sbjct: 374 WNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL-GALSFGKSVHQLI 432

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
              +   + +VSTALID+Y + G+++EA  LF+     +  TWN MIFGY L     +AL
Sbjct: 433 KSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEAL 492

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDM 536
           +LF+ M   G +   +T  + + AC    ++++G ++ HA   K   E      + ++D+
Sbjct: 493 KLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDI 552

Query: 537 YVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
             + G +  A      +P  P    W T++  C+ + + +LA
Sbjct: 553 LGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLA 594



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 151/355 (42%), Gaps = 47/355 (13%)

Query: 63  AISTS-DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           AIS S D  LG   HA  +      + F+ + L+ +Y +   + YAR++FDKMPDRD + 
Sbjct: 112 AISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVL 171

Query: 122 WNSILAA------YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           WN+++        Y  S +   + V +G RL              T+A +L        V
Sbjct: 172 WNTMITGLVRNCCYDDSVQVFKDMVAQGVRL-----------DSTTVATVLPAVAEMQEV 220

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +   ALK+G  +D++V   L++++SK   +  A+ LF  +++ D+V +  ++  +
Sbjct: 221 KVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGF 280

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIK------- 287
           + NG  E     F +L  SG      ++  ++ V S  G  H    +Q + +K       
Sbjct: 281 SCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQP 340

Query: 288 ---------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                L   ++   V  WN  +SGY Q G    AI  F  M+ +
Sbjct: 341 SVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTT 400

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
               + VT    L+A A    L+ G+ +H           + V  +LI+MY+K G
Sbjct: 401 EFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCG 455



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 61/361 (16%)

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           + HA  +++G++ DL   + +       GA   A+++F  +P PD   +  +I G     
Sbjct: 26  ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKG-FSFS 84

Query: 573 EEDLALSIY-HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
            +  ++S Y H ++ + + PD FT+A  + AS        G  +HA+ +     S+ FV 
Sbjct: 85  PDASSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNLGMCLHAHAVVDGFDSNLFVA 141

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +LVD+Y K   +  A  +F +M  R+TVLWN M+ GL ++   ++++++F+DM A GV 
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201

Query: 692 PDSVTFIGVLSACS--------------------------YTGLVS--EAYENFHLMREK 723
            DS T   VL A +                           TGL+S     E+    R  
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261

Query: 724 YGI--EPEVEHYSFLVDALGRAGRTKEA----GELILSMPFEASASM-----------HR 766
           +G+  +P++  Y+ L+      G T+ A     EL++S    +S++M           H 
Sbjct: 262 FGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHL 321

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKN 826
            L  AC +QG      +  +    L+P  S+A   L+ I++  N+ D       E   K 
Sbjct: 322 HL--ACCIQG------FCVKSGTILQPSVSTA---LTTIYSRLNEIDLARQLFDESSEKT 370

Query: 827 V 827
           V
Sbjct: 371 V 371



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 9/206 (4%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFL 90
           L   ++SL   +  + F+ +  +    SIL        L  GKS H  I + +   + ++
Sbjct: 386 LTEMAISLFQEMMTTEFTPNPVTIT--SILSACAQLGALSFGKSVHQLIKSKNLEQNIYV 443

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           +  L+ MY++CG++  A +LFD   +++ ++WN+++  Y   G G+     E  +LF  +
Sbjct: 444 STALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGD-----EALKLFNEM 498

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
                  S +T   +L  C  +G V    E  H    K  +         +V+I  + G+
Sbjct: 499 LHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558

Query: 210 IREA-KFLFDGMQERDVVLWKVMLRA 234
           + +A +F+     E    +W  +L A
Sbjct: 559 LEKALEFIRKMPVEPGPAVWGTLLGA 584


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 221/692 (31%), Positives = 336/692 (48%), Gaps = 65/692 (9%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN-GFGEEVFHLFVDL 251
           +++   A ++   + G +  A+ L  GM  R+ V W  ++ A A + G G E   ++  +
Sbjct: 73  NDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRM 132

Query: 252 HRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQ----------------------- 282
              GL P   ++  VL     L     G+R H   V+                       
Sbjct: 133 RAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSV 192

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
             A++L       N V +   + G  Q G    A+  F  M RS V  D V+    L A 
Sbjct: 193 GDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGAC 252

Query: 343 A---GTD-----NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
           A    TD        LGQ IH   ++ GF S   VGNSLI+MY+K  CV         + 
Sbjct: 253 AQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTK--CV--------EMD 302

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-----------------TALIDVYC 437
             ++   SLP    +S  I +     +      V                  + L+    
Sbjct: 303 EAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCI 362

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           +   +  A  +F+      + TWN ++ GY         +ELF  M     + D  T+A 
Sbjct: 363 KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAV 422

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            + +C  L +L  G+Q+H+ +++     D+ V+SG++DMY KCG +  A+SIFN +   D
Sbjct: 423 ILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 482

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V W ++ISG   +     A   + QMR +G++P E ++A ++ + S L+++  GRQIHA
Sbjct: 483 VVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHA 542

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            ++K     + +VG +L+DMYAKCGN++DA + F  M M+N V WN M+ G AQ+G G++
Sbjct: 543 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDK 602

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            ++LFE M     +PD+VTFI VL+ CS++GLV +A   F+ M   YGI P  EHY+ L+
Sbjct: 603 AVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLI 662

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           DALGRAGR  E   LI  MP +    +   LL AC V  + E GK  AE L  ++P + S
Sbjct: 663 DALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPS 722

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            YVLLSNI+A+  +  D ++ R  M  + V K
Sbjct: 723 PYVLLSNIYASLGRHGDASAVRALMSNRGVVK 754



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 168/650 (25%), Positives = 282/650 (43%), Gaps = 76/650 (11%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS-GEGNAENVTEGF 144
           P+ +  N  ++   R G L  AR L   MP R+ +SWN++++A A S G+G      E  
Sbjct: 72  PNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGG-----EAV 126

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            ++  +R      +  TLA +L  C     +      HG A+K+GL  ++FV  AL+ +Y
Sbjct: 127 EMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMY 186

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           +K G + +A  LF GM   + V +  M+   A+ G  ++   LF  + RSG+  D  SV 
Sbjct: 187 TKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVS 246

Query: 265 CVLGVISDLGKRHEEQVQAY-------------------------------------AIK 287
            VLG  +          +A+                                     A+K
Sbjct: 247 SVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVK 306

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA------- 340
           +     +  +V WN  ++G+ Q G    A+E    M  +  + + VT+   LA       
Sbjct: 307 VFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARD 366

Query: 341 ---AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
              A A  D ++        TL SG Y         I ++ +M     ++ D+ TLA +L
Sbjct: 367 VHSARAMFDKISRPSVTTWNTLLSG-YCQEEQHQDTIELFRRMQHQ-NVQPDRTTLAVIL 424

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            + S L   L   +Q+H  +++     D FV++ L+D+Y + G +  A  +F      D+
Sbjct: 425 SSCSKLGI-LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDV 483

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
             WN++I G  + + + +A + F  M  +G    E + A+ + +C  L  +  G+Q+HA 
Sbjct: 484 VCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQ 543

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
            MK G++ ++ V S ++DMY KCG M DA+  F+ +   + VAW  MI G   NG  D A
Sbjct: 544 VMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKA 603

Query: 578 LSIYHQMRLSGVVPDEFTF-AILV---------KASSCLTALEQGRQIHANLIKLDCSSD 627
           + ++  M  +   PD  TF A+L          KA +   ++E    I        C   
Sbjct: 604 VELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTC--- 660

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
                 L+D   + G   +   L  +M  + + ++W  +L     H N E
Sbjct: 661 ------LIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAE 704



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/590 (22%), Positives = 261/590 (44%), Gaps = 74/590 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H   +      ++F+ N L+ MY++CGS+  A RLF  M   + +S+ +++   A 
Sbjct: 160 GRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQ 219

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC---LSSGYVWA-----SETVHG 183
           +G     ++ +  RLF  +  S      ++++ +L  C    ++ Y  A      + +H 
Sbjct: 220 TG-----SIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHA 274

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             ++ G   D+ V  +L+++Y+K  ++ EA  +F+ +    +V W +++  + + G   +
Sbjct: 275 LVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAK 334

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKK 303
              +   +  +G  P++ +   +L   S +  R     +A   K+    +  +V  WN  
Sbjct: 335 AVEVLSLMQEAGFEPNEVTYSNLLA--SCIKARDVHSARAMFDKI----SRPSVTTWNTL 388

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           LSGY Q   +   IE F  M   NVQ D  T  V L++ +    L+ G+Q+H  +++   
Sbjct: 389 LSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLL 448

Query: 364 YSAVIVGNSLINMYSKMG----------------CVC----------------------- 384
           ++ + V + L++MYSK G                 VC                       
Sbjct: 449 HNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQ 508

Query: 385 ----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
               G+   + + AS++ + S L    H  +QIH   +K+    + +V +ALID+Y + G
Sbjct: 509 MRENGIMPTESSYASMINSCSRLSSIPH-GRQIHAQVMKDGYDQNVYVGSALIDMYAKCG 567

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           +M +A   F+     ++  WN MI GY  +    KA+ELF +M T+ ++ D +T    + 
Sbjct: 568 NMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLT 627

Query: 501 ACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            C    ++ +         ++Y +    E   C    ++D   + G  V+ +++ + +P 
Sbjct: 628 GCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTC----LIDALGRAGRFVEVEALIHKMPC 683

Query: 556 PDD-VAWTTMISGCVDNGEEDLA-LSIYHQMRLSGVVPDEFTFAILVKAS 603
            DD + W  +++ CV +   +L   +  H  R+    P  +     + AS
Sbjct: 684 KDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYAS 733



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 7/185 (3%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S++      S +  G+  HA+++      + ++ + L+ MY++CG++  AR  F
Sbjct: 517 TESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFF 576

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D M  +++++WN ++  YA +G G+     +   LF  +  +      +T   +L  C  
Sbjct: 577 DTMMMKNIVAWNEMIHGYAQNGLGD-----KAVELFEYMLTTEQKPDAVTFIAVLTGCSH 631

Query: 172 SGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
           SG V  A    +      G++        L++   + G+  E + L   M  + D ++W+
Sbjct: 632 SGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWE 691

Query: 230 VMLRA 234
           V+L A
Sbjct: 692 VLLAA 696


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 348/746 (46%), Gaps = 123/746 (16%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N +++ ++N  + GY   G    AI  +V M+   +  D  TF   L+A +    L+ G 
Sbjct: 91  NMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGV 150

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------------- 383
           Q+HG  LK G    + V NSLI+ Y++ G V                             
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRD 210

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                          G+  +  T+  V+ A + L + L L K++  +  +      + + 
Sbjct: 211 LSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKD-LELGKKVCSYISELGMELSTIMV 269

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            AL+D+Y + G +  A  +F+     +L  +N ++  Y+    +   L +   M   G R
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            D++T+ + + AC  L  L  GK  HAY +++G E    +S+ I+DMY+KCG    A  +
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKV 389

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLA-------------------------------L 578
           F  +P    V W ++I+G V +G+ +LA                               +
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
            ++ +M+  G+  D  T   +  A   L AL+  + +   + K D   D  +G +LVDM+
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           ++CG+   A  +FK+M+ R+   W A +  +A  GN E  ++LF +M    V+PD V F+
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            +L+ACS+ G V +  + F  M + +GI P + HY  +VD LGRAG  +EA +LI SMP 
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPI 629

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E +  +  +LL ACR   + E   + AEKL  L P     +VLLSNI+A+A +W DV   
Sbjct: 630 EPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARV 689

Query: 819 RGEMKRKNVKKDPADLIFAKVEGLIK------------------------RIKEGGYVPD 854
           R +MK K V+K P      +V+GLI                         R+ E GYVPD
Sbjct: 690 RLQMKEKGVQKVPGSSSI-EVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPD 748

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI------------------ 893
           T  VLLDV+E+EKE  L  HSEKLA AYGLI+T    P  V+                  
Sbjct: 749 TTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSK 808

Query: 894 LSNKEPLYA--NRFHHLRDGMCPCAD 917
           L N+E      NR+H  ++G C C D
Sbjct: 809 LYNREITVRDNNRYHFFKEGFCSCRD 834



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 159/607 (26%), Positives = 267/607 (43%), Gaps = 66/607 (10%)

Query: 103 SLVYARRLF--DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           SL YAR  F  D      L  +N ++  YA +G G+     +   L+  +        + 
Sbjct: 77  SLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGD-----QAILLYVQMLVMGIVPDKY 131

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   LL  C     +     VHG  LK+GL  D FVS +L++ Y++ GK+   + LFDGM
Sbjct: 132 TFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGM 191

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
            ER+VV W  ++  Y+     +E   LF  +  +G+ P+  ++ CV+   +     +LGK
Sbjct: 192 LERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGK 251

Query: 276 RHEEQVQAYAIKL--LLYN----------------------NNSNVVLWNKKLSGYLQVG 311
           +    +    ++L  ++ N                       N N+V++N  +S Y+   
Sbjct: 252 KVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHE 311

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
                +     M++   + D VT L  +AA A   +L++G+  H   L++G      + N
Sbjct: 312 WASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISN 371

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           ++I+MY K    CG R       +  +    +P               N TV       +
Sbjct: 372 AIIDMYMK----CGKRE------AACKVFEHMP---------------NKTVV---TWNS 403

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI    R+G M  A  +F+     DL +WN MI   +  +   +A+ELF  M   G   D
Sbjct: 404 LIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGD 463

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            +T+     ACG L  L   K +  Y  K+   +DL + + ++DM+ +CG    A  +F 
Sbjct: 464 RVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFK 523

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +   D  AWT  I      G  + A+ ++++M    V PD+  F  L+ A S   +++Q
Sbjct: 524 RMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQ 583

Query: 612 GRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGL 669
           GRQ+  ++ K        V    +VD+  + G +E+A  L + M +  N V+W ++L   
Sbjct: 584 GRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAAC 643

Query: 670 AQHGNGE 676
            +H N E
Sbjct: 644 RKHKNVE 650



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 252/543 (46%), Gaps = 32/543 (5%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  +L      D F++N+L+  Y+ CG +   R+LFD M +R+++SW S++  Y  
Sbjct: 149 GVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGY-- 206

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           SG   ++   E   LF  + E+    + +T+  ++  C     +   + V  Y  ++G+ 
Sbjct: 207 SGRDLSK---EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGME 263

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               +  ALV++Y K G I  A+ +FD    +++V++  ++  Y  + +  +V  +  ++
Sbjct: 264 LSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEM 323

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--LLLYNNNSNVVLWNKKLSGYL 308
            + G  PD  ++   +   + LG     +   AY ++  L  ++N SN +     +  Y+
Sbjct: 324 LQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAI-----IDMYM 378

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS--- 365
           + G    A + F +M    V    VT+   +A +    ++ L  +I    L+    S   
Sbjct: 379 KCGKREAACKVFEHMPNKTV----VTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNT 434

Query: 366 --AVIVGNSL----INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
               +V  S+    I ++ +M    G+  D+ T+  +  A   L   L L+K +  +  K
Sbjct: 435 MIGALVQVSMFEEAIELFREMQNQ-GIPGDRVTMVGIASACGYLG-ALDLAKWVCTYIEK 492

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           ND   D  + TAL+D++ R G  + A ++F+  +  D++ W A I    +  N+  A+EL
Sbjct: 493 NDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIEL 552

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYV 538
           F+ M     + D++     + AC     + QG+Q+     K+ G    +     ++D+  
Sbjct: 553 FNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLG 612

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           + G + +A  +   +P  P+DV W ++++ C     +++ L+ Y   +L+ + P+     
Sbjct: 613 RAGLLEEAVDLIQSMPIEPNDVVWGSLLAAC--RKHKNVELAHYAAEKLTQLAPERVGIH 670

Query: 598 ILV 600
           +L+
Sbjct: 671 VLL 673



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 182/376 (48%), Gaps = 9/376 (2%)

Query: 411 KQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYL---FENKDG--FDLATWNAM 463
           KQ+H   +K   +     S    LI    + G++   +Y    F + DG    L  +N +
Sbjct: 42  KQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCL 101

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I GY  +    +A+ L+  M   G   D+ T    + AC  +L L +G Q+H   +K G 
Sbjct: 102 IRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGL 161

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E D+ VS+ ++  Y +CG +   + +F+ +   + V+WT++I+G         A+S++ Q
Sbjct: 162 EGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQ 221

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M  +GV P+  T   ++ A + L  LE G+++ + + +L       +  +LVDMY KCG+
Sbjct: 222 MGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGD 281

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           I  A  +F +   +N V++N ++     H    + L + ++M   G  PD VT +  ++A
Sbjct: 282 ICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAA 341

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           C+  G +S   ++ H    + G+E      + ++D   + G+ + A ++   MP +   +
Sbjct: 342 CAQLGDLSVG-KSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVT 400

Query: 764 MHRALLGACRVQGDTE 779
            +  + G  R  GD E
Sbjct: 401 WNSLIAGLVR-DGDME 415


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 205/586 (34%), Positives = 304/586 (51%), Gaps = 79/586 (13%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           + K++H H IK        +S  LI++Y + G + +A  LF      D  +W +++    
Sbjct: 21  IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANN 80

Query: 469 LSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            +N  H  L +F  M    G + D    A  VKAC  L  +KQGKQ+HA  + S    D 
Sbjct: 81  QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140

Query: 528 CVSSGILDMYVKCG---------------------AMV----------DAQSIFNDIPAP 556
            V S ++DMY KCG                     AM+          DA  +F  +P  
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGRQI 615
           + ++WT +ISG V +G    +  ++ +MR  G+ + D F  + ++ AS+ L  L  G+QI
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +I L   S  FV  +LVDMYAKC ++  A  +F +M  R+ V W +++VG AQHG  
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           EE L L+  M + G++P+ VTF+G++ ACS+ GLVS+    F+ M + YGI P ++HY+ 
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC 380

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           L+D L R+G  +EA  LI +MPF+   +   ALL AC    +T  G  VA+ L++L+P D
Sbjct: 381 LLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPED 440

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
            S Y+LLSNI+A+A  W+ V+  R  M    VKK+P                        
Sbjct: 441 PSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAK 500

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           + IF  +E L   +K+ GY+PDT  VL D+E++EKER L++HSE+LA AYGL+   P  V
Sbjct: 501 EEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMV 560

Query: 893 ---------------------ILSNKEPLY--ANRFHHLRDGMCPC 915
                                I+  +E +   ANR+HH +DG C C
Sbjct: 561 LHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSC 606



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 185/382 (48%), Gaps = 38/382 (9%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           W   L+   Q    H  +  F  M + + +Q D   F   + A A    +  G+Q+H T 
Sbjct: 72  WASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATF 131

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           + S      +V +SL++MY+K G                     LP+         +  +
Sbjct: 132 IVSPVSDDDVVKSSLVDMYAKCG---------------------LPD---------IGRV 161

Query: 419 KNDTVA--DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             D+++  +S   TA+I  Y ++G   +A  LF+     +L +W A+I G + S N   +
Sbjct: 162 VFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDS 221

Query: 477 LELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
             LF  M + G + +D   +++ + A   L +L  GKQ+H   +  G+E  L VS+ ++D
Sbjct: 222 FYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVD 281

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KC  ++ A+ IF  +   D V+WT++I G   +G  + ALS+Y++M  +G+ P+E T
Sbjct: 282 MYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVT 341

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQ 653
           F  L+ A S +  + +GR    ++IK D   +P +     L+D+ ++ G++E+A  L K 
Sbjct: 342 FVGLIYACSHVGLVSKGRYFFNSMIK-DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKA 400

Query: 654 MDMR-NTVLWNAMLVGLAQHGN 674
           M  + +   W A+L     H N
Sbjct: 401 MPFKPDEATWAALLSACNHHRN 422



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 136/637 (21%), Positives = 251/637 (39%), Gaps = 139/637 (21%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GK  H  I+ +     + L+NNL+ MY +CG +  A  LF+++P RD ISW SIL A  
Sbjct: 21  IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTA-- 78

Query: 131 HSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            + + N  ++T    +F ++ ++          A L+K C   G +   + VH   +   
Sbjct: 79  -NNQANLPHLT--LSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSP 135

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           +  D+ V  +LV++Y+K G     + +FD +  ++ + W  M+  YA++G   +   LF 
Sbjct: 136 VSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLF- 194

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
                                           Q   +K        N++ W   +SG +Q
Sbjct: 195 --------------------------------QKMPVK--------NLLSWTALISGLVQ 214

Query: 310 VGDNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
            G+   +   F+ M    +   D       + A A    L LG+QIH   +  G+ S++ 
Sbjct: 215 SGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLF 274

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           V N+L++MY+K              + VL A           K+I    ++ D V     
Sbjct: 275 VSNALVDMYAK-------------CSDVLAA-----------KKIFGRMVQRDIV----- 305

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
                                         +W ++I G      + +AL L++ M ++G 
Sbjct: 306 ------------------------------SWTSIIVGTAQHGLAEEALSLYNRMLSTGL 335

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQ 547
           + +E+T    + AC  + ++ +G+      +K  G    L   + +LD+  + G + +A+
Sbjct: 336 KPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAE 395

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSC 605
           ++   +P  PD+  W  ++S C  N   +  + I     L  + P D  T+ +L    + 
Sbjct: 396 NLIKAMPFKPDEATWAALLSAC--NHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYAS 453

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
               E   ++   +  ++   +P  G S +             +L K+  +         
Sbjct: 454 AAMWESVSKVRRLMAAMEVKKEP--GYSCI-------------VLGKESQV--------F 490

Query: 666 LVGLAQHGNGEETLKLFE----DMKAHGVEPDSVTFI 698
           L G   H   EE   L E    +MK  G  PD+ + +
Sbjct: 491 LAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVL 527



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 17/219 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SI+  + + + L LGK  H  ++        F++N L+ MY++C  ++ A+++F +M  R
Sbjct: 243 SIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQR 302

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSS 172
           D++SW SI+   A  G        E   L+  +  +    + +T   L+  C     +S 
Sbjct: 303 DIVSWTSIIVGTAQHGLAE-----EALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSK 357

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
           G  + +  +  Y +   L    +    L+++ S+ G + EA+ L   M  + D   W  +
Sbjct: 358 GRYFFNSMIKDYGINPSL--QHYT--CLLDLLSRSGHLEEAENLIKAMPFKPDEATWAAL 413

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           L A   N     +  + V  H   L P+D S   +L  I
Sbjct: 414 LSAC--NHHRNTLIGIRVADHLLSLKPEDPSTYILLSNI 450


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 217/708 (30%), Positives = 345/708 (48%), Gaps = 112/708 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN--VQYDSVTFLVALAAVAGTDNLNLGQ- 352
           + VL N  +S + +      A+  F +++ S+  ++ D  +F   L+AV    +L +   
Sbjct: 121 DTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHC 180

Query: 353 -QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
            Q+H    K G  + + V N+LI +Y K       R  +  L         +PE      
Sbjct: 181 TQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVL-------DEMPE------ 227

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILS 470
                        D    T ++  + R G +  A   FE  DG FD+  WNAMI GY+ S
Sbjct: 228 ------------KDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDV-VWNAMISGYVQS 274

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM----------- 519
               +A ELF  M +     DE T  + + AC        GK +H   +           
Sbjct: 275 GMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAA 334

Query: 520 ------------KSG--------FE----LDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
                       KSG        F+     D+   + IL  Y++ G + +A  IF ++P 
Sbjct: 335 LPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPY 394

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
             +++W  M+SG V  G  + AL +++QMR   V P ++T+A  V A   L AL+ G+Q+
Sbjct: 395 KSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQL 454

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           HA+L++    +    G +L+ MYA+CG ++DA ++F  M   ++V WNAM+  L QHG+G
Sbjct: 455 HAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHG 514

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E L+LF+ M A G+ PD ++F+ +L+AC++ GLV + ++ F  M   +GI P  +HY+ 
Sbjct: 515 REALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYAR 574

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           L+D LGRAGR  EA +LI +MPFE + ++  A+L  CR+ GD E G + A++L  + P  
Sbjct: 575 LIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEH 634

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------A 832
              Y+LLSN ++AA +W D    R  M+ + VKK+P                       A
Sbjct: 635 DGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDA 694

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS- 891
             ++  +E +  ++++ GYVPDT F L D+   EKE  L+ HSE+LA ++GL+  P  + 
Sbjct: 695 HEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGAT 754

Query: 892 -VILSN-------------------KEPLYAN--RFHHLRDGMCPCAD 917
             +L N                   +E +  +  RFHH +DG C C +
Sbjct: 755 VTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGN 802



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 130/348 (37%), Gaps = 99/348 (28%)

Query: 90  LTNNLMTMYSRC---GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAEN------- 139
           ++N L+ +Y +C   G    AR++ D+MP++D ++W +I+  +   G+ +A         
Sbjct: 198 VSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEID 257

Query: 140 -------------------VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
                                E F LFR +          T   LL  C ++G+    ++
Sbjct: 258 GEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKS 317

Query: 181 VHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAKFLFDGMQERDVVLWK---- 229
           VHG  +++     +FV       + ALV +YSK GKI  A  +FD M  +DVV W     
Sbjct: 318 VHGQFIRL---QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILS 374

Query: 230 ---------------------------VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
                                      VM+  Y   G  E+   LF  +    + P D +
Sbjct: 375 GYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYT 434

Query: 263 VQCVLGVISDLGK-RHEEQVQAYAIK----------------------------LLLYNN 293
               +    +LG  +H +Q+ A+ ++                            + L   
Sbjct: 435 YAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP 494

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           N + V WN  +S   Q G    A+E F  M+   +  D ++FL  L A
Sbjct: 495 NVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTA 542



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 30/247 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARI--LNSSQIPDRFL--TNNLMTMYSRCGSLVYARRLFDK 113
           S+L    +    L GKS H +   L    +P+  L   N L+T+YS+ G +  A ++FD 
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360

Query: 114 MPDRDLISWNSILAAYAHSG-EGNAENV-------------------------TEGFRLF 147
           M  +D++SWN+IL+ Y  SG   NA  +                          +  +LF
Sbjct: 361 MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLF 420

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +R         T A  +  C   G +   + +H + ++ G         AL+ +Y++ 
Sbjct: 421 NQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARC 480

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G +++A+ +F  M   D V W  M+ A  ++G G E   LF  +   G+ PD  S   +L
Sbjct: 481 GAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTIL 540

Query: 268 GVISDLG 274
              +  G
Sbjct: 541 TACNHAG 547



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 137/623 (21%), Positives = 222/623 (35%), Gaps = 192/623 (30%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSGEGNAENVTEG 143
           P      +L++ Y+  G L  +   FD +P   RD +  N++++A+A      A      
Sbjct: 87  PGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFA-----RASLAAPA 141

Query: 144 FRLFRSLRES--------ITFTSRLT-LAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
             +FRSL  S         +FTS L+ +  +  L +S         +H    K+G     
Sbjct: 142 VSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSH-----CTQLHCAVHKLGAGAVL 196

Query: 195 FVSGALVNIYSKF---GKIREAKFLFDGMQERDV-------------------------- 225
            VS AL+ +Y K    G  R+A+ + D M E+D                           
Sbjct: 197 SVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEI 256

Query: 226 -----VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEE 279
                V+W  M+  Y ++G   E F LF  +    + PD+ +   +L   ++ G   H +
Sbjct: 257 DGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGK 316

Query: 280 QVQAYAIKL---------LLYNNN-----------------------SNVVLWNKKLSGY 307
            V    I+L         L  NN                         +VV WN  LSGY
Sbjct: 317 SVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGY 376

Query: 308 LQVG--DN------------------------HG-----AIECFVNMIRSNVQYDSVTFL 336
           ++ G  DN                        HG     A++ F  M   +V+    T+ 
Sbjct: 377 IESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYA 436

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
            A+AA      L  G+Q+H   ++ GF ++   GN+L+ MY++ G V   R     + +V
Sbjct: 437 GAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNV 496

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                                       DS    A+I    ++G                
Sbjct: 497 ----------------------------DSVSWNAMISALGQHG---------------- 512

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
                          +  +ALELF  M   G   D I+  T + AC    ++  G Q   
Sbjct: 513 ---------------HGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYF- 556

Query: 517 YAMKSGFELDLCVSSG------ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
                  E D  +S G      ++D+  + G + +A+ +   +P  P    W  ++SGC 
Sbjct: 557 ----ESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCR 612

Query: 570 DNGEEDLALSIYHQMRLSGVVPD 592
            NG  D+ L  Y   +L  +VP+
Sbjct: 613 ING--DMELGAYAADQLFKMVPE 633



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 29/138 (21%)

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
           D     L L + H   LS   PD  T A+L +A                         P 
Sbjct: 56  DPSHPHLTLRLLHLYTLS---PDLATPAVLFRADP----------------------GPV 90

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
              SLV  YA  G + D+   F  + +  R+TVL NAM+   A+       + +F  + A
Sbjct: 91  AATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLA 150

Query: 688 H--GVEPDSVTFIGVLSA 703
               + PD  +F  +LSA
Sbjct: 151 SDDSLRPDDYSFTSLLSA 168


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 207/640 (32%), Positives = 321/640 (50%), Gaps = 75/640 (11%)

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
           R N+  ++  F   + +     +L  G+Q+H   + SGF S   + N L++MYSK+G   
Sbjct: 37  RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLG--- 93

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
                     S +     + +  ++S  I                  LI+ Y R G +  
Sbjct: 94  -------DFPSAVAVYGRMRKKNYMSSNI------------------LINGYVRAGDLVN 128

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+      L TWNAMI G I    + + L LF  MH  G   DE T+ +       
Sbjct: 129 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 188

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  +  G+Q+H Y +K G ELDL V+S +  MY++ G + D + +   +P  + VAW T+
Sbjct: 189 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 248

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G   NG  +  L +Y  M++SG  P++ TF  ++ + S L    QG+QIHA  IK+  
Sbjct: 249 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           SS   V  SL+ MY+KCG + DA   F + +  + V+W++M+     HG G+E ++LF  
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368

Query: 685 MKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           M     +E + V F+ +L ACS++GL  +  E F +M EKYG +P ++HY+ +VD LGRA
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G   +A  +I SMP +    + + LL AC +  + E  + V ++++ ++P DS+ YVLL+
Sbjct: 429 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 488

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKD-----------------------PADLIFAKVE 840
           N+ A+A +W DV+  R  M+ KNVKK+                        +  I++ ++
Sbjct: 489 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLK 548

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
            L   +K  GY PDT  VL D++EEEKE  L  HSEKLA A+ L+  P  + I       
Sbjct: 549 ELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLR 608

Query: 894 --------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                         + N+E      +RFHH  +G C C D
Sbjct: 609 VCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 648



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 176/404 (43%), Gaps = 67/404 (16%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS-- 99
            Q+   +  +++S +   ++   +   L  GK  H  ++ S    D+F+ N+LM+MYS  
Sbjct: 33  FQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKL 92

Query: 100 -----------------------------RCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
                                        R G LV AR++FD+MPDR L +WN+++A   
Sbjct: 93  GDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA--- 149

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G    E   EG  LFR +          TL  +         V   + +HGY +K GL
Sbjct: 150 --GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 207

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  V+ +L ++Y + GK+++ + +   M  R++V W  ++   A+NG  E V +L+  
Sbjct: 208 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 267

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYNN--- 293
           +  SG  P+  +   VL   SDL  R + +Q+ A AIK             + +Y+    
Sbjct: 268 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 327

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALA 340
                       + + V+W+  +S Y   G    AIE F  M  ++N++ + V FL  L 
Sbjct: 328 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 387

Query: 341 AVAGTDNLNLGQQIHGTTL-KSGFYSAVIVGNSLINMYSKMGCV 383
           A + +   + G ++    + K GF   +     ++++  + GC+
Sbjct: 388 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 431


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 204/582 (35%), Positives = 300/582 (51%), Gaps = 52/582 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  + FT   VL+  +S   G    + +H   ++    +D FV  AL+D+Y + G + +
Sbjct: 127 GVGVNNFTYPFVLKVCAS-ELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGD 185

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D+  W AMI  Y  +    KAL LF  M   G   DEIT  +   A G 
Sbjct: 186 AHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQ 245

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L   +    +H YA+ +GF  D+ V + I+ MY KCG +  A+ +F+ +   + ++W +M
Sbjct: 246 LGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSM 305

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +SG   NG    ALS+++QM+ S   P+  T  I+V A S L +   GR++H  +I    
Sbjct: 306 LSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM 365

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEETLKLF 682
             D  +  +++DMY KCG+++ A  +F   ++  R+   WN ++ G   HG+G+E L+LF
Sbjct: 366 DIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELF 425

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             M+  GVEP+ +TF  +LSACS+ GL+ E  + F  M  K  + PE++HY+ +VD LGR
Sbjct: 426 SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGR 484

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG   EA  LI  +P   S  +  ALL ACR+ G+TE G+  A  L  LEP  +  YVL+
Sbjct: 485 AGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLM 544

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADL------------------------IFAK 838
           SNI+AA+N+W +V   R  MK + +KK PA                          ++ K
Sbjct: 545 SNIYAASNKWKEVEMVRQNMKSRGLKK-PAAFSVIEFGTEVHGFHTADQSSPYYREVYRK 603

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           VE L   +K  GYVPD   VL DVE E+KE  L YHSEKLA A+G++       I   K 
Sbjct: 604 VESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKN 663

Query: 899 ---------------PLY--------ANRFHHLRDGMCPCAD 917
                           +Y         NRFHH + G C C D
Sbjct: 664 LRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGD 705



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 138/252 (54%), Gaps = 8/252 (3%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N M+  Y  +  S++A++L+ +M   G  ++  T    +K C   L    G+ +H   ++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL-ALS 579
           +GF  DL V + ++DMY KCG + DA  +F+ +   D V WT MI+   +  E  L AL 
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT-LYEQAERPLKALM 219

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVD 636
           ++ +M+  G + DE T    +  +S +  L  GR    +H   +      D  VG S+V 
Sbjct: 220 LFRKMQEEGFLGDEIT---AISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVG 276

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCGN+E A ++F +M+ RN + WN+ML G  Q+G   + L LF  M+A   +P+ VT
Sbjct: 277 MYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVT 336

Query: 697 FIGVLSACSYTG 708
            + ++SACSY G
Sbjct: 337 ALIMVSACSYLG 348



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 34/344 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+   S    + G+  H +++ +    D F+   L+ MY++CG +  A  +FD+M  RD
Sbjct: 138 VLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRD 197

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++ W +++  Y       AE   +   LFR ++E       +T   +       G    +
Sbjct: 198 VVCWTAMITLYE-----QAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA 252

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
            +VHGYA+  G + D  V  ++V +Y+K G +  A+ +FD M+ER+ + W  ML  Y +N
Sbjct: 253 ISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQN 312

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNV 297
           G   +   LF  +  S   P+  +   ++   S LG +H   ++  + I   +   + + 
Sbjct: 313 GRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM---DIDT 369

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            L N  +  Y++ GD   A+E F N         S   L++            G  +HG 
Sbjct: 370 TLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLIS------------GYGVHGH 417

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
                       G   + ++S+M  V G+  +  T  S+L A S
Sbjct: 418 ------------GKEALELFSRMQ-VEGVEPNDITFTSILSACS 448



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 125/526 (23%), Positives = 200/526 (38%), Gaps = 108/526 (20%)

Query: 94  LMTMYSRCGSLVYARRLFD----------KMPDRDLISWNSILAAYAHSGEGNAENVTEG 143
           L+ +YS+ G L  AR LFD          + P+  L   N++L AYA++G        E 
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLC--NTMLRAYANAGRS-----YEA 116

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
             L+  ++      +  T   +LK+C S       E VHG  ++ G   D FV  ALV++
Sbjct: 117 IDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDM 176

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y+K G+I +A  +FD M  RDVV W  M+  Y +     +   LF  +   G   D+ + 
Sbjct: 177 YAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITA 236

Query: 264 QCVLGVISDLGK-RHEEQVQAYAI-------------KLLLYNNNSNV------------ 297
             V   +  LG  R    V  YA+              + +Y    NV            
Sbjct: 237 ISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEE 296

Query: 298 ---VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
              + WN  LSGY Q G    A+  F  M  S    + VT L+ ++A +   + +LG+++
Sbjct: 297 RNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKL 356

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
           H   + S       + N++++MY K G                                 
Sbjct: 357 HNFVISSKMDIDTTLRNAIMDMYMKCG----------------------------DLDTA 388

Query: 415 VHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           V    N  + +  VS+   LI  Y  +G   EA  LF      +    N + F  ILS  
Sbjct: 389 VEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ-VEGVEPNDITFTSILSAC 447

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           SH  L                              + +G++  A   K     ++   + 
Sbjct: 448 SHAGL------------------------------IDEGRKCFADMTKLSVRPEMKHYAC 477

Query: 533 ILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           ++DM  + G + +A  +   IP+ P D  W  ++  C  +G  +L 
Sbjct: 478 MVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELG 523



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 533 ILDMYVKCGAMVDAQSIFND--------IPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           ++ +Y K G +  A+++F+           AP+     TM+    + G    A+ +Y  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           +  GV  + FT+  ++K  +       G  +H  +++    SD FV  +LVDMYAKCG I
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            DA+ +F +M +R+ V W AM+    Q     + L LF  M+  G   D +T I V SA 
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 705 SYTG 708
              G
Sbjct: 244 GQLG 247


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 198/587 (33%), Positives = 307/587 (52%), Gaps = 62/587 (10%)

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           K G +C L   Q    S+L+            +QIH H IK+       V   LI+ Y +
Sbjct: 53  KYGHICDLLLSQTRSRSLLKG-----------QQIHAHIIKSGLQVIPLVCHYLINFYSK 101

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DEITIA 496
                 +  +FE  +     TW+++I  +  +     A++ F  M   GE L  D+    
Sbjct: 102 TQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRM--IGENLCPDDHIFP 159

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           +A KAC  L     GK +H   +K+G+++D+ V S ++DMY KCG + +A+++F+++P  
Sbjct: 160 SATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHR 219

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + V+W+ MI G    GE + A+ ++ +  L G+  ++FT + +++     T LE G+QIH
Sbjct: 220 NVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIH 279

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
               K       FVG SL+ +Y+KCG IE AY +F ++ ++N  +WNAML+  AQH + +
Sbjct: 280 GLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTK 339

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E   LF  M+  G+ P+ +TF+ VL ACS+ GLV E  + F LM+ KY IEP  +HY+ +
Sbjct: 340 EAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMK-KYEIEPGTQHYASM 398

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG+ +EA  +I  MP E + S+  A +  CR+ G+T+   + A+K+  L    S
Sbjct: 399 VDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSS 458

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
             +V+LSN +AAA +++D   AR  ++ + VKK+                          
Sbjct: 459 GLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMK 518

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I+ K+E L + ++  GYV DT FVL +V  EEK + + YHSE+LA A+GLIS P    I
Sbjct: 519 EIYQKLEDLGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPI 578

Query: 894 ---------------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                                LS +  +    NRFH   DG C CAD
Sbjct: 579 RIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCAD 625



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 7/205 (3%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GKS H  ++ +    D F+ ++L+ MY++CG +  AR +FD+MP R+++SW+ ++  Y 
Sbjct: 173 VGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYT 232

Query: 131 HSGEGNAENVTEGFRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             GE       E  RLF+ +L E +      TL+ ++++C S+  +   + +HG   K  
Sbjct: 233 QLGEHE-----EAMRLFKEALLEGLDVND-FTLSSVIRVCGSATLLELGKQIHGLCFKTS 286

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
                FV  +L+++YSK G I  A  +FD +  +++ +W  ML A A++   +E F LF 
Sbjct: 287 YDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFT 346

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG 274
            +  +G+ P+  +  CVL   S  G
Sbjct: 347 KMENAGMRPNFITFLCVLYACSHAG 371



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 165/429 (38%), Gaps = 89/429 (20%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H + +K GL     V   L+N YSK      +  +F+  + +    W  ++ ++A+N
Sbjct: 74  QQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQN 133

Query: 239 GFGEEVFHLFVDLHRSGLCPDDE-----SVQCVLGVISDLGKRHEEQV--QAYAIKLLLY 291
                    F  +    LCPDD      +  C +    D+GK     V    Y + + + 
Sbjct: 134 EEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVG 193

Query: 292 NN----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
           ++                      + NVV W+  + GY Q+G++  A+  F   +   + 
Sbjct: 194 SSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLD 253

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            +  T    +        L LG+QIHG   K+ +  +  VG+SLI++YSK    CGL   
Sbjct: 254 VNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSK----CGL--- 306

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
              +    R    +P             IKN                             
Sbjct: 307 ---IEGAYRVFDEVP-------------IKN----------------------------- 321

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                  L  WNAM+       ++ +A +LF+ M  +G R + IT    + AC    +++
Sbjct: 322 -------LGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVE 374

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
           +GK+  A   K   E      + ++D+  + G + +A S+   +P  P +  W   I+GC
Sbjct: 375 EGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGC 434

Query: 569 VDNGEEDLA 577
             +G  DLA
Sbjct: 435 RIHGNTDLA 443



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/377 (23%), Positives = 155/377 (41%), Gaps = 52/377 (13%)

Query: 1   MYTQLQANL-KPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSI 59
           +Y  LQ  L K +H++  +   S +++          ++ P    + F S         +
Sbjct: 10  LYVPLQNILTKSQHQNPIIKTQSLSQEG---------TITPQNSPNRFCSEKKYGHICDL 60

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L     +  LL G+  HA I+ S       + + L+  YS+    + + ++F++   +  
Sbjct: 61  LLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSS 120

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
            +W+S+++++A     N E V       R + E++     +      K C   G     +
Sbjct: 121 TTWSSVISSFAQ----NEEPVLAIQYFCRMIGENLCPDDHI-FPSATKACAILGRCDVGK 175

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
           +VH   +K G   D FV  +LV++Y+K G I+EA+ +FD M  R+VV W  M+  Y + G
Sbjct: 176 SVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLG 235

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK------- 287
             EE   LF +    GL  +D ++  V+ V       +LGK    Q+     K       
Sbjct: 236 EHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGK----QIHGLCFKTSYDLSG 291

Query: 288 ------LLLYNNN---------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                 + LY+                  N+ +WN  L    Q      A + F  M  +
Sbjct: 292 FVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENA 351

Query: 327 NVQYDSVTFLVALAAVA 343
            ++ + +TFL  L A +
Sbjct: 352 GMRPNFITFLCVLYACS 368



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 5/163 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   S + L LGK  H     +S     F+ ++L+++YS+CG +  A R+FD++P +
Sbjct: 261 SVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIK 320

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L  WN++L A A        +  E F LF  +  +    + +T   +L  C  +G V  
Sbjct: 321 NLGMWNAMLIACAQHA-----HTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEE 375

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            +       K  +        ++V++  + GK++EA  +  GM
Sbjct: 376 GKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGM 418


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/582 (33%), Positives = 318/582 (54%), Gaps = 47/582 (8%)

Query: 296 NVVLWNKKLSGYLQVG---DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           +VV WN  ++GY Q G    ++  ++ F  M   ++  ++ T      A +   +  +G+
Sbjct: 79  DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-CGLRT-------DQFTLASVLRAS---- 400
           Q H   +K   +  + V  SL+ MY K G V  GL+        + +T ++++       
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198

Query: 401 ------------------------------SSLPEGLH--LSKQIHVHAIKNDTVADSFV 428
                                         SSL   ++  L +QIH   IKN  +    +
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S AL+ +Y +  S+ EA  +F++    +  TW+AM+ GY  +  S +A++LFS M ++G 
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           +  E TI   + AC  +  L++GKQ+H++ +K GFE  L  ++ ++DMY K G + DA+ 
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
            F+ +   D   WT++ISG V N + + AL +Y +M+ +G++P++ T A ++KA S L  
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE G+Q+H + IK     +  +G +L  MY+KCG++ED  ++F++   ++ V WNAM+ G
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
           L+ +G G+E L+LFE+M A G+EPD VTF+ ++SACS+ G V   +  F++M ++ G++P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +V+HY+ +VD L RAG+ KEA E I S   +    + R LL AC+  G  E G +  EKL
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           MAL   +SS YV LS I+ A  +  DV      M+   V K+
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 168/636 (26%), Positives = 290/636 (45%), Gaps = 88/636 (13%)

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           A   VHG  ++ G       +  LVN Y+K GK+ +A  +F+ +  +DVV W  ++  Y+
Sbjct: 32  AGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYS 91

Query: 237 ENG---FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI------- 286
           +NG       V  LF ++    + P+  ++  +    S L +      QA+A+       
Sbjct: 92  QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL-QSSTVGRQAHALVVKMSSF 150

Query: 287 -----------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                                  K+  Y    N   W+  +SGY   G    AI+ F   
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210

Query: 324 IRSNVQ-YDS-VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-- 379
           +R   +  DS   F   L+++A T  + LG+QIH  T+K+G    V + N+L+ MYSK  
Sbjct: 211 LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCE 270

Query: 380 -MGCVC----------------------------------------GLRTDQFTLASVLR 398
            +   C                                        G++  ++T+  VL 
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A S +   L   KQ+H   +K       F +TAL+D+Y + G +A+A   F+     D+A
Sbjct: 331 ACSDICY-LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVA 389

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            W ++I GY+ ++++ +AL L+  M T+G   ++ T+A+ +KAC  L  L+ GKQ+H + 
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           +K GF L++ + S +  MY KCG++ D   +F   P  D V+W  MISG   NG+ D AL
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLV 635
            ++ +M   G+ PD+ TF  ++ A S    +E+G     + ++ I LD   D +    +V
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA--CMV 567

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           D+ ++ G +++A    +  ++ + + LW  +L     HG  E  +   E + A G   +S
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG-SRES 626

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            T++ +    +  G + +    +  MR   G+  EV
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRAN-GVSKEV 661



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 266/633 (42%), Gaps = 85/633 (13%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L H     +L+ G++ H +I+ +         N L+  Y++CG L  A  +F+ +  +D+
Sbjct: 21  LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           +SWNS++  Y+ +G G + + T   +LFR +R      +  TLA + K   S        
Sbjct: 81  VSWNSLITGYSQNG-GISSSYTV-MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
             H   +K+    D +V  +LV +Y K G + +   +F  M ER+   W  M+  YA  G
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198

Query: 240 FGEE---VFHLFVDLHRSGLCPD------------------DESVQCVLGVISDLG--KR 276
             EE   VF+LF+     G   D                     + C+      LG    
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258

Query: 277 HEEQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               V  Y        A K+   + + N + W+  ++GY Q G++  A++ F  M  + +
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
           +    T +  L A +    L  G+Q+H   LK GF   +    +L++MY+K GC+     
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378

Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
                                                  G+  +  T+ASVL+A SSL  
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L L KQ+H H IK+    +  + +AL  +Y + GS+ +   +F      D+ +WNAMI 
Sbjct: 439 -LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           G   +    +ALELF  M   G   D++T    + AC     +++G   +   M     L
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGL 556

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYH 582
           D  V   + ++D+  + G + +A+           +  W  ++S C ++G+ +L   +Y 
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG--VYA 614

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
             +L  +   E +    V+ S   TAL + R +
Sbjct: 615 GEKLMALGSRESS--TYVQLSGIYTALGRMRDV 645



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 160/322 (49%), Gaps = 8/322 (2%)

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS---NNSHKALELFSHMHT 485
           +  L++ Y + G +A+A  +F      D+ +WN++I GY  +   ++S+  ++LF  M  
Sbjct: 52  ANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRA 111

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
                +  T+A   KA   L     G+Q HA  +K     D+ V + ++ MY K G + D
Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH---QMRLSGVVPDEFTFAILVKA 602
              +F  +P  +   W+TM+SG    G  + A+ +++   + +  G   D + F  ++ +
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSS 230

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            +    +  GRQIH   IK        +  +LV MY+KC ++ +A  +F     RN++ W
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           +AM+ G +Q+G   E +KLF  M + G++P   T +GVL+ACS    + E  +  H    
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLL 349

Query: 723 KYGIEPEVEHYSFLVDALGRAG 744
           K G E  +   + LVD   +AG
Sbjct: 350 KLGFERHLFATTALVDMYAKAG 371



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 152/323 (47%), Gaps = 34/323 (10%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S S   + ++L    +T  + LG+  H   + +  +    L+N L+TMYS+C SL  A +
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +FD   DR+ I+W++++  Y+ +GE       E  +LF  +  +    S  T+  +L  C
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGES-----LEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
               Y+   + +H + LK+G     F + ALV++Y+K G + +A+  FD +QERDV LW 
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK- 287
            ++  Y +N   EE   L+  +  +G+ P+D ++  VL   S L      +QV  + IK 
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452

Query: 288 ---------------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                                      +     N +VV WN  +SG    G    A+E F
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512

Query: 321 VNMIRSNVQYDSVTFLVALAAVA 343
             M+   ++ D VTF+  ++A +
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACS 535



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 10/211 (4%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L  G+ +H   +++G    +  ++ +++ Y KCG +  A SIFN I   D V+W ++I+G
Sbjct: 30  LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89

Query: 568 CVDNG---EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
              NG        + ++ +MR   ++P+ +T A + KA S L +   GRQ HA ++K+  
Sbjct: 90  YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK---L 681
             D +V  SLV MY K G +ED   +F  M  RNT  W+ M+ G A  G  EE +K   L
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209

Query: 682 FEDMKAHGVEPDSVTFIGVLS---ACSYTGL 709
           F   K  G + D V F  VLS   A  Y GL
Sbjct: 210 FLREKEEGSDSDYV-FTAVLSSLAATIYVGL 239


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 202/599 (33%), Positives = 302/599 (50%), Gaps = 48/599 (8%)

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           A + G+  +  + +M     +R D  TLASVL A++ +     + + +H    K      
Sbjct: 197 AGLSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEV-ANTTMGRCVHAFGEKCGLAQH 255

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
             V T LI +Y + G M  A +LF+  +G DL T+NA+I GY ++     ++ELF  +  
Sbjct: 256 EHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVG 315

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G R    T+   +              +HA+ +K+G + +  VS+ +  +Y +   M  
Sbjct: 316 MGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDS 375

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+  F+ +P     +W  MISG   NG  ++A++++ QM+   V P+  T +  + A + 
Sbjct: 376 ARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQ 435

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L AL  G+ +H  +       + +V  +L+DMY KCG+I +A  +F  MD +N V WN M
Sbjct: 436 LGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVM 495

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G   HG G E LKL++DM    + P S TF+ VL ACS+ GLV E    F  M   YG
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYG 555

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA-SASMHRALLGACRVQGDTETGKWV 784
           I P +EH + +VD LGRAG+ KEA ELI   P  A    +  ALLGAC V  D +  K  
Sbjct: 556 ITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLA 615

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------- 831
           ++KL  LEP ++  YVLLSN++ +  Q+ +    R E K + + K P             
Sbjct: 616 SQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHV 675

Query: 832 ----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
                     +D I+  +E L  ++ E GY PDT+  L DVEEEEKE  +  HSEKLA A
Sbjct: 676 FMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIA 735

Query: 882 YGLISTPP-------------------SSVILSNKEPLY----ANRFHHLRDGMCPCAD 917
           +GL++T P                   + +I    + L     A+RFHH RDG+C C D
Sbjct: 736 FGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGD 794



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 164/347 (47%), Gaps = 6/347 (1%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           + +H  A+ +   AD+FV++AL  +Y       +A  +F+     D   WN ++ G    
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL--- 199

Query: 471 NNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
            +  +ALE F  M  +G  R D  T+A+ + A   +     G+ +HA+  K G      V
Sbjct: 200 -SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            +G++ +Y KCG M  A+ +F+ +  PD V +  +ISG   NG    ++ ++ ++   G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P   T   L+   S          +HA+++K    ++  V  +L  +Y +  +++ A  
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
            F  M  +    WNAM+ G AQ+G  E  + LF+ M+A  V P+ +T    LSAC+  G 
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           +S   +  H +     +E  V   + L+D   + G   EA  +  SM
Sbjct: 439 LSLG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 146/339 (43%), Gaps = 45/339 (13%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S+   S+L  A   ++  +G+  HA            +   L+++Y++CG +  AR LFD
Sbjct: 221 STTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFD 280

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +M   DL+++N++++ Y+ +G      V     LF+ L       S  TL  L+ +    
Sbjct: 281 RMEGPDLVTYNALISGYSING-----MVGSSVELFKELVGMGLRPSSSTLVALIPVHSPF 335

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G+   +  +H + +K GL  +  VS AL  +Y +F  +  A+  FD M E+ +  W  M+
Sbjct: 336 GHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMI 395

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK------------RHEEQ 280
             YA+NG  E    LF  +    + P+  ++   L   + LG               + +
Sbjct: 396 SGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLE 455

Query: 281 VQAYAIKLLL-----------------YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +  Y +  L+                   +N NVV WN  +SGY   G    A++ + +M
Sbjct: 456 LNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDM 515

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
           + +++   S TFL  L A +           HG  +K G
Sbjct: 516 MDAHLHPTSSTFLSVLYACS-----------HGGLVKEG 543



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 51/357 (14%)

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           + +HA A+ SGF  D  V+S +  +Y       DA+ +F+ +P+PD V W T+++G   +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL--S 200

Query: 572 GEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           G E  AL  + +M  +G V PD  T A ++ A++ +     GR +HA   K   +    V
Sbjct: 201 GSE--ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
              L+ +YAKCG++E A  LF +M+  + V +NA++ G + +G    +++LF+++   G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 691 EPDSVTFIGV-----------LSACSYTGLVSEA--------------YENFHLM---RE 722
            P S T + +           L+ C +  +V                 Y  F+ M   R 
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 723 KYGIEPE--VEHYSFLVDALGRAGRTKEAGELILSM--------PFEASASMHRALLGAC 772
            +   PE  +E ++ ++    + G T+ A  L   M        P   S++     L AC
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSA-----LSAC 433

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVL--LSNIFAAANQWDDVTSARGEMKRKNV 827
              G    GKWV  K++A E  + + YV+  L +++       +       M  KNV
Sbjct: 434 AQLGALSLGKWV-HKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNV 489



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 174/424 (41%), Gaps = 56/424 (13%)

Query: 7   ANLKPRHKHTYVIFSSFTK-DTY------RNLPSFSLSLLPFLQKSHFSSS-SSSSQWFS 58
           A+L+    H   ++ +F + D +      R+LP+    LL F     FS + +++S   S
Sbjct: 68  ASLRSPPAHLLRLYRAFPRPDRFLRNSLLRSLPTLRADLL-FPSPDSFSFAFAATSLASS 126

Query: 59  ILRHAISTSDLLLG--KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
             R  IS         +  HA  + S    D F+ + L  +Y        AR++FD +P 
Sbjct: 127 CSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPS 186

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFR--SLRESITFTSRLTLAPLLKLCLSSGY 174
            D + WN++LA     G   +E +    R+    S+R   T     TLA +L        
Sbjct: 187 PDTVLWNTLLA-----GLSGSEALEAFVRMAGAGSVRPDST-----TLASVLPAAAEVAN 236

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
                 VH +  K GL   E V   L+++Y+K G +  A+ LFD M+  D+V +  ++  
Sbjct: 237 TTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISG 296

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ---VQAYAIKLLLY 291
           Y+ NG       LF +L   GL P   ++  ++ V S  G  HE     + A+ +K  L 
Sbjct: 297 YSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFG--HEPLAGCLHAHVVKAGLD 354

Query: 292 NN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            N                               +  WN  +SGY Q G    A+  F  M
Sbjct: 355 ANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQM 414

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              NV+ + +T   AL+A A    L+LG+ +H           V V  +LI+MY K G +
Sbjct: 415 QALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSI 474

Query: 384 CGLR 387
              R
Sbjct: 475 AEAR 478



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 16/173 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H  I N     + ++   L+ MY +CGS+  AR +FD M +++++SWN +++ 
Sbjct: 439 LSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISG 498

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV-----HG 183
           Y   G+G      E  +L++ + ++    +  T   +L  C   G V    TV       
Sbjct: 499 YGLHGQG-----AEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSD 553

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV--VLWKVMLRA 234
           Y +  G+   E  +  +V++  + G+++EA  L     +  V   +W  +L A
Sbjct: 554 YGITPGI---EHCT-CMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGA 602


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 235/817 (28%), Positives = 405/817 (49%), Gaps = 78/817 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+  ++ S +  G   H   L    +  + L   L+ +Y++ G+L Y  +LF +M  R
Sbjct: 44  ALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQR 103

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE-SITFTSRLTLAPLLKLCLSSGYVW 176
           D + WN +L+  A    G   +  E  RLFR++   +    + +T+A +L +C +     
Sbjct: 104 DPVIWNIVLSGLA----GFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVC-ARLRED 158

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI-REAKFLFDGMQERDVVLWKVMLRAY 235
           A ++VH Y +K GL        AL+++Y+K G +  +A   F+ ++ +DVV W  ++  +
Sbjct: 159 AGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGF 218

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL----GKRHEEQVQAYAIKLLLY 291
           +EN F EE F LF  + +  + P+  ++  +L V + L    G R+ ++V  + ++ +  
Sbjct: 219 SENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMEL 278

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
             + +V+  N  +S YL++G    A   F NM   +        LV+  A+        G
Sbjct: 279 VEDVSVI--NSLMSFYLRIGQMEKAEFLFRNMKSRD--------LVSWNAIIA------G 322

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
              +G  LK+            + ++S+   +  ++ D  TL SVL A + +   L ++K
Sbjct: 323 YASNGEWLKA------------LELFSEFISLETIKPDSVTLVSVLPACAHV-HNLQVAK 369

Query: 412 QIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            IH + I++  +  D+ V  AL+  Y +      A   F      DL +WNA++  +  S
Sbjct: 370 GIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTES 429

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF---ELDL 527
                 + L   M   G R D ITI T ++    +  +K+ K+ H+Y+++ G    +   
Sbjct: 430 GCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGP 489

Query: 528 CVSSGILDMYVKCGAMV--------------------------------DAQSIFNDIPA 555
            + +G+LD Y KCG M                                 DA +IFN +  
Sbjct: 490 TLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSE 549

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D   W  M+    +N   D ALS++H+++  G+ PD  T   ++ A + + ++   RQ 
Sbjct: 550 TDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQC 609

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +I+  C +D  +  + +DMY+KCG++  AY LF     ++ V++ AM+ G A HG G
Sbjct: 610 HGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 668

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           EE L++F  M   GV+PD V    VL ACS+ GLV E ++ F+ + + +G +P +E Y+ 
Sbjct: 669 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYAC 728

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD L R GR K+A   +  MP EA+A++   LLGACR   + E G+ VA+ L  +E  +
Sbjct: 729 VVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 788

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
              YV++SN++AA  +WD V   R  M+ + +KK PA
Sbjct: 789 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKK-PA 824



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 4/222 (1%)

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G + +   +A  +K+C  +  ++ G  +H YA+K G      +  G+L++Y K GA+   
Sbjct: 34  GYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 93

Query: 547 QSIFNDIPAPDDVAWTTMISGCVD-NGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASS 604
             +F ++   D V W  ++SG       E   + ++  M + +   P+  T AI++   +
Sbjct: 94  NKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA 153

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI-EDAYILFKQMDMRNTVLWN 663
            L   + G+ +H+ +IK    S    G +L+ MYAKCG +  DAY  F +++ ++ V WN
Sbjct: 154 RLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWN 212

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           A++ G +++   EE  KLF  M    ++P+  T   +L  C+
Sbjct: 213 AVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCA 254



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 6/176 (3%)

Query: 573 EEDLALSIY-HQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
             D ALS++  ++R S G  P+    A L+K+   ++A+  G  +H   +KL   S   +
Sbjct: 17  RHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSL 76

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE-ETLKLFEDMK-AH 688
              L+++YAK G ++    LF +MD R+ V+WN +L GLA   + E E ++LF  M   +
Sbjct: 77  CKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVN 136

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             +P+SVT   VL  C+   L  +A ++ H    K G+E      + L+    + G
Sbjct: 137 EAKPNSVTIAIVLPVCAR--LREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCG 190


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 196/574 (34%), Positives = 303/574 (52%), Gaps = 85/574 (14%)

Query: 425 DSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
           D F ++ ++  +C    +GS+  A  +F         T N++I GY   N   +A+  + 
Sbjct: 9   DPFSASKIV-AFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQ 67

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M   G   D  T  +  K+CG   +L +GKQ+H ++ K GF  D  + + +++MY  CG
Sbjct: 68  LMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCG 124

Query: 542 AMVDAQSIFN--------------------DIP------------APDDVAWTTMISGCV 569
            +V A+ +F+                    D+P            A +   W  MI+G V
Sbjct: 125 CLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHV 184

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
           ++ + + ALS++++M+LSGV  D+ T A L+ A + L ALE G+ +H  + K     D  
Sbjct: 185 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 244

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +G +LVDMYAKCG+IE A  +F++M  ++ + W A++VGLA  G G + L+LF +M+   
Sbjct: 245 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 304

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           V+PD++TF+GVL+ACS+ GLV+E    F+ M  KYGI+P +EHY  +VD LGRAGR  EA
Sbjct: 305 VKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            +LI +MP      +   LL ACR+ G+    +  A++L+ L+P +   YVLLSNI+++ 
Sbjct: 365 EDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSM 424

Query: 810 NQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRI 846
             W+     R  M  +N+KK P                       +  I+  ++ +++R+
Sbjct: 425 KNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRL 484

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
           K  GYVPD   VL D++E+EKE  L  HSEKLA A+GL+ST P + I             
Sbjct: 485 KSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCH 544

Query: 894 --------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                   + N+E +    NRFHH   G C C D
Sbjct: 545 SAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRD 578



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 46/328 (14%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D+FT  S+ ++   L EG    KQ+H H+ K    +D+++   L+++Y   G +  
Sbjct: 73  GLDPDRFTFPSLFKSCGVLCEG----KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVS 128

Query: 445 AEYLFE---NKDGFDLAT-----------------------------WNAMIFGYILSNN 472
           A  +F+   NK     AT                             WN MI G++  ++
Sbjct: 129 ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSD 188

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
             +AL LF+ M  SG + D++T+A+ + AC  L  L+ GK +H Y  K   E+D+ + + 
Sbjct: 189 YEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTA 248

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           ++DMY KCG++  A  +F ++P  D + WT +I G    G+   AL ++H+M++S V PD
Sbjct: 249 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPD 308

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYIL 650
             TF  ++ A S    + +G   + N +       P +     +VDM  + G I +A  L
Sbjct: 309 AITFVGVLAACSHAGLVNEGIA-YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDL 367

Query: 651 FKQMDMRNTVLWNAMLVGLAQ----HGN 674
            + M M        +LVGL      HGN
Sbjct: 368 IQNMPMAPDYF---VLVGLLSACRIHGN 392



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 182/474 (38%), Gaps = 111/474 (23%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRL 160
           GSL YAR +F+++P+    + NSI+  Y +      +N+     LF  L         R 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTN------KNLPRQAILFYQLMMLQGLDPDRF 79

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   L K C   G +   + +H ++ K+G   D ++   L+N+YS  G +  A+ +FD M
Sbjct: 80  TFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM 136

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
             + VV W  M+ AYA+     E   LF                          +R E  
Sbjct: 137 VNKSVVSWATMIGAYAQWDLPHEAIKLF--------------------------RRMEIA 170

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                         SN+  WN  ++G+++  D   A+  F  M  S V+ D VT    L 
Sbjct: 171 --------------SNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLI 216

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A      L LG+ +H    K      V +G +L++MY+K G          ++ S +R  
Sbjct: 217 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG----------SIESAMRVF 266

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
             +PE                                                  D+ TW
Sbjct: 267 QEMPEK-------------------------------------------------DVMTW 277

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAM 519
            A+I G  +     KALELF  M  S  + D IT    + AC    ++ +G    ++   
Sbjct: 278 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPN 337

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
           K G +  +     ++DM  + G + +A+ +  ++P APD      ++S C  +G
Sbjct: 338 KYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 391



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 128/309 (41%), Gaps = 43/309 (13%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPS-----FSLSLLPFLQKSHFSSSSSSSQW 56
           Y +L  N  P +  T+   S     T +NLP      + L +L  L    F+  S     
Sbjct: 30  YARLVFNQIP-NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK-- 86

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
                   S   L  GK  H          D ++ N LM MYS CG LV AR++FDKM +
Sbjct: 87  --------SCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN 138

Query: 117 RDLISWNSILAAYAH---------------------------SGEGNAENVTEGFRLFRS 149
           + ++SW +++ AYA                            +G     +  E   LF  
Sbjct: 139 KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNE 198

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++ S     ++T+A LL  C   G +   + +H Y  K  +  D  +  ALV++Y+K G 
Sbjct: 199 MQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGS 258

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           I  A  +F  M E+DV+ W  ++   A  G G +   LF ++  S + PD  +   VL  
Sbjct: 259 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318

Query: 270 ISDLGKRHE 278
            S  G  +E
Sbjct: 319 CSHAGLVNE 327


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 179/508 (35%), Positives = 279/508 (54%), Gaps = 46/508 (9%)

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D  +WN++I G +       AL  F  M +   ++DE T+ + + +   + +++    +H
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
              +K+GFE    V++ ++DMY K G +  A  +F+ +   D V+WT++++G   NG  +
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            A+ ++ +MR+SGV PD+   A ++ A + LT ++ G+QIHA L+K    S   V  SLV
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            MYAKCG+I DA   F  M  R+ + W A++VG AQ+G G+ +L+ ++ M A G +PD +
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
           TFIG+L ACS+ GL+      F  M + YGI+P  EHY+ ++D LGR+G+  EA  L+  
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
           M     A + +ALL ACRV  + E G+  A+ L  LEP +S  YV+LSN+++AA +W+D 
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDA 364

Query: 816 TSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYV 852
              R  M+ + + K+P                        + I++K++ +I  IKE GYV
Sbjct: 365 ARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYV 424

Query: 853 PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------LSNK 897
           PD  F L D ++E KE  L YHSEKLA A+GL++ P  + I               +   
Sbjct: 425 PDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYT 484

Query: 898 EPLYA--------NRFHHLRDGMCPCAD 917
             +YA        N FHH  +G C C D
Sbjct: 485 SKVYARHIILRDSNCFHHFTEGRCSCGD 512



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 176/345 (51%), Gaps = 14/345 (4%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           ++ D++TL SVL + +S+ + +  +  +H   IK    A   V+ ALID+Y + G +  A
Sbjct: 37  MKIDEYTLPSVLNSFASM-KVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCA 95

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F      D+ +W +++ GY  + +  +A++LF  M  SG   D+I +A+ + AC  L
Sbjct: 96  IMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAEL 155

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
            ++  G+Q+HA  +KSG E  L V + ++ MY KCG++VDA   F+++P  D ++WT +I
Sbjct: 156 TVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALI 215

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL-DC 624
            G   NG    +L  Y QM  +G  PD  TF  L+ A S    L  GR     + K+   
Sbjct: 216 VGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGI 275

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLK 680
              P     ++D+  + G + +A  L  QM +  + V+W A+L     H     GE   K
Sbjct: 276 KPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAK 335

Query: 681 -LFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            LFE      +EP +S+ ++ + +  S  G   +A     LMR +
Sbjct: 336 NLFE------LEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSR 374



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 5/186 (2%)

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           S H  I+ +     + + N L+ MY++ G L  A  +F KM D+D++SW S++  Y+H+G
Sbjct: 62  SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
                +  E  +LF  +R S  +  ++ +A +L  C     +   + +H   +K GL   
Sbjct: 122 -----SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESS 176

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             V  +LV +Y+K G I +A   FD M  RDV+ W  ++  YA+NG G+     +  +  
Sbjct: 177 LSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236

Query: 254 SGLCPD 259
           +G  PD
Sbjct: 237 TGTKPD 242



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 164/410 (40%), Gaps = 92/410 (22%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  + G ++ G    A+  F  M   +++ D  T    L + A    +     +H  
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 358 TLKSGFYSAVIVGNSLINMYSKMG---C-------------------------------- 382
            +K+GF +  +V N+LI+MY+K G   C                                
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126

Query: 383 --------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                   + G+  DQ  +ASVL A + L   +   +QIH   +K+   +   V  +L+ 
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTV-MDFGQQIHATLVKSGLESSLSVDNSLVT 185

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+ +A   F+N    D+ +W A+I GY  +     +L+ +  M  +G + D IT
Sbjct: 186 MYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYIT 245

Query: 495 IATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
               + AC    +L  G+         Y +K G E   C    ++D+  + G + +A+ +
Sbjct: 246 FIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYAC----MIDLLGRSGKLAEAKGL 301

Query: 550 FND-IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
            N  + APD V W  +++ C  + E                                   
Sbjct: 302 LNQMVVAPDAVVWKALLAACRVHKE----------------------------------- 326

Query: 609 LEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           LE G     NL +L+  +S P+V +S  +MY+  G  EDA  + + M  R
Sbjct: 327 LELGEMAAKNLFELEPMNSMPYVMLS--NMYSAAGKWEDAARIRRLMRSR 374



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 18/194 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      + +  G+  HA ++ S       + N+L+TMY++CGS+V A R FD MP R
Sbjct: 147 SVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTR 206

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSS 172
           D+ISW +++  YA +G G         + +  +  + T    +T   LL  C     L S
Sbjct: 207 DVISWTALIVGYAQNGRGK-----HSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGS 261

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVM 231
           G  +       Y +K G    E  +  ++++  + GK+ EAK L + M    D V+WK +
Sbjct: 262 GRAYFEAMDKVYGIKPG---PEHYA-CMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKAL 317

Query: 232 L---RAYAENGFGE 242
           L   R + E   GE
Sbjct: 318 LAACRVHKELELGE 331



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 34/264 (12%)

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWNS++       EG  E+    F+  RS    I      TL  +L    S   +  
Sbjct: 5   DEVSWNSLILGCVR--EGFEEDALSFFQKMRSRDMKI---DEYTLPSVLNSFASMKVMQN 59

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + +VH   +K G    + V+ AL+++Y+K GK+  A  +F  M ++DVV W  ++  Y+ 
Sbjct: 60  AISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSH 119

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLG-----VISDLGKRHEEQVQAYAIKLLLYN 292
           NG  EE   LF  +  SG+ PD  +V  VL       + D G++    +    ++  L  
Sbjct: 120 NGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +NS                        +V+ W   + GY Q G    +++ +  MI +  
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQ 352
           + D +TF+  L A +    L  G+
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGR 263


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 194/573 (33%), Positives = 306/573 (53%), Gaps = 54/573 (9%)

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG---SMAEAEYLFEN 451
           S+L   +SL E     KQ+   AIK    +D  V T  I+    N    SM  A +LF+ 
Sbjct: 25  SLLPKCTSLRE----LKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQ 80

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D+  +N M  GY  ++   +A  LF+ +  SG   D+ T  + +KAC     L++G
Sbjct: 81  IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q+H  A+K G   ++ V   +++MY  C  M  A+ +F+ I  P  V +  MI+G    
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              + ALS++ +++   + P + T   ++ + + L AL+ G+ +H  + K   +    V 
Sbjct: 201 SRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVD 260

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +L+DMYAKCG+++DA  +F+ M +R+T  W+AM++  A HG+G + + LF++M+  G E
Sbjct: 261 TALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTE 320

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           PD +TF+G+L ACS+TGLV E +E F+ MR+KYG+ P ++HY  +VD LGRAGR +EA E
Sbjct: 321 PDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYE 380

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
            I+ +P   +  + R LL AC   G+ E GK V E++  L+      Y++LSN+ A A +
Sbjct: 381 FIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGR 440

Query: 812 WDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKE 848
           W+DV   R  M  + V K P                       +  +   ++ L+K +K 
Sbjct: 441 WEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKL 500

Query: 849 GGYVPDTDFVL-LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
            GYVP+T  V   D+E+EEKE  L YHSEKLA  +GL++TPP + I              
Sbjct: 501 VGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHS 560

Query: 894 -------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                  + +++ +     RFHH +DG C C D
Sbjct: 561 AAKLISLIFDRQIILRDVQRFHHFKDGKCSCED 593



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 19/317 (5%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D +T  S+L+A +S  + L   +Q+H  AIK     + +V   LI++Y     M  
Sbjct: 116 GLFPDDYTFPSLLKACASC-KALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDC 174

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+      + T+NAMI GY   +  ++AL LF  +     +  ++T+ + + +C  
Sbjct: 175 ARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCAL 234

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L  GK MH Y  K+GF   + V + ++DMY KCG++ DA  +F ++   D  AW+ M
Sbjct: 235 LGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAM 294

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I     +G    A+S++ +MR +G  PDE TF  L+ A S    +E+G +    +     
Sbjct: 295 IMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGM----- 349

Query: 625 SSDPFVGIS-------LVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN-- 674
             D +  I        +VD+  + G +E+AY     + +R T +LW  +L     HGN  
Sbjct: 350 -RDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVE 408

Query: 675 -GEETL-KLFEDMKAHG 689
            G+  + ++FE   +HG
Sbjct: 409 LGKRVIEQIFELDDSHG 425



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 143/337 (42%), Gaps = 48/337 (14%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             ++VL+N    GY +      A   F  ++ S +  D  TF   L A A    L  G+Q
Sbjct: 83  QPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQ 142

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYS---KMGCV----------C---------------- 384
           +H   +K G    V V  +LINMY+   +M C           C                
Sbjct: 143 LHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSR 202

Query: 385 --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                          L+    T+ SVL +S +L   L L K +H +  KN       V T
Sbjct: 203 PNEALSLFRELQARNLKPTDVTMLSVL-SSCALLGALDLGKWMHEYVKKNGFNRFVKVDT 261

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ALID+Y + GS+ +A  +FEN    D   W+AMI  Y +  +  KA+ LF  M  +G   
Sbjct: 262 ALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEP 321

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQS 548
           DEIT    + AC    ++++G + + Y M+  + +   +     ++D+  + G + +A  
Sbjct: 322 DEITFLGLLYACSHTGLVEEGFE-YFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYE 380

Query: 549 IFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQM 584
               +P  P  + W T++S C  +G  +L   +  Q+
Sbjct: 381 FIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQI 417



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   S   L  G+  H   +      + ++   L+ MY+ C  +  ARR+FDK+ + 
Sbjct: 126 SLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEP 185

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++++N+++  YA     N     E   LFR L+      + +T+  +L  C   G +  
Sbjct: 186 CVVTYNAMITGYARGSRPN-----EALSLFRELQARNLKPTDVTMLSVLSSCALLGALDL 240

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H Y  K G      V  AL+++Y+K G + +A  +F+ M  RD   W  M+ AYA 
Sbjct: 241 GKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAI 300

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G G +   LF ++ ++G  PD+ +   +L   S  G
Sbjct: 301 HGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTG 337



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 152/366 (41%), Gaps = 39/366 (10%)

Query: 48  SSSSSSSQWFSILRHAISTSDL--LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           +S+S+++   S+L    S  +L  L   +    + +   +  +F+  N  ++     S+ 
Sbjct: 15  NSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFI--NFCSLNPTTTSMQ 72

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
           +A  LFD++P  D++ +N++   YA +     +     F LF  +  S  F    T   L
Sbjct: 73  HAHHLFDQIPQPDIVLFNTMARGYART-----DTPLRAFTLFTQILFSGLFPDDYTFPSL 127

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           LK C S   +     +H  A+K+GL  + +V   L+N+Y+   ++  A+ +FD + E  V
Sbjct: 128 LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCV 187

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQ 280
           V +  M+  YA      E   LF +L    L P D ++  VL   +     DLGK   E 
Sbjct: 188 VTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEY 247

Query: 281 VQAYAIK----------------------LLLYNNNS--NVVLWNKKLSGYLQVGDNHGA 316
           V+                           + ++ N +  +   W+  +  Y   G    A
Sbjct: 248 VKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKA 307

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG-QQIHGTTLKSGFYSAVIVGNSLIN 375
           +  F  M ++  + D +TFL  L A + T  +  G +  +G   K G    +     +++
Sbjct: 308 VSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVD 367

Query: 376 MYSKMG 381
           +  + G
Sbjct: 368 LLGRAG 373


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 240/795 (30%), Positives = 380/795 (47%), Gaps = 121/795 (15%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           D  V+ +L+ +YSK G +R A+ +FDGM+  RD+V W  M      NG  +E   L  ++
Sbjct: 78  DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137

Query: 252 HRSGLCPDDESV-----QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
             SGL P+  ++      C  G   +L +     V  +AIK   +   ++V +    +  
Sbjct: 138 LESGLRPNAFTLCAAAHACFPG---ELFRSSGGTVLGFAIKTGFWG--TDVSVGCALIDM 192

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           + + GD   A + F  ++   V                                      
Sbjct: 193 FARNGDLVAARKVFNGLVERTV-------------------------------------- 214

Query: 367 VIVGNSLINMYSKMGCVC------------GLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
            +V   +I  Y + GC              G   D +T++S++ A +       L +Q+H
Sbjct: 215 -VVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSA-GLGQQLH 272

Query: 415 VHAIKNDTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYI-LS 470
              ++   V+D+ VS  L+D+Y +     SM  A  +F+     ++ +W A+I GY+   
Sbjct: 273 SLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCG 332

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
              + A+EL   M       + +T ++ +KAC  L     G+Q+HA  MK+       V 
Sbjct: 333 GQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVG 392

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA-LSIYHQMRLSGV 589
           + ++ MY + G M +A+  F      D +    ++S   D GE   +  S   Q+    V
Sbjct: 393 NALVSMYAESGCMEEARKAF------DQLYERNLLSTSSDIGETGRSNASWSSQIESMDV 446

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
               FTFA L+ A++ +    +G+Q+HA  IK    SD  +  SLV MY++CG ++DA  
Sbjct: 447 GVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACR 506

Query: 650 LFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            F +M D  N + W +++  LA+HG+ E  L LF DM   GV+P+ VT+I VLSACS+ G
Sbjct: 507 AFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVG 566

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV E  E F  M++ + + P +EHY+ +VD L R+G  +EA E I  MP +A A + + L
Sbjct: 567 LVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTL 626

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           LGACR   + E G+  A  ++ LEP D + YVLLSN++A    WD+V   R  M+ +N+ 
Sbjct: 627 LGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLS 686

Query: 829 KDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+                        A  I+AK+  LI+ IK+ GYVPDT  VL D+ ++
Sbjct: 687 KETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDK 746

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVIL---------------------SNKEPLY--A 902
            KE+ L  HSEK+A A+GLI+T P+  I                      + +E +   +
Sbjct: 747 LKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDS 806

Query: 903 NRFHHLRDGMCPCAD 917
           NRFH ++DG C C +
Sbjct: 807 NRFHRMKDGKCSCGE 821



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 270/580 (46%), Gaps = 92/580 (15%)

Query: 71  LGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAA 128
           LG++ H R+L +  +  D  + N+L+TMYS+CG +  ARR+FD M   RDL+SW ++   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS-ETVHGYALK 187
              +G   AE   E   L   + ES    +  TL      C       +S  TV G+A+K
Sbjct: 121 LTRNG---AEQ--EALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIK 175

Query: 188 IGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            G  W  D  V  AL++++++ G +  A+ +F+G+ ER VV+W +M+  Y + G   +  
Sbjct: 176 TGF-WGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAV 234

Query: 246 HLFVDLHRSGLCPDDESVQCV----------------------LGVISDL---------- 273
            LF+ +   G  PD  ++  +                      LG++SD           
Sbjct: 235 ELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMY 294

Query: 274 GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV-GDNHGAIECFVNMIRSNVQYDS 332
            K   EQ    A K+       NV+ W   +SGY+Q  G  + A+E    M+  +++ + 
Sbjct: 295 TKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNH 354

Query: 333 VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQ 390
           +T+   L A A   + + G+QIH   +K+   +  +VGN+L++MY++ GC+   R   DQ
Sbjct: 355 LTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQ 414

Query: 391 ------------------------------------FTLASVLRASSS--LPEGLHLSKQ 412
                                               FT AS+L A+++  LP      +Q
Sbjct: 415 LYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTK---GQQ 471

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF-ENKDGFDLATWNAMIFGYILSN 471
           +H  +IK    +D  +S +L+ +Y R G + +A   F E +D  ++ +W ++I       
Sbjct: 472 LHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHG 531

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS- 530
           ++ +AL LF  M  SG + +++T    + AC  + ++K+GK+ +  +M+    L   +  
Sbjct: 532 HAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKE-YFRSMQKDHRLIPRMEH 590

Query: 531 -SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
            + ++D+  + G + +A    N++P   D + W T++  C
Sbjct: 591 YACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGAC 630



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 8/305 (2%)

Query: 409 LSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENKDGF-DLATWNAMIFG 466
           L + +H   +  + + AD+ V+ +L+ +Y + G +  A  +F+   G  DL +W AM F 
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCLLMLKQGKQMHAYAMKSGF-E 524
              +    +AL L   M  SG R +  T+  A  AC    L    G  +  +A+K+GF  
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            D+ V   ++DM+ + G +V A+ +FN +     V WT MI+  V  G    A+ ++  M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC--- 641
              G  PD +T + +V A +   +   G+Q+H+ +++L   SD  V   LVDMY K    
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGV 700
            ++E A  +FK+M   N + W A++ G  Q G  E   ++L  +M    +EP+ +T+  +
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSL 360

Query: 701 LSACS 705
           L AC+
Sbjct: 361 LKACA 365



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 13/219 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   + SD   G+  HAR++ +S      + N L++MY+  G +  AR+ FD++ +R
Sbjct: 359 SLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER 418

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLCLSSGYVW 176
           +L+S +S +     +G  NA         + S  ES+    S  T A LL    + G   
Sbjct: 419 NLLSTSSDI---GETGRSNAS--------WSSQIESMDVGVSTFTFASLLSAAATVGLPT 467

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAY 235
             + +H  ++K G   D+ +S +LV++YS+ G + +A   FD M+ + +V+ W  ++ A 
Sbjct: 468 KGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISAL 527

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           A++G  E    LF D+  SG+ P+D +   VL   S +G
Sbjct: 528 AKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVG 566



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 511 GKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGC 568
           G+ +H   + +   + D  V++ +L MY KCG +  A+ +F+ +    D V+WT M    
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA---LEQGRQIHANLIKLD-C 624
             NG E  AL +  +M  SG+ P+ FT  +   A +C         G  +    IK    
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFT--LCAAAHACFPGELFRSSGGTVLGFAIKTGFW 179

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            +D  VG +L+DM+A+ G++  A  +F  +  R  V+W  M+    Q G   + ++LF  
Sbjct: 180 GTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239

Query: 685 MKAHGVEPDSVTFIGVLSACSYTG 708
           M   G EPD  T   ++SAC+  G
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQG 263



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 11/213 (5%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S+  + S+L  A +      G+  HA  + +    D+ ++N+L++MYSRCG L  A R F
Sbjct: 449 STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAF 508

Query: 112 DKMP-DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           D+M  D ++ISW SI++A A    G+AE       LF  +  S    + +T   +L  C 
Sbjct: 509 DEMEDDHNVISWTSIISALAK--HGHAE---RALSLFHDMILSGVKPNDVTYIAVLSACS 563

Query: 171 SSGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLW 228
             G V    E          L+        +V++ ++ G ++EA +F+ +   + D ++W
Sbjct: 564 HVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVW 623

Query: 229 KVML---RAYAENGFGEEVFHLFVDLHRSGLCP 258
           K +L   R Y     GE      +DL      P
Sbjct: 624 KTLLGACRTYENIEIGEIAARHVIDLEPQDPAP 656


>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
 gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
          Length = 597

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 180/524 (34%), Positives = 295/524 (56%), Gaps = 24/524 (4%)

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
             T    ++++S LP+ L    Q+H  ++K  + ++  V T+L+++Y R G + +A+  F
Sbjct: 74  HLTFPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQKAF 133

Query: 450 -ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            E +      +W A+I  Y+ +    +A+ +      SG R D  T    + AC  +  L
Sbjct: 134 DEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADL 193

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G+++   A K G   ++ V++  +D+YVKCG M  A+ +F+ +   D VAW  M+ G 
Sbjct: 194 VTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGY 253

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG    AL ++  M++ G+ PD +T A  + A + L AL+ GR++   L   +   +P
Sbjct: 254 ASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNP 313

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            +G +L+DMYAKCG+  +A+++F++M  R+ ++WNAM++GL   G+ +    L   MK  
Sbjct: 314 VLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKS 373

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G+  +  TFIG+L +C++TGLV +    F  M + Y I P +EHY  +VD L RAG  +E
Sbjct: 374 GMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQE 433

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A +LI  MP EA+A +  ALLG C++  + +  + V ++L+ LEP++S  YV+LSNI++ 
Sbjct: 434 AHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSNIYSN 493

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
           + +W+D    R EMK K V+K PA                       D I+AK++ L   
Sbjct: 494 SGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQIYAKLDELGME 553

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
           +K  GY P T+ V+ D+E EEKE  L +HSEK+A A+ L++T P
Sbjct: 554 MKAMGYKPSTEVVMFDIENEEKEHTLVHHSEKIAIAFSLLTTEP 597



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 145/355 (40%), Gaps = 35/355 (9%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R L S  L L      SH  + S  +  F+I   +     L  G   HAR L      + 
Sbjct: 51  RALSSSGLHLHVLRFHSHLPNPSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNP 110

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKM-PDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            +  +L+ +Y+RCG L  A++ FD+M      +SW +++ AY  +G G      E   + 
Sbjct: 111 HVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRG-----LEAIGVA 165

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           RS   S       T   +L  C     +   E V   A K G+  + FV+ A V++Y K 
Sbjct: 166 RSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKC 225

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G++ +A+ +FD M+ +DVV W  M+  YA NG   E   LF  +   G+ PD  +V   L
Sbjct: 226 GEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGAL 285

Query: 268 GVIS-----DLGKRHEEQVQ------------------------AYAIKLLLYNNNSNVV 298
              +     DLG+R    +Q                          A  +     N +++
Sbjct: 286 SACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDII 345

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +WN  + G    G    A      M +S +  +  TF+  L +   T  +  G++
Sbjct: 346 VWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRR 400


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 210/665 (31%), Positives = 337/665 (50%), Gaps = 93/665 (13%)

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
           T +L    QIH   + + + S   + N+LIN+Y+K GC+                     
Sbjct: 155 TRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWT 214

Query: 384 ------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                    G   +QFT +S+L AS++    LH  +Q+H    K
Sbjct: 215 SLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLH-GQQLHSLIHK 273

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           +   A+ FV TAL+D+Y +   M  A  +F+     +L +WN+MI G+  +N   +A+ +
Sbjct: 274 HGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGV 333

Query: 480 FSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           F  +      + +E+++++ + AC  +  L  G+Q+H   +K G      V + ++DMY 
Sbjct: 334 FKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYF 393

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KC    +   +F  +   D V W  ++ G V N + + A + +  MR  G++PDE +F+ 
Sbjct: 394 KCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFST 453

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ +S+ L AL QG  IH  +IKL    +  +  SL+ MYAKCG++ DAY +F+ ++  N
Sbjct: 454 VLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHN 513

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            + W AM+     HG   + ++LFE M + G+EP  VTF+ VLSACS+TG V E   +F+
Sbjct: 514 VISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFN 573

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M++ + + P  EHY+ +VD LGRAG   EA   I SMP + + S+  ALLGACR  G+ 
Sbjct: 574 SMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNL 633

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------- 831
           + G+  AE+L  +EP++   YVLL+N+   + + ++    R  M    V+K+P       
Sbjct: 634 KMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDV 693

Query: 832 ----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                           +D I+  +E L K +K+ GYV +T+FV   +EE E+E+ L+YHS
Sbjct: 694 KNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHS 753

Query: 876 EKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGM 912
           EKLA A+GL++ P  S I                     + ++E +    NRFH   DG 
Sbjct: 754 EKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGF 813

Query: 913 CPCAD 917
           C C D
Sbjct: 814 CSCGD 818



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/554 (22%), Positives = 217/554 (39%), Gaps = 110/554 (19%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-- 116
           +L  AI T  L      H +I+ ++     FL NNL+ +Y++CG L  A  LF       
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           + +++W S++   +H          +   LF  +R S  + ++ T + +L    ++  V 
Sbjct: 208 KTIVTWTSLITHLSHFNMH-----LQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVL 262

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +H    K G   + FV  ALV++Y+K   +  A  +FD M ER++V W  M+  + 
Sbjct: 263 HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 322

Query: 237 ENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLL 290
            N   +    +F D+ R   + P++ SV  VL   +++     G++    V  Y +  L 
Sbjct: 323 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLT 382

Query: 291 YNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           Y  NS                        +VV WN  + G++Q      A   F  M R 
Sbjct: 383 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 442

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            +  D  +F   L + A    L+ G  IH   +K G+   + +  SLI MY+K G     
Sbjct: 443 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCG----- 497

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
                                                       +L+D Y          
Sbjct: 498 --------------------------------------------SLVDAY---------- 503

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +FE  +  ++ +W AMI  Y L   +++ +ELF HM + G     +T    + AC    
Sbjct: 504 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 563

Query: 507 MLKQG-------KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDD 558
            +++G       K++H   M  G E   C    ++D+  + G + +A+     +P  P  
Sbjct: 564 RVEEGLAHFNSMKKIH--DMNPGPEHYAC----MVDLLGRAGWLDEAKRFIESMPMKPTP 617

Query: 559 VAWTTMISGCVDNG 572
             W  ++  C   G
Sbjct: 618 SVWGALLGACRKYG 631



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 35/324 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL  + +T  +L G+  H+ I       + F+   L+ MY++C  +  A R+FD+MP+R
Sbjct: 250 SILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPER 309

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSGYVW 176
           +L+SWNS++  + H+   N  +   G  +F+  LRE     + ++++ +L  C + G + 
Sbjct: 310 NLVSWNSMIVGFFHN---NLYDRAVG--VFKDVLREKTVIPNEVSVSSVLSACANMGGLN 364

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               VHG  +K GLV   +V  +L+++Y K     E   LF  + +RDVV W V++  + 
Sbjct: 365 FGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV 424

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN-- 293
           +N   EE  + F  + R G+ PD+ S   VL   + L   H+   +    IKL    N  
Sbjct: 425 QNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMC 484

Query: 294 --------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                     + NV+ W   +S Y   G  +  IE F +M+   
Sbjct: 485 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 544

Query: 328 VQYDSVTFLVALAAVAGTDNLNLG 351
           ++   VTF+  L+A + T  +  G
Sbjct: 545 IEPSHVTFVCVLSACSHTGRVEEG 568


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 192/587 (32%), Positives = 312/587 (53%), Gaps = 54/587 (9%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           + + VLWN  ++GY+Q G++  AI+ F +M+ S  + DSVTF   L+       +  G+Q
Sbjct: 73  DKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQ 132

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSK---MG----------------------------- 381
           +HG  ++SG     +VGN+L+ +YSK   +G                             
Sbjct: 133 LHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGF 192

Query: 382 -----------CVCGLRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                         G++ D  T  S L +   SSSL +     K+IH + +++  + D +
Sbjct: 193 MDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQ----IKEIHGYIVRHGVILDVY 248

Query: 428 VSTALIDVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
           +++ALID+Y  CR+  MA   +    K  FD+  + AMI GY+L+  +  ALE+F  +  
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFNLSTK--FDIVIYTAMISGYVLNGMNKDALEIFRWLLQ 306

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
                + +T ++ + AC  L  +K G+++H Y +K+  E    V S I++MY KCG +  
Sbjct: 307 KKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDL 366

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A  IF  I   D + W ++I+    +G+ + A+ ++ QM + GV  D  T +  + A + 
Sbjct: 367 AHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACAN 426

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           + AL  G++IH  +IK    SD F   +L++MYAKCG +  A ++F  M  +N V WN++
Sbjct: 427 IPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSI 486

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           +     HG   ++L LF +M   G++PD +TF+ +LS+C + G V +    F  M E+YG
Sbjct: 487 IAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYG 546

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I  ++EHY+ + D  GRAG   EA E+I SMPF  +AS+   LLGACRV G+ E  +  +
Sbjct: 547 IPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVAS 606

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             L+ LEP +S  Y+LL+++ A A +W  V   +  MK + V+K P 
Sbjct: 607 RYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPG 653



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/603 (24%), Positives = 269/603 (44%), Gaps = 89/603 (14%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
            F  + T  P++K C     V   + +    L++G   D FV+ +L+ +Y+  G I +A+
Sbjct: 6   VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV-ISDL 273
             FD M ++D VLW VM+  Y + G  +    LF D+  S   PD  +  CVL +  S+ 
Sbjct: 66  RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125

Query: 274 GKRHEEQVQAYAI----------------------------KLLLYNNNSNVVLWNKKLS 305
              +  Q+    +                            KL       ++V+WN+ + 
Sbjct: 126 MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIG 185

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY+Q G    A   F  MI + ++ DS+TF   L ++A + +L   ++IHG  ++ G   
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245

Query: 366 AVIVGNSLINMYSK-----MGC----------------------VCGLRTD--------- 389
            V + ++LI++Y K     M C                      + G+  D         
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305

Query: 390 -------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                    T +S+L A + L   + L +++H + IKN+      V +A++++Y + G +
Sbjct: 306 QKKMIPNALTFSSILPACAGL-AAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRL 364

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A  +F      D   WN++I  +       +A+ LF  M   G + D +T++ A+ AC
Sbjct: 365 DLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSAC 424

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             +  L  GK++H + +K  FE DL   S +++MY KCG +  A+ +FN +   ++VAW 
Sbjct: 425 ANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWN 484

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           ++I+    +G    +L+++H M   G+ PD  TF  ++  SSC        Q+   +   
Sbjct: 485 SIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTIL--SSC----GHAGQVEDGVRYF 538

Query: 623 DCSSDPFVGIS--------LVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHG 673
            C ++ + GI         + D++ + G++++A+ +   M       +W  +L     HG
Sbjct: 539 RCMTEEY-GIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHG 597

Query: 674 NGE 676
           N E
Sbjct: 598 NVE 600



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 272/597 (45%), Gaps = 88/597 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++     +++ LGK     IL      D F+ ++L+ +Y+  G +  ARR FDKM D+D
Sbjct: 16  VIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKD 75

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + WN ++  Y   GE ++       +LF+ +  S      +T A +L +  S   V   
Sbjct: 76  CVLWNVMINGYVQCGESDS-----AIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYG 130

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +HG  ++ GL +   V   LV +YSK  ++ +A+ LFD M + D+V+W  M+  Y +N
Sbjct: 131 RQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQN 190

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK----LLLYNN 293
           GF ++   LF ++  +G+ PD  +    L  +++    +  +++  Y ++    L +Y N
Sbjct: 191 GFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLN 250

Query: 294 NS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
           ++                        ++V++   +SGY+  G N  A+E F  +++  + 
Sbjct: 251 SALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMI 310

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------- 381
            +++TF   L A AG   + LG+++HG  +K+       VG++++NMY+K G        
Sbjct: 311 PNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLI 370

Query: 382 --------CVC---------------------------GLRTDQFTLASVLRASSSLPEG 406
                    +C                           G++ D  T+++ L A +++P  
Sbjct: 371 FGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIP-A 429

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           LH  K+IH   IK    +D F  +ALI++Y + G +  A  +F      +   WN++I  
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAA 489

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMKS 521
           Y        +L LF +M   G + D IT  T + +CG    ++ G +        Y + +
Sbjct: 490 YGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPA 549

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLA 577
             E   C++    D++ + G + +A  +   +P P   + W T++  C  +G  +LA
Sbjct: 550 QMEHYACMA----DLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELA 602



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 189/368 (51%), Gaps = 14/368 (3%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           CG+  D++T   V++  + L   + L K I    ++     D FV+++LI +Y  NG + 
Sbjct: 4   CGVFPDKYTFPPVIKCCTGL-NNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIE 62

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A   F+     D   WN MI GY+    S  A++LF  M +S  + D +T A  +    
Sbjct: 63  DARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISC 122

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
              M++ G+Q+H   ++SG +    V + ++ +Y K   + DA+ +F+ +P  D V W  
Sbjct: 123 SEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNR 182

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI G V NG  D A  ++++M  +G+ PD  TF   + + +  ++L+Q ++IH  +++  
Sbjct: 183 MIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHG 242

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              D ++  +L+D+Y KC +   A  +F      + V++ AM+ G   +G  ++ L++F 
Sbjct: 243 VILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFR 302

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG--IEPEVEHY----SFLV 737
            +    + P+++TF  +L AC+  GL +       L RE +G  I+ E+E      S ++
Sbjct: 303 WLLQKKMIPNALTFSSILPACA--GLAA-----IKLGRELHGYIIKNELEEKCPVGSAIM 355

Query: 738 DALGRAGR 745
           +   + GR
Sbjct: 356 NMYAKCGR 363



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 13/242 (5%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
            LQK    ++ + S   SIL      + + LG+  H  I+ +       + + +M MY++
Sbjct: 304 LLQKKMIPNALTFS---SILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAK 360

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG L  A  +F ++  +D I WNSI+ +++  G+       E   LFR +         +
Sbjct: 361 CGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPE-----EAIYLFRQMGMEGVKYDCV 415

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T++  L  C +   +   + +HG+ +K     D F   AL+N+Y+K GK+  A+ +F+ M
Sbjct: 416 TVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLM 475

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           QE++ V W  ++ AY  +G+  +   LF ++   G+ PD  +    L ++S  G  H  Q
Sbjct: 476 QEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHIT---FLTILSSCG--HAGQ 530

Query: 281 VQ 282
           V+
Sbjct: 531 VE 532


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 184/507 (36%), Positives = 285/507 (56%), Gaps = 23/507 (4%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K  H   I+ D   D  +   LI+ Y + G +  A  +F+      L +WN MI  Y  
Sbjct: 72  AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 131

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +AL++F  M   G +  E TI++ + ACG      + K++H  ++K+  +L+L V
Sbjct: 132 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 191

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +LD+Y KCG + DA  +F  +     V W++M++G V N   + AL +Y + +   +
Sbjct: 192 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 251

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
             ++FT + ++ A S L AL +G+Q+HA + K    S+ FV  S VDMYAKCG++ ++YI
Sbjct: 252 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 311

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F ++  +N  LWN ++ G A+H   +E + LFE M+  G+ P+ VTF  +LS C +TGL
Sbjct: 312 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 371

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
           V E    F LMR  YG+ P V HYS +VD LGRAG   EA ELI S+PF+ +AS+  +LL
Sbjct: 372 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 431

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            +CRV  + E  +  AEKL  LEP ++  +VLLSNI+AA  QW+++  +R  ++  +VKK
Sbjct: 432 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 491

Query: 830 -------DPADL----------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
                  D  D                 I + ++ L+ + ++ GY P  +  L DVE  +
Sbjct: 492 VRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGK 551

Query: 867 KERALYYHSEKLARAYGLISTPPSSVI 893
           KE  L  HSEKLA  +GL+  P SS +
Sbjct: 552 KEELLMQHSEKLALVFGLMCLPESSPV 578



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 1/240 (0%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           + K  H   ++   E D+ + + +++ Y KCG +  A+ +F+ +     V+W TMI    
Sbjct: 71  EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 130

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N  E  AL I+ +MR  G    EFT + ++ A        + +++H   +K     + +
Sbjct: 131 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 190

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           VG +L+D+YAKCG I+DA  +F+ M  +++V W++M+ G  Q+ N EE L L+   +   
Sbjct: 191 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 250

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           +E +  T   V+ ACS    + E  +  H +  K G    V   S  VD   + G  +E+
Sbjct: 251 LEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 309



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 117/549 (21%), Positives = 222/549 (40%), Gaps = 108/549 (19%)

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           S+LA+Y      + E V+ G       R S  F++R  +  +L+LC  +G V  ++  HG
Sbjct: 31  SVLASY------DQEEVSPG-------RYSNEFSNRNLVHEILQLCARNGAVMEAKACHG 77

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             ++I L  D  +   L+N YSK G +  A+ +FDGM ER +V W  M+  Y  N    E
Sbjct: 78  KIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESE 137

Query: 244 VFHLFVDLHRSGLCPDDESVQCVL---GVISD---LGKRHEEQVQAY------------- 284
              +F+++   G    + ++  VL   GV  D     K H   V+               
Sbjct: 138 ALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLD 197

Query: 285 ----------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                     A+++     + + V W+  ++GY+Q  +   A+  +    R +++ +  T
Sbjct: 198 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 257

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
               + A +    L  G+Q+H    KSGF S V V +S ++MY+K    CG   + + + 
Sbjct: 258 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK----CGSLRESYIIF 313

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S ++                    KN  + ++ +S      + ++    E   LFE    
Sbjct: 314 SEVQE-------------------KNLELWNTIISG-----FAKHARPKEVMILFEK--- 346

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                                       M   G   +E+T ++ +  CG   ++++G++ 
Sbjct: 347 ----------------------------MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 378

Query: 515 HAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
                 + G   ++   S ++D+  + G + +A  +   IP  P    W ++++ C    
Sbjct: 379 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC--RV 436

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI-HANLIKLDCSSDPFVG 631
            ++L L+     +L  + P+     +L+  S+   A +Q  +I  +  +  DC      G
Sbjct: 437 YKNLELAEVAAEKLFELEPENAGNHVLL--SNIYAANKQWEEIAKSRKLLRDCDVKKVRG 494

Query: 632 ISLVDMYAK 640
            S +D+  K
Sbjct: 495 KSWIDIKDK 503



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 34/324 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           IL+       ++  K+ H +I+      D  L N L+  YS+CG +  AR++FD M +R 
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SWN+++  Y  +        +E   +F  +R      S  T++ +L  C  +      
Sbjct: 119 LVSWNTMIGLYTRN-----RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 173

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H  ++K  +  + +V  AL+++Y+K G I++A  +F+ MQ++  V W  M+  Y +N
Sbjct: 174 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 233

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN---- 293
              EE   L+    R  L  +  ++  V+   S+L    E +Q+ A   K    +N    
Sbjct: 234 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 293

Query: 294 ------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     N+ LWN  +SG+ +       +  F  M +  + 
Sbjct: 294 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 353

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQ 353
            + VTF   L+    T  +  G++
Sbjct: 354 PNEVTFSSLLSVCGHTGLVEEGRR 377



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 120/241 (49%), Gaps = 6/241 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L       D L  K  H   + +    + ++   L+ +Y++CG +  A ++F+ M D+
Sbjct: 159 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 218

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
             ++W+S++A Y  +     +N  E   L+R  +      ++ TL+ ++  C +   +  
Sbjct: 219 SSVTWSSMVAGYVQN-----KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 273

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H    K G   + FV+ + V++Y+K G +RE+  +F  +QE+++ LW  ++  +A+
Sbjct: 274 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 333

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +   +EV  LF  + + G+ P++ +   +L V    G   EE  + + +    Y  + NV
Sbjct: 334 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV-EEGRRFFKLMRTTYGLSPNV 392

Query: 298 V 298
           V
Sbjct: 393 V 393



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A+ + +  H  +I++D   D  +   L++ Y+KCG +E A  +F  M  R+ V WN M +
Sbjct: 68  AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM-I 126

Query: 668 GLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE--NFHLMREKY 724
           GL      E E L +F +M+  G +    T   VLSAC   G+  +A E    H +  K 
Sbjct: 127 GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKT 183

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            I+  +   + L+D   + G  K+A ++  SM  ++S +    + G
Sbjct: 184 CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 229



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 6/158 (3%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           V +SS      +N  ++  +LL + +    S   +     S++    + + L+ GK  HA
Sbjct: 221 VTWSSMVAGYVQN-KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 279

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
            I  S    + F+ ++ + MY++CGSL  +  +F ++ +++L  WN+I++ +A       
Sbjct: 280 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK- 338

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               E   LF  +++     + +T + LL +C  +G V
Sbjct: 339 ----EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 372


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 182/500 (36%), Positives = 278/500 (55%), Gaps = 48/500 (9%)

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           GY+    +   + ++S M       ++ T    ++AC     +++GKQ+HA+ +K GF  
Sbjct: 68  GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 127

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD--DVAWTTMISGCVDNGEEDLALSIYHQ 583
           D    + ++ MYV   ++  A+ +F+++P  D   V+W  MI+  V +     A +++ +
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           MRL  VV D+F  A ++ A + L ALEQG+ IH  + K     D  +  +++DMY KCG 
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           +E A  +F ++  +    WN M+ GLA HG GE  ++LF++M+   V PD +TF+ VLSA
Sbjct: 248 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           C+++GLV E    F  M E  G++P +EH+  +VD LGRAG  +EA +LI  MP    A 
Sbjct: 308 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAG 367

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +  AL+GACR+ G+TE G+ + +K++ LEP +S  YVLL+N++A+A +W+DV   R  M 
Sbjct: 368 VLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMN 427

Query: 824 RKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
            + VKK P                       A  I+AK++ +++ I+  GYVPDTD VL 
Sbjct: 428 DRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLH 487

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLY---- 901
           D++EEEKE  LYYHSEKLA A+GL+ T P   +  +K                 +Y    
Sbjct: 488 DIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREI 547

Query: 902 ----ANRFHHLRDGMCPCAD 917
                NRFHH R G C C D
Sbjct: 548 IIRDRNRFHHFRMGGCSCKD 567



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 179/369 (48%), Gaps = 17/369 (4%)

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
           QY S    + L+A    DN  +G+ I    +    Y    +  + I MYS+M     +  
Sbjct: 38  QYHSQIIRLGLSA----DNDAMGRVIKFCAISKSGYLRWQLARNCIFMYSRM-LHKSVSP 92

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           ++FT   ++RA   +   +   KQIH H +K    AD F    LI +Y    S+ +A  +
Sbjct: 93  NKFTYPPLIRACC-IDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRV 151

Query: 449 FENKDGFDL--ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
           F+N    D    +WNAMI  Y+ SN  H+A  LF  M      LD+   A+ + AC  L 
Sbjct: 152 FDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLG 211

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L+QGK +H Y  KSG ELD  +++ ++DMY KCG +  A  +FN++P     +W  MI 
Sbjct: 212 ALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIG 271

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLD 623
           G   +G+ + A+ ++ +M    V PD  TF  ++ A +    +E+G+   Q    ++ L 
Sbjct: 272 GLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLK 331

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ-HGN---GEETL 679
              + F    +VD+  + G +E+A  L  +M +         LVG  + HGN   GE+  
Sbjct: 332 PGMEHFG--CMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIG 389

Query: 680 KLFEDMKAH 688
           K   +++ H
Sbjct: 390 KKVIELEPH 398



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           + F + +K  Y         +  + +  H S S +   +  ++R       +  GK  HA
Sbjct: 59  IKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHA 118

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP--DRDLISWNSILAAYAHSGEG 135
            +L      D F  NNL+ MY    SL  ARR+FD MP  DR+ +SWN+++AAY  S   
Sbjct: 119 HVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQS--- 175

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
               + E F LF  +R       +   A +L  C   G +   + +HGY  K G+  D  
Sbjct: 176 --NRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSK 233

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           ++  ++++Y K G + +A  +F+ + ++ +  W  M+   A +G GE    LF ++ R  
Sbjct: 234 LATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREM 293

Query: 256 LCPDDESVQCVLGVISDLG 274
           + PD  +   VL   +  G
Sbjct: 294 VAPDGITFVNVLSACAHSG 312



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 32/241 (13%)

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           F   R L +S++  ++ T  PL++ C     +   + +H + LK G   D F    L+++
Sbjct: 80  FMYSRMLHKSVS-PNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 138

Query: 204 YSKFGKIREAKFLFDGMQERD--VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           Y  F  + +A+ +FD M +RD   V W  M+ AY ++    E F LF  +    +  D  
Sbjct: 139 YVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKF 198

Query: 262 SVQCVLGVISDLGKRHEEQ-----VQAYAIKL----------------------LLYNN- 293
               +L   + LG   + +     ++   I+L                       ++N  
Sbjct: 199 VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNEL 258

Query: 294 -NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
               +  WN  + G    G    AIE F  M R  V  D +TF+  L+A A +  +  G+
Sbjct: 259 PQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGK 318

Query: 353 Q 353
            
Sbjct: 319 H 319



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 41/92 (44%)

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
             + N V WN  ++ Y+Q    H A   F  M   NV  D       L+A  G   L  G
Sbjct: 157 QRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQG 216

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           + IHG   KSG      +  ++I+MY K GC+
Sbjct: 217 KWIHGYIEKSGIELDSKLATTVIDMYCKCGCL 248


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 226/762 (29%), Positives = 358/762 (46%), Gaps = 120/762 (15%)

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLW--NKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDS 332
           R  + V A AI   +    S + L+  N  L+ Y++ G +  A+  F  M  R+NV Y +
Sbjct: 61  RKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVT 120

Query: 333 VT--------------------------FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           +T                          F   L      D   +   +H   +K G+ S 
Sbjct: 121 LTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSN 180

Query: 367 VIVGNSLINMYSKMGCV-----------------------------C------------- 384
             VG +LIN YS  G V                             C             
Sbjct: 181 AFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGM 240

Query: 385 -GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G   + +T  + L+AS  L    H +K +H   +K     D  V   L+ +Y + G M+
Sbjct: 241 DGFMPNNYTFDTALKASIGLG-AFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMS 299

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           +A  +F      D+  W+ MI  +  +   +KA+++F  M       +E T+++ +  C 
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCA 359

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
                  G+Q+H   +K GF+LD+ VS+ ++D+Y KC  M  A  +F ++ + + V+W T
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNT 419

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           +I G  + GE   AL+++ +   + V   E TF+  + A + L ++E G Q+H   IK +
Sbjct: 420 VIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTN 479

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
            +    V  SL+DMYAKCG+I+ A  +F +M+  +   WNA++ G + HG G + L++F+
Sbjct: 480 NAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFD 539

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            MK    +P+ +TF+GVLS CS  GL+ +  + F  M   +GIEP +EHY+ +V   GR+
Sbjct: 540 IMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRS 599

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G+  +A  LI  +P+E S  + RA+L A   Q + E  +  AE+++ + P D + YVLLS
Sbjct: 600 GQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLS 659

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           N++A A QW +V S R  MK K VKK+P                         LI   +E
Sbjct: 660 NMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLE 719

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS---------- 890
            L  +    GYVPD + VLLD+++EEK++ L+ HSE+LA AYGL+  P S          
Sbjct: 720 WLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNL 779

Query: 891 --------------SVILSNKEPLYANRFHHLRDGMCPCADN 918
                         S++  +      NRFHH   G+C C D+
Sbjct: 780 RICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDH 821



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 162/653 (24%), Positives = 270/653 (41%), Gaps = 98/653 (15%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNS 82
           F+  T  +   +S S++P L          S  + ++LR  I  +D +  K+ H  IL  
Sbjct: 28  FSVQTAESSVQWSDSVVPCLD---------SHAYGTMLRRCIRKNDSVSAKAIHCDILKK 78

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
               D F TN L+  Y + G    A  LFD+MP+R+ +S+ ++   YA       + V  
Sbjct: 79  GSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQ-----DPVGL 133

Query: 143 GFRLFRSLRE--SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
             RL R   E     FTS       LKL +S         +H   +K+G   + FV  AL
Sbjct: 134 YSRLHREGHELNPHVFTS------FLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAAL 187

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           +N YS  G +  A+ +F+G+  +D+V+W  ++  Y ENG  E+   L   +   G  P++
Sbjct: 188 INAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNN 247

Query: 261 ESVQCVLGVISDLGKRH-EEQVQAYAIK-------------LLLYNN------------- 293
            +    L     LG  H  + V    +K             L LY               
Sbjct: 248 YTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNE 307

Query: 294 --NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
              ++VV W+  ++ + Q G  + A++ F+ M    V  +  T    L   A      LG
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLG 367

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKM----------------------GCVCG---- 385
           +Q+HG  +K GF   V V N+LI++Y+K                         + G    
Sbjct: 368 EQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENL 427

Query: 386 -----------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                            +   + T +S L A +SL   + L  Q+H  AIK +      V
Sbjct: 428 GEGGKALNMFREALRNQVSVTEVTFSSALGACASLAS-MELGVQVHGLAIKTNNAKRVAV 486

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S +LID+Y + G +  A+ +F   +  D+A+WNA+I GY       +AL +F  M  S  
Sbjct: 487 SNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDC 546

Query: 489 RLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           + + +T    +  C    ++ QG+    +     G E  L   + ++ ++ + G +  A 
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAM 606

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           ++   IP  P  + W  M+S  ++   E+ A     ++ L     DE T+ +L
Sbjct: 607 NLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEI-LKINPKDEATYVLL 658


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 225/712 (31%), Positives = 341/712 (47%), Gaps = 95/712 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           +N  +  Y  +G  H AI+ + +M+R  V  +  TF   L A +   +L  G+ IH    
Sbjct: 68  YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127

Query: 360 KSGFYSAVIVGNSLINMYSK---------------------------------------- 379
            +G ++ + V  +LI++Y +                                        
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187

Query: 380 ----MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK---NDTVADSFVSTAL 432
               M    GLR +  TL S+L   +     L     IH + ++           + TAL
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLLPLLAQ-HGALFQGTSIHAYCLRACLEQNEEQVLIGTAL 246

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           +D+Y +   +  A  +F      +  TW+A+I G++L +   +A  LF  M   G   L 
Sbjct: 247 LDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLS 306

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             ++A+A++ C  L  L  G Q+HA   KSG   DL  S+ +L MY K G + +A   F+
Sbjct: 307 ATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFD 366

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           +I   D +++  ++SGCV NG+ + A  ++ +M+   + PD  T   L+ A S L AL+ 
Sbjct: 367 EIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQH 426

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+  H ++I    + +  +  SL+DMYAKCG I+ +  +F +M  R+ V WN M+ G   
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G+E   LF  MK  G  PD VTFI +++ACS++GLV+E    F  M  KYGI P +E
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY  +VD L R G   EA + I SMP +A   +  ALLGACR+  + + GK V+  +  L
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKL 606

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            P  +  +VLLSNIF+AA ++D+    R   K K  KK P                    
Sbjct: 607 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQS 666

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              +  I+ +++ ++  IK+ GY  DT FVL D+EEEEKE+AL YHSEKLA A+G++S  
Sbjct: 667 HPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLN 726

Query: 889 PSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
               I   K                            NRFHH ++G C C +
Sbjct: 727 EDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGN 778



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 234/562 (41%), Gaps = 93/562 (16%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G L  AR++FD++P  D  ++N+++ AY+  G  +A        L+RS+       ++ T
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHA-----AIDLYRSMLRFRVAPNKYT 102

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
              +LK C +   + A  T+H +A   GL  D FVS AL+++Y +  +   A+ +F  M 
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 222 ERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------ 274
            RDVV W  ML  YA +G +   + HL       GL P+  ++  +L +++  G      
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 275 -----------KRHEEQV---------------QAYAIKLLLYNNNSNVVLWNKKLSGYL 308
                      +++EEQV                 YA ++       N V W+  + G++
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLV-ALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
                  A   F +M+   + + S T +  AL   A   +L++G Q+H    KSG ++ +
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 368 IVGNSLINMYSKM--------------------------GCV-----------------C 384
              NSL++MY+K                           GCV                 C
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            +  D  T+ S++ A S L   L   K  H   I      ++ +  +LID+Y + G +  
Sbjct: 403 NMEPDIATMVSLIPACSHLA-ALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           +  +F+     D+ +WN MI GY +     +A  LF  M   G   D++T    + AC  
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521

Query: 505 LLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
             ++ +GK       H Y +    E  +C    ++D+  + G + +A      +P   DV
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEHYIC----MVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 560 -AWTTMISGCVDNGEEDLALSI 580
             W  ++  C  +   DL   +
Sbjct: 578 RVWGALLGACRIHKNIDLGKQV 599



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 9/368 (2%)

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ++ +   G +A A  +F+     D   +NA+I  Y      H A++L+  M       ++
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T    +KAC  L+ L+ G+ +HA+A  +G   DL VS+ ++D+Y++C     A+++F  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQ 611
           +P  D VAW  M++G  ++G    A++    M+   G+ P+  T   L+   +   AL Q
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 612 GRQIHANLIKLDCSSDP---FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           G  IHA  ++     +     +G +L+DMYAKC  +  A  +F  M +RN V W+A++ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIG-VLSACSYTGLVSEAYENFHLMREKYGIE 727
                   E   LF+DM   G+   S T +   L  C+    +    +  H +  K GI 
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ-LHALIAKSGIH 339

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
            ++   + L+    +AG   EA      +  + + S + ALL  C   G  E    V +K
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKK 398

Query: 788 LMA--LEP 793
           + A  +EP
Sbjct: 399 MQACNMEP 406



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S++   S LR   S +DL +G   HA I  S    D   +N+L++MY++ G +  A   F
Sbjct: 306 SATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFF 365

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D++  +D IS+ ++L+    +G+       E F +F+ ++         T+  L+  C  
Sbjct: 366 DEIAVKDTISYGALLSGCVQNGKAE-----EAFLVFKKMQACNMEPDIATMVSLIPACSH 420

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +   +  HG  +  GL  +  +  +L+++Y+K GKI  ++ +FD M  RDVV W  M
Sbjct: 421 LAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTM 480

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF+ +   G  PDD +  C++   S  G
Sbjct: 481 IAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 204/595 (34%), Positives = 309/595 (51%), Gaps = 97/595 (16%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVST 430
           I +Y +M  V   R +++T  +VL+A S    + EG+    Q+H H +K+    D  + +
Sbjct: 122 ILLYYEM-MVAHFRPNKYTYPAVLKACSDAGVVAEGV----QVHAHLVKHGLGGDGHILS 176

Query: 431 ALIDVYCRNGSMAEAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           + I +Y   G + EA  + ++K G  D   WNAMI GY+       A ELF  M      
Sbjct: 177 SAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP----- 231

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            D   I+T                    AM SGF               +CG +  A+  
Sbjct: 232 -DRSMISTW------------------NAMISGFS--------------RCGMVEVAREF 258

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+++   D+++W+ MI G +  G    AL I+HQM+   + P +F    ++ A + L AL
Sbjct: 259 FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGAL 318

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           +QGR IH    +     D  +G SLVDMYAKCG I+ A+ +F++M  +    WNAM+ GL
Sbjct: 319 DQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGL 378

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           A HG  E+ + LF  M    + P+ +TF+GVL+AC++ GLV +    F+ MR++YG+EP+
Sbjct: 379 AMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQ 435

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +EHY  +VD LGRAG   EA +++ S+P E + ++  ALLGACR  G+ E G+ V + L+
Sbjct: 436 IEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILL 495

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----DL----------- 834
            LEP +S  Y LLSNI+A A +W++V   R  MK + +K  P     DL           
Sbjct: 496 ELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIG 555

Query: 835 ---------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI 885
                    I+  ++ + +R++  GY PD   VL D++EEEKE A++ HSEKLA  +GLI
Sbjct: 556 DGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLI 615

Query: 886 STPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           +T P + I                     + N+E +  +  R+HH R+G C C D
Sbjct: 616 NTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKD 670



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/451 (23%), Positives = 202/451 (44%), Gaps = 21/451 (4%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           ++++  +    NV LWN  +   ++  +   AI  +  M+ ++ + +  T+   L A + 
Sbjct: 90  SLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSD 149

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---DQFTLASVLRASS 401
              +  G Q+H   +K G      + +S I MY+  G +   R    D+      +  ++
Sbjct: 150 AGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 209

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            +   L   +      +       S +ST  A+I  + R G +  A   F+     D  +
Sbjct: 210 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 269

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+AMI GYI      +ALE+F  M     R  +  + + + AC  L  L QG+ +H YA 
Sbjct: 270 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 329

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           ++  +LD  + + ++DMY KCG +  A  +F  +   +  +W  MI G   +G  + A+ 
Sbjct: 330 RNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 389

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDM 637
           ++ +M ++   P+E TF  ++ A +    +++G  I  N ++ +   +P +     +VD+
Sbjct: 390 LFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIF-NSMRKEYGVEPQIEHYGCIVDL 445

Query: 638 YAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPD 693
             + G + +A  +   +    T  +W A+L    +HGN   GE   K+  ++     EP 
Sbjct: 446 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL-----EPQ 500

Query: 694 SVTFIGVLSAC-SYTGLVSEAYENFHLMREK 723
           +     +LS   +  G   E  E   LM+E+
Sbjct: 501 NSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 531



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 23/293 (7%)

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG-----AMVDAQSIFNDIPAPDD 558
           C   L   KQ HA  +++G   D  ++  ++  Y         +   +  +F+ +  P+ 
Sbjct: 43  CTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNV 102

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
             W  MI  C++N E   A+ +Y++M ++   P+++T+  ++KA S    + +G Q+HA+
Sbjct: 103 FLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAH 162

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGN-IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           L+K     D  +  S + MYA  G  +E   IL  +    + V WNAM+ G  + G  E 
Sbjct: 163 LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEA 222

Query: 678 TLKLFEDMKAHGVEPDS---VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
             +LFE M      PD     T+  ++S  S  G+V  A E F  M+E+  I      +S
Sbjct: 223 ARELFEGM------PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS-----WS 271

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRAL---LGACRVQGDTETGKWV 784
            ++D   + G   EA E+   M  E        L   L AC   G  + G+W+
Sbjct: 272 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWI 324



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/524 (20%), Positives = 197/524 (37%), Gaps = 92/524 (17%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY-----ARRLFDKMPDRDLI 120
           T+ L   K  HA IL +  + D ++  +L+  Y+   +  Y     + R+FD +   ++ 
Sbjct: 44  TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVF 103

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            WN ++     + E       +   L+  +  +    ++ T   +LK C  +G V     
Sbjct: 104 LWNCMIKVCIENNE-----PFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ 158

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAYAENG 239
           VH + +K GL  D  +  + + +Y+ FG++ EA+ + D    E D V W  M+  Y   G
Sbjct: 159 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG 218

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVL 299
             E    LF  +      PD   +     +IS   +    +V   A +        + + 
Sbjct: 219 EVEAARELFEGM------PDRSMISTWNAMISGFSRCGMVEV---AREFFDEMKERDEIS 269

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W+  + GY+Q G    A+E F  M +  ++         L+A A    L+ G+ IH    
Sbjct: 270 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 329

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
           ++      ++G SL++MY+K G +  L  + F   S    SS                  
Sbjct: 330 RNSIQLDGVLGTSLVDMYAKCGRI-DLAWEVFEKMSNKEVSS------------------ 370

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH----- 474
                      A+I     +G   +A  LF   D       N + F  +L+  +H     
Sbjct: 371 ---------WNAMIGGLAMHGRAEDAIDLFSKMD----INPNEITFVGVLNACAHGGLVQ 417

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           K L +F+ M        E  +   ++  GC                            I+
Sbjct: 418 KGLTIFNSMR------KEYGVEPQIEHYGC----------------------------IV 443

Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           D+  + G + +A+ + + IP  P    W  ++  C  +G  +L 
Sbjct: 444 DLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELG 487



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 6/191 (3%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG-----NIEDAYILFKQMDMR 657
           + C T+L   +Q HA +++     D ++  SLV  YA        + E +  +F  +   
Sbjct: 41  TQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 100

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N  LWN M+    ++    + + L+ +M      P+  T+  VL ACS  G+V+E  +  
Sbjct: 101 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ-V 159

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           H    K+G+  +    S  +      GR  EA  ++     E  A    A++      G+
Sbjct: 160 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGE 219

Query: 778 TETGKWVAEKL 788
            E  + + E +
Sbjct: 220 VEAARELFEGM 230



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 13/199 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    +   L  G+  H     +S   D  L  +L+ MY++CG +  A  +F+KM ++
Sbjct: 307 SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK 366

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ SWN+++   A    G AE+  + F         ITF        +L  C   G V  
Sbjct: 367 EVSSWNAMIGGLAM--HGRAEDAIDLFSKMDINPNEITFVG------VLNACAHGGLVQK 418

Query: 178 SETVHGYALKIGLVWDEFVS-GALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAY 235
             T+     K   V  +    G +V++  + G + EA+ +   +  E    +W  +L A 
Sbjct: 419 GLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGAC 478

Query: 236 AENG---FGEEVFHLFVDL 251
            ++G    GE V  + ++L
Sbjct: 479 RKHGNVELGERVGKILLEL 497


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  332 bits (851), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 225/712 (31%), Positives = 341/712 (47%), Gaps = 95/712 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           +N  +  Y  +G  H AI+ + +M+R  V  +  TF   L A +   +L  G+ IH    
Sbjct: 68  YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127

Query: 360 KSGFYSAVIVGNSLINMYSK---------------------------------------- 379
            +G ++ + V  +LI++Y +                                        
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187

Query: 380 ----MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK---NDTVADSFVSTAL 432
               M    GLR +  TL S+L   +     L     IH + ++           + TAL
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLLPLLAQ-HGALFQGTSIHAYCLRACLEQNEEQVLIGTAL 246

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           +D+Y +   +  A  +F      +  TW+A+I G++L +   +A  LF  M   G   L 
Sbjct: 247 LDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLS 306

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             ++A+A++ C  L  L  G Q+HA   KSG   DL  S+ +L MY K G + +A   F+
Sbjct: 307 ATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFD 366

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           +I   D +++  ++SGCV NG+ + A  ++ +M+   + PD  T   L+ A S L AL+ 
Sbjct: 367 EIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQH 426

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+  H ++I    + +  +  SL+DMYAKCG I+ +  +F +M  R+ V WN M+ G   
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG G+E   LF  MK  G  PD VTFI +++ACS++GLV+E    F  M  KYGI P +E
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY  +VD L R G   EA + I SMP +A   +  ALLGACR+  + + GK V+  +  L
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKL 606

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
            P  +  +VLLSNIF+AA ++D+    R   K K  KK P                    
Sbjct: 607 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQS 666

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              +  I+ +++ ++  IK+ GY  DT FVL D+EEEEKE+AL YHSEKLA A+G++S  
Sbjct: 667 HPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLN 726

Query: 889 PSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
               I   K                            NRFHH ++G C C +
Sbjct: 727 EDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGN 778



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 134/562 (23%), Positives = 231/562 (41%), Gaps = 93/562 (16%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
           G L  AR++FD++P  D  ++N+++ AY+  G  +A        L+RS+       ++ T
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHA-----AIDLYRSMLRFRVAPNKYT 102

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
              +LK C +   + A  T+H +A   GL  D FVS AL+++Y +  +   A+ +F  M 
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 222 ERDVVLWKVMLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-E 279
            RDVV W  ML  YA +G +   + HL       GL P+  ++  +L +++  G   +  
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 280 QVQAYAIKLLLYNNNSNV-------------------------------VLWNKKLSGYL 308
            + AY ++  L  N   V                               V W+  + G++
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLV-ALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
                  A   F +M+   + + S T +  AL   A   +L++G Q+H    KSG ++ +
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 368 IVGNSLINMYSKM--------------------------GCV-----------------C 384
              NSL++MY+K                           GCV                 C
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            +  D  T+ S++ A S L   L   K  H   I      ++ +  +LID+Y + G +  
Sbjct: 403 NMEPDIATMVSLIPACSHLA-ALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           +  +F+     D+ +WN MI GY +     +A  LF  M   G   D++T    + AC  
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521

Query: 505 LLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
             ++ +GK       H Y +    E  +C    ++D+  + G + +A      +P   DV
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEHYIC----MVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 560 -AWTTMISGCVDNGEEDLALSI 580
             W  ++  C  +   DL   +
Sbjct: 578 RVWGALLGACRIHKNIDLGKQV 599



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 9/368 (2%)

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ++ +   G +A A  +F+     D   +NA+I  Y      H A++L+  M       ++
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T    +KAC  L+ L+ G+ +HA+A  +G   DL VS+ ++D+Y++C     A+++F  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQ 611
           +P  D VAW  M++G  ++G    A++    M+   G+ P+  T   L+   +   AL Q
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 612 GRQIHANLIKLDCSSDP---FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           G  IHA  ++     +     +G +L+DMYAKC  +  A  +F  M +RN V W+A++ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIG-VLSACSYTGLVSEAYENFHLMREKYGIE 727
                   E   LF+DM   G+   S T +   L  C+    +    +  H +  K GI 
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ-LHALIAKSGIH 339

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
            ++   + L+    +AG   EA      +  + + S + ALL  C   G  E    V +K
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKK 398

Query: 788 LMA--LEP 793
           + A  +EP
Sbjct: 399 MQACNMEP 406



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S++   S LR   S +DL +G   HA I  S    D   +N+L++MY++ G +  A   F
Sbjct: 306 SATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFF 365

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D++  +D IS+ ++L+    +G+       E F +F+ ++         T+  L+  C  
Sbjct: 366 DEIAVKDTISYGALLSGCVQNGKAE-----EAFLVFKKMQACNMEPDIATMVSLIPACSH 420

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +   +  HG  +  GL  +  +  +L+++Y+K GKI  ++ +FD M  RDVV W  M
Sbjct: 421 LAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTM 480

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF+ +   G  PDD +  C++   S  G
Sbjct: 481 IAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  332 bits (850), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 301/582 (51%), Gaps = 46/582 (7%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +SGY + G+   AI  +V M+RS    D  TF   + + +G D+  L +Q+H
Sbjct: 163 NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLH 222

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK-----------------------------------M 380
              LKS F + +I  N+LI+MY+K                                   +
Sbjct: 223 AHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYEL 282

Query: 381 GCVCGLR---------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
             +C  R          ++F   S   A S L E     +QIH   IK    +D F   +
Sbjct: 283 EALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP-DCGRQIHGLCIKFGLGSDLFAGCS 341

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L D+Y + G +  A  +F + +  DL  WNA+I G+   +N+ ++   FS M  +G   +
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           ++T+ + + AC   +ML  G Q+H+Y +K GF LD+ V + +L MY KC  + DA  +F 
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE 461

Query: 552 DI-PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           DI    D V+W T+++ C+   +    L +   M  S + PD  T   ++ +S  + + E
Sbjct: 462 DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYE 521

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G QIH  ++K   + D  V  +L++MY KCG++E A  +F  +   + + W++++VG A
Sbjct: 522 VGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYA 581

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           Q G G+E  +LF  M+  GV+P+ +TF+G+L+ACS+ G+V E  + +  M+E Y I P  
Sbjct: 582 QAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTK 641

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EH S +VD L RAG    A + I  MPF     + + LL AC+V G+ E GK  AE ++ 
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           ++P +S+A V+L NI A++  W D    R  M+R +V K P 
Sbjct: 702 IDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPG 743



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 5/421 (1%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T   ++ A SSL   L   ++IH H +  +   D  +   ++ +Y + GS+ EA  +F++
Sbjct: 100 TYTHLINACSSL-RSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDS 158

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               ++ +W +MI GY        A+ L+  M  SG   D  T  + VK+C  L   K  
Sbjct: 159 MPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLA 218

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q+HA+ +KS F  DL   + ++ MY K   M DA ++F+ I   D ++W +MI+G    
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQL 278

Query: 572 GEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           G E  AL  + +M    V  P+EF F     A S L   + GRQIH   IK    SD F 
Sbjct: 279 GYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFA 338

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G SL DMYAKCG +E A  +F  ++  + V WNA++ G A   N +E+   F  M+  G+
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            P+ VT + +L ACS   +++   +  H    K G   ++   + L+    +     +A 
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQ-VHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDAL 457

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           ++   +  +A       LL AC  Q   + G+ +    +         +V L+N+  ++ 
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQ--NQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515

Query: 811 Q 811
           Q
Sbjct: 516 Q 516



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/626 (23%), Positives = 270/626 (43%), Gaps = 95/626 (15%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPD 87
           +NL   +L      QK   SSS   S  ++ L +A S+   L  G+  H  +L  +  PD
Sbjct: 75  KNLHREALKAFDIFQKC--SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPD 132

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             L N++++MY +CGSL  AR +FD MP ++++SW S+++ Y+  GE +         L+
Sbjct: 133 MILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEED-----NAITLY 187

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +  S       T   ++K C        +  +H + LK     D     AL+++Y+KF
Sbjct: 188 VQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKF 247

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV---- 263
            ++ +A  +F  +  +D++ W  M+  +++ G+  E    F ++    +   +E V    
Sbjct: 248 SQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSA 307

Query: 264 --QCVLGVISDLGKRHEEQVQAYAIKLLLYNN---------------------------- 293
              C   +  D G+    Q+    IK  L ++                            
Sbjct: 308 FSACSKLLEPDCGR----QIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             ++V WN  ++G+  V +   +   F  M  + +  + VT L  L A +    LN G Q
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQ 423

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSK---------------------------MGCV--- 383
           +H   +K GF   + V NSL++MYSK                             C+   
Sbjct: 424 VHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQN 483

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                           ++ D  TL +VL +S  +     +  QIH   +K+    D  VS
Sbjct: 484 QAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI-ASYEVGSQIHCFIMKSGLNLDISVS 542

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            ALI++Y + GS+  A  +F++    D+ +W+++I GY  +    +A ELF  M   G +
Sbjct: 543 NALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVK 602

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQ 547
            +EIT    + AC  + M+++G +++   M+  + +       S ++D+  + G +  A+
Sbjct: 603 PNEITFVGILTACSHIGMVEEGLKLYR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAE 661

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNG 572
                +P  PD V W T+++ C  +G
Sbjct: 662 DFIKQMPFVPDVVVWKTLLAACKVHG 687



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 150/276 (54%), Gaps = 4/276 (1%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           KA ++F     S   L  +T    + AC  L  L+ G+++H + +   ++ D+ + + IL
Sbjct: 83  KAFDIFQK--CSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            MY KCG++ +A+++F+ +P  + V+WT+MISG    GEED A+++Y QM  SG +PD F
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  +VK+ S L   +  RQ+HA+++K +  +D     +L+ MY K   + DA  +F ++
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDSVTFIGVLSACSYTGLVSEA 713
            +++ + W +M+ G +Q G   E L  F +M +  V +P+   F    SACS   L  + 
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKL-LEPDC 319

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
               H +  K+G+  ++     L D   + G  + A
Sbjct: 320 GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESA 355


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  332 bits (850), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 202/599 (33%), Positives = 309/599 (51%), Gaps = 48/599 (8%)

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           A + G+  +  +++M C   +R D  TLASVL A++ + + + + + +H  A K      
Sbjct: 188 AGLSGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVAD-VTMGRCVHSFAEKCGLAEH 246

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
             V T LI +Y + G +  A  LF+  +  DL  +NA+I GY ++     ++ LF+ + T
Sbjct: 247 EHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMT 306

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G   +  T+   +            + +H + +KSGF  +  VS+ I  ++ +   M  
Sbjct: 307 LGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMES 366

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+  F+ +P     +W  MISG   NG  ++A++++ QM    V P+  T +  + A + 
Sbjct: 367 ARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQ 426

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L AL  G+ +H  + + D   + +V  +L+DMYAKCG+I +A  +F  MD +N V WNAM
Sbjct: 427 LGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAM 486

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G   HG G E LKL++DM    + P S TF+ VL ACS+ GLV E ++ F  M + Y 
Sbjct: 487 IAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYA 546

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA-SASMHRALLGACRVQGDTETGKWV 784
           I P +EH + +VD LGRAG+ KEA ELI   P  A    +  ALLGAC V  D++  K  
Sbjct: 547 INPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLA 606

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------- 831
           ++KL  L+P +S  YVLLSN+  +  Q+ +    R E K + + K P             
Sbjct: 607 SQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHV 666

Query: 832 ----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
                     ++ I++ +E L  ++ E GY P+T+  L DVEEEEKE  +  HSEKLA A
Sbjct: 667 FMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIA 726

Query: 882 YGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           +GL+ST P + I   K                           A+RFHH RDG+C C D
Sbjct: 727 FGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGD 785



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 6/345 (1%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H  A+     AD+FV++AL  +Y     +  A  +F+     D   WN ++ G     +
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL----S 191

Query: 473 SHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
             +A+E F+ M   G  R D  T+A+ + A   +  +  G+ +H++A K G      V +
Sbjct: 192 GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
           G++ +Y KCG +  A+ +F+ +  PD VA+  +ISG   NG    +++++ ++   G+ P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  T   L+   S        + +H  ++K   +++  V  ++  ++ +  ++E A   F
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             M  +    WNAM+ G AQ+G  E  + LFE M    V P+ +T    LSAC+  G +S
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
              +  H +  +  +EP V   + L+D   + G   EA  +  +M
Sbjct: 432 LG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 179/419 (42%), Gaps = 49/419 (11%)

Query: 7   ANLKPRHKHTYVIFSSFTK-DTY------RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSI 59
           A+L+    H   +F  F + D +      R+LPS    LL F     FS + +++   ++
Sbjct: 62  ASLRAPTGHLLRLFRGFPRPDRFLRNALLRSLPSLRPRLL-FPCPDSFSFAFAATSLAAL 120

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
                  +     ++ HA  + +    D F+ + L  +Y     + +AR++FD +P  D 
Sbjct: 121 CSRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDT 180

Query: 120 ISWNSILAAYAHSG--EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + WN++LA  + S   E  A  V +G     S+R   T     TLA +L        V  
Sbjct: 181 VLWNTLLAGLSGSEAVESFARMVCDG-----SVRPDAT-----TLASVLPAAAEVADVTM 230

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              VH +A K GL   E V   L+++YSK G +  A+ LFD M++ D+V +  ++  Y+ 
Sbjct: 231 GRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSV 290

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESV----------------QCVLGVISDLGKRHEEQV 281
           NG      +LF +L   GL P+  ++                QC+ G +   G      V
Sbjct: 291 NGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPV 350

Query: 282 QAYAIKLLLYNNN-------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                 L    N+               +  WN  +SGY Q G    A+  F  M++ NV
Sbjct: 351 STAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNV 410

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           + + +T    L+A A    L+LG+ +H    +      V V  +LI+MY+K G +   R
Sbjct: 411 RPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEAR 469



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 34/313 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L  A   +D+ +G+  H+            +   L+++YS+CG +  AR LFD M   
Sbjct: 217 SVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKP 276

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+++N++++ Y+ +G      V     LF  L     + +  TL  L+ +    G+   
Sbjct: 277 DLVAYNALISGYSVNG-----MVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLL 331

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           ++ +HG+ LK G   +  VS A+  ++ +   +  A+  FD M E+ +  W  M+  YA+
Sbjct: 332 AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------------KRHEEQVQAYA 285
           NG  E    LF  + +  + P+  ++   L   + LG               + +   Y 
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451

Query: 286 IKLLL---------------YN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +  L+               +N  +N NVV WN  ++GY   G    A++ + +M+ +++
Sbjct: 452 MTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511

Query: 329 QYDSVTFLVALAA 341
              S TFL  L A
Sbjct: 512 LPTSATFLSVLYA 524



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 159/355 (44%), Gaps = 51/355 (14%)

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +HA A+ +G+  D  V+S +  +Y     +  A+ +F+ +P+PD V W T+++G   +G 
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL--SGS 193

Query: 574 EDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           E  A+  + +M   G V PD  T A ++ A++ +  +  GR +H+   K   +    V  
Sbjct: 194 E--AVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
            L+ +Y+KCG++E A  LF  M+  + V +NA++ G + +G    ++ LF ++   G+ P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311

Query: 693 DSVTFIGVLSACSYTG---------------------LVSEAYENFHL-------MREKY 724
           +S T + ++   S  G                      VS A    H         R+ +
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371

Query: 725 GIEPE--VEHYSFLVDALGRAGRTKEAGELILSM--------PFEASASMHRALLGACRV 774
              PE  +E ++ ++    + G T+ A  L   M        P   S++     L AC  
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISST-----LSACAQ 426

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVL--LSNIFAAANQWDDVTSARGEMKRKNV 827
            G    GKW+  +++  E  + + YV+  L +++A      +       M  KNV
Sbjct: 427 LGALSLGKWL-HRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 13/224 (5%)

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           LL +  H  +L S    +  ++  + T++ R   +  AR+ FD MP++ + SWN++++ Y
Sbjct: 330 LLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGY 389

Query: 130 AHSGEGNAENVTE-GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           A +G      +TE    LF  + +     + +T++  L  C   G +   + +H    + 
Sbjct: 390 AQNG------LTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            L  + +V  AL+++Y+K G I EA+ +F+ M  ++VV W  M+  Y  +G G E   L+
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 249 VDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAI 286
            D+  + L P   +   VL      G++ +  K        YAI
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAI 547



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 14/150 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H  I      P+ ++   L+ MY++CGS+  ARR+F+ M +++++SWN+++A 
Sbjct: 430 LSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAG 489

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV---WA--SETVHG 183
           Y   G+G      E  +L++ + ++    +  T   +L  C   G V   W         
Sbjct: 490 YGLHGQG-----AEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDD 544

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREA 213
           YA+  G+   E  +  +V++  + G+++EA
Sbjct: 545 YAINPGI---EHCT-CMVDLLGRAGQLKEA 570


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 301/582 (51%), Gaps = 46/582 (7%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +SGY + G+   AI  +V M+RS    D  TF   + + +G D+  L +Q+H
Sbjct: 163 NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLH 222

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK-----------------------------------M 380
              LKS F + +I  N+LI+MY+K                                   +
Sbjct: 223 AHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYEL 282

Query: 381 GCVCGLR---------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
             +C  R          ++F   S   A S L E     +QIH   IK    +D F   +
Sbjct: 283 EALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP-DCGRQIHGLCIKFGLGSDLFAGCS 341

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L D+Y + G +  A  +F + +  DL  WNA+I G+   +N+ ++   FS M  +G   +
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           ++T+ + + AC   +ML  G Q+H+Y +K GF LD+ V + +L MY KC  + DA  +F 
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE 461

Query: 552 DI-PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           DI    D V+W T+++ C+   +    L +   M  S + PD  T   ++ +S  + + E
Sbjct: 462 DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYE 521

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G QIH  ++K   + D  V  +L++MY KCG++E A  +F  +   + + W++++VG A
Sbjct: 522 VGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYA 581

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           Q G G+E  +LF  M+  GV+P+ +TF+G+L+ACS+ G+V E  + +  M+E Y I P  
Sbjct: 582 QAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTK 641

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EH S +VD L RAG    A + I  MPF     + + LL AC+V G+ E GK  AE ++ 
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           ++P +S+A V+L NI A++  W D    R  M+R +V K P 
Sbjct: 702 IDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPG 743



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 5/421 (1%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           T   ++ A SSL   L   ++IH H +  +   D  +   ++ +Y + GS+ EA  +F++
Sbjct: 100 TYTHLINACSSL-RSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDS 158

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               ++ +W +MI GY        A+ L+  M  SG   D  T  + VK+C  L   K  
Sbjct: 159 MPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLA 218

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q+HA+ +KS F  DL   + ++ MY K   M DA ++F+ I   D ++W +MI+G    
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQL 278

Query: 572 GEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           G E  AL  + +M    V  P+EF F     A S L   + GRQIH   IK    SD F 
Sbjct: 279 GYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFA 338

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G SL DMYAKCG +E A  +F  ++  + V WNA++ G A   N +E+   F  M+  G+
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            P+ VT + +L ACS   +++   +  H    K G   ++   + L+    +     +A 
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQ-VHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDAL 457

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           ++   +  +A       LL AC  Q   + G+ +    +         +V L+N+  ++ 
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQ--NQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515

Query: 811 Q 811
           Q
Sbjct: 516 Q 516



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 150/626 (23%), Positives = 270/626 (43%), Gaps = 95/626 (15%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPD 87
           +NL   +L      QK   SSS   S  ++ L +A S+   L  G+  H  +L  +  PD
Sbjct: 75  KNLHREALKAFDIFQKC--SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPD 132

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             L N++++MY +CGSL  AR +FD MP ++++SW S+++ Y+  GE +         L+
Sbjct: 133 MILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEED-----NAITLY 187

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +  S       T   ++K C        +  +H + LK     D     AL+++Y+KF
Sbjct: 188 VQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKF 247

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV---- 263
            ++ +A  +F  +  +D++ W  M+  +++ G+  E    F ++    +   +E V    
Sbjct: 248 SQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSA 307

Query: 264 --QCVLGVISDLGKRHEEQVQAYAIKLLLYNN---------------------------- 293
              C   +  D G+    Q+    IK  L ++                            
Sbjct: 308 FSACSKLLEPDCGR----QIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             ++V WN  ++G+  V +   +   F  M  + +  + VT L  L A +    LN G Q
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQ 423

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSK---------------------------MGCV--- 383
           +H   +K GF   + V NSL++MYSK                             C+   
Sbjct: 424 VHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQN 483

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                           ++ D  TL +VL +S  +     +  QIH   +K+    D  VS
Sbjct: 484 QAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI-ASYEVGSQIHCFIMKSGLNLDISVS 542

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            ALI++Y + GS+  A  +F++    D+ +W+++I GY  +    +A ELF  M   G +
Sbjct: 543 NALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVK 602

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQ 547
            +EIT    + AC  + M+++G +++   M+  + +       S ++D+  + G +  A+
Sbjct: 603 PNEITFVGILTACSHIGMVEEGLKLYR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAE 661

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNG 572
                +P  PD V W T+++ C  +G
Sbjct: 662 DFIRQMPFVPDVVVWKTLLAACKVHG 687



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 169/330 (51%), Gaps = 5/330 (1%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           KA ++F     S   L  +T    + AC  L  L+ G+++H + +   ++ D+ + + IL
Sbjct: 83  KAFDIFQK--CSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            MY KCG++ +A+++F+ +P  + V+WT+MISG    GEED A+++Y QM  SG +PD F
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  +VK+ S L   +  RQ+HA+++K +  +D     +L+ MY K   + DA  +F ++
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDSVTFIGVLSACSYTGLVSEA 713
            +++ + W +M+ G +Q G   E L  F +M +  V +P+   F    SACS   L  + 
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKL-LEPDC 319

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
               H +  K+G+  ++     L D   + G  + A  +   +      + +  + G   
Sbjct: 320 GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFAS 379

Query: 774 VQGDTETGKWVAE-KLMALEPFDSSAYVLL 802
           V    E+  + ++ +   L P D +   LL
Sbjct: 380 VSNAKESSSFFSQMRHTGLVPNDVTVLSLL 409


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 260/946 (27%), Positives = 415/946 (43%), Gaps = 132/946 (13%)

Query: 90   LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
            L N +++M  R G + +A R+F KMP+RD+ SWN ++  Y     G    + E   L+  
Sbjct: 133  LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGY-----GKVGFLEEALDLYYR 187

Query: 150  LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
            +  +       T   +L+ C           VH + L+ G   +  V  ALV +Y+K G 
Sbjct: 188  MLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGD 247

Query: 210  IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD---DESVQCV 266
            I  A+ +FDGM   D + W  M+  + EN   E    LF+ +  + + P+     SV   
Sbjct: 248  IVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA 307

Query: 267  LGVISDLGKRHEEQ------------------VQAY--------AIKLLLYNNNSNVVLW 300
             G++S++G   E                    +Q Y        A K+       + + W
Sbjct: 308  SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSW 367

Query: 301  NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
               +SGY + G    A+E +  M   NV  D VT   ALAA A    L++G ++H     
Sbjct: 368  TAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQN 427

Query: 361  SGFYSAVIVGNSLINMYSK-------------------------MGCVC----------- 384
             GF   V+V N+L+ MY+K                         +   C           
Sbjct: 428  KGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYY 487

Query: 385  ------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                   ++ +  T  + L A ++    L   K+IH + ++    ++ +V  AL+D+Y +
Sbjct: 488  FRYMLGHVKPNSVTFIAALSACAA-TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVK 546

Query: 439  NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIAT 497
             G  + A   F      D+ +WN M+ G++       AL LF+ M +TS  R+   +   
Sbjct: 547  CGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALA 606

Query: 498  AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            A    G    L  G ++H  A   GF   + V++ +L+MY K   +  A  +F  +   D
Sbjct: 607  ACACLG---RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 663

Query: 558  DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
             V+W++MI+G   N     AL  +  M L  V P+  TF   + A +   AL  G++IHA
Sbjct: 664  VVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHA 722

Query: 618  NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             +++    S+ +V  +L+D+Y KCG    A+  F     ++ V WN ML G   HG G+ 
Sbjct: 723  YVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDI 782

Query: 678  TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
             L LF  M   G  PD VTF+ ++ ACS  G+V + +E FH   EK+ I P ++HY+ +V
Sbjct: 783  ALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMV 841

Query: 738  DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
            D L R G+  EA  LI  MP +  A++  ALL  CR+    E G+  A+ ++ LEP D +
Sbjct: 842  DLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVA 901

Query: 798  AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
             +VLL +++  A +W  V   R  M+ K +++D                           
Sbjct: 902  YHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKE 961

Query: 835  IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVIL 894
            I   + G+ +R+K  G+ P      L+ +E  ++  L  HSE+LA A+GLI+T P + I 
Sbjct: 962  INVVLHGIYERMKACGFAPVES---LEDKEVSEDDILCGHSERLAVAFGLINTTPGTTIS 1018

Query: 895  SNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
              K                             + H  +DG C C D
Sbjct: 1019 VTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 179/712 (25%), Positives = 330/712 (46%), Gaps = 85/712 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR      D  +G+  HA +L      +  + N L+TMY++CG +V AR++FD M   D
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTD 262

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            ISWN+++A +  + E  A     G  LF ++ E+    + +T+  +         V  +
Sbjct: 263 CISWNAMIAGHFENHECEA-----GLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFA 317

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +HG+A+K G   D     +L+ +Y+  G++ +A  +F  M+ +D + W  M+  Y +N
Sbjct: 318 KEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKN 377

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHE-EQVQAY------- 284
           GF ++   ++  +    + PDD ++   L   + LG      K HE  Q + +       
Sbjct: 378 GFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVA 437

Query: 285 ---------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                          AI++  +    +VV W+  ++G+     +  A+  F  M+  +V+
Sbjct: 438 NALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVK 496

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----- 384
            +SVTF+ AL+A A T  L  G++IH   L+ G  S   V N+L+++Y K G        
Sbjct: 497 PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQ 556

Query: 385 -GLRTDQFTLASVLRASSSLPEGL--------------------------------HLSK 411
             + +++  ++  +  S  +  GL                                 L  
Sbjct: 557 FSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGRLDV 616

Query: 412 QIHVHAIKNDT--VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            I +H +  +   +    V+ AL+++Y ++  + +A  +F+     D+ +W++MI G+  
Sbjct: 617 GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCF 676

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++ S  AL  F +M     + + +T   A+ AC     L+ GK++HAY ++ G   +  V
Sbjct: 677 NHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 735

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +LD+YVKCG    A + F+     D V+W  M+SG V +G  D+ALS+++QM   G 
Sbjct: 736 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 795

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            PDE TF ++   S     ++     H    K     +      +VD+ ++ G + +AY 
Sbjct: 796 HPDEVTFVLMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYN 855

Query: 650 LFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTF 697
           L  +M ++ +  +W A+L G   H +   GE   K+  ++     EP+ V +
Sbjct: 856 LINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILEL-----EPNDVAY 902



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 5/276 (1%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           + +S E  DE       + C     +  G +  A A        L + + +L M V+ G 
Sbjct: 87  LESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGE 146

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +  A  +F  +P  D  +W  M+ G    G  + AL +Y++M  +G+ PD +TF  +++ 
Sbjct: 147 IWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRT 206

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
              +     GR++HA++++     +  V  +LV MYAKCG+I  A  +F  M M + + W
Sbjct: 207 CGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISW 266

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA--YENFHLM 720
           NAM+ G  ++   E  L+LF  M  + V+P+ +T   V  A   +G++SE    +  H  
Sbjct: 267 NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA---SGMLSEVGFAKEMHGF 323

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
             K G   +V   + L+      GR  +AG++   M
Sbjct: 324 AVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM 359



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 41/320 (12%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S  + + L    +T  L  GK  HA +L      + ++ N L+ +Y +CG   YA   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS--RLTLAPLLKLC 169
               ++D++SWN +L+ +   G G+         +  SL   + +TS  R+     L  C
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGD---------IALSLFNQMMYTSLGRMGACSALAAC 608

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
              G +     +H  A   G +    V+ AL+ +Y+K   I +A  +F  M E+DVV W 
Sbjct: 609 ACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWS 668

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK- 287
            M+  +  N    +  + F  +    + P+  +    L   +  G  R  +++ AY ++ 
Sbjct: 669 SMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 727

Query: 288 ------------LLLY---------------NNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                       L LY               ++  +VV WN  LSG++  G    A+  F
Sbjct: 728 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 787

Query: 321 VNMIRSNVQYDSVTFLVALA 340
             M+      D VTF++  A
Sbjct: 788 NQMVEMGEHPDEVTFVLMCA 807



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 21/232 (9%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S  + + L    +T  L  GK  HA +L      + ++ N L+ +Y +CG   YA   F
Sbjct: 697 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 756

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
               ++D++SWN +L+ +   G G+         LF  + E       +T   L+  C  
Sbjct: 757 SVHSEKDVVSWNIMLSGFVAHGLGDI-----ALSLFNQMVEMGEHPDEVTFV-LMCACSR 810

Query: 172 SGYV---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVL 227
           +G V   W  E  H    K  +V +      +V++ S+ GK+ EA  L + M  + D  +
Sbjct: 811 AGMVIQGW--ELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 868

Query: 228 WKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGK 275
           W  +L   R +     GE    + ++L      P+D +   +L  + +D GK
Sbjct: 869 WGALLNGCRIHRHVELGELAAKVILELE-----PNDVAYHVLLCDLYTDAGK 915


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 234/725 (32%), Positives = 350/725 (48%), Gaps = 92/725 (12%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL    + SN+V +N  +SGY+Q+ +    +  F    R  ++ D      AL A + 
Sbjct: 20  ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQ 79

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
           + NL+ G+ IHG  L  G  S V++ NSLI+MYSK G V                     
Sbjct: 80  SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 139

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHL-SKQIHVHAIKN 420
                                  GL  + +TL S L+A SS   G  +    +H HAIK 
Sbjct: 140 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 199

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-----SHK 475
               D  V TAL+D+Y + GS+ +A  +F+     ++  +NAM+ G +         ++K
Sbjct: 200 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 259

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL LF  M + G +    T ++ +KAC  +   K  KQ+HA   K+G   D  + S ++D
Sbjct: 260 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 319

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y   G+M+DA   FN I     V  T MI G + NGE + ALS+++++      PDEF 
Sbjct: 320 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFI 379

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ ++ + + +  L  G QI  +  K+  S       S + MYAK G++  A + F+QM+
Sbjct: 380 FSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME 439

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             + V W+ M+   AQHG+  E L+ FE MK+ G+EP+   F+GVL ACS+ GLV E   
Sbjct: 440 NPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 499

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  M + Y ++  V+H   +VD LGRAGR  +A  LIL + FE    M RALL ACR+ 
Sbjct: 500 YFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 559

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---- 831
            DT T + VA+K++ LEP  S++YVLL NI+  A      +  R  M+ + +KK+P    
Sbjct: 560 KDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSW 619

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVE-------------EEEKERALYYHS 875
               D +++ V G       G      D +L   +             E E    + YHS
Sbjct: 620 IQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHS 679

Query: 876 EKLARAYGLI---STPPSSV------------------ILSNKEPLYAN--RFHHLRDGM 912
           EKLA A+G++    + P  V                  I+  +E +  +  RFHH +DG 
Sbjct: 680 EKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGS 739

Query: 913 CPCAD 917
           C C D
Sbjct: 740 CSCGD 744



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 150/275 (54%), Gaps = 7/275 (2%)

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
           C+ G    A+ LF+     ++ T+N++I GY+  +N  K + LF      G +LD+   A
Sbjct: 12  CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
            A+ AC     L  GK +H   +  G    + +++ ++DMY KCG +  A+ +F+     
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA-SSCLTALEQ-GRQ 614
           D V+W ++I+G V NG+ +  L+I  +M  +G+  + +T    +KA SS     +  G  
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H + IKL    D  VG +L+DMYAK G+++DA  +F QM  +N V++NAM+ GL Q   
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251

Query: 675 GEE-----TLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            E+      L LF +MK+ G++P   T+  +L AC
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC 286



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 118/553 (21%), Positives = 231/553 (41%), Gaps = 93/553 (16%)

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           +CG    A +LFDKM   +++++NS+++ Y         N+ +   LF   R       +
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ-----MSNLDKVMILFDKARRLGLKLDK 67

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
              A  L  C  SG + A + +HG  L  GL     ++ +L+++YSK G++  A+ LFD 
Sbjct: 68  YNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH 127

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS---DLGKR 276
             + D V W  ++  Y +NG  EE+  +   +H++GL  +  ++   L   S   +  K 
Sbjct: 128 SDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKM 187

Query: 277 HEEQVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYL 308
               +  +AIKL L+ +                            + NVV++N  ++G L
Sbjct: 188 FGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLL 247

Query: 309 Q---VGDN--HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           Q   + D   + A+  F  M    ++    T+   L A    ++    +Q+H    K+G 
Sbjct: 248 QQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL 307

Query: 364 YSAVIVGNSLINMYSKMG-------CVCGL------------------------------ 386
            S   +G+ LI++YS +G       C   +                              
Sbjct: 308 LSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYE 367

Query: 387 ------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
                 + D+F  ++++ + +++   L   +QI  HA K      +    + I +Y ++G
Sbjct: 368 LLTYEEKPDEFIFSTIMSSCANMGM-LRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSG 426

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            +  A   F+  +  D+ +W+ MI       ++ +AL  F  M + G   +       + 
Sbjct: 427 DLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLI 486

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDL----CVSSGILDMYVKCGAMVDAQSIFNDIP-A 555
           AC    ++++G + +   M+  +++ L    CV   ++D+  + G + DA+S+   +   
Sbjct: 487 ACSHRGLVEEGLR-YFDTMEKDYKMKLHVKHCVC--VVDLLGRAGRLADAESLILRLGFE 543

Query: 556 PDDVAWTTMISGC 568
            + V W  ++S C
Sbjct: 544 HEPVMWRALLSAC 556



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 4/238 (1%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D  +   L+ MY++ GSL  A ++FD+M D++++ +N+++A          +   +   L
Sbjct: 204 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 263

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  ++      S  T + LLK C+       ++ VH    K GL+ DE++   L+++YS 
Sbjct: 264 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 323

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + +A   F+ +    +V    M+  Y +NG  E    LF +L      PD+     +
Sbjct: 324 LGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTI 383

Query: 267 LGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +   +++G  R  EQ+Q +A K+ +   +   +  N ++  Y + GD + A   F  M
Sbjct: 384 MSSCANMGMLRSGEQIQGHATKVGI---SRFTIFQNSQIWMYAKSGDLYAANLTFQQM 438



 Score = 39.3 bits (90), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 31/230 (13%)

Query: 16  TYVIFSSFTKDTYRNLPSFSLSLLPFLQKSH---FSSSSSSSQWFSILRHAISTSDLLLG 72
           T +IF       + +  S    LL + +K     FS+  SS     +LR    + + + G
Sbjct: 346 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLR----SGEQIQG 401

Query: 73  KSTHARILNSSQIPDRF--LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
            +T   I        RF    N+ + MY++ G L  A   F +M + D++SW++++ + A
Sbjct: 402 HATKVGI-------SRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNA 454

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETVHGYA 185
             G     +  E  R F  ++      +      +L  C   G V     +       Y 
Sbjct: 455 QHG-----HAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYK 509

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           +K+ +         +V++  + G++ +A+ L   +  E + V+W+ +L A
Sbjct: 510 MKLHVKH----CVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 555


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 222/719 (30%), Positives = 360/719 (50%), Gaps = 100/719 (13%)

Query: 294 NSNVVLWNKK-LSGYLQVGDNHGAIECFVNMIRSNVQYD--SVTFLVALAAVAGTDNLNL 350
           N+N++  N + LS   +   +    E    M+R+ + +D  S + L   +A++    L+ 
Sbjct: 18  NNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDY 77

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------MGCVCGLRTDQFTLASVL 397
            + +     +   Y+     N+LI  Y+              +   C    ++FT   V+
Sbjct: 78  ARNLFDQIPQPNLYT----WNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVI 133

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           +A+S L +   +   +H  AIK     D ++  +L+  Y   G ++ AE LF+     D+
Sbjct: 134 KAASEL-KASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDV 192

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +WN+MI  +   N    ALELF  M       + +T+   + AC   L L+ G+ + +Y
Sbjct: 193 VSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSY 252

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV-------- 569
             + G ++DL + + +LDMY KCG++ DAQ +F+++P  D  +WT M+ G          
Sbjct: 253 IERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAA 312

Query: 570 -----------------------DNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSC 605
                                   NG+   AL+I+++++LS +  PDE T    + A + 
Sbjct: 313 RLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQ 372

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L A++ G  IH  + +     +  +  SLVDMYAKCG++E A  +F  ++ R+  +W+AM
Sbjct: 373 LGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAM 432

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + GL  HG G+  + LF +M+   V+P+SVTF  VL ACS+ GLV E    FH M   YG
Sbjct: 433 IAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYG 492

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           + PE++HY+ +VD LGRAG  +EA ELI  M    SAS+  ALLGAC +  + E G+  +
Sbjct: 493 VVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELAS 552

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
           ++L+ LEP +  A VLLSNI+A   +W+ V+  R  M+   +KK+P              
Sbjct: 553 DQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEF 612

Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE-KERALYYHSEKLARA 881
                    +  I++K+E +  ++K  GY P+   +L  +EE++ KE+AL  HSEKLA A
Sbjct: 613 LVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIA 672

Query: 882 YGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           +GL++  PS  I                     + +++ L  +  RFHH RDG C C D
Sbjct: 673 FGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMD 731



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 224/508 (44%), Gaps = 22/508 (4%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HAR+L +    D F  + L T    S   +L YAR LFD++P  +L +WN+++ AYA
Sbjct: 42  KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYA 101

Query: 131 HSGEGNAENVTEGFRLFRSLRESIT-FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            S +       + F +F  L +      ++ T   ++K             VHG A+K+ 
Sbjct: 102 SSSDP-----FQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLS 156

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D ++  +LV  Y   G +  A+ LF G+  +DVV W  M+ A+A+    E+   LF+
Sbjct: 157 FGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFL 216

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLWNKKLSGYL 308
            + R  + P+  +   ++GV+S   K+ + +   +    +       ++ L N  L  Y 
Sbjct: 217 KMERENVMPNSVT---MVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYT 273

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL------GQQIHGTTLKSG 362
           + G    A + F  M   +V +     L   A +   D   L       ++I    +   
Sbjct: 274 KCGSVDDAQKLFDEMPERDV-FSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLIS 332

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
            Y         + +++++      + D+ TL S L A + L   + L   IHV+  +   
Sbjct: 333 AYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLG-AIDLGGWIHVYIKREGI 391

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V +  + ++L+D+Y + GS+ +A  +F + +  D+  W+AMI G  +      A++LF  
Sbjct: 392 VLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFE 451

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCG 541
           M  +  + + +T    + AC    ++ +G+   H      G   ++   + ++D+  + G
Sbjct: 452 MQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAG 511

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGC 568
            + +A  + N++   P    W  ++  C
Sbjct: 512 FLEEAMELINEMSTTPSASVWGALLGAC 539



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 29/279 (10%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           N P  +L L  FL+    +   +S     +L       DL  G+   + I       D  
Sbjct: 206 NCPEDALEL--FLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLT 263

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT-------- 141
           L N ++ MY++CGS+  A++LFD+MP+RD+ SW  +L  YA  G+ +A  +         
Sbjct: 264 LCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKE 323

Query: 142 ------------------EGFRLFRSLRES-ITFTSRLTLAPLLKLCLSSGYVWASETVH 182
                             E   +F  L+ S I     +TL   L  C   G +     +H
Sbjct: 324 IAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIH 383

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
            Y  + G+V +  +  +LV++Y+K G + +A  +F  ++ERDV +W  M+     +G G+
Sbjct: 384 VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGK 443

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
               LF ++  + + P+  +   VL   S  G   E +V
Sbjct: 444 AAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRV 482


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 234/725 (32%), Positives = 350/725 (48%), Gaps = 92/725 (12%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL    + SN+V +N  +SGY+Q+ +    +  F    R  ++ D  T   AL A + 
Sbjct: 113 ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQ 172

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
           + NL+ G+ IHG  L  G  S V++ NSLI+MYSK G V                     
Sbjct: 173 SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 232

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHL-SKQIHVHAIKN 420
                                  GL  + +TL S L+A SS   G  +    +H HAIK 
Sbjct: 233 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 292

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-----SHK 475
               D  V TAL+D+Y + GS+ +A  +F+     ++  +NAM+ G +         ++K
Sbjct: 293 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 352

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL LF  M + G +    T ++ +KAC  +   K  KQ+HA   K+G   D  + S ++D
Sbjct: 353 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 412

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y   G+M+DA   FN I     V  T MI G + NGE + ALS+++++      PDEF 
Sbjct: 413 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFI 472

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            + ++ + + +  L  G QI  +  K+  S       S + MYAK G++  A + F+QM+
Sbjct: 473 XSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME 532

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             + V W+ M+   AQHG+  E L+ FE MK+ G+EP+   F+GVL ACS+ GLV E   
Sbjct: 533 NPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 592

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  M + Y ++  V+H   +VD LGRAGR  +A  LIL + FE    M RALL ACR+ 
Sbjct: 593 YFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 652

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---- 831
            DT T + VA+K++ LEP  S++YVLL NI+  A      +  R  M+ + +KK+P    
Sbjct: 653 KDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSW 712

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVE-------------EEEKERALYYHS 875
               D +++ V G       G      D +L   +             E E    + YHS
Sbjct: 713 IQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHS 772

Query: 876 EKLARAYGLI---STPPSSV------------------ILSNKEPLYAN--RFHHLRDGM 912
           EKLA A+G++    + P  V                  I+  +E +  +  RFHH +DG 
Sbjct: 773 EKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGS 832

Query: 913 CPCAD 917
           C C D
Sbjct: 833 CSCGD 837



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 166/661 (25%), Positives = 282/661 (42%), Gaps = 104/661 (15%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  +  +++ A  T  L  GK  H+ ++ +S  P  FL NNL+ MY +CG    A +LFD
Sbjct: 59  SVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFD 118

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           KM   +++++NS+++ Y         N+ +   LF   R       + T A  L  C  S
Sbjct: 119 KMSKSNIVTYNSLISGYVQ-----MSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQS 173

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G + A + +HG  L  GL     ++ +L+++YSK G++  A+ LFD   + D V W  ++
Sbjct: 174 GNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLI 233

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS---DLGKRHEEQVQAYAIKLL 289
             Y +NG  EE+  +   +H++GL  +  ++   L   S   +  K     +  +AIKL 
Sbjct: 234 AGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLG 293

Query: 290 LYNN----------------------------NSNVVLWNKKLSGYLQ---VGDN--HGA 316
           L+ +                            + NVV++N  ++G LQ   + D   + A
Sbjct: 294 LHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKA 353

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           +  F  M    ++    T+   L A    ++    +Q+H    K+G  S   +G+ LI++
Sbjct: 354 LNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDL 413

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           YS +G                    S+ + L     IH     N T+      TA+I  Y
Sbjct: 414 YSVLG--------------------SMMDALLCFNSIH-----NLTIVP---MTAMIXGY 445

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            +NG        FE+                        AL LF  + T  E+ DE   +
Sbjct: 446 LQNGE-------FES------------------------ALSLFYELLTYEEKPDEFIXS 474

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           T + +C  + ML+ G+Q+  +A K G        +  + MY K G +  A   F  +  P
Sbjct: 475 TIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENP 534

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V+W+TMI     +G    AL  +  M+  G+ P+ F F  ++ A S    +E+G +  
Sbjct: 535 DIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYF 594

Query: 617 ANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRN-TVLWNAMLVGLAQHG 673
             + K D      V   + +VD+  + G + DA  L  ++   +  V+W A+L     H 
Sbjct: 595 DTMEK-DYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHK 653

Query: 674 N 674
           +
Sbjct: 654 D 654



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 175/328 (53%), Gaps = 11/328 (3%)

Query: 388 TDQFTLASV----LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           +  F L SV    L  S++    L+  K +H H IK       F+   L+++YC+ G   
Sbjct: 52  SSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTR 111

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A+ LF+     ++ T+N++I GY+  +N  K + LF      G +LD+ T A A+ AC 
Sbjct: 112 SADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACS 171

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
               L  GK +H   +  G    + +++ ++DMY KCG +  A+ +F+     D V+W +
Sbjct: 172 QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNS 231

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA-SSCLTALEQ-GRQIHANLIK 621
           +I+G V NG+ +  L+I  +M  +G+  + +T    +KA SS     +  G  +H + IK
Sbjct: 232 LIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIK 291

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE---- 677
           L    D  VG +L+DMYAK G+++DA  +F QM  +N V++NAM+ GL Q    E+    
Sbjct: 292 LGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAY 351

Query: 678 -TLKLFEDMKAHGVEPDSVTFIGVLSAC 704
             L LF +MK+ G++P   T+  +L AC
Sbjct: 352 KALNLFFEMKSCGIKPSMFTYSSLLKAC 379



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 5/293 (1%)

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           E +D + +  +    G    L  GK +H++ +K+ F   L + + +L+MY KCG    A 
Sbjct: 58  ESVDYVKLVQSATKTG---KLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSAD 114

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +   + V + ++ISG V     D  + ++ + R  G+  D++T A  + A S   
Sbjct: 115 KLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSG 174

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            L  G+ IH  ++     S   +  SL+DMY+KCG ++ A ILF   D  + V WN+++ 
Sbjct: 175 NLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIA 234

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN-FHLMREKYGI 726
           G  Q+G  EE L + + M  +G+  ++ T    L ACS      + +    H    K G+
Sbjct: 235 GYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGL 294

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
             +V   + L+D   + G   +A ++   M  + +  M+ A++     Q   E
Sbjct: 295 HLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQQETIE 346


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/592 (32%), Positives = 318/592 (53%), Gaps = 64/592 (10%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           ++    S+L+AS+ L     L+  +H   ++    +D +++ ALI+ Y +  +  +   +
Sbjct: 109 NRHVFPSLLKASTLLKHH-KLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDV 167

Query: 449 FEN---------KDGFDL------ATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDE 492
           F           K  FD+       +WN +I G+  +    +AL++   M  +G+ + D 
Sbjct: 168 FPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDS 227

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+++ +      + + +GK++H YA+++GF+ D+ + S ++DMY KC  +  +   F  
Sbjct: 228 FTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYI 287

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  D ++W ++I+GCV NGE D  L  + +M    V P   +F+ ++ A + LTAL  G
Sbjct: 288 LPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLG 347

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           RQ+H  +++L    + F+  SLVDMYAKCGNI+ A  +F ++D R+ V W A+++G A H
Sbjct: 348 RQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMH 407

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+  + + LFE+M   GV P  V F+ VL+ACS+ GLV E +  F+ M   +GI P +EH
Sbjct: 408 GHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEH 467

Query: 733 YSFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           Y+ + D LGRAGR +EA + I +M   + + S+   LL ACR     E  + V +KL+++
Sbjct: 468 YAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSV 527

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
           +  +  AYVL+SNI++AA +W D    R  M++K +KK PA                   
Sbjct: 528 DSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKS 587

Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
               D I   ++ L++++++ GYV DT+ VL DV+EE K   L+ HSE+LA AYG+IST 
Sbjct: 588 HPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTT 647

Query: 889 PSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCAD 917
             + I   K                            +RFHH ++G C C D
Sbjct: 648 AGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGD 699



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 174/382 (45%), Gaps = 23/382 (6%)

Query: 388 TDQFTLASVLRAS--SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           + Q T++ +LR +   +L      +KQ+H H +K      S     L+     N ++ + 
Sbjct: 4   STQHTISKILRKTPNKTLSVSTRQAKQLHAHIVKTKGTLHS--DNILVLSLYSNLNLLQH 61

Query: 446 E-YLFENKDGFDLA-TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
             +LF +         W+++I  Y   +  H +   F+ M +     +     + +KA  
Sbjct: 62  SLHLFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKAST 121

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK---CGAMVD------------AQS 548
            L   K    +HA  ++ G + DL +++ +++ Y K    G + D             + 
Sbjct: 122 LLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKK 181

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLT 607
           +F+ +P  D V+W T+I+G   NG    AL +  +M  +G + PD FT + ++   +   
Sbjct: 182 VFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHV 241

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            + +G++IH   ++     D F+G SL+DMYAKC  +E +   F  +  ++ + WN+++ 
Sbjct: 242 DVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIA 301

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G  Q+G  +  L  F  M    V+P +V+F  V+ AC++   +S   +  H    + G +
Sbjct: 302 GCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQ-LHGCIVRLGFD 360

Query: 728 PEVEHYSFLVDALGRAGRTKEA 749
                 S LVD   + G  K A
Sbjct: 361 DNEFIASSLVDMYAKCGNIKMA 382



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 5/207 (2%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+  GK  H   + +    D F+ ++L+ MY++C  L  + R F  +P +D ISWNSI+A
Sbjct: 242 DVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIA 301

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
               +GE +      G   FR + +       ++ + ++  C     +     +HG  ++
Sbjct: 302 GCVQNGEFD-----RGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVR 356

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G   +EF++ +LV++Y+K G I+ A+++FD + +RD+V W  ++   A +G   +   L
Sbjct: 357 LGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSL 416

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG 274
           F ++   G+ P   +   VL   S  G
Sbjct: 417 FENMLEDGVRPCYVAFMAVLTACSHAG 443



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 109/516 (21%), Positives = 209/516 (40%), Gaps = 120/516 (23%)

Query: 121 SWNSILAAY-AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           +W+SI+  Y +HS       +   F  F S+R      +R     LLK      +   + 
Sbjct: 77  AWSSIIKCYTSHSL------LHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAH 130

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
           ++H   +++GL  D +++ AL+N Y+KF     A  +FD   +R             E+G
Sbjct: 131 SLHACTVRLGLDSDLYIANALINTYAKF---HNAGKVFDVFPKR------------GESG 175

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVL 299
                                  + CV  V   +  R                   +VV 
Sbjct: 176 -----------------------IDCVKKVFDMMPVR-------------------DVVS 193

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           WN  ++G+ Q G    A++    M ++  ++ DS T    L   A   ++N G++IHG  
Sbjct: 194 WNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYA 253

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV-CGLRT-------DQFTLASVLRA----------- 399
           +++GF   V +G+SLI+MY+K   + C LR        D  +  S++             
Sbjct: 254 VRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGL 313

Query: 400 ------------------SSSLPEGLHLS-----KQIHVHAIKNDTVADSFVSTALIDVY 436
                             SS +P   HL+     +Q+H   ++     + F++++L+D+Y
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMY 373

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + G++  A Y+F+  D  D+  W A+I G  +  ++  A+ LF +M   G R   +   
Sbjct: 374 AKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFM 433

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG------ILDMYVKCGAMVDAQSIF 550
             + AC    ++ +G     +   +  E D  ++ G      + D+  + G + +A    
Sbjct: 434 AVLTACSHAGLVDEG-----WRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFI 488

Query: 551 NDIPA--PDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +++    P    W+ +++ C  +   +LA  +  ++
Sbjct: 489 SNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKL 524



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 137/292 (46%), Gaps = 24/292 (8%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI--FNDIPAPDDV-AWTTMI 565
           +Q KQ+HA+ +K+   L    S  IL + +     +   S+  FN +P+P    AW+++I
Sbjct: 26  RQAKQLHAHIVKTKGTLH---SDNILVLSLYSNLNLLQHSLHLFNSLPSPPPPLAWSSII 82

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
                +    L+ S ++ MR   V P+   F  L+KAS+ L   +    +HA  ++L   
Sbjct: 83  KCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLD 142

Query: 626 SDPFVGISLVDMYAK---CGNIEDAYI------------LFKQMDMRNTVLWNAMLVGLA 670
           SD ++  +L++ YAK    G + D +             +F  M +R+ V WN ++ G A
Sbjct: 143 SDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFA 202

Query: 671 QHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           Q+G   E L +  +M  +G ++PDS T   +L   +    V++  E  H    + G + +
Sbjct: 203 QNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKE-IHGYAVRNGFDGD 261

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
           V   S L+D   +  R + +      +P + + S + +++  C   G+ + G
Sbjct: 262 VFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWN-SIIAGCVQNGEFDRG 312



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 50/318 (15%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSR---CGSL--VYARR----------LFDKMP 115
           L  S HA  +      D ++ N L+  Y++    G +  V+ +R          +FD MP
Sbjct: 128 LAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMP 187

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGY 174
            RD++SWN+++A +A +G        E   + R + ++        TL+ +L +      
Sbjct: 188 VRDVVSWNTVIAGFAQNGM-----YVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVD 242

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V   + +HGYA++ G   D F+  +L+++Y+K  ++  +   F  +  +D + W  ++  
Sbjct: 243 VNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAG 302

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLGKRHE 278
             +NG  +     F  + +  + P   S   V+                G I  LG    
Sbjct: 303 CVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDN 362

Query: 279 E-----QVQAYA----IKLLLYN----NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           E      V  YA    IK+  Y     +  ++V W   + G    G    A+  F NM+ 
Sbjct: 363 EFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLE 422

Query: 326 SNVQYDSVTFLVALAAVA 343
             V+   V F+  L A +
Sbjct: 423 DGVRPCYVAFMAVLTACS 440



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 19/187 (10%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG+  H  I+      + F+ ++L+ MY++CG++  AR +FD++  RD+++W +I+  
Sbjct: 344 LSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMG 403

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHG 183
            A  G        +   LF ++ E       +    +L  C     +  G+ + +     
Sbjct: 404 CAMHGHA-----LDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERD 458

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVML---RAYAEN 238
           + +  GL  + +   A+ ++  + G++ EA      M+  +    +W ++L   RA+   
Sbjct: 459 FGIAPGL--EHY--AAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSV 514

Query: 239 GFGEEVF 245
              E+V 
Sbjct: 515 ELAEKVL 521


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 203/662 (30%), Positives = 325/662 (49%), Gaps = 89/662 (13%)

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT----------------- 388
           D   +   +H   +K G+ S   VG +LIN YS  G V   RT                 
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219

Query: 389 ----------DQFTLASVLRASSSLPE---------------GLHLSKQIHVHAIKNDTV 423
                     D   L S +R +  +P                    +K +H   +K   V
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            D  V   L+ +Y + G M++A  +F      D+  W+ MI  +  +   ++A++LF  M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             +    +E T+++ +  C        G+Q+H   +K GF+LD+ VS+ ++D+Y KC  M
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A  +F ++ + ++V+W T+I G  + GE   A S++ +   + V   E TF+  + A 
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + L +++ G Q+H   IK + +    V  SL+DMYAKCG+I+ A  +F +M+  +   WN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           A++ G + HG G + L++ + MK    +P+ +TF+GVLS CS  GL+ +  E F  M   
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           +GIEP +EHY+ +V  LGR+G+  +A +LI  +P+E S  + RA+L A   Q + E  + 
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------- 832
            AE+++ + P D + YVL+SN++A A QW +V S R  MK   VKK+P            
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699

Query: 833 ------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                        LI   +E L  +    GYVPD + VLLD+++EEK++ L+ HSE+LA 
Sbjct: 700 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 759

Query: 881 AYGLISTPPS------------------------SVILSNKEPLYANRFHHLRDGMCPCA 916
           AYGL+  P S                        S++  +      NRFHH   G+C C 
Sbjct: 760 AYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCG 819

Query: 917 DN 918
           D+
Sbjct: 820 DH 821



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 251/599 (41%), Gaps = 84/599 (14%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + ++LR  I  +D +  K+ H  IL      D F TN L+  Y + G    A  LFD
Sbjct: 49  SHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFD 108

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +MP+R+ +S+ ++   YA           +   L+  L       +       LKL +S 
Sbjct: 109 EMPERNNVSFVTLAQGYA---------CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSL 159

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                   +H   +K+G   + FV  AL+N YS  G +  A+ +F+G+  +D+V+W  ++
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPD----DESVQCVLGVIS-DLGKRHEEQV------ 281
             Y ENG+ E+   L   +  +G  P+    D +++  +G+ + D  K    Q+      
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279

Query: 282 ----------QAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                     Q Y        A K+      ++VV W+  ++ + Q G  + A++ F+ M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM--- 380
             + V  +  T    L   A      LG+Q+HG  +K GF   + V N+LI++Y+K    
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399

Query: 381 -------------------GCVCG---------------------LRTDQFTLASVLRAS 400
                                + G                     +   + T +S L A 
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           +SL   + L  Q+H  AIK +      VS +LID+Y + G +  A+ +F   +  D+A+W
Sbjct: 460 ASLAS-MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           NA+I GY       +AL +   M     + + +T    +  C    ++ QG++     ++
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578

Query: 521 S-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             G E  L   + ++ +  + G +  A  +   IP  P  + W  M+S  ++   E+ A
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFA 637



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 11/290 (3%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           SL LL  ++ + F  ++ +  + + L+ +I        K  H +IL +  + D  +   L
Sbjct: 231 SLKLLSCMRMAGFMPNNYT--FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + +Y++ G +  A ++F++MP  D++ W+ ++A +  +G  N     E   LF  +RE+ 
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN-----EAVDLFIRMREAF 343

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  TL+ +L  C         E +HG  +K+G   D +VS AL+++Y+K  K+  A 
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LF  +  ++ V W  ++  Y   G G + F +F +  R+ +   + +    LG  + L 
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463

Query: 275 KRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                 QV   AIK    NN   V + N  +  Y + GD   A   F  M
Sbjct: 464 SMDLGVQVHGLAIKT---NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 11/211 (5%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y NL     +   F +      S +   + S L    S + + LG   H   + ++    
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             ++N+L+ MY++CG + +A+ +F++M   D+ SWN++++ Y+  G G      +  R+ 
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR-----QALRIL 538

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK---IGLVWDEFVSGALVNIY 204
             +++     + LT   +L  C ++G +   +      ++   I    + +    +V + 
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT--CMVRLL 596

Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            + G++ +A  L +G+  E  V++W+ ML A
Sbjct: 597 GRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 245/778 (31%), Positives = 363/778 (46%), Gaps = 144/778 (18%)

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           + W+  +SG L N      K   A+ LF+ M  RD+V W VM+                 
Sbjct: 81  ISWNAMISGCLSN-----DKFYLARQLFEKMPTRDLVSWNVMI----------------- 118

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
               SG C    +++    +   + +R                   +VV WN  LSGY Q
Sbjct: 119 ----SG-CVRYRNLRAARLLFDQMPER-------------------DVVSWNAMLSGYAQ 154

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
            G    A E F  M   N    S+++   LAA      +   +++     +S     +I 
Sbjct: 155 NGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRL----FESKADWELIS 206

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
            N ++  Y K          +  L         +PE                   D    
Sbjct: 207 WNCMMGGYVK----------RNRLVDARGIFDRMPE------------------RDEVSW 238

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             +I  Y +NG + EA+ LFE     D+ TW AM+ GY+ +    +A  +F  M      
Sbjct: 239 NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV 298

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC--VSS--GILDMYVKCGAMVD 545
                IA  V+   C  M  Q +++        FE   C  VSS   ++  Y + G +  
Sbjct: 299 SWNAIIAGYVQ---CKRM-DQAREL--------FEAMPCQNVSSWNTMITGYAQNGDIAQ 346

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A++ F+ +P  D ++W  +I+G   +G  + AL ++ +M+  G   +  TF   +   + 
Sbjct: 347 ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAE 406

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           + ALE G+Q+H  ++K    S  +VG +L+ MY KCGNI+DAYI+F+ ++ +  V WN M
Sbjct: 407 IAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTM 466

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G A+HG G+E L LFE MK  G+ PD VT +GVLSACS+TGLV +  E F+ M + YG
Sbjct: 467 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 526

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I    +HY+ ++D LGRAGR  +A  L+ +MPFE  A+   ALLGA R+ G+TE G+  A
Sbjct: 527 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 586

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------- 832
           + +  +EP +S  YVLLSN++AA+ +W DV   R  M+ + VKK P              
Sbjct: 587 KMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTF 646

Query: 833 ----------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAY 882
                     D I+  +E L  ++K+ GYV  T  VL DVEEEEK   L YHSEKLA A+
Sbjct: 647 TVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAF 706

Query: 883 GLISTP---PSSVI--LSNKEPLY------------------ANRFHHLRDGMCPCAD 917
           G+++ P   P  VI  L   E  +                  ++RFHH   G C C D
Sbjct: 707 GILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGD 764



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/610 (25%), Positives = 270/610 (44%), Gaps = 74/610 (12%)

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSG 173
           D D++ WN  +  +  +G+ ++       RLF S+  R SI++ +      ++  CLS+ 
Sbjct: 46  DADIVKWNIAITNHMRNGQCDS-----ALRLFNSMPRRSSISWNA------MISGCLSND 94

Query: 174 YVWASETVHGYALKIGLV-WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             + +  +        LV W+  +SG +     ++  +R A+ LFD M ERDVV W  ML
Sbjct: 95  KFYLARQLFEKMPTRDLVSWNVMISGCV-----RYRNLRAARLLFDQMPERDVVSWNAML 149

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
             YA+NG+ +E   +F ++     C +  S   +L      G+  +      A +L    
Sbjct: 150 SGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNGRIED------ARRLFESK 199

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
            +  ++ WN  + GY++      A   F  M     + D V++   ++  A    L   Q
Sbjct: 200 ADWELISWNCMMGGYVKRNRLVDARGIFDRM----PERDEVSWNTMISGYAQNGELLEAQ 255

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           ++     +      V    ++++ Y + G           L    R    +PE   +S  
Sbjct: 256 RL----FEESPVRDVFTWTAMVSGYVQNG----------MLDEARRVFDGMPEKNSVSWN 301

Query: 413 I----HVHAIKNDTVADSFVS---------TALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
                +V   + D   + F +           +I  Y +NG +A+A   F+     D  +
Sbjct: 302 AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSIS 361

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W A+I GY  S    +AL LF  M   GERL+  T  + +  C  +  L+ GKQ+H   +
Sbjct: 362 WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 421

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           K+G E    V + +L MY KCG + DA  +F  I   + V+W TMI+G   +G    AL 
Sbjct: 422 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 481

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVD 636
           ++  M+ +G++PD+ T   ++ A S    +++G +   ++ +   +  +S  +    ++D
Sbjct: 482 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYT--CMID 539

Query: 637 MYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEP 692
           +  + G ++DA  L K M    +   W A+L     HGN   GE+  K+  +M     EP
Sbjct: 540 LLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM-----EP 594

Query: 693 DSVTFIGVLS 702
           D+     +LS
Sbjct: 595 DNSGMYVLLS 604



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 235/514 (45%), Gaps = 74/514 (14%)

Query: 77  ARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           AR+L   Q+P+R +   N +++ Y++ G +  A+ +FD+MP ++ ISWN +LAAY  +G 
Sbjct: 130 ARLL-FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR 188

Query: 135 GNAENVTEGFRLFRSLR--ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL------ 186
                + +  RLF S    E I++            C+  GYV  +  V    +      
Sbjct: 189 -----IEDARRLFESKADWELISWN-----------CMMGGYVKRNRLVDARGIFDRMPE 232

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           +  + W+  +SG     Y++ G++ EA+ LF+    RDV  W  M+  Y +NG  +E   
Sbjct: 233 RDEVSWNTMISG-----YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARR 287

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           +F  +      P+  SV     +   +  +  +Q    A +L       NV  WN  ++G
Sbjct: 288 VFDGM------PEKNSVSWNAIIAGYVQCKRMDQ----ARELFEAMPCQNVSSWNTMITG 337

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q GD   A   F  M     Q DS+++   +A  A                +SG+   
Sbjct: 338 YAQNGDIAQARNFFDRM----PQRDSISWAAIIAGYA----------------QSGY--- 374

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
              G   ++++ +M    G R ++ T  S L   + +   L L KQ+H   +K    +  
Sbjct: 375 ---GEEALHLFVEMK-RDGERLNRSTFTSTLSTCAEIA-ALELGKQVHGRVVKAGLESGC 429

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V  AL+ +YC+ G++ +A  +FE  +  ++ +WN MI GY       +AL LF  M  +
Sbjct: 430 YVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT 489

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMV 544
           G   D++T+   + AC    ++ +G + + Y+M   + +       + ++D+  + G + 
Sbjct: 490 GILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 548

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           DAQ++  ++P  PD   W  ++     +G  +L 
Sbjct: 549 DAQNLMKNMPFEPDAATWGALLGASRIHGNTELG 582



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 56/349 (16%)

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
           T AD       I  + RNG    A  LF +       +WNAMI G + ++  + A +LF 
Sbjct: 45  TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M T     D ++    +  C     L+  + +         E D+   + +L  Y + G
Sbjct: 105 KMPTR----DLVSWNVMISGCVRYRNLRAARLL----FDQMPERDVVSWNAMLSGYAQNG 156

Query: 542 AMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
            + +A+ IF+++P  + ++W  M++  V NG  + A  ++                    
Sbjct: 157 YVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES------------------ 198

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
                       +    LI  +C         ++  Y K   + DA  +F +M  R+ V 
Sbjct: 199 ------------KADWELISWNC---------MMGGYVKRNRLVDARGIFDRMPERDEVS 237

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WN M+ G AQ+G   E  +LFE+        D  T+  ++S     G++ EA   F  M 
Sbjct: 238 WNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGMP 293

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           EK  +      ++ ++    +  R  +A EL  +MP +  +S +  + G
Sbjct: 294 EKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITG 337



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 106/232 (45%), Gaps = 15/232 (6%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F++        + S + S L      + L LGK  H R++ +      ++ N L+ MY +
Sbjct: 382 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 441

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG++  A  +F+ + +++++SWN+++A YA  G G      E   LF S++++      +
Sbjct: 442 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGK-----EALMLFESMKKTGILPDDV 496

Query: 161 TLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           T+  +L  C  +G V   +E  +      G+  +      ++++  + G++ +A+ L   
Sbjct: 497 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 556

Query: 220 MQ-ERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           M  E D   W  +L   R +     GE+   +  ++      PD+  +  +L
Sbjct: 557 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME-----PDNSGMYVLL 603


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/596 (33%), Positives = 312/596 (52%), Gaps = 47/596 (7%)

Query: 284 YAIKLLLYNNNS---NVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVAL 339
           YA   L++  N    +V LWN  LS Y        A++ F  +   S V+ D  T+ V L
Sbjct: 54  YASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVL 113

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------MG 381
            A  G   +  G++IH   LK+G    V VG+SL+NMY+K                  +G
Sbjct: 114 KACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVG 173

Query: 382 C-----VCGLRTDQFTLA-------------------SVLRASSSLPEGLHLSKQIHVHA 417
           C      C  +  +  +A                   +V+ +S +    L   K++H   
Sbjct: 174 CWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHREL 233

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           I+   + D+FV +AL+D+Y + G +  A+ +FE     +  TWNAMI GY L  +S   +
Sbjct: 234 IERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCI 293

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           EL   M+  G +   +T+ + + A    + L+ GK +H Y +++  ++D+ +   ++D Y
Sbjct: 294 ELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFY 353

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG +  A++IF  I   + V+W  MISG V  G    AL IY  M+   V PD  TF+
Sbjct: 354 FKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFS 413

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
             + A S L AL++GR++H  +I     ++  V  +L+DMYAKCG++++A  LF Q+  R
Sbjct: 414 STLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKR 473

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           + V W +M+     HG   E L+LF++M+   V  DSVTF+ VLSACS+ GLV E Y  F
Sbjct: 474 DLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYF 533

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI-LSMPFEASASMHRALLGACRVQG 776
           + M  +Y I+P +EHYS L+D LGRAGR  EA E++  S    +   +   L  AC +  
Sbjct: 534 NEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHN 593

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +   G  + + L+ ++P D S Y+LLSN++A+ N+WD+V   R +MK   +KK P 
Sbjct: 594 NFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPG 649



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 160/655 (24%), Positives = 259/655 (39%), Gaps = 96/655 (14%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF--DKM 114
            S LR   S+  L  GK  H RI +     +  L+ +L+  Y  C     A  +F  +  
Sbjct: 7   LSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDC 66

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSG 173
           P  D+  WN++L+AY      N     E  +LF  L   S       T   +LK C   G
Sbjct: 67  P-LDVSLWNALLSAYT-----NNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            V     +H + LK GL+WD FV  +L+N+Y+K  +  +A  LFD   +RDV  W  ++ 
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQ----- 282
            Y ++G  E     F  +   G  P+  +   V+   + L     GK  H E ++     
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240

Query: 283 -AYAIKLL--LYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            A+ +  L  +Y                   N + WN  ++GY   GD+   IE  + M 
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
               +   +T    + A + +  L  G+ IHG  L++     + +  SLI+ Y K G V 
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360

Query: 385 GLRT-------------------------------------------DQFTLASVLRASS 401
              T                                           D  T +S L A S
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   +++H   I +   A+  V  AL+D+Y + G + EA  LF      DL +W 
Sbjct: 421 QLA-ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWT 479

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHA 516
           +MIF Y     + +AL LF  M     R D +T    + AC    ++ +G     + +  
Sbjct: 480 SMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQ 539

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVA-WTTMISGCVDNGEE 574
           Y +K G E   C    ++D+  + G + +A  I         D+   +T+ S C+ +   
Sbjct: 540 YDIKPGIEHYSC----LIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHN-- 593

Query: 575 DLALSIYHQMRLSGVVPDE-FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           +  L I     L  V PD+  T+ +L    + +   ++ R++   + +L     P
Sbjct: 594 NFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSP 648



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 188/383 (49%), Gaps = 16/383 (4%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D +T+ +A++ C    +LKQGK +H      GF+ ++ +S  ++  Y  C     A+ +
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60

Query: 550 FNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLT 607
           F     P DV+ W  ++S   +N     AL ++ Q+  +  V PD +T+ +++KA   L 
Sbjct: 61  FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            +  GR+IH +L+K     D FVG SL++MYAKC    DA  LF +   R+   WNA++ 
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGI 726
              + G  E  LK F+ MK  G EP+SVTF  V+S+C+    +    E +  L+  +  +
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
           +  V   S LVD  G+ G  + A E+   +P   +A    A++    ++GD+ +     E
Sbjct: 241 DAFV--LSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMITGYSLKGDSRS---CIE 294

Query: 787 KLMAL--EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADL-IFAKVEGLI 843
            LM +  E    +   L S I+A++     V    G+     + ++  D+ IF  V  LI
Sbjct: 295 LLMRMNDEGTKPTLMTLTSIIYASSRS---VQLRHGKFIHGYILRNRIDVDIFIDV-SLI 350

Query: 844 KRIKEGGYVPDTDFVLLDVEEEE 866
               + GYV   + +   + + E
Sbjct: 351 DFYFKCGYVSSAETIFRTISKNE 373


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/617 (34%), Positives = 322/617 (52%), Gaps = 73/617 (11%)

Query: 348 LNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRT------------------ 388
           L  G+++HG  + +G    ++ +GN L+NMY+K G +   R                   
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 389 --DQ-----------------------FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
             DQ                       FTL S L + +SL +   L +QIH  ++K    
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASL-KWAKLGQQIHGESLKLGID 167

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS-HKALELFSH 482
            +  VS AL+ +Y   G + E   +F +    D  +WN++I     S  S  +A+  F +
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLN 227

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
              +G++L+ IT ++ + A   L   + GKQ+H  A+K     +    + ++  Y KCG 
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 543 MVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVK 601
           M   + IF+ +    DDV W +MISG + N     AL +   M  +G   D F +A ++ 
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A + +  LE+G ++HA  ++    SD  VG +LVDMY+KCG ++ A   F  M +RN+  
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           WN+M+ G A+HG GEE LKLF +MK  G   PD VTF+GVLSACS+ GL+ E +++F  M
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 467

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA-CRVQG-DT 778
            + YG+ P +EH+S + D LGRAG   +  + I  MP + +  + R +LGA CR  G   
Sbjct: 468 SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKA 527

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           E GK  AE L  LEP ++  YVLL N++AA  +W+D+  AR +MK  +VKK+        
Sbjct: 528 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 587

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                            D+I+ K++ L +++++ GYVP T F L D+E+E KE  L YHS
Sbjct: 588 KDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHS 647

Query: 876 EKLARAYGLISTPPSSV 892
           EKLA A+ L +   S++
Sbjct: 648 EKLAVAFVLAAQRSSTL 664



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 401 SSLPE-------GLHLSKQIHVHAIKNDTVADSFVS--TALIDVYCRNGSMAEAEYLFEN 451
           SS PE       GL   +++H H I    V D  V     L+++Y + GS+A+A  +F  
Sbjct: 36  SSFPEYSLAEQVGLKKGREVHGHVITTGLV-DFMVGIGNGLVNMYAKCGSIADARRVFCF 94

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  +WN+MI G   +    +A+E +  M          T+ +++ +C  L   K G
Sbjct: 95  MMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLG 154

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q+H  ++K G +L++ VS+ ++ +Y + G + + + IF+ +P  D V+W ++I G + +
Sbjct: 155 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALAS 213

Query: 572 GEEDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            E  L  A++ +     +G   +  TF+ ++ A S L+  E G+QIH   +K + + +  
Sbjct: 214 SERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEAT 273

Query: 630 VGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
              +L+  Y KCG ++    +F +M + R+ V WN+M+ G   +    + L L   M   
Sbjct: 274 TENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQT 333

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G   DS  +  VLSA +    +    E  H    +  +E +V   S LVD   + GR   
Sbjct: 334 GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDY 392

Query: 749 AGELILSMPFEASASMHRALLGACR-VQGDTETGKWVAEKLMALEPFDSSAYV 800
           A     +MP   S S +  + G  R  QG+     +   KL    P D   +V
Sbjct: 393 ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFV 445



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/534 (22%), Positives = 217/534 (40%), Gaps = 103/534 (19%)

Query: 72  GKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G+  H  ++ +  +     + N L+ MY++CGS+  ARR+F  M ++D +SWNS++    
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G        E    ++S+R         TL   L  C S  +    + +HG +LK+G+
Sbjct: 112 QNG-----CFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 166

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA--ENGFGEEVFHLF 248
             +  VS AL+ +Y++ G + E + +F  M E D V W  ++ A A  E    E V   F
Sbjct: 167 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAV-ACF 225

Query: 249 VDLHRSG-----LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV------ 297
           ++  R+G     +               +LGK+       Y I       N+ +      
Sbjct: 226 LNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKC 285

Query: 298 -------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                              V WN  +SGY+       A++    M+++  + DS  +   
Sbjct: 286 GEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 345

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           L+A A    L  G ++H  ++++   S V+VG++L++MYSK G           L   LR
Sbjct: 346 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG----------RLDYALR 395

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
             +++P                  V +S+   ++I  Y R+G   E              
Sbjct: 396 FFNTMP------------------VRNSYSWNSMISGYARHGQGEE-------------- 423

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHAY 517
                            AL+LF++M   G+   D +T    + AC    +L++G + H  
Sbjct: 424 -----------------ALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFE 465

Query: 518 AMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
           +M   + L   +   S + D+  + G +   +   + +P  P+ + W T++  C
Sbjct: 466 SMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGAC 519



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 130/324 (40%), Gaps = 46/324 (14%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H   L      +  ++N LMT+Y+  G L   R++F  MP+ D +SWNSI+ A A
Sbjct: 153 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 212

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            S     E V       R+ ++     +R+T + +L    S  +    + +HG ALK  +
Sbjct: 213 SSERSLPEAVACFLNALRAGQK----LNRITFSSVLSAVSSLSFGELGKQIHGLALKYNI 268

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFV 249
             +     AL+  Y K G++   + +F  M E RD V W  M+  Y  N    +   L  
Sbjct: 269 ADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVW 328

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQA-------------------- 283
            + ++G   D      VL   + +       + H   V+A                    
Sbjct: 329 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 388

Query: 284 ---YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVAL 339
              YA++        N   WN  +SGY + G    A++ F NM +      D VTF+  L
Sbjct: 389 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVL 448

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGF 363
           +A +           H   L+ GF
Sbjct: 449 SACS-----------HAGLLEEGF 461



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 26/243 (10%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + ++L    S + L  G   HA  + +    D  + + L+ MYS+CG L YA R F+
Sbjct: 339 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 398

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC-- 169
            MP R+  SWNS+++ YA  G+G      E  +LF +++ +  T    +T   +L  C  
Sbjct: 399 TMPVRNSYSWNSMISGYARHGQGE-----EALKLFANMKLDGQTPPDHVTFVGVLSACSH 453

Query: 170 ---LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DV 225
              L  G+         Y L   +  + F    + ++  + G++ + +   D M  + +V
Sbjct: 454 AGLLEEGFKHFESMSDSYGLAPRI--EHF--SCMADLLGRAGELDKLEDFIDKMPVKPNV 509

Query: 226 VLWKVMLRAYAE-NG----FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           ++W+ +L A    NG     G++   +   L      P++     +LG +   G R E+ 
Sbjct: 510 LIWRTVLGACCRANGRKAELGKKAAEMLFQLE-----PENAVNYVLLGNMYAAGGRWEDL 564

Query: 281 VQA 283
           V+A
Sbjct: 565 VKA 567


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 295/561 (52%), Gaps = 53/561 (9%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYC--RNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           +KQ H   ++   + +   S+ LI       +G +  A  LF      D    N MI GY
Sbjct: 27  TKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGY 86

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
             S N ++A+ L+  M   G  +D  T    + AC  L  +K G++ H   +K+GF  DL
Sbjct: 87  ARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDL 146

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RL 586
            V + ++  Y  CG+   A  +F++    D V W  MI+  ++ G  + A  +  +M +L
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKL 206

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHA---NLIKLDCSSDPFVGISLVDMYAKCGN 643
             + PDE T   LV A + L  LE+G+ +H+    L K + + D  +  +LVDMYAKCG+
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGS 266

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           I+ A  +F++M +RN   WNA++ GLA HG+GE+ + LF+ M+   + PD VTFI +L A
Sbjct: 267 IDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCA 326

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ GLV E    F  M+ K+ IEP +EHY  +VD L RA +  +A   I +MP +A++ 
Sbjct: 327 CSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSV 386

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +   LLGACR  G  +  + +  +++ LEP     YV+LSN++A  +QWD     R +MK
Sbjct: 387 LWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMK 446

Query: 824 RKNVKKDPA-----------------------DLIFAKVEGLIKRIK-EGGYVPDTDFVL 859
            K ++K P                        + I+A +E + +R+  +GG+VP T  VL
Sbjct: 447 NKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVL 506

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKE 898
            D+EEEEKE +L+ HSEKLA A GLISTP  S I                     + N+E
Sbjct: 507 FDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNRE 566

Query: 899 PLYAN--RFHHLRDGMCPCAD 917
            +  +  RFHH ++G C C D
Sbjct: 567 IVARDRSRFHHFKEGSCSCMD 587



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 52/347 (14%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA KL     N +  + N  + GY +  + + A+  +  M+   V  D+ T+   LAA A
Sbjct: 63  YARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACA 122

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY---SKMGCVC---------------- 384
               + LG++ H   LK+GF S + V N+LI  Y      GC C                
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182

Query: 385 -------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                     LR D+ T+ S++ A + L   L   K +H ++ +
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG-NLERGKFLHSYSKE 241

Query: 420 NDTV---ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            D      D  + TAL+D+Y + GS+  A  +F      ++ TWNA+I G  +  +   A
Sbjct: 242 LDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDA 301

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGIL 534
           + LF  M       D++T    + AC    ++ +G  M   AMK+ F+++  +     ++
Sbjct: 302 ISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCVV 360

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
           D+  +   + DA +   ++P   + V W T++  C   G  DLA  I
Sbjct: 361 DLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKI 407



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMY--SRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA +L +  + +   ++ L++    S  G L YAR+LF +M + D    N+++  YA
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            S     +N  E   L+  + E        T   +L  C   G V      H   LK G 
Sbjct: 88  RS-----QNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D FV  AL+  Y   G    A  +FD    RDVV W +M+ A+   G  E+ F L  +
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202

Query: 251 LHR-SGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
           + +   L PD+ ++  ++   + LG     + + +Y+ +L  +  N ++VL    +  Y 
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYA 262

Query: 309 QVGDNHGAIECFVNMIRSNV 328
           + G    A++ F  M   NV
Sbjct: 263 KCGSIDLALQVFRRMRVRNV 282



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 9/208 (4%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H  +L +    D F+ N L+  Y  CGS   A  +FD+   RD+++WN ++ A+ 
Sbjct: 129 LGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHL 188

Query: 131 HSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL--- 186
           + G    A ++ +      +LR        +T+  L+  C   G +   + +H Y+    
Sbjct: 189 NKGLSEKAFDLLDEMTKLDNLR-----PDEVTMVSLVPACAQLGNLERGKFLHSYSKELD 243

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K  +  D  +  ALV++Y+K G I  A  +F  M+ R+V  W  ++   A +G GE+   
Sbjct: 244 KFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAIS 303

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG 274
           LF  +    L PDD +   +L   S  G
Sbjct: 304 LFDQMEHDKLMPDDVTFIALLCACSHAG 331


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 245/853 (28%), Positives = 383/853 (44%), Gaps = 179/853 (20%)

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCL 170
           K  D D+++WN  ++++  +G  ++       R+F S+  R S+++ +            
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDS-----ALRVFNSMPRRSSVSYNA------------ 82

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                                    +SG L N  +KF   R+   LFD M ERD+  W V
Sbjct: 83  ------------------------MISGYLRN--AKFSLARD---LFDKMPERDLFSWNV 113

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL 290
           ML  Y  N                                  LG+ H         KL  
Sbjct: 114 MLTGYVRN--------------------------------RRLGEAH---------KLFD 132

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                +VV WN  LSGY Q G    A E F  M   N    S+++   LAA      L  
Sbjct: 133 LMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRN----SISWNGLLAAYVHNGRLKE 188

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
            +++     +S     +I  N L+  Y K          +  L    +    +P      
Sbjct: 189 ARRL----FESQSNWELISWNCLMGGYVK----------RNMLGDARQLFDRMP------ 228

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
                       V D      +I  Y + G +++A+ LF      D+ TW AM+ GY+ +
Sbjct: 229 ------------VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQN 276

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +A + F  M    E      +A  V+      M+  G+   A   +     ++   
Sbjct: 277 GMVDEARKYFDEMPVKNEISYNAMLAGYVQY---KKMVIAGELFEAMPCR-----NISSW 328

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++  Y + G +  A+ +F+ +P  D V+W  +ISG   NG  + AL+++ +M+  G  
Sbjct: 329 NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGES 388

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  TF+  +   + + ALE G+Q+H  ++K    +  FVG +L+ MY KCG+ ++A  +
Sbjct: 389 SNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDV 448

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F+ ++ ++ V WN M+ G A+HG G + L LFE MK  GV+PD +T +GVLSACS++GL+
Sbjct: 449 FEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLI 508

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
               E F+ M   Y ++P  +HY+ ++D LGRAGR +EA  L+ +MPF+  A+   ALLG
Sbjct: 509 DRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLG 568

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK- 829
           A R+ G+TE G+  AE +  +EP +S  YVLLSN++AA+ +W DV   R +M+   V+K 
Sbjct: 569 ASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKV 628

Query: 830 ----------------------DPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
                                    D I+A +E L  +++  GYV  T  VL DVEEEEK
Sbjct: 629 TGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEK 688

Query: 868 ERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANR 904
           E  L YHSEKLA A+G+++ P    I   K                           ++R
Sbjct: 689 EHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHR 748

Query: 905 FHHLRDGMCPCAD 917
           FHH  +G+C C D
Sbjct: 749 FHHFSEGICSCGD 761



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 219/497 (44%), Gaps = 71/497 (14%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N +++ Y++ G +  AR +F+KMP R+ ISWN +LAAY H+G      + E  RLF S  
Sbjct: 143 NAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGR-----LKEARRLFESQS 197

Query: 152 --ESITFTSRLTLAPLLKLCLSSGYVW------ASETVHGYALKIGLVWDEFVSGALVNI 203
             E I++            CL  GYV       A +      ++  + W+  +SG     
Sbjct: 198 NWELISWN-----------CLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISG----- 241

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y++ G + +AK LF+    RDV  W  M+  Y +NG  +E    F          D+  V
Sbjct: 242 YAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYF----------DEMPV 291

Query: 264 QCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +  +   + L    + +    A +L       N+  WN  ++GY Q G    A + F  M
Sbjct: 292 KNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMM 351

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
                Q D V++   ++  A                ++G Y   +      NM+ +M   
Sbjct: 352 ----PQRDCVSWAAIISGYA----------------QNGHYEEAL------NMFVEMK-R 384

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G  +++ T +  L   + +   L L KQ+H   +K       FV  AL+ +Y + GS  
Sbjct: 385 DGESSNRSTFSCALSTCADIA-ALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           EA  +FE  +  D+ +WN MI GY       +AL LF  M  +G + DEIT+   + AC 
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
              ++ +G + + Y+M   + +       + ++D+  + G + +A+++  ++P  P   +
Sbjct: 504 HSGLIDRGTE-YFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAAS 562

Query: 561 WTTMISGCVDNGEEDLA 577
           W  ++     +G  +L 
Sbjct: 563 WGALLGASRIHGNTELG 579



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 11/221 (4%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQI----PDRFLT--NNLMTMYSRCGSLVYARRLFDK 113
           +++ IS + +L G   + +++ + ++    P R ++  N ++T Y + G +  AR+LFD 
Sbjct: 291 VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDM 350

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP RD +SW +I++ YA +G     +  E   +F  ++     ++R T +  L  C    
Sbjct: 351 MPQRDCVSWAAIISGYAQNG-----HYEEALNMFVEMKRDGESSNRSTFSCALSTCADIA 405

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +   + VHG  +K G     FV  AL+ +Y K G   EA  +F+G++E+DVV W  M+ 
Sbjct: 406 ALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIA 465

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            YA +GFG +   LF  + ++G+ PD+ ++  VL   S  G
Sbjct: 466 GYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSG 506



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 12/259 (4%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F++      SS+ S +   L      + L LGK  H +++ +      F+ N L+ MY +
Sbjct: 379 FVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFK 438

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CGS   A  +F+ + ++D++SWN+++A YA  G G      +   LF S++++      +
Sbjct: 439 CGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGR-----QALVLFESMKKAGVKPDEI 493

Query: 161 TLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           T+  +L  C  SG +   +E  +       +         ++++  + G++ EA+ L   
Sbjct: 494 TMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRN 553

Query: 220 MQ-ERDVVLWKVML---RAYAENGFGEEVFHLFVDL--HRSGLCPDDESVQCVLGVISDL 273
           M  +     W  +L   R +     GE+   +   +    SG+     ++    G   D+
Sbjct: 554 MPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDV 613

Query: 274 GKRHEEQVQAYAIKLLLYN 292
           GK   +  +A   K+  Y+
Sbjct: 614 GKMRSKMREAGVQKVTGYS 632


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 188/553 (33%), Positives = 296/553 (53%), Gaps = 47/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K++  + + +    D +V   ++ V+ + G M +A  LF+     D+A+W  MI G++ S
Sbjct: 137 KRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDS 196

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            N  +A  LF  M          T  T ++A   L +++ G+Q+H+ A+K G   D  VS
Sbjct: 197 GNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVS 256

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMY KCG++ DA  +F+ +P    V W ++I+    +G  + ALS Y++MR SG  
Sbjct: 257 CALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAK 316

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D FT +I+++  + L +LE  +Q HA L++    +D     +LVD Y+K G +EDA+ +
Sbjct: 317 IDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHV 376

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M  +N + WNA++ G   HG GEE +++FE M   G+ P+ VTF+ VLSACSY+GL 
Sbjct: 377 FNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLS 436

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +E F+ M   + ++P   HY+ +V+ LGR G   EA ELI S PF+ + +M   LL 
Sbjct: 437 ERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLT 496

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR+  + E GK  AE L  +EP     Y++L N++ ++ +  +       +KRK ++  
Sbjct: 497 ACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRML 556

Query: 831 PA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           PA                         I+ KV  ++  I   GYV +   +L DV+EEE 
Sbjct: 557 PACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEE- 615

Query: 868 ERALYYHSEKLARAYGLISTP---PSSV------------------ILSNKEPLY--ANR 904
           +R L YHSEKLA A+GLI+TP   P  +                  +++ +E +   A+R
Sbjct: 616 QRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASR 675

Query: 905 FHHLRDGMCPCAD 917
           FHH RDG C C D
Sbjct: 676 FHHFRDGSCSCGD 688



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 169/354 (47%), Gaps = 45/354 (12%)

Query: 468 ILSNNSHKALELFSHMHTSGERLD--EITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           +L N   +A+ELF  +    +  D    T    V AC  L  ++  K++  Y + SGFE 
Sbjct: 91  VLCNRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEP 150

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           DL V + +L ++VKCG M+DA+ +F+++P  D  +W TMI G VD+G    A  ++  M 
Sbjct: 151 DLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMW 210

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
                    TF  +++AS+ L  ++ GRQIH+  +K     D FV  +L+DMY+KCG+IE
Sbjct: 211 EEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIE 270

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC- 704
           DA+ +F QM  + TV WN+++   A HG  EE L  + +M+  G + D  T   V+  C 
Sbjct: 271 DAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICA 330

Query: 705 ----------------------------------SYTGLVSEAYENFHLMREKYGIEPEV 730
                                             S  G + +A+  F+ MR K      V
Sbjct: 331 RLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRK-----NV 385

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMH---RALLGACRVQGDTETG 781
             ++ L+   G  G+ +EA E+   M  E     H    A+L AC   G +E G
Sbjct: 386 ISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERG 439



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 197/383 (51%), Gaps = 19/383 (4%)

Query: 392 TLASVLRASSSLPEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           T  +++RAS+ L  GL  + +QIH  A+K     D+FVS ALID+Y + GS+ +A  +F+
Sbjct: 220 TFTTMIRASAGL--GLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFD 277

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                    WN++I  Y L   S +AL  +  M  SG ++D  TI+  ++ C  L  L+ 
Sbjct: 278 QMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEY 337

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            KQ HA  ++ G++ D+  ++ ++D Y K G M DA  +FN +   + ++W  +I+G  +
Sbjct: 338 AKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGN 397

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +G+ + A+ ++ QM   G++P+  TF  ++ A S     E+G +I  ++ + D    P  
Sbjct: 398 HGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR-DHKVKPRA 456

Query: 631 G--ISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKA 687
                +V++  + G +++AY L +    + T  +W  +L     H N E      E++  
Sbjct: 457 MHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENL-- 514

Query: 688 HGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREK--------YGIEPEVEHYSFLVD 738
           +G+EP+ +  +I +L+  + +G + EA      ++ K          IE + + Y+FL  
Sbjct: 515 YGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCG 574

Query: 739 ALGRAGRTKEAGELILSMPFEAS 761
               + +TKE  E + +M  E S
Sbjct: 575 DKSHS-QTKEIYEKVNNMMVEIS 596



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 34/338 (10%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ L   L+  H       S + +++   +    +   K     ++NS   PD ++ N +
Sbjct: 99  AMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRV 158

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + ++ +CG ++ AR+LFD+MP++D+ SW +++  +  SG     N +E F LF  + E  
Sbjct: 159 LFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSG-----NFSEAFGLFLCMWEEF 213

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T   +++     G V     +H  ALK G+  D FVS AL+++YSK G I +A 
Sbjct: 214 NDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAH 273

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M E+  V W  ++ +YA +G+ EE    + ++  SG   D  ++  V+ + + L 
Sbjct: 274 CVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLA 333

Query: 275 K-RHEEQVQAYAIK--------------------------LLLYN--NNSNVVLWNKKLS 305
              + +Q  A  ++                            ++N     NV+ WN  ++
Sbjct: 334 SLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIA 393

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           GY   G    A+E F  M+R  +  + VTFL  L+A +
Sbjct: 394 GYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACS 431



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 115/222 (51%), Gaps = 5/222 (2%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + +++R +     + +G+  H+  L      D F++  L+ MYS+CGS+  A  +FD
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFD 277

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +MP++  + WNSI+A+YA  G        E    +  +R+S       T++ ++++C   
Sbjct: 278 QMPEKTTVGWNSIIASYALHGYSE-----EALSFYYEMRDSGAKIDHFTISIVIRICARL 332

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +  ++  H   ++ G   D   + ALV+ YSK+G++ +A  +F+ M+ ++V+ W  ++
Sbjct: 333 ASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALI 392

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             Y  +G GEE   +F  + R G+ P+  +   VL   S  G
Sbjct: 393 AGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSG 434



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 177/459 (38%), Gaps = 76/459 (16%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL       ++  W   + G++  G+   A   F+ M        S TF   + A AG
Sbjct: 171 ARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAG 230

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------CV--------------- 383
              + +G+QIH   LK G      V  +LI+MYSK G      CV               
Sbjct: 231 LGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSI 290

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G + D FT++ V+R  + L   L  +KQ H   ++  
Sbjct: 291 IASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLA-SLEYAKQAHAALVRRG 349

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D   +TAL+D Y + G M +A ++F      ++ +WNA+I GY       +A+E+F 
Sbjct: 350 YDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFE 409

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQG----------KQMHAYAMKSGFELDLCVSS 531
            M   G   + +T    + AC    + ++G           ++   AM     ++L    
Sbjct: 410 QMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGRE 469

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           G+LD         +A  +    P  P    W T+++ C     E+L L       L G+ 
Sbjct: 470 GLLD---------EAYELIRSAPFKPTTNMWATLLTAC--RMHENLELGKLAAENLYGME 518

Query: 591 PDEF-TFAILVKASSCLTALEQGRQIHANLIKLDCSSDP---FVGISLVDMYAKCGNIED 646
           P++   + +L+   +    L++   +   L +      P   ++ +        CG+   
Sbjct: 519 PEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSH 578

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           +    +  ++   V  N M+V +++HG  EE   L  D+
Sbjct: 579 S----QTKEIYEKV--NNMMVEISRHGYVEENKALLPDV 611


>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
 gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
          Length = 590

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 186/506 (36%), Positives = 285/506 (56%), Gaps = 24/506 (4%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H   I        F+ T L+ +Y R G++ +A  + +      + +W  MI GY  +
Sbjct: 30  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT 89

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +AL+LF  M  +G   +E T+AT + +C     + QGKQ+H+  +K+ FE  + V 
Sbjct: 90  ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG 149

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K   + +A+ +F+ +P  D V+ T +ISG    G ++ AL ++ Q+   G+ 
Sbjct: 150 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQ 209

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +  TF  LV A S L +L+ G+Q+HA +++ +      +  SL+DMY+KCG +  +  +
Sbjct: 210 CNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRV 269

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  R+ V WNAML+G  +HG G E + LF+D+    V+PDSVT + VLS CS+ GLV
Sbjct: 270 FDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLV 328

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F  + ++        HY  ++D LGR+GR ++A  LI +MPFE++ S+  +LLG
Sbjct: 329 DEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 388

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV  +   G+ VA+KL+ +EP ++  YV+LSNI+AAA  W DV   R  M  K V K+
Sbjct: 389 ACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKE 448

Query: 831 PADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                          I AK++ +   IK  G+VPD   VL DV++E+K
Sbjct: 449 PGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQK 508

Query: 868 ERALYYHSEKLARAYGLISTPPSSVI 893
           ER L  HSEKLA  +GL++TPP   I
Sbjct: 509 ERMLLGHSEKLAITFGLMNTPPGLTI 534



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 154/277 (55%), Gaps = 3/277 (1%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A+ AC     L +G+Q+HA  + + +   + + + ++ MYV+CGA+ DA+++ + +P   
Sbjct: 16  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+WTTMISG         AL ++ +M  +G +P+E+T A ++ + S   ++ QG+Q+H+
Sbjct: 76  VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L+K +  S  FVG SL+DMYAK  NI++A  +F  +  R+ V   A++ G AQ G  EE
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYSFL 736
            L LF  + + G++ + VTF  +++A S  GL S  Y +  H +  +  +   V   + L
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALS--GLASLDYGKQVHALILRKELPFFVALQNSL 253

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
           +D   + G+   +  +  +M   +  S +  L+G  R
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 290



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 42/333 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HAR++ +   P  FL   L+TMY RCG+L  AR + D+MP+R ++SW ++++ Y+ 
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     E   E   LF  +  +    +  TLA +L  C     ++  + VH   +K    
Sbjct: 89  T-----ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE 143

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              FV  +L+++Y+K   I+EA+ +FD + ERDVV    ++  YA+ G  EE   LF  L
Sbjct: 144 SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL 203

Query: 252 HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK---------------------LL 289
           +  G+  +  +   ++  +S L    + +QV A  ++                      L
Sbjct: 204 YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKL 263

Query: 290 LYNNN-------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           LY+          +VV WN  L GY + G  H  I  F ++    V+ DSVT L  L+  
Sbjct: 264 LYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGC 322

Query: 343 AGTDNLNLGQQIHGTTLK-------SGFYSAVI 368
           +    ++ G  I  T +K       +G Y  +I
Sbjct: 323 SHGGLVDEGLDIFDTVVKEQSALLHTGHYGCII 355



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 191/423 (45%), Gaps = 58/423 (13%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+Q+H   + + +  AV +G  L+ MY + G +                           
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G   +++TLA+VL  S S P+ ++  KQ+H   +K +  +  F
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVL-TSCSGPQSIYQGKQVHSLLVKTNFESHMF 147

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V ++L+D+Y ++ ++ EA  +F+     D+ +  A+I GY       +AL+LF  +++ G
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 207

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + + +T  T V A   L  L  GKQ+HA  ++      + + + ++DMY KCG ++ ++
Sbjct: 208 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSR 267

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+++     V+W  M+ G   +G     +S++  +    V PD  T   ++   S   
Sbjct: 268 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGG 326

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
            +++G  I   ++K + S+    G    ++D+  + G +E A  L + M   +T  +W +
Sbjct: 327 LVDEGLDIFDTVVK-EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 385

Query: 665 MLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLSAC-SYTGLVSEAYENFHLM 720
           +L     H N   GE   +   +M     EP++     +LS   +  G+  + ++   LM
Sbjct: 386 LLGACRVHANVHVGELVAQKLLEM-----EPENAGNYVILSNIYAAAGMWKDVFKVRKLM 440

Query: 721 REK 723
            EK
Sbjct: 441 LEK 443



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 47/318 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV W   +SGY Q   +  A++ F+ M+R+    +  T    L + +G  ++  G+Q+H
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK-------------------MGCVC------------ 384
              +K+ F S + VG+SL++MY+K                   + C              
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ +  T  +++ A S L   L   KQ+H   ++ +      +  +L
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLA-SLDYGKQVHALILRKELPFFVALQNSL 253

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+Y + G +  +  +F+N     + +WNAM+ GY      H+ + LF  +H    + D 
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDS 312

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG-ILDMYVKCGAMVDAQSIFN 551
           +T+   +  C    ++ +G  +    +K    L      G I+D+  + G +  A ++  
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIE 372

Query: 552 DIPAPDDVA-WTTMISGC 568
           ++P     + W +++  C
Sbjct: 373 NMPFESTPSIWGSLLGAC 390


>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 709

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/539 (35%), Positives = 290/539 (53%), Gaps = 28/539 (5%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           L N  L+ Y++  D   A++ F  M   NV   S      +     +D L+L   +H   
Sbjct: 42  LQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMH--- 98

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
            + GF                      ++ ++FT  S L+A S L E +  + QI+   +
Sbjct: 99  -REGF----------------------VKPNEFTFVSALQACS-LSENVTQAYQIYSLVV 134

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           ++    + F+  A +    RNG + EA  +FE     D  TWN M+ GY L  +S +   
Sbjct: 135 RSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGY-LEFSSEQIPV 193

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            + +M+  G + DE T A+A+     +  LK G Q+HA  ++SG+  D+CV + ++DMY+
Sbjct: 194 FWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYL 253

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           K   + +    F++IP  D  +WT M  GC+  GE  +AL++  +M+  GV P++FT A 
Sbjct: 254 KNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLAT 313

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
            + A +CL ++E+G+Q H   IKL    D  V  +L+DMYAKCG ++ A+ +F+  + R+
Sbjct: 314 ALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRS 373

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V W  M++  AQ+G   E L++F++MK   VEP+ +TFI VL ACS  G V E ++   
Sbjct: 374 VVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLS 433

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M + YGI P  +HY  +V  LGRAG  KEA ELIL MPF     + + LL AC++ GD 
Sbjct: 434 SMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDV 493

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFA 837
           ETGK  AE  +  +  D S+YVLLSN+ A  + WD V S R  M+ +NVKK P   I A
Sbjct: 494 ETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVPGSRIAA 552



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 3/333 (0%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH + IK       F+   L+++Y +   +  A  LF+     ++ +W++++ G + +  
Sbjct: 27  IHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGG 86

Query: 473 SHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           +  AL LFS MH  G  + +E T  +A++AC     + Q  Q+++  ++SG E ++ + +
Sbjct: 87  ASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLN 146

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
             L   V+ G + +A  IF   P  D V W TM+ G ++   E + +  +  M   GV P
Sbjct: 147 AFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIPV-FWRYMNREGVKP 205

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           DEFTFA  +   + +++L+ G Q+HA L++     D  VG SLVDMY K   +E+ +  F
Sbjct: 206 DEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAF 265

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            ++  ++   W  M  G  Q G     L +   MK  GV+P+  T    L+AC+    + 
Sbjct: 266 DEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASME 325

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           E  + FH +R K G + +V   + L+D   + G
Sbjct: 326 EG-KQFHGLRIKLGSDVDVCVDNALLDMYAKCG 357



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 38/359 (10%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++LR     S+ L G + HA  +        FL N+L+ MY +C  L  A +LFD+MP
Sbjct: 8   YINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMP 67

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGY 174
           +R+++SW+S++    H+G       ++   LF  + RE     +  T    L+ C  S  
Sbjct: 68  ERNVVSWSSVMTGCVHNG-----GASDALSLFSCMHREGFVKPNEFTFVSALQACSLSEN 122

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           V  +  ++   ++ GL  + F+  A +    + GK+ EA  +F+    RD V W  M+  
Sbjct: 123 VTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGG 182

Query: 235 YAENGFGEEVFHLFVD-LHRSGLCPDD---ESVQCVLGVISDLG---KRHEEQVQA-YAI 286
           Y E  F  E   +F   ++R G+ PD+    S    L  IS L    + H + V++ Y  
Sbjct: 183 YLE--FSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGD 240

Query: 287 KLLLYNNNSNVVLWNKKLS----------------------GYLQVGDNHGAIECFVNMI 324
            + + N+  ++ L N+KL                       G LQ G+   A+     M 
Sbjct: 241 DICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMK 300

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           +  V+ +  T   AL A A   ++  G+Q HG  +K G    V V N+L++MY+K GC+
Sbjct: 301 KMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCM 359



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 115/218 (52%), Gaps = 3/218 (1%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           +G  +HAY +K      L + + +L+MY+KC  +  A  +F+++P  + V+W+++++GCV
Sbjct: 23  KGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCV 82

Query: 570 DNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
            NG    ALS++  M   G V P+EFTF   ++A S    + Q  QI++ +++     + 
Sbjct: 83  HNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNV 142

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           F+  + +    + G + +A  +F+   +R+TV WN M+ G  +  + E+    +  M   
Sbjct: 143 FLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEF-SSEQIPVFWRYMNRE 201

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYG 725
           GV+PD  TF   L+  +    +    + +  L+R  YG
Sbjct: 202 GVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYG 239



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 5/217 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S L    + S L +G   HA+++ S    D  + N+L+ MY +   L    + FD++P +
Sbjct: 212 SALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHK 271

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ SW  +       GE           +   +++     ++ TLA  L  C     +  
Sbjct: 272 DVCSWTQMADGCLQWGEPRM-----ALAVIAKMKKMGVKPNKFTLATALNACACLASMEE 326

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            +  HG  +K+G   D  V  AL+++Y+K G +  A  +F     R VV W  M+ A A+
Sbjct: 327 GKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQ 386

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           NG   E   +F ++  + + P+  +  CVL   S  G
Sbjct: 387 NGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGG 423


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 200/582 (34%), Positives = 303/582 (52%), Gaps = 96/582 (16%)

Query: 387 RTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           R +++T  +VL+A S    + EG+    Q+H H +K+    D  + ++ I +Y   G + 
Sbjct: 135 RPNKYTYPAVLKACSDSGVVAEGV----QVHAHLVKHGLGGDGHILSSAIRMYASFGRLV 190

Query: 444 EAEYLFENKDG-FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           EA  + ++K G  D   WNAMI GY+       A ELF  M       D   I+T     
Sbjct: 191 EARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP------DRSMISTW---- 240

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
                          AM SGF               +CG +  A+  F+++   D+++W+
Sbjct: 241 --------------NAMISGFS--------------RCGMVEVAREFFDEMKERDEISWS 272

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            MI G +  G    AL I+HQM+   + P +F    ++ A + L AL+QGR IH    + 
Sbjct: 273 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN 332

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               D  +G SLVDMYAKCG I+ A+ +F++M  +    WNAM+ GLA HG  E+ + LF
Sbjct: 333 SIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF 392

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             M    + P+ +TF+GVL+AC++ GLV +    F+ MR++YG+EP++EHY  +VD LGR
Sbjct: 393 SKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGR 449

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG   EA +++ S+P E + ++  ALLGACR  G+ E G+ V + L+ LEP +S  Y LL
Sbjct: 450 AGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLL 509

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA----DL--------------------IFAK 838
           SNI+A A +W++V   R  MK + +K  P     DL                    I+  
Sbjct: 510 SNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQM 569

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----- 893
           ++ + +R++  GY PD   VL D++EEEKE A++ HSEKLA  +GLI+T P + I     
Sbjct: 570 LDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKN 629

Query: 894 ----------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                           + N+E +  +  R+HH R+G C C D
Sbjct: 630 LRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKD 671



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/451 (23%), Positives = 202/451 (44%), Gaps = 21/451 (4%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           ++++  +    NV LWN  +   ++  +   AI  +  M+ ++ + +  T+   L A + 
Sbjct: 91  SLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSD 150

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---DQFTLASVLRASS 401
           +  +  G Q+H   +K G      + +S I MY+  G +   R    D+      +  ++
Sbjct: 151 SGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 210

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            +   L   +      +       S +ST  A+I  + R G +  A   F+     D  +
Sbjct: 211 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 270

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+AMI GYI      +ALE+F  M     R  +  + + + AC  L  L QG+ +H YA 
Sbjct: 271 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 330

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           ++  +LD  + + ++DMY KCG +  A  +F  +   +  +W  MI G   +G  + A+ 
Sbjct: 331 RNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 390

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDM 637
           ++ +M    + P+E TF  ++ A +    +++G  I  N ++ +   +P +     +VD+
Sbjct: 391 LFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIF-NSMRKEYGVEPQIEHYGCIVDL 446

Query: 638 YAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPD 693
             + G + +A  +   +    T  +W A+L    +HGN   GE   K+  ++     EP 
Sbjct: 447 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL-----EPQ 501

Query: 694 SVTFIGVLSAC-SYTGLVSEAYENFHLMREK 723
           +     +LS   +  G   E  E   LM+E+
Sbjct: 502 NSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 532



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 23/293 (7%)

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG-----AMVDAQSIFNDIPAPDD 558
           C   L   KQ HA  +++G   D  ++  ++  Y         +   +  +F+ +  P+ 
Sbjct: 44  CTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNV 103

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
             W  MI  C++N E   A+ +Y++M ++   P+++T+  ++KA S    + +G Q+HA+
Sbjct: 104 FLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAH 163

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGN-IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           L+K     D  +  S + MYA  G  +E   IL  +    + V WNAM+ G  + G  E 
Sbjct: 164 LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEA 223

Query: 678 TLKLFEDMKAHGVEPDS---VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
             +LFE M      PD     T+  ++S  S  G+V  A E F  M+E+  I      +S
Sbjct: 224 ARELFEGM------PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS-----WS 272

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRAL---LGACRVQGDTETGKWV 784
            ++D   + G   EA E+   M  E        L   L AC   G  + G+W+
Sbjct: 273 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWI 325



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 115/557 (20%), Positives = 208/557 (37%), Gaps = 99/557 (17%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAI-------STSDLLLGKSTHARILNSSQIPDRFLTN 92
           P+    H      S++   +   AI        T+ L   K  HA IL +  + D ++  
Sbjct: 12  PYHHHHHLIPKGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAG 71

Query: 93  NLMTMYSRCGSLVY-----ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
           +L+  Y+   +  Y     + R+FD +   ++  WN ++     + E       +   L+
Sbjct: 72  SLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNE-----PFKAILLY 126

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +  + +  ++ T   +LK C  SG V     VH + +K GL  D  +  + + +Y+ F
Sbjct: 127 YEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASF 186

Query: 208 GKIREAKFLFDGM-QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           G++ EA+ + D    E D V W  M+  Y   G  E    LF  +      PD   +   
Sbjct: 187 GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM------PDRSMISTW 240

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
             +IS   +    +V   A +        + + W+  + GY+Q G    A+E F  M + 
Sbjct: 241 NAMISGFSRCGMVEV---AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKE 297

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            ++         L+A A    L+ G+ IH    ++      ++G SL++MY+K G +  L
Sbjct: 298 KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI-DL 356

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             + F   S    SS                             A+I     +G   +A 
Sbjct: 357 AWEVFEKMSNKEVSS---------------------------WNAMIGGLAMHGRAEDAI 389

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATAVKA 501
            LF   D +     N + F  +L+  +H     K L +F+ M        E  +   ++ 
Sbjct: 390 DLFSKMDIYP----NEITFVGVLNACAHGGLVQKGLTIFNSMR------KEYGVEPQIEH 439

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVA 560
            GC                            I+D+  + G + +A+ + + IP  P    
Sbjct: 440 YGC----------------------------IVDLLGRAGLLTEAEKVVSSIPTEPTPAV 471

Query: 561 WTTMISGCVDNGEEDLA 577
           W  ++  C  +G  +L 
Sbjct: 472 WGALLGACRKHGNVELG 488



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 6/191 (3%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG-----NIEDAYILFKQMDMR 657
           + C T+L   +Q HA +++     D ++  SLV  YA        + E +  +F  +   
Sbjct: 42  TQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 101

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N  LWN M+    ++    + + L+ +M      P+  T+  VL ACS +G+V+E  +  
Sbjct: 102 NVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQ-V 160

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           H    K+G+  +    S  +      GR  EA  ++     E  A    A++      G+
Sbjct: 161 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGE 220

Query: 778 TETGKWVAEKL 788
            E  + + E +
Sbjct: 221 VEAARELFEGM 231



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 13/199 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    +   L  G+  H     +S   D  L  +L+ MY++CG +  A  +F+KM ++
Sbjct: 308 SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK 367

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ SWN+++   A    G AE+  + F         ITF        +L  C   G V  
Sbjct: 368 EVSSWNAMIGGLAM--HGRAEDAIDLFSKMDIYPNEITFVG------VLNACAHGGLVQK 419

Query: 178 SETVHGYALKIGLVWDEFVS-GALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRAY 235
             T+     K   V  +    G +V++  + G + EA+ +   +  E    +W  +L A 
Sbjct: 420 GLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGAC 479

Query: 236 AENG---FGEEVFHLFVDL 251
            ++G    GE V  + ++L
Sbjct: 480 RKHGNVELGERVGKILLEL 498


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 204/587 (34%), Positives = 312/587 (53%), Gaps = 61/587 (10%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMA 443
           L  D FTL+ ++ A      G+++     +HA+   T  DS+VS   ALI  Y +NG + 
Sbjct: 136 LDMDGFTLSGIITAC-----GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 444 EAEYLFE-NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           EA  +F    +  D  +WN+M+  Y+      KALEL+  M   G  +D  T+A+ + A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA-MVDAQSIFNDIPAPDDVAW 561
             +  L  G Q HA  +KSG+  +  V SG++D+Y KCG  M+D + +F++I  PD V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 562 TTMISG-CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
            TMISG  +     D AL  + Q++  G  PD+ +   ++ A S +++  QGRQ+H   +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 621 KLDCSSDPF-VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           KLD  S+   V  +L+ MY+KCGN+ DA  LF  M   NTV +N+M+ G AQHG G ++L
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF+ M      P ++TFI VL+AC++TG V +    F++M++K+GIEPE  H+S ++D 
Sbjct: 431 HLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDL 490

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGRAG+  EA  LI ++PF+       ALLGACR+ G+ E     A +L+ L+P +++ Y
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPY 550

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           V+L+NI++   +  D  S R  M+ + VKK P                          I 
Sbjct: 551 VMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQ 610

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLD----VEEEEKERALYYHSEKLARAYGLISTPPSSV 892
             +E ++++IK+ GY P+     +     V + E+E  L +HSEKLA ++GL+ST     
Sbjct: 611 EYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEP 670

Query: 893 ILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
           IL  K                           ++RFH  +DG C C 
Sbjct: 671 ILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCG 717



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 272/620 (43%), Gaps = 99/620 (15%)

Query: 156 FTSRL-TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
           F+S L +    LK C++   +   +++H   +K  +    ++S   + +YSK  ++  A+
Sbjct: 4   FSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAAR 63

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD   + +V  +  ++ AYA+  + E    LF ++      P  +SV           
Sbjct: 64  RVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEM------PQPDSVS---------- 107

Query: 275 KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                                    +N  ++ Y + GD   A + F+ M  + +  D  T
Sbjct: 108 -------------------------YNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFT 142

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------- 381
            L  +    G  N+ L +Q+H  ++ +G  S V VGN+LI  YSK G             
Sbjct: 143 -LSGIITACGI-NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLS 200

Query: 382 -------------------------------CVCGLRTDQFTLASVLRASSSLPEGLHLS 410
                                           V GL  D FTLASVL A +++ + L   
Sbjct: 201 EDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLG-G 259

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCR-NGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            Q H   IK+    +S V + LID+Y +  G M +   +F+     DL  WN MI GY L
Sbjct: 260 LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSL 319

Query: 470 SNN-SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-L 527
             + S +ALE F  +   G R D+ ++   + AC  +    QG+Q+H  A+K     + +
Sbjct: 320 YEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRI 379

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V++ ++ MY KCG + DA+++F+ +P  + V++ +MI+G   +G    +L ++ +M   
Sbjct: 380 SVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEM 439

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIE 645
              P   TF  ++ A +    +E G+ I+ N++K     +P  G    ++D+  + G + 
Sbjct: 440 DFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLS 498

Query: 646 DAYILFKQMDMRNTVL-WNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSA 703
           +A  L + +        W+A+L     HGN E  +K    +    ++P ++  ++ + + 
Sbjct: 499 EAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQ--LDPLNAAPYVMLANI 556

Query: 704 CSYTGLVSEAYENFHLMREK 723
            S  G + +A     LMR++
Sbjct: 557 YSDNGRLQDAASVRKLMRDR 576



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 249/602 (41%), Gaps = 140/602 (23%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           HFSS   S + F  L+  I+  DL  GKS HA  + S      +L+N+ + +YS+C  L 
Sbjct: 3   HFSSLLHSFRQF--LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLS 60

Query: 106 YARR-------------------------------LFDKMPDRDLISWNSILAAYAHSGE 134
            ARR                               LFD+MP  D +S+N+++AAYA  G+
Sbjct: 61  AARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-LSSGYVWASETVHGYALKIGLVWD 193
                    F+LF  +RE+       TL+ ++  C ++ G +     +H  ++  GL  D
Sbjct: 121 -----TQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGL--D 170

Query: 194 EFVS--GALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            +VS   AL+  YSK G ++EA+ +F  + E RD V W  M+ AY ++  G +   L+++
Sbjct: 171 SYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLE 230

Query: 251 LHRSGLCPDDESVQCVLGVISDL----------------GKRHEEQVQAYAI-------- 286
           +   GL  D  ++  VL   +++                G      V +  I        
Sbjct: 231 MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGG 290

Query: 287 ------KLLLYNNNSNVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDSVTFLVAL 339
                 K+    +N ++VLWN  +SGY    D +  A+ECF  +     + D  + +  +
Sbjct: 291 CMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVI 350

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           +A +   + + G+Q+HG  LK    S  I V N+LI MYSK    CG   D  TL     
Sbjct: 351 SACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSK----CGNLRDAKTLF---- 402

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
              ++PE              ++TV                                   
Sbjct: 403 --DTMPE--------------HNTV----------------------------------- 411

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-QMHAY 517
           ++N+MI GY       ++L LF  M         IT  + + AC     ++ GK   +  
Sbjct: 412 SYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMM 471

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDL 576
             K G E +    S ++D+  + G + +A+ +   IP  P    W+ ++  C  +G  +L
Sbjct: 472 KQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVEL 531

Query: 577 AL 578
           A+
Sbjct: 532 AI 533



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 172/348 (49%), Gaps = 7/348 (2%)

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F    LI  Y +   +  A  LF+     D  ++N +I  Y    ++  A +LF  M  +
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
              +D  T++  + ACG  + L   +Q+HA ++ +G +  + V + ++  Y K G + +A
Sbjct: 135 FLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192

Query: 547 QSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           + IF+ +    D+V+W +M+   + + E   AL +Y +M + G++ D FT A ++ A + 
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN-IEDAYILFKQMDMRNTVLWNA 664
           +  L  G Q HA LIK     +  VG  L+D+Y+KCG  + D   +F ++   + VLWN 
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312

Query: 665 MLVGLAQHGN-GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           M+ G + + +  +E L+ F  ++  G  PD  + + V+SACS     S+  +  H +  K
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQ-VHGLALK 371

Query: 724 YGIEP-EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
             I    +   + L+    + G  ++A  L  +MP   + S +  + G
Sbjct: 372 LDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAG 419


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 187/577 (32%), Positives = 307/577 (53%), Gaps = 52/577 (9%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID--VYCRNGSMAEAE 446
           DQ +L + ++  + + +     K I  H ++ +   D+F+++ LI+      +G +A A 
Sbjct: 6   DQGSLVAAIKRCTRVGD----LKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAH 61

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F      +L  WN +I GY +S++   A+ L+  M   G   +  T    +KAC  LL
Sbjct: 62  RIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLL 121

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            L +G+++H+  +K G + +  + +G++ +Y  CG M  A  +F+++P PD  +W+TM+S
Sbjct: 122 RLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVS 181

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   NG+   AL ++ +M+   V  D FT A +V     L AL+ G+ +H+ + K     
Sbjct: 182 GYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKI 241

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D  +G +LV MY+KCG++++A  +F+ M  R+   W+ M+ G A HG+GE+ L+LF+ MK
Sbjct: 242 DVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMK 301

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
                P+ VTF  VLSACS++GLV + ++ F  M  +Y I P+++HY  +VD   RAG  
Sbjct: 302 RSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMV 361

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
             A + I +MP E +  + R LLGAC+  G  + G+ ++ K++ L+P     YVL+SN++
Sbjct: 362 GHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVY 421

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLI 843
           A+  +W  V   R  MK K  KK                          + I+  +  + 
Sbjct: 422 ASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMA 481

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------- 893
           +++K+ G+V  T  VL D++EEEKE AL  HSE+LA AYGL+ TP  S I          
Sbjct: 482 RKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCR 541

Query: 894 -----------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                      + N+E +  +  RFHH R+  C C D
Sbjct: 542 DCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCND 578



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 5/225 (2%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S +S  +  +L+       L  G+  H++I+      +  L N L+ +Y+ CG + YA  
Sbjct: 104 SPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACV 163

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +FD+MP+ D  SW+++++ YA +G+       E  +LFR ++     +   TLA ++ +C
Sbjct: 164 MFDEMPEPDSASWSTMVSGYAQNGQA-----VEALKLFREMQAENVSSDAFTLASVVGVC 218

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
              G +   + VH Y  K G+  D  +  ALV +YSK G +  A  +F GM ERDV  W 
Sbjct: 219 GDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWS 278

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            M+  YA +G GE+   LF  + RS   P+  +   VL   S  G
Sbjct: 279 TMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSG 323



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 154/368 (41%), Gaps = 49/368 (13%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           AYA ++    ++ N+ +WN  + GY        AI  + +M    +  +S TF   L A 
Sbjct: 58  AYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC 117

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---C--------------- 384
                L  GQ++H   +K G      + N LI +Y+  GC+   C               
Sbjct: 118 CKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWS 177

Query: 385 -------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                     + +D FTLASV+     L   L L K +H +  K
Sbjct: 178 TMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLG-ALDLGKWVHSYMDK 236

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                D  + TAL+ +Y + GS+  A  +F+     D+  W+ MI GY +  +  KAL+L
Sbjct: 237 EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQL 296

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMY 537
           F  M  S    + +T  + + AC    ++++G Q+    M + +++   +     ++D++
Sbjct: 297 FDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFE-TMWTEYKITPQIKHYGCMVDLF 355

Query: 538 VKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPDEFT 595
            + G +  A      +P  P+ V W T++  C  +G +DL   I  + ++L    P+ + 
Sbjct: 356 CRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYV 415

Query: 596 FAILVKAS 603
               V AS
Sbjct: 416 LVSNVYAS 423



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/477 (21%), Positives = 194/477 (40%), Gaps = 69/477 (14%)

Query: 73  KSTHARILNSSQIPDRFLTNNLM--TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K+  A ++ ++   D FLT+ L+  +  +  G + YA R+F      +L  WN+I+  Y+
Sbjct: 24  KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYS 83

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            S     ++      L+R +       +  T   +LK C     +   + +H   +K+GL
Sbjct: 84  IS-----DSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGL 138

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            ++  +   L+ +Y+  G +  A  +FD M E D   W  M+  YA+NG   E   LF +
Sbjct: 139 DFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFRE 198

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAY------------------------- 284
           +    +  D  ++  V+GV  DLG     + V +Y                         
Sbjct: 199 MQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGS 258

Query: 285 ---AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
              A+K+       +V  W+  ++GY   G    A++ F  M RS    + VTF   L+A
Sbjct: 259 LDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSA 318

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVG-NSLINMYSKMGCVCGLRTDQF--------- 391
            + +  +  G QI  T       +  I     +++++ + G V      +F         
Sbjct: 319 CSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG--HAHKFIQTMPIEPN 376

Query: 392 -----TLASVLRASSSLPEGLHLSKQIHVHAIKND-TVADSFVSTALIDVYC---RNGSM 442
                TL    +       G H+S++I    +K D +  +++V  +  +VY    R  S+
Sbjct: 377 VVLWRTLLGACKTHGYKDLGEHISRKI----LKLDPSSPENYVLVS--NVYASLGRWSSV 430

Query: 443 AEAEYLFENKDGFDLATW-----NAMIFGYILSNNSHKALE-LFSHMHTSGERLDEI 493
            +   L ++K       W     N M+  +I+ + SH   E ++  +H    +L ++
Sbjct: 431 CQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQV 487



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 19/182 (10%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H+ +       D  L   L+ MYS+CGSL  A ++F  M +RD+ +W++++A 
Sbjct: 224 LDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAG 283

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YA  G G      +  +LF +++ S T  + +T   +L  C  SG V     +       
Sbjct: 284 YAIHGHGE-----KALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQI------F 332

Query: 189 GLVWDEFV-------SGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVMLRAYAENGF 240
             +W E+         G +V+++ + G +  A KF+     E +VVLW+ +L A   +G+
Sbjct: 333 ETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGY 392

Query: 241 GE 242
            +
Sbjct: 393 KD 394


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 181/498 (36%), Positives = 287/498 (57%), Gaps = 16/498 (3%)

Query: 363 FYSAVIVGNSLINMYSKMGCVC-------GLRTDQFTLASVLRA---SSSLPEGLHLSKQ 412
            Y+A+I G +  N  S  G V        G+  D +T+  VL+A   S ++ EG    ++
Sbjct: 91  LYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG----EE 146

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H  AIK    +D +VS  L+ +Y     +  A  +F+     DL +W  MI GY+    
Sbjct: 147 VHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGF 206

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSS 531
           + + + LF  M     + D +T+   + +C  L  L+ G+++H Y ++ S   LD+ V +
Sbjct: 207 AREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGN 266

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY+KCG    A+ +F ++P  + V+W +MISG    G+   +L ++ +M+  GV P
Sbjct: 267 ALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKP 326

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D+ T   ++ + + L  LE G+ +HA L +    +D F+G +LVDMYAKCG+I+ A  +F
Sbjct: 327 DDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVF 386

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           + M+ ++   + AM+VGLA HG G + L LF +M   G+EPD VTF+GVL+ACS+ GLV 
Sbjct: 387 QAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVE 446

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  + F  M   Y + P++EHY  +VD LGRAG   EA E I +MP E  A +  ALLGA
Sbjct: 447 EGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGA 506

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           C++ G  E G+ V +K+  +EP    AYVL+SNI+++AN+W D    R  MK +N++K P
Sbjct: 507 CKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTP 566

Query: 832 ADLIFAKVEGLIKRIKEG 849
                 +++G+I   ++G
Sbjct: 567 G-CSSIELDGVIHEFQKG 583



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 48/350 (13%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV---------YARRLFDKMPDRDLISWN 123
           K  HA I+ +   PD  LT     + +R  +L          YA  L  ++   +L  +N
Sbjct: 39  KQIHASIIKTMPSPDAQLT-----ISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYN 93

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           +I+   A S   N +++ EG  +++ +          T+  +LK C  S  V   E VHG
Sbjct: 94  AIIRGLATS---NNDSI-EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHG 149

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
            A+K+GL  D +VS  L+ +Y+    IR A+ +FD   +RD+V W  M++ Y + GF  E
Sbjct: 150 QAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFARE 209

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQAYAIKLLLYNNNS-- 295
              LF ++    L  D  ++  VL   + LG      K H   ++   + L ++  N+  
Sbjct: 210 GVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALV 269

Query: 296 ----------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                 NVV WN  +SG  Q G    ++  F  M R  V+ D V
Sbjct: 270 DMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDV 329

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           T +  L + A    L LG+ +H    ++   +   +GN+L++MY+K G +
Sbjct: 330 TLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSI 379



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 6/217 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +L       DL LG+  H  I+ +S +  D F+ N L+ MY +CG   +AR++F +MP +
Sbjct: 232 VLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK 291

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SWNS+++  A  G+       E   +FR ++        +TL  +L  C + G +  
Sbjct: 292 NVVSWNSMISGLAQKGQ-----FKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLEL 346

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH Y  +  +  D F+  ALV++Y+K G I +A ++F  M  +DV  +  M+   A 
Sbjct: 347 GKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAM 406

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G G +   LF ++ + G+ PD+ +   VL   S +G
Sbjct: 407 HGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVG 443



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 9/145 (6%)

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--LVDMYAKCGNIEDAY 648
           P + +F   ++    +  L   +QIHA++IK   S D  + IS  L  + A+   I+  Y
Sbjct: 20  PHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRY 76

Query: 649 IL--FKQMDMRNTVLWNAMLVGLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            L    Q+   N  L+NA++ GLA   N   E L +++ M + G+ PD+ T   VL AC+
Sbjct: 77  ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 136

Query: 706 YTGLVSEAYENFHLMREKYGIEPEV 730
            +  V E  E  H    K G+  +V
Sbjct: 137 ESRAVREG-EEVHGQAIKMGLASDV 160



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 16/220 (7%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           F  SL  F +              ++L    +   L LGK  HA +  +    D F+ N 
Sbjct: 309 FKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNA 368

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY++CGS+  A  +F  M  +D+ S+ +++   A  G+G      +   LF  + + 
Sbjct: 369 LVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGG-----KALDLFSEMPKM 423

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS----GALVNIYSKFGK 209
                 +T   +L  C   G V   E    Y   +  +++        G +V++  + G 
Sbjct: 424 GIEPDEVTFVGVLTACSHVGLV---EEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGL 480

Query: 210 IREAKFLFDGMQ-ERDVVLWKVMLRAYAENG---FGEEVF 245
           I EA+     M  E D  +   +L A   +G    GE V 
Sbjct: 481 INEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVM 520


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 254/912 (27%), Positives = 424/912 (46%), Gaps = 116/912 (12%)

Query: 74   STHARILNSSQIPDRF----LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            +THAR++   ++ DRF    ++  L+T Y   G   YA  +F     R+ +SW   L   
Sbjct: 442  TTHARMM---KLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKA 498

Query: 130  AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
               G    + + E  RL     + + F   + LA + ++C    Y +   T+HG  +K G
Sbjct: 499  EDFGVEKYKVLEEFVRL---QNKGVNF-DEVVLAMVFRICAVLMYRFLGFTIHGGLIKRG 554

Query: 190  L-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            L   D  V  AL+  Y +   +  A  +FD M +RD + W  ++    ++G  E+   LF
Sbjct: 555  LDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLF 614

Query: 249  VDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
              +  SG    D ++  +L V S+  G     Q+  Y ++L      SNV + N  +  Y
Sbjct: 615  RVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGF---ESNVSMCNSLIVMY 671

Query: 308  LQVGDNHGAIECFVNMIRSNVQ-YDS-VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
             + G    + + F +M+  N+  ++S V+    L  V   D + L  ++    LK     
Sbjct: 672  SRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYV--DDAMGLLDEMETCGLKPD--- 726

Query: 366  AVIVGNSLINMYS------------KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
             ++  NSL++ Y+            K   + GL+ +  +++S+L+A    P  + L K I
Sbjct: 727  -IVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYE-PGLVKLGKAI 784

Query: 414  HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
            H + I+N    D +V T LID+Y + G +  A  +F+  D  ++  WN++I G   +   
Sbjct: 785  HGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLL 844

Query: 474  HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             +A  L S M   G + + +T  + V         ++   +     K+G E         
Sbjct: 845  KEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVE--------- 895

Query: 534  LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
                                  P+ V+WT ++SGC  NG     L I+ +M+  GV P+ 
Sbjct: 896  ----------------------PNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNS 933

Query: 594  FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
             T + L++   CL+ L  G+++H+  +K + + D  V  +LVDMYAK G+++ A  +F  
Sbjct: 934  ATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWG 993

Query: 654  MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
            +  +    WN M++G A    GEE + +F  M   G+EPD++TF  VLS C  +GLV E 
Sbjct: 994  IKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREG 1053

Query: 714  YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            ++ F LMR  YG+ P +EH S +V+ LGR+G   EA + I +MP +  A++  A L +C+
Sbjct: 1054 WKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCK 1113

Query: 774  VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK----- 828
            +  D E  +   ++L  LEP +S+ Y+++ N+++  N+W DV   R  M    V+     
Sbjct: 1114 IHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLW 1173

Query: 829  -------------------KDPADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                                D  ++ F ++  L+  +K+ GY+PDT  +  +V E EKE+
Sbjct: 1174 SWIQIDQTVHIFYAEGKAHPDEGEIYF-ELYKLVSEMKKSGYMPDTRCIHQNVSESEKEK 1232

Query: 870  ALYYHSEKLARAYGLISTP---PSSV------------------ILSNKEPLYAN--RFH 906
             L  H+EKLA  YGLI      P  V                  +L N+E +     R H
Sbjct: 1233 LLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVH 1292

Query: 907  HLRDGMCPCADN 918
            H RDG C C ++
Sbjct: 1293 HFRDGKCSCNNS 1304



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 151/340 (44%), Gaps = 32/340 (9%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +L      +  + N+L+ MYSR G L  +R++F+ M DR+L SWNSI+++Y  
Sbjct: 645 GRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTR 704

Query: 132 SG----------EGNAENVTEGFRLFRSL----------RESITFTSRLTLA-------- 163
            G          E     +      + SL          R++I    R+ +A        
Sbjct: 705 LGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSS 764

Query: 164 --PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
              LL+     G V   + +HGY ++  L +D +V   L+++Y K G +  A+ +FD M 
Sbjct: 765 ISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 824

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
           E+++V W  ++   +  G  +E   L   + + G+  +  +   ++   +  GK   E+ 
Sbjct: 825 EKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGK--TEKA 882

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
            A   K+       NVV W   LSG  + G+    ++ F+ M    V  +S T    L  
Sbjct: 883 LAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRI 942

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           +     L  G+++H   LK+       V  +L++MY+K G
Sbjct: 943 LGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSG 982



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 71/307 (23%)

Query: 35   SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
            ++++L  +Q +    ++SS    S+L+       + LGK+ H  ++ +    D ++   L
Sbjct: 746  AIAVLKRIQIAGLKPNTSSIS--SLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTL 803

Query: 95   MTMYSRCGSLVYARRLFDKMPDRDLI---------------------------------- 120
            + MY + G L YAR +FD M +++++                                  
Sbjct: 804  IDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNA 863

Query: 121  -SWNSILAAYAHSGE--------------GNAENVT----------------EGFRLFRS 149
             +WNS+++ YA  G+              G   NV                  G ++F  
Sbjct: 864  VTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLK 923

Query: 150  LRESITFTSRLTLAPLLKL--CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
            ++E     +  T++ LL++  CLS   +++ + VH + LK  L  D  V+ ALV++Y+K 
Sbjct: 924  MQEEGVSPNSATISSLLRILGCLS--LLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKS 981

Query: 208  GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            G ++ A  +F G++ + +  W  M+  YA    GEE   +F  +  +G+ PD  +   VL
Sbjct: 982  GDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVL 1041

Query: 268  GVISDLG 274
             V  + G
Sbjct: 1042 SVCKNSG 1048



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 5/143 (3%)

Query: 33   SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
            +F   L  FL+      S +S+   S+LR     S L  GK  H+  L ++   D  +  
Sbjct: 913  NFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVAT 972

Query: 93   NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
             L+ MY++ G L  A  +F  + ++ L SWN ++  YA    G      EG  +F ++ E
Sbjct: 973  ALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGE-----EGIAVFNAMLE 1027

Query: 153  SITFTSRLTLAPLLKLCLSSGYV 175
            +      +T   +L +C +SG V
Sbjct: 1028 AGIEPDAITFTSVLSVCKNSGLV 1050


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 183/529 (34%), Positives = 292/529 (55%), Gaps = 47/529 (8%)

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +YC+ G++++A ++F+     D+ +W  +I GY  +    +A+ L   M  +  R +  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
             + +KA G       G+QMHA A+K  ++ D+ V S +LDMY +C  M  A  +F+ + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           + ++V+W  +I+G     + +  L  + +M+ +G     FT++ +  A + + ALEQGR 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +HA+LIK       FVG +++ MYAK G++ DA  +F +MD R+ V WN ML  LAQ+G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G+E +  FE+++  G++ + +TF+ VL+ACS+ GLV E    F +M++ Y ++PE++HY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYV 299

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
             VD LGRAG  KEA   +  MP E +A++  ALLGACR+  + + G++ A+ +  L+P 
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           D+   VLL NI+A+  +W+D    R  MK   VKK+PA                      
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
              I+   E +  RIK+ GYVP+T  VLL + E+E+E  L YHSEK+A A+ LI+ P  +
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 892 VI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            I                     +  +E +    NRFHH  +G C C D
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGD 528



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 154/294 (52%), Gaps = 6/294 (2%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R + FT  S+L+A+ +   G  + +Q+H  A+K +   D +V +AL+D+Y R   M  A
Sbjct: 54  FRPNGFTFTSLLKATGACG-GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMA 112

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     +  +WNA+I G+    +    L  F+ M  +G      T ++   A   +
Sbjct: 113 IMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARI 172

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L+QG+ +HA+ +KSG +L   V + +L MY K G+MVDA+ +F+ +   D V W TM+
Sbjct: 173 GALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTML 232

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +     G    A++ + ++R  G+  ++ TF  ++ A S    +++G+  + +++K D +
Sbjct: 233 TALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKH-YFDMMK-DYN 290

Query: 626 SDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGE 676
             P +   +S VD+  + G +++A I   +M M  T  +W A+L     H N +
Sbjct: 291 VQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 344



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 12/262 (4%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFL 90
           +P+ ++ LLP + ++ F  +  +  + S+L+   +     +G+  HA  +  +   D ++
Sbjct: 38  MPAEAIGLLPDMLRARFRPNGFT--FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYV 95

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            + L+ MY+RC  +  A  +FD++  ++ +SWN+++A +A   +G    +      F  +
Sbjct: 96  GSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMK-----FAEM 150

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           + +    +  T + +       G +     VH + +K G     FV   ++ +Y+K G +
Sbjct: 151 QRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSM 210

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL--- 267
            +A+ +FD M +RD+V W  ML A A+ G G+E    F ++ + G+  +  +   VL   
Sbjct: 211 VDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTAC 270

Query: 268 --GVISDLGKRHEEQVQAYAIK 287
             G +   GK + + ++ Y ++
Sbjct: 271 SHGGLVKEGKHYFDMMKDYNVQ 292



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 49/297 (16%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CG++  AR +FDKMP RD++SW  ++A YA +         E   L   +  +   
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQN-----YMPAEAIGLLPDMLRARFR 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE--FVSGALVNIYSKFGKIREAK 214
            +  T   LLK   + G     E +H  A+K    WDE  +V  AL+++Y++  ++  A 
Sbjct: 56  PNGFTFTSLLKATGACGGCSIGEQMHALAVKYN--WDEDVYVGSALLDMYARCEQMDMAI 113

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD +  ++ V W  ++  +A    GE     F ++ R+G      +   +    + +G
Sbjct: 114 MVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIG 173

Query: 275 KRHEEQ-VQAYAI----KLLLYNNNS------------------------NVVLWNKKLS 305
              + + V A+ I    KL  +  N+                        ++V WN  L+
Sbjct: 174 ALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLT 233

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
              Q G    A+  F  + +  +Q + +TFL  L A +           HG  +K G
Sbjct: 234 ALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS-----------HGGLVKEG 279



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 134/347 (38%), Gaps = 80/347 (23%)

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y K G + +A+ +FD M  RDVV W  ++  YA+N    E   L  D+ R+   P+  +
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 263 VQCVLGVISDLGK-RHEEQVQAYAIK--------------------------LLLYNN-- 293
              +L      G     EQ+ A A+K                          +++++   
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           + N V WN  ++G+ +  D    +  F  M R+       T+    +A A    L  G+ 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +H   +KSG      VGN+++ MY+K G +                              
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 384 -------------CGLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSF 427
                        CG++ +Q T  SVL A S    + EG H    +  + ++ +   D +
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEI--DHY 298

Query: 428 VSTALIDVYCRNGSMAEAE-YLFENKDGFDLATWNAMIFGYILSNNS 473
           VS   +D+  R G + EA  ++F+       A W A++    +  N+
Sbjct: 299 VS--FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNA 343



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 21/195 (10%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           +HF+ SS  S +  I         L  G+  HA ++ S Q    F+ N ++ MY++ GS+
Sbjct: 158 THFTYSSMFSAFARI-------GALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSM 210

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
           V AR++FD+M  RDL++WN++L A A  G G      E    F  +R+     +++T   
Sbjct: 211 VDARKVFDRMDKRDLVTWNTMLTALAQYGLGK-----EAVAHFEEIRKCGIQLNQITFLS 265

Query: 165 LLKLCLSSGYVWASETVHGYAL----KIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDG 219
           +L  C   G V   E  H + +     +    D +VS   V++  + G ++EA  F+F  
Sbjct: 266 VLTACSHGGLV--KEGKHYFDMMKDYNVQPEIDHYVS--FVDLLGRAGLLKEALIFVFKM 321

Query: 220 MQERDVVLWKVMLRA 234
             E    +W  +L A
Sbjct: 322 PMEPTAAVWGALLGA 336


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 233/741 (31%), Positives = 351/741 (47%), Gaps = 133/741 (17%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL-VALAAVAGTDNLNLGQ 352
           N + V WN  ++   +  +   A+  F  M+  NV   S T + VA A     + L LG+
Sbjct: 148 NRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGK 207

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------------- 383
           Q+H   L++G +      N+L+ MY+K+G V                             
Sbjct: 208 QVHAFVLRNGDWRT-FTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQND 266

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI-KNDTVADSFV 428
                          G+R +  TLASVL A S L E L   K+IH   +  ND + +SFV
Sbjct: 267 RFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL-EMLGCGKEIHAFVLMNNDLIENSFV 325

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSG 487
             AL+D+YC      +   +F+      +A WNAMI GY+ +   ++A+ELF  M    G
Sbjct: 326 GCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELG 385

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              + +T+++ + AC         + +H+  +K GFE D  V + ++DMY + G +  A+
Sbjct: 386 LSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIAR 445

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS------------------GV 589
           SIF  +   D V+W TMI+G V  G  D AL++ H M+                     +
Sbjct: 446 SIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPL 505

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            P+  T   ++   + L AL +G++IHA  +K   S D  VG +LVDMYAKCG +  +  
Sbjct: 506 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRT 565

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-----VEPDSVTFIGVLSAC 704
           +F+QM +RN + WN +++    HG GEE LKLF  M   G     + P+ VT+I + ++ 
Sbjct: 566 VFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASL 625

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE-ASAS 763
           S++G+V E    F+ M+ K+GIEP  +HY+ LVD LGR+G+ +EA  LI +MP       
Sbjct: 626 SHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVD 685

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG-EM 822
              +LLGAC++  + E G+  A+ L  L+P          N+     +     S  G +M
Sbjct: 686 AWSSLLGACKIHQNLEIGEIAAKNLFVLDP----------NVLDYGTK----QSMLGRKM 731

Query: 823 KRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
           K K V+K+P                       +  +   +E L  R+K+ GYVPDT  VL
Sbjct: 732 KEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVL 791

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN---------------- 903
            +V EEEKE  L  HSE+LA A+GL++T P + I   K     N                
Sbjct: 792 HNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDRE 851

Query: 904 -------RFHHLRDGMCPCAD 917
                  RFHH R+G C C D
Sbjct: 852 IILRDVRRFHHFRNGTCSCGD 872



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 218/494 (44%), Gaps = 65/494 (13%)

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
           H AI  + NM+ + V  D+  F   L A AG  +LNLG+Q+H    K G      V NSL
Sbjct: 67  HQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSL 126

Query: 374 INMYSKMGCVCGLR-------------------------------------------TDQ 390
           +NMY K G +   R                                              
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           FTL SV  A S+L  GL L KQ+H   ++N     +F + AL+ +Y + G + EA+ LF+
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFVLRNGD-WRTFTNNALVTMYAKLGRVYEAKTLFD 245

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
             D  DL +WN +I     ++   +AL     M  SG R + +T+A+ + AC  L ML  
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305

Query: 511 GKQMHAYA-MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           GK++HA+  M +    +  V   ++DMY  C      + +F+ +       W  MI+G V
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYV 365

Query: 570 DNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
            N  +  A+ ++ +M    G+ P+  T + ++ A     +      IH+ ++K     D 
Sbjct: 366 RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDK 425

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL------- 681
           +V  +L+DMY++ G IE A  +F  M+ ++ V WN M+ G    G  ++ L L       
Sbjct: 426 YVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485

Query: 682 -----------FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
                      +ED K   ++P+SVT + VL  C+    + +  E  H    K  +  +V
Sbjct: 486 QAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQMLSKDV 544

Query: 731 EHYSFLVDALGRAG 744
              S LVD   + G
Sbjct: 545 AVGSALVDMYAKCG 558



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 273/619 (44%), Gaps = 122/619 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L+      DL LGK  HA +    Q     + N+L+ MY +CG +  ARR+FD++ +R
Sbjct: 90  AVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNR 149

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC--LSSGYV 175
           D +SWNS++ A     E   E     FRL   L E++  TS  TL  +   C  L +G +
Sbjct: 150 DDVSWNSMINAACRFEEW--ELAVHLFRLM--LLENVGPTS-FTLVSVAHACSNLINGLL 204

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH + L+ G  W  F + ALV +Y+K G++ EAK LFD   ++D+V W  ++ + 
Sbjct: 205 LGKQ-VHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSL 262

Query: 236 AENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIK-- 287
           ++N  F E + +L V L +SG+ P+  ++  VL   S L     GK    ++ A+ +   
Sbjct: 263 SQNDRFEEALLYLHVML-QSGVRPNGVTLASVLPACSHLEMLGCGK----EIHAFVLMNN 317

Query: 288 ------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECF 320
                       + +Y N                  + +WN  ++GY++   ++ AIE F
Sbjct: 318 DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELF 377

Query: 321 VNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           V M+    +  +SVT    L A    ++    + IH   +K GF     V N+L++MYS+
Sbjct: 378 VEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSR 437

Query: 380 MG---------------------------CVCG--------------------------- 385
           MG                            VCG                           
Sbjct: 438 MGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDY 497

Query: 386 -------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                  L+ +  TL +VL   ++L   L   K+IH +A+K     D  V +AL+D+Y +
Sbjct: 498 EDNKNFPLKPNSVTLMTVLPGCAAL-AALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAK 556

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-----RLDEI 493
            G +  +  +FE     ++ TWN +I  Y +     +AL+LF  M   G+     R +E+
Sbjct: 557 CGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEV 616

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           T      +     M+ +G  +  Y MK+  G E      + ++D+  + G + +A ++  
Sbjct: 617 TYIAIFASLSHSGMVDEGLNLF-YTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIK 675

Query: 552 DIPA--PDDVAWTTMISGC 568
            +P+      AW++++  C
Sbjct: 676 TMPSNMKKVDAWSSLLGAC 694



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 193/389 (49%), Gaps = 13/389 (3%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I+ Y+ M    G+  D F   +VL+A++ + + L+L KQ+H H  K      + V  +L+
Sbjct: 70  ISTYTNM-VTAGVPPDNFAFPAVLKATAGI-QDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           ++Y + G +  A  +F+     D  +WN+MI           A+ LF  M          
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187

Query: 494 TIATAVKACGCLLM-LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           T+ +   AC  L+  L  GKQ+HA+ +++G +     ++ ++ MY K G + +A+++F+ 
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDV 246

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
               D V+W T+IS    N   + AL   H M  SGV P+  T A ++ A S L  L  G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306

Query: 613 RQIHA-NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           ++IHA  L+  D   + FVG +LVDMY  C   E   ++F  M  R   +WNAM+ G  +
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366

Query: 672 HGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAY---ENFHLMREKYGIE 727
           +    E ++LF +M    G+ P+SVT   VL AC    +  E++   E  H    K+G E
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPAC----VRCESFLDKEGIHSCVVKWGFE 422

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSM 756
            +    + L+D   R GR + A  +  SM
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSM 451



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 168/347 (48%), Gaps = 18/347 (5%)

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S+  H+A+  +++M T+G   D       +KA   +  L  GKQ+HA+  K G  L   V
Sbjct: 63  SSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAV 122

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +++MY KCG +  A+ +F++I   DDV+W +MI+      E +LA+ ++  M L  V
Sbjct: 123 PNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENV 182

Query: 590 VPDEFTFAILVKA-SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
            P  FT   +  A S+ +  L  G+Q+HA +++ +     F   +LV MYAK G + +A 
Sbjct: 183 GPTSFTLVSVAHACSNLINGLLLGKQVHAFVLR-NGDWRTFTNNALVTMYAKLGRVYEAK 241

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            LF   D ++ V WN ++  L+Q+   EE L     M   GV P+ VT   VL ACS+  
Sbjct: 242 TLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLE 301

Query: 709 LVSEAYE--NFHLMREKYGIEPEVEHYSF----LVDALGRAGRTKEAGELILSMPFEASA 762
           ++    E   F LM        ++   SF    LVD      +  E G L+    F  + 
Sbjct: 302 MLGCGKEIHAFVLMNN------DLIENSFVGCALVDMYCNC-KQPEKGRLVFDGMFRRTI 354

Query: 763 SMHRALL-GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           ++  A++ G  R + D E  +   E  M  E   S   V LS++  A
Sbjct: 355 AVWNAMIAGYVRNEFDYEAIELFVE--MVFELGLSPNSVTLSSVLPA 399



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 13/219 (5%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           S +S    S+L   +     L  +  H+ ++      D+++ N LM MYSR G +  AR 
Sbjct: 387 SPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARS 446

Query: 110 LFDKMPDRDLISWNSILAAYAHSGE-------------GNAENVTEGFRLFRSLRESITF 156
           +F  M  +D++SWN+++  Y   G              G AE+    F  +   +     
Sbjct: 447 IFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLK 506

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            + +TL  +L  C +   +   + +H YA+K  L  D  V  ALV++Y+K G +  ++ +
Sbjct: 507 PNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTV 566

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           F+ M  R+V+ W V++ AY  +G GEE   LF  +   G
Sbjct: 567 FEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEG 605



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 46  HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           +F    +S    ++L    + + L  GK  HA  +      D  + + L+ MY++CG L 
Sbjct: 502 NFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLN 561

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
            +R +F++M  R++I+WN ++ AY   G+G      E  +LFR + E
Sbjct: 562 LSRTVFEQMSVRNVITWNVLIMAYGMHGKGE-----EALKLFRRMVE 603


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/586 (33%), Positives = 300/586 (51%), Gaps = 80/586 (13%)

Query: 412 QIHVHAIKNDTVADSFVSTALID--VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           QIH   I     +D+FV++ ++       +GS+  A +LF      D+   N +I  Y  
Sbjct: 53  QIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAF 112

Query: 470 SNNSHKALELFSHMHTSGERLDEI-TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           S N   A+  +S M  S     ++ T    +KAC  +  L+ G+ +H++  K G+  ++ 
Sbjct: 113 SPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVS 172

Query: 529 VSSGILDMY-------------------------------VKCGAMVDAQSIFNDIPAPD 557
           VS+ ++ MY                               +KCG    A+ +F  +P  D
Sbjct: 173 VSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRD 232

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+W+ MI+G V        L ++  M    + P+E      + A + L A+EQG+ I  
Sbjct: 233 VVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIER 292

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            + + +      +G +L+DMY+KCG++E A  +F +M  +N + W+AM+ GLA +G G++
Sbjct: 293 YMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKD 352

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L LF  M+  GV+P+ VTFIG+L+ACS++ LV E    FH M   YG++P   H+  +V
Sbjct: 353 ALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMV 412

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D  GRAG   +A  +I SMPF+ ++++  ALL ACR+ GDTE G+ V ++L+ L+P    
Sbjct: 413 DLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGG 472

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DL 834
            YVLLSNI+AA  +WD V   R  M+ + V K P                        ++
Sbjct: 473 RYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEM 532

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           I+AK+  + + +K  GY PDT  VLLD++EEEKE AL +HSEKLA A+GLI T P + I 
Sbjct: 533 IYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIR 592

Query: 894 --------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                               + N+E +  +  RFHH RDG C C D
Sbjct: 593 ITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMD 638



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 172/384 (44%), Gaps = 43/384 (11%)

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           YS+M     +  D  T   +L+A S +P  L L + IH H  K    ++  VS  L+ +Y
Sbjct: 123 YSEMTESSVVFPDVHTFPLLLKACSEIPS-LRLGEAIHSHVFKLGWSSEVSVSNFLVQMY 181

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS---------- 486
              G +  A  +F+     D A+WN MI GY+       A  +F  M             
Sbjct: 182 ASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMIN 241

Query: 487 -------------------GERLD--EITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
                              GE+++  E  +  A+ AC  L  ++QG+ +  Y  +    L
Sbjct: 242 GYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRL 301

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
            + + + ++DMY KCG++  A  +F+ +   + +AW+ MI+G   NG+   AL+++ QM 
Sbjct: 302 TVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQME 361

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNI 644
           + GV P+E TF  ++ A S    +++G     ++  +     +      +VD+Y + G +
Sbjct: 362 MQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGML 421

Query: 645 EDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLK-LFEDMKAHGVEPDSVTFIG 699
           + A  + K M  + N+ +W A+L     HG+   GE+  K L E    HG     V    
Sbjct: 422 DQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGR--YVLLSN 479

Query: 700 VLSACSYTGLVSEAYENFHLMREK 723
           + +AC     V+E      +MRE+
Sbjct: 480 IYAACGRWDRVAELRR---MMRER 500



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 5/180 (2%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++  Y +CG    ARR+F+ MPDRD++SW+ ++  Y            EG  LF+ + 
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESR-----FKEGLGLFQDMM 260

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 +   L   L  C   G +   + +  Y  +  +     +  AL+++YSK G + 
Sbjct: 261 GEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVE 320

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A  +F  M+E++V+ W  M+   A NG G++  +LF  +   G+ P++ +   +L   S
Sbjct: 321 RALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACS 380



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 178/447 (39%), Gaps = 77/447 (17%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKM 114
           + ILRH  S   L      HA+ + +    D F+ + +++    S  GS+ YAR LF ++
Sbjct: 36  YPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRI 95

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES-ITFTSRLTLAPLLKLCLSSG 173
              D+   N+++ AYA S      N  +    +  + ES + F    T   LLK C    
Sbjct: 96  RKPDIFIANTLIRAYAFS-----PNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIP 150

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYS---------------------------- 205
            +   E +H +  K+G   +  VS  LV +Y+                            
Sbjct: 151 SLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIG 210

Query: 206 ---KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
              K G  + A+ +F+ M +RDVV W VM+  Y +    +E   LF D+    + P++  
Sbjct: 211 GYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESV 270

Query: 263 VQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
           +   L   + LG    EQ Q     +   N    V L    +  Y + G    A+E F  
Sbjct: 271 LVNALSACAHLGAM--EQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHK 328

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M   NV          LA  A  + L +  Q                G   +N++S+M  
Sbjct: 329 MKEKNV----------LAWSAMINGLAINGQ----------------GKDALNLFSQME- 361

Query: 383 VCGLRTDQFTLASVLRASSS---LPEGLHLSKQI-HVHAIKNDTVADSFVSTALIDVYCR 438
           + G++ ++ T   +L A S    + EG      +  ++ +K     ++     ++D+Y R
Sbjct: 362 MQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLK----PNAHHHCCMVDLYGR 417

Query: 439 NGSMAEAEYLFENKD-GFDLATWNAMI 464
            G + +A+ + ++     + A W A++
Sbjct: 418 AGMLDQAQTVIKSMPFKPNSAIWGALL 444


>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
 gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
          Length = 681

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 221/689 (32%), Positives = 331/689 (48%), Gaps = 73/689 (10%)

Query: 179 ETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + +H    K GL+     ++  L+ +Y++ G + +A  LFD M  R+   W  M+  Y +
Sbjct: 25  KQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMK 84

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +G  E    LF D+  +    +D S   V    S   K  E ++   A +L     N N 
Sbjct: 85  SGNKERSIRLF-DMMSN---KNDYSWNVVF---SGFAKAGEMEI---ARRLFNEMPNRNG 134

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV-TFLVALAAVAGTD--NLNLGQQI 354
           V+WN  +  Y + G    A+  F  +    +      TF++A    A TD   +  G+QI
Sbjct: 135 VVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQI 194

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
           H   L        ++ +SLIN+Y K G           L S     +++ E         
Sbjct: 195 HARILIDNMELDSVLTSSLINLYGKCG----------DLDSAHCVLNTMEE--------- 235

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
                     D F  +ALI  Y  +G M +A   F  K    +  WN++I GY+ +N   
Sbjct: 236 ---------PDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEI 286

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +A  LF+ M   G ++D  T+AT + AC  L   + GKQMHAYA K G   D  V+S  +
Sbjct: 287 EAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFI 346

Query: 535 DMYVKCGAM-------------------------------VDAQSIFNDIPAPDDVAWTT 563
           D Y KCG++                                DA+ IFN +P+   ++W +
Sbjct: 347 DAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNS 406

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI G   NG    AL ++  M    +  + F    ++ A + +++LE G QI A    + 
Sbjct: 407 MIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVG 466

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             SD  +  SLVD Y KCG IE    LF  M   + + WN+ML+G A +G+G E L LF 
Sbjct: 467 LDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFN 526

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           +M+  GV P  +TF GVLSAC + GLV E +  F++M+  Y I+P +EHYS +VD   RA
Sbjct: 527 EMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARA 586

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  +EA  LI  MPFEA ASM  ++L  C   G+ + G+ VA++++ L+P +S AYV LS
Sbjct: 587 GCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLS 646

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +IFA +  W+     R  M+ + V+K P 
Sbjct: 647 SIFATSGDWESSALVRKVMQERQVQKYPG 675



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 179/660 (27%), Positives = 301/660 (45%), Gaps = 122/660 (18%)

Query: 72  GKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           GK  H        I     L N L+ MY+RCGS+  A +LFD+MP R+  SWN+++  Y 
Sbjct: 24  GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYM 83

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            SG     N     RLF  +     ++                                 
Sbjct: 84  KSG-----NKERSIRLFDMMSNKNDYS--------------------------------- 105

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
            W+   SG     ++K G++  A+ LF+ M  R+ V+W  M+ +YA NG   E   LF +
Sbjct: 106 -WNVVFSG-----FAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKE 159

Query: 251 LHRSGL---CPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           L+   L   C D   +  V+G  +DLG+ +  +Q+ A   ++L+ N   + VL +  ++ 
Sbjct: 160 LNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHA---RILIDNMELDSVLTSSLINL 216

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY-- 364
           Y + GD   A  C +N +    + D  +    +   A    +N          +  FY  
Sbjct: 217 YGKCGDLDSA-HCVLNTME---EPDDFSLSALITGYANHGRMN--------DARRAFYRK 264

Query: 365 --SAVIVGNSLIN-------------MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
             S V+V NSLI+             +++ M    GL+ D  TLA++L A SSL    H 
Sbjct: 265 SNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQ-KKGLKVDFSTLATILSACSSLCNSQH- 322

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD------------- 456
            KQ+H +A K   + D+ V++A ID Y + GS+ +A  LF     +D             
Sbjct: 323 GKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSN 382

Query: 457 ------------------LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
                             L +WN+MI G   +    +AL+LF  M+    R++   + + 
Sbjct: 383 SGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSV 442

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC  +  L+ G+Q+ A A   G + D  +S+ ++D Y KCG +   + +F+ +   D+
Sbjct: 443 ISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDE 502

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           ++W +M+ G   NG    AL+++++MR +GV P E TF  ++ A      +++G +   N
Sbjct: 503 ISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWF-N 561

Query: 619 LIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHG 673
           +++ D   DP  GI     +VD++A+ G +E+A  L K+M    +  +W+++L G   HG
Sbjct: 562 IMQYDYHIDP--GIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHG 619



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 120/549 (21%), Positives = 218/549 (39%), Gaps = 136/549 (24%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++  GK  HARIL  +   D  LT++L+ +Y +CG L  A  + + M + D  S ++++ 
Sbjct: 187 EIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALIT 246

Query: 128 AYAHSGEGNAEN---------------------VT-----EGFRLFRSLRESITFTSRLT 161
            YA+ G  N                        VT     E F LF  +++        T
Sbjct: 247 GYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFST 306

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           LA +L  C S       + +H YA K+GL+ D  V+ A ++ YSK G + +A  LF  ++
Sbjct: 307 LATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELK 366

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
             D +L   M+  Y+ +G  E+   +F  +    L                         
Sbjct: 367 TYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSL------------------------- 401

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                           + WN  + G  Q G    A++ F  M + +++ +       ++A
Sbjct: 402 ----------------ISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISA 445

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
            A   +L LG+QI       G  S  ++  SL++ Y    C CG                
Sbjct: 446 CASISSLELGEQIFARATVVGLDSDEVISTSLVDFY----CKCGF--------------- 486

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                + + +++    +K+D +                                   +WN
Sbjct: 487 -----IEIGRKLFDTMMKSDEI-----------------------------------SWN 506

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHA 516
           +M+ GY  + +  +AL LF+ M  +G R  EIT    + AC    ++K+G +      + 
Sbjct: 507 SMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYD 566

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEED 575
           Y +  G E   C    ++D++ + G + +A ++   +P   D + W++++ GC+ +GE+D
Sbjct: 567 YHIDPGIEHYSC----MVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKD 622

Query: 576 LALSIYHQM 584
           L   +  Q+
Sbjct: 623 LGEKVAQQI 631



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    S S L LG+   AR        D  ++ +L+  Y +CG +   R+LFD M   
Sbjct: 441 SVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKS 500

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSS 172
           D ISWNS+L  YA +G G      E   LF  +R +    + +T   +L  C     +  
Sbjct: 501 DEISWNSMLMGYATNGHG-----LEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKE 555

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
           G+ W +   + Y +  G+   E  S  +V+++++ G + EA  L   M  E D  +W  +
Sbjct: 556 GWRWFNIMQYDYHIDPGI---EHYS-CMVDLFARAGCLEEAMNLIKRMPFEADASMWSSV 611

Query: 232 LR---AYAENGFGEEVFHLFVDL 251
           LR   A+ E   GE+V    ++L
Sbjct: 612 LRGCMAHGEKDLGEKVAQQIIEL 634


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/648 (30%), Positives = 336/648 (51%), Gaps = 69/648 (10%)

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  FV M  S    D   F   L +     +L  G+ +HG  ++ G    +  GN+L+N
Sbjct: 89  ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           MY+K+    G+ +      SV      +P+    S          D  A++ +    ID 
Sbjct: 149 MYAKL---LGMGSK----ISVGNVFDEMPQRTSNSGD-------EDVKAETCIMPFGIDS 194

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
             R         +FE     D+ ++N +I GY  S     AL +   M T+  + D  T+
Sbjct: 195 VRR---------VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           ++ +      + + +GK++H Y ++ G + D+ + S ++DMY K   + D++ +F+ +  
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D ++W ++++G V NG  + AL ++ QM  + V P    F+ ++ A + L  L  G+Q+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +++    S+ F+  +LVDMY+KCGNI+ A  +F +M++ + V W A+++G A HG+G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E + LFE+MK  GV+P+ V F+ VL+ACS+ GLV EA+  F+ M + YG+  E+EHY+ 
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           + D LGRAG+ +EA   I  M  E + S+   LL +C V  + E  + VAEK+  ++  +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
             AYVL+ N++A+  +W ++   R  M++K ++K PA                       
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           D I   ++ +++++++ GYV DT  VL DV+EE K   L+ HSE+LA A+G+I+T P + 
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665

Query: 893 I---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           I                     ++ +E +  +  RFHH   G C C D
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGD 713



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 38/383 (9%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +KQ+H   I+  +++ +  S  +I +Y     + EA  LF+      +  W ++I  +  
Sbjct: 24  AKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
            +   KAL  F  M  SG   D     + +K+C  ++ L+ G+ +H + ++ G + DL  
Sbjct: 83  QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142

Query: 530 SSGILDMYVKC---GAMVDAQSIFNDIPA------------------------------- 555
            + +++MY K    G+ +   ++F+++P                                
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202

Query: 556 --PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D V++ T+I+G   +G  + AL +  +M  + + PD FT + ++   S    + +G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           +IH  +I+    SD ++G SLVDMYAK   IED+  +F ++  R+ + WN+++ G  Q+G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
              E L+LF  M    V+P +V F  V+ AC++   +    +  H    + G    +   
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIA 381

Query: 734 SFLVDALGRAGRTKEAGELILSM 756
           S LVD   + G  K A ++   M
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRM 404



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 17/291 (5%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D++ GK  H  ++      D ++ ++L+ MY++   +  + R+F ++  RD ISWNS++A
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y  +G  N     E  RLFR +  +      +  + ++  C     +   + +HGY L+
Sbjct: 317 GYVQNGRYN-----EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   + F++ ALV++YSK G I+ A+ +FD M   D V W  ++  +A +G G E   L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F ++ R G+ P+  +   VL   S +G   E    A+      +N+ + V   N++L  Y
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDE----AWG----YFNSMTKVYGLNQELEHY 483

Query: 308 LQVGD---NHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
             V D     G +E   N I +  V+     +   L++ +   NL L +++
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 152/375 (40%), Gaps = 70/375 (18%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           FS +L  F++          + + S+L+      DL  G+S H  I+      D +  N 
Sbjct: 86  FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145

Query: 94  LMTMYSRC---GSLVYA---------------------------------RRLFDKMPDR 117
           LM MY++    GS +                                   RR+F+ MP +
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++S+N+I+A YA SG        +  R+ R +  +       TL+ +L +      V  
Sbjct: 206 DVVSYNTIIAGYAQSGM-----YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HGY ++ G+  D ++  +LV++Y+K  +I +++ +F  +  RD + W  ++  Y +
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
           NG   E   LF  +  + + P   +   V+   + L   H  +Q+  Y ++         
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380

Query: 288 ----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               + +Y+   N+               V W   + G+   G  H A+  F  M R  V
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440

Query: 329 QYDSVTFLVALAAVA 343
           + + V F+  L A +
Sbjct: 441 KPNQVAFVAVLTACS 455



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/404 (20%), Positives = 171/404 (42%), Gaps = 73/404 (18%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           SSS +   +++++          K  HA+ + +  +      + ++++Y+    L  A  
Sbjct: 2   SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLLHEALL 60

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           LF  +    +++W S++  +      +    ++    F  +R S           +LK C
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFT-----DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSC 115

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK----------------------- 206
                +   E+VHG+ +++G+  D +   AL+N+Y+K                       
Sbjct: 116 TMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSN 175

Query: 207 --------------FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
                         FG I   + +F+ M  +DVV +  ++  YA++G  E+   +  ++ 
Sbjct: 176 SGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234

Query: 253 RSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIK-------------LLLYNNNSNV- 297
            + L PD  ++  VL + S+ +     +++  Y I+             + +Y  ++ + 
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294

Query: 298 --------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                         + WN  ++GY+Q G  + A+  F  M+ + V+  +V F   + A A
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA 354

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
               L+LG+Q+HG  L+ GF S + + ++L++MYSK G +   R
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 40/292 (13%)

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           I T +K    +    Q KQ+HA  +++   L    +S ++ +Y     + +A  +F  + 
Sbjct: 8   IKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLK 66

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           +P  +AW ++I    D      AL+ + +MR SG  PD   F  ++K+ + +  L  G  
Sbjct: 67  SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAK---------CGN---------------------- 643
           +H  +++L    D + G +L++MYAK          GN                      
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186

Query: 644 -----IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
                I+    +F+ M  ++ V +N ++ G AQ G  E+ L++  +M    ++PDS T  
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246

Query: 699 GVLSACS-YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            VL   S Y  ++     + +++R+  GI+ +V   S LVD   ++ R +++
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDS 296


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 188/553 (33%), Positives = 301/553 (54%), Gaps = 47/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K++  + I +    D ++   ++ ++ + G M +A  LF+     ++ +WN +I G + +
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  +A  LF  M             T ++A   L ++  G+Q+H+ ++K+G   D+ V+
Sbjct: 211 GDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVA 270

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMY KCG++ DAQ +F+ +P    V W ++I+G   +G  + ALS+Y++MR SGV 
Sbjct: 271 CALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK 330

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D FTF+I+++  + L +LE  +Q HA L++     D     +LVD+Y+K G IEDA  +
Sbjct: 331 IDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHV 390

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  +N + WNA++ G   HG G E +++FE M   G+ P+ VTF+ VLSACSY+GL 
Sbjct: 391 FDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLS 450

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +E F  M   + I+P   HY+ +++ LGR G   EA  LI   PF+ + +M  ALL 
Sbjct: 451 DRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLT 510

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK----- 825
           ACRV  + E GK+ AEKL  + P   S YV+L NI+  + + ++  +    +KR+     
Sbjct: 511 ACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRML 570

Query: 826 ------NVKKDP------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
                  +KK P            +  I+ K++ L+  I + GYVP   F+L DV+E+E 
Sbjct: 571 PACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQE- 629

Query: 868 ERALYYHSEKLARAYGLISTP---PSSVILSN------------------KEPLY--ANR 904
           ER L YHSEKLA A+GLI+T    P  ++ S+                  +E +   A+R
Sbjct: 630 ERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASR 689

Query: 905 FHHLRDGMCPCAD 917
           FHH +DG C C D
Sbjct: 690 FHHFKDGSCSCGD 702



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 165/299 (55%), Gaps = 4/299 (1%)

Query: 474 HKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           H+ALELF  +  +G   +D  T    V AC  L  ++  K++  Y + SG + D  + + 
Sbjct: 112 HEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNR 171

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +L M+VKCG M+DA+ +F+++P  + ++W T+I G VD G+   A  ++  M        
Sbjct: 172 VLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAG 231

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
              F  +++AS+ L  +  GRQ+H+  +K     D FV  +L+DMY+KCG+IEDA  +F 
Sbjct: 232 SRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFD 291

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           QM  + TV WN+++ G A HG  EE L ++ +M+  GV+ D+ TF  ++  C+    +  
Sbjct: 292 QMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEH 351

Query: 713 AYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           A + +  L+R  +G+  ++   + LVD   + GR ++A  +   MP +   S +  + G
Sbjct: 352 AKQAHAGLVRHGFGL--DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 154/305 (50%), Gaps = 34/305 (11%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           ++NS   PD +L N ++ M+ +CG ++ ARRLFD+MP+++++SWN+I+     +G     
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG----- 211

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           +  E FRLF  + +  +         +++     G ++A   +H  +LK G+  D FV+ 
Sbjct: 212 DYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++YSK G I +A+ +FD M E+  V W  ++  YA +G+ EE   ++ ++  SG+  
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331

Query: 259 DDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNN----------- 293
           D+ +   ++ + + L    H +Q  A  ++             + LY+            
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + NV+ WN  ++GY   G    A+E F  M+   +  + VTFL  L+A + +   +
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSD 451

Query: 350 LGQQI 354
            G +I
Sbjct: 452 RGWEI 456



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 5/231 (2%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           FL      S + S  + +++R +     +  G+  H+  L +    D F+   L+ MYS+
Sbjct: 220 FLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSK 279

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CGS+  A+ +FD+MP++  + WNSI+A YA  G        E   ++  +R+S       
Sbjct: 280 CGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSE-----EALSMYYEMRDSGVKIDNF 334

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T + ++++C     +  ++  H   ++ G   D   + ALV++YSK+G+I +AK +FD M
Sbjct: 335 TFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMM 394

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
             ++V+ W  ++  Y  +G G E   +F  +   G+ P+  +   VL   S
Sbjct: 395 PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 66/354 (18%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N++ WN  + G +  GD   A   F+ M +      S  F+  + A AG   +  G+Q+H
Sbjct: 196 NILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLH 255

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG------CV-------------------------- 383
             +LK+G    V V  +LI+MYSK G      CV                          
Sbjct: 256 SCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSE 315

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ D FT + ++R  + L    H +KQ H   +++    D   +TAL
Sbjct: 316 EALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEH-AKQAHAGLVRHGFGLDIVANTAL 374

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D+Y + G + +A+++F+     ++ +WNA+I GY       +A+E+F  M   G   + 
Sbjct: 375 VDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNH 434

Query: 493 ITIATAVKACGCLLMLKQG----------KQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           +T    + AC    +  +G           ++   AM     ++L    G+LD       
Sbjct: 435 VTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD------- 487

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
             +A ++  D P  P    W  +++ C     ++  L  +   +L G+ P++ +
Sbjct: 488 --EAFALIKDAPFKPTVNMWAALLTAC--RVHKNFELGKFAAEKLYGMGPEKLS 537



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 41/256 (16%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   L+  C+    +   + V  Y +  GL  DE++   ++ ++ K G + +A+ LFD M
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFV------------------------------- 249
            E++++ W  ++    + G   E F LF+                               
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 250 DLHRSGL---CPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LH   L      D  V C L  + S  G   + Q       +         V WN  ++
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC------VFDQMPEKTTVGWNSIIA 306

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY   G +  A+  +  M  S V+ D+ TF + +   A   +L   +Q H   ++ GF  
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366

Query: 366 AVIVGNSLINMYSKMG 381
            ++   +L+++YSK G
Sbjct: 367 DIVANTALVDLYSKWG 382


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 238/769 (30%), Positives = 355/769 (46%), Gaps = 139/769 (18%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           A+++ Y +  K   A+ LFD M ERD+  W VML  Y  N                    
Sbjct: 85  AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRN-------------------- 124

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
                 C LG                A +L       +VV WN  LSGY Q G    A E
Sbjct: 125 ------CRLGD---------------ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F NM   N    S+++   LAA            +H   ++      +    S  ++ S
Sbjct: 164 VFDNMPEKN----SISWNGLLAAY-----------VHNGRIEEA--CLLFESKSDWDLIS 206

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
              C+ G    +  L         +P                  V D+     +I  Y +
Sbjct: 207 -WNCLMGGFVRKKKLGDARWLFDKMP------------------VRDAISWNTMISGYAQ 247

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G +++A  LF+     D+ TW AM+ GY+ +    +A   F  M    E      IA  
Sbjct: 248 GGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGY 307

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLC--VSS--GILDMYVKCGAMVDAQSIFNDIP 554
           V          Q K+M     +  FE   C  +SS   ++  Y + G +  A+  F+ +P
Sbjct: 308 V----------QTKKMDI--ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMP 355

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V+W  +I+G   +G  + AL+++ +++  G   +  TF   +   + + ALE G+Q
Sbjct: 356 QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH   +K+   +  FVG +L+ MY KCG+I++A   F+ ++ ++ V WN ML G A+HG 
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G + L +FE MK  GV+PD +T +GVLSACS+TGL+    E F+ M + YG+ P  +HY+
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYT 535

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            ++D LGRAGR +EA +LI +MPF+  A+   ALLGA R+ G+TE G+  AE +  +EP 
Sbjct: 536 CMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 595

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +S  YVLLSN++AA+ +W D    R +M+   V+K P                       
Sbjct: 596 NSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPE 655

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            + I+A +E L  +++E GYV  T  VL DVEEEEKE  L YHSEKLA A+G+++ P   
Sbjct: 656 KERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGR 715

Query: 892 VILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            I   K                           ++RFHH  +G C C D
Sbjct: 716 PIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGD 764



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 235/535 (43%), Gaps = 98/535 (18%)

Query: 84  QIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P+R  F  N ++T Y R   L  ARRLFD MP++D++SWNS+L+ YA +G      V 
Sbjct: 105 QMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY-----VD 159

Query: 142 EGFRLFRSLRE--SITFTS---------RLTLAPLL-----------KLCLSSGYV---- 175
           E   +F ++ E  SI++           R+  A LL             CL  G+V    
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 176 -----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                W  + +    ++  + W+  +SG     Y++ G + +A+ LFD    RDV  W  
Sbjct: 220 LGDARWLFDKM---PVRDAISWNTMISG-----YAQGGGLSQARRLFDESPTRDVFTWTA 271

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ---CVLGVISDLGKRHEEQVQAYAIK 287
           M+  Y +NG  +E    F ++      P+   V     + G +         Q +   I 
Sbjct: 272 MVSGYVQNGMLDEAKTFFDEM------PEKNEVSYNAMIAGYV---------QTKKMDIA 316

Query: 288 LLLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
             L+ +    N+  WN  ++GY Q+GD   A + F  M     Q D V++   +A  A  
Sbjct: 317 RELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM----PQRDCVSWAAIIAGYA-- 370

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
                         +SG Y   +      NM+ ++    G   ++ T    L   + +  
Sbjct: 371 --------------QSGHYEEAL------NMFVEIK-QDGESLNRATFGCALSTCADIA- 408

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L L KQIH  A+K       FV  AL+ +Y + GS+ EA   FE  +  D+ +WN M+ 
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           GY       +AL +F  M T+G + DEIT+   + AC    +L +G + + Y+M   + +
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE-YFYSMTKDYGV 527

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                  + ++D+  + G + +AQ +  ++P  P   +W  ++     +G  +L 
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 42/304 (13%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + +   + D    N +++ Y++ G L  ARRLFD+ P RD+ +W ++++ Y  +G     
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGM---- 281

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
            + E    F  + E    +    +A  ++   +     A E       +    W+  ++G
Sbjct: 282 -LDEAKTFFDEMPEKNEVSYNAMIAGYVQ---TKKMDIARELFESMPCRNISSWNTMITG 337

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
                Y + G I +A+  FD M +RD V W  ++  YA++G  EE  ++FV++ + G   
Sbjct: 338 -----YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESL 392

Query: 259 DDESVQCVLGVISD-----LGKR-HEEQVQ-AYAIKLLLYN------------------- 292
           +  +  C L   +D     LGK+ H + V+  Y     + N                   
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452

Query: 293 ---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 +VV WN  L+GY + G    A+  F +M  + V+ D +T +  L+A + T  L+
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLD 512

Query: 350 LGQQ 353
            G +
Sbjct: 513 RGTE 516



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 138/341 (40%), Gaps = 62/341 (18%)

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I  + RNG    A ++F         ++NAMI GY+ ++  + A  LF  M         
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP-------- 107

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
                                          E DL   + +L  YV+   + DA+ +F+ 
Sbjct: 108 -------------------------------ERDLFSWNVMLTGYVRNCRLGDARRLFDL 136

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  D V+W +++SG   NG  D A  ++  M      P++ +    +  +  L A    
Sbjct: 137 MPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM------PEKNS----ISWNGLLAAYVHN 186

Query: 613 RQIHANLIKLDCSSDPFVGIS---LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
            +I    +  +  SD +  IS   L+  + +   + DA  LF +M +R+ + WN M+ G 
Sbjct: 187 GRIEEACLLFESKSD-WDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQ G   +  +LF++        D  T+  ++S     G++ EA   F  M EK  +   
Sbjct: 246 AQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS-- 299

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              Y+ ++    +  +   A EL  SMP    +S +  + G
Sbjct: 300 ---YNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITG 337



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H + +        F+ N L+ MY +CGS+  A   F+ + ++D++SWN++LA 
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAG 469

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALK 187
           YA  G G      +   +F S++ +      +T+  +L  C  +G +   +E  +     
Sbjct: 470 YARHGFGR-----QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKD 524

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEE 243
            G++        ++++  + G++ EA+ L   M  +     W  +L   R +     GE+
Sbjct: 525 YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEK 584



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 17/91 (18%)

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           YTGL+    E F+ M E+Y + P  +HY+ ++D LGR  R +E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDS 796
            ALLGA R+ G+TE G+  A+    + P +S
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNS 849



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 18/173 (10%)

Query: 546 AQSIFND----IPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILV 600
           ++S+ N+    +  PD + W   IS  + NG  D AL +++ M R S V  +      L 
Sbjct: 33  SESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLR 92

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            +   L           NL       D F    ++  Y +   + DA  LF  M  ++ V
Sbjct: 93  NSKFNLA---------RNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
            WN++L G AQ+G  +E  ++F++M     E +S+++ G+L+A  + G + EA
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEA 192


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/563 (33%), Positives = 307/563 (54%), Gaps = 54/563 (9%)

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L   +++H H IK   +  +++ T L+  Y +   + +A  + +     ++ +W AMI 
Sbjct: 66  ALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 125

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            Y  + +S +AL +F+ M  S  + +E T AT + +C     L  GKQ+H   +K  ++ 
Sbjct: 126 RYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDS 185

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
            + V S +LDMY K G + +A+ IF  +P  D V+ T +I+G    G ++ AL ++ +++
Sbjct: 186 HIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQ 245

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI---SLVDMYAKCG 642
             G+ P+  T+A L+ A S L  L+ G+Q H ++++ +    PF  +   SL+DMY+KCG
Sbjct: 246 SEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL---PFYAVLQNSLIDMYSKCG 302

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVL 701
           N+  A  LF  M  R  + WNAMLVG ++HG G E L+LF  M+    V+PD+VT + VL
Sbjct: 303 NLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 362

Query: 702 SACSYTGLVSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           S CS+  +       +  ++  +YGI+P+ EHY  +VD LGRAGR  EA E I  MP + 
Sbjct: 363 SGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 422

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
           +A +  +LLGACRV    + G++V  +L+ +EP ++  YV+LSN++A+A +W+DV + R 
Sbjct: 423 TAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRA 482

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
            M +K V K+P                        + + AK++ +  ++K+ GYVPD   
Sbjct: 483 MMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISC 542

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA---- 902
           VL DV+EE+KE+ L  HSEKLA  +GLI+T     I             N   +++    
Sbjct: 543 VLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFE 602

Query: 903 --------NRFHHLRDGMCPCAD 917
                   NRFH +  G+C C D
Sbjct: 603 REVSLRDKNRFHQIVKGICSCGD 625



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 4/276 (1%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           + ++FT A+VL  S     GL L KQIH   +K +  +  FV ++L+D+Y + G + EA 
Sbjct: 149 KPNEFTFATVL-TSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAR 207

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +FE     D+ +  A+I GY       +ALE+F  + + G R + +T A+ + A   L 
Sbjct: 208 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLA 267

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           +L  GKQ H + ++        + + ++DMY KCG +  AQ +F+++P    ++W  M+ 
Sbjct: 268 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLV 327

Query: 567 GCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           G   +G     L ++  MR    V PD  T   ++   S     + G  I+  ++  +  
Sbjct: 328 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYG 387

Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNT 659
             P       +VDM  + G I++A+   K+M  + T
Sbjct: 388 IKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 423



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 150/328 (45%), Gaps = 35/328 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L   +    L  G+  HA ++ +  +P  +L   L+  Y +C  L  AR++ D+MP++
Sbjct: 56  ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 115

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW ++++ Y+ +G       +E   +F  +  S    +  T A +L  C+ +  +  
Sbjct: 116 NVVSWTAMISRYSQTGHS-----SEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLAL 170

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  +K       FV  +L+++Y+K G+I EA+ +F+ + ERDVV    ++  YA+
Sbjct: 171 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQ 230

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK--------- 287
            G  EE   +F  L   G+ P+  +   +L  +S L    H +Q   + ++         
Sbjct: 231 LGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 290

Query: 288 ----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMI-RSN 327
               + +Y+   N+               + WN  L GY + G     +E F  M     
Sbjct: 291 QNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 350

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           V+ D+VT L  L+  +     + G  I+
Sbjct: 351 VKPDAVTLLAVLSGCSHGKMEDTGLSIY 378



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 145/341 (42%), Gaps = 53/341 (15%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A K+L      NVV W   +S Y Q G +  A+  F  M+RS+ + +  TF   L +   
Sbjct: 105 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIR 164

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------C------------ 384
              L LG+QIHG  +K  + S + VG+SL++MY+K G +        C            
Sbjct: 165 ASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAI 224

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G+R +  T AS+L A S L    H  KQ H H ++ +
Sbjct: 225 IAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDH-GKQAHCHVLRRE 283

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
               + +  +LID+Y + G+++ A+ LF+N       +WNAM+ GY       + LELF 
Sbjct: 284 LPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 343

Query: 482 HMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMH--AYAMKSGFELDLCVSSGILDMYV 538
            M      + D +T+   +  C    M   G  ++    A + G + D      I+DM  
Sbjct: 344 LMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLG 403

Query: 539 KCGAMVDAQSIFNDIPA-PDDVAWTTMISGC-----VDNGE 573
           + G + +A      +P+ P      +++  C     VD GE
Sbjct: 404 RAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 444


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 193/585 (32%), Positives = 305/585 (52%), Gaps = 50/585 (8%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   ++GY Q G    A+E +  M++S V  D  TF   + A +   ++ LG+Q+H
Sbjct: 128 NVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLH 187

Query: 356 GTTLKSGFYSAVIVGNSLINMYSK-----------------------------------M 380
              LKS F + +I  N+LI+MY+K                                   +
Sbjct: 188 AHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYEL 247

Query: 381 GCVCGLR---------TDQFTLASVLRASSSL--PEGLHLSKQIHVHAIKNDTVADSFVS 429
             +C  +          ++F   SV  A SSL  PE     +Q+H  +IK     D F  
Sbjct: 248 EALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE---YGRQLHGMSIKFGLGRDVFAG 304

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            +L D+Y + G ++ A  +F      DL  WNA+I G+    ++ +A+  FS M   G  
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            DEIT+ + + AC     L QG Q+H Y  K G +LD+ V + +L MY KC  + DA   
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424

Query: 550 FNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           F ++    D V+W  +++ C+ + + +    +   M +S   PD  T   ++ AS+   +
Sbjct: 425 FEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           +E G Q+H   +K   + D  V   L+D+YAKCG+++ A+ +F  M   + V W+++++G
Sbjct: 485 IEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILG 544

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQ G GEE LKLF+ M+   V+P+ VTF+GVL+ACS+ GLV E ++ +  M +++GI P
Sbjct: 545 YAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAP 604

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
             EH S +VD L RAG   EA   I  M F+    + + LL AC+  G+ + GK  AE +
Sbjct: 605 TREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENI 664

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPAD 833
           + ++P +S+A+VLL NI+A+   W+DV   R  MK++ V+K P  
Sbjct: 665 LKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQ 709



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/662 (23%), Positives = 272/662 (41%), Gaps = 118/662 (17%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H  +L S   PD  L N+++ MY +C SL  A+++FD MP+R+++SW S++A Y+ 
Sbjct: 82  GKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQ 141

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G+G           +  + +S     + T   ++K C S G +     +H + LK    
Sbjct: 142 NGQGG-----NALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFG 196

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD- 250
                  AL+++Y+K   I +A  +F  M  RD++ W  M+  +++ G+  E    F + 
Sbjct: 197 AHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEM 256

Query: 251 LHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNN---------------- 293
           LH+    P++     V    S  L   +  Q+   +IK  L  +                
Sbjct: 257 LHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGL 316

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         ++V WN  ++G+   GD   AI  F  M    +  D +T    L A
Sbjct: 317 LSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCA 376

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS----------------------- 378
                 L  G Q+HG   K G    V V N+L+ MY+                       
Sbjct: 377 CTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVS 436

Query: 379 ---------------------KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
                                K+ C+   R D  TL +VL AS+     + +  Q+H +A
Sbjct: 437 WNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS-IEIGNQVHCYA 495

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +K     D+ V+  LID+Y + GS+  A  +F++    D+ +W+++I GY       +AL
Sbjct: 496 LKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEAL 555

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDM 536
           +LF  M     + + +T    + AC  + ++++G +++    K  G        S ++D+
Sbjct: 556 KLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDL 615

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
             + G + +A+   + +   PD V W T+++ C  +G  D+                   
Sbjct: 616 LARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDV------------------- 656

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
                           G++   N++K+D  S+    + L ++YA  GN ED   L   M 
Sbjct: 657 ----------------GKRAAENILKID-PSNSAAHVLLCNIYASKGNWEDVARLRSLMK 699

Query: 656 MR 657
            R
Sbjct: 700 QR 701



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 6/218 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP-D 116
           S+L    S S+L  G   H  I       D  + N L+TMY++C  L  A   F++M  +
Sbjct: 372 SLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCN 431

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            DL+SWN+IL A     +  AE V   FRL + +  S      +TL  +L     +  + 
Sbjct: 432 ADLVSWNAILTACMRHDQ--AEEV---FRLLKLMCISQHRPDYITLTNVLGASAETVSIE 486

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               VH YALK GL  D  V+  L+++Y+K G ++ A  +FD M   DVV W  ++  YA
Sbjct: 487 IGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYA 546

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           + G+GEE   LF  + R  + P+  +   VL   S +G
Sbjct: 547 QFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVG 584


>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 190/614 (30%), Positives = 306/614 (49%), Gaps = 101/614 (16%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D   L ++ +  + L     + KQIH  +  +    D+FV  ++  +Y R G M +
Sbjct: 111 GLIPDSHVLPNLFKVCAEL-SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169

Query: 445 AEYLFENKDGFDLAT-----------------------------------WNAMIFGYIL 469
           A  +F+     D+ T                                   WN ++ G+  
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S    +A+ +F  +H  G   D++T+++ + + G   ML  G+ +H Y +K G   D CV
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDD------------------------------- 558
            S ++DMY K G +    S+FN     +                                
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349

Query: 559 ----VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+WT++I+GC  NG++  AL ++ +M+++GV P+  T   ++ A   + AL  GR 
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H   +++    +  VG +L+DMYAKCG I  + I+F  M  +N V WN+++ G + HG 
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            +E + +FE +    ++PD ++F  +LSAC   GL  E ++ F +M E+YGI+P +EHYS
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +V+ LGRAG+ +EA +LI  MPFE  + +  ALL +CR+Q + +  +  AEKL  LEP 
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +   YVLLSNI+AA   W +V S R +M+   +KK+P                       
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            D I  K++ + K +++ G+ P+ DF L DVEE+E+E+ L+ HSEKLA  +GL++TP  +
Sbjct: 650 IDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709

Query: 892 VILSNKEPLYANRF 905
                  PL   RF
Sbjct: 710 -------PLQVERF 716



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 268/600 (44%), Gaps = 82/600 (13%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HARIL S    D +++  L+  YS       A  +   +PD  + S++S++ A       
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT----- 92

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
            A+  T+   +F  +           L  L K+C         + +H  +   GL  D F
Sbjct: 93  KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V G++ ++Y + G++ +A+ +FD M ++DVV    +L AYA  G  EEV  +  ++  SG
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212

Query: 256 LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
           +                                      +N+V WN  LSG+ + G +  
Sbjct: 213 I-------------------------------------EANIVSWNGILSGFNRSGYHKE 235

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  F  +       D VT    L +V  ++ LN+G+ IHG  +K G      V +++I+
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295

Query: 376 MYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           MY K G V G+ +  +QF +                               ++ V  A I
Sbjct: 296 MYGKSGHVYGIISLFNQFEM------------------------------MEAGVCNAYI 325

Query: 434 DVYCRNGSMAEAEYLF----ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
               RNG + +A  +F    E     ++ +W ++I G   +    +ALELF  M  +G +
Sbjct: 326 TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            + +TI + + ACG +  L  G+  H +A++     ++ V S ++DMY KCG +  +Q +
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV 445

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           FN +P  + V W ++++G   +G+    +SI+  +  + + PD  +F  L+ A   +   
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505

Query: 610 EQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
           ++G + +  ++  +    P +     +V++  + G +++AY L K+M    ++ +W A+L
Sbjct: 506 DEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 160/354 (45%), Gaps = 36/354 (10%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           + Q H   +K+    D ++S  LI  Y       +A+ + ++     + +++++I+    
Sbjct: 34  TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +++ +FS M + G   D   +    K C  L   K GKQ+H  +  SG ++D  V
Sbjct: 94  AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPD-------------------------------- 557
              +  MY++CG M DA+ +F+ +   D                                
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213

Query: 558 ---DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+W  ++SG   +G    A+ ++ ++   G  PD+ T + ++ +      L  GR 
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH  +IK     D  V  +++DMY K G++     LF Q +M    + NA + GL+++G 
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            ++ L++FE  K   +E + V++  +++ C+  G   EA E F  M+   G++P
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKP 386



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 67/341 (19%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GK  H     S    D F+  ++  MY RCG +  AR++FD+M D+D+++ +++L AYA
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193

Query: 131 HSG-----------------EGNA---ENVTEGFRLFRSLRESITFTSRL---------- 160
             G                 E N      +  GF      +E++    ++          
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T++ +L     S  +     +HGY +K GL+ D+ V  A++++Y K G +     LF+  
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +  +  +    +   + NG  ++   +F                       +L K    +
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMF-----------------------ELFKEQTME 350

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
           +              NVV W   ++G  Q G +  A+E F  M  + V+ + VT    L 
Sbjct: 351 L--------------NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           A      L  G+  HG  ++      V VG++LI+MY+K G
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 13/217 (5%)

Query: 70  LLGKSTHA----RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR----DLIS 121
           + GKS H      + N  ++ +  + N  +T  SR G +  A  +F+   ++    +++S
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           W SI+A  A +G+       E   LFR ++ +    + +T+  +L  C +   +    + 
Sbjct: 356 WTSIIAGCAQNGKD-----IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           HG+A+++ L+ +  V  AL+++Y+K G+I  ++ +F+ M  +++V W  ++  ++ +G  
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +EV  +F  L R+ L PD  S   +L     +G   E
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 203/669 (30%), Positives = 334/669 (49%), Gaps = 92/669 (13%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------- 384
           +A  A T +L   + +H   +KSGF S   +G+ LI+ Y K G +               
Sbjct: 8   IAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHI 66

Query: 385 -----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                                        G+  D +T +++ +A S L    H  +   +
Sbjct: 67  VTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGL 126

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             +    V D FV++AL+D+Y +   M +A  +F      D+  + A+I GY       +
Sbjct: 127 AVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGE 186

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           AL++F  M   G + +E T+A  +  CG L  L  G+ +H   +KSG E  +   + +L 
Sbjct: 187 ALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLT 246

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY +C  + D+  +FN +   + V WT+ + G V NG E++A+SI+ +M    + P+ FT
Sbjct: 247 MYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFT 306

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            + +++A S L  LE G QIHA  +KL    + + G +L+++Y KCGN++ A  +F  + 
Sbjct: 307 LSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLT 366

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             + V  N+M+   AQ+G G E L+LFE +K  G+ P+ VTFI +L AC+  GLV E  +
Sbjct: 367 ELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQ 426

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  +R  + IE  ++H++ ++D LGR+ R +EA  LI  +       + R LL +C++ 
Sbjct: 427 IFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIH 485

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
           G+ E  + V  K++ L P D   ++LL+N++A+A +W+ V   +  ++   +KK PA   
Sbjct: 486 GEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSW 545

Query: 833 -------------DL-------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                        DL       IF  + GL+K++K  GY P+T FVL D++EE+K  +LY
Sbjct: 546 VDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLY 605

Query: 873 YHSEKLARAYGLISTPPSSV----------------------ILSNKEPLY--ANRFHHL 908
           YHSEKLA AY L  T   +                       +L+ ++ +   + RFHH 
Sbjct: 606 YHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHF 665

Query: 909 RDGMCPCAD 917
           + G+C C D
Sbjct: 666 KGGLCSCKD 674



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 181/356 (50%), Gaps = 3/356 (0%)

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S L A S+  + L   + +H + IK+   + SF+   LID Y + GS+AEA  LF+    
Sbjct: 5   SSLIAQSAHTKSLTTLRAVHTNVIKSG-FSYSFLGHKLIDGYIKCGSLAEARKLFDELPS 63

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
             + TWN+MI  +I    S +A+E + +M   G   D  T +   KA   L +++ G++ 
Sbjct: 64  RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRA 123

Query: 515 HAYAMKSGFE-LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           H  A+  G E LD  V+S ++DMY K   M DA  +F  +   D V +T +I G   +G 
Sbjct: 124 HGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGL 183

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
           +  AL I+  M   GV P+E+T A ++     L  L  G+ IH  ++K    S      S
Sbjct: 184 DGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTS 243

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+ MY++C  IED+  +F Q+D  N V W + +VGL Q+G  E  + +F +M    + P+
Sbjct: 244 LLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPN 303

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             T   +L ACS   ++ E  E  H +  K G++      + L++  G+ G   +A
Sbjct: 304 PFTLSSILQACSSLAML-EVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 245/552 (44%), Gaps = 98/552 (17%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++  +  T  L   ++ H  ++ S      FL + L+  Y +CGSL  AR+LFD++P R
Sbjct: 6   SLIAQSAHTKSLTTLRAVHTNVIKSG-FSYSFLGHKLIDGYIKCGSLAEARKLFDELPSR 64

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            +++WNS+++++   G+       E    + ++          T + + K     G +  
Sbjct: 65  HIVTWNSMISSHISHGKSK-----EAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRH 119

Query: 178 SETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
            +  HG A+ +GL V D FV+ ALV++Y+KF K+R+A  +F  + E+DVVL+  ++  YA
Sbjct: 120 GQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYA 179

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-------------KRHEEQVQA 283
           ++G   E   +F D+   G+ P++ ++ C+L    +LG             K   E V A
Sbjct: 180 QHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVA 239

Query: 284 YAIKLL--------------LYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
               LL              ++N  + +N V W   + G +Q G    A+  F  MIR +
Sbjct: 240 SQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCS 299

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           +  +  T    L A +    L +G+QIH  T+K G       G +LIN+Y K    CG  
Sbjct: 300 ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGK----CGNM 355

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
               ++  VL                        T  D     ++I  Y +NG       
Sbjct: 356 DKARSVFDVL------------------------TELDVVAINSMIYAYAQNG------- 384

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                            FG       H+ALELF  +   G   + +T  + + AC    +
Sbjct: 385 -----------------FG-------HEALELFERLKNMGLVPNGVTFISILLACNNAGL 420

Query: 508 LKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +++G Q+ A ++++   ++L +   + ++D+  +   + +A  +  ++  PD V W T++
Sbjct: 421 VEEGCQIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLL 479

Query: 566 SGCVDNGEEDLA 577
           + C  +GE ++A
Sbjct: 480 NSCKIHGEVEMA 491



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 44/338 (13%)

Query: 47  FSSSSSSSQWFSILRHAISTSDLLLGKSTHA-RILNSSQIPDRFLTNNLMTMYSRCGSLV 105
           FS+ S +     ++RH         G+  H   ++   ++ D F+ + L+ MY++   + 
Sbjct: 104 FSAISKAFSQLGLIRH---------GQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMR 154

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL 165
            A  +F ++ ++D++ + +++  YA  G        E  ++F  +       +  TLA +
Sbjct: 155 DAHLVFRRVLEKDVVLFTALIVGYAQHGLDG-----EALKIFEDMVNRGVKPNEYTLACI 209

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L  C + G +   + +HG  +K GL        +L+ +YS+   I ++  +F+ +   + 
Sbjct: 210 LINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQ 269

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAY 284
           V W   +    +NG  E    +F ++ R  + P+  ++  +L   S L      EQ+ A 
Sbjct: 270 VTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAI 329

Query: 285 AIKLLLYNNNS----------------------------NVVLWNKKLSGYLQVGDNHGA 316
            +KL L  N                              +VV  N  +  Y Q G  H A
Sbjct: 330 TMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEA 389

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +E F  +    +  + VTF+  L A      +  G QI
Sbjct: 390 LELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQI 427



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+   S + L +G+  HA  +      +++    L+ +Y +CG++  AR +FD + + 
Sbjct: 309 SILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTEL 368

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+++ NS++ AYA +G G+     E   LF  L+      + +T   +L  C ++G V  
Sbjct: 369 DVVAINSMIYAYAQNGFGH-----EALELFERLKNMGLVPNGVTFISILLACNNAGLV-- 421

Query: 178 SETVHGYAL-----KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            E    +A       I L  D F    ++++  +  ++ EA  L + ++  DVVLW+ +L
Sbjct: 422 EEGCQIFASIRNNHNIELTIDHFT--CMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLL 479

Query: 233 ---RAYAENGFGEEVFHLFVDL 251
              + + E    E+V    ++L
Sbjct: 480 NSCKIHGEVEMAEKVMSKILEL 501


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 227/743 (30%), Positives = 368/743 (49%), Gaps = 129/743 (17%)

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           V L N  L+ Y++ G +  A   F  M +++   ++++     L+A A   NL+  +++ 
Sbjct: 48  VFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTI-----LSAHAKAGNLDSARRVF 102

Query: 356 GTTLK--SGFYSAVIVG-------NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
               +  S  ++ +IVG        S ++ + +M    G+   QFT  +VL AS +  + 
Sbjct: 103 DEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM-VSSGISPTQFTFTNVL-ASCAAAQA 160

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN---KDG--------- 454
           L + K++H   +K        V+ +L+++Y + G    A+ +F+    KD          
Sbjct: 161 LDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISM 220

Query: 455 ------FDLA-------------TWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEIT 494
                 FDLA             +WN++I GY       +ALE FS M  +S  + D+ T
Sbjct: 221 HMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFT 280

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM----------- 543
           + + + AC     LK GKQ+HA+ +++  ++   V + ++ MY K GA+           
Sbjct: 281 LGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITG 340

Query: 544 ---------------------VD-AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
                                +D A++IF+ +   D VAWT MI G   NG    AL ++
Sbjct: 341 TPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLF 400

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
             M   G  P+ +T A ++   S L +L+ G+Q+HA  I+L+  S   VG +L+ MY++ 
Sbjct: 401 RLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRS 460

Query: 642 GNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           G+I+DA  +F  +   R+T+ W +M++ LAQHG G E ++LFE M    ++PD +T++GV
Sbjct: 461 GSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGV 520

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           LSAC++ GLV +    F+LM+  + IEP   HY+ ++D LGRAG  +EA   I +MP E 
Sbjct: 521 LSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEP 580

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
                 +LL +CRV    +  K  AEKL+ ++P +S AY+ L+N  +A  +W+D    R 
Sbjct: 581 DVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRK 640

Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
            MK K VKK+                         D I+  +  + K IK+ G++PDT+ 
Sbjct: 641 SMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNS 700

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSN 896
           VL D+E+E KE+ L +HSEKLA A+ LI+TP  + +                     L  
Sbjct: 701 VLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVE 760

Query: 897 KEPLY--ANRFHHLRDGMCPCAD 917
           +E +   A RFHH +DG C C D
Sbjct: 761 REIIVRDATRFHHFKDGSCSCQD 783



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 36/251 (14%)

Query: 511 GKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGAMVD------------------------ 545
           G+ +HA  +K G   L + +++ +L++YVK G+  D                        
Sbjct: 31  GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90

Query: 546 -------AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
                  A+ +F++IP PD V+WTTMI G    G    A+  + +M  SG+ P +FTF  
Sbjct: 91  KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ + +   AL+ G+++H+ ++KL  S    V  SL++MYAKCG+   A ++F +M +++
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
           T  WN M+    Q    +  L LF+ M     +PD V++  +++   + G    A E F 
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWNSIITGYCHQGYDIRALETFS 266

Query: 719 LMREKYGIEPE 729
            M +   ++P+
Sbjct: 267 FMLKSSSLKPD 277



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 175/442 (39%), Gaps = 105/442 (23%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y +L  F  ++  FL+      S +   + ++L    +   L +GK  H+ ++   Q   
Sbjct: 120 YNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGV 179

Query: 88  RFLTNNLMTMYSRCGSLVYAR-------------------------------RLFDKMPD 116
             + N+L+ MY++CG  V A+                                LFD+M D
Sbjct: 180 VPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTD 239

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            D++SWNSI+  Y H  +G      E F     L+ S     + TL  +L  C +   + 
Sbjct: 240 PDIVSWNSIITGYCH--QGYDIRALETFSFM--LKSSSLKPDKFTLGSVLSACANRESLK 295

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSK------------------------------ 206
             + +H + ++  +     V  AL+++Y+K                              
Sbjct: 296 LGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDG 355

Query: 207 ---FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
               G I  A+ +FD ++ RDVV W  M+  YA+NG   +   LF  + R G  P++ ++
Sbjct: 356 YFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTL 415

Query: 264 QCVLGVISDLGK-RHEEQVQAYAIKL-------------LLYNNNSNV------------ 297
             VL VIS L    H +Q+ A AI+L              +Y+ + ++            
Sbjct: 416 AAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICS 475

Query: 298 ----VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTD 346
               + W   +    Q G  + AIE F  M+R N++ D +T++  L+A         G  
Sbjct: 476 YRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS 535

Query: 347 NLNLGQQIHGTTLKSGFYSAVI 368
             NL + +H     S  Y+ +I
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMI 557



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 12/166 (7%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAYA 130
           GK  HA  +   ++    + N L+TMYSR GS+  AR++F+ +   RD ++W S++ + A
Sbjct: 431 GKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLA 490

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G GN     E   LF  +         +T   +L  C   G V   ++       +  
Sbjct: 491 QHGLGN-----EAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHN 545

Query: 191 VWDEFVS---GALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML 232
           +  E  S     ++++  + G + EA  F+ +   E DVV W  +L
Sbjct: 546 I--EPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 195/586 (33%), Positives = 314/586 (53%), Gaps = 58/586 (9%)

Query: 387 RTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           + +++   +VL A   S  + EG+    Q H    K   V   FV ++L+ +Y +   + 
Sbjct: 118 QPNEYVFTTVLSACAHSGRVFEGM----QCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173

Query: 444 EAEYLFENKDGF-----DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            A  + E++ G      D   +N+++   + S    +A+E+   M   G   D +T  + 
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           +  CG +  L  G Q+HA  +K G   D+ V S ++DM+ KCG ++ A+ +F+ +   + 
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V WT++++  + NGE +  L++   M   G + +EFTFA+L+ A + + AL  G  +HA 
Sbjct: 294 VVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHAR 353

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           + KL   +   VG +L++MY+KCG I+ +Y +F  M  R+ + WNAM+ G +QHG G++ 
Sbjct: 354 VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQA 413

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L LF+DM + G  P+ VTF+GVLSAC++  LV+E +   + + + + +EP +EHY+ +V 
Sbjct: 414 LLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVA 473

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            L RAG  +EA   + +   +      R LL AC +  +   G  +AE ++ ++P D   
Sbjct: 474 VLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGT 533

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLI 835
           Y LLSN++A A  WD VT  R  M+ +NVKK+P                          I
Sbjct: 534 YTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQI 593

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSV 892
           + KV+ L++ IK+ GYVP+ + VL DVE+E+KE  L YHSEKLA AYGL+  P   P  V
Sbjct: 594 YNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRV 653

Query: 893 I------------------LSNKEPLY--ANRFHHLRDGMCPCADN 918
           I                  ++N+  +   A+RFHH RDG C C D+
Sbjct: 654 IKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDH 699



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 227/555 (40%), Gaps = 122/555 (21%)

Query: 65  STSDLLLGKSTHARILNSSQIPDR--------FLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +T +L  GKS H ++L  +Q               N+L+ +Y +C  L  AR LFD+M  
Sbjct: 24  NTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSL 83

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R ++S+N ++  Y HSGE       E  +LF+++  S+   +      +L  C  SG V+
Sbjct: 84  RSVVSYNVLMGGYLHSGEH-----LEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVF 138

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-----ERDVVLWKVM 231
                HG+  K GLV+  FV  +LV++YSK   +  A  + +        + D   +  +
Sbjct: 139 EGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSV 198

Query: 232 LRAYAENG-FGE--EVFHLFVDLHRSGLCPDDESVQCVLGV---ISDLG---KRHEEQVQ 282
           L A  E+G  GE  EV    VD    G+  D  +   V+G+   I DLG   + H + ++
Sbjct: 199 LNALVESGRLGEAVEVLGRMVD---EGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLK 255

Query: 283 A-----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                    A K+     N NVV+W   ++ YLQ G+    +  
Sbjct: 256 GGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNL 315

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
              M R     +  TF V L A AG   L  G  +H    K G  + VIVGN+LINMYSK
Sbjct: 316 LSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSK 375

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
            GC+                                     D+  D F            
Sbjct: 376 CGCI-------------------------------------DSSYDVF------------ 386

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
                  +   N+D   + TWNAMI GY       +AL LF  M ++GE  + +T    +
Sbjct: 387 -------FDMRNRD---IITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVL 436

Query: 500 KACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            AC  L ++ +G     + M  + ++ G E   CV +    +  + G + +A++      
Sbjct: 437 SACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVA----VLCRAGMLEEAENFMRTTQ 492

Query: 555 AP-DDVAWTTMISGC 568
              D VAW  +++ C
Sbjct: 493 VKWDVVAWRVLLNAC 507



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 162/333 (48%), Gaps = 8/333 (2%)

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
            +LI++Y +   +  A YLF+      + ++N ++ GY+ S    + ++LF +M +S  +
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG----AMVD 545
            +E    T + AC     + +G Q H +  K G      V S ++ MY KC     A+  
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178

Query: 546 AQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            +S   +I   +D   + ++++  V++G    A+ +  +M   GVV D  T+  ++    
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            +  L  G Q+HA L+K   + D FVG  LVDM+ KCG++  A  +F  +  RN V+W +
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN-FHLMREK 723
           ++    Q+G  EETL L   M   G   +  TF  +L+A  + G+ +  + +  H   EK
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNA--FAGMAALRHGDLLHARVEK 356

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            GI+  V   + L++   + G    + ++   M
Sbjct: 357 LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDM 389



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 32/338 (9%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + S++       DL LG   HA++L      D F+ + L+ M+ +CG ++ AR++FD
Sbjct: 227 SVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFD 286

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            + +R+++ W S++ AY  +GE       E   L   +    T ++  T A LL      
Sbjct: 287 GLQNRNVVVWTSLMTAYLQNGE-----FEETLNLLSCMDREGTMSNEFTFAVLLNAFAGM 341

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   + +H    K+G+     V  AL+N+YSK G I  +  +F  M+ RD++ W  M+
Sbjct: 342 AALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMI 401

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------EQVQAYAI 286
             Y+++G G++   LF D+  +G CP+  +   VL   + L   +E      + ++ + +
Sbjct: 402 CGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKV 461

Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           +  L +    V +  +  +G L+  +N         M  + V++D V + V L A     
Sbjct: 462 EPGLEHYTCVVAVLCR--AGMLEEAENF--------MRTTQVKWDVVAWRVLLNACNIHR 511

Query: 347 NLNLGQQIHGTTLK-----SGFYSAVIVGNSLINMYSK 379
           N NLG +I  T L+      G Y+       L NMY+K
Sbjct: 512 NYNLGTKIAETILQMDPRDMGTYTL------LSNMYAK 543



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 11/245 (4%)

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           LL+  Q    H+Y      E ++   + ++++YVKC  +  A+ +F+++     V++  +
Sbjct: 38  LLIRNQSSTHHSYR-----EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVL 92

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           + G + +GE    + ++  M  S   P+E+ F  ++ A +    + +G Q H  L K   
Sbjct: 93  MGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGL 152

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFK----QMDMRNTVL-WNAMLVGLAQHGNGEETL 679
               FV  SLV MY+KC +++ A  + +     +D  N    +N++L  L + G   E +
Sbjct: 153 VFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAV 212

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           ++   M   GV  DSVT++ V+  C     +    +  H    K G+  +V   S LVD 
Sbjct: 213 EVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQ-VHAQLLKGGLTFDVFVGSMLVDM 271

Query: 740 LGRAG 744
            G+ G
Sbjct: 272 FGKCG 276



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 50/258 (19%)

Query: 609 LEQGRQIHANLIKLDCSSD-----PFVGI---SLVDMYAKCGNIEDAYILFKQMDMRNTV 660
           L  G+ IH  L+  + SS       F  I   SL+++Y KC  +  A  LF +M +R+ V
Sbjct: 28  LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA------- 713
            +N ++ G    G   E +KLF++M +   +P+   F  VLSAC+++G V E        
Sbjct: 88  SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFL 147

Query: 714 ------YENF------HLMREKYGIE-----PEVEH-----------YSFLVDALGRAGR 745
                 + +F      H+  + + ++      E EH           Y+ +++AL  +GR
Sbjct: 148 FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGR 207

Query: 746 TKEAGELILSMPFEA---SASMHRALLGACRVQGDTETGKWV-AEKLMALEPFDSSAYVL 801
             EA E++  M  E     +  + +++G C    D   G  V A+ L     FD     +
Sbjct: 208 LGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSM 267

Query: 802 LSNIFAAANQWDDVTSAR 819
           L ++F       DV SAR
Sbjct: 268 LVDMFGKCG---DVLSAR 282


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/541 (35%), Positives = 286/541 (52%), Gaps = 46/541 (8%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V D     A++  Y  NG + E   LFE     D+ +W +MI G  L+  S +AL +F  
Sbjct: 133 VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKK 192

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M  SG      T A  + AC   +    G Q+H + +K G      +S  ++  Y  C  
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK 252

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +  A  IFN+    + V WT +++  V N +   AL ++  M   G +P++ TF+I +KA
Sbjct: 253 IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
              L AL++G++IH   IKL   +D FVG SLV MY +CGN+  A  +F+ ++ ++ V W
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSW 372

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           N+++VG AQHG G   L  F  M   GV+P+ +TF G+LSACS +G++ +    F  +  
Sbjct: 373 NSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR 432

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
                   +HY+ +VD LGR G+  EA EL+  MP +A++ +  ALL ACRV  + E  +
Sbjct: 433 YKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAE 492

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------- 831
             A+ ++ LEP  SSAYVLLSNI+A+A +W DV+  R +MK+  + K P           
Sbjct: 493 RAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKK 552

Query: 832 ------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
                       ++ I+ K++ L K++KE GYVPD  F L DVE+E+KE  L +HSE+LA
Sbjct: 553 HEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLA 612

Query: 880 RAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
            A+GL+ST   S I   K                           + RFHH ++G+C C+
Sbjct: 613 IAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCS 672

Query: 917 D 917
           D
Sbjct: 673 D 673



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 240/575 (41%), Gaps = 121/575 (21%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF--RSLRESITFTSRLTLAP 164
           AR +FDK+P  +L  +  ++A Y  +     + + +  +LF   S+R+ +++ S      
Sbjct: 31  ARLIFDKIPSPNLHLYTKMIAGYTRN-----DRLCDALKLFDRMSVRDVVSWNS------ 79

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           ++K CL  G              +G+                      A  LFD M E++
Sbjct: 80  MIKGCLDCG-------------NLGM----------------------ATRLFDEMPEKN 104

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           V+ W  M+  Y + G  E    LF+D+H                                
Sbjct: 105 VISWTTMVNGYLKFGRVELAQRLFLDMHVK------------------------------ 134

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVA 343
                      +V  WN  + GY + G     +  F  M +R  + + S+        + 
Sbjct: 135 -----------DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSM--------IG 175

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
           G D       ++G + ++ F            ++ KM    G+     T A VL A ++ 
Sbjct: 176 GLD-------LNGKSEEALF------------VFKKM-LRSGVEPTWSTFACVLSACANA 215

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            E  +L  Q+H H +K       F+S +LI  Y     +  A  +F      ++  W A+
Sbjct: 216 VE-FNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTAL 274

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           +  Y+ +N    AL +F  M   G   ++ T +  +KAC  L  L +GK++H  A+K G 
Sbjct: 275 LTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGL 334

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E D+ V + ++ MY +CG +  A ++F +I   D V+W ++I G   +G    AL  ++Q
Sbjct: 335 ETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQ 394

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS-DPFVGISLVDMYAKCG 642
           M   GV P+E TF  L+ A S    L +GR     + +   +   P     +VD+  +CG
Sbjct: 395 MIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCG 454

Query: 643 NIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            +++A  L + M ++ N+++W A+L     H N E
Sbjct: 455 KLDEAEELVRYMPVKANSMIWLALLSACRVHSNLE 489



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 11/302 (3%)

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           T +I  Y RN  + +A  LF+     D+ +WN+MI G +   N   A  LF  M      
Sbjct: 47  TKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK--- 103

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQS 548
            + I+  T V        LK G+   A  +     + D+   + ++  Y + G + +   
Sbjct: 104 -NVISWTTMVNG-----YLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVR 157

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F ++P  D ++WT+MI G   NG+ + AL ++ +M  SGV P   TFA ++ A +    
Sbjct: 158 LFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVE 217

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
              G Q+H +++KL C    F+ +SL+  YA C  IE A+ +F +   +N V W A+L  
Sbjct: 218 FNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTA 277

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              +   ++ L++F DM   G  P+  TF   L AC     + +  E  H M  K G+E 
Sbjct: 278 YVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKE-IHTMAIKLGLET 336

Query: 729 EV 730
           +V
Sbjct: 337 DV 338



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 56/334 (16%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P+  L   ++  Y+R   L  A +LFD+M  RD++SWNS++      G     N+    R
Sbjct: 41  PNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCG-----NLGMATR 95

Query: 146 LFRSLRES--ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVN 202
           LF  + E   I++T+           + +GY+          L + + V D     A+V+
Sbjct: 96  LFDEMPEKNVISWTT-----------MVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVH 144

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
            Y + G++ E   LF+ M  RDV+ W  M+     NG  EE   +F  + RSG+ P   +
Sbjct: 145 GYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWST 204

Query: 263 VQCVLGVIS-----DLGKRHEEQVQAYAIKL-------------LLYNN----------- 293
             CVL   +     +LG     QV  + +KL               Y N           
Sbjct: 205 FACVLSACANAVEFNLG----VQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 NVV W   L+ Y+    +  A+  F +M +     +  TF + L A  G + L+
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            G++IH   +K G  + V VGNSL+ MY++ G V
Sbjct: 321 KGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNV 354



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 155/378 (41%), Gaps = 92/378 (24%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR------CGSLVYARRLFDKMPDRDLI 120
           + ++ G + + R+ ++ ++ DR    ++++  S       CG+L  A RLFD+MP++++I
Sbjct: 47  TKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVI 106

Query: 121 SWNSILAAYAHSGE------------------------GNAEN--VTEGFRLFRSL--RE 152
           SW +++  Y   G                         G  EN  V EG RLF  +  R+
Sbjct: 107 SWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRD 166

Query: 153 SITFTSRL-----------------------------TLAPLLKLCLSSGYVWASETVHG 183
            I++TS +                             T A +L  C ++        VHG
Sbjct: 167 VISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHG 226

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           + +K+G  + EF+S +L+  Y+   KI  A  +F+    ++VV W  +L AY  N   ++
Sbjct: 227 HVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQD 286

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKL-------------L 289
              +F D+ + G  P+  +    L     L    + +++   AIKL             +
Sbjct: 287 ALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVV 346

Query: 290 LYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y                N  ++V WN  + G  Q G    A+  F  MIR  V  + +T
Sbjct: 347 MYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEIT 406

Query: 335 FLVALAAVAGTDNLNLGQ 352
           F   L+A + +  L  G+
Sbjct: 407 FTGLLSACSRSGMLLKGR 424



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 44/207 (21%)

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y +   + DA  +F+ +   D V+W +MI GC+D G   +A  ++ +M      P++   
Sbjct: 53  YTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEM------PEK--- 103

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
                                N+I            ++V+ Y K G +E A  LF  M +
Sbjct: 104 ---------------------NVISW---------TTMVNGYLKFGRVELAQRLFLDMHV 133

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           ++   WNAM+ G  ++G  EE ++LFE+M       D +++  ++      G   EA   
Sbjct: 134 KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVR----DVISWTSMIGGLDLNGKSEEALFV 189

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRA 743
           F  M  + G+EP    ++ ++ A   A
Sbjct: 190 FKKML-RSGVEPTWSTFACVLSACANA 215


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 238/769 (30%), Positives = 355/769 (46%), Gaps = 139/769 (18%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           A+++ Y +  K   A+ LFD M ERD+  W VML  Y  N                    
Sbjct: 85  AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRN-------------------- 124

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
                 C LG                A +L       +VV WN  LSGY Q G    A E
Sbjct: 125 ------CRLGD---------------ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F NM   N    S+++   LAA            +H   ++      +    S  ++ S
Sbjct: 164 VFDNMPEKN----SISWNGLLAAY-----------VHNGRIEEA--CLLFESKSDWDLIS 206

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
              C+ G    +  L         +P                  V D+     +I  Y +
Sbjct: 207 -WNCLMGGFVRKKKLGDARWLFDKMP------------------VRDAISWNTMISGYAQ 247

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G +++A  LF+     D+ TW AM+ GY+ +    +A   F  M    E      IA  
Sbjct: 248 GGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGY 307

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLC--VSS--GILDMYVKCGAMVDAQSIFNDIP 554
           V          Q K+M     +  FE   C  +SS   ++  Y + G +  A+  F+ +P
Sbjct: 308 V----------QTKKMDI--ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMP 355

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V+W  +I+G   +G  + AL+++ +++  G   +  TF   +   + + ALE G+Q
Sbjct: 356 QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH   +K+   +  FVG +L+ MY KCG+I++A   F+ ++ ++ V WN ML G A+HG 
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G + L +FE MK  GV+PD +T +GVLSACS+TGL+    E F+ M + YG+ P  +HY+
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYT 535

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            ++D LGRAGR +EA +LI +MPF+  A+   ALLGA R+ G+TE G+  AE +  +EP 
Sbjct: 536 CMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 595

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +S  YVLLSN++AA+ +W D    R +M+   V+K P                       
Sbjct: 596 NSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPE 655

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            + I+A +E L  +++E GYV  T  VL DVEEEEKE  L YHSEKLA A+G+++ P   
Sbjct: 656 KERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGR 715

Query: 892 VILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            I   K                           ++RFHH  +G C C D
Sbjct: 716 PIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGD 764



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 235/535 (43%), Gaps = 98/535 (18%)

Query: 84  QIPDR--FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P+R  F  N ++T Y R   L  ARRLFD MP++D++SWNS+L+ YA +G      V 
Sbjct: 105 QMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY-----VD 159

Query: 142 EGFRLFRSLRE--SITFTS---------RLTLAPLL-----------KLCLSSGYV---- 175
           E   +F ++ E  SI++           R+  A LL             CL  G+V    
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 176 -----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                W  + +    ++  + W+  +SG     Y++ G + +A+ LFD    RDV  W  
Sbjct: 220 LGDARWLFDKM---PVRDAISWNTMISG-----YAQGGGLSQARRLFDESPTRDVFTWTA 271

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ---CVLGVISDLGKRHEEQVQAYAIK 287
           M+  Y +NG  +E    F ++      P+   V     + G +         Q +   I 
Sbjct: 272 MVSGYVQNGMLDEAKTFFDEM------PEKNEVSYNAMIAGYV---------QTKKMDIA 316

Query: 288 LLLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
             L+ +    N+  WN  ++GY Q+GD   A + F  M     Q D V++   +A  A  
Sbjct: 317 RELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM----PQRDCVSWAAIIAGYA-- 370

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
                         +SG Y   +      NM+ ++    G   ++ T    L   + +  
Sbjct: 371 --------------QSGHYEEAL------NMFVEIK-QDGESLNRATFGCALSTCADIA- 408

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L L KQIH  A+K       FV  AL+ +Y + GS+ EA   FE  +  D+ +WN M+ 
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           GY       +AL +F  M T+G + DEIT+   + AC    +L +G + + Y+M   + +
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE-YFYSMTKDYGV 527

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
                  + ++D+  + G + +AQ +  ++P  P   +W  ++     +G  +L 
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 42/304 (13%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           + +   + D    N +++ Y++ G L  ARRLFD+ P RD+ +W ++++ Y  +G     
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGM---- 281

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
            + E    F  + E    +    +A  ++   +     A E       +    W+  ++G
Sbjct: 282 -LDEAKTFFDEMPEKNEVSYNAMIAGYVQ---TKKMDIARELFESMPCRNISSWNTMITG 337

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
                Y + G I +A+  FD M +RD V W  ++  YA++G  EE  ++FV++ + G   
Sbjct: 338 -----YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESL 392

Query: 259 DDESVQCVLGVISD-----LGKR-HEEQVQ-AYAIKLLLYN------------------- 292
           +  +  C L   +D     LGK+ H + V+  Y     + N                   
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452

Query: 293 ---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 +VV WN  L+GY + G    A+  F +M  + V+ D +T +  L+A + T  L+
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLD 512

Query: 350 LGQQ 353
            G +
Sbjct: 513 RGTE 516



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 138/341 (40%), Gaps = 62/341 (18%)

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I  + RNG    A ++F         ++NAMI GY+ ++  + A  LF  M         
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP-------- 107

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
                                          E DL   + +L  YV+   + DA+ +F+ 
Sbjct: 108 -------------------------------ERDLFSWNVMLTGYVRNCRLGDARRLFDL 136

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  D V+W +++SG   NG  D A  ++  M      P++ +    +  +  L A    
Sbjct: 137 MPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM------PEKNS----ISWNGLLAAYVHN 186

Query: 613 RQIHANLIKLDCSSDPFVGIS---LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
            +I    +  +  SD  + IS   L+  + +   + DA  LF +M +R+ + WN M+ G 
Sbjct: 187 GRIEEACLLFESKSDWDL-ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQ G   +  +LF++        D  T+  ++S     G++ EA   F  M EK  +   
Sbjct: 246 AQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS-- 299

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              Y+ ++    +  +   A EL  SMP    +S +  + G
Sbjct: 300 ---YNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITG 337



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H + +        F+ N L+ MY +CGS+  A   F+ + ++D++SWN++LA 
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAG 469

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALK 187
           YA  G G      +   +F S++ +      +T+  +L  C  +G +   +E  +     
Sbjct: 470 YARHGFGR-----QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKD 524

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEE 243
            G++        ++++  + G++ EA+ L   M  +     W  +L   R +     GE+
Sbjct: 525 YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEK 584



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQ 611
           +  PD + W   IS  + NG  D AL +++ M R S V  +      L  +   L     
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLA---- 99

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
                 NL       D F    ++  Y +   + DA  LF  M  ++ V WN++L G AQ
Sbjct: 100 -----RNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           +G  +E  ++F++M     E +S+++ G+L+A  + G + EA
Sbjct: 155 NGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEA 192


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 194/583 (33%), Positives = 296/583 (50%), Gaps = 81/583 (13%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           QIH    ++       ++  L   Y   G +  +  LF       +  W A+I G+ L  
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +AL  ++ M T G   +  T ++ +K C     ++ GK +H+ A+K GF+ DL V +
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP-------------------------------DDVA 560
           G+LD+Y + G +V AQ +F+ +P                                 D V 
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  MI G   NG  + AL ++ +M  +   P+E T   ++ A   L ALE GR +H+ + 
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
                 +  VG +LVDMY+KCG++EDA ++F ++D ++ V WN+M+VG A HG  +E L+
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343

Query: 681 LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           LF+ M   G+ P ++TFIG+LSAC ++G V+E ++ F+ M+++YGIEP++EHY  +V+ L
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 403

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
           GRAG  ++A EL+ +M  E    +   LLGACR+ G    G+ + E L+     +S  Y+
Sbjct: 404 GRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 463

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFA 837
           LLSNI+AA   WD V   R  MK   VKK+P                          I+ 
Sbjct: 464 LLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYM 523

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---- 893
            +E +   +K  GY P TD VL D+ E EKER+L  HSEKLA A+GLI+T P + I    
Sbjct: 524 MLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVK 583

Query: 894 -----------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                            ++ ++ +    NRFHH  +G C C D
Sbjct: 584 NLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGD 626



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 196/408 (48%), Gaps = 41/408 (10%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           Y++ L     N +V  W   + G+   G +  A+  +  M+   V+ ++ TF    +++ 
Sbjct: 80  YSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF----SSIL 135

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               +  G+ +H   +K GF S + V   L+++Y++ G V           S  +   ++
Sbjct: 136 KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDV----------VSAQQLFDTM 185

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           PE                    S VS TA++  Y ++G +  A  LF+  +  D   WN 
Sbjct: 186 PE-------------------KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 226

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY  +   ++AL LF  M  +  + +E+T+ + + ACG L  L+ G+ +H+Y   +G
Sbjct: 227 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 286

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            + ++ V + ++DMY KCG++ DA+ +F+ I   D VAW +MI G   +G    AL ++ 
Sbjct: 287 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 346

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAK 640
            M   G+ P   TF  ++ A      + +G  I  N +K +   +P +     +V++  +
Sbjct: 347 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF-NKMKDEYGIEPKIEHYGCMVNLLGR 405

Query: 641 CGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFED 684
            G++E AY L K M++  + VLW  +L     HG    GE+ ++L  D
Sbjct: 406 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVD 453



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 29/229 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK+ H++ +      D ++   L+ +Y+R G +V A++LFD MP++ L+S  ++L  YA 
Sbjct: 143 GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAK 202

Query: 132 SGEGNAENV--------------------------TEGFRLFRSLRESITFTSRLTLAPL 165
            GE +A  V                           E   LFR + ++    + +T+  +
Sbjct: 203 HGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSV 262

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L  C   G + +   VH Y    G+ ++  V  ALV++YSK G + +A+ +FD + ++DV
Sbjct: 263 LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDV 322

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           V W  M+  YA +GF +E   LF  + R GL P + +    +G++S  G
Sbjct: 323 VAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT---FIGILSACG 368



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 38/242 (15%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T   +P+ +L L   + K+   +  +     S+L        L  G+  H+ I N+    
Sbjct: 232 TQNGMPNEALVLFRRMLKA--KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF 289

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           +  +   L+ MYS+CGSL  AR +FDK+ D+D+++WNS++  YA  G        E  +L
Sbjct: 290 NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQ-----EALQL 344

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS--------- 197
           F+S+       + +T   +L  C  SG  W +E            WD F           
Sbjct: 345 FKSMCRMGLHPTNITFIGILSACGHSG--WVTEG-----------WDIFNKMKDEYGIEP 391

Query: 198 -----GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEEVFHLF 248
                G +VN+  + G + +A  L   M  E D VLW  +L   R + +   GE++  L 
Sbjct: 392 KIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL 451

Query: 249 VD 250
           VD
Sbjct: 452 VD 453



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 8/169 (4%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            A+L+  S  ++ L    QIHA L +      P +   L   YA  G ++ +  LF +  
Sbjct: 33  LAVLIDKSKTISHL---LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQ 89

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             +   W A++ G A  G  E+ L  +  M   GVEP++ TF  +L  C       E  +
Sbjct: 90  NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPI-----EPGK 144

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
             H    K G + ++   + L+D   R G    A +L  +MP ++  S+
Sbjct: 145 ALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSL 193


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/581 (33%), Positives = 291/581 (50%), Gaps = 49/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  + FT     +A +SL   +   KQIH  A+K   + D FV  +  D+YC+     +
Sbjct: 53  GVVPNDFTFPCAFKAVASLRLPV-TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 111

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     +L TWNA I   +      +A+E F          + IT    + AC  
Sbjct: 112 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 171

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            L L  G Q+H   ++SGF+ D+ V +G++D Y KC  +  ++ IF ++   + V+W ++
Sbjct: 172 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 231

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ++  V N E++ A  +Y + R   V   +F  + ++ A + +  LE GR IHA+ +K   
Sbjct: 232 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 291

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
               FVG +LVDMY KCG IED+   F +M  +N V  N+++ G A  G  +  L LFE+
Sbjct: 292 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 351

Query: 685 MKAHGV--EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           M   G    P+ +TF+ +LSACS  G V    + F  MR  YGIEP  EHYS +VD LGR
Sbjct: 352 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 411

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  + A E I  MP + + S+  AL  ACR+ G  + G   AE L  L+P DS  +VLL
Sbjct: 412 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 471

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVK-------------------KDPADLIFAKVEGLI 843
           SN FAAA +W +  + R E+K   +K                   KD + ++  +++  +
Sbjct: 472 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 531

Query: 844 KRIKE----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEP 899
            +++      GY PD    L D+EEEEK   + +HSEKLA A+GL+S P S  I   K  
Sbjct: 532 AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 591

Query: 900 LYA-----------------------NRFHHLRDGMCPCAD 917
                                     NRFH  +DG+C C D
Sbjct: 592 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 632



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 8/359 (2%)

Query: 456 DLATWNAMIFGYILSNNSH--KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
           ++ +W ++I G  L+ N H   AL  F  M   G   ++ T   A KA   L +   GKQ
Sbjct: 22  NVVSWTSLISG--LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 79

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +HA A+K G  LD+ V     DMY K     DA+ +F++IP  +   W   IS  V +G 
Sbjct: 80  IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 139

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              A+  + + R     P+  TF   + A S    L  G Q+H  +++    +D  V   
Sbjct: 140 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 199

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+D Y KC  I  + I+F +M  +N V W +++    Q+   E+   L+   +   VE  
Sbjct: 200 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 259

Query: 694 SVTFIGVLSACS-YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
                 VLSAC+   GL  E   + H    K  +E  +   S LVD  G+ G  +++ + 
Sbjct: 260 DFMISSVLSACAGMAGL--ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 317

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
              MP E +     +L+G    QG  +    + E++       +  Y+   ++ +A ++
Sbjct: 318 FDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 2/220 (0%)

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY K      A+ +    PA + V+WT++ISG   NG    AL  + +MR  GVVP++FT
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F    KA + L     G+QIHA  +K     D FVG S  DMY K    +DA  LF ++ 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            RN   WNA +      G   E ++ F + +     P+S+TF   L+ACS   L      
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS-DWLHLNLGM 179

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
             H +  + G + +V   + L+D  G+  + + + E+I +
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS-EIIFT 218



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 126/319 (39%), Gaps = 40/319 (12%)

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MYS+      AR +    P R+++SW S+++  A +G  +   V      F  +R     
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVE-----FFEMRREGVV 55

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            +  T     K   S       + +H  A+K G + D FV  +  ++Y K     +A+ L
Sbjct: 56  PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 115

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS-------------GLCPD---- 259
           FD + ER++  W   +     +G   E    F++  R                C D    
Sbjct: 116 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 175

Query: 260 ---------------DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL 304
                          D  V    G+I   GK   +Q+++  I +       N V W   +
Sbjct: 176 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC--KQIRSSEI-IFTEMGTKNAVSWCSLV 232

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           + Y+Q  ++  A   ++   +  V+         L+A AG   L LG+ IH   +K+   
Sbjct: 233 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 292

Query: 365 SAVIVGNSLINMYSKMGCV 383
             + VG++L++MY K GC+
Sbjct: 293 RTIFVGSALVDMYGKCGCI 311



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG   H  +L S    D  + N L+  Y +C  +  +  +F +M  ++ +SW S++AA
Sbjct: 175 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 234

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  + E    +V     L+   R+ I  TS   ++ +L  C     +    ++H +A+K 
Sbjct: 235 YVQNHEDEKASV-----LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 289

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            +    FV  ALV++Y K G I +++  FD M E+++V    ++  YA  G  +    LF
Sbjct: 290 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 349

Query: 249 VDLHRSGLCP 258
            ++   G  P
Sbjct: 350 EEMAPRGCGP 359



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 29/278 (10%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL---------------LLGK 73
           RN+ S++  +    Q  HFS++    ++F + R  +  +D                + GK
Sbjct: 21  RNVVSWTSLISGLAQNGHFSTALV--EFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 78

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
             HA  +   +I D F+  +   MY +      AR+LFD++P+R+L +WN+ ++      
Sbjct: 79  QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV--T 136

Query: 134 EGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
           +G      E F  FR +     SITF +       L  C    ++     +HG  L+ G 
Sbjct: 137 DGRPREAIEAFIEFRRIDGHPNSITFCA------FLNACSDWLHLNLGMQLHGLVLRSGF 190

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  V   L++ Y K  +IR ++ +F  M  ++ V W  ++ AY +N   E+   L++ 
Sbjct: 191 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 250

Query: 251 LHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIK 287
             +  +   D  +  VL   + + G      + A+A+K
Sbjct: 251 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 288



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      + L LG+S HA  + +      F+ + L+ MY +CG +  + + FD+MP++
Sbjct: 265 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 324

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSGYV 175
           +L++ NS++  YAH G+     V     LF  +  R      + +T   LL  C  +G V
Sbjct: 325 NLVTRNSLIGGYAHQGQ-----VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 379


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 188/553 (33%), Positives = 301/553 (54%), Gaps = 47/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K++  + I +    D ++   ++ ++ + G M +A  LF+     ++ +WN +I G + +
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  +A  LF  M             T ++A   L ++  G+Q+H+ ++K+G   D+ V+
Sbjct: 211 GDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVA 270

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMY KCG++ DAQ +F+ +P    V W ++I+G   +G  + ALS+Y++MR SGV 
Sbjct: 271 CALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK 330

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D FTF+I+++  + L +LE  +Q HA L++     D     +LVD+Y+K G IEDA  +
Sbjct: 331 IDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHV 390

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  +N + WNA++ G   HG G E +++FE M   G+ P+ VTF+ VLSACSY+GL 
Sbjct: 391 FDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLS 450

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +E F  M   + I+P   HY+ +++ LGR G   EA  LI   PF+ + +M  ALL 
Sbjct: 451 DRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLT 510

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK----- 825
           ACRV  + E GK+ AEKL  + P   S YV+L NI+  + + ++  +    +KR+     
Sbjct: 511 ACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRML 570

Query: 826 ------NVKKDP------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
                  +KK P            +  I+ K++ L+  I + GYVP   F+L DV+E+E 
Sbjct: 571 PACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQE- 629

Query: 868 ERALYYHSEKLARAYGLISTP---PSSVILSN------------------KEPLY--ANR 904
           ER L YHSEKLA A+GLI+T    P  ++ S+                  +E +   A+R
Sbjct: 630 ERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASR 689

Query: 905 FHHLRDGMCPCAD 917
           FHH +DG C C D
Sbjct: 690 FHHFKDGSCSCGD 702



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 165/299 (55%), Gaps = 4/299 (1%)

Query: 474 HKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           H+ALELF  +  +G   +D  T    V AC  L  ++  K++  Y + SG + D  + + 
Sbjct: 112 HEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNR 171

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +L M+VKCG M+DA+ +F+++P  + ++W T+I G VD G+   A  ++  M        
Sbjct: 172 VLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAG 231

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
              F  +++AS+ L  +  GRQ+H+  +K     D FV  +L+DMY+KCG+IEDA  +F 
Sbjct: 232 SRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFD 291

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           QM  + TV WN+++ G A HG  EE L ++ +M+  GV+ D+ TF  ++  C+    +  
Sbjct: 292 QMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEH 351

Query: 713 AYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           A + +  L+R  +G+  ++   + LVD   + GR ++A  +   MP +   S +  + G
Sbjct: 352 AKQAHAGLVRHGFGL--DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 154/305 (50%), Gaps = 34/305 (11%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           ++NS   PD +L N ++ M+ +CG ++ ARRLFD+MP+++++SWN+I+     +G     
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG----- 211

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           +  E FRLF  + +  +         +++     G ++A   +H  +LK G+  D FV+ 
Sbjct: 212 DYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++YSK G I +A+ +FD M E+  V W  ++  YA +G+ EE   ++ ++  SG+  
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331

Query: 259 DDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNN----------- 293
           D+ +   ++ + + L    H +Q  A  ++             + LY+            
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + NV+ WN  ++GY   G    A+E F  M+   +  + VTFL  L+A + +   +
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSD 451

Query: 350 LGQQI 354
            G +I
Sbjct: 452 RGWEI 456



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 5/223 (2%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           S + S  + +++R +     +  G+  H+  L +    D F+   L+ MYS+CGS+  A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            +FD+MP++  + WNSI+A YA  G        E   ++  +R+S       T + ++++
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSE-----EALSMYYEMRDSGVKIDNFTFSIIIRI 342

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     +  ++  H   ++ G   D   + ALV++YSK+G+I +AK +FD M  ++V+ W
Sbjct: 343 CARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISW 402

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
             ++  Y  +G G E   +F  +   G+ P+  +   VL   S
Sbjct: 403 NALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 66/354 (18%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N++ WN  + G +  GD   A   F+ M +      S  F+  + A AG   +  G+Q+H
Sbjct: 196 NILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLH 255

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG------CV-------------------------- 383
             +LK+G    V V  +LI+MYSK G      CV                          
Sbjct: 256 SCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSE 315

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ D FT + ++R  + L    H +KQ H   +++    D   +TAL
Sbjct: 316 EALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEH-AKQAHAGLVRHGFGLDIVANTAL 374

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D+Y + G + +A+++F+     ++ +WNA+I GY       +A+E+F  M   G   + 
Sbjct: 375 VDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNH 434

Query: 493 ITIATAVKACGCLLMLKQG----------KQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           +T    + AC    +  +G           ++   AM     ++L    G+LD       
Sbjct: 435 VTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD------- 487

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
             +A ++  D P  P    W  +++ C     ++  L  +   +L G+ P++ +
Sbjct: 488 --EAFALIKDAPFKPTVNMWAALLTAC--RVHKNFELGKFAAEKLYGMGPEKLS 537



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 41/256 (16%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   L+  C+    +   + V  Y +  GL  DE++   ++ ++ K G + +A+ LFD M
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFV------------------------------- 249
            E++++ W  ++    + G   E F LF+                               
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 250 DLHRSGL---CPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LH   L      D  V C L  + S  G   + Q       +         V WN  ++
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC------VFDQMPEKTTVGWNSIIA 306

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY   G +  A+  +  M  S V+ D+ TF + +   A   +L   +Q H   ++ GF  
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366

Query: 366 AVIVGNSLINMYSKMG 381
            ++   +L+++YSK G
Sbjct: 367 DIVANTALVDLYSKWG 382


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 197/581 (33%), Positives = 291/581 (50%), Gaps = 49/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+  + FT     +A +SL   +   KQIH  A+K   + D FV  +  D+YC+     +
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPV-TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     +L TWNA I   +      +A+E F          + IT    + AC  
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            L L  G Q+H   ++SGF+ D+ V +G++D Y KC  +  ++ IF ++   + V+W ++
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           ++  V N E++ A  +Y + R   V   +F  + ++ A + +  LE GR IHA+ +K   
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
               FVG +LVDMY KCG IED+   F +M  +N V  N+++ G A  G  +  L LFE+
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401

Query: 685 MKAHGV--EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           M   G    P+ +TF+ +LSACS  G V    + F  MR  YGIEP  EHYS +VD LGR
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  + A E I  MP + + S+  AL  ACR+ G  + G   AE L  L+P DS  +VLL
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVK-------------------KDPADLIFAKVEGLI 843
           SN FAAA +W +  + R E+K   +K                   KD + ++  +++  +
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581

Query: 844 KRIKE----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEP 899
            +++      GY PD    L D+EEEEK   + +HSEKLA A+GL+S P S  I   K  
Sbjct: 582 AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 641

Query: 900 LYA-----------------------NRFHHLRDGMCPCAD 917
                                     NRFH  +DG+C C D
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 181/409 (44%), Gaps = 9/409 (2%)

Query: 407 LHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
           + L + +H   +K  D+    F++  LI++Y +      A  +       ++ +W ++I 
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81

Query: 466 GYILSNNSH--KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           G  L+ N H   AL  F  M   G   ++ T   A KA   L +   GKQ+HA A+K G 
Sbjct: 82  G--LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            LD+ V     DMY K     DA+ +F++IP  +   W   IS  V +G    A+  + +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
            R     P+  TF   + A S    L  G Q+H  +++    +D  V   L+D Y KC  
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           I  + I+F +M  +N V W +++    Q+   E+   L+   +   VE        VLSA
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319

Query: 704 CS-YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           C+   GL  E   + H    K  +E  +   S LVD  G+ G  +++ +    MP E + 
Sbjct: 320 CAGMAGL--ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNL 376

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
               +L+G    QG  +    + E++       +  Y+   ++ +A ++
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 41/358 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +L++AIS S + LG+  HARI+ +    P  FL N L+ MYS+      AR +    P R
Sbjct: 12  LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SW S+++  A +G  +   V      F  +R      +  T     K   S      
Sbjct: 72  NVVSWTSLISGLAQNGHFSTALVE-----FFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H  A+K G + D FV  +  ++Y K     +A+ LFD + ER++  W   +     
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186

Query: 238 NGFGEEVFHLFVDLHRS-------------GLCPD-------------------DESVQC 265
           +G   E    F++  R                C D                   D  V  
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
             G+I   GK   +Q+++  I +       N V W   ++ Y+Q  ++  A   ++   +
Sbjct: 247 CNGLIDFYGKC--KQIRSSEI-IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             V+         L+A AG   L LG+ IH   +K+     + VG++L++MY K GC+
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG   H  +L S    D  + N L+  Y +C  +  +  +F +M  ++ +SW S++AA
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           Y  + E    +V     L+   R+ I  TS   ++ +L  C     +    ++H +A+K 
Sbjct: 285 YVQNHEDEKASV-----LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            +    FV  ALV++Y K G I +++  FD M E+++V    ++  YA  G  +    LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399

Query: 249 VDLHRSGLCP 258
            ++   G  P
Sbjct: 400 EEMAPRGCGP 409



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L      + L LG+S HA  + +      F+ + L+ MY +CG +  + + FD+MP++
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSGYV 175
           +L++ NS++  YAH G+     V     LF  +  R      + +T   LL  C  +G V
Sbjct: 375 NLVTRNSLIGGYAHQGQ-----VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 192/578 (33%), Positives = 302/578 (52%), Gaps = 57/578 (9%)

Query: 389 DQFTLASVLRASSSL---PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           D+FT  ++L A + L   P   HL + I    + +  +        LI    +NG +  A
Sbjct: 76  DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNI--------LIGGCIKNGDLGSA 127

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             LF+     ++ATWNAM+ G         +L+ F  M   G   DE  + +  + C  L
Sbjct: 128 RELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGL 187

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           L +  G+Q+HAY ++SG + D+CV + +  MY++CG + + +++   +P+   V++ T I
Sbjct: 188 LDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTI 247

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G   NG+ + AL  +  MR   V PD  TF   +   S L AL QG+Q+HA +IK    
Sbjct: 248 AGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVD 307

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
               V  SLV MY++CG + D+  ++      +  L +AM+     HG G + ++LF+ M
Sbjct: 308 KVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQM 367

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G EP+ VTF+ +L ACS++GL  E  E F LM + YG +P V+HY+ +VD LGR+G 
Sbjct: 368 MNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGC 427

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA  LILSMP  A   + + LL AC+ Q + +  + +AE+++  +P DS+ YVLLSNI
Sbjct: 428 LDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNI 487

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
            A + +W DVT  R  M+ K+++K+P                          I   ++ +
Sbjct: 488 RATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEM 547

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI------ 893
           + +I++ GY PD   V  D+E+EEKE +L +HSEKLA A+  ++ P   P  V+      
Sbjct: 548 MGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVC 607

Query: 894 ------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                       ++ +E +    +RFHH RDG C C D
Sbjct: 608 DDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGD 645



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 52/252 (20%)

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           + W+  + G + N     G +  A+ LFD M  R+V  W  M+      G  E+    F+
Sbjct: 109 MSWNILIGGCIKN-----GDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFL 163

Query: 250 DLHRSGLCPDDESV----QCVLGVISDLGKRHEEQVQAYAIK------------------ 287
            + R G+ PD+  +    +C  G++  +  R   QV AY ++                  
Sbjct: 164 AMRREGMHPDEFGLGSVFRCCAGLLDVVSGR---QVHAYVVRSGMDSDMCVGNSLAHMYM 220

Query: 288 ----------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                     +L    +  +V +N  ++G  Q GD+ GA+E F  M    V  D VTF+ 
Sbjct: 221 RCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVS 280

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------CGLR 387
           A++  +    L  GQQ+H   +K+G    V V  SL++MYS+ GC+          CGL 
Sbjct: 281 AISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGL- 339

Query: 388 TDQFTLASVLRA 399
            D F L++++ A
Sbjct: 340 -DLFLLSAMISA 350



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 85/393 (21%), Positives = 148/393 (37%), Gaps = 68/393 (17%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS------------ 99
           S +  FS +  A     LL  +  HA    S    DRF TNNL+  Y+            
Sbjct: 43  SDASLFSHIFRACRAIPLL--RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLF 100

Query: 100 -------------------RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENV 140
                              + G L  AR LFDKMP R++ +WN+++A   + G       
Sbjct: 101 EGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDE---- 156

Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
            +  + F ++R          L  + + C     V +   VH Y ++ G+  D  V  +L
Sbjct: 157 -DSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSL 215

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
            ++Y + G + E + +   +    +V +   +    +NG  E     F  +    + PD 
Sbjct: 216 AHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDV 275

Query: 261 ESVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYNNNSNVVLWNKKLSG 306
            +    +   SDL    + +QV A  IK             + +Y+    +    +   G
Sbjct: 276 VTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDG 335

Query: 307 YLQV---------------GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           Y  +               G  H A+E F  M+    + + VTFL  L A + +   + G
Sbjct: 336 YCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEG 395

Query: 352 QQIHGTTLKS-GFYSAVIVGNSLINMYSKMGCV 383
            +      K+ GF  +V   N ++++  + GC+
Sbjct: 396 LEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCL 428



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 137/309 (44%), Gaps = 19/309 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + N+L  MY RCG L     +   +P  
Sbjct: 179 SVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSL 238

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR---ESITFTSRLTLAPLLKLCLSSGY 174
            ++S+N+ +A    +G  ++E   E F + R +    + +TF S ++       C     
Sbjct: 239 TIVSFNTTIAGRTQNG--DSEGALEYFSMMRGVEVAPDVVTFVSAISC------CSDLAA 290

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + VH   +K G+     V  +LV++YS+ G + +++ ++DG    D+ L   M+ A
Sbjct: 291 LAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISA 350

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
              +G G +   LF  +   G  P++ +   +L   S  G + +E ++ + +    Y   
Sbjct: 351 CGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLK-DEGLEFFELMTKTYGFQ 409

Query: 295 SNVVLWN--KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
            +V  +N    L G     D   A+     ++   V+ D V +   L+A     N ++ +
Sbjct: 410 PSVKHYNCIVDLLGRSGCLDEAEAL-----ILSMPVRADGVIWKTLLSACKTQKNFDMAE 464

Query: 353 QIHGTTLKS 361
           +I    ++S
Sbjct: 465 RIAERVIES 473


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 196/584 (33%), Positives = 309/584 (52%), Gaps = 44/584 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLG 351
           N   + LWN  ++GY +      A+E F  ++    ++ DS T+   L A  G     LG
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK------------------MGC-----VCGLRT 388
           + IH   +K+G    ++VG+SL+ MY+K                  + C      C  ++
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 389 DQFTLA-----------------SVLRASSSLPEGLHLSK--QIHVHAIKNDTVADSFVS 429
             F  A                 ++  A SS    L L++  +IH   I +  + DSF+S
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           +AL+D+Y + G +  A  +FE      +  WN+MI GY L  +S   ++LF  M+  G +
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVK 305

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
               T+++ +  C     L +GK +H Y +++  + D+ ++S ++D+Y KCG +  A++I
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENI 365

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F  IP    V+W  MISG V  G+   AL ++ +MR S V PD  TF  ++ A S L AL
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAAL 425

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           E+G +IH  +I+    ++  V  +L+DMYAKCG +++A+ +FK +  R+ V W +M+   
Sbjct: 426 EKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG     L+LF +M    ++PD VTF+ +LSAC + GLV E    F+ M   YGI P 
Sbjct: 486 GSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPR 545

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKL 788
           VEHYS L+D LGRAGR  EA E++   P       +   L  ACR+  + + G  +A  L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +  +P DSS Y+LLSN++A+A++WD+V   R +MK   +KK+P 
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 12/375 (3%)

Query: 389 DQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           D   L  +LRA   S SL +G  + +++    ++ND     F+   LI++Y        A
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDI----FLCKNLINLYLSCHLYDHA 57

Query: 446 EYLFEN-KDGFDLATWNAMIFGYILSNNSHKALELFSH-MHTSGERLDEITIATAVKACG 503
           + +F+N ++  +++ WN ++ GY  +    +ALELF   +H    + D  T  + +KACG
Sbjct: 58  KCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACG 117

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L     GK +H   +K+G  +D+ V S ++ MY KC A   A  +FN++P  D   W T
Sbjct: 118 GLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNT 177

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           +IS    +G    AL  +  MR  G  P+  T    + + + L  L +G +IH  LI   
Sbjct: 178 VISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSG 237

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              D F+  +LVDMY KCG++E A  +F+QM  +  V WN+M+ G    G+    ++LF+
Sbjct: 238 FLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFK 297

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTG-LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
            M   GV+P   T   ++  CS +  L+   + + + +R +  I+ +V   S L+D   +
Sbjct: 298 RMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR--IQSDVFINSSLMDLYFK 355

Query: 743 AGRTKEAGELILSMP 757
            G+ + A  +   +P
Sbjct: 356 CGKVELAENIFKLIP 370



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 158/669 (23%), Positives = 271/669 (40%), Gaps = 94/669 (14%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           + +   +LR  +++  L  GK  H +++      D FL  NL+ +Y  C    +A+ +FD
Sbjct: 3   TRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFD 62

Query: 113 KMPDRDLIS-WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTLAPLLKLCL 170
            M +   IS WN ++A Y  +         E   LF  L           T   +LK C 
Sbjct: 63  NMENPCEISLWNGLMAGYTKN-----YMYVEALELFEKLLHYPYLKPDSYTYPSVLKACG 117

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                   + +H   +K GL+ D  V  +LV +Y+K     +A +LF+ M E+DV  W  
Sbjct: 118 GLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNT 177

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS---DLGKR---HEEQVQA- 283
           ++  Y ++G  +E    F  + R G  P+  ++   +   +   DL +    HEE + + 
Sbjct: 178 VISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSG 237

Query: 284 ----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
                                  AI++        VV WN  +SGY   GD+   I+ F 
Sbjct: 238 FLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFK 297

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M    V+    T    +   + +  L  G+ +HG T+++   S V + +SL+++Y K G
Sbjct: 298 RMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCG 357

Query: 382 CV----------------------------------CGL---------RTDQFTLASVLR 398
            V                                   GL           D  T  SVL 
Sbjct: 358 KVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLT 417

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A S L   L   ++IH   I+     +  V  AL+D+Y + G++ EA  +F+     DL 
Sbjct: 418 ACSQLA-ALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQ 513
           +W +MI  Y     ++ ALELF+ M  S  + D +T    + ACG   ++ +G     + 
Sbjct: 477 SWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQM 536

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVA-WTTMISGCVDN 571
           ++ Y +    E   C    ++D+  + G + +A  I    P   DDV   +T+ S C  +
Sbjct: 537 VNVYGIIPRVEHYSC----LIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              DL   I   + +     D  T+ +L    +     ++ R + + + +L    +P  G
Sbjct: 593 RNIDLGAEIARTL-IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNP--G 649

Query: 632 ISLVDMYAK 640
            S +++  K
Sbjct: 650 CSWIEINQK 658



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 5/271 (1%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   +   ++AC     LKQGK +H   +  G + D+ +   ++++Y+ C     A+ +
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60

Query: 550 FNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPDEFTFAILVKASSCLT 607
           F+++  P +++ W  +++G   N     AL ++ + +    + PD +T+  ++KA   L 
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
               G+ IH  L+K     D  VG SLV MYAKC   E A  LF +M  ++   WN ++ 
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGI 726
              Q GN +E L+ F  M+  G EP+SVT    +S+C+    ++   E +  L+   + +
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +  +   S LVD  G+ G  + A E+   MP
Sbjct: 241 DSFIS--SALVDMYGKCGHLEMAIEVFEQMP 269


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 204/595 (34%), Positives = 310/595 (52%), Gaps = 85/595 (14%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL-HLSKQIHVHAIKNDT-VADSFVSTA 431
           I++Y +M    G+  D+FT +SV +A S L  GL H  ++ H  ++     V++ FV +A
Sbjct: 162 IDIYQRM-VPDGILPDEFTFSSVFKAFSDL--GLVHEGQRAHGQSVVLGVGVSNVFVGSA 218

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+D+Y + G M +A  + +   G D+  + A+I GY       ++L++F +M   G   +
Sbjct: 219 LVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEAN 278

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E T+++ +  CG L  L  G+ +H   +K+G E                           
Sbjct: 279 EYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE--------------------------- 311

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
                  V WT++I G V NG E++AL  + QM  S + P+ FT + +++A S L  LEQ
Sbjct: 312 -----SAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQ 366

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+QIHA ++K     D +VG +L+D Y KCG+ E A  +F  +   + V  N+M+   AQ
Sbjct: 367 GKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQ 426

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           +G G E L+LF  MK  G+EP++VT++GVLSAC+  GL+ E    F   R    IE   +
Sbjct: 427 NGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKD 486

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY+ +VD LGRAGR KEA E++++    +   + R LL ACR+ GD E  K V  +++ L
Sbjct: 487 HYACMVDLLGRAGRLKEA-EMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDL 545

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----DL------------- 834
            P D   +VLLSN++A+   W  V   +  M+   +KK+PA    D+             
Sbjct: 546 APEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWS 605

Query: 835 ------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                 I  K+E LI+++KE GYVPDT FVL D++EE+K R+LYYHSEKLA A+ L  + 
Sbjct: 606 HPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSN 665

Query: 889 PSSVILSNKEPLY------------------------ANRFHHLRDGMCPCADNC 919
             +  +   + L                           RFHH R+G+C C D C
Sbjct: 666 YKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYC 720



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 236/507 (46%), Gaps = 73/507 (14%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L+  Y +CGS+VYAR++FD++P R +++WNS++A+Y  +G        E   +++ 
Sbjct: 113 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSK-----EAIDIYQR 167

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL-VWDEFVSGALVNIYSKFG 208
           +          T + + K     G V   +  HG ++ +G+ V + FV  ALV++Y+KFG
Sbjct: 168 MVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG 227

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           K+R+A+ + D +  +DVVL+  ++  Y+ +G   E   +F ++ + G+  ++ ++  VL 
Sbjct: 228 KMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLV 287

Query: 269 VISDLGKRHEEQVQAYAIK-LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
              +L    E+      I  L++     + V W   + G +Q G    A+  F  M+RS+
Sbjct: 288 CCGNL----EDLTSGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSS 343

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           +  +S T    L A +    L  G+QIH   +K G      VG +LI+ Y K G      
Sbjct: 344 ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGST---- 399

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                       + S+  GL          ++ D V+      ++I  Y +NG       
Sbjct: 400 ----------EIARSVFNGL----------LEVDVVS----VNSMIYSYAQNG------- 428

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                            FG       H+AL+LFS M  +G   + +T    + AC    +
Sbjct: 429 -----------------FG-------HEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGL 464

Query: 508 LKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           L++G  + + A  SG  EL     + ++D+  + G + +A+ + N +   D V W T++S
Sbjct: 465 LEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLS 524

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDE 593
            C  +G+ ++A  + +  R+  + P++
Sbjct: 525 ACRIHGDVEMAKRVMN--RVIDLAPED 549



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 144/255 (56%), Gaps = 5/255 (1%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           ++ ++ C  +  +    ++ ++A+K GF   L   + ++D Y+KCG++V A+ +F+++P 
Sbjct: 82  SSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPH 139

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
              VAW +MI+  + NG    A+ IY +M   G++PDEFTF+ + KA S L  + +G++ 
Sbjct: 140 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 199

Query: 616 HANLIKLDCS-SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           H   + L    S+ FVG +LVDMYAK G + DA ++  Q+  ++ VL+ A++VG + HG 
Sbjct: 200 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGE 259

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
             E+L++F +M   G+E +  T   VL  C     ++      H +  K G+E  V   S
Sbjct: 260 DGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSG-RLIHGLIVKAGLESAVTWTS 318

Query: 735 FLVDALGRAGRTKEA 749
            +V  L + GR + A
Sbjct: 319 VIV-GLVQNGREEIA 332



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 157/339 (46%), Gaps = 36/339 (10%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           +I  HA+K        +   LID Y + GS+  A  +F+      +  WN+MI  YI + 
Sbjct: 99  KIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 156

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVS 530
            S +A++++  M   G   DE T ++  KA   L ++ +G++ H  ++  G  + ++ V 
Sbjct: 157 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 216

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S ++DMY K G M DA+ + + +   D V +T +I G   +GE+  +L ++  M   G+ 
Sbjct: 217 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 276

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            +E+T + ++     L  L  GR IH  ++K                             
Sbjct: 277 ANEYTLSSVLVCCGNLEDLTSGRLIHGLIVK----------------------------- 307

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
                + + V W +++VGL Q+G  E  L  F  M    + P+S T   VL ACS   ++
Sbjct: 308 ---AGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAML 364

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            +  +  H +  K+G++ +    + L+D  G+ G T+ A
Sbjct: 365 EQG-KQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIA 402



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 22/240 (9%)

Query: 36  LSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLM 95
           ++LL F Q    S + +S    S+LR   S + L  GK  HA ++      D+++   L+
Sbjct: 331 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 390

Query: 96  TMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
             Y +CGS   AR +F+ + + D++S NS++ +YA +G G+     E  +LF  ++++  
Sbjct: 391 DFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGH-----EALQLFSGMKDTGL 445

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYAL-----KIGLVWDEFVSGALVNIYSKFGKI 210
             + +T   +L  C ++G +   E  H ++       I L  D +    +V++  + G++
Sbjct: 446 EPNNVTWLGVLSACNNAGLL--EEGCHIFSSARNSGNIELTKDHY--ACMVDLLGRAGRL 501

Query: 211 REAKFLFDGMQERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           +EA+ L + +   DVV+W+ +L   R + +    + V +  +D     L P+D     +L
Sbjct: 502 KEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID-----LAPEDGGTHVLL 556


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 200/576 (34%), Positives = 313/576 (54%), Gaps = 69/576 (11%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK   +   F+ T LI +Y +  S+ +A  +F+     ++ +W AMI  Y   
Sbjct: 263 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQR 322

Query: 471 NNSHKALELF---SHMHTSG----ERL--------------DEITIATAVKACGCLLMLK 509
             + +AL LF     +  +G    ++L              +E T AT + +C   L   
Sbjct: 323 GYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFI 382

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G+Q+H+  +K  +E  + V S +LDMY K G + +A+++F  +P  D V+ T +ISG  
Sbjct: 383 LGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYA 442

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
             G ++ AL ++ +++  G+  +  T+  ++ A S L AL+ G+Q+H ++++ +  S   
Sbjct: 443 QLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVV 502

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH- 688
           +  SL+DMY+KCGN+  +  +F  M  R  + WNAMLVG ++HG G E LKLF  M+   
Sbjct: 503 LQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREET 562

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE-KYGIEPEVEHYSFLVDALGRAGRTK 747
            V+PDSVT + VLS CS+ GL  +    F+ M   K  +EP++EHY  +VD LGR+GR +
Sbjct: 563 KVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVE 622

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA E I  MPFE +A++  +LLGACRV  + + G++  ++L+ +EP ++  YV+LSN++A
Sbjct: 623 EAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYA 682

Query: 808 AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
           +A +W+DV+S R  M +K V K+P                        + I  KV+ L  
Sbjct: 683 SAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELST 742

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE------ 898
             KE GYVPD   VL DV+EE+KE+ L  HSEKLA ++GLI++P S  I   K       
Sbjct: 743 SFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVD 802

Query: 899 ---------PLYA--------NRFHHLRDGMCPCAD 917
                     +Y         NRFH +  G C C D
Sbjct: 803 CHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCED 838



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 21/219 (9%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            ++G+++HA+ +K+ +   + + + ++ +Y KC ++ DA ++F+++P  + V+WT MIS 
Sbjct: 259 FREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISA 318

Query: 568 CVDNGEEDLALSIYH---QMRLSGVV------------------PDEFTFAILVKASSCL 606
               G    AL+++    ++ L+GV                   P+EFTFA ++ + +  
Sbjct: 319 YSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSS 378

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
                GRQIH+ +IKL+     FVG SL+DMYAK G I +A  +F+ +  R+ V   A++
Sbjct: 379 LGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAII 438

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            G AQ G  EE L+LF  ++  G++ + VT+ GVL+A S
Sbjct: 439 SGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 477



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 164/365 (44%), Gaps = 51/365 (13%)

Query: 29  RNLPSFSLSL---LPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           R L +F+  +    P LQ +    +     + +IL   ++      G+  HA ++ +  +
Sbjct: 216 RTLSTFTTHIHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYL 275

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG-EGNAENV---- 140
           P  FL   L+ +Y++C SL  A  +FD+MP+R+++SW ++++AY+  G    A N+    
Sbjct: 276 PSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFAD 335

Query: 141 ----------TEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSS-GYVWASETVHGYALKI 188
                      +  +L    R  + T  +  T A +L  C SS G++   + +H   +K+
Sbjct: 336 VKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQ-IHSLIIKL 394

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
                 FV  +L+++Y+K GKI EA+ +F+ + ERDVV    ++  YA+ G  EE   LF
Sbjct: 395 NYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELF 454

Query: 249 VDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS-------- 295
             L   G+  +  +   VL  +S     DLGK+    V    I   +   NS        
Sbjct: 455 RRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKC 514

Query: 296 ----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVA 338
                            V+ WN  L GY + G+    ++ F  M   + V+ DSVT L  
Sbjct: 515 GNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAV 574

Query: 339 LAAVA 343
           L+  +
Sbjct: 575 LSGCS 579



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 44/384 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +S Y Q G    A+  F   ++           ++L  V   D L L     
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVK-----------ISLTGVYAIDKLKLSN--- 353

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA-SSSLPEGLHLSKQIH 414
                                      VC    ++FT A+VL + +SSL  G  L +QIH
Sbjct: 354 ----------------------PNRPWVCT-EPNEFTFATVLTSCTSSL--GFILGRQIH 388

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              IK +     FV ++L+D+Y ++G + EA  +FE     D+ +  A+I GY       
Sbjct: 389 SLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDE 448

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +ALELF  +   G + + +T    + A   L  L  GKQ+H + ++S     + + + ++
Sbjct: 449 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLI 508

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDE 593
           DMY KCG +  ++ IF+ +     ++W  M+ G   +GE    L ++  MR  + V PD 
Sbjct: 509 DMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDS 568

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILF 651
            T   ++   S     ++G  I  ++       +P +     +VD+  + G +E+A+   
Sbjct: 569 VTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFI 628

Query: 652 KQMDMRNT-VLWNAMLVGLAQHGN 674
           K+M    T  +W ++L     H N
Sbjct: 629 KKMPFEPTAAIWGSLLGACRVHSN 652



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 40/195 (20%)

Query: 69  LLLGKSTHARILNSSQIPD-RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L LGK  H  +L S +IP    L N+L+ MYS+CG+L Y+RR+FD M +R +ISWN++L 
Sbjct: 482 LDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLV 540

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTLAPLLKLC---------------LS 171
            Y+  GEG      E  +LF  +RE        +T+  +L  C               +S
Sbjct: 541 GYSKHGEGR-----EVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMS 595

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKV 230
           SG +     +  Y             G +V++  + G++ EA +F+     E    +W  
Sbjct: 596 SGKIEVEPKMEHY-------------GCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGS 642

Query: 231 ML---RAYAENGFGE 242
           +L   R ++    GE
Sbjct: 643 LLGACRVHSNVDIGE 657



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 24/172 (13%)

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A  +G+++HA++IK       F+   L+ +Y KC ++ DA+ +F +M  RN V W AM+ 
Sbjct: 258 AFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMIS 317

Query: 668 GLAQHGNGEETLKL-FEDMKAH--GV------------------EPDSVTFIGVLSACSY 706
             +Q G   + L L F D+K    GV                  EP+  TF  VL++C+ 
Sbjct: 318 AYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTS 377

Query: 707 T-GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + G +       H +  K   E  V   S L+D   + G+  EA  +   +P
Sbjct: 378 SLGFI--LGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 194/575 (33%), Positives = 301/575 (52%), Gaps = 47/575 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +++ L++ + A++++     + +Q H +A+K       +V  A++ +YC+   M +A  +
Sbjct: 107 NEYVLSAAVSATANV-RSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKV 165

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE+  GFD   +N+MI GY+       +L +  +M    E+ D ++    +  C  +   
Sbjct: 166 FESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDS 225

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G Q+HA A+K   EL++ V S ++DMY KC  + DA   F  +P  + V+WT +++  
Sbjct: 226 VLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAY 285

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             N   + AL ++  M + GV P+EFT+A+ + + + L AL  G  + A ++K       
Sbjct: 286 TQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHL 345

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L++MY+K G+IEDA+ +F  M +R+ V WN ++ G A HG   E ++ F  M + 
Sbjct: 346 LVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSA 405

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            V P  VTF+GVLSAC+  GLV EA+   + M ++ GI P  EHY+ +V  L R GR  E
Sbjct: 406 AVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDE 465

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A   I++          R+LL +C+V  +   G  VAE+++ LEP D   YVLLSN++A 
Sbjct: 466 AERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAK 525

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
           AN+WD V   R  M+ + V+K P                        D I  K+E LI +
Sbjct: 526 ANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQ 585

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS--------------- 890
           IK  GYVP+   VL D+++E KE  L YHSEKLA A+GLI TP                 
Sbjct: 586 IKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDC 645

Query: 891 -------SVILSNKEPLY-ANRFHHLRDGMCPCAD 917
                  SV+ S K  +  A RFH +  G+C C D
Sbjct: 646 HVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCND 680



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 166/347 (47%), Gaps = 6/347 (1%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  +   LI  Y + G +  A  +F+     +  + N ++ GY  S    ++L+L   + 
Sbjct: 44  DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVVD 103

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
                ++E  ++ AV A   +     G+Q H YA+K+GF     V + +L MY +C  M 
Sbjct: 104 FG---MNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHME 160

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           DA  +F  +   D  A+ +MI+G +D G+ D +L I   M       D  ++  ++   +
Sbjct: 161 DASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCA 220

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            +     G Q+HA  +K     + +VG +LVDMY KC ++ DA   F+ +  +N V W A
Sbjct: 221 SMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTA 280

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN-FHLMREK 723
           ++    Q+   E+ L+LF DM+  GV+P+  T+   L++C+  GL +    N       K
Sbjct: 281 VMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCA--GLAALRTGNALGACVMK 338

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            G    +   + L++   ++G  ++A  + +SMP     S +  + G
Sbjct: 339 TGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITG 385



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 123/545 (22%), Positives = 212/545 (38%), Gaps = 125/545 (22%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  GK+ HAR++ ++   D  L NNL++ Y++CG +  AR +FD MP R+ +S N +++
Sbjct: 26  DLSKGKALHARLITAAHF-DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84

Query: 128 AYAHSGEGNAENVTEGFRLFR---------SLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            YA SG        E  +L R          L  +++ T+ +    + + C         
Sbjct: 85  GYASSGRHK-----ESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQC--------- 130

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
              HGYA+K G     +V  A++ +Y +   + +A  +F+ +   D   +  M+  Y + 
Sbjct: 131 ---HGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDR 187

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIKLLLYNN---- 293
           G  +    +  ++       D  S   VLG  + +       QV A A+K  L  N    
Sbjct: 188 GQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVG 247

Query: 294 ------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                     NVV W   ++ Y Q      A++ F++M    VQ
Sbjct: 248 SALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQ 307

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            +  T+ VAL + AG   L  G  +    +K+G +  ++V N+L+NMYSK G +      
Sbjct: 308 PNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSI------ 361

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                          E  H                  F+S  L DV              
Sbjct: 362 ---------------EDAH----------------RVFISMPLRDV-------------- 376

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                    +WN +I GY     + + +E F  M ++      +T    + AC  L ++ 
Sbjct: 377 --------VSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVD 428

Query: 510 QG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS-IFNDIPAPDDVAWTT 563
           +        M    +  G E   C    ++ +  + G + +A+  I N+    D VAW +
Sbjct: 429 EAFYYLNTMMKEVGITPGKEHYTC----MVGLLCRVGRLDEAERFIVNNCIGTDVVAWRS 484

Query: 564 MISGC 568
           +++ C
Sbjct: 485 LLNSC 489



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 7/220 (3%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L H  S  D +LG   HA+ L      + ++ + L+ MY +C  +  A R F+ +P
Sbjct: 212 YVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLP 271

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +++++SW +++ AY  +     E   +  +LF  +       +  T A  L  C     +
Sbjct: 272 EKNVVSWTAVMTAYTQN-----ELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAAL 326

Query: 176 WASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
                +    +K G  WD   VS AL+N+YSK G I +A  +F  M  RDVV W +++  
Sbjct: 327 RTGNALGACVMKTGH-WDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITG 385

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           YA +G   E    F  +  + + P   +   VL   + LG
Sbjct: 386 YAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLG 425


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 202/553 (36%), Positives = 299/553 (54%), Gaps = 87/553 (15%)

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
            EN +GF    WN M+  YI SN++ KAL L+  M  +    D  T    V+AC   L+ 
Sbjct: 89  IENSNGF---MWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 145

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             GK++H + +K GF+ D+ V + +++MY  CG M DA+ +F++ P  D V+W ++++G 
Sbjct: 146 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 205

Query: 569 VDNG----------------EEDL------------------ALSIYHQMRLSGVVPDEF 594
           V  G                E+D+                  AL ++ +M  +G+  DE 
Sbjct: 206 VKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEV 265

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV----DMYAKCGNIEDAYIL 650
               ++ A + L+ ++ G+ IH  +I++   S   +  +L+    DMY KCG +E+A  +
Sbjct: 266 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEV 325

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M+ +    WNA+++GLA +G  E +L +F +MK +GV P+ +TF+GVL AC + GLV
Sbjct: 326 FNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLV 385

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E   +F  M EK+GIEP V+HY  +VD LGRAG   EA +LI SMP     +   ALLG
Sbjct: 386 DEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLG 445

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           AC+  GDTE G+ V  KL+ L+P     +VLLSNIFA+   W+DV   RG MK++ V K 
Sbjct: 446 ACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKT 505

Query: 831 PA-DLIFA------------------KVEGLI----KRIKEGGYVPDTDFVLLDVEEEEK 867
           P   LI A                  KVEG++    KR+K  GY PDT+ V LD++EEEK
Sbjct: 506 PGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEK 565

Query: 868 ERALYYHSEKLARAYGLIS-TPPSSV-ILSNKE-------------PLYA--------NR 904
           E  L+ HSEKLA A+GL++ +PP+ + I+ N                 YA        +R
Sbjct: 566 ETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHR 625

Query: 905 FHHLRDGMCPCAD 917
           FH+ ++G C C D
Sbjct: 626 FHYFKEGACSCMD 638



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 197/403 (48%), Gaps = 39/403 (9%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           Y++++     NSN  +WN  +  Y+Q      A+  +  M+++NV  D+ T+ + + A A
Sbjct: 81  YSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA 140

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
                  G++IH   LK GF S V V N+LINMY+    VCG   D   L          
Sbjct: 141 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYA----VCGNMRDARKL---------- 186

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA---EAEYLFENKDGFDLATW 460
                              V DS    +++  Y + G M    EA  LF   D  D+ +W
Sbjct: 187 --------------FDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSW 232

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           +A+I GY  +    +AL +F  M+ +G RLDE+ + + + AC  L ++K GK +H   ++
Sbjct: 233 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 292

Query: 521 SGFELDLCVSSGIL----DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            G E  + + + ++    DMY+KCG + +A  +FN +      +W  +I G   NG  + 
Sbjct: 293 MGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER 352

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SL 634
           +L ++ +M+ +GV+P+E TF  ++ A   +  +++GR   A++I+     +P V     +
Sbjct: 353 SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIE-KHGIEPNVKHYGCM 411

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGE 676
           VD+  + G + +A  L + M M   V  W A+L    +HG+ E
Sbjct: 412 VDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTE 454



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 155/368 (42%), Gaps = 61/368 (16%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARI 79
            SS  K T+ + P+F  ++   + ++H  +  +  Q+  IL   I T             
Sbjct: 9   LSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTG------------ 56

Query: 80  LNSSQIPDRFLTNNLMTMYSRCG--SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
                I D F  + L+   +      L Y+ ++FD++ + +   WN+++ AY  S     
Sbjct: 57  ----FISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSN---- 108

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
            +  +   L++ + ++       T   +++ C      +  + +H + LK+G   D +V 
Sbjct: 109 -SAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 167

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+N+Y+  G +R+A+ LFD     D V W  +L  Y + G                  
Sbjct: 168 NTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKG------------------ 209

Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
                         D+G+  E      A KL    +  ++V W+  +SGY Q G    A+
Sbjct: 210 --------------DMGQVME------AWKLFNEMDEKDMVSWSALISGYEQNGMYEEAL 249

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F+ M  + ++ D V  +  L+A A    +  G+ IHG  ++ G  S V + N+LI+MY
Sbjct: 250 VMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMY 309

Query: 378 SKMGCVCG 385
           S M   CG
Sbjct: 310 SDMYMKCG 317



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 43/241 (17%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP---------------- 115
           GK  H  +L      D ++ N L+ MY+ CG++  AR+LFD+ P                
Sbjct: 148 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 207

Query: 116 ------------------DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT 157
                             ++D++SW+++++ Y  +G        E   +F  +  +    
Sbjct: 208 KGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGM-----YEEALVMFIEMNANGMRL 262

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS----KFGKIREA 213
             + +  +L  C     V   + +HG  +++G+     +  AL+++YS    K G +  A
Sbjct: 263 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENA 322

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             +F+GM+E+ V  W  ++   A NG  E    +F ++  +G+ P++ +   VLG    +
Sbjct: 323 LEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHM 382

Query: 274 G 274
           G
Sbjct: 383 G 383


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  328 bits (842), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 196/593 (33%), Positives = 308/593 (51%), Gaps = 48/593 (8%)

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           N+ +++Y+ M     +  D FT + VL+A + L    HL   IH    K     D FV T
Sbjct: 86  NNAVHLYASMH-KAAIVPDSFTFSFVLKACARL-NLFHLGVMIHSLVFKTGFDCDVFVKT 143

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            ++  Y + G + +A  +F++    ++ +W  MI G I      +A++LF  +  SG R 
Sbjct: 144 NVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRP 203

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D   I   ++AC  L  L+ G+ +     + G   ++ V++ ++DMY KCG+M +A+ +F
Sbjct: 204 DGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVF 263

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   D V W+ MI G   NG    A+ ++ +MR   V PD +     + + + L ALE
Sbjct: 264 DGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALE 323

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G      +   +  S+P +G SL+D YAKCG++E+A  ++K M  ++ V++NA++ GLA
Sbjct: 324 LGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLA 383

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            +G       +F  M   G+ P+  TF+G+L  C++ GLV +    F+ M   + + P +
Sbjct: 384 MYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTI 443

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY  +VD L RAG   EA  LI  MP +A+  +  +LLG CR+  +T+  + V ++L+ 
Sbjct: 444 EHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIE 503

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------- 831
           LEP++S  YVLLSNI++A+ +WD+    R  +  K ++K P                   
Sbjct: 504 LEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDT 563

Query: 832 ----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
               +  I+ K+E L K +KE GY P T+FVL DVEEEEKE  L  HSEKLA A+ LIST
Sbjct: 564 SHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALIST 623

Query: 888 PPSSVI---------------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
               VI                     ++ +E +    NRFH   DG C C D
Sbjct: 624 GAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRD 676



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 25/367 (6%)

Query: 2   YTQLQANLKPRHKHTYV----IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWF 57
           Y  L  +  P + +T++    I    +KD + N      S+       H ++    S  F
Sbjct: 55  YPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASM-------HKAAIVPDSFTF 107

Query: 58  SILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           S +  A +  +L  LG   H+ +  +    D F+  N++  YS+CG L  A ++FD M  
Sbjct: 108 SFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVV 167

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           ++++SW  ++      G+       E   LFR L ES        +  +L+ C   G + 
Sbjct: 168 KNVVSWTGMICGCIEFGK-----FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLE 222

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           +   +     + GL  + FV+ +LV++Y+K G + EA+F+FDGM E+D+V W  M++ YA
Sbjct: 223 SGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYA 282

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN-S 295
            NG   E   LF ++ +  + PD      ++G +S        ++  +A  L+ Y    S
Sbjct: 283 SNGLPREAIELFFEMRKVNVRPD---CYAMVGALSSCASLGALELGNWAKGLMNYEEFLS 339

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N VL    +  Y + G    A+  +  M     + D V F   ++ +A    +     + 
Sbjct: 340 NPVLGTSLIDFYAKCGSMEEALGVYKMM----KEKDRVVFNAVISGLAMYGQVGAAFGVF 395

Query: 356 GTTLKSG 362
           G   K G
Sbjct: 396 GQMGKFG 402


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  328 bits (842), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 191/595 (32%), Positives = 296/595 (49%), Gaps = 52/595 (8%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           + W   +SGY+   D+  A+  F NM + S ++ D     +A  A     ++N G+ +HG
Sbjct: 81  ISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHG 140

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------------------CVCGL-------- 386
             +K+G  ++V VG++L++MY+K G                       + GL        
Sbjct: 141 YAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKE 200

Query: 387 -------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                          D +T A  L+A +     L+  ++IH  A+K      SFV+  L 
Sbjct: 201 ALVYFSEMWRSRVEYDSYTFAIALKACAD-SGALNYGREIHAQAMKKGFDVSSFVANTLA 259

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y + G +     LFE     D+ +W  +I   +       A++ F  M  S    +E 
Sbjct: 260 TMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEY 319

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T A  +  C  L  ++ G+Q+HA  +  G    L V + I+ MY KCG +  +  IF+++
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D V+W+T+I+G    G    A  +   MR+ G  P EF  A ++ A   +  LE G+
Sbjct: 380 TRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q+HA ++ +       V  +L++MY KCG+IE+A  +F   +  + V W AM+ G A+HG
Sbjct: 440 QLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHG 499

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
              E + LFE +   G+ PDSVTFIGVLSACS+ GLV   +  F+ M +KY I P  EHY
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHY 559

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             ++D L RAGR  +A  +I +MPF     +   LL ACRV GD E G+  AE+++ LEP
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEP 619

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFAKVEG 841
             +  ++ L+NI+A+  +W +    R  MK K V K+P        DL+FA V G
Sbjct: 620 NCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAG 674



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 213/407 (52%), Gaps = 3/407 (0%)

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
           D ++   +I  TTL SG+ +A     +L+ ++  M    GLR D F L S+   +  L  
Sbjct: 73  DKMSQKDEISWTTLISGYVNANDSSEALL-LFKNMRVESGLRIDPFIL-SLAHKACGLNS 130

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            ++  + +H +A+K   V   FV +AL+D+Y +NG + E   +F      ++ +W A+I 
Sbjct: 131 DVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIIT 190

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           G + +  + +AL  FS M  S    D  T A A+KAC     L  G+++HA AMK GF++
Sbjct: 191 GLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 250

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
              V++ +  MY KCG +    ++F  +   D V+WTT+I+  V  G+E+ A+  + +MR
Sbjct: 251 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 310

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
            S V P+E+TFA ++   + L  +E G Q+HA ++ L  ++   V  S++ MYAKCG + 
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            + ++F +M  R+ V W+ ++ G  Q G+  E  +L   M+  G +P       VLSAC 
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 430

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
              ++ E  +  H      G+E      S L++   + G  +EA  +
Sbjct: 431 NMAIL-EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 172/719 (23%), Positives = 304/719 (42%), Gaps = 140/719 (19%)

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           S +   ++ + +P+   +N  +    + G L  ARR+FDKM  +D ISW ++++ Y    
Sbjct: 38  SQNIHFISQTDLPE---SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYV--- 91

Query: 134 EGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
             NA + +E   LF+++R ES        L+   K C  +  V   E +HGYA+K GLV 
Sbjct: 92  --NANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVN 149

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             FV  AL+++Y+K GKI E + +F  M  R+VV W  ++      G+ +E    F ++ 
Sbjct: 150 SVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMW 209

Query: 253 RSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------------------ 287
           RS +  D  +    L   +D G   +  ++ A A+K                        
Sbjct: 210 RSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLE 269

Query: 288 --LLLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             L L+   S  +VV W   ++  +Q+G    A++ F+ M  S+V  +  TF   ++  A
Sbjct: 270 YGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCA 329

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------- 384
               +  G+Q+H   L  G  +++ V NS++ MY+K G +                    
Sbjct: 330 NLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWST 389

Query: 385 ------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   G +  +F LASVL A  ++    H  KQ+H + +  
Sbjct: 390 IIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH-GKQLHAYVLSI 448

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                + V +ALI++YC+ GS+ EA  +F+  +  D+ +W AMI GY     S + ++LF
Sbjct: 449 GLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLF 508

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY-AMKSGFELDLCVS--SGILDMY 537
             +   G R D +T    + AC    ++  G   H + AM   +++         ++D+ 
Sbjct: 509 EKIPRVGLRPDSVTFIGVLSACSHAGLVDLG--FHYFNAMSKKYQISPSKEHYGCMIDLL 566

Query: 538 VKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
            + G + DA+ +   +P   DDV W+T++  C  +G+                       
Sbjct: 567 CRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGD----------------------- 603

Query: 597 AILVKASSCLTALEQGRQIHANLIKLD--CSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
                       +E+GR+    +++L+  C+      I+L ++YA  G   +A  + K M
Sbjct: 604 ------------VERGRRTAERILQLEPNCAG---THITLANIYASKGKWREAADIRKLM 648

Query: 655 DMRNTVL---WN---------AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
             +  +    W+         A + G   H  GE+   + + + +     D V   G L
Sbjct: 649 KSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFL 707



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 5/203 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA IL+        + N++MTMY++CG L  +  +F +M  RD++SW++I+A Y  
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ 396

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     +V+E F L   +R      +   LA +L  C +   +   + +H Y L IGL 
Sbjct: 397 GG-----HVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLE 451

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V  AL+N+Y K G I EA  +FD  +  D+V W  M+  YAE+G+  EV  LF  +
Sbjct: 452 HTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKI 511

Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
            R GL PD  +   VL   S  G
Sbjct: 512 PRVGLRPDSVTFIGVLSACSHAG 534



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 35/325 (10%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           F+I   A + S  L  G+  HA+ +        F+ N L TMY++CG L Y   LF+KM 
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            RD++SW +I+      G+          + F  +RES    +  T A ++  C +   +
Sbjct: 280 MRDVVSWTTIITTLVQMGQEEC-----AVQAFIRMRESDVSPNEYTFAAVISGCANLARI 334

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              E +H   L +GL     V  +++ +Y+K G++  +  +F  M  RD+V W  ++  Y
Sbjct: 335 EWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGY 394

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN- 293
            + G   E F L   +   G  P + ++  VL    ++    H +Q+ AY + + L +  
Sbjct: 395 XQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA 454

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                      N ++V W   ++GY + G +   I+ F  + R 
Sbjct: 455 MVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRV 514

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLG 351
            ++ DSVTF+  L+A +    ++LG
Sbjct: 515 GLRPDSVTFIGVLSACSHAGLVDLG 539



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 2/163 (1%)

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFI 698
           K G++ +A  +F +M  ++ + W  ++ G     +  E L LF++M+   G+  D     
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
               AC     V+   E  H    K G+   V   S L+D   + G+  E   +   MP 
Sbjct: 121 LAHKACGLNSDVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
               S    + G  R   + E   + +E   +   +DS  + +
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAI 222


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 192/558 (34%), Positives = 303/558 (54%), Gaps = 54/558 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H H IK   +  +++ T L+  Y +   + +A  + +     ++ +W AMI  Y  +
Sbjct: 72  QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +S +AL +F+ M  S  + +E T AT + +C     L  GKQ+H   +K  ++  + V 
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +LDMY K G + +A+ IF  +P  D V+ T +I+G    G ++ AL ++H++   G+ 
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI---SLVDMYAKCGNIEDA 647
           P+  T+A L+ A S L  L+ G+Q H ++++ +    PF  +   SL+DMY+KCGN+  A
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRREL---PFYAVLQNSLIDMYSKCGNLSYA 308

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSY 706
             LF  M  R  + WNAMLVG ++HG G E L+LF  M+    V+PD+VT + VLS CS+
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368

Query: 707 TGLVSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
             +       F  ++  +YG +P  EHY  +VD LGRAGR  EA E I  MP + +A + 
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
            +LLGACRV    + G+ V  +L+ +EP ++  YV+LSN++A+A +W DV + R  M +K
Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQK 488

Query: 826 NVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
            V K+P                        + + AK++ +  ++K+ GYVPD   VL DV
Sbjct: 489 AVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV 548

Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA--------- 902
           +EE+KE+ L  HSEKLA  +GLI+T     I             N   +++         
Sbjct: 549 DEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSL 608

Query: 903 ---NRFHHLRDGMCPCAD 917
              NRFH + DG+C C D
Sbjct: 609 RDKNRFHQIVDGICSCGD 626



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 152/275 (55%), Gaps = 7/275 (2%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC     L+ G+++HA+ +K+ +     + + +L  Y KC  + DA+ + +++P  + 
Sbjct: 59  LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA--LEQGRQIH 616
           V+WT MIS     G    AL+++ +M  S   P+EFTFA ++  +SC+ A  L  G+QIH
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVL--TSCIRASGLGLGKQIH 176

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             ++K +  S  FVG SL+DMYAK G I++A  +F+ +  R+ V   A++ G AQ G  E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSF 735
           E L++F  + + G+ P+ VT+  +L+A S   L+    + + H++R +      +++   
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS-- 294

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           L+D   + G    A  L  +MP   + S +  L+G
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 329



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 136/276 (49%), Gaps = 4/276 (1%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           + ++FT A+VL  S     GL L KQIH   +K +  +  FV ++L+D+Y + G + EA 
Sbjct: 150 KPNEFTFATVL-TSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +FE     D+ +  A+I GY       +ALE+F  +H+ G   + +T A+ + A   L 
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA 268

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           +L  GKQ H + ++        + + ++DMY KCG +  A+ +F+++P    ++W  M+ 
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328

Query: 567 GCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           G   +G     L ++  MR    V PD  T   ++   S     + G  I   ++  +  
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG 388

Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + P       +VDM  + G I++A+   K+M  + T
Sbjct: 389 TKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 35/302 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA ++ +  +P  +L   L+  Y +C  L  AR++ D+MP+++++SW ++++ Y+ 
Sbjct: 71  GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G       +E   +F  +  S    +  T A +L  C+ +  +   + +HG  +K    
Sbjct: 131 TGHS-----SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              FV  +L+++Y+K G+I+EA+ +F+ + ERDVV    ++  YA+ G  EE   +F  L
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245

Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK-------------LLLYNNNSNV 297
           H  G+ P+  +   +L  +S L    H +Q   + ++             + +Y+   N+
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305

Query: 298 ---------------VLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAA 341
                          + WN  L GY + G     +E F  M     V+ D+VT L  L+ 
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365

Query: 342 VA 343
            +
Sbjct: 366 CS 367



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 142/345 (41%), Gaps = 61/345 (17%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A K+L      NVV W   +S Y Q G +  A+  F  M+RS+ + +  TF   L +   
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------C------------ 384
              L LG+QIHG  +K  + S + VG+SL++MY+K G +        C            
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G+  +  T AS+L A S L    H  KQ H H ++ +
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH-GKQAHCHVLRRE 284

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
               + +  +LID+Y + G+++ A  LF+N       +WNAM+ GY       + LELF 
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344

Query: 482 HMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMH------AYAMKSGFELDLCVSSGIL 534
            M      + D +T+   +  C    M   G  +        Y  K G E   C    I+
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC----IV 400

Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC-----VDNGE 573
           DM  + G + +A      +P+ P      +++  C     VD GE
Sbjct: 401 DMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 5/191 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L   I  S L LGK  H  I+  +     F+ ++L+ MY++ G +  AR +F+ +P+R
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++S  +I+A YA  G        E   +F  L       + +T A LL        +  
Sbjct: 218 DVVSCTAIIAGYAQLGLDE-----EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            +  H + L+  L +   +  +L+++YSK G +  A+ LFD M ER  + W  ML  Y++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332

Query: 238 NGFGEEVFHLF 248
           +G G EV  LF
Sbjct: 333 HGLGREVLELF 343


>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 171/457 (37%), Positives = 269/457 (58%), Gaps = 47/457 (10%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           ++ G+ +H+  ++SGF   + V + +L +Y  CG +  A  +F+ +P  D VAW ++I+G
Sbjct: 4   VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
             +NG+ + AL++Y +M   G+ PD FT   L+ A + + AL  G+++H  +IK+  + +
Sbjct: 64  FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
                 L+D+YA+CG +E+A  LF +M  +N+V W +++VGLA +G G+E ++LF+ M++
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183

Query: 688 -HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+ P  +TF+G+L ACS+ G+V E +E F  MRE+Y IEP +EH+  +VD L RAG+ 
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
           K+A E I SMP + +  + R LLGAC V GD++  ++   +++ LEP  S  YVLLSN++
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303

Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
           A+  +W DV   R +M R  VKK P                       +D I+AK++ + 
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------- 893
            R++  GYVP    V +DVEEEEKE A+ YHSEK+A A+ LISTP  S I          
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423

Query: 894 -----------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                      + N+E +  +  RFHH ++G C C D
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQD 460



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 155/292 (53%), Gaps = 9/292 (3%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           + L + IH   I++   +  +V  +L+ +Y   G +A A  +F+     DL  WN++I G
Sbjct: 4   VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           +  +    +AL L++ M++ G + D  TI + + AC  +  L  GK++H Y +K G   +
Sbjct: 64  FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR- 585
           L  S+ +LD+Y +CG + +A+++F+++   + V+WT++I G   NG    A+ ++  M  
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCG 642
             G++P E TF  ++ A S    +++G +    +    K++   + F    +VD+ A+ G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG--CMVDLLARAG 241

Query: 643 NIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
            ++ AY   K M M+ N V+W  +L     HG+ +  L  F  ++   +EP+
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 6/209 (2%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +D+ LG++ H+ ++ S      ++ N+L+ +Y+ CG +  A ++FDKMP++DL++WNS++
Sbjct: 2   ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
             +A +G+       E   L+  +          T+  LL  C   G +   + VH Y +
Sbjct: 62  NGFAENGKPE-----EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           K+GL  +   S  L+++Y++ G++ EAK LFD M +++ V W  ++   A NGFG+E   
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176

Query: 247 LFVDLHRS-GLCPDDESVQCVLGVISDLG 274
           LF  +  + GL P + +   +L   S  G
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCG 205



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LGK  H  ++      +   +N L+ +Y+RCG +  A+ LFD+M D+
Sbjct: 94  SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLC-----LS 171
           + +SW S++   A +G G      E   LF+ +  +       +T   +L  C     + 
Sbjct: 154 NSVSWTSLIVGLAVNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKV 230
            G+ +       Y  KI    + F  G +V++ ++ G++++A      M  + +VV+W+ 
Sbjct: 209 EGFEYFRRMREEY--KIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 264

Query: 231 MLRAYAENG 239
           +L A   +G
Sbjct: 265 LLGACTVHG 273



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 115/302 (38%), Gaps = 70/302 (23%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           A A K+       ++V WN  ++G+ + G    A+  +  M    ++ D  T +  L+A 
Sbjct: 40  ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 99

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           A    L LG+++H   +K G    +   N L+++Y++    CG   +  TL         
Sbjct: 100 AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR----CGRVEEAKTLF-------- 147

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                            ++ V  + VS T+LI     NG   EA  LF+           
Sbjct: 148 -----------------DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK----------- 179

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHA 516
                Y+ S              T G    EIT    + AC    M+K+G     +    
Sbjct: 180 -----YMES--------------TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
           Y ++   E   C    ++D+  + G +  A      +P  P+ V W T++  C  +G+ D
Sbjct: 221 YKIEPRIEHFGC----MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 276

Query: 576 LA 577
           LA
Sbjct: 277 LA 278


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 221/767 (28%), Positives = 357/767 (46%), Gaps = 134/767 (17%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           +L+  YS+ G+I +A+ +FD M++++++ W  ++  Y +N   +E  ++F  +       
Sbjct: 103 SLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM------- 155

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
                                             +  N + WN  +SGY+  G  + A E
Sbjct: 156 ----------------------------------SERNTISWNGLVSGYINNGMINEARE 181

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M   NV    V++   +        ++  + +     +    S  ++   L+    
Sbjct: 182 VFDRMPERNV----VSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ--- 234

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                      +  +    R    +PE                   D    T +I  YC+
Sbjct: 235 -----------EGRIDEACRLFDMMPE------------------KDVVTRTNMIGGYCQ 265

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G + EA  LF+     ++ +W  MI GY+ +     A +LF  M       +E++    
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAM 321

Query: 499 VKA-CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           +K    C  + +  +  +A  +KS     +   + ++  + + G +  A+ +F+ +   D
Sbjct: 322 LKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKD 376

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           +  W+ MI      G E  AL ++  M+  G+ P+  +   ++   + L  L+ GR+IHA
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHA 436

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L++     D +V   L+ MY KCGN+  A  +F +  +++ V+WN+++ G AQHG G E
Sbjct: 437 QLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE 496

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L++F DM   G+ PD VTF+GVLSACSYTG V +  E F+ M  KY +E ++EHY+ +V
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGRAG+  EA +LI  MP EA A +  ALLGACR     +  +  A+KL+ LEP ++ 
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAG 616

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---DLIFAKVEGL------------ 842
            ++LLSNI+A+  +WDDV   R  M+ + V K P     ++  KV               
Sbjct: 617 PFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHS 676

Query: 843 -IKRI--------KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PS 890
            I RI        +E GY PD  FVL DV+EEEK ++L YHSEKLA AYGL+  P   P 
Sbjct: 677 EINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPI 736

Query: 891 SVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            V+                  ++ +E +   ANRFHH +DG C C D
Sbjct: 737 RVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRD 783



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 257/583 (44%), Gaps = 92/583 (15%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N+L+T YSR G +  AR +FD+M D+++ISWNSI+A Y  +     +   E   +F  + 
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN-----KRPQEAQNMFDKMS 156

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E  T +                                  W+  VSG + N     G I 
Sbjct: 157 ERNTIS----------------------------------WNGLVSGYINN-----GMIN 177

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +FD M ER+VV W  M+R Y + G   E   LF  +    +     S   +LG + 
Sbjct: 178 EAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV----SWTVMLGGLL 233

Query: 272 DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
             G+  E      A +L       +VV     + GY QVG    A   F  M R NV   
Sbjct: 234 QEGRIDE------ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV--- 284

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
                                 +  TT+ +G+     V N  +++  K+  V     ++ 
Sbjct: 285 ----------------------VSWTTMITGY-----VQNQQVDIARKLFEVMP-EKNEV 316

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           +  ++L+  ++       S+  +   IK+    +     A+I  + +NG + +A  +F+ 
Sbjct: 317 SWTAMLKGYTNCGRLDEASELFNAMPIKSVVACN-----AMILCFGQNGEVPKARQVFDQ 371

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  TW+AMI  Y        ALELF  M   G R +  ++ + +  C  L  L  G
Sbjct: 372 MREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHG 431

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +++HA  ++S F+LD+ V+S +L MY+KCG +  A+ +F+     D V W ++I+G   +
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQH 491

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL-IKLDCSSDPFV 630
           G    AL ++H M  SG++PD+ TF  ++ A S    +++G +I  ++  K         
Sbjct: 492 GLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEH 551

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
              +VD+  + G + +A  L ++M M  + ++W A+L     H
Sbjct: 552 YACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 164/368 (44%), Gaps = 51/368 (13%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNS 82
           F +   RN+ S++  +  ++++   S + +   W    ++ +S + +L G     RI  +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLF-WQMPEKNVVSWTVMLGGLLQEGRIDEA 241

Query: 83  SQI------PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
            ++       D     N++  Y + G LV AR LFD+MP R+++SW +++  Y  + + +
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVD 301

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEF 195
                    + R L E +   + ++   +LK   + G +  ASE  +   +K        
Sbjct: 302 ---------IARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVV 347

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
              A++  + + G++ +A+ +FD M+E+D   W  M++ Y   G   +   LF  + R G
Sbjct: 348 ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREG 407

Query: 256 LCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNNNSN----- 296
           + P+  S+  VL V + L    H  ++ A  ++             L +Y    N     
Sbjct: 408 IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAK 467

Query: 297 ----------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                     VV+WN  ++GY Q G    A+  F +M  S +  D VTF+  L+A + T 
Sbjct: 468 QVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTG 527

Query: 347 NLNLGQQI 354
           N+  G +I
Sbjct: 528 NVKKGLEI 535



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%), Gaps = 43/359 (11%)

Query: 363 FYSA--VIVGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           FY +  +I  NSLI  YS++G +   R   D+    +++ + +S+  G   +K+      
Sbjct: 92  FYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNII-SWNSIVAGYFQNKRPQEAQN 150

Query: 419 KNDTVAD--SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             D +++  +     L+  Y  NG + EA  +F+     ++ +W AM+ GY+      +A
Sbjct: 151 MFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEA 210

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILD 535
             LF  M        E  + +     G LL  ++G+   A  +     E D+   + ++ 
Sbjct: 211 ETLFWQM-------PEKNVVSWTVMLGGLL--QEGRIDEACRLFDMMPEKDVVTRTNMIG 261

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            Y + G +V+A+ +F+++P  + V+WTTMI+G V N + D+A  ++       V+P+   
Sbjct: 262 GYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFE------VMPE--- 312

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI---------SLVDMYAKCGNIED 646
                K     TA+ +G   + N  +LD +S+ F  +         +++  + + G +  
Sbjct: 313 -----KNEVSWTAMLKG---YTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPK 364

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           A  +F QM  ++   W+AM+    + G   + L+LF  M+  G+ P+  + I VLS C+
Sbjct: 365 ARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCA 423



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 207/516 (40%), Gaps = 109/516 (21%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L++ Y   G +  AR +FD+MP+R+++SW +++  Y   G      ++E   LF  + 
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEG-----MISEAETLFWQMP 218

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E    +  + L  LL+     G +   E    + +      D      ++  Y + G++ 
Sbjct: 219 EKNVVSWTVMLGGLLQ----EGRI--DEACRLFDMMPEK--DVVTRTNMIGGYCQVGRLV 270

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ--CVLGV 269
           EA+ LFD M  R+VV W  M+  Y +N   +    LF       + P+   V    +L  
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF------EVMPEKNEVSWTAMLKG 324

Query: 270 ISDLGKRHE--EQVQAYAIK--------LLLYNNNSNVV---------------LWNKKL 304
            ++ G+  E  E   A  IK        +L +  N  V                 W+  +
Sbjct: 325 YTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMI 384

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
             Y + G    A+E F  M R  ++ +  + +  L+  AG  NL+ G++IH   ++S F 
Sbjct: 385 KVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFD 444

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
             V V + L++MY K    CG                     L  +KQ+         V 
Sbjct: 445 LDVYVASVLLSMYIK----CG--------------------NLAKAKQV----FDRFAVK 476

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  +  ++I  Y ++G   EA                               L +F  MH
Sbjct: 477 DVVMWNSIITGYAQHGLGVEA-------------------------------LRVFHDMH 505

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGA 542
            SG   D++T    + AC     +K+G ++   +M++ ++++  +   + ++D+  + G 
Sbjct: 506 FSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN-SMETKYQVEQKIEHYACMVDLLGRAGK 564

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           + +A  +   +P   D + W  ++  C  + + DLA
Sbjct: 565 LNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 19/212 (8%)

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           L +  CS+      SL+  Y++ G IE A ++F +M  +N + WN+++ G  Q+   +E 
Sbjct: 89  LNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEA 148

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             +F+ M     E +++++ G++S     G+++EA E F  M E+      V  ++ +V 
Sbjct: 149 QNMFDKMS----ERNTISWNGLVSGYINNGMINEAREVFDRMPER-----NVVSWTAMVR 199

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
              + G   EA  L   MP E +      +LG    +G  +     A +L  + P     
Sbjct: 200 GYVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRIDE----ACRLFDMMP--EKD 252

Query: 799 YVLLSNIFAAANQWDDVTSAR---GEMKRKNV 827
            V  +N+     Q   +  AR    EM R+NV
Sbjct: 253 VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV 284


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 182/527 (34%), Positives = 286/527 (54%), Gaps = 57/527 (10%)

Query: 448 LFENKDGFDLATWNAMIFGYIL------SNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           LF N       + +A +F  ++      +++   AL  ++ M       ++ T    +KA
Sbjct: 177 LFPNDQTTPPPSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKA 236

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC-----GAMVDAQSIFNDIPAP 556
           C  ++ L+ G  +HA  +K GFE D  V + ++ MY  C        V A+ +F++ P  
Sbjct: 237 CAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVK 296

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           D V W+ MI G    G    A++++ +M+++GV PDE T   ++ A + L ALE G+ + 
Sbjct: 297 DSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLE 356

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           + + + +      +  +L+DM+AKCG+++ A  +F++M +R  V W +M+VGLA HG G 
Sbjct: 357 SYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGL 416

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           E + +F++M   GV+PD V FIGVLSACS++GLV + +  F+ M   + I P++EHY  +
Sbjct: 417 EAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCM 476

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD L RAGR  EA E + +MP E +  + R+++ AC  +G+ + G+ VA++L+  EP   
Sbjct: 477 VDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHE 536

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADL---------------------- 834
           S YVLLSNI+A   +W+  T  R  M  K ++K P                         
Sbjct: 537 SNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYK 596

Query: 835 -IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I+  VE + + IK  GYVP T  VLLD++EE+KE ALY HSEKLA A+ L+STPP + I
Sbjct: 597 EIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPI 656

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                + N+E +    NRFHH ++G+C C D
Sbjct: 657 RIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 703



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 14/305 (4%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC---RNGSMA-- 443
           ++FT   VL+A + +   L L   +H   +K     D  V   L+ +YC   ++GS    
Sbjct: 226 NKFTFPFVLKACAGMMR-LELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPV 284

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A+ +F+     D  TW+AMI GY  + NS +A+ LF  M  +G   DEIT+ + + AC 
Sbjct: 285 SAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACA 344

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L+ GK + +Y  +      + + + ++DM+ KCG +  A  +F ++     V+WT+
Sbjct: 345 DLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTS 404

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI G   +G    A+ ++ +M   GV PD+  F  ++ A S    +++G   + N ++  
Sbjct: 405 MIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKG-HYYFNTMENM 463

Query: 624 CSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLK 680
            S  P +     +VDM ++ G + +A    + M +  N V+W +++   A H  GE  LK
Sbjct: 464 FSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVT--ACHARGE--LK 519

Query: 681 LFEDM 685
           L E +
Sbjct: 520 LGESV 524



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 31/277 (11%)

Query: 23  FTKDTYRNLPS-----FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSD--------- 68
           F  D     PS     F+  +  F Q +H S   +   + ++ RHA+S +          
Sbjct: 178 FPNDQTTPPPSHDAFLFNTLIRAFAQTTH-SKPHALRFYNTMRRHAVSPNKFTFPFVLKA 236

Query: 69  ------LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-----GSLVYARRLFDKMPDR 117
                 L LG + HA ++      D  + N L+ MY  C        V A+++FD+ P +
Sbjct: 237 CAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVK 296

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ++W++++  YA +G     N      LFR ++ +      +T+  +L  C   G +  
Sbjct: 297 DSVTWSAMIGGYARAG-----NSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALEL 351

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +  Y  +  ++    +  AL+++++K G +  A  +F  M+ R +V W  M+   A 
Sbjct: 352 GKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAM 411

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G G E   +F ++   G+ PDD +   VL   S  G
Sbjct: 412 HGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSG 448



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 16/233 (6%)

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           P  D   +N+++ A+A +            R + ++R      ++ T   +LK C     
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPH----ALRFYNTMRRHAVSPNKFTFPFVLKACAGMMR 242

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIY------SKFGKIREAKFLFDGMQERDVVLW 228
           +     VH   +K G   D  V   LV++Y         G +  AK +FD    +D V W
Sbjct: 243 LELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPV-SAKKVFDESPVKDSVTW 301

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK 287
             M+  YA  G       LF ++  +G+CPD+ ++  VL   +DLG     + +++Y  +
Sbjct: 302 SAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIER 361

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVAL 339
               N   +V L N  +  + + GD   A++ F  M +R+ V + S+   +A+
Sbjct: 362 ---KNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAM 411



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 22/198 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LGK   + I   + +    L N L+ M+++CG +  A ++F +M  R
Sbjct: 338 SVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVR 397

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
            ++SW S++   A  G G      E   +F  + E       +    +L  C  SG    
Sbjct: 398 TIVSWTSMIVGLAMHGRG-----LEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDK 452

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
              Y    E +     KI         G +V++ S+ G++ EA      M  E + V+W+
Sbjct: 453 GHYYFNTMENMFSIVPKIEHY------GCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWR 506

Query: 230 VMLRAYAENG---FGEEV 244
            ++ A    G    GE V
Sbjct: 507 SIVTACHARGELKLGESV 524



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 83/448 (18%), Positives = 159/448 (35%), Gaps = 104/448 (23%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK-FLFDGMQ-----ERDVVLWKVMLRA 234
           +H   LK+GL  +  V        S F  +  A   LF   Q       D  L+  ++RA
Sbjct: 141 IHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIRA 200

Query: 235 YAENGFGE-EVFHLFVDLHRSGLCPDDESVQCVLGVISDL------GKRHEEQVQ----- 282
           +A+    +      +  + R  + P+  +   VL   + +      G  H   V+     
Sbjct: 201 FAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEE 260

Query: 283 -----------------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
                                    A K+   +   + V W+  + GY + G++  A+  
Sbjct: 261 DPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTL 320

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F  M  + V  D +T +  L+A A    L LG+ +     +     +V + N+LI+M++K
Sbjct: 321 FREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAK 380

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
            G                     +   + + +++ V  I +         T++I     +
Sbjct: 381 CG--------------------DVDRAVKVFREMKVRTIVS--------WTSMIVGLAMH 412

Query: 440 GSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           G   EA  +F+   + G D    + + F  +LS  SH  L    H + +    +  +I  
Sbjct: 413 GRGLEAVLVFDEMMEQGVDP---DDVAFIGVLSACSHSGLVDKGHYYFNTME-NMFSIVP 468

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-P 556
            ++  GC+                            +DM  + G + +A      +P  P
Sbjct: 469 KIEHYGCM----------------------------VDMLSRAGRVNEALEFVRAMPVEP 500

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQM 584
           + V W ++++ C   GE  L  S+  ++
Sbjct: 501 NQVIWRSIVTACHARGELKLGESVAKEL 528


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 221/767 (28%), Positives = 357/767 (46%), Gaps = 134/767 (17%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           +L+  YS+ G+I +A+ +FD M++++++ W  ++  Y +N   +E  ++F  +       
Sbjct: 103 SLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM------- 155

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
                                             +  N + WN  +SGY+  G  + A E
Sbjct: 156 ----------------------------------SERNTISWNGLVSGYINNGMINEARE 181

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M   NV    V++   +        ++  + +     +    S  ++   L+    
Sbjct: 182 VFDRMPERNV----VSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ--- 234

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                      +  +    R    +PE                   D    T +I  YC+
Sbjct: 235 -----------EGRIDEACRLFDMMPE------------------KDVVTRTNMIGGYCQ 265

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G + EA  LF+     ++ +W  MI GY+ +     A +LF  M       +E++    
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAM 321

Query: 499 VKA-CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           +K    C  + +  +  +A  +KS     +   + ++  + + G +  A+ +F+ +   D
Sbjct: 322 LKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKD 376

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           +  W+ MI      G E  AL ++  M+  G+ P+  +   ++   + L  L+ GR+IHA
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHA 436

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L++     D +V   L+ MY KCGN+  A  +F +  +++ V+WN+++ G AQHG G E
Sbjct: 437 QLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE 496

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L++F DM   G+ PD VTF+GVLSACSYTG V +  E F+ M  KY +E ++EHY+ +V
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGRAG+  EA +LI  MP EA A +  ALLGACR     +  +  A+KL+ LEP ++ 
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAG 616

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---DLIFAKVEGL------------ 842
            ++LLSNI+A+  +WDDV   R  M+ + V K P     ++  KV               
Sbjct: 617 PFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHS 676

Query: 843 -IKRI--------KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PS 890
            I RI        +E GY PD  FVL DV+EEEK ++L YHSEKLA AYGL+  P   P 
Sbjct: 677 EINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPI 736

Query: 891 SVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            V+                  ++ +E +   ANRFHH +DG C C D
Sbjct: 737 RVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRD 783



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 257/583 (44%), Gaps = 92/583 (15%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N+L+T YSR G +  AR +FD+M D+++ISWNSI+A Y  +     +   E   +F  + 
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN-----KRPQEAQNMFDKMS 156

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E  T +                                  W+  VSG + N     G I 
Sbjct: 157 ERNTIS----------------------------------WNGLVSGYINN-----GMIN 177

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +FD M ER+VV W  M+R Y + G   E   LF  +    +     S   +LG + 
Sbjct: 178 EAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV----SWTVMLGGLL 233

Query: 272 DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
             G+  E      A +L       +VV     + GY QVG    A   F  M R NV   
Sbjct: 234 QEGRIDE------ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV--- 284

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
                                 +  TT+ +G+     V N  +++  K+  V     ++ 
Sbjct: 285 ----------------------VSWTTMITGY-----VQNQQVDIARKLFEVMP-EKNEV 316

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           +  ++L+  ++       S+  +   IK+    +     A+I  + +NG + +A  +F+ 
Sbjct: 317 SWTAMLKGYTNCGRLDEASELFNAMPIKSVVACN-----AMILCFGQNGEVPKARQVFDQ 371

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  TW+AMI  Y        ALELF  M   G R +  ++ + +  C  L  L  G
Sbjct: 372 MREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHG 431

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +++HA  ++S F+LD+ V+S +L MY+KCG +  A+ +F+     D V W ++I+G   +
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQH 491

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL-IKLDCSSDPFV 630
           G    AL ++H M  SG++PD+ TF  ++ A S    +++G +I  ++  K         
Sbjct: 492 GLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEH 551

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
              +VD+  + G + +A  L ++M M  + ++W A+L     H
Sbjct: 552 YACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 164/368 (44%), Gaps = 51/368 (13%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNS 82
           F +   RN+ S++  +  ++++   S + +   W    ++ +S + +L G     RI  +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLF-WQMPEKNVVSWTVMLGGLLQEGRIDEA 241

Query: 83  SQI------PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
            ++       D     N++  Y + G LV AR LFD+MP R+++SW +++  Y  + + +
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVD 301

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEF 195
                    + R L E +   + ++   +LK   + G +  ASE  +   +K        
Sbjct: 302 ---------IARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVV 347

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
              A++  + + G++ +A+ +FD M+E+D   W  M++ Y   G   +   LF  + R G
Sbjct: 348 ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREG 407

Query: 256 LCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNNNSN----- 296
           + P+  S+  VL V + L    H  ++ A  ++             L +Y    N     
Sbjct: 408 IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAK 467

Query: 297 ----------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
                     VV+WN  ++GY Q G    A+  F +M  S +  D VTF+  L+A + T 
Sbjct: 468 QVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTG 527

Query: 347 NLNLGQQI 354
           N+  G +I
Sbjct: 528 NVKKGLEI 535



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%), Gaps = 43/359 (11%)

Query: 363 FYSA--VIVGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           FY +  +I  NSLI  YS++G +   R   D+    +++ + +S+  G   +K+      
Sbjct: 92  FYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNII-SWNSIVAGYFQNKRPQEAQN 150

Query: 419 KNDTVAD--SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
             D +++  +     L+  Y  NG + EA  +F+     ++ +W AM+ GY+      +A
Sbjct: 151 MFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEA 210

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCVSSGILD 535
             LF  M        E  + +     G LL  ++G+   A  +     E D+   + ++ 
Sbjct: 211 ETLFWQM-------PEKNVVSWTVMLGGLL--QEGRIDEACRLFDMMPEKDVVTRTNMIG 261

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            Y + G +V+A+ +F+++P  + V+WTTMI+G V N + D+A  ++       V+P+   
Sbjct: 262 GYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFE------VMPE--- 312

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI---------SLVDMYAKCGNIED 646
                K     TA+ +G   + N  +LD +S+ F  +         +++  + + G +  
Sbjct: 313 -----KNEVSWTAMLKG---YTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPK 364

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           A  +F QM  ++   W+AM+    + G   + L+LF  M+  G+ P+  + I VLS C+
Sbjct: 365 ARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCA 423



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 207/516 (40%), Gaps = 109/516 (21%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L++ Y   G +  AR +FD+MP+R+++SW +++  Y   G      ++E   LF  + 
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEG-----MISEAETLFWQMP 218

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E    +  + L  LL+     G +   E    + +      D      ++  Y + G++ 
Sbjct: 219 EKNVVSWTVMLGGLLQ----EGRI--DEACRLFDMMPEK--DVVTRTNMIGGYCQVGRLV 270

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ--CVLGV 269
           EA+ LFD M  R+VV W  M+  Y +N   +    LF       + P+   V    +L  
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF------EVMPEKNEVSWTAMLKG 324

Query: 270 ISDLGKRHE--EQVQAYAIK--------LLLYNNNSNVV---------------LWNKKL 304
            ++ G+  E  E   A  IK        +L +  N  V                 W+  +
Sbjct: 325 YTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMI 384

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
             Y + G    A+E F  M R  ++ +  + +  L+  AG  NL+ G++IH   ++S F 
Sbjct: 385 KVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFD 444

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
             V V + L++MY K    CG                     L  +KQ+         V 
Sbjct: 445 LDVYVASVLLSMYIK----CG--------------------NLAKAKQV----FDRFAVK 476

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D  +  ++I  Y ++G   EA                               L +F  MH
Sbjct: 477 DVVMWNSIITGYAQHGLGVEA-------------------------------LRVFHDMH 505

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGA 542
            SG   D++T    + AC     +K+G ++   +M++ ++++  +   + ++D+  + G 
Sbjct: 506 FSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN-SMETKYQVEQKIEHYACMVDLLGRAGK 564

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           + +A  +   +P   D + W  ++  C  + + DLA
Sbjct: 565 LNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 19/212 (8%)

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           L +  CS+      SL+  Y++ G IE A ++F +M  +N + WN+++ G  Q+   +E 
Sbjct: 89  LNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEA 148

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             +F+ M     E +++++ G++S     G+++EA E F  M E+      V  ++ +V 
Sbjct: 149 QNMFDKMS----ERNTISWNGLVSGYINNGMINEAREVFDRMPER-----NVVSWTAMVR 199

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
              + G   EA  L   MP E +      +LG    +G  +     A +L  + P     
Sbjct: 200 GYVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRIDE----ACRLFDMMP--EKD 252

Query: 799 YVLLSNIFAAANQWDDVTSAR---GEMKRKNV 827
            V  +N+     Q   +  AR    EM R+NV
Sbjct: 253 VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV 284


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 191/595 (32%), Positives = 296/595 (49%), Gaps = 52/595 (8%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           + W   +SGY+   D+  A+  F NM + S ++ D     +A  A     ++N G+ +HG
Sbjct: 81  ISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHG 140

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------------------CVCGL-------- 386
             +K+G  ++V VG++L++MY+K G                       + GL        
Sbjct: 141 YAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKE 200

Query: 387 -------------RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                          D +T A  L+A +     L+  ++IH  A+K      SFV+  L 
Sbjct: 201 ALVYFSEMWRSRVEYDSYTFAIALKACAD-SGALNYGREIHAQAMKKGFDVSSFVANTLA 259

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y + G +     LFE     D+ +W  +I   +       A++ F  M  S    +E 
Sbjct: 260 TMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEY 319

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T A  +  C  L  ++ G+Q+HA  +  G    L V + I+ MY KCG +  +  IF+++
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D V+W+T+I+G    G    A  +   MR+ G  P EF  A ++ A   +  LE G+
Sbjct: 380 TRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q+HA ++ +       V  +L++MY KCG+IE+A  +F   +  + V W AM+ G A+HG
Sbjct: 440 QLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHG 499

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
              E + LFE +   G+ PDSVTFIGVLSACS+ GLV   +  F+ M +KY I P  EHY
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHY 559

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             ++D L RAGR  +A  +I +MPF     +   LL ACRV GD E G+  AE+++ LEP
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEP 619

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFAKVEG 841
             +  ++ L+NI+A+  +W +    R  MK K V K+P        DL+FA V G
Sbjct: 620 NCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAG 674



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 214/407 (52%), Gaps = 3/407 (0%)

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
           D ++   +I  TTL SG+ +A     +L+ ++  M    GLR D F L S+   +  L  
Sbjct: 73  DKMSQKDEISWTTLISGYVNANDSSEALL-LFKNMRVESGLRIDPFIL-SLAHKACGLNS 130

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            ++  + +H +A+K   V   FV +AL+D+Y +NG + E   +F      ++ +W A+I 
Sbjct: 131 DVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIIT 190

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           G + +  + +AL  FS M  S    D  T A A+KAC     L  G+++HA AMK GF++
Sbjct: 191 GLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 250

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
              V++ +  MY KCG +    ++F  +   D V+WTT+I+  V  G+E+ A+  + +MR
Sbjct: 251 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 310

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
            S V P+E+TFA ++   + L  +E G Q+HA ++ L  ++   V  S++ MYAKCG + 
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            + ++F +M  R+ V W+ ++ G +Q G+  E  +L   M+  G +P       VLSAC 
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 430

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
              ++ E  +  H      G+E      S L++   + G  +EA  +
Sbjct: 431 NMAIL-EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 171/718 (23%), Positives = 304/718 (42%), Gaps = 138/718 (19%)

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           S +   ++ + +P+   +N  +    + G L  ARR+FDKM  +D ISW ++++ Y    
Sbjct: 38  SQNIHFISQTDLPE---SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYV--- 91

Query: 134 EGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
             NA + +E   LF+++R ES        L+   K C  +  V   E +HGYA+K GLV 
Sbjct: 92  --NANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVN 149

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
             FV  AL+++Y+K GKI E + +F  M  R+VV W  ++      G+ +E    F ++ 
Sbjct: 150 SVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMW 209

Query: 253 RSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------------------ 287
           RS +  D  +    L   +D G   +  ++ A A+K                        
Sbjct: 210 RSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLE 269

Query: 288 --LLLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             L L+   S  +VV W   ++  +Q+G    A++ F+ M  S+V  +  TF   ++  A
Sbjct: 270 YGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCA 329

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------- 384
               +  G+Q+H   L  G  +++ V NS++ MY+K G +                    
Sbjct: 330 NLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWST 389

Query: 385 ------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                   G +  +F LASVL A  ++    H  KQ+H + +  
Sbjct: 390 IIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH-GKQLHAYVLSI 448

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                + V +ALI++YC+ GS+ EA  +F+  +  D+ +W AMI GY     S + ++LF
Sbjct: 449 GLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLF 508

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYV 538
             +   G R D +T    + AC    ++  G + +  AM   +++         ++D+  
Sbjct: 509 EKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFR-YFNAMSKKYQISPSKEHYGCMIDLLC 567

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
           + G + DA+ +   +P   DDV W+T++  C  +G+                        
Sbjct: 568 RAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGD------------------------ 603

Query: 598 ILVKASSCLTALEQGRQIHANLIKLD--CSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
                      +E+GR+    +++L+  C+      I+L ++YA  G   +A  + K M 
Sbjct: 604 -----------VERGRRTAERILQLEPNCAG---THITLANIYASKGKWREAADIRKLMK 649

Query: 656 MRNTVL---WN---------AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
            +  +    W+         A + G   H  GE+   + + + +     D V   G L
Sbjct: 650 SKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFL 707



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 10/211 (4%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA IL+        + N++MTMY++CG L  +  +F +M  RD++SW++I+A Y+ 
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ 396

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     +V+E F L   +R      +   LA +L  C +   +   + +H Y L IGL 
Sbjct: 397 GG-----HVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLE 451

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V  AL+N+Y K G I EA  +FD  +  D+V W  M+  YAE+G+  EV  LF  +
Sbjct: 452 HTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKI 511

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRH 277
            R GL PD  +   VL   S     DLG R+
Sbjct: 512 PRVGLRPDSVTFIGVLSACSHAGLVDLGFRY 542



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 35/325 (10%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           F+I   A + S  L  G+  HA+ +        F+ N L TMY++CG L Y   LF+KM 
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            RD++SW +I+      G+          + F  +RES    +  T A ++  C +   +
Sbjct: 280 MRDVVSWTTIITTLVQMGQEEC-----AVQAFIRMRESDVSPNEYTFAAVISGCANLARI 334

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              E +H   L +GL     V  +++ +Y+K G++  +  +F  M  RD+V W  ++  Y
Sbjct: 335 EWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGY 394

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN- 293
           ++ G   E F L   +   G  P + ++  VL    ++    H +Q+ AY + + L +  
Sbjct: 395 SQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA 454

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                      N ++V W   ++GY + G +   I+ F  + R 
Sbjct: 455 MVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRV 514

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLG 351
            ++ DSVTF+  L+A +    ++LG
Sbjct: 515 GLRPDSVTFIGVLSACSHAGLVDLG 539



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 2/163 (1%)

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFI 698
           K G++ +A  +F +M  ++ + W  ++ G     +  E L LF++M+   G+  D     
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
               AC     V+   E  H    K G+   V   S L+D   + G+  E   +   MP 
Sbjct: 121 LAHKACGLNSDVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
               S    + G  R   + E   + +E   +   +DS  + +
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAI 222


>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 235/824 (28%), Positives = 406/824 (49%), Gaps = 78/824 (9%)

Query: 58   SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
            ++L+  ++ S +  G   H   L    +  + L   L+ +Y++ G+L Y  +LF +M  R
Sbjct: 976  ALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQR 1035

Query: 118  DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE-SITFTSRLTLAPLLKLCLSSGYVW 176
            D + WN +L+  A    G   +  E  RLFR++   +    + +T+A +L +C       
Sbjct: 1036 DPVIWNIVLSGLA----GFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRED- 1090

Query: 177  ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI-REAKFLFDGMQERDVVLWKVMLRAY 235
            A ++VH Y +K GL        AL+++Y+K G +  +A   F+ ++ +DVV W  ++  +
Sbjct: 1091 AGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGF 1150

Query: 236  AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL----GKRHEEQVQAYAIKLLLY 291
            +EN F EE F LF  + +  + P+  ++  +L V + L    G R+ ++V  + ++ +  
Sbjct: 1151 SENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMEL 1210

Query: 292  NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
              + +V+  N  +S YL++     A   F NM       D V++   +A  A        
Sbjct: 1211 VEDVSVI--NSLMSFYLRIXQMEKAEFLFRNM----KSRDLVSWNAIIAGYAS------- 1257

Query: 352  QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
               +G  LK+            + ++S+   +  ++ D  TL SVL A + +   L ++K
Sbjct: 1258 ---NGEWLKA------------LELFSEFISLETIKPDSVTLVSVLPACAHV-HNLQVAK 1301

Query: 412  QIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
             IH + I++  +  D+ V  AL+  Y +      A   F      DL +WNA++  +  S
Sbjct: 1302 GIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTES 1361

Query: 471  NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF---ELDL 527
                  + L   M   G R D ITI T ++    +  +K+ K+ H+Y+++ G    +   
Sbjct: 1362 GCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXP 1421

Query: 528  CVSSGILDMYVKCGAMV--------------------------------DAQSIFNDIPA 555
             + +G+LD Y KCG M                                 DA +IFN +  
Sbjct: 1422 TLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSE 1481

Query: 556  PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
             D   W  M+    +N   D ALS++H+++  G+ PD  T   ++ A + + ++   RQ 
Sbjct: 1482 TDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQC 1541

Query: 616  HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
            H  +I+  C +D  +  + +DMY+KCG++  AY LF     ++ V++ AM+ G A HG G
Sbjct: 1542 HGYVIRA-CFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 1600

Query: 676  EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            EE L++F  M   GV+PD V    VL ACS+ GLV E ++ F+ + + +G +P +E Y+ 
Sbjct: 1601 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYAC 1660

Query: 736  LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
            +VD L R GR K+A   +  MP EA+A++   LLGACR   + E G+ VA+ L  +E  +
Sbjct: 1661 VVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 1720

Query: 796  SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKV 839
               YV++SN++AA  +WD V   R  M+ + +KK PA   + +V
Sbjct: 1721 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKK-PAGCSWIEV 1763



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 171/667 (25%), Positives = 295/667 (44%), Gaps = 88/667 (13%)

Query: 162  LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            LA LLK C++   +     +HGYALK+G V  + +   L+N+Y+K G +     LF  M 
Sbjct: 974  LAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMD 1033

Query: 222  ERDVVLWKVMLRAYAENGFGE---EVFHLFVDLHRSGLC-PDDESVQCVLGVISDLGKRH 277
            +RD V+W ++L   A  GF     EV  LF  +H      P+  ++  VL V + L +  
Sbjct: 1034 QRDPVIWNIVLSGLA--GFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLREDA 1091

Query: 278  EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
             + V +Y IK  L    S+ +  N  +S Y + G                        LV
Sbjct: 1092 GKSVHSYVIKSGL---ESHTLAGNALISMYAKCG------------------------LV 1124

Query: 338  ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
               A A  + +     +    + +GF        +    ++ +     ++ +  T+AS+L
Sbjct: 1125 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGP--IQPNYATIASIL 1182

Query: 398  RASSSLPE--GLHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
               +SL E  G    K++H H ++  + V D  V  +L+  Y R   M +AE+LF N   
Sbjct: 1183 PVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKS 1242

Query: 455  FDLATWNAMIFGYILSNNSHKALELFSH-MHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             DL +WNA+I GY  +    KALELFS  +     + D +T+ + + AC  +  L+  K 
Sbjct: 1243 RDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKG 1302

Query: 514  MHAYAMK-SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +H Y ++  G   D  V + +L  Y KC     A   F  I   D ++W  ++    ++G
Sbjct: 1303 IHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESG 1362

Query: 573  EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPF 629
             E   +++ H M   G+ PD  T   +++  + ++ +++ ++ H+  I+   L   + P 
Sbjct: 1363 CETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPT 1422

Query: 630  VGISLVDMYAKCGNI--------------------------------EDAYILFKQMDMR 657
            +G  ++D YAKCGN+                                +DAY +F  M   
Sbjct: 1423 LGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSET 1482

Query: 658  NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
            +   WN M+   A++   ++ L LF +++  G++PD VT + +L AC++   V       
Sbjct: 1483 DLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASV------- 1535

Query: 718  HLMREKYGIE-----PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            H++R+ +G        +V      +D   + G    A +L LS P +    M  A++G  
Sbjct: 1536 HMLRQCHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGF 1594

Query: 773  RVQGDTE 779
             + G  E
Sbjct: 1595 AMHGMGE 1601



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 6/176 (3%)

Query: 573  EEDLALSIY-HQMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
            + D ALS++  ++R S G  P+    A L+K+    +A+  G  +H   +KL   S   +
Sbjct: 949  KHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSL 1008

Query: 631  GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE-ETLKLFEDMK-AH 688
               L+++YAK G ++    LF +MD R+ V+WN +L GLA   + E E ++LF  M   +
Sbjct: 1009 CKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVN 1068

Query: 689  GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
              +P+SVT   VL  C+   L  +A ++ H    K G+E      + L+    + G
Sbjct: 1069 EAKPNSVTIAIVLPVCAR--LREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCG 1122


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 205/599 (34%), Positives = 299/599 (49%), Gaps = 65/599 (10%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I ++  M    G R D  T+ +VL A + L E L L  QI   AIK    +   + T LI
Sbjct: 15  IRVFGDMVLGNGPRFDLTTVIAVLPAVAELQE-LKLGMQILCLAIKCGFYSHVSLLTGLI 73

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            ++ + G +  A  LF      DL + NAMI G+  +  +  ++ LF  + +SGER+   
Sbjct: 74  SLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSS 133

Query: 494 TIATAVKA---------CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
           TI   +           C C+         H + +K G      VS+ +  +Y +   M+
Sbjct: 134 TIVGLIPVYSPFGHSYLCNCI---------HGFCVKLGIVSHSSVSTALTTVYCRLNEMI 184

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A+ +F++       +W  MISGC  NG  D A+S++  M+ + V P+  T   ++ A +
Sbjct: 185 FARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACA 244

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            + AL  G  +H+ +      S+ +V  +L+DMYAKCG+I  A  LF  M  +N V WNA
Sbjct: 245 QIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNA 304

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           M+ G   HG+G+E LKLF DM +  V+P  +TF+ VL ACS+ GLV E    FH M   +
Sbjct: 305 MISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDF 364

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV 784
           G EP  EHY+ +VD LGRAG+ K+A E I +MP E    +  ALLGAC +  DT      
Sbjct: 365 GFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVA 424

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------- 831
           +EKL  L+P +   YVL+SNI++   ++    S R   K+K + K P             
Sbjct: 425 SEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHV 484

Query: 832 ----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
                     +  I+A+++ L  ++ E G+  +T  VL D+EEEEKE  +  HSEKLA A
Sbjct: 485 FTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIA 544

Query: 882 YGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           +GLIST P + I   K                           ANRFHH +DG+C C D
Sbjct: 545 FGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGD 603



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 205/449 (45%), Gaps = 57/449 (12%)

Query: 304 LSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
           +SG+++      +I  F +M+  N  ++D  T +  L AVA    L LG QI    +K G
Sbjct: 2   ISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCG 61

Query: 363 FYSAVIVGNSLINMYSKMGCV-----------------CGLRTDQFT------------- 392
           FYS V +   LI+++SK G V                 C      FT             
Sbjct: 62  FYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFK 121

Query: 393 --LASVLRASSSLPEGL----------HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
             L+S  R SSS   GL          +L   IH   +K   V+ S VSTAL  VYCR  
Sbjct: 122 ELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLN 181

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            M  A  LF+      LA+WNAMI G   +  +  A+ LF  M  +    + +T+ + + 
Sbjct: 182 EMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILS 241

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  +  L  G+ +H+    + FE ++ VS+ ++DMY KCG++  A+ +F+ +P  ++V 
Sbjct: 242 ACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVT 301

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  MISG   +G    AL +++ M  S V P   TF  ++ A S    +++G  I   ++
Sbjct: 302 WNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMV 361

Query: 621 KLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE- 676
             D   +P       +VD+  + G ++ A    K M +     +W A+L     H +   
Sbjct: 362 H-DFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 677 ---ETLKLFEDMKAHGVEPDSVTFIGVLS 702
               + KLFE      ++P+++ +  ++S
Sbjct: 421 AHVASEKLFE------LDPENIGYYVLMS 443



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 34/297 (11%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L   L++++S+CG +  AR LF ++  +DLIS N++++ +  +GE       +  RLF+ 
Sbjct: 68  LLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGE-----TEDSVRLFKE 122

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L  S    S  T+  L+ +    G+ +    +HG+ +K+G+V    VS AL  +Y +  +
Sbjct: 123 LLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNE 182

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           +  A+ LFD   E+ +  W  M+    +NG  +    LF  + ++ + P+  +V  +L  
Sbjct: 183 MIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSA 242

Query: 270 ISDLG--------------KRHEEQVQAYAIKLLLYNN---------------NSNVVLW 300
            + +G               R E  V      + +Y                   N V W
Sbjct: 243 CAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTW 302

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           N  +SGY   G    A++ F +M+ S+V+   +TFL  L A +    +  G  I  T
Sbjct: 303 NAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHT 359



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/424 (21%), Positives = 168/424 (39%), Gaps = 90/424 (21%)

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           A+K G      +   L++++SK G++  A+ LF  ++++D++    M+  +  NG  E+ 
Sbjct: 57  AIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDS 116

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNS-------- 295
             LF +L  SG      ++  ++ V S  G  +    +  + +KL + +++S        
Sbjct: 117 VRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTV 176

Query: 296 --------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                                +  WN  +SG  Q G    AI  F  M ++NV  + VT 
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
              L+A A    L+LG+ +H     + F S V V  +LI+MY+K G +   R + F L  
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVAR-ELFDL-- 293

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
                  +PE             KN+   ++ +S                          
Sbjct: 294 -------MPE-------------KNEVTWNAMIS-------------------------- 307

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM- 514
                     GY L  +  +AL+LF  M +S  +   +T  + + AC    ++K+G  + 
Sbjct: 308 ----------GYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIF 357

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGE 573
           H      GFE      + ++D+  + G +  A      +P  P    W  ++  C+ + +
Sbjct: 358 HTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKD 417

Query: 574 EDLA 577
            +LA
Sbjct: 418 TNLA 421



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 9/210 (4%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T   L   ++SL   +QK++ + +  +    SIL        L LG+  H+ I ++    
Sbjct: 209 TQNGLTDAAISLFQTMQKNNVNPNPVTVT--SILSACAQIGALSLGEWVHSLIKSNRFES 266

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           + +++  L+ MY++CGS+  AR LFD MP+++ ++WN++++ Y   G G      E  +L
Sbjct: 267 NVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQ-----EALKL 321

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV-HGYALKIGLVWDEFVSGALVNIYS 205
           F  +  S    + LT   +L  C  +G V   + + H      G          +V+I  
Sbjct: 322 FYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILG 381

Query: 206 KFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           + G++++A      M  E    +W  +L A
Sbjct: 382 RAGQLKKALEFIKAMPVEPGPPVWGALLGA 411


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 203/627 (32%), Positives = 325/627 (51%), Gaps = 49/627 (7%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A +L    +  N   W   ++G  + G      E F  M    +  D   +   L    G
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM----------------------GC 382
            D++ LG  +H   +  GF S   V  +L+NMY+K+                        
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243

Query: 383 VCG-----LRTDQFTLASVLRASSSLPEG---------------LHLSKQIHVHAIKNDT 422
           + G     L  D F L   +      P+                ++ +K++  +A++   
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFEN---KDGFDLATWNAMIFGYILSNNSHKALEL 479
            +++ V TALID+  + GS+ EA  +F +      F+ A WNAMI GY+ S  + KALEL
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFN-APWNAMISGYLRSGFNEKALEL 362

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILDMYV 538
           F+ M  +   LD  T  +   A   L  L  GK++HA A+KSG E++ + +S+ + + Y 
Sbjct: 363 FAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYA 422

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG++ D + +FN +   D ++WT++++      E D A+ I+  MR  G+ P++FTF+ 
Sbjct: 423 KCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSS 482

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ + + L  LE G+Q+H  + K+    D  +  +LVDMYAKCG + DA  +F ++   +
Sbjct: 483 VLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNAD 542

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
           TV W A++ G AQHG  ++ L+LF  M   GVEP++VTF+ VL ACS+ GLV E  + F 
Sbjct: 543 TVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFK 602

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
           LM++ YG+ PE+EHY+ +VD L R G   +A E I  MP E +  + + LLGACRV G+ 
Sbjct: 603 LMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNV 662

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAK 838
           E G+  A+K+++ +  +S+ YVLLSN +  +  + D  S R  MK + VKK+P    +  
Sbjct: 663 ELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPG-CSWIS 721

Query: 839 VEGLIKRIKEGGYV-PDTDFVLLDVEE 864
           V G + +   G    P+ D +   +EE
Sbjct: 722 VNGTLHKFYAGDQQHPEKDKIYAKLEE 748



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/600 (24%), Positives = 265/600 (44%), Gaps = 89/600 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +LR  +    L   K+ H  +L S  S      L N++   YS+C  +  A RLFD+M  
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+  SW  ++A  A +G        +GF  F  ++    F  +   + +L++C+    + 
Sbjct: 134 RNTFSWTVLIAGLAENGL-----FLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               VH   +  G     FVS AL+N+Y+K  +I ++  +F+ M E +VV W  M+  + 
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDES---VQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
            N    + F LF+ +   G+ PD ++   V   +G++ D+ K  E  V  YA++L + +N
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE--VSGYALELGVDSN 306

Query: 294 ------------------------NSNVVL------WNKKLSGYLQVGDNHGAIECFVNM 323
                                   NS+ +       WN  +SGYL+ G N  A+E F  M
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGC 382
            ++++  D  T+     A+A    L+LG+++H   +KSG   + V + N++ N Y+K G 
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426

Query: 383 V---------------------------C----------------GLRTDQFTLASVLRA 399
           +                           C                G+  +QFT +SVL +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            ++L   L   +Q+H    K     D  + +AL+D+Y + G + +A+ +F      D  +
Sbjct: 487 CANLCL-LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVS 545

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W A+I G+        AL+LF  M   G   + +T    + AC    ++++G Q      
Sbjct: 546 WTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMK 605

Query: 520 KS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           K+ G   ++   + I+D+  + G + DA    + +P  P+++ W T++  C  +G  +L 
Sbjct: 606 KTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELG 665



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 3/244 (1%)

Query: 508 LKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           LKQ K +H + +KS F     L + + +   Y KC  +  A  +F+ +   +  +WT +I
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G  +NG        + +M+  G+ PD+F ++ +++    L ++E G  +HA ++    +
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           S  FV  +L++MYAK   IED+Y +F  M   N V WNAM+ G   +    +   LF  M
Sbjct: 204 SHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM 263

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              GV PD+ TFIGV  A      V++A E      E  G++      + L+D   + G 
Sbjct: 264 MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALE-LGVDSNTLVGTALIDMNSKCGS 322

Query: 746 TKEA 749
            +EA
Sbjct: 323 LQEA 326



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 11/283 (3%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           VA ++   + ID  CR         LF+     +  +W  +I G   +       E F  
Sbjct: 111 VAHAYSKCSDIDAACR---------LFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCE 161

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M + G   D+   +  ++ C  L  ++ G  +HA  +  GF     VS+ +L+MY K   
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + D+  +FN +   + V+W  MI+G   N     A  ++ +M   GV PD  TF  + KA
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ--MDMRNTV 660
              L  + + +++    ++L   S+  VG +L+DM +KCG++++A  +F    +  R   
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            WNAM+ G  + G  E+ L+LF  M  + +  D  T+  V +A
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA 384


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 218/653 (33%), Positives = 327/653 (50%), Gaps = 78/653 (11%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+R  V  ++ TF  AL A +   + + G+ IH   + +G  + + V  +L++MY K  C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 383 -----------------------------------VCGLRTDQFTLASVLRASSSLPEGL 407
                                              V  L + Q  +  +   +S+L   L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 408 HLSKQ---------IHVHAI----------KNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
            L  Q         +H + I          K+       + TAL+D+Y + GS+  A  +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLM 507
           F+     +  TW+A+I G++L +   +A  LF  M   G   L   +IA+A++AC  L  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L+ G+Q+HA   KSG   DL   + +L MY K G +  A ++F+++   D V+++ ++SG
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            V NG  + A  ++ +M+   V PD  T   L+ A S L AL+ GR  H ++I    +S+
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +  +L+DMYAKCG I+ +  +F  M  R+ V WN M+ G   HG G+E   LF +M  
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G  PD VTFI +LSACS++GLV E    FH+M   YG+ P +EHY  +VD L R G   
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA E I SMP  A   +  ALLGACRV  + + GK V+  +  L P  +  +VLLSNI++
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 808 AANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIK 844
           AA ++D+    R   K +  KK P                       +  I+ +++ ++ 
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK 897
            IK+ GY PDT FVL D+EEEEKE+AL  HSEKLA AYG++S      I   K
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTK 653



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 218/558 (39%), Gaps = 118/558 (21%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L+   + +D   G++ H   +++    D F++  L+ MY +C  L  A  +F  MP RDL
Sbjct: 17  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 76

Query: 120 ISWNSILAAYAHSG---EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           ++WN++LA YAH G      A  ++   ++ R LR + +     TL  LL L    G + 
Sbjct: 77  VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR-LRPNAS-----TLVALLPLLAQQGALA 130

Query: 177 ASETVHGYALKIGL---------VWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVV 226
              +VH Y ++  L         + D  + G AL+++Y+K G +  A+ +FD M  R+ V
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 190

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-PDDESVQCVLGVISDLGK-RHEEQVQAY 284
            W  ++  +       + F LF  +   GLC     S+   L   + L   R  EQ+ A 
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 250

Query: 285 ----------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGA 316
                                       AI L       + V ++  +SGY+Q G    A
Sbjct: 251 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 310

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
              F  M   NV+ D+ T +  + A +    L  G+  HG+ +  G  S   + N+LI+M
Sbjct: 311 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 370

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           Y+K G     R D                   LS+Q+                       
Sbjct: 371 YAKCG-----RID-------------------LSRQV----------------------- 383

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
                       F      D+ +WN MI GY +     +A  LF  M+  G   D +T  
Sbjct: 384 ------------FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 431

Query: 497 TAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             + AC    ++ +GK       H Y +    E  +C    ++D+  + G + +A     
Sbjct: 432 CLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQ 487

Query: 552 DIPAPDDV-AWTTMISGC 568
            +P   DV  W  ++  C
Sbjct: 488 SMPLRADVRVWVALLGAC 505



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 5/223 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S +   S LR   S   L +G+  HA +  S    D    N+L++MY++ G +  A  LF
Sbjct: 224 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D+M  +D +S++++++ Y  +G        E F +F+ ++         T+  L+  C  
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAE-----EAFLVFKKMQACNVEPDAATMVSLIPACSH 338

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +      HG  +  GL  +  +  AL+++Y+K G+I  ++ +F+ M  RD+V W  M
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 398

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +  Y  +G G+E   LF++++  G  PD  +  C+L   S  G
Sbjct: 399 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 237/801 (29%), Positives = 378/801 (47%), Gaps = 131/801 (16%)

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS--NVVLW 300
           ++FH    L + GL  D  ++  ++    +LG R   +  ++A K +  N+ S     ++
Sbjct: 49  KMFHR--SLTKQGLDNDVSTITKLVARSCELGTR---ESLSFA-KEVFENSESYGTCFMY 102

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           N  + GY   G  + AI  F+ M+ S +  D  TF   L+A A +     G QIHG  +K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162

Query: 361 SGFYSAVIVGNSLINMYSKMG----------------------CVCGLRTDQF------- 391
            G+   + V NSL++ Y++ G                       +CG     F       
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222

Query: 392 ---------------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                          T+  V+ A + L E L   ++++     +    +  + +AL+D+Y
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKL-EDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            +  ++  A+ LF+     +L   NAM   Y+    + +AL +F+ M  SG R D I++ 
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           +A+ +C  L  +  GK  H Y +++GFE    + + ++DMY+KC     A  IF+ +   
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMR----------LSGVV---------------- 590
             V W ++++G V+NGE D A   +  M           +SG+V                
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461

Query: 591 ------PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
                  D  T   +  A   L AL+  + I+  + K     D  +G +LVDM+++CG+ 
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           E A  +F  +  R+   W A +  +A  GN E  ++LF+DM   G++PD V F+G L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ GLV +  E F+ M + +G+ PE  HY  +VD LGRAG  +EA +LI  MP E +  +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             +LL ACRVQG+ E   + AEK+  L P  + +YVLLSN++A+A +W+D+   R  MK 
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701

Query: 825 KNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           K ++K P                          I A ++ + +R    G+VPD   VL+D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPL 900
           V+E+EK   L  HSEKLA AYGLIS+   + I                     + N+E +
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821

Query: 901 YA--NRFHHLRDGMCPCADNC 919
               NRFH++R G C C D C
Sbjct: 822 LRDNNRFHYIRQGKCSCGDFC 842



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 230/537 (42%), Gaps = 62/537 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  I+      D F+ N+L+  Y+ CG L  AR++FD+M +R+++SW S++  YA 
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                A++  + F  FR +R+     + +T+  ++  C     +   E V+ +    G+ 
Sbjct: 213 --RDFAKDAVDLF--FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            ++ +  ALV++Y K   I  AK LFD     ++ L   M   Y   G   E   +F  +
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328

Query: 252 HRSGLCPDDESVQCVLGVISDL-----GKRHEEQV------------------------Q 282
             SG+ PD  S+   +   S L     GK     V                        Q
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
             A ++    +N  VV WN  ++GY++ G+   A E F  M   N+              
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI-------------- 434

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
                      +   T+ SG     +   + I ++  M    G+  D  T+ S+  A   
Sbjct: 435 -----------VSWNTIISGLVQGSLFEEA-IEVFCSMQSQEGVNADGVTMMSIASACGH 482

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L   L L+K I+ +  KN    D  + T L+D++ R G    A  +F +    D++ W A
Sbjct: 483 LG-ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-S 521
            I    ++ N+ +A+ELF  M   G + D +    A+ AC    +++QGK++    +K  
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           G   +      ++D+  + G + +A  +  D+P  P+DV W ++++ C   G  ++A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 49/316 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+  +A I NS    +  + + L+ MY +C ++  A+RLFD+    +L   N++ +
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y   G        E   +F  + +S     R+++   +  C     +   ++ HGY L+
Sbjct: 311 NYVRQGL-----TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365

Query: 188 IGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            G   WD  +  AL+++Y K  +   A  +FD M  + VV W  ++  Y ENG  +  + 
Sbjct: 366 NGFESWDN-ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
            F  +      P+                                    N+V WN  +SG
Sbjct: 425 TFETM------PE-----------------------------------KNIVSWNTIISG 443

Query: 307 YLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            +Q      AIE F +M  +  V  D VT +   +A      L+L + I+    K+G   
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503

Query: 366 AVIVGNSLINMYSKMG 381
            V +G +L++M+S+ G
Sbjct: 504 DVRLGTTLVDMFSRCG 519



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++L GKS H  +L +       + N L+ MY +C     A R+FD+M ++ +++WNSI+A
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411

Query: 128 AYAHSGEGNA----------ENVT----------------EGFRLFRSLRESITFTSR-L 160
            Y  +GE +A          +N+                 E   +F S++      +  +
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+  +   C   G +  ++ ++ Y  K G+  D  +   LV+++S+ G    A  +F+ +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
             RDV  W   + A A  G  E    LF D+   GL PD
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 212/691 (30%), Positives = 333/691 (48%), Gaps = 81/691 (11%)

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD------- 272
           M E +VV W   +   A  G  ++    F+ + R+G+ P+  +    +   +        
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 273 -------LGKRHEEQVQAYAIKLLLYNNNSNV---------------VLWNKKLSGYLQV 310
                  L K    Q+   +  + +Y+ +  +               V WN  ++GY Q 
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 311 GDNHGAIECFVNMIRSNVQY----DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           G N  A   F +MI S   +       T    L A  G     +G+ +HG  +K GF S 
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 367 VIVGNSLINMYSKMGCV--CGLRTDQF--------------------------------- 391
           + V  S + MY K G +   GL  DQ                                  
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 392 --------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
                   T   VL+AS+++ +   + +  H   +K     D FV+TAL+D+Y +   + 
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDS-AVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           + E  F      +L ++NA+I GY L     +AL ++S + + G   D  T      +C 
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
               + +G Q+H +++K G + D+ V + I++ Y KCG    A   F  I  P+ V W  
Sbjct: 360 VSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-- 621
           +ISG   NGE + AL  + +MR      DEF+ + ++KA S   A+EQGR +HA+++K  
Sbjct: 420 IISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSG 479

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
           LDC+   +VG +++DMY+KCG +EDA  +F  M  +N V WN+M+ G AQ+G  +E L L
Sbjct: 480 LDCT--IYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLL 537

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F++M + G+ P +VTF+G+L ACS+ GLV E    ++LM   YGI P +EH + +VD LG
Sbjct: 538 FQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLG 597

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG  +EA   +LS  F     +  +LL AC V  +++ G   A+  + LEP  SS+Y  
Sbjct: 598 RAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTA 657

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           LSNI+A+   W +V+  R  MK   V+K+P 
Sbjct: 658 LSNIYASKELWSEVSRIRDLMKDMGVEKEPG 688



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 165/629 (26%), Positives = 283/629 (44%), Gaps = 92/629 (14%)

Query: 21  SSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARIL 80
           S  T +  R L   +LS   FLQ        ++  + + +     ++   L  S H  IL
Sbjct: 11  SKITDNARRGLVDQALSC--FLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLIL 68

Query: 81  NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENV 140
                   F+++ L++MYS+   +  AR LFD MP+RD +SWNS++A Y+  G  N E  
Sbjct: 69  KKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL-NEEAC 127

Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
                +  S        S  TLA +LK C   G     + VHGYA+KIG   D FVSG+ 
Sbjct: 128 GLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGST 187

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           V +Y K G +  A   FD ++ +D+V W  M+  YA+N + EE   LF  +   G  P+D
Sbjct: 188 VYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPND 247

Query: 261 ESVQCVLG---VISD--LGKRHEEQVQAYAIKLLLY------------------------ 291
            +  CVL     +SD  +G+    +V      + ++                        
Sbjct: 248 TTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGE 307

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
            +  N+V +N  ++GY  +G    A+  +  +    ++ DS TF+   ++ + +  +  G
Sbjct: 308 MSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEG 367

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------CVCGL------- 386
            Q+H  ++K G  S V VGNS++N YSK G                  C  G+       
Sbjct: 368 AQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQN 427

Query: 387 ------------------RTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVAD 425
                             +TD+F+ +SV++A SS   + +G HL    H H +K+     
Sbjct: 428 GEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHL----HAHVMKSGLDCT 483

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            +V +A+ID+Y + G + +A+ +F      ++ +WN+MI GY  +    +AL LF  M +
Sbjct: 484 IYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTS 543

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKC 540
           SG     +T    + AC    ++++G+      +H Y +    E   C    ++D+  + 
Sbjct: 544 SGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTC----MVDLLGRA 599

Query: 541 GAMVDAQS-IFNDIPAPDDVAWTTMISGC 568
           G + +A++ + +   + +   W +++S C
Sbjct: 600 GYLEEAEAFLLSSSFSKEPGIWGSLLSAC 628


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 203/627 (32%), Positives = 325/627 (51%), Gaps = 49/627 (7%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A +L    +  N   W   ++G  + G      E F  M    +  D   +   L    G
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM----------------------GC 382
            D++ LG  +H   +  GF S   V  +L+NMY+K+                        
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243

Query: 383 VCG-----LRTDQFTLASVLRASSSLPEG---------------LHLSKQIHVHAIKNDT 422
           + G     L  D F L   +      P+                ++ +K++  +A++   
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFEN---KDGFDLATWNAMIFGYILSNNSHKALEL 479
            +++ V TALID+  + GS+ EA  +F +      F+ A WNAMI GY+ S  + KALEL
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFN-APWNAMISGYLRSGFNEKALEL 362

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSSGILDMYV 538
           F+ M  +   LD  T  +   A   L  L  GK++HA A+KSG E++ + +S+ + + Y 
Sbjct: 363 FAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYA 422

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG++ D + +FN +   D ++WT++++      E D A+ I+  MR  G+ P++FTF+ 
Sbjct: 423 KCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSS 482

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ + + L  LE G+Q+H  + K+    D  +  +LVDMYAKCG + DA  +F ++   +
Sbjct: 483 VLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNAD 542

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
           TV W A++ G AQHG  ++ L+LF  M   GVEP++VTF+ VL ACS+ GLV E  + F 
Sbjct: 543 TVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFK 602

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
           LM++ YG+ PE+EHY+ +VD L R G   +A E I  MP E +  + + LLGACRV G+ 
Sbjct: 603 LMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNV 662

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAK 838
           E G+  A+K+++ +  +S+ YVLLSN +  +  + D  S R  MK + VKK+P    +  
Sbjct: 663 ELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPG-CSWIS 721

Query: 839 VEGLIKRIKEGGYV-PDTDFVLLDVEE 864
           V G + +   G    P+ D +   +EE
Sbjct: 722 VNGTLHKFYAGDQQHPEKDKIYAKLEE 748



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/600 (24%), Positives = 265/600 (44%), Gaps = 89/600 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           +LR  +    L   K+ H  +L S  S      L N++   YS+C  +  A RLFD+M  
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+  SW  ++A  A +G        +GF  F  ++    F  +   + +L++C+    + 
Sbjct: 134 RNTFSWTVLIAGLAENGL-----FLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               VH   +  G     FVS AL+N+Y+K  +I ++  +F+ M E +VV W  M+  + 
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDES---VQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
            N    + F LF+ +   G+ PD ++   V   +G++ D+ K  E  V  YA++L + +N
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE--VSGYALELGVDSN 306

Query: 294 ------------------------NSNVVL------WNKKLSGYLQVGDNHGAIECFVNM 323
                                   NS+ +       WN  +SGYL+ G N  A+E F  M
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF-YSAVIVGNSLINMYSKMGC 382
            ++++  D  T+     A+A    L+LG+++H   +KSG   + V + N++ N Y+K G 
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426

Query: 383 V---------------------------C----------------GLRTDQFTLASVLRA 399
           +                           C                G+  +QFT +SVL +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            ++L   L   +Q+H    K     D  + +AL+D+Y + G + +A+ +F      D  +
Sbjct: 487 CANLCL-LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVS 545

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W A+I G+        AL+LF  M   G   + +T    + AC    ++++G Q      
Sbjct: 546 WTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMK 605

Query: 520 KS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           K+ G   ++   + I+D+  + G + DA    + +P  P+++ W T++  C  +G  +L 
Sbjct: 606 KTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELG 665



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 3/244 (1%)

Query: 508 LKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           LKQ K +H + +KS F     L + + +   Y KC  +  A  +F+ +   +  +WT +I
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G  +NG        + +M+  G+ PD+F ++ +++    L ++E G  +HA ++    +
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           S  FV  +L++MYAK   IED+Y +F  M   N V WNAM+ G   +    +   LF  M
Sbjct: 204 SHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM 263

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              GV PD+ TFIGV  A      V++A E      E  G++      + L+D   + G 
Sbjct: 264 MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALE-LGVDSNTLVGTALIDMNSKCGS 322

Query: 746 TKEA 749
            +EA
Sbjct: 323 LQEA 326



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 11/283 (3%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           VA ++   + ID  CR         LF+     +  +W  +I G   +       E F  
Sbjct: 111 VAHAYSKCSDIDAACR---------LFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCE 161

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M + G   D+   +  ++ C  L  ++ G  +HA  +  GF     VS+ +L+MY K   
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + D+  +FN +   + V+W  MI+G   N     A  ++ +M   GV PD  TF  + KA
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ--MDMRNTV 660
              L  + + +++    ++L   S+  VG +L+DM +KCG++++A  +F    +  R   
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            WNAM+ G  + G  E+ L+LF  M  + +  D  T+  V +A
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA 384


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 284/553 (51%), Gaps = 46/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H     N    +  V+  L+ +Y   G++ +A+ LF+        +W+ ++ GY   
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            N      +F  +  SG  LD+ +    ++AC  L  LK G+ +H   +K G +    V 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++DMY +C  + DA  IF  +   D   WT MI    ++G    +L  + +MR  G+V
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+     +V A + L A+ + + IHA +     S D  +G +++DMYAKCG++E A  +
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M +RN + W+AM+     HG GE+ L+LF  M   G+ P+ +TF+ +L ACS+ GL+
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLI 369

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E    F  M ++YG+ P+V+HY+ +VD LGRAGR  EA E+I  MP E    +  ALLG
Sbjct: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLG 429

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR+    +  + VA  L+ L+      YVLLSNI+A A +W+D+   R  M +  ++K 
Sbjct: 430 ACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKI 489

Query: 831 P-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                       ++ I+  ++ L ++++  GY PDT+ VL DV+EE K
Sbjct: 490 PGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVK 549

Query: 868 ERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANR 904
           +  LY HSEKLA A+GL+  P    I   K                           A R
Sbjct: 550 QGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKR 609

Query: 905 FHHLRDGMCPCAD 917
           FHH ++G+C C D
Sbjct: 610 FHHFKEGVCSCRD 622



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 145/284 (51%), Gaps = 3/284 (1%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   D ++   V+RA   L + L   + IH   +K       FV   L+D+Y R   + +
Sbjct: 146 GAPLDDYSAPVVIRACRDLKD-LKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVED 204

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      DLATW  MI     S    ++L  F  M   G   D++ + T V AC  
Sbjct: 205 AHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAK 264

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  + + K +HAY   +G+ LD+ + + ++DMY KCG++  A+ IF+ +   + + W+ M
Sbjct: 265 LGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAM 324

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI-KLD 623
           I+    +G+ + AL ++  M  SG++P+  TF  L+ A S    +E+G++  +++  +  
Sbjct: 325 IAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYG 384

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAML 666
            + D      +VD+  + G +++A  + + M + ++ VLW A+L
Sbjct: 385 VTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 1/242 (0%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L Q +Q+HA    +G   +L V++ +L MYV+ GA+ DAQ +F+ +      +W+ ++ G
Sbjct: 66  LFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGG 125

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G       ++ ++  SG   D+++  ++++A   L  L+ GR IH   +K      
Sbjct: 126 YAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYG 185

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FV  +LVDMYA+C  +EDA+ +F +M  R+   W  M+  LA+ G   E+L  F+ M+ 
Sbjct: 186 HFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRN 245

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G+ PD V  + V+ AC+  G +++A +  H      G   +V   + ++D   + G  +
Sbjct: 246 QGIVPDKVALVTVVYACAKLGAMNKA-KAIHAYINGTGYSLDVILGTAMIDMYAKCGSVE 304

Query: 748 EA 749
            A
Sbjct: 305 SA 306



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 5/222 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           ++R      DL  G+  H   L        F+   L+ MY+RC  +  A ++F KM  RD
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRD 216

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L +W  ++ A A SG        E    F  +R       ++ L  ++  C   G +  +
Sbjct: 217 LATWTVMIGALAESGVP-----VESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKA 271

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H Y    G   D  +  A++++Y+K G +  A+++FD MQ R+V+ W  M+ AY  +
Sbjct: 272 KAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYH 331

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           G GE+   LF  + RSG+ P+  +   +L   S  G   E Q
Sbjct: 332 GQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQ 373



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 136/319 (42%), Gaps = 34/319 (10%)

Query: 64  ISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           +S  +L   +  HA+I  +    +  + N L+ MY   G+L  A+ LFD M  R   SW+
Sbjct: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWS 120

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
            I+  YA  G     N    F +FR L  S       +   +++ C     +     +H 
Sbjct: 121 VIVGGYAKVG-----NFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHC 175

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
             LK GL +  FV   LV++Y++   + +A  +F  M +RD+  W VM+ A AE+G   E
Sbjct: 176 ITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVE 235

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV-------QAYAIKLLLYN---- 292
               F  +   G+ PD  ++  V+   + LG  ++ +          Y++ ++L      
Sbjct: 236 SLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMID 295

Query: 293 ------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                                NV+ W+  ++ Y   G    A+E F  M+RS +  + +T
Sbjct: 296 MYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRIT 355

Query: 335 FLVALAAVAGTDNLNLGQQ 353
           F+  L A +    +  GQ+
Sbjct: 356 FVSLLYACSHAGLIEEGQR 374


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/556 (33%), Positives = 297/556 (53%), Gaps = 49/556 (8%)

Query: 411 KQIHVHAIKNDTVADS--FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           KQIH  +I++     +  F    +  +   +  M+ A  +F      ++ TWN MI G+ 
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 469 LSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            S N   A+ELFS MH +   L D  T     KA   L+ +  G+ +H+  +++GF+   
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V + ++ MY   G++  A  +F  +   D VAW ++I+G   NG  + AL++Y +M   
Sbjct: 172 FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           GV PD FT   L+ A   L AL  G ++H  ++K+    +     +L+D+Y+KCGN  DA
Sbjct: 232 GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDA 291

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F +M+ R+ V W +++VGLA +G G E LKLF +++  G++P  +TF+GVL ACS+ 
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           G++ E +  F  M+E+YGI P +EH+  +VD L RAG+  +A + I +MP   +A + R 
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LLGAC + G  E G+    ++  LE   S  +VLLSN++A+  +W DV + R  M  K V
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK P                       ++  +A +  + + +K  GYVP T  VL D+EE
Sbjct: 472 KKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEE 531

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN 903
           EEKE AL +H+EK+A A+ L++TPP + I                     +  +E +  +
Sbjct: 532 EEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRD 591

Query: 904 --RFHHLRDGMCPCAD 917
             RFHH +DG C C D
Sbjct: 592 RSRFHHFKDGSCSCKD 607



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 154/306 (50%), Gaps = 5/306 (1%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           + ++S+M     +  D  T   + +A + L + + L + IH   ++N   +  FV  +L+
Sbjct: 120 VELFSQMHAASSILPDTHTFPFLFKAVAKLMD-VSLGEGIHSVVVRNGFDSLRFVQNSLV 178

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y   GS+  A  +FE     D   WN++I G+ L+   ++AL L+  M + G   D  
Sbjct: 179 HMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGF 238

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T+ + + AC  L  L  G+++H Y +K G   +   S+ +LD+Y KCG   DAQ +F+++
Sbjct: 239 TMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
                V+WT++I G   NG  + AL ++ ++   G+ P E TF  ++ A S    L++G 
Sbjct: 299 EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGF 358

Query: 614 QIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLA 670
             +   +K +    P +     +VD+  + G + DAY   + M +  N V+W  +L    
Sbjct: 359 N-YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417

Query: 671 QHGNGE 676
            HG+ E
Sbjct: 418 IHGHLE 423



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 8/244 (3%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFL 90
           PS ++ L  F Q    SS    +  F  L  A++   D+ LG+  H+ ++ +     RF+
Sbjct: 116 PSPAVEL--FSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFV 173

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            N+L+ MYS  GSL  A ++F+ M  RD ++WNS++  +A +G  N     E   L+R +
Sbjct: 174 QNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPN-----EALTLYREM 228

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                     T+  LL  C+  G +   E VH Y +K+GLV ++  S AL+++YSK G  
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           R+A+ +FD M+ER VV W  ++   A NG G E   LF +L R GL P + +   VL   
Sbjct: 289 RDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348

Query: 271 SDLG 274
           S  G
Sbjct: 349 SHCG 352



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 55/345 (15%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAA 341
           ++A ++       N+  WN  + G+ +  +   A+E F  M   S++  D+ TF     A
Sbjct: 86  SFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------------- 384
           VA   +++LG+ IH   +++GF S   V NSL++MYS +G +                  
Sbjct: 146 VAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAW 205

Query: 385 --------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                     G+  D FT+ S+L A   L   L L +++H++ +
Sbjct: 206 NSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL-GALALGERVHMYMV 264

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           K   V +   S AL+D+Y + G+  +A+ +F+  +   + +W ++I G  ++   ++AL+
Sbjct: 265 KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALK 324

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGI 533
           LF  +   G +  EIT    + AC    ML +G     +    Y +    E   C    +
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGC----M 380

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLA 577
           +D+  + G + DA     ++P P + V W T++  C  +G  +L 
Sbjct: 381 VDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELG 425



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 34/249 (13%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWD--EFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           L++LC SS      + +H ++++ G+     +F    +  + S    +  A  +F+ +Q 
Sbjct: 40  LVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQA 97

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVIS-----DLGKR 276
            ++  W  M+R +AE+        LF  +H  S + PD  +   +   ++      LG+ 
Sbjct: 98  PNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEG 157

Query: 277 HEEQVQAYAIKLLLYNNNSNV------------------------VLWNKKLSGYLQVGD 312
               V       L +  NS V                        V WN  ++G+   G 
Sbjct: 158 IHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGM 217

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
            + A+  +  M    V+ D  T +  L+A      L LG+++H   +K G        N+
Sbjct: 218 PNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNA 277

Query: 373 LINMYSKMG 381
           L+++YSK G
Sbjct: 278 LLDLYSKCG 286


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/579 (32%), Positives = 308/579 (53%), Gaps = 51/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G  TD+FT   ++ A + L + L  ++++     + + ++ +     L   Y +NG +  
Sbjct: 71  GAATDRFTANHLMLAYADLGD-LTAARELFERIPRRNVMSWNI----LFGGYIKNGDLGG 125

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ATWNAM+ G        ++L  F  M   G   DE  + +  + C  
Sbjct: 126 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAG 185

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + + +++   +P+   V+  T+
Sbjct: 186 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 245

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G   NG+ + AL  +  MR  GV  D  TF   + + S L AL QG+QIH  ++K   
Sbjct: 246 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 305

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
                V   LV MY++CG + D+  +F      +T L +AM+     HG+G++ ++LF+ 
Sbjct: 306 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 365

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G EP  VTF+ +L ACS++GL  E  + F LM + YG++P V+HY+ +VD LGR+G
Sbjct: 366 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 425

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA  LILSMP      + + LL AC+ Q + +  + +A++++ L+P DS++YVLLSN
Sbjct: 426 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSN 485

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I A + +W DV+  R  M+  NV+K+P                          I   +E 
Sbjct: 486 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 545

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI----- 893
           ++ +I++ GY PD   VL D+E+EEKE +L +HSEKLA A+  +S P   P  V+     
Sbjct: 546 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRV 605

Query: 894 -------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                        ++ +E +    +RFHH +DG C C D
Sbjct: 606 CDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRD 644



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 32/268 (11%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGIL----DM--------------------------- 536
           L+  +Q+HA+A  SG   D   ++ ++    D+                           
Sbjct: 57  LRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG 116

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y+K G +  A+ +F+++P  +   W  M++G  + G ++ +L  +  MR  G+ PDEF  
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 176

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             + +  + L  +  GRQ+HA +++     D  VG SL  MY +CG +++   + + +  
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
            + V  N ++ G  Q+G+ E  L+ F  M++ GV  D VTF+  +S+CS    +++  + 
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQG-QQ 295

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAG 744
            H    K G++  V   + LV    R G
Sbjct: 296 IHGQVMKAGVDKVVPVMTCLVHMYSRCG 323



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 143/361 (39%), Gaps = 77/361 (21%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV---------------QYDSVTFLV--- 337
           NV+ WN    GY++ GD  GA + F  M   NV                 +S+ F +   
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 165

Query: 338 ---------ALAAV----AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
                     L +V    AG  ++  G+Q+H   ++SG    + VG+SL +MY + GC+ 
Sbjct: 166 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 225

Query: 384 -------------------------------------CGLRT-----DQFTLASVLRASS 401
                                                C +R+     D  T  S + + S
Sbjct: 226 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   +QIH   +K        V T L+ +Y R G + ++E +F    G D    +
Sbjct: 286 DLA-ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI  Y    +  KA+ELF  M   G    ++T    + AC    + ++G        K+
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404

Query: 522 -GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G +  +   + ++D+  + G + +A+++   +P  PD V W T++S C      D+A  
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 464

Query: 580 I 580
           I
Sbjct: 465 I 465



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 68/373 (18%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA    S    DRF  N+LM  Y+  G L  AR LF+++P R+++SWN +   Y  +
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 133 GE-GNAENV-------------------------TEGFRLFRSLRESITFTSRLTLAPLL 166
           G+ G A  +                          E    F  +R          L  + 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           + C     V     VH Y ++ GL  D  V  +L ++Y + G ++E + +   +    +V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQV 281
               ++    +NG  E     F  +   G+  D  +    +   SDL     G++   QV
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300

Query: 282 QAYAI------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
               +                        ++      S+  L +  +S Y   G    AI
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           E F  M+    +   VTFL  L A +       G D   L  + +G       Y+ V   
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCV--- 417

Query: 371 NSLINMYSKMGCV 383
              +++  + GC+
Sbjct: 418 ---VDLLGRSGCL 427



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L     +   +P  
Sbjct: 178 SVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 237

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
            ++S N+I+A    +G  ++E   E F + RS+    + +TF S ++       C     
Sbjct: 238 SIVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISS------CSDLAA 289

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +HG  +K G+     V   LV++YS+ G + +++ +F G    D  L   M+ A
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +   G  P D +   +L   S  G + EE +  + +    Y   
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLK-EEGMDCFELMTKTYGMQ 408

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G ++    +I S  +  D V +   L+A     N ++ ++
Sbjct: 409 PSV----KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 464

Query: 354 I 354
           I
Sbjct: 465 I 465



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 111/296 (37%), Gaps = 40/296 (13%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ L +A   L  L   RQ+HA       ++D F    L+  YA  G++  A  LF+++ 
Sbjct: 47  FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103

Query: 656 MRNTV-------------------------------LWNAMLVGLAQHGNGEETLKLFED 684
            RN +                                WNAM+ GL   G  EE+L  F D
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G+ PD      V   C+    V    +  H    + G++ ++   S L     R G
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ-VHAYVVRSGLDRDMCVGSSLAHMYMRCG 222

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
             +E GE +L M    S      ++      GD+E      E    +     +A V ++ 
Sbjct: 223 CLQE-GEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA---LEYFCMMRSVGVAADV-VTF 277

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
           + A ++  D    A+G+     V K   D +   +  L+      G + D++ V  
Sbjct: 278 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFF 333


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/580 (33%), Positives = 314/580 (54%), Gaps = 48/580 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   +QFT +S+L AS++    LH  +Q+H    K+   A+ FV TAL+D+Y +   M  
Sbjct: 5   GPYPNQFTFSSILSASAATMMVLH-GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 63

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACG 503
           A  +F+     +L +WN+MI G+  +N   +A+ +F  +      + +E+++++ + AC 
Sbjct: 64  AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            +  L  G+Q+H   +K G      V + ++DMY KC    +   +F  +   D V W  
Sbjct: 124 NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 183

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           ++ G V N + + A + +  MR  G++PDE +F+ ++ +S+ L AL QG  IH  +IKL 
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 243

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              +  +  SL+ MYAKCG++ DAY +F+ ++  N + W AM+     HG   + ++LFE
Sbjct: 244 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFE 303

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M + G+EP  VTF+ VLSACS+TG V E   +F+ M++ + + P  EHY+ +VD LGRA
Sbjct: 304 HMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRA 363

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G   EA   I SMP + + S+  ALLGACR  G+ + G+  AE+L  +EP++   YVLL+
Sbjct: 364 GWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLA 423

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVE 840
           N+   + + ++    R  M    V+K+P                       +D I+  +E
Sbjct: 424 NMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLE 483

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
            L K +K+ GYV +T+FV   +EE E+E+ L+YHSEKLA A+GL++ P  S I       
Sbjct: 484 KLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLR 543

Query: 894 --------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                         + ++E +    NRFH   DG C C D
Sbjct: 544 TCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGD 583



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 1/222 (0%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M  SG   ++ T ++ + A    +M+  G+Q+H+   K GF+ ++ V + ++DMY KC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPDEFTFAILVK 601
           M  A  +F+ +P  + V+W +MI G   N   D A+ ++   +R   V+P+E + + ++ 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           A + +  L  GRQ+H  ++K       +V  SL+DMY KC   ++   LF+ +  R+ V 
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           WN +++G  Q+   EE    F  M+  G+ PD  +F  VL +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 222



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 35/324 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL  + +T  +L G+  H+ I       + F+   L+ MY++C  +  A R+FD+MP+R
Sbjct: 15  SILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPER 74

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSGYVW 176
           +L+SWNS++  + H+   N  +   G  +F+  LRE     + ++++ +L  C + G + 
Sbjct: 75  NLVSWNSMIVGFFHN---NLYDRAVG--VFKDVLREKTVIPNEVSVSSVLSACANMGGLN 129

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
               VHG  +K GLV   +V  +L+++Y K     E   LF  + +RDVV W V++  + 
Sbjct: 130 FGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV 189

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN-- 293
           +N   EE  + F  + R G+ PD+ S   VL   + L   H+   +    IKL    N  
Sbjct: 190 QNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMC 249

Query: 294 --------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                     + NV+ W   +S Y   G  +  IE F +M+   
Sbjct: 250 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 309

Query: 328 VQYDSVTFLVALAAVAGTDNLNLG 351
           ++   VTF+  L+A + T  +  G
Sbjct: 310 IEPSHVTFVCVLSACSHTGRVEEG 333



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/461 (22%), Positives = 175/461 (37%), Gaps = 103/461 (22%)

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +R S  + ++ T + +L    ++  V   + +H    K G   + FV  ALV++Y+K   
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLG 268
           +  A  +FD M ER++V W  M+  +  N   +    +F D+ R   + P++ SV  VL 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 269 VISDLGK-RHEEQVQAYAIKL----LLYNNNS------------------------NVVL 299
             +++G      QV    +K     L Y  NS                        +VV 
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  + G++Q      A   F  M R  +  D  +F   L + A    L+ G  IH   +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
           K G+   + +  SLI MY+K G                                      
Sbjct: 241 KLGYVKNMCILGSLITMYAKCG-------------------------------------- 262

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                      +L+D Y           +FE  +  ++ +W AMI  Y L   +++ +EL
Sbjct: 263 -----------SLVDAY----------QVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 301

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQG-------KQMHAYAMKSGFELDLCVSSG 532
           F HM + G     +T    + AC     +++G       K++H   M  G E   C    
Sbjct: 302 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH--DMNPGPEHYAC---- 355

Query: 533 ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
           ++D+  + G + +A+     +P  P    W  ++  C   G
Sbjct: 356 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYG 396



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 2/146 (1%)

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           MR SG  P++FTF+ ++ AS+    +  G+Q+H+ + K    ++ FVG +LVDMYAKC +
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED-MKAHGVEPDSVTFIGVLS 702
           +  A  +F QM  RN V WN+M+VG   +   +  + +F+D ++   V P+ V+   VLS
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEP 728
           AC+  G ++   +  H +  K+G+ P
Sbjct: 121 ACANMGGLNFGRQ-VHGVVVKFGLVP 145


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/579 (32%), Positives = 308/579 (53%), Gaps = 51/579 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G  TD+FT   ++ A + L + L  ++++     + + ++ +     L   Y +NG +  
Sbjct: 133 GAATDRFTANHLMLAYADLGD-LTAARELFERIPRRNVMSWNI----LFGGYIKNGDLGG 187

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ATWNAM+ G        ++L  F  M   G   DE  + +  + C  
Sbjct: 188 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAG 247

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + + +++   +P+   V+  T+
Sbjct: 248 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 307

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G   NG+ + AL  +  MR  GV  D  TF   + + S L AL QG+QIH  ++K   
Sbjct: 308 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 367

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
                V   LV MY++CG + D+  +F      +T L +AM+     HG+G++ ++LF+ 
Sbjct: 368 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 427

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G EP  VTF+ +L ACS++GL  E  + F LM + YG++P V+HY+ +VD LGR+G
Sbjct: 428 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 487

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA  LILSMP      + + LL AC+ Q + +  + +A++++ L+P DS++YVLLSN
Sbjct: 488 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSN 547

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I A + +W DV+  R  M+  NV+K+P                          I   +E 
Sbjct: 548 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 607

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVI----- 893
           ++ +I++ GY PD   VL D+E+EEKE +L +HSEKLA A+  +S P   P  V+     
Sbjct: 608 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRV 667

Query: 894 -------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                        ++ +E +    +RFHH +DG C C D
Sbjct: 668 CDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRD 706



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 35/276 (12%)

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL----DM------------------- 536
           +AC  L  L+Q   +HA+A  SG   D   ++ ++    D+                   
Sbjct: 114 RACRALRPLRQ---LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVM 170

Query: 537 --------YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                   Y+K G +  A+ +F+++P  +   W  M++G  + G ++ +L  +  MR  G
Sbjct: 171 SWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREG 230

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + PDEF    + +  + L  +  GRQ+HA +++     D  VG SL  MY +CG +++  
Sbjct: 231 MHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGE 290

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            + + +   + V  N ++ G  Q+G+ E  L+ F  M++ GV  D VTF+  +S+CS   
Sbjct: 291 AVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLA 350

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
            +++  +  H    K G++  V   + LV    R G
Sbjct: 351 ALAQG-QQIHGQVMKAGVDKVVPVMTCLVHMYSRCG 385



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 143/361 (39%), Gaps = 77/361 (21%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV---------------QYDSVTFLV--- 337
           NV+ WN    GY++ GD  GA + F  M   NV                 +S+ F +   
Sbjct: 168 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 227

Query: 338 ---------ALAAV----AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
                     L +V    AG  ++  G+Q+H   ++SG    + VG+SL +MY + GC+ 
Sbjct: 228 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 287

Query: 384 -------------------------------------CGLRT-----DQFTLASVLRASS 401
                                                C +R+     D  T  S + + S
Sbjct: 288 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 347

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   +QIH   +K        V T L+ +Y R G + ++E +F    G D    +
Sbjct: 348 DLA-ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 406

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI  Y    +  KA+ELF  M   G    ++T    + AC    + ++G        K+
Sbjct: 407 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 466

Query: 522 -GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G +  +   + ++D+  + G + +A+++   +P  PD V W T++S C      D+A  
Sbjct: 467 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 526

Query: 580 I 580
           I
Sbjct: 527 I 527



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 68/373 (18%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA    S    DRF  N+LM  Y+  G L  AR LF+++P R+++SWN +   Y  +
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 182

Query: 133 GE-GNAENV-------------------------TEGFRLFRSLRESITFTSRLTLAPLL 166
           G+ G A  +                          E    F  +R          L  + 
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           + C     V     VH Y ++ GL  D  V  +L ++Y + G ++E + +   +    +V
Sbjct: 243 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 302

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQV 281
               ++    +NG  E     F  +   G+  D  +    +   SDL     G++   QV
Sbjct: 303 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 362

Query: 282 QAYAI------------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
               +                        ++      S+  L +  +S Y   G    AI
Sbjct: 363 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 422

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           E F  M+    +   VTFL  L A +       G D   L  + +G       Y+ V   
Sbjct: 423 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCV--- 479

Query: 371 NSLINMYSKMGCV 383
              +++  + GC+
Sbjct: 480 ---VDLLGRSGCL 489



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L     +   +P  
Sbjct: 240 SVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 299

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
            ++S N+I+A    +G  ++E   E F + RS+    + +TF S ++       C     
Sbjct: 300 SIVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISS------CSDLAA 351

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +HG  +K G+     V   LV++YS+ G + +++ +F G    D  L   M+ A
Sbjct: 352 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 411

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +   G  P D +   +L   S  G + EE +  + +    Y   
Sbjct: 412 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLK-EEGMDCFELMTKTYGMQ 470

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G ++    +I S  +  D V +   L+A     N ++ ++
Sbjct: 471 PSV----KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 526

Query: 354 I 354
           I
Sbjct: 527 I 527



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 36/192 (18%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ L +A   L  L   RQ+HA       ++D F    L+  YA  G++  A  LF+++ 
Sbjct: 109 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165

Query: 656 MRNTV-------------------------------LWNAMLVGLAQHGNGEETLKLFED 684
            RN +                                WNAM+ GL   G  EE+L  F D
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G+ PD      V   C+    V    +  H    + G++ ++   S L     R G
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ-VHAYVVRSGLDRDMCVGSSLAHMYMRCG 284

Query: 745 RTKEAGELILSM 756
             +E GE +L M
Sbjct: 285 CLQE-GEAVLRM 295


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/593 (31%), Positives = 308/593 (51%), Gaps = 53/593 (8%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           A A+ L       NVV W   +SGY + G    A+  F +M+ S V  +      AL A 
Sbjct: 65  ADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVAC 124

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
           A    L  G+Q+H   +++GF     +G+ LI MYS+ G +                   
Sbjct: 125 ADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYT 184

Query: 384 ------C------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                 C                  GL+ ++ T+ ++L A   +     L +QIH + IK
Sbjct: 185 SLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV-----LGQQIHGYLIK 239

Query: 420 NDTVADSFV--STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
              +    V  STALID Y RNG    A+ +F++    ++ +W +M+  YI      +AL
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           ++F  M + G   +E  ++  + ACG + +   G+Q+H  A+K     D+ VS+ +L MY
Sbjct: 300 QVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMY 356

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            + G + + +++ N I  PD V+WTT IS    NG  + A+++  QM   G  P+ + F+
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFS 416

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ + + + +L+QG Q H   +KL C S+   G +L++MY+KCG +  A + F  M   
Sbjct: 417 SVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 476

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           +   WN+++ G AQHG+  + L++F  M+++G++PD  TF+GVL  C+++G+V E    F
Sbjct: 477 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFF 536

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
            LM ++Y   P   HY+ ++D LGR GR  EA  +I  MPFE  A + + LL +C++  +
Sbjct: 537 RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRN 596

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
            + GK  A++LM L   DS++YVL+SNI+A   +W+D    R  M    VKKD
Sbjct: 597 LDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKD 649



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 243/569 (42%), Gaps = 103/569 (18%)

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
           ++ PD  L    +    + G L  A  LFD+MP +++++W S+++ Y  +G   A     
Sbjct: 43  AESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEA----- 97

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
              +F  + ES    +       L  C   G + A E VH  A++ G   D ++   L+ 
Sbjct: 98  ALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIE 157

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +YS+ G +  AK +FD M   DVV +  ++ A+  NG  E      + + + GL P++ +
Sbjct: 158 MYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHT 217

Query: 263 VQCVLGVISD-LGKRHEEQVQAYAIKLL---------------LYNNN------------ 294
           +  +L      LG    +Q+  Y IK +                Y+ N            
Sbjct: 218 MTTILTACPRVLG----QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDS 273

Query: 295 ---SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               NVV W   +  Y++ G    A++ F +MI   V  +     + L A     ++ LG
Sbjct: 274 LHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLG 330

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
           +Q+H + +K    + + V N+L++MY + G V                            
Sbjct: 331 RQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQN 390

Query: 384 ----------CGLRTDQFT-----LASVLRAS---SSLPEGLHLSKQIHVHAIKNDTVAD 425
                     C + ++ FT      +SVL +    +SL +G+    Q H  A+K    ++
Sbjct: 391 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM----QFHCLALKLGCDSE 446

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
                ALI++Y + G M  A   F+     D+ +WN++I G+    +++KALE+FS M +
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 506

Query: 486 SGERLDEITIATAVKACGCLLMLKQGK-----QMHAYAMKSGFELDLCVSSGILDMYVKC 540
           +G + D+ T    +  C    M+++G+      +  Y+         C    ++DM  + 
Sbjct: 507 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC----MIDMLGRN 562

Query: 541 GAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           G   +A  + ND+P  PD + W T+++ C
Sbjct: 563 GRFDEALRMINDMPFEPDALIWKTLLASC 591



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 173/354 (48%), Gaps = 27/354 (7%)

Query: 414 HVHAIKNDTVADSFVSTALIDVYC-----------------RNGSMAEAEYLFENKDGFD 456
           HV + +   V D   S A  D  C                 ++G +A+A  LF+     +
Sbjct: 19  HVPSRRRRRVCDGLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKN 78

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  W +++ GY  +     AL +F+ M  SG   ++     A+ AC  L  L+ G+Q+H+
Sbjct: 79  VVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHS 138

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+++GF  D  + S +++MY +CG++  A+ +F+ + +PD V +T++IS    NGE +L
Sbjct: 139 LAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFEL 198

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC--SSDPFVGISL 634
           A     QM   G+ P+E T   ++ A  C   L  G+QIH  LIK     S   +   +L
Sbjct: 199 AAEALIQMLKQGLKPNEHTMTTILTA--CPRVL--GQQIHGYLIKKIGLRSQSVYSSTAL 254

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +D Y++ G  + A  +F  +  +N V W +M+    + G  EE L++F DM + GV+P+ 
Sbjct: 255 IDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNE 314

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
                VL AC   GL  +     H    K+ +  ++   + L+   GR G  +E
Sbjct: 315 FALSIVLGACGSIGLGRQ----LHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 364



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 161/348 (46%), Gaps = 51/348 (14%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H+  + +    D ++ + L+ MYSRCGSL  A+ +FD+M   D++ + S+++A
Sbjct: 130 LRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA 189

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESI-----TFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           +  +GE   E   E   L + L++ +     T T+ LT  P +            + +HG
Sbjct: 190 FCRNGE--FELAAEA--LIQMLKQGLKPNEHTMTTILTACPRV----------LGQQIHG 235

Query: 184 YAL-KIGLVWDE-FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           Y + KIGL     + S AL++ YS+ G+ + AK +FD +  ++VV W  M++ Y  +G  
Sbjct: 236 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 295

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK-------------L 288
           EE   +F D+   G+ P++ ++  VLG    +G     Q+   AIK             L
Sbjct: 296 EEALQVFGDMISEGVDPNEFALSIVLGACGSIGL--GRQLHCSAIKHDLITDIRVSNALL 353

Query: 289 LLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y                 N ++V W   +S   Q G    AI     M       +  
Sbjct: 354 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGY 413

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            F   L++ A   +L+ G Q H   LK G  S +  GN+LINMYSK G
Sbjct: 414 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 461



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H   +    I D  ++N L++MY R G +     + +K+ + DL+SW + ++A  
Sbjct: 329 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 388

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G G      +   L   +       +    + +L  C     +      H  ALK+G 
Sbjct: 389 QNGFGE-----KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +     AL+N+YSK G++  A+  FD M   DV  W  ++  +A++G   +   +F  
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           +  +G+ PDD +    LGV+  +G  H   V+
Sbjct: 504 MRSNGIKPDDST---FLGVL--MGCNHSGMVE 530



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 22/241 (9%)

Query: 1   MYTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS-I 59
           +  +L+A L        V +++     ++N   F    +  L + H    + +   FS +
Sbjct: 361 LVEELEAMLNKIENPDLVSWTTAISANFQN--GFGEKAIALLCQMHSEGFTPNGYAFSSV 418

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L      + L  G   H   L      +    N L+ MYS+CG +  AR  FD M   D+
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
            SWNS++  +A  G+ N     +   +F  +R +       T   +L  C  SG V   E
Sbjct: 479 TSWNSLIHGHAQHGDAN-----KALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 533

Query: 180 TVHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
                 L   L+ D++           ++++  + G+  EA  + + M  E D ++WK +
Sbjct: 534 ------LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587

Query: 232 L 232
           L
Sbjct: 588 L 588


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/598 (32%), Positives = 316/598 (52%), Gaps = 54/598 (9%)

Query: 370 GNSL--INMYSKMGCVCGLRTDQFTLASVLRASSS--LPEGLHLSKQIHVHAIKNDTVAD 425
           GN L    ++ KM     +  +++ +A+ + +  S    EG    KQ H +A+K+     
Sbjct: 102 GNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEG----KQCHGYALKSGLEFH 157

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
            +V  ALI +Y +   +  A  +     G D+  +N ++ G +   +  +A+++   + +
Sbjct: 158 QYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIIS 217

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G   +  T  T  + C  L  +  GKQ+HA  +KS  + D+ + S I+DMY KCG ++ 
Sbjct: 218 EGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLS 277

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
            ++ F+ + + + V+WT++I+    N   + AL+++ +M +  + P+E+T A+L  +++ 
Sbjct: 278 GRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAG 337

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           L+AL  G Q+HA   K     +  VG +L+ MY K G+I  A  +F  M   N + WNA+
Sbjct: 338 LSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAI 397

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + G + HG G+E L +F+DM A G  P+ VTFIGV+ AC++  LV E +  F+ + +++ 
Sbjct: 398 ITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFR 457

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I P +EHY+ +V  L R+GR  EA   + S          R LL AC V    + G+ +A
Sbjct: 458 IVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIA 517

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
           E L+ LEP D   Y+LLSN+ A   +WD V   R  M+ +NVKK+P              
Sbjct: 518 EYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVF 577

Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAY 882
                    A+LI+  V+ L+ +I+  GYVPD D VL D+E+E+K   L YHSEKLA AY
Sbjct: 578 TSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAY 637

Query: 883 GLISTP---PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           GL+ TP   P +VI                  ++N+  +   ANRFHH ++G C C D
Sbjct: 638 GLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGD 695



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 132/569 (23%), Positives = 229/569 (40%), Gaps = 111/569 (19%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARI-LNSSQIPDRFLT--NNLMT 96
           PFL +S+F +S        +L+ A    +L  G++ HA + + +    D  +   N+L+ 
Sbjct: 7   PFLSRSNFLASPHQDP-IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLIN 65

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESI 154
           +Y +C  +  AR+LFD MP R+++SW++++A Y  +G     N  E F LF+ +  +++I
Sbjct: 66  LYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNG-----NPLEVFELFKKMVVKDNI 120

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
            F +   +A  +  C S  YV   +  HGYALK GL + ++V  AL+ +YSK   +  A 
Sbjct: 121 -FPNEYVIATAISSCDSQMYVEGKQC-HGYALKSGLEFHQYVKNALIQLYSKCSDVGAAI 178

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-- 272
            +   +   D+  + +++    ++    E   +   +   G+  ++ +   +  + +   
Sbjct: 179 QILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLK 238

Query: 273 ---LGKRHEEQVQAYAIKLLLYNNNS------------------------NVVLWNKKLS 305
              LGK+   Q+    I   +Y  +S                        NVV W   ++
Sbjct: 239 DITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIA 298

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            Y Q      A+  F  M    +  +  T  V   + AG   L LG Q+H    KSG   
Sbjct: 299 AYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKG 358

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
            V+VGN+LI MY K G              +L A S                  N T  +
Sbjct: 359 NVMVGNALIIMYFKSG-------------DILAAQS---------------VFSNMTCCN 390

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
                A+I  +  +G   EA                               L +F  M  
Sbjct: 391 IITWNAIITGHSHHGLGKEA-------------------------------LSMFQDMMA 419

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-----GFELDLCVSSGILDMYVKC 540
           +GER + +T    + AC  L ++ +G     + MK      G E   C    I+ +  + 
Sbjct: 420 TGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTC----IVGLLSRS 475

Query: 541 GAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
           G + +A++         D V+W T+++ C
Sbjct: 476 GRLDEAENFMRSHQINWDVVSWRTLLNAC 504


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 217/651 (33%), Positives = 333/651 (51%), Gaps = 54/651 (8%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECF-VNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
            N +V  WN  +SGY + G++   I CF + M+ S +  D  TF   L A     +   G
Sbjct: 46  QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 102

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQF---------TLASVLRAS 400
            +IH   LK GF   V V  SLI++YS+   V   R   D+           + S    S
Sbjct: 103 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 162

Query: 401 SSLPEGLHLSKQIH-------VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
            +  E L LS  +        V  +   T A  F     I  Y     + E+E L + + 
Sbjct: 163 GNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELLRDCQK 221

Query: 454 GFD------LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
            FD      L +WN++I  Y L+    +A+ LF  M  S  + D +T+ +       L  
Sbjct: 222 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 281

Query: 508 LKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           ++  + +  + ++ G+ L D+ + + ++ MY K G +  A+++FN +P  D ++W T+IS
Sbjct: 282 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 341

Query: 567 GCVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           G   NG    A+ +Y+ M   G +  ++ T+  ++ A S   AL QG ++H  L+K    
Sbjct: 342 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 401

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D FV  SL DMY KCG +EDA  LF Q+   N+V WN ++     HG+GE+ + LF++M
Sbjct: 402 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 461

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              GV+PD +TF+ +LSACS++GLV E    F +M+  YGI P ++HY  +VD  GRAG+
Sbjct: 462 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 521

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
            + A + I SM  +  AS+  ALL ACRV G+ + GK  +E L  +EP     +VLLSN+
Sbjct: 522 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 581

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +A+A +W+ V   R     K ++K P                        + ++ ++  L
Sbjct: 582 YASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 641

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
             ++K  GYVPD  FVL DVE++EKE  L  HSE+LA A+ LI+TP  + I
Sbjct: 642 QAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 692



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 219/528 (41%), Gaps = 73/528 (13%)

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           FD + +RD+ +WN +++ Y  +G  N+  V   F LF  L   +T   R T   +LK C 
Sbjct: 42  FDHIQNRDVYAWNLMISGYGRAG--NSSEVIRCFSLFM-LSSGLTPDYR-TFPSVLKACR 97

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
           +   V     +H  ALK G +WD +V+ +L+++YS++  +  A+ LFD M  RD+  W  
Sbjct: 98  T---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNA 154

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLL 289
           M+  Y ++G  +E   L   L       D  +V  +L   ++ G  +    + +Y+IK  
Sbjct: 155 MISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 210

Query: 290 LYNN-------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
           L +                +++ WN  +  Y        AI  F  M  S +Q D +T +
Sbjct: 211 LESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 270

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMGCVCGLR-------- 387
              + ++   ++   + + G TL+ G F   + +GN+++ MY+K+G V   R        
Sbjct: 271 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 330

Query: 388 ------------------------------------TDQFTLASVLRASSSLPEGLHLSK 411
                                                +Q T  SVL A S     L    
Sbjct: 331 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ-AGALRQGM 389

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H   +KN    D FV T+L D+Y + G + +A  LF      +   WN +I  +    
Sbjct: 390 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 449

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVS 530
           +  KA+ LF  M   G + D IT  T + AC    ++ +G+          G    L   
Sbjct: 450 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 509

Query: 531 SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             ++DMY + G +  A      +   PD   W  ++S C  +G  DL 
Sbjct: 510 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 557



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 184/425 (43%), Gaps = 78/425 (18%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H   L    + D ++  +L+ +YSR  ++  AR LFD+MP RD+ SWN++++ Y  
Sbjct: 102 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 161

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           SG     N  E   L   LR        +T+  LL  C  +G      T+H Y++K GL 
Sbjct: 162 SG-----NAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL- 211

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
                         +   +R+ + +FD M  RD++ W  +++AY  N        LF ++
Sbjct: 212 --------------ESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 257

Query: 252 HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK--------------LLLYNN--- 293
             S + PD  ++  +  ++S LG  R    VQ + ++              +++Y     
Sbjct: 258 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 317

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALA 340
                       N++V+ WN  +SGY Q G    AIE +  M     +  +  T++  L 
Sbjct: 318 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 377

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A +    L  G ++HG  LK+G Y  V V  SL +MY K    CG   D  +L   +   
Sbjct: 378 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK----CGRLEDALSLFYQIPRV 433

Query: 401 SSLP-------EGLH--------LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +S+P        G H        L K++    +K D +  +FV+  L+     +G + E 
Sbjct: 434 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI--TFVT--LLSACSHSGLVDEG 489

Query: 446 EYLFE 450
           ++ FE
Sbjct: 490 QWCFE 494



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 23/263 (8%)

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFS-HMHTSGERLDEITIATAVKACGCL 505
           + F++    D+  WN MI GY  + NS + +  FS  M +SG   D  T  + +KAC  +
Sbjct: 40  HTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV 99

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +    G ++H  A+K GF  D+ V++ ++ +Y +  A+ +A+ +F+++P  D  +W  MI
Sbjct: 100 I---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 156

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           SG   +G    AL++ + +R      D  T   L+ A +      +G  IH+  IK    
Sbjct: 157 SGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 212

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           S+                + D   +F +M +R+ + WN+++     +      + LF++M
Sbjct: 213 SEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 257

Query: 686 KAHGVEPDSVTFIGVLSACSYTG 708
           +   ++PD +T I + S  S  G
Sbjct: 258 RLSRIQPDCLTLISLASILSQLG 280



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 24/276 (8%)

Query: 85  IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
           + D  + N ++ MY++ G +  AR +F+ +P+ D+ISWN+I++ YA +G       +E  
Sbjct: 299 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNG-----FASEAI 353

Query: 145 RLFRSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
            ++  + E     + + T   +L  C  +G +     +HG  LK GL  D FV  +L ++
Sbjct: 354 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 413

Query: 204 YSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV 263
           Y K G++ +A  LF  +   + V W  ++  +  +G GE+   LF ++   G+ PD  + 
Sbjct: 414 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 473

Query: 264 QCVLGVIS-----DLGKRHEEQVQA-YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
             +L   S     D G+   E +Q  Y I   L +    V ++ +            G +
Sbjct: 474 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA-----------GQL 522

Query: 318 ECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQ 352
           E  +  I+S ++Q D+  +   L+A     N++LG+
Sbjct: 523 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 558



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 13/195 (6%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +++   W S+L        L  G   H R+L +    D F+  +L  MY +CG L  A  
Sbjct: 366 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 425

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           LF ++P  + + WN+++A +   G G      +   LF+ + +       +T   LL  C
Sbjct: 426 LFYQIPRVNSVPWNTLIACHGFHGHGE-----KAVMLFKEMLDEGVKPDHITFVTLLSAC 480

Query: 170 LSSGYV----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERD 224
             SG V    W  E +       G+       G +V++Y + G++  A KF+     + D
Sbjct: 481 SHSGLVDEGQWCFEMMQ---TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 537

Query: 225 VVLWKVMLRAYAENG 239
             +W  +L A   +G
Sbjct: 538 ASIWGALLSACRVHG 552


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 250/911 (27%), Positives = 422/911 (46%), Gaps = 115/911 (12%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTM-------YSRCGSLVYARRLFDKMPDRDLISWNSI 125
           +  HA+I+   ++P +    NL+TM       Y + G    A ++F     R+ + WNS 
Sbjct: 48  RELHAQII---KMPKK---RNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSF 101

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +  +A  G G++  +   F+      + + F S+  L  +LK+CL+   +W    VH   
Sbjct: 102 IEEFASFG-GDSHEILAVFKELHD--KGVKFDSK-ALTVVLKICLALMELWLGMEVHACL 157

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           +K G   D  +S AL+N+Y K+  I  A  +FD    ++  LW  ++ A   +   E+  
Sbjct: 158 VKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDAL 217

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKL 304
            LF  +  +     D ++  +L     L   +E +Q+  Y I+   +   SN  + N  +
Sbjct: 218 ELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIR---FGRVSNTSICNSIV 274

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           S Y      +  +E       S   ++S ++   +++ A  D LN    +      SG  
Sbjct: 275 SMY----SRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVK 330

Query: 365 SAVIVGNSLINMYSKMGCV------------CGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
             +I  NSL++ +   G               G + D  ++ S L+A   L    +L K+
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLG-CFNLGKE 389

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           IH + +++    D +V T+L+D Y +N  + +AE +F +    ++  WN++I GY     
Sbjct: 390 IHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGL 449

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
              A +L + M   G + D +T  + V                 Y+M    E  L V + 
Sbjct: 450 FDNAEKLLNQMKEEGIKPDLVTWNSLVSG---------------YSMSGRSEEALAVINR 494

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           I  + +                 P+ V+WT MISGC  N     AL  + QM+   V P+
Sbjct: 495 IKSLGL----------------TPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPN 538

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
             T   L++A +  + L+ G +IH   ++     D ++  +L+DMY K G ++ A+ +F+
Sbjct: 539 STTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFR 598

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
            +  +    WN M++G A +G+GEE   LF++M+  GV PD++TF  +LS C  +GLV +
Sbjct: 599 NIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMD 658

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            ++ F  M+  Y I P +EHYS +VD LG+AG   EA + I ++P +A AS+  A+L AC
Sbjct: 659 GWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAAC 718

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM-----KRKNV 827
           R+  D +  +  A  L+ LEP++S+ Y L+ NI++  ++W DV   +  M     K  NV
Sbjct: 719 RLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNV 778

Query: 828 -----------------KKDPAD-LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
                            K  P +  I+ ++  LI  IK+ GYV D + V  ++++ EKE+
Sbjct: 779 WSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKEK 838

Query: 870 ALYYHSEKLARAYGLISTPPSSVI--------------------LSNKEPLY---ANRFH 906
            L  H+EKLA  YGL+ T   S I                    L+    ++     RFH
Sbjct: 839 VLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRFH 898

Query: 907 HLRDGMCPCAD 917
           H  +G C C D
Sbjct: 899 HFMNGECSCKD 909



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 297/671 (44%), Gaps = 59/671 (8%)

Query: 17  YVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSI-LRHAISTSDLLLGKST 75
           Y++++SF ++ + +    S  +L   ++ H       S+  ++ L+  ++  +L LG   
Sbjct: 95  YLLWNSFIEE-FASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEV 153

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA ++      D  L+  L+ +Y +   +  A ++FD+ P ++   WN+I+ A   S   
Sbjct: 154 HACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRS--- 210

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
             E   +   LFR ++ +    +  T+  LL+ C     +   + +HGY ++ G V +  
Sbjct: 211 --EKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTS 268

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           +  ++V++YS+  ++  A+  FD  ++ +   W  ++ +YA N      + L  ++  SG
Sbjct: 269 ICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSG 328

Query: 256 LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
           + PD                                     ++ WN  LSG+L  G    
Sbjct: 329 VKPD-------------------------------------IITWNSLLSGHLLQGSYEN 351

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
            +  F ++  +  + DS +   AL AV G    NLG++IHG  ++S     V V  SL++
Sbjct: 352 VLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVD 411

Query: 376 MYSKMGC------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
            Y K  C      V     ++   A     S    +GL  + +  ++ +K + +    V+
Sbjct: 412 KYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVT 471

Query: 430 -TALIDVYCRNGSMAEAEYLFENKDGFDLA----TWNAMIFGYILSNNSHKALELFSHMH 484
             +L+  Y  +G   EA  +        L     +W AMI G   + N   AL+ FS M 
Sbjct: 472 WNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQ 531

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
               + +  TI T ++AC    +LK G+++H ++M+ GF  D+ +++ ++DMY K G + 
Sbjct: 532 EENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLK 591

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A  +F +I       W  M+ G    G  +   +++ +MR +GV PD  TF  L+    
Sbjct: 592 VAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCK 651

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
               +  G + + + +K D + +P +     +VD+  K G +++A      +  + +  +
Sbjct: 652 NSGLVMDGWK-YFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASI 710

Query: 662 WNAMLVGLAQH 672
           W A+L     H
Sbjct: 711 WGAVLAACRLH 721


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 172/435 (39%), Positives = 251/435 (57%), Gaps = 46/435 (10%)

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V++ ++DMY K G    A  +F  +   D ++WT++++GCV NG  + AL ++ +MR+ G
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + PD+   A ++ A + LT LE G+Q+HAN +K    S   V  SLV MYAKCG IEDA 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F  M++++ + W A++VG AQ+G G E+L  + BM A GV+PD +TFIG+L ACS+ G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV      F  M E YGI+P  EHY+ ++D LGR+G+  EA EL+  M  +  A++ +AL
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L ACRV G+ E G+  A  L  LEP ++  YVLLSN+++AA +W++    R  MK + V 
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K+P                          I++KV+ ++  IKE GYVPD +F L D++EE
Sbjct: 304 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEE 363

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------A 902
            KE  L YHSEKLA A+GL++ PP + I   K                           +
Sbjct: 364 GKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 423

Query: 903 NRFHHLRDGMCPCAD 917
           N FHH R+G C C+D
Sbjct: 424 NCFHHFREGACSCSD 438



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 13/302 (4%)

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
            V+ AL+D+Y + G    A  +FE     D+ +W +++ G + + +  +AL LF  M   
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G   D+I IA  + AC  L +L+ GKQ+HA  +KSG    L V + ++ MY KCG + DA
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
             +F+ +   D + WT +I G   NG    +L+ Y+ M  SGV PD  TF  L+ A S  
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182

Query: 607 TALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNA 664
             +E GR    ++ ++      P     ++D+  + G + +A  L  QM ++ +  +W A
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242

Query: 665 MLVGLAQHGN---GEETL-KLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEAYENFHL 719
           +L     HGN   GE     LFE      +EP ++V ++ + +  S  G   EA +   L
Sbjct: 243 LLAACRVHGNVELGERAANNLFE------LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 296

Query: 720 MR 721
           M+
Sbjct: 297 MK 298



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 5/171 (2%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            + N L+ MY++ G   YA  +F+KM D+D+ISW S++    H+G     +  E  RLF 
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNG-----SYEEALRLFC 57

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            +R       ++ +A +L  C     +   + VH   LK GL     V  +LV++Y+K G
Sbjct: 58  EMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCG 117

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
            I +A  +FD M+ +DV+ W  ++  YA+NG G E  + + B+  SG+ PD
Sbjct: 118 CIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPD 168



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           + G+  DQ  +A+VL A + L   L   KQ+H + +K+   +   V  +L+ +Y + G +
Sbjct: 61  IMGIHPDQIVIAAVLSACAELTV-LEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCI 119

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A  +F++ +  D+ TW A+I GY  +    ++L  ++ M  SG + D IT    + AC
Sbjct: 120 EDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179

Query: 503 GCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-P 556
               +++ G+         Y +K G E   C    ++D+  + G +++A+ + N +   P
Sbjct: 180 SHAGLVEHGRSYFQSMEEVYGIKPGPEHYAC----MIDLLGRSGKLMEAKELLNQMAVQP 235

Query: 557 DDVAWTTMISGCVDNGEEDLA 577
           D   W  +++ C  +G  +L 
Sbjct: 236 DATVWKALLAACRVHGNVELG 256



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++L      + L  GK  HA  L S       + N+L++MY++CG +  A ++FD M  +
Sbjct: 73  AVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQ 132

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
           D+I+W +++  YA +G G      E    +  +  S      +T   LL  C  +G    
Sbjct: 133 DVITWTALIVGYAQNGRGR-----ESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEH 187

Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
              Y  + E V+G  +K G    E  +  ++++  + GK+ EAK L + M  + D  +WK
Sbjct: 188 GRSYFQSMEEVYG--IKPG---PEHYA-CMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241

Query: 230 VMLRAYAENG 239
            +L A   +G
Sbjct: 242 ALLAACRVHG 251



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
           E V+ ALV++Y+K G    A  +F+ M ++DV+ W  ++     NG  EE   LF ++  
Sbjct: 2   ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 254 SGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNS------------- 295
            G+ PD   +  VL   ++L     GK+         +   L  +NS             
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 296 -----------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                      +V+ W   + GY Q G    ++  + BMI S V+ D +TF+  L A +
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACS 180


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/649 (30%), Positives = 320/649 (49%), Gaps = 117/649 (18%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL  D   L ++ +  + L       KQIH  A  +    D+FV  +L  +Y R G M +
Sbjct: 111 GLIPDTHVLPNLFKVCAEL-SAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGD 169

Query: 445 AEYLFENKDGFDLAT-----------------------------------WNAMIFGYIL 469
           A  +F+     D+ T                                   WN ++ G+  
Sbjct: 170 ARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNR 229

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S    +A+ +F  MH  G   D++T+++ + + G    L  G+Q+H Y +K G   D CV
Sbjct: 230 SGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCV 289

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDD------------------------------- 558
            S +LDMY K G +     +F++    +                                
Sbjct: 290 ISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKM 349

Query: 559 ----VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+WT++I+GC  NG++  AL ++ +M+++GV P+  T   ++ A   + AL  GR 
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRS 409

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H   +++    D  VG +L+DMYAKCG I+ + I+F  M  +N V WN+++ G + HG 
Sbjct: 410 THGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGK 469

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            +E + +FE +    ++PD ++F  +LSAC   GL  E ++ F++M E+YGI+P +EHYS
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYS 529

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +V+ LGRAG+ +EA +LI  +PFE  + +  ALL +CR+Q + +  +  A+KL  LEP 
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPE 589

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +   YVL+SNI+AA   W +V S R +M+   +KK+P                       
Sbjct: 590 NPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQ 649

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP--- 888
            D I  K++ + + +++ G+ P+ DF L DVEE+E+E+ L+ HSEKLA  +GL++TP   
Sbjct: 650 IDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709

Query: 889 PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P  VI                   + +E      NRFHH +DG+C C D
Sbjct: 710 PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 272/600 (45%), Gaps = 82/600 (13%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HARIL S    D +++  L+  YS       A  +   +PD  + S++S++ A       
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT----- 92

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
            A+  ++   +F  +           L  L K+C       A + +H  A   GL  D F
Sbjct: 93  KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V G+L ++Y + G++ +A+ +FD M E+DVV    +L  YA  G  EEV  +  ++ +SG
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212

Query: 256 LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
           + P                                     N+V WN  LSG+ + G +  
Sbjct: 213 IEP-------------------------------------NIVSWNGILSGFNRSGYHKE 235

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+  F  M       D VT    L +V  ++NLN+G+QIHG  +K G      V +++++
Sbjct: 236 AVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLD 295

Query: 376 MYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           MY K G V G+    D+F +                               ++ V  A I
Sbjct: 296 MYGKSGHVYGIIKLFDEFEM------------------------------METGVCNAYI 325

Query: 434 DVYCRNGSMAEAEYLF----ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
               RNG + +A  +F    E K   ++ +W ++I G   +    +ALELF  M  +G +
Sbjct: 326 TGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            + +TI + + ACG +  L  G+  H +A++     D+ V S ++DMY KCG +  +Q +
Sbjct: 386 PNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIV 445

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           FN +P  + V W ++++G   +G+    +SI+  +  + + PD  +F  L+ A   +   
Sbjct: 446 FNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505

Query: 610 EQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
           ++G + + N++  +    P +     +V++  + G +++AY L K++    ++ +W A+L
Sbjct: 506 DEGWK-YFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALL 564



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 175/418 (41%), Gaps = 71/418 (16%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           + Q H   +K+    D ++S  LI  Y       +A+ + ++     + +++++I+    
Sbjct: 34  TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTK 93

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           +    +++ +FS M + G   D   +    K C  L   K GKQ+H  A  SG ++D  V
Sbjct: 94  AKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFV 153

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIP----------------------------------- 554
              +  MY++CG M DA+ +F+ +                                    
Sbjct: 154 QGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGI 213

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
            P+ V+W  ++SG   +G    A+ ++ +M   G  PD+ T + ++ +      L  GRQ
Sbjct: 214 EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQ 273

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIE-----------------DAYI-------- 649
           IH  +IK     D  V  +++DMY K G++                  +AYI        
Sbjct: 274 IHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGL 333

Query: 650 ---------LFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
                    LFK+  M  N V W +++ G AQ+G   E L+LF +M+  GV+P+ VT   
Sbjct: 334 VDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPS 393

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +L AC     +     + H    +  +  +V   S L+D   + GR K +  +   MP
Sbjct: 394 MLPACGNIAALGHG-RSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMP 450



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 129/295 (43%), Gaps = 45/295 (15%)

Query: 19  IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
           I S F +  Y        +++ F +  H           S+L     + +L +G+  H  
Sbjct: 223 ILSGFNRSGYHKE-----AVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP----------------------- 115
           ++    + D+ + + ++ MY + G +    +LFD+                         
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337

Query: 116 ------------DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
                       + +++SW SI+A  A +G+       E   LFR ++ +    +R+T+ 
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQNGKD-----IEALELFREMQVAGVKPNRVTIP 392

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            +L  C +   +    + HG+A+++ L+ D  V  AL+++Y+K G+I+ ++ +F+ M  +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK 452

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           ++V W  ++  Y+ +G  +EV  +F  L R+ L PD  S   +L     +G   E
Sbjct: 453 NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 214/685 (31%), Positives = 321/685 (46%), Gaps = 113/685 (16%)

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           I  F  M+   +  DS      +   A    L  G+Q+H   L SG     +V +SL++M
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 377 YSKMGCVCGLRTDQFT-LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           Y            QF  L         LP+                       S+ALI  
Sbjct: 119 YV-----------QFDHLKDARNVFDKLPQ------------------PGVVTSSALISR 149

Query: 436 YCRNGSMAEAEYLF-ENKD---GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           + R G + E + LF + +D     +L +WN MI G+  S +   A+ +F +MH  G + D
Sbjct: 150 FARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPD 209

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             ++++ + A G L M   G Q+H Y +K G   D  V S ++DMY KC    +   +FN
Sbjct: 210 GTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFN 269

Query: 552 DIPAPDD---------------------------------VAWTTMISGCVDNGEEDLAL 578
           ++   D                                  V+WT+MI+ C  NG++  AL
Sbjct: 270 EMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEAL 329

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
            ++ +M++ GV P+  T   L+ A   + AL  G+  H   ++    +D +VG +L+DMY
Sbjct: 330 ELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMY 389

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
           AKCG +  + + F  M  RN V WN+++ G A HG   E + +FE M+  G +PD V+F 
Sbjct: 390 AKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFT 449

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPF 758
            VLSAC+  GL  E +  F  M   +G+E  +EHYS +V  LGR+GR +EA  +I  MPF
Sbjct: 450 CVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPF 509

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           E  + +  ALL +CRV    + G+  A+++  LEP +   Y+LLSNI+A+   W +V   
Sbjct: 510 EPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMV 569

Query: 819 RGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDT 855
           R  M+ + +KK+P                          I  K+  L   +K+ GYVP T
Sbjct: 570 RDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHT 629

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS---SVILS----------------- 895
           DFVL DVEE++KE+ L  HSEKLA   GL++T P     VI +                 
Sbjct: 630 DFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDF 689

Query: 896 NKEPLY---ANRFHHLRDGMCPCAD 917
            K  ++    NRFH  + G+C C D
Sbjct: 690 EKREIFVRDTNRFHQFKGGVCSCGD 714



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 232/536 (43%), Gaps = 88/536 (16%)

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           L + I   SR+ L  ++K C +   +   + +H +AL  GL  D  V  +L+++Y +F  
Sbjct: 66  LTQGIVPDSRV-LPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDH 124

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           +++A+ +FD + +  VV    ++  +A  G  +E   LF                     
Sbjct: 125 LKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFY-------------------- 164

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                     Q +   ++L       N+V WN  +SG+ + G    A+  F NM    ++
Sbjct: 165 ----------QTRDLGVEL-------NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLK 207

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            D  +    L AV   D   +G QIH   +K G      V ++LI+MY K  C       
Sbjct: 208 PDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCAC------- 260

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
                     +S +    +   ++ V A             AL+    RNG +  A  +F
Sbjct: 261 ----------ASEMSGVFNEMDEVDVGA-----------CNALVTGLSRNGLVDNALEVF 299

Query: 450 ENKDGFDL--ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +   G DL   +W +MI     +    +ALELF  M   G + + +TI   + ACG +  
Sbjct: 300 KQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAA 359

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L  GK  H +++++G   D+ V S ++DMY KCG M+ ++  F+ +P  + V+W ++++G
Sbjct: 360 LLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAG 419

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG----------RQIHA 617
              +G+   A++I+  M+  G  PD  +F  ++ A +     E+G            + A
Sbjct: 420 YAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEA 479

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
            +    C         +V +  + G +E+AY + KQM    ++ +W A+L     H
Sbjct: 480 RMEHYSC---------MVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVH 526



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 151/344 (43%), Gaps = 71/344 (20%)

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           N+    + +FS+M T G   D   + T +K C  L  L+ GKQMH +A+ SG  LD  V 
Sbjct: 53  NHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVL 112

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAP---------------------------------- 556
           S +L MYV+   + DA+++F+ +P P                                  
Sbjct: 113 SSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVE 172

Query: 557 -DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            + V+W  MISG   +G    A+ ++  M L G+ PD  + + ++ A   L     G QI
Sbjct: 173 LNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQI 232

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKC-------------------------------GNI 644
           H  +IK     D FV  +L+DMY KC                               G +
Sbjct: 233 HCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLV 292

Query: 645 EDAYILFKQ---MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           ++A  +FKQ   MD+ N V W +M+   +Q+G   E L+LF +M+  GV+P+SVT   +L
Sbjct: 293 DNALEVFKQFKGMDL-NVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLL 351

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
            AC     +    +  H    + GI  +V   S L+D   + GR
Sbjct: 352 PACGNIAALLHG-KAAHCFSLRNGIFNDVYVGSALIDMYAKCGR 394



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 39/272 (14%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDL-LLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
             Q  H           S +  A+   D+ L+G   H  ++     PD+F+ + L+ MY 
Sbjct: 197 MFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYG 256

Query: 100 RCGSLVYARRLFDKMPDRDL---------------------------------ISWNSIL 126
           +C        +F++M + D+                                 +SW S++
Sbjct: 257 KCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMI 316

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A+ + +G+       E   LFR ++      + +T+  LL  C +   +   +  H ++L
Sbjct: 317 ASCSQNGKD-----MEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSL 371

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           + G+  D +V  AL+++Y+K G++  ++  FD M  R++V W  ++  YA +G   E  +
Sbjct: 372 RNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAIN 431

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +F  + R G  PD  S  CVL   +  G   E
Sbjct: 432 IFELMQRCGQKPDHVSFTCVLSACTQGGLTEE 463



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 135/354 (38%), Gaps = 69/354 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++++   + S L  GK  H   L S    D  + ++L+ MY +   L  AR +FDK+P  
Sbjct: 79  TVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQP 138

Query: 118 DLISWNSILAAYAHSGEGNA--------------------ENVTEGFRLFRSLRESITFT 157
            +++ +++++ +A  G                          +  GF    S  +++   
Sbjct: 139 GVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMF 198

Query: 158 SRLTLAPLLKLCLSSGYVWASE----------TVHGYALKIGLVWDEFVSGALVNIYSKF 207
             + L  L     S   V  +            +H Y +K GL  D+FV  AL+++Y K 
Sbjct: 199 QNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKC 258

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
               E   +F+ M E DV     ++   + NG  +    +F       L           
Sbjct: 259 ACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDL----------- 307

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       NVV W   ++   Q G +  A+E F  M    
Sbjct: 308 ----------------------------NVVSWTSMIASCSQNGKDMEALELFREMQIEG 339

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           V+ +SVT    L A      L  G+  H  +L++G ++ V VG++LI+MY+K G
Sbjct: 340 VKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCG 393



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           LL GK+ H   L +    D ++ + L+ MY++CG ++ +R  FD MP+R+L+SWNS++A 
Sbjct: 360 LLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAG 419

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-------YVWASETV 181
           YA  G+       E   +F  ++        ++   +L  C   G       Y  +    
Sbjct: 420 YAMHGK-----TFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
           HG   ++     E  S  +V +  + G++ EA  +   M  E D  +W  +L
Sbjct: 475 HGVEARM-----EHYS-CMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALL 520


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 189/593 (31%), Positives = 308/593 (51%), Gaps = 53/593 (8%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           A A+ L       NVV W   +SGY + G    A+  F +M+ S V  +      AL A 
Sbjct: 65  ADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVAC 124

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------- 383
           A    L  G+Q+H   +++GF     +G+ LI MYS+ G +                   
Sbjct: 125 ADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYT 184

Query: 384 ------C------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                 C                  GL+ ++ T+ ++L A   +     L +QIH + IK
Sbjct: 185 SLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV-----LGQQIHGYLIK 239

Query: 420 NDTVADSFV--STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
              +    V  STALID Y RNG    A+ +F++    ++ +W +M+  YI      +AL
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           ++F  M + G   +E  ++  + ACG + +   G+Q+H  A+K     D+ VS+ +L MY
Sbjct: 300 QVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMY 356

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            + G + + +++ N I  PD V+WTT IS    NG  + A+++  QM   G  P+ + F+
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFS 416

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ + + + +L+QG Q H   +KL C S+   G +L++MY+KCG +  A + F  M   
Sbjct: 417 SVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 476

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           +   WN+++ G AQHG+  + L++F  M+++G++PD  TF+GVL  C+++G+V E    F
Sbjct: 477 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFF 536

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
            LM ++Y   P   HY+ ++D LGR GR  EA  +I  MPFE  A + + LL +C++  +
Sbjct: 537 RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRN 596

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
            + GK  A++LM L   DS++YVL+SNI+A   +W+D    R  M    VKKD
Sbjct: 597 LDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKD 649



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 243/569 (42%), Gaps = 103/569 (18%)

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
           ++ PD  L    +    + G L  A  LFD+MP +++++W S+++ Y  +G   A     
Sbjct: 43  AESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEA----- 97

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
              +F  + ES    +       L  C   G + A E VH  A++ G   D ++   L+ 
Sbjct: 98  ALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIE 157

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +YS+ G +  AK +FD M   DVV +  ++ A+  NG  E      + + + GL P++ +
Sbjct: 158 MYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHT 217

Query: 263 VQCVLGVISD-LGKRHEEQVQAYAIKLL---------------LYNNN------------ 294
           +  +L      LG    +Q+  Y IK +                Y+ N            
Sbjct: 218 MTTILTACPRVLG----QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDS 273

Query: 295 ---SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               NVV W   +  Y++ G    A++ F +MI   V  +     + L A     ++ LG
Sbjct: 274 LHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLG 330

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
           +Q+H + +K    + + V N+L++MY + G V                            
Sbjct: 331 RQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQN 390

Query: 384 ----------CGLRTDQFT-----LASVLRAS---SSLPEGLHLSKQIHVHAIKNDTVAD 425
                     C + ++ FT      +SVL +    +SL +G+    Q H  A+K    ++
Sbjct: 391 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM----QFHCLALKLGCDSE 446

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
                ALI++Y + G M  A   F+     D+ +WN++I G+    +++KALE+FS M +
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 506

Query: 486 SGERLDEITIATAVKACGCLLMLKQGK-----QMHAYAMKSGFELDLCVSSGILDMYVKC 540
           +G + D+ T    +  C    M+++G+      +  Y+         C    ++DM  + 
Sbjct: 507 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC----MIDMLGRN 562

Query: 541 GAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           G   +A  + ND+P  PD + W T+++ C
Sbjct: 563 GRFDEALRMINDMPFEPDALIWKTLLASC 591



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 173/354 (48%), Gaps = 27/354 (7%)

Query: 414 HVHAIKNDTVADSFVSTALIDVYC-----------------RNGSMAEAEYLFENKDGFD 456
           HV + +   V D   S A  D  C                 ++G +A+A  LF+     +
Sbjct: 19  HVPSRRRRRVCDGLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKN 78

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  W +++ GY  +     AL +F+ M  SG   ++     A+ AC  L  L+ G+Q+H+
Sbjct: 79  VVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHS 138

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            A+++GF  D  + S +++MY +CG++  A+ +F+ + +PD V +T++IS    NGE +L
Sbjct: 139 LAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFEL 198

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC--SSDPFVGISL 634
           A     QM   G+ P+E T   ++ A  C   L  G+QIH  LIK     S   +   +L
Sbjct: 199 AAEALIQMLKQGLKPNEHTMTTILTA--CPRVL--GQQIHGYLIKKIGLRSQSVYSSTAL 254

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +D Y++ G  + A  +F  +  +N V W +M+    + G  EE L++F DM + GV+P+ 
Sbjct: 255 IDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNE 314

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
                VL AC   GL  +     H    K+ +  ++   + L+   GR G  +E
Sbjct: 315 FALSIVLGACGSIGLGRQ----LHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 364



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 161/348 (46%), Gaps = 51/348 (14%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H+  + +    D ++ + L+ MYSRCGSL  A+ +FD+M   D++ + S+++A
Sbjct: 130 LRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA 189

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESI-----TFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           +  +GE   E   E   L + L++ +     T T+ LT  P +            + +HG
Sbjct: 190 FCRNGE--FELAAEA--LIQMLKQGLKPNEHTMTTILTACPRV----------LGQQIHG 235

Query: 184 YAL-KIGLVWDE-FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           Y + KIGL     + S AL++ YS+ G+ + AK +FD +  ++VV W  M++ Y  +G  
Sbjct: 236 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 295

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK-------------L 288
           EE   +F D+   G+ P++ ++  VLG    +G     Q+   AIK             L
Sbjct: 296 EEALQVFGDMISEGVDPNEFALSIVLGACGSIGL--GRQLHCSAIKHDLITDIRVSNALL 353

Query: 289 LLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y                 N ++V W   +S   Q G    AI     M       +  
Sbjct: 354 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGY 413

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            F   L++ A   +L+ G Q H   LK G  S +  GN+LINMYSK G
Sbjct: 414 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 461



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H   +    I D  ++N L++MY R G +     + +K+ + DL+SW + ++A  
Sbjct: 329 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 388

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G G      +   L   +       +    + +L  C     +      H  ALK+G 
Sbjct: 389 QNGFGE-----KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +     AL+N+YSK G++  A+  FD M   DV  W  ++  +A++G   +   +F  
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           +  +G+ PDD +    LGV+  +G  H   V+
Sbjct: 504 MRSNGIKPDDST---FLGVL--MGCNHSGMVE 530



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 22/241 (9%)

Query: 1   MYTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFS-I 59
           +  +L+A L        V +++     ++N   F    +  L + H    + +   FS +
Sbjct: 361 LVEELEAMLNKIENPDLVSWTTAISANFQN--GFGEKAIALLCQMHSEGFTPNGYAFSSV 418

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L      + L  G   H   L      +    N L+ MYS+CG +  AR  FD M   D+
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
            SWNS++  +A  G+ N     +   +F  +R +       T   +L  C  SG V   E
Sbjct: 479 TSWNSLIHGHAQHGDAN-----KALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 533

Query: 180 TVHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
                 L   L+ D++           ++++  + G+  EA  + + M  E D ++WK +
Sbjct: 534 ------LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587

Query: 232 L 232
           L
Sbjct: 588 L 588


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 186/580 (32%), Positives = 304/580 (52%), Gaps = 53/580 (9%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   +SGY + G    A+  F +M+ S V  +      AL A A    L  G+Q+H
Sbjct: 5   NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 64

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------C------ 384
              +++GF     +G+ LI MYS+ G +                         C      
Sbjct: 65  SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 124

Query: 385 ------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV--ST 430
                       GL+ ++ T+ ++L A   +     L +QIH + IK   +    V  ST
Sbjct: 125 LAAEALIQMLKQGLKPNEHTMTTILTACPRV-----LGQQIHGYLIKKIGLRSQSVYSST 179

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ALID Y RNG    A+ +F++    ++ +W +M+  YI      +AL++F  M + G   
Sbjct: 180 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 239

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           +E  ++  + ACG + +   G+Q+H  A+K     D+ VS+ +L MY + G + + +++ 
Sbjct: 240 NEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAML 296

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           N I  PD V+WTT IS    NG  + A+++  QM   G  P+ + F+ ++ + + + +L+
Sbjct: 297 NKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLD 356

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           QG Q H   +KL C S+   G +L++MY+KCG +  A + F  M   +   WN+++ G A
Sbjct: 357 QGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHA 416

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           QHG+  + L++F  M+++G++PD  TF+GVL  C+++G+V E    F LM ++Y   P  
Sbjct: 417 QHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAP 476

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
            HY+ ++D LGR GR  EA  +I  MPFE  A + + LL +C++  + + GK  A++LM 
Sbjct: 477 SHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLME 536

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           L   DS++YVL+SNI+A   +W+D    R  M    VKKD
Sbjct: 537 LSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKD 576



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 229/538 (42%), Gaps = 103/538 (19%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           MP +++++W S+++ Y  +G   A        +F  + ES    +       L  C   G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEA-----ALAMFADMVESGVAPNDFACNAALVACADLG 55

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            + A E VH  A++ G   D ++   L+ +YS+ G +  AK +FD M   DVV +  ++ 
Sbjct: 56  ALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLIS 115

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIKLL--- 289
           A+  NG  E      + + + GL P++ ++  +L      LG    +Q+  Y IK +   
Sbjct: 116 AFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLG----QQIHGYLIKKIGLR 171

Query: 290 ------------LYNNN---------------SNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                        Y+ N                NVV W   +  Y++ G    A++ F +
Sbjct: 172 SQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGD 231

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           MI   V  +     + L A     ++ LG+Q+H + +K    + + V N+L++MY + G 
Sbjct: 232 MISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGL 288

Query: 383 V--------------------------------------CGLRTDQFT-----LASVLRA 399
           V                                      C + ++ FT      +SVL +
Sbjct: 289 VEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSS 348

Query: 400 S---SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
               +SL +G+    Q H  A+K    ++     ALI++Y + G M  A   F+     D
Sbjct: 349 CADVASLDQGM----QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHD 404

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK---- 512
           + +WN++I G+    +++KALE+FS M ++G + D+ T    +  C    M+++G+    
Sbjct: 405 VTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR 464

Query: 513 -QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             +  Y+         C    ++DM  + G   +A  + ND+P  PD + W T+++ C
Sbjct: 465 LMIDQYSFTPAPSHYAC----MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASC 518



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 161/348 (46%), Gaps = 51/348 (14%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H+  + +    D ++ + L+ MYSRCGSL  A+ +FD+M   D++ + S+++A
Sbjct: 57  LRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA 116

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESI-----TFTSRLTLAPLLKLCLSSGYVWASETVHG 183
           +  +GE   E   E   L + L++ +     T T+ LT  P +            + +HG
Sbjct: 117 FCRNGE--FELAAEA--LIQMLKQGLKPNEHTMTTILTACPRV----------LGQQIHG 162

Query: 184 YAL-KIGLVWDE-FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           Y + KIGL     + S AL++ YS+ G+ + AK +FD +  ++VV W  M++ Y  +G  
Sbjct: 163 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 222

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK-------------L 288
           EE   +F D+   G+ P++ ++  VLG    +G     Q+   AIK             L
Sbjct: 223 EEALQVFGDMISEGVDPNEFALSIVLGACGSIGL--GRQLHCSAIKHDLITDIRVSNALL 280

Query: 289 LLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y                 N ++V W   +S   Q G    AI     M       +  
Sbjct: 281 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGY 340

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            F   L++ A   +L+ G Q H   LK G  S +  GN+LINMYSK G
Sbjct: 341 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 388



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 86/152 (56%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + VAWT+++SG   NG  + AL+++  M  SGV P++F     + A + L AL  G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
            Q+H+  ++   + D ++G  L++MY++CG++  A  +F +MD  + V + +++    ++
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           G  E   +    M   G++P+  T   +L+AC
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTAC 152



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LG+  H   +    I D  ++N L++MY R G +     + +K+ + DL+SW + ++A  
Sbjct: 256 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 315

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G G      +   L   +       +    + +L  C     +      H  ALK+G 
Sbjct: 316 QNGFGE-----KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 370

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +     AL+N+YSK G++  A+  FD M   DV  W  ++  +A++G   +   +F  
Sbjct: 371 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 430

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           +  +G+ PDD +    LGV+  +G  H   V+
Sbjct: 431 MRSNGIKPDDST---FLGVL--MGCNHSGMVE 457



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 19/149 (12%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L+ MYS+CG +  AR  FD M   D+ SWNS++  +A  G+ N     +   +F  +R
Sbjct: 378 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDAN-----KALEVFSKMR 432

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV-------SGALVNIY 204
            +       T   +L  C  SG V   E      L   L+ D++           ++++ 
Sbjct: 433 SNGIKPDDSTFLGVLMGCNHSGMVEEGE------LFFRLMIDQYSFTPAPSHYACMIDML 486

Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
            + G+  EA  + + M  E D ++WK +L
Sbjct: 487 GRNGRFDEALRMINDMPFEPDALIWKTLL 515



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  +N V W +++ G  ++G  E  L +F DM   GV P+       L AC+  G +  A
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGAL-RA 59

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            E  H +  + G   +    S L++   R G    A E+   M
Sbjct: 60  GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 102


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 194/591 (32%), Positives = 303/591 (51%), Gaps = 84/591 (14%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K +H   ++     DS++   ++      G+   +  +F      ++  +N MI G +L+
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           ++  +++E++  M   G   D  T    +KAC  LL  K G ++H   +K+G E D  V+
Sbjct: 87  DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAP---------------------------------- 556
           + ++ +Y KCG + +A  +F+DIP                                    
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206

Query: 557 ----DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
               D V+W++MI G   NG    AL ++ +M   G  PD +    ++ A + L ALE G
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
                 + + +   +P +G +L+DMYAKCG ++ A+ +F+ M  ++ V+WNA + GLA  
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+ +    LF  M+  G+EPD  TF+G+L AC++ GLV E  + F+ M   + + PE+EH
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y  +VD LGRAG   EA +L+ SMP EA+A +  ALLG CR+  DT+  + V ++L+ALE
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALE 446

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------------- 831
           P +S  YVLLSNI++A+++W+D    R  M  + +KK P                     
Sbjct: 447 PSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSH 506

Query: 832 --ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
             ++ I+AK+  L+K +K  GYVP TD+VL D+EEEEKE  +  HSEKLA A+GLIST P
Sbjct: 507 PLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAP 566

Query: 890 SSVI---------------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
           +  I                      + +E +    NRFH   DG C C D
Sbjct: 567 NDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKD 617



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 191/436 (43%), Gaps = 43/436 (9%)

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
           H+   L R GL  D   +  VL    + G  +      Y+ ++       N+ L+N  + 
Sbjct: 28  HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTN------YSHRIFHQTKEPNIFLFNTMIH 81

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           G +       +IE + +M +  +  DS TF   L A A   +  LG ++HG  +K+G  S
Sbjct: 82  GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
              V  SL+++Y K    CG   + F      +    +PE             KN  VA 
Sbjct: 142 DAFVNTSLVSLYGK----CGFIDNAF------KVFDDIPE-------------KN--VA- 175

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENK----DGF---DLATWNAMIFGYILSNNSHKALE 478
               TA+I  Y   G   EA  +F       DG    D+ +W++MI GY  +    +AL+
Sbjct: 176 --AWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALD 233

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M   G R D   +   + AC  L  L+ G        ++ F  +  + + ++DMY 
Sbjct: 234 LFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYA 293

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG M  A  +F  +   D V W   ISG   +G    A  ++ QM  SG+ PD  TF  
Sbjct: 294 KCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVG 353

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMR 657
           L+ A +    +++GRQ   ++ ++   +        +VD+  + G +++A+ L K M M 
Sbjct: 354 LLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME 413

Query: 658 -NTVLWNAMLVGLAQH 672
            N ++W A+L G   H
Sbjct: 414 ANAIVWGALLGGCRLH 429



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 127/288 (44%), Gaps = 41/288 (14%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           LK  K +HA  ++ G + D  + + +L      G    +  IF+    P+   + TMI G
Sbjct: 23  LKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHG 82

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            V N     ++ IYH MR  G+ PD FTF  L+KA + L   + G ++H  ++K  C SD
Sbjct: 83  LVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESD 142

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNT---------------------------- 659
            FV  SLV +Y KCG I++A+ +F  +  +N                             
Sbjct: 143 AFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACS 202

Query: 660 ----------VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
                     V W++M+ G A +G  +E L LF  M   G  PD    +GVL AC+  G 
Sbjct: 203 VFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGA 262

Query: 710 VSEAYENFHLM-REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           +       +LM R ++   P +   + L+D   + GR   A E+   M
Sbjct: 263 LELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGM 308



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 132/348 (37%), Gaps = 72/348 (20%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA +L      D +L N ++      G+  Y+ R+F +  + ++  +N+++     +
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
                ++  E   ++ S+R+        T   LLK C           +HG  +K G   
Sbjct: 87  -----DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141

Query: 193 DEFVSGALVNIYSKFGKI--------------------------------------REAK 214
           D FV+ +LV++Y K G I                                      R A 
Sbjct: 142 DAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRAC 201

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FDGM E+D+V W  M++ YA NG  +E   LF  +   G  PD  ++  VL   + LG
Sbjct: 202 SVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLG 261

Query: 275 ------------KRHE---------EQVQAY--------AIKLLLYNNNSNVVLWNKKLS 305
                        R+E           +  Y        A ++       ++V+WN  +S
Sbjct: 262 ALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAIS 321

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           G    G    A   F  M +S ++ D  TF+  L A      ++ G+Q
Sbjct: 322 GLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQ 369



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 119/252 (47%), Gaps = 39/252 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D  LG   H  ++ +    D F+  +L+++Y +CG +  A ++FD +P+++
Sbjct: 114 LLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKN 173

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFR----LFRSLRES--ITFTSRL-----------T 161
           + +W +I++ Y   G G      + FR    +F  + E   ++++S +            
Sbjct: 174 VAAWTAIISGYI--GVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEA 231

Query: 162 LAPLLKLCLSSGY---VWASETVHGYALKIGLV----W-------DEFVSG-----ALVN 202
           L    K+ L+ G+    +A   V     ++G +    W       +EF+       AL++
Sbjct: 232 LDLFFKM-LNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALID 290

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y+K G++  A  +F GM+++D+V+W   +   A +G  +  F LF  + +SG+ PD  +
Sbjct: 291 MYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNT 350

Query: 263 VQCVLGVISDLG 274
              +L   +  G
Sbjct: 351 FVGLLCACTHAG 362



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 8/182 (4%)

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           I ++      +L+  + +HA L++L    D ++   ++      GN   ++ +F Q    
Sbjct: 12  IKIRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEP 71

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N  L+N M+ GL  + + +E+++++  M+  G+ PDS TF  +L AC+   L S+     
Sbjct: 72  NIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARL-LDSKLGIKL 130

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL------GA 771
           H +  K G E +    + LV   G+ G    A ++   +P E + +   A++      G 
Sbjct: 131 HGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGK 189

Query: 772 CR 773
           CR
Sbjct: 190 CR 191



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 14/160 (8%)

Query: 82  SSQIPDR--FLTNN-----LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           +S + DR  FL N      L+ MY++CG +  A  +F  M  +D++ WN+ ++  A SG 
Sbjct: 269 ASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG- 327

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
               +V   F LF  + +S       T   LL  C  +G V           ++  +  E
Sbjct: 328 ----HVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPE 383

Query: 195 FVS-GALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML 232
               G +V++  + G + EA  L   M  E + ++W  +L
Sbjct: 384 IEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALL 423


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 214/708 (30%), Positives = 340/708 (48%), Gaps = 95/708 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  + GY + G    A+  +  M+   ++ D  TF   L    G  +L  G+++H   +
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222

Query: 360 KSGFYSAVIVGNSLINMYSKMG--------------------------------CVCGLR 387
           + GF S V V N+LI MY K G                                C+ GLR
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282

Query: 388 -----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                       D  T+ SV+ A  +L +   L +++H + IK   VA+  V+ +LI ++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDE-RLGREVHGYVIKTGFVAEVSVNNSLIQMH 341

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
              G   EAE +F   +  DL +W AMI GY  +    KA+E ++ M   G   DEITIA
Sbjct: 342 SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIA 401

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + + AC  L +L +G  +H +A ++G    + V++ ++DMY KC  +  A  +F+ IP  
Sbjct: 402 SVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + ++WT++I G   N     AL  + QM LS + P+  T   ++ A + + AL  G++IH
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIH 520

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A+ ++     D F+  +L+DMY +CG +E A+  F   + ++   WN +L G AQ G G 
Sbjct: 521 AHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGG 579

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
             ++LF  M    V PD +TF  +L ACS +G+V++  E F  M  K+ I P ++HY+ +
Sbjct: 580 LAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV 639

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAGR ++A E I  MP +   ++  ALL ACR+  + E G+  A+ +  ++    
Sbjct: 640 VDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSV 699

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
             Y+LL N++A + +WD+V   R  M+   +  DP                         
Sbjct: 700 GYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIK 759

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I A +EG  ++++  G     D    D++  + E     HSE+LA A+GLI+T P + I
Sbjct: 760 EINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAE-IFCGHSERLAIAFGLINTVPGTPI 818

Query: 894 LSNKEPLY------------------------ANRFHHLRDGMCPCAD 917
              K  LY                          +FHH +DG+C C D
Sbjct: 819 WVTKN-LYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 233/553 (42%), Gaps = 82/553 (14%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L++M+ R G LV A  +F KM +RDL SWN ++  YA +G  +     E   L+  
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFD-----EALNLYHR 185

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +          T   +L+ C     +     VH + ++ G   D  V  AL+ +Y K G 
Sbjct: 186 MLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGD 245

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           I  A+ +FD M  RD + W  M+  Y EN    E   LF  +    + PD  ++  V+  
Sbjct: 246 IFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA 305

Query: 270 ISDLG-KRHEEQVQAYAIKLLLYN----NNS------------------------NVVLW 300
              LG +R   +V  Y IK         NNS                        ++V W
Sbjct: 306 CEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSW 365

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +SGY + G    A+E +  M    V  D +T    L+A AG   L+ G  +H    +
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425

Query: 361 SGFYSAVIVGNSLINMYSKMGC-------------------------------------- 382
           +G  S VIV NSLI+MYSK  C                                      
Sbjct: 426 TGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFF 485

Query: 383 ----VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
               +  L+ +  TL SVL A + +   L   K+IH HA++     D F+  AL+D+Y R
Sbjct: 486 FQQMILSLKPNSVTLVSVLSACARIG-ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G M  A   F + +  D+A+WN ++ GY        A+ELF  M  S    DEIT  + 
Sbjct: 545 CGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
           + AC    M+  G + +  +M+  F +  +L   + ++D+  + G + DA      +P  
Sbjct: 604 LCACSRSGMVTDGLE-YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPID 662

Query: 556 PDDVAWTTMISGC 568
           PD   W  +++ C
Sbjct: 663 PDPAIWGALLNAC 675



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 184/359 (51%), Gaps = 1/359 (0%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H +  K  T     +  AL+ ++ R G + EA Y+F      DL +WN ++ GY  + 
Sbjct: 115 RVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG 174

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +AL L+  M   G R D  T    ++ CG L  L +G+++H + ++ GFE D+ V +
Sbjct: 175 YFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN 234

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MYVKCG +  A+ +F+ +P  D ++W  MISG  +N      L ++  MR   V P
Sbjct: 235 ALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDP 294

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D  T   ++ A   L     GR++H  +IK    ++  V  SL+ M++  G  ++A ++F
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVF 354

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M+ ++ V W AM+ G  ++G  E+ ++ +  M+  GV PD +T   VLSAC+  GL+ 
Sbjct: 355 SKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLD 414

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           +     H   ++ G+   V   + L+D   +     +A E+   +P +   S    +LG
Sbjct: 415 KGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 35/352 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR      DL  G+  H  ++      D  + N L+TMY +CG +  AR +FD+MP RD
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            ISWN++++ Y  +     +   EG RLF  +RE       +T+  ++  C + G     
Sbjct: 261 RISWNAMISGYFEN-----DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             VHGY +K G V +  V+ +L+ ++S  G   EA+ +F  M+ +D+V W  M+  Y +N
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHE-------------- 278
           G  E+    +  +   G+ PD+ ++  VL   + LG        HE              
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVA 435

Query: 279 -EQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              +  Y        A+++     N NV+ W   + G      +  A+  F  MI S ++
Sbjct: 436 NSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LK 494

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            +SVT +  L+A A    L+ G++IH   L++G      + N+L++MY + G
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 7/265 (2%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N++I    L  +  KAL     M      ++E T    ++ C       +G ++H+Y  K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +   L + + + +L M+V+ G +V+A  +F  +   D  +W  ++ G    G  D AL++
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           YH+M   G+ PD +TF  +++    L  L +GR++H ++I+    SD  V  +L+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+I  A ++F +M  R+ + WNAM+ G  ++    E L+LF  M+   V+PD +T   V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 701 LSACSYTGLVSEAYENFHLMREKYG 725
           +SAC       EA  +  L RE +G
Sbjct: 303 ISAC-------EALGDERLGREVHG 320



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 34/314 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    +  D  LG+  H  ++ +  + +  + N+L+ M+S  G    A  +F KM  +
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SW ++++ Y  +G    E   E + +   +         +T+A +L  C   G +  
Sbjct: 361 DLVSWTAMISGYEKNGL--PEKAVETYTI---MEHEGVVPDEITIASVLSACAGLGLLDK 415

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H +A + GL     V+ +L+++YSK   I +A  +F  +  ++V+ W  ++     
Sbjct: 416 GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRL 475

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLL------ 290
           N    E    F  +  S L P+  ++  VL   + +G     +++ A+A++  L      
Sbjct: 476 NYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFL 534

Query: 291 --------------------YNN-NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                               +N+   +V  WN  L+GY Q G    A+E F  MI S+V 
Sbjct: 535 PNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594

Query: 330 YDSVTFLVALAAVA 343
            D +TF   L A +
Sbjct: 595 PDEITFTSLLCACS 608



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 8/202 (3%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           S   L F Q+   S   +S    S+L        L  GK  HA  L +    D FL N L
Sbjct: 479 SFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY RCG +  A   F+   ++D+ SWN +L  YA  G+G          LF  + ES 
Sbjct: 539 LDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGL-----AVELFHKMIESD 592

Query: 155 TFTSRLTLAPLLKLCLSSGYVWAS-ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                +T   LL  C  SG V    E       K  +  +     ++V++  + G++ +A
Sbjct: 593 VNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDA 652

Query: 214 KFLFDGMQ-ERDVVLWKVMLRA 234
                 M  + D  +W  +L A
Sbjct: 653 YEFIKKMPIDPDPAIWGALLNA 674


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 188/546 (34%), Positives = 290/546 (53%), Gaps = 47/546 (8%)

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           I N    D ++   ++ ++ + G M +A  LF+     +L +WN +I G +   +  +A 
Sbjct: 2   IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAF 61

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LF +M          T A  ++A   L ++  G+Q+HA  +K G   D+ VS  ++DMY
Sbjct: 62  RLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMY 121

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG++ DA+ +F ++P    V W T+I+G   +G  + AL +Y++MR SGV  D FTF+
Sbjct: 122 SKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFS 181

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           ++V+  + L ++E  +Q HA LI+    SD     +LVD Y+K G IEDA  +F +M  +
Sbjct: 182 MIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASK 241

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N + WNA++ G   HG G E ++LFE M    + P+ +TF+ VLSACS++GL    +E F
Sbjct: 242 NVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIF 301

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
             M     I+P   HY+ +++ +GR G   EA  LI   PF+ +A+M  ALL ACRV  +
Sbjct: 302 QSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNEN 361

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----- 832
            E GK+ AEKL  +EP   + Y++L NI+ +A    +       +KRK ++  P      
Sbjct: 362 FELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIE 421

Query: 833 ------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                               I+ KV+ L+  I + GYVP+   +L DV+E+E ER   YH
Sbjct: 422 VKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQE-ERVRLYH 480

Query: 875 SEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANRFHHLRDG 911
           SEKLA A+GLISTP   P  ++                  ++ +E +   A RFHH + G
Sbjct: 481 SEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHG 540

Query: 912 MCPCAD 917
            C C D
Sbjct: 541 HCSCED 546



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 176/337 (52%), Gaps = 8/337 (2%)

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           FT A ++RAS+ L E + + +Q+H   +K     D FVS ALID+Y + GS+ +A ++FE
Sbjct: 77  FTFAVMIRASAGL-ELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFE 135

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                    WN +I GY L   S +AL+++  M  SG ++D  T +  V+ C  L  ++ 
Sbjct: 136 EMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEH 195

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            KQ HA  ++ GF  D+  ++ ++D Y K G + DA+ +F+ + + + ++W  +I G  +
Sbjct: 196 AKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGN 255

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +G    A+ ++ QM    + P+  TF  ++ A S     E+G +I  ++ + D    P  
Sbjct: 256 HGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGR-DNRIKPRA 314

Query: 631 G--ISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKA 687
                ++++  + G +++A  L +    + T  +W A+L     + N E  L  F   K 
Sbjct: 315 MHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFE--LGKFAAEKL 372

Query: 688 HGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREK 723
           +G+EPD +  +I +L+  +  G + EA +  H ++ K
Sbjct: 373 YGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRK 409



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 34/297 (11%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D+++ N ++ M+ +CG ++ ARRLFD+MP+R+L+SWN+I++     G     +  E FRL
Sbjct: 9   DQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVG-----DFMEAFRL 63

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F ++ E  +     T A +++       +     +H   LK+G+  D FVS AL+++YSK
Sbjct: 64  FLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSK 123

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G I +A+F+F+ M E+  V W  ++  YA +G+ EE   ++ ++  SG+  D  +   +
Sbjct: 124 CGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMI 183

Query: 267 LGVISDLGK-RHEEQVQAYAIK-------------LLLYNN---------------NSNV 297
           + + + L    H +Q  A  I+             +  Y+                + NV
Sbjct: 184 VRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNV 243

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           + WN  + GY   G    A+E F  MI+  +  + +TFL  L+A + +     G +I
Sbjct: 244 ISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 66/359 (18%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+V WN  +SG + VGD   A   F+NM        S TF V + A AG + +++G+Q+H
Sbjct: 40  NLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLH 99

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
             TLK G    + V  +LI+MYSK G +                                
Sbjct: 100 ACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSE 159

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ D FT + ++R  + L    H +KQ H   I++   +D   +TAL
Sbjct: 160 EALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEH-AKQAHAALIRHGFGSDIVANTAL 218

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D Y + G + +A ++F+     ++ +WNA+I GY       +A+ELF  M       + 
Sbjct: 219 VDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNH 278

Query: 493 ITIATAVKAC--------GCLLMLKQGK--QMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           IT    + AC        G  +    G+  ++   AM     ++L    G+LD       
Sbjct: 279 ITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLD------- 331

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             +A ++    P  P    W  +++ C  N  E+  L  +   +L G+ PD+    I++
Sbjct: 332 --EALALIRGAPFKPTANMWAALLTACRVN--ENFELGKFAAEKLYGMEPDKLNNYIVL 386



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 6/226 (2%)

Query: 50  SSSSSQWFSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           S + S  F+++  A +  +L+ +G+  HA  L      D F++  L+ MYS+CGS+  AR
Sbjct: 72  SDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDAR 131

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            +F++MP++  + WN+I+A YA  G        E   ++  +R+S       T + ++++
Sbjct: 132 FVFEEMPEKTTVGWNTIIAGYALHGYSE-----EALDMYYEMRDSGVKMDHFTFSMIVRI 186

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     V  ++  H   ++ G   D   + ALV+ YSK+G+I +A+ +FD M  ++V+ W
Sbjct: 187 CARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISW 246

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             ++  Y  +G G E   LF  + +  + P+  +   VL   S  G
Sbjct: 247 NALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSG 292


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 223/719 (31%), Positives = 358/719 (49%), Gaps = 104/719 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL-GQQI 354
           ++V W    S   + G    A+  F   +   +  ++ T   A  A   ++  +L G  +
Sbjct: 116 DLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAV 175

Query: 355 HGTTLKSGFYSA-VIVGNSLINMYSKMGCVCGLR-------------------------- 387
            G   K GF+   V VG +LI+M++K G +  +R                          
Sbjct: 176 LGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGY 235

Query: 388 -----------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                             DQ+TL+S+L A + L     L +Q+H  A++    +DS VS 
Sbjct: 236 SDEAVELFLDMLENGFQPDQYTLSSMLSACTELGS-FRLGQQLHSLALRLGLESDSCVSC 294

Query: 431 ALIDVYCR--NG-SMAEAEYLFENKDGFDLATWNAMIFGYI-LSNNSHKALELFSHMHTS 486
            L+D+Y +  NG S+  A  +F      ++  W A++ GY+   +  ++ + LF  M   
Sbjct: 295 GLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNE 354

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G R + IT ++ +KAC  L     G+Q+H + +KS       V + ++ MY + G++ +A
Sbjct: 355 GIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEA 414

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSC 605
           +  F+ +   + V++    SG +D          Y   R+  G+    FTF  L+ A++ 
Sbjct: 415 RHAFDQLYEKNMVSF----SGNLDGDGRSNTYQDYQIERMELGI--STFTFGSLISAAAS 468

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           +  L +G+++HA  +K    SD  +G SLV MY++CG + DA  +F +M+  N + W +M
Sbjct: 469 VGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSM 528

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           + GLA+HG     L+LF DM A GV+P+ VT+I VLSACS+ GLV E  E+F +M++ +G
Sbjct: 529 ISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHG 588

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           + P +EHY+ +VD LGR+G  ++A + I  MP +  A + + LLGAC+   + + G+  A
Sbjct: 589 LIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAA 648

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
             ++ LEP D + YVLLSN++A A  WD V   R  M+ KN+ K+               
Sbjct: 649 NHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEF 708

Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAY 882
                    A+ I+ K+E LI+ IK  GYVPDT  VL D+ +E KE  L  HSEK+A A+
Sbjct: 709 RAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAF 768

Query: 883 GLIS----TPPSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           GLIS    T P  +                    + +E +   +NRFH ++DG C C +
Sbjct: 769 GLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGE 827



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 288/612 (47%), Gaps = 92/612 (15%)

Query: 68  DLLLGKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWN 123
           D+ LG++    +L +  +   D  + N+L+T+YS+C ++  AR +FD MP   RDL+SW 
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG-YVWASETVH 182
           ++ +  + +G   AE   E  RLF    E     +  TL    + C +S  +  A   V 
Sbjct: 122 AMASCLSRNG---AE--AEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVL 176

Query: 183 GYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           G   K+G  W  D  V  AL+++++K G +   + +FDG+ ER VV+W +++  YA++G+
Sbjct: 177 GLVFKLGF-WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGY 235

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLL--------- 290
            +E   LF+D+  +G  PD  ++  +L   ++LG  R  +Q+ + A++L L         
Sbjct: 236 SDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCG 295

Query: 291 --------YNNNS--------------NVVLWNKKLSGYLQVG--DNHGAIECFVNMIRS 326
                   +N  S              NV+ W   LSGY+Q G  DN   I  F  M+  
Sbjct: 296 LVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMI-LFCKMLNE 354

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
            ++ + +T+   L A A   + + G+QIH   +KS      +VGN+L++MY++ G +   
Sbjct: 355 GIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEA 414

Query: 387 RT--DQ------------------------------------FTLASVLRASSSLPEGLH 408
           R   DQ                                    FT  S++ A++S+   L 
Sbjct: 415 RHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGM-LT 473

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
             +++H  ++K    +D  +  +L+ +Y R G + +A  +F+  +  ++ +W +MI G  
Sbjct: 474 KGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLA 533

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELD 526
               + +ALELF  M  +G + +++T    + AC    ++K+GK+ H   M+   G    
Sbjct: 534 KHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPR 592

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLA-LSIYHQM 584
           +   + ++D+  + G + DA    N++P   D + W T++  C  +   D+  ++  H +
Sbjct: 593 MEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVI 652

Query: 585 RLSGVVPDEFTF 596
           +L    P  +  
Sbjct: 653 QLEPQDPAPYVL 664



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 217/464 (46%), Gaps = 62/464 (13%)

Query: 347 NLNLGQQIHGTTLKSG--FYSAVIVGNSLINMYSKMGCVCGLRT-------------DQF 391
           +++LG+ + G  L++G    +  +V NSL+ +YSK   V   R+                
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTV---------------------------- 423
            +AS L  + +  E L L  +     +  +                              
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 424 -----ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                 D  V  ALID++ +NG +     +F+      +  W  +I  Y  S  S +A+E
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M  +G + D+ T+++ + AC  L   + G+Q+H+ A++ G E D CVS G++DMY 
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 539 KC---GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI-YHQMRLSGVVPDEF 594
           K     ++ +A+ +FN +P  + +AWT ++SG V  G +D  + I + +M   G+ P+  
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T++ ++KA + L   + GRQIH + +K + +    VG +LV MYA+ G+IE+A   F Q+
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE--PDSVTFIGVLSACSYTGLVSE 712
             +N V ++  L       +G+     ++D +   +E    + TF  ++SA +  G++++
Sbjct: 422 YEKNMVSFSGNL-------DGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTK 474

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
             +  H +  K G   +    + LV    R G   +A ++   M
Sbjct: 475 G-QRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 129/257 (50%), Gaps = 12/257 (4%)

Query: 511 GKQMHAYAMKSG--FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA--PDDVAWTTMIS 566
           G+ +  + +++G   E D  V++ +L +Y KC A+  A+S+F+ +P    D V+WT M S
Sbjct: 66  GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA--SSCLTALEQGRQIHANLIKLD- 623
               NG E  AL ++ +    G++P+ FT     +A  +S L  L  G  +   + KL  
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGG-AVLGLVFKLGF 184

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             +D  VG +L+DM+AK G++     +F  +  R  V+W  ++   AQ G  +E ++LF 
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           DM  +G +PD  T   +LSAC+  G      +  H +  + G+E +      LVD   ++
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLG-QQLHSLALRLGLESDSCVSCGLVDMYAKS 303

Query: 744 GRTK---EAGELILSMP 757
              +    A E+   MP
Sbjct: 304 HNGQSLHNAREVFNRMP 320



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 15/234 (6%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S+L+   +  D   G+  H   + S+      + N L++MY+  GS+  AR  FD++ 
Sbjct: 363 YSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLY 422

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +++++S++  L      G+G + N  + +++ R      TFT       L+    S G +
Sbjct: 423 EKNMVSFSGNL-----DGDGRS-NTYQDYQIERMELGISTFT----FGSLISAAASVGML 472

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +H  +LK G   D  +  +LV++YS+ G + +A  +FD M + +V+ W  M+   
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGL 532

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAY 284
           A++G+      LF D+  +G+ P+D +   VL   S       GK H   +Q +
Sbjct: 533 AKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKH 586


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 214/708 (30%), Positives = 340/708 (48%), Gaps = 95/708 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  + GY + G    A+  +  M+   ++ D  TF   L    G  +L  G+++H   +
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222

Query: 360 KSGFYSAVIVGNSLINMYSKMG--------------------------------CVCGLR 387
           + GF S V V N+LI MY K G                                C+ GLR
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282

Query: 388 -----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                       D  T+ SV+ A  +L +   L +++H + IK   VA+  V+ +LI ++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDE-RLGREVHGYVIKTGFVAEVSVNNSLIQMH 341

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
              G   EAE +F   +  DL +W AMI GY  +    KA+E ++ M   G   DEITIA
Sbjct: 342 SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIA 401

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
           + + AC  L +L +G  +H +A ++G    + V++ ++DMY KC  +  A  +F+ IP  
Sbjct: 402 SVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + ++WT++I G   N     AL  + QM LS + P+  T   ++ A + + AL  G++IH
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIH 520

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           A+ ++     D F+  +L+DMY +CG +E A+  F   + ++   WN +L G AQ G G 
Sbjct: 521 AHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGG 579

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
             ++LF  M    V PD +TF  +L ACS +G+V++  E F  M  K+ I P ++HY+ +
Sbjct: 580 LAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV 639

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAGR ++A E I  MP +   ++  ALL ACR+  + E G+  A+ +  ++    
Sbjct: 640 VDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSV 699

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------D 833
             Y+LL N++A + +WD+V   R  M+   +  DP                         
Sbjct: 700 GYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIK 759

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            I A +EG  ++++  G     D    D++  + E     HSE+LA A+GLI+T P + I
Sbjct: 760 EINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAE-IFCGHSERLAIAFGLINTVPGTPI 818

Query: 894 LSNKEPLY------------------------ANRFHHLRDGMCPCAD 917
              K  LY                          +FHH +DG+C C D
Sbjct: 819 WVTKN-LYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 233/553 (42%), Gaps = 82/553 (14%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L++M+ R G LV A  +F KM +RDL SWN ++  YA +G  +     E   L+  
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFD-----EALNLYHR 185

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +          T   +L+ C     +     VH + ++ G   D  V  AL+ +Y K G 
Sbjct: 186 MLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGD 245

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           I  A+ +FD M  RD + W  M+  Y EN    E   LF  +    + PD  ++  V+  
Sbjct: 246 IFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA 305

Query: 270 ISDLG-KRHEEQVQAYAIKLLLYN----NNS------------------------NVVLW 300
              LG +R   +V  Y IK         NNS                        ++V W
Sbjct: 306 CEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSW 365

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +SGY + G    A+E +  M    V  D +T    L+A AG   L+ G  +H    +
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425

Query: 361 SGFYSAVIVGNSLINMYSKMGC-------------------------------------- 382
           +G  S VIV NSLI+MYSK  C                                      
Sbjct: 426 TGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFF 485

Query: 383 ----VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
               +  L+ +  TL SVL A + +   L   K+IH HA++     D F+  AL+D+Y R
Sbjct: 486 FQQMILSLKPNSVTLVSVLSACARIG-ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G M  A   F + +  D+A+WN ++ GY        A+ELF  M  S    DEIT  + 
Sbjct: 545 CGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
           + AC    M+  G + +  +M+  F +  +L   + ++D+  + G + DA      +P  
Sbjct: 604 LCACSRSGMVTDGLE-YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPID 662

Query: 556 PDDVAWTTMISGC 568
           PD   W  +++ C
Sbjct: 663 PDPAIWGALLNAC 675



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 184/359 (51%), Gaps = 1/359 (0%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H +  K  T     +  AL+ ++ R G + EA Y+F      DL +WN ++ GY  + 
Sbjct: 115 RVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG 174

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +AL L+  M   G R D  T    ++ CG L  L +G+++H + ++ GFE D+ V +
Sbjct: 175 YFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN 234

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MYVKCG +  A+ +F+ +P  D ++W  MISG  +N      L ++  MR   V P
Sbjct: 235 ALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDP 294

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D  T   ++ A   L     GR++H  +IK    ++  V  SL+ M++  G  ++A ++F
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVF 354

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M+ ++ V W AM+ G  ++G  E+ ++ +  M+  GV PD +T   VLSAC+  GL+ 
Sbjct: 355 SKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLD 414

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           +     H   ++ G+   V   + L+D   +     +A E+   +P +   S    +LG
Sbjct: 415 KGIM-LHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 35/352 (9%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR      DL  G+  H  ++      D  + N L+TMY +CG +  AR +FD+MP RD
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            ISWN++++ Y  +     +   EG RLF  +RE       +T+  ++  C + G     
Sbjct: 261 RISWNAMISGYFEN-----DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             VHGY +K G V +  V+ +L+ ++S  G   EA+ +F  M+ +D+V W  M+  Y +N
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHE-------------- 278
           G  E+    +  +   G+ PD+ ++  VL   + LG        HE              
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVA 435

Query: 279 -EQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              +  Y        A+++     N NV+ W   + G      +  A+  F  MI S ++
Sbjct: 436 NSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LK 494

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            +SVT +  L+A A    L+ G++IH   L++G      + N+L++MY + G
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 7/265 (2%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N++I    L  +  KAL     M      ++E T    ++ C       +G ++H+Y  K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           +   L + + + +L M+V+ G +V+A  +F  +   D  +W  ++ G    G  D AL++
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           YH+M   G+ PD +TF  +++    L  L +GR++H ++I+    SD  V  +L+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG+I  A ++F +M  R+ + WNAM+ G  ++    E L+LF  M+   V+PD +T   V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 701 LSACSYTGLVSEAYENFHLMREKYG 725
           +SAC       EA  +  L RE +G
Sbjct: 303 ISAC-------EALGDERLGREVHG 320



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 34/314 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    +  D  LG+  H  ++ +  + +  + N+L+ M+S  G    A  +F KM  +
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+SW ++++ Y  +G    E   E + +   +         +T+A +L  C   G +  
Sbjct: 361 DLVSWTAMISGYEKNGL--PEKAVETYTI---MEHEGVVPDEITIASVLSACAGLGLLDK 415

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H +A + GL     V+ +L+++YSK   I +A  +F  +  ++V+ W  ++     
Sbjct: 416 GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRL 475

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLL------ 290
           N    E    F  +  S L P+  ++  VL   + +G     +++ A+A++  L      
Sbjct: 476 NYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFL 534

Query: 291 --------------------YNN-NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                               +N+   +V  WN  L+GY Q G    A+E F  MI S+V 
Sbjct: 535 PNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594

Query: 330 YDSVTFLVALAAVA 343
            D +TF   L A +
Sbjct: 595 PDEITFTSLLCACS 608



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 8/202 (3%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           S   L F Q+   S   +S    S+L        L  GK  HA  L +    D FL N L
Sbjct: 479 SFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY RCG +  A   F+   ++D+ SWN +L  YA  G+G          LF  + ES 
Sbjct: 539 LDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGL-----AVELFHKMIESD 592

Query: 155 TFTSRLTLAPLLKLCLSSGYVWAS-ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                +T   LL  C  SG V    E       K  +  +     ++V++  + G++ +A
Sbjct: 593 VNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDA 652

Query: 214 KFLFDGMQ-ERDVVLWKVMLRA 234
                 M  + D  +W  +L A
Sbjct: 653 YEFIKKMPIDPDPAIWGALLNA 674


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/697 (30%), Positives = 330/697 (47%), Gaps = 91/697 (13%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQV-GDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           +A KL     + N   W   +SG+ +  G +      F  M       +  T    L   
Sbjct: 85  HAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCC 144

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           +  +N+  G+ IH   L++G    V++ NS++++Y        L+  +F  A       S
Sbjct: 145 SRENNIQFGKGIHAWILRNGVGGDVVLENSILDLY--------LKCKEFEYAE------S 190

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
             E +          I+ D V+ +     +I  Y R G + ++  +F N    D+ +WN 
Sbjct: 191 FFELM----------IEKDVVSWNI----MIGAYLREGDVEKSLEMFRNFPNKDVVSWNT 236

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           +I G I       ALE    M   G     +T + A+     L +++ G+Q+H   +  G
Sbjct: 237 IIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFG 296

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIP--------------APDD--VAWTTMIS 566
              D  + S +++MY KCG M  A +I  D+P               P    V+W++M+S
Sbjct: 297 LNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVS 356

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G V NG+ +  +  +  M    +V D  T A ++ A +    LE G+QIHA + K+    
Sbjct: 357 GYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRI 416

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
           D +VG SL+DMY+K G+++DA ++F+Q+   N VLW +M+ G A HG G+E + LFE M 
Sbjct: 417 DAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGML 476

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
             G+ P+ VTF+GVL+ACS+ GL+ E    F +M++ Y I PEVEHY+ +V+  GRAG  
Sbjct: 477 NLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHL 536

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
            EA   I         S+ R+ L +CR+  +   GK V+E L+   P D  AY+LLSN+ 
Sbjct: 537 IEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMC 596

Query: 807 AAANQWDDVTSARGEMKRKNVKKDPADL-----------------------IFAKVEGLI 843
           ++ +QWD+    R  M ++ VKK P                          I++ ++ LI
Sbjct: 597 SSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLI 656

Query: 844 KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN 903
            R+KE GY  D   V+ DVEEE+ E  + +HSEKLA  + +I+T P + I   K     N
Sbjct: 657 GRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICN 716

Query: 904 -----------------------RFHHLRDGMCPCAD 917
                                  RFHH +   C C +
Sbjct: 717 DCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGE 753



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 158/605 (26%), Positives = 276/605 (45%), Gaps = 100/605 (16%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K    +ILNS+        N L+T+Y +  +L +A +LFD++  ++  +W  +++ +A +
Sbjct: 60  KKGSLQILNSA--------NYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
             G++E V   F LFR ++      ++ TL+ +LK C     +   + +H + L+ G+  
Sbjct: 112 A-GSSELV---FSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGG 167

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  +  +++++Y K  +   A+  F+ M E+DVV W +M+ AY   G  E+   +F +  
Sbjct: 168 DVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF- 226

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                                                    N +VV WN  + G +Q G 
Sbjct: 227 ----------------------------------------PNKDVVSWNTIIDGLIQCGY 246

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A+E    M+    ++  VTF +AL  V+    + +G+Q+HG  L  G  S   + +S
Sbjct: 247 ERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSS 306

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           L+ MY K G     R D        +AS+ L +                 V  +F+    
Sbjct: 307 LVEMYGKCG-----RMD--------KASTILKD-----------------VPLNFLRKGN 336

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
             V C+                  + +W++M+ GY+ +      ++ F  M      +D 
Sbjct: 337 FGVTCKEPKAR-------------MVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDI 383

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T+AT + AC    +L+ GKQ+HAY  K G  +D  V S ++DMY K G++ DA  IF  
Sbjct: 384 RTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ 443

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           I  P+ V WT+MISGC  +G+   A+S++  M   G++P+E TF  ++ A S +  +E+G
Sbjct: 444 IKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEG 503

Query: 613 RQIHANLIKLDCSSDPFVG--ISLVDMYAKCGN-IEDAYILFKQMDMRNTVLWNAMLVGL 669
            + +  ++K     +P V    S+V++Y + G+ IE    +F+      T +W + L   
Sbjct: 504 CR-YFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSC 562

Query: 670 AQHGN 674
             H N
Sbjct: 563 RLHKN 567



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 199/448 (44%), Gaps = 55/448 (12%)

Query: 394 ASVLRASSSL--PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
            S L +++S+  P  L   + +H H  K  ++     +  L+ +Y ++ ++  A  LF+ 
Sbjct: 36  CSFLHSTTSIGSPPSL---RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDE 92

Query: 452 KDGFDLATWNAMIFGYI-LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
               +  TW  +I G+   + +S     LF  M   G   ++ T+++ +K C     ++ 
Sbjct: 93  ITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQF 152

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS---------------------- 548
           GK +HA+ +++G   D+ + + ILD+Y+KC     A+S                      
Sbjct: 153 GKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLR 212

Query: 549 ---------IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
                    +F + P  D V+W T+I G +  G E LAL   + M   G      TF+I 
Sbjct: 213 EGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIA 272

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-- 657
           +   S L+ +E GRQ+H  ++    +SD ++  SLV+MY KCG ++ A  + K + +   
Sbjct: 273 LILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFL 332

Query: 658 --------------NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
                           V W++M+ G   +G  E+ +K F  M    +  D  T   ++SA
Sbjct: 333 RKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISA 392

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           C+  G++ E  +  H   +K G+  +    S L+D   ++G   +A  +I     E +  
Sbjct: 393 CANAGIL-EFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDA-LMIFEQIKEPNVV 450

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMAL 791
           +  +++  C + G  +    + E ++ L
Sbjct: 451 LWTSMISGCALHGQGKEAISLFEGMLNL 478



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 155/323 (47%), Gaps = 26/323 (8%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD--- 112
           FSI    +S+  L+ +G+  H R+L      D ++ ++L+ MY +CG +  A  +     
Sbjct: 269 FSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP 328

Query: 113 -------------KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
                        K P   ++SW+S+++ Y  +G+       +G + FRS+   +     
Sbjct: 329 LNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGK-----YEDGMKTFRSMVCELIVVDI 383

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T+A ++  C ++G +   + +H Y  KIGL  D +V  +L+++YSK G + +A  +F+ 
Sbjct: 384 RTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ 443

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           ++E +VVLW  M+   A +G G+E   LF  +   G+ P++ +   VL   S +G   EE
Sbjct: 444 IKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLI-EE 502

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
             + + +    Y+ N  V  +   ++ Y + G     IE    +  +++ + +  +   L
Sbjct: 503 GCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGH---LIEAKNFIFENSISHFTSVWRSFL 559

Query: 340 AAVAGTDNLNLGQQIHGTTLKSG 362
           ++     N N+G+ +    L+S 
Sbjct: 560 SSCRLHKNFNMGKSVSEMLLQSA 582



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 160/400 (40%), Gaps = 80/400 (20%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+     +++  GK  HA IL +    D  L N+++ +Y +C    YA   F+ M ++
Sbjct: 139 SVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEK 198

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-----------RLTLAPL- 165
           D++SWN ++ AY    EG+ E   E FR F + ++ +++ +           RL L  L 
Sbjct: 199 DVVSWNIMIGAYLR--EGDVEKSLEMFRNFPN-KDVVSWNTIIDGLIQCGYERLALEQLY 255

Query: 166 -----------------LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
                            L L  S   V     +HG  L  GL  D ++  +LV +Y K G
Sbjct: 256 CMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCG 315

Query: 209 KIREA---------KFLFDG-------MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           ++ +A          FL  G         +  +V W  M+  Y  NG  E+    F  + 
Sbjct: 316 RMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMV 375

Query: 253 RSGLCPDDESVQCVLGV-----ISDLGKRHEEQVQAYAIKLLLYNNNS------------ 295
              +  D  +V  ++       I + GK+    +Q   +++  Y  +S            
Sbjct: 376 CELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLD 435

Query: 296 ------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                       NVVLW   +SG    G    AI  F  M+   +  + VTF+  L A +
Sbjct: 436 DALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACS 495

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGN--SLINMYSKMG 381
               +  G + +   +K  ++    V +  S++N+Y + G
Sbjct: 496 HVGLIEEGCR-YFRMMKDTYHINPEVEHYTSMVNLYGRAG 534


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 215/709 (30%), Positives = 346/709 (48%), Gaps = 92/709 (12%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           VL++  L GY +      A+  F+ M+   V+     +   L       +L  G++IHG 
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCV---------------------------------- 383
            + +GF S + V  +++++Y+K   +                                  
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230

Query: 384 ---------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G + D  TL S+L A + + + L + + IH +A ++   +   V+ AL+D
Sbjct: 231 LQLVLQMQEAGQKPDSVTLVSILPAVADM-KALRIGRSIHGYAFRSGFESLVNVTNALLD 289

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS   A  +F+      + +WN MI G   +  S +A   F  M   GE    +T
Sbjct: 290 MYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVT 349

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +   + AC  L  L++G  +H    K   + ++ V + ++ MY KC  +  A SIFN++ 
Sbjct: 350 MMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE 409

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             + V W  MI G   NG    AL+++  M+  G+  D FT   ++ A +  +   Q + 
Sbjct: 410 KTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKW 468

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           IH   ++    ++ FV  +LVDMYAKCG I+ A  LF  M  R+ + WNAM+ G   HG 
Sbjct: 469 IHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGV 528

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G+ETL LF +M+   V+P+ +TF+ V+SACS++G V E    F  M+E Y +EP ++HYS
Sbjct: 529 GKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYS 588

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD LGRAG+  +A   I  MP +   S+  A+LGAC++  + E G+  A+KL  L+P 
Sbjct: 589 AMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPD 648

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------------- 831
           +   +VLL+NI+A+ + WD V   R  M+ K + K P                       
Sbjct: 649 EGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPE 708

Query: 832 ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
           +  I+A +E L   IK  GYVPD D +  DVEE+ K++ L  HSE+LA A+GL++T P +
Sbjct: 709 SKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGT 767

Query: 892 V---------------------ILSNKEPLYAN--RFHHLRDGMCPCAD 917
                                 +++ +E +  +  RFHH ++G C C D
Sbjct: 768 TLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGD 816



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 169/341 (49%), Gaps = 1/341 (0%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           QI    IKN    +    T +I ++C+ GS +EA  +FE+ +      ++ M+ GY  ++
Sbjct: 65  QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           +   AL  F  M     RL     A  ++ CG  L LK+G+++H   + +GFE +L V +
Sbjct: 125 SLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMT 184

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ +Y KC  + +A  +F  +   D V+WTT+++G   NG    AL +  QM+ +G  P
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKP 244

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D  T   ++ A + + AL  GR IH    +    S   V  +L+DMY KCG+   A ++F
Sbjct: 245 DSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVF 304

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           K M  +  V WN M+ G AQ+G  EE    F  M   G  P  VT +GVL AC+  G + 
Sbjct: 305 KGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLE 364

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
             +   H + +K  ++  V   + L+    +  R   A  +
Sbjct: 365 RGW-FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASI 404



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 143/599 (23%), Positives = 255/599 (42%), Gaps = 89/599 (14%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I+ +    +      +++++ + GS   A R+F+ +  +  + ++ +L  YA       +
Sbjct: 70  IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYA-------K 122

Query: 139 NVTEGFRLFRSLRESITFTSRLTL---APLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
           N + G  L   LR  +    RL +   A LL+LC  +  +     +HG  +  G   + F
Sbjct: 123 NSSLGDALCFFLR-MMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLF 181

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           V  A++++Y+K  +I  A  +F+ MQ +D+V W  ++  YA+NG  +    L + +  +G
Sbjct: 182 VMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAG 241

Query: 256 LCPDDESVQCVLGVISDLGK-RHEEQVQAYA--------------------------IKL 288
             PD  ++  +L  ++D+   R    +  YA                          I  
Sbjct: 242 QKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIAR 301

Query: 289 LLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           L++    +  VV WN  + G  Q G++  A   F+ M+        VT +  L A A   
Sbjct: 302 LVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLG 361

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-------------------------- 380
           +L  G  +H    K    S V V NSLI+MYSK                           
Sbjct: 362 DLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILG 421

Query: 381 ----GCV-------C-----GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
               GCV       C     G++ D FTL  V+ A +        +K IH  A++     
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQ-AKWIHGLAVRACMDN 480

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           + FVSTAL+D+Y + G++  A  LF+      + TWNAMI GY       + L+LF+ M 
Sbjct: 481 NVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQ 540

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGA 542
               + ++IT  + + AC     +++G  +   +M+  + L+  +   S ++D+  + G 
Sbjct: 541 KGAVKPNDITFLSVISACSHSGFVEEGLLLFK-SMQEDYYLEPTMDHYSAMVDLLGRAGQ 599

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           + DA +   ++P  P       M+  C     +++ L      +L  + PDE  + +L+
Sbjct: 600 LDDAWNFIQEMPIKPGISVLGAMLGAC--KIHKNVELGEKAAQKLFKLDPDEGGYHVLL 656



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 176/407 (43%), Gaps = 59/407 (14%)

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            ++SH H S   L+  T              K+  Q+  + +K+GF  +    + ++ ++
Sbjct: 42  RVYSHRHPSVVLLENCTSK------------KELYQILPFIIKNGFYNEHLFQTKVISLF 89

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            K G+  +A  +F  +    DV +  M+ G   N     AL  + +M    V      +A
Sbjct: 90  CKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYA 149

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            L++       L++GR+IH  +I     S+ FV  +++ +YAKC  I++AY +F++M  +
Sbjct: 150 CLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHK 209

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS------------ 705
           + V W  ++ G AQ+G+ +  L+L   M+  G +PDSVT + +L A +            
Sbjct: 210 DLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIH 269

Query: 706 -------YTGLVSE----------------AYENFHLMREKYGIEPEVEHYSFLVDALGR 742
                  +  LV+                 A   F  MR K      V  ++ ++D   +
Sbjct: 270 GYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSK-----TVVSWNTMIDGCAQ 324

Query: 743 AGRTKEAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWVAEKLMALEPFDSSAY 799
            G ++EA    L M  E        ++G   AC   GD E G W   KL+     DS+  
Sbjct: 325 NGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG-WFVHKLLDKLKLDSNVS 383

Query: 800 VL--LSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIK 844
           V+  L ++++   + D   S    +++ NV  +   L +A+  G +K
Sbjct: 384 VMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQ-NGCVK 429


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 218/717 (30%), Positives = 341/717 (47%), Gaps = 99/717 (13%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG------ 351
           V W+  + G+ +VGD       F  +IR   + D+ T    + A     NL +       
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYV 204

Query: 352 -----------------QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
                            + +   T+  G Y+     N  + ++ KM    G+  D+  + 
Sbjct: 205 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE-GVVPDKVAMV 263

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           +V+ A + L   +H ++ I  +  +     D  + TA+ID+Y + G +  A  +F+  + 
Sbjct: 264 TVVFACAKLG-AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE 322

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            ++ +W+AMI  Y       KAL+LF  M +SG   D+IT+A+ + AC     L Q +Q+
Sbjct: 323 KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQV 382

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG------- 567
           HA A   G   +L V++ ++  Y    A+ DA  +F+ +   D V+W+ M+ G       
Sbjct: 383 HAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 442

Query: 568 --CV-------------DN------GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
             C              DN      G  + +L ++ +MR  GVVPD+     +V A + L
Sbjct: 443 MNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 502

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A+ + R I   + +     D  +G +++DM+AKCG +E A  +F +M+ +N + W+AM+
Sbjct: 503 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 562

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
                HG G + L LF  M   G+ P+ +T + +L ACS+ GLV E    F LM E Y +
Sbjct: 563 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSV 622

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
             +V+HY+ +VD LGRAGR  EA +LI SM  E    +  A LGACR   D    +  A 
Sbjct: 623 RADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAAT 682

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
            L+ L+P +   Y+LLSNI+A A +W+DV   R  M ++ +KK P               
Sbjct: 683 SLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFS 742

Query: 832 --------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                   +  I+  ++ L  +++  GYVPDT+FVL DV+EE K   LY HSEKLA A+G
Sbjct: 743 VGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFG 802

Query: 884 LISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           LI+TP  + I   K                           ANRFHH ++G C C D
Sbjct: 803 LIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGD 859



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 242/575 (42%), Gaps = 82/575 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           VH  A   G++ +  V+  L+  YS +  + +A  LFDGM  RD V W VM+  +A+ G 
Sbjct: 100 VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 159

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY--------AIKLLLYN 292
               F  F +L R G  PD+ ++  V+    DL       V  Y        A  L    
Sbjct: 160 YINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKM 219

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              ++V W   + GY + G  + ++  F  M    V  D V  +  + A A    ++  +
Sbjct: 220 QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 279

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------------- 383
            I     +  F   VI+G ++I+MY+K GCV                             
Sbjct: 280 IIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 339

Query: 384 --------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
                          G+  D+ TLAS+L A  +    L   +Q+H  A  +  + +  V+
Sbjct: 340 QGRKALDLFRMMLSSGMLPDKITLASLLYACINC-RNLTQVRQVHAQASVHGMLQNLIVA 398

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI--------------------- 468
             L+  Y    ++ +A  LF+     D  +W+ M+ G+                      
Sbjct: 399 NKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 458

Query: 469 -------LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
                     N++++L LF  M   G   D++ + T V AC  L  + + + +  Y  + 
Sbjct: 459 PDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK 518

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
            F+LD+ + + ++DM+ KCG +  A+ IF+ +   + ++W+ MI+    +G+   AL ++
Sbjct: 519 KFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 578

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMYAK 640
             M  SG++P++ T   L+ A S    +E+G +  + + +     +D      +VD+  +
Sbjct: 579 PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGR 638

Query: 641 CGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN 674
            G +++A  L + M + ++  LW A L     H +
Sbjct: 639 AGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 21/294 (7%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H  A  +  + +  V+  LI  Y    ++ +A  LF+     D  +W+ M+ G+   
Sbjct: 98  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +       F  +   G R D  T+   ++AC  L  L+                     
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM-------------------- 197

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMYVKC  + DA+ +F+ +   D V WT MI G  + G+ + +L ++ +MR  GVV
Sbjct: 198 -ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+     +V A + L A+ + R I   + +     D  +G +++DMYAKCG +E A  +
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           F +M+ +N + W+AM+     HG G + L LF  M + G+ PD +T   +L AC
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 235/491 (47%), Gaps = 37/491 (7%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+ MY +C  +  AR LFDKM +RDL++W  ++  YA  G+ N     E   LF  +RE 
Sbjct: 199 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN-----ESLVLFEKMREE 253

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                ++ +  ++  C   G +  +  +  Y  +     D  +  A++++Y+K G +  A
Sbjct: 254 GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 313

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           + +FD M+E++V+ W  M+ AY  +G G +   LF  +  SG+ PD  ++  +L   + +
Sbjct: 314 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL--YACI 371

Query: 274 GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL---SGYLQVGDNHGAIECFVNMIRSNVQY 330
             R+  QV+    +  ++    N+++ NK +   S Y  + D +G  +     +R     
Sbjct: 372 NCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMC--VR----- 424

Query: 331 DSVTFLVALAAVAGT-DNLNL---GQQIHGTTLKSGFYSAVIVGN---SLINMYSKMGCV 383
           DSV++ V +   A   D +N     +++     +   Y+    GN   SL+ ++ KM   
Sbjct: 425 DSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLV-LFDKMR-E 482

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            G+  D+  + +V+ A + L   +H ++ I  +  +     D  + TA+ID++ + G + 
Sbjct: 483 EGVVPDKVAMVTVVFACAKLG-AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 541

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A  +F+  +  ++ +W+AMI  Y       KAL+LF  M  SG   ++IT+ + + AC 
Sbjct: 542 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 601

Query: 504 CLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PD 557
              ++++G +  +     Y++++  +   CV    +D+  + G + +A  +   +    D
Sbjct: 602 HAGLVEEGLRFFSLMWEDYSVRADVKHYTCV----VDLLGRAGRLDEALKLIESMTVEKD 657

Query: 558 DVAWTTMISGC 568
           +  W   +  C
Sbjct: 658 EGLWGAFLGAC 668



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 54/318 (16%)

Query: 71  LGKSTHARILNSSQIPDRF-----LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           LG    ARI++      +F     L   ++ MY++CG +  AR +FD+M ++++ISW+++
Sbjct: 272 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 331

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +AAY + G+G      +   LFR +  S     ++TLA LL  C++   +     VH  A
Sbjct: 332 IAAYGYHGQGR-----KALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQA 386

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
              G++ +  V+  LV+ YS +  + +A  LFDGM  RD V W VM+  +A+ G     F
Sbjct: 387 SVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCF 446

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
             F +L R G  PD+ ++                            N N ++VL++K   
Sbjct: 447 GTFRELIRCGARPDNYTLP------------------------FCGNANESLVLFDK--- 479

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
                            M    V  D V  +  + A A    ++  + I     +  F  
Sbjct: 480 -----------------MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 522

Query: 366 AVIVGNSLINMYSKMGCV 383
            VI+G ++I+M++K GCV
Sbjct: 523 DVILGTAMIDMHAKCGCV 540



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 24/250 (9%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L Q +Q+HA A   G   ++ V++ ++  Y    A+ DA  +F+ +   D V+W+ M+ G
Sbjct: 94  LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 153

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G+       + ++   G  PD +T   +++A   L  L+                 
Sbjct: 154 FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ----------------- 196

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
               ++LVDMY KC  IEDA  LF +M  R+ V W  M+ G A+ G   E+L LFE M+ 
Sbjct: 197 ----MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 252

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            GV PD V  + V+ AC+  G + +A   + ++ R+K+ +  +V   + ++D   + G  
Sbjct: 253 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCV 310

Query: 747 KEAGELILSM 756
           + A E+   M
Sbjct: 311 ESAREIFDRM 320



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 23/240 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   I+  +L   +  HA+      + +  + N L+  YS   +L  A  LFD M  R
Sbjct: 365 SLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVR 424

Query: 118 DLISWNSILAAYAHSGE---------------GNAENVT--------EGFRLFRSLRESI 154
           D +SW+ ++  +A  G+                  +N T        E   LF  +RE  
Sbjct: 425 DSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEG 484

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
               ++ +  ++  C   G +  + T+  Y  +     D  +  A++++++K G +  A+
Sbjct: 485 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 544

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M+E++V+ W  M+ AY  +G G +   LF  + RSG+ P+  ++  +L   S  G
Sbjct: 545 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 604



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 19/156 (12%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D  L   ++ M+++CG +  AR +FD+M ++++ISW++++AAY + G+G      +   L
Sbjct: 523 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR-----KALDL 577

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA------- 199
           F  +  S    +++TL  LL  C  +G V   E +  ++    L+W+++   A       
Sbjct: 578 FPMMLRSGILPNKITLVSLLYACSHAGLV--EEGLRFFS----LMWEDYSVRADVKHYTC 631

Query: 200 LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           +V++  + G++ EA  L + M  E+D  LW   L A
Sbjct: 632 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 299/581 (51%), Gaps = 83/581 (14%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G    ++T+ S+L AS+ L + L   KQIH   I  + + + F+  AL D+Y + G + +
Sbjct: 150 GFEPTEYTIVSILNASAQLSD-LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQ 208

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A +LF+     +L +WN MI GY  +    K + L   M  SG   D++T++T + A   
Sbjct: 209 ARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--- 265

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
                                           Y +CG + +A+ +F++    D V WT M
Sbjct: 266 --------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAM 293

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           + G   NG E+ AL ++++M L  + PD +T + +V + + L +L  G+ +H   I    
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           +++  V  +L+DMY+KCG I+DA  +F  M  RN V WNAM+VG AQ+G+ ++ L+LFE+
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M     +PD+VTFIG+LSAC +   + +  E F  +  ++G+ P ++HY+ +V+ LGR G
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R ++A  LI +M  +    +   LL  C  +GD    +  A  L  L+P  +  Y++LSN
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533

Query: 805 IFAAANQWDDVTSARGEMKRKNVKK-----------------------DPADLIFAKVEG 841
           ++A+  +W DV S R  MK KNVKK                         ++ I+ K+  
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP------------ 889
           LI +++E G+ P+T+ VL DV E+EK +++ +HSEKLA A+GLI  P             
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653

Query: 890 -----------SSVILSNKEPLY-ANRFHHLRDGMCPCADN 918
                      +S I+  +  L  +NRFHH   G C C DN
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDN 694



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 36/355 (10%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D F   AL+  Y ++GS+   +  F+     D  ++N  I G+  ++   ++LELF  M 
Sbjct: 88  DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G    E TI + + A   L  L+ GKQ+H   +   F  ++ + + + DMY KCG + 
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A+ +F+ +   + V+W  MISG   NG+ +  + + HQMRLSG +PD+ T + ++ A  
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
                                            Y +CG +++A  +F +   ++ V W A
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTA 292

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           M+VG A++G  E+ L LF +M    +EPDS T   V+S+C+    +    +  H      
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-QAVHGKSILA 351

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           G+   +   S L+D   + G   +A  +   MP     S +  ++G  +   D +
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKD 406



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 180/367 (49%), Gaps = 33/367 (8%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYA 107
           S+++S  +  ++   + T+++   K   + + +   Q  D FL N L+ +Y++ G L  A
Sbjct: 18  STATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDA 77

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSG---------------EGNAENVT----------- 141
           + LFDKM  RD+ SWN++L+AYA SG               +  + N T           
Sbjct: 78  QNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ 137

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E   LF+ ++      +  T+  +L        +   + +HG  +    + + F+  AL 
Sbjct: 138 ESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALT 197

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y+K G+I +A++LFD + ++++V W +M+  YA+NG  E+   L   +  SG  PD  
Sbjct: 198 DMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQV 257

Query: 262 SVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
           ++  ++      G+  E      A ++       ++V W   + GY + G    A+  F 
Sbjct: 258 TMSTIIAAYCQCGRVDE------ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFN 311

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M+  +++ DS T    +++ A   +L+ GQ +HG ++ +G  + ++V ++LI+MYSK G
Sbjct: 312 EMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCG 371

Query: 382 CVCGLRT 388
            +   R+
Sbjct: 372 FIDDARS 378



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 37/284 (13%)

Query: 508 LKQGKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGAMVDAQSIFND-------------- 552
           + Q K++ ++     F+  D  + + +L +Y K G + DAQ++F+               
Sbjct: 38  INQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLS 97

Query: 553 -----------------IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
                            +P  D V++ T I+G   N     +L ++ +M+  G  P E+T
Sbjct: 98  AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYT 157

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
              ++ AS+ L+ L  G+QIH ++I  +   + F+  +L DMYAKCG IE A  LF  + 
Sbjct: 158 IVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLT 217

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            +N V WN M+ G A++G  E+ + L   M+  G  PD VT   +++A    G V EA  
Sbjct: 218 KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARR 277

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            F   +EK     ++  ++ ++    + GR ++A  L   M  E
Sbjct: 278 VFSEFKEK-----DIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 155/373 (41%), Gaps = 78/373 (20%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P  SL L   +Q+  F  +  +    SIL  +   SDL  GK  H  I+  + + + F+ 
Sbjct: 136 PQESLELFKRMQREGFEPTEYTI--VSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIW 193

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L  MY++CG +  AR LFD +  ++L+SWN +++ YA +G+       +   L   +R
Sbjct: 194 NALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE-----KCIGLLHQMR 248

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
            S                                   G + D+     ++  Y + G++ 
Sbjct: 249 LS-----------------------------------GHMPDQVTMSTIIAAYCQCGRVD 273

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +F   +E+D+V W  M+  YA+NG  E+   LF ++    + PD  ++  V+   +
Sbjct: 274 EARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCA 333

Query: 272 DLGKRHEEQ-VQAYAIKLLLYNN----------------------------NSNVVLWNK 302
            L   H  Q V   +I   L NN                              NVV WN 
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------H 355
            + G  Q G +  A+E F NM++   + D+VTF+  L+A    + +  GQ+        H
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQH 453

Query: 356 GTTLKSGFYSAVI 368
           G T     Y+ ++
Sbjct: 454 GMTPTLDHYACMV 466



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHAN 618
           A+T ++  CV   E + A  +   M      P D F    L+   +    L   + +   
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++K     D F   +L+  YAK G+I++    F +M  R++V +N  + G + +   +E+
Sbjct: 84  MLK----RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSA 703
           L+LF+ M+  G EP   T + +L+A
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNA 164


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 221/712 (31%), Positives = 332/712 (46%), Gaps = 95/712 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+  WN  + GY + G    A++ +  M+   V+ D  TF   L    G  NL  G++IH
Sbjct: 171 NLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIH 230

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG--------------------------------CV 383
              ++ GF S V V N+LI MY K G                                C+
Sbjct: 231 VHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCL 290

Query: 384 CGLR-----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
            GLR            D  T+ SV+ A   L +   L +QIH + ++ +   D  +  +L
Sbjct: 291 EGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD-RLGRQIHGYVLRTEFGRDPSIHNSL 349

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I +Y   G + EAE +F   +  DL +W AMI GY       KALE +  M   G   DE
Sbjct: 350 IPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDE 409

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           ITIA  + AC CL  L  G  +H  A + G      V++ ++DMY KC  +  A  IF+ 
Sbjct: 410 ITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHS 469

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
               + V+WT++I G   N     AL  + +M +  + P+  T   ++ A + + AL  G
Sbjct: 470 TLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCG 528

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           ++IHA+ ++   S D F+  +++DMY +CG +E A+  F  +D   T  WN +L G A+ 
Sbjct: 529 KEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHEVTS-WNILLTGYAER 587

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G G    +LF+ M    V P+ VTFI +L ACS +G+V+E  E F+ M+ KY I P ++H
Sbjct: 588 GKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKH 647

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD LGR+G+ +EA E I  MP +   ++  ALL +CR+    E G+  AE +   +
Sbjct: 648 YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDD 707

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
                 Y+LLSN++A   +WD V   R  M++  +  DP                     
Sbjct: 708 TTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFH 767

Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
                I A +E   K++KE G V   +   +D+ E  K      HSE+LA  +GLI++ P
Sbjct: 768 PQIKEINALLERFYKKMKEAG-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGP 826

Query: 890 SSVILSNKEPLY------------------------ANRFHHLRDGMCPCAD 917
              I   K  LY                        A +FHH + G+C C D
Sbjct: 827 GMPIWVTKN-LYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 260/579 (44%), Gaps = 84/579 (14%)

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           +  AL++++ +FG + +A ++F  M++R++  W V++  YA+ G  +E   L+  +   G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202

Query: 256 LCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKL------------------------ 288
           + PD  +  CVL   G + +L +  E  V                               
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262

Query: 289 LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           L+++   N + + WN  +SGY + G     +  F  MI+  V  D +T    + A     
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-----------C----------- 384
           +  LG+QIHG  L++ F     + NSLI MYS +G +           C           
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382

Query: 385 ---------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                                G+  D+ T+A VL A S L   L +   +H  A +   V
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLC-NLDMGMNLHEVAKQKGLV 441

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           + S V+ +LID+Y +   + +A  +F +    ++ +W ++I G  ++N   +AL  F  M
Sbjct: 442 SYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM 501

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
                + + +T+   + AC  +  L  GK++HA+A+++G   D  + + ILDMYV+CG M
Sbjct: 502 -IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRM 560

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A   F  +   +  +W  +++G  + G+   A  ++ +M  S V P+E TF  ++ A 
Sbjct: 561 EYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCAC 619

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTV 660
           S    + +G + + N +K   S  P +     +VD+  + G +E+AY   ++M M+ +  
Sbjct: 620 SRSGMVAEGLE-YFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPA 678

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           +W A+L     H + E       ++ A  +  D  T +G
Sbjct: 679 VWGALLNSCRIHHHVE-----LGELAAENIFQDDTTSVG 712



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 154/278 (55%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  AL+ ++ R G++ +A Y+F   +  +L +WN ++ GY  +    +AL+L+  M   G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + D  T    ++ CG +  L +G+++H + ++ GFE D+ V + ++ MYVKCG +  A+
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +P  D ++W  MISG  +NG     L ++  M    V PD  T   ++ A   L 
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
               GRQIH  +++ +   DP +  SL+ MY+  G IE+A  +F + + R+ V W AM+ 
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           G       ++ L+ ++ M+A G+ PD +T   VLSACS
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACS 420



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 230/553 (41%), Gaps = 82/553 (14%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L++M+ R G+LV A  +F +M  R+L SWN ++  YA +G  +     E   L+  
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFD-----EALDLYHR 197

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +          T   +L+ C     +     +H + ++ G   D  V  AL+ +Y K G 
Sbjct: 198 MLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGD 257

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           +  A+ +FD M  RD + W  M+  Y ENG   E   LF  + +  + PD  ++  V+  
Sbjct: 258 VNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITA 317

Query: 270 ISDLG-KRHEEQVQAYAIKLLLYNNNS----------------------------NVVLW 300
              LG  R   Q+  Y ++     + S                            ++V W
Sbjct: 318 CELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSW 377

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +SGY        A+E +  M    +  D +T  + L+A +   NL++G  +H    +
Sbjct: 378 TAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQ 437

Query: 361 SGFYSAVIVGNSLINMYSKMGC----------------------VCGLRTDQ-------- 390
            G  S  IV NSLI+MY+K  C                      + GLR +         
Sbjct: 438 KGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFF 497

Query: 391 ------------FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                        TL  VL A + +   L   K+IH HA++     D F+  A++D+Y R
Sbjct: 498 FREMIRRLKPNSVTLVCVLSACARI-GALTCGKEIHAHALRTGVSFDGFMPNAILDMYVR 556

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G M  A   F + D  ++ +WN ++ GY        A ELF  M  S    +E+T  + 
Sbjct: 557 CGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISI 615

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIP-A 555
           + AC    M+ +G + +  +MK  + +  +L   + ++D+  + G + +A      +P  
Sbjct: 616 LCACSRSGMVAEGLE-YFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMK 674

Query: 556 PDDVAWTTMISGC 568
           PD   W  +++ C
Sbjct: 675 PDPAVWGALLNSC 687



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 151/290 (52%), Gaps = 3/290 (1%)

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N+ I+   L  N  +A+     MH     +++      ++ C      K+G ++++Y   
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
           S   L L + + +L M+V+ G +VDA  +F  +   +  +W  ++ G    G  D AL +
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           YH+M   GV PD +TF  +++    +  L +GR+IH ++I+    SD  V  +L+ MY K
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG++  A ++F +M  R+ + WNAM+ G  ++G   E L+LF  M  + V+PD +T   V
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314

Query: 701 LSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           ++AC   G      + + +++R ++G +P +  ++ L+      G  +EA
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEA 362



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 243/590 (41%), Gaps = 91/590 (15%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR      +L+ G+  H  ++      D  + N L+TMY +CG +  AR +FDKMP+RD
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRD 272

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            ISWN++++ Y  +G        EG RLF  + +       +T+  ++  C   G     
Sbjct: 273 RISWNAMISGYFENGV-----CLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLG 327

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +HGY L+     D  +  +L+ +YS  G I EA+ +F   + RD+V W  M+  Y   
Sbjct: 328 RQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENC 387

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR-HEEQVQAYAIKLLLYN 292
              ++    +  +   G+ PD+ ++  VL   S     D+G   HE   Q   +   +  
Sbjct: 388 LMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVA 447

Query: 293 NN-----------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
           N+                        N+V W   + G         A+  F  MIR  ++
Sbjct: 448 NSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-RLK 506

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
            +SVT +  L+A A    L  G++IH   L++G      + N++++MY + G +      
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQ 566

Query: 390 QFTLAS-------VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
            F++         +L   +   +G H + ++    ++++   +     +++    R+G +
Sbjct: 567 FFSVDHEVTSWNILLTGYAERGKGAH-ATELFQRMVESNVSPNEVTFISILCACSRSGMV 625

Query: 443 AEAEYLFENKDGFDLATWNAMIFGY-ILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           AE            L  +N+M + Y I+ N  H                          A
Sbjct: 626 AEG-----------LEYFNSMKYKYSIMPNLKH-------------------------YA 649

Query: 502 CGCLLMLKQGKQMHAYAM--KSGFELDLCVSSGILD-----MYVKCGAMVDAQSIFNDIP 554
           C   L+ + GK   AY    K   + D  V   +L+      +V+ G +  A++IF D  
Sbjct: 650 CVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELA-AENIFQD-- 706

Query: 555 APDDVAWTTMISGC-VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
               V +  ++S    DNG+ D    +   MR +G++ D     + VK +
Sbjct: 707 DTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGT 756


>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
 gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
          Length = 691

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 210/687 (30%), Positives = 336/687 (48%), Gaps = 66/687 (9%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           ++ H + +K G   + +++  LV++Y+ F  + +A  LFD M  +++V W  M+ AY  N
Sbjct: 23  KSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTMVSAYTSN 82

Query: 239 GFGEEVFHLFVD-LHRSGLCPDDESVQCVLGVISDLG---------KRHEEQVQAYAIKL 288
           G   E   L+   L      P+      VL     +G         KR   +   Y I L
Sbjct: 83  GKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFSRENLDYDIVL 142

Query: 289 L-----LYNN----------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           L     +Y                   +N   WN  +SGY + G    A+  F  M   N
Sbjct: 143 LNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQMPDRN 202

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V   + T +  LA    +  L    ++H                             G++
Sbjct: 203 VVSWN-TIIAGLAENGSSRALQFVCKMHRE---------------------------GIK 234

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D+FT    L+ + S    L   KQIH + +K+   +  F  +AL+D+Y     + +A  
Sbjct: 235 LDKFTFPCALK-TCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIR 293

Query: 448 LFENKDGF------DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           LF+   G        L  WN+M+ GY++   +  A+ + + +H SG  +D  T+++A+K 
Sbjct: 294 LFDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKV 353

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  LL ++ G Q+HA  + SG ELD  V S ++D+Y K G M DA  +F+ +P  D VAW
Sbjct: 354 CINLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAW 413

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           + ++ GC       LALS++  M   GV  D++  + ++K  S L ++  G+Q+HA  IK
Sbjct: 414 SGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIK 473

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               ++     +L+DMY+KCG +ED  +LF  +  R+ V W  ++VG AQ+G   E L++
Sbjct: 474 RGYETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEI 533

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M   G++P+ VT++GVL+AC + GLV EA   F  M+  + +EP++EHY  +VD L 
Sbjct: 534 FRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLC 593

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           +AG  KE  +LI  MPF+   ++  ++LGAC    +T     +AE L+A  P D S YV+
Sbjct: 594 QAGYFKEVEKLIAEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVM 653

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVK 828
           LSN +     WD ++  R   K+  VK
Sbjct: 654 LSNAYGTLGMWDSLSQVREAAKKLGVK 680



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 152/677 (22%), Positives = 273/677 (40%), Gaps = 123/677 (18%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           +RH      L  GKS H+ ++ +    + ++  NL++MY+    L+ A +LFD+MP +++
Sbjct: 10  IRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNI 69

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++W ++++AY  +G+       E  +L+ R L       +    + +LK C   G +   
Sbjct: 70  VTWTTMVSAYTSNGKPR-----EAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELG 124

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-------------------- 218
             +H    +  L +D  +  AL+++Y K G + +A+ +FD                    
Sbjct: 125 RLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFK 184

Query: 219 ------------GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
                        M +R+VV W  ++   AENG           +HR G+  D  +  C 
Sbjct: 185 EGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENG-SSRALQFVCKMHREGIKLDKFTFPCA 243

Query: 267 LGVISDLG-KRHEEQVQAYAIK-------------LLLYNNNS----------------- 295
           L   S  G     +Q+  Y +K             + +Y+N +                 
Sbjct: 244 LKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTG 303

Query: 296 ----NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               ++VLWN  LSGY+    N  A+     +  S    DS T   AL       N+ LG
Sbjct: 304 SICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLG 363

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------------MGC--- 382
            Q+H   + SG     +VG+ L+++Y+K                          MGC   
Sbjct: 364 IQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKM 423

Query: 383 --------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           G+  DQ+ +++VL+  SSL   +   KQ+H   IK     +   
Sbjct: 424 ELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLAS-IGTGKQVHAFCIKRGYETEQVT 482

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            TALID+Y + G + +   LF      D+  W  +I G   +  +++ALE+F  M  SG 
Sbjct: 483 ITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGL 542

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS--GILDMYVKCGAMVDA 546
           + +E+T    + AC    ++ + + +    MK    L+  +     ++D+  + G   + 
Sbjct: 543 KPNEVTYLGVLTACRHAGLVVEAQTIFG-TMKCDHRLEPQLEHYYCMVDLLCQAGYFKEV 601

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           + +  ++P  PD   W++M+  C  +    L  +I   + L+    D   + +L  A   
Sbjct: 602 EKLIAEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENL-LANCPNDPSIYVMLSNAYGT 660

Query: 606 LTALEQGRQIHANLIKL 622
           L   +   Q+     KL
Sbjct: 661 LGMWDSLSQVREAAKKL 677



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 137/282 (48%), Gaps = 35/282 (12%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   I  A++ CG +  LKQGK  H++ +K+G+  ++ ++  ++ MY     ++DA  +
Sbjct: 1   MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTA 608
           F+++P  + V WTTM+S    NG+   A+ +Y +M  S   VP+ F +++++KA   +  
Sbjct: 61  FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE 120

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN------------------------- 643
           +E GR IH    + +   D  +  +L+DMY KCG                          
Sbjct: 121 IELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMIS 180

Query: 644 -------IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
                  +E+A  LF QM  RN V WN ++ GLA++G+    L+    M   G++ D  T
Sbjct: 181 GYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGS-SRALQFVCKMHREGIKLDKFT 239

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           F   L  CSY G +  A +  H    K G+E      S LVD
Sbjct: 240 FPCALKTCSYAGFLV-AGKQIHCYVLKSGLESSCFAVSALVD 280



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 5/238 (2%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           Q  H  +S  S    S L+  I+  ++ LG   HA I+ S    D  + + L+ +Y++ G
Sbjct: 334 QIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLG 393

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           ++  A +LF ++P +D+++W+ +L      G    E  +    LFR +        +  +
Sbjct: 394 NMKDAFKLFHRLPKKDIVAWSGLLM-----GCAKMELNSLALSLFRDMVTFGVEVDQYIV 448

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           + +LK+C S   +   + VH + +K G   ++    AL+++YSK G++ +   LF  + +
Sbjct: 449 SNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVAD 508

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           RDVV W  ++   A+NG   E   +F  + +SGL P++ +   VL      G   E Q
Sbjct: 509 RDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQ 566


>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 194/563 (34%), Positives = 298/563 (52%), Gaps = 60/563 (10%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYC-----RNGSMAEAEYLFENKDGFDLATWN 461
           LH  KQ H   ++   + DS+++ +L+  Y      R  S   +  +F+     ++  WN
Sbjct: 68  LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 127

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
            MI   I +N   KA+ L+  M  +  R ++ T    +KAC    ++ +G Q+HA+ +K 
Sbjct: 128 CMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKH 187

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           G   D  + S  + MY   G +V+A+ I +D     D        GC        AL I+
Sbjct: 188 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFME-----ALEIF 242

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
           HQM+   + P +F    ++ A + L AL+QGR IH    +     D  +G SLVDMYAKC
Sbjct: 243 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 302

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G I+ A+ +F++M  +    WNAM+ GLA HG  E+ + LF  M    + P+ +TF+GVL
Sbjct: 303 GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVL 359

Query: 702 SACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           +AC++ GLV +    F+ MR++YG+EP++EHY  +VD LGRAG   EA +++ S+P E +
Sbjct: 360 NACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPT 419

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
            ++  ALLGACR  G+ E G+ V + L+ LEP +S  Y LLSNI+A A +W++V   R  
Sbjct: 420 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 479

Query: 822 MKRKNVKKDPA----DL--------------------IFAKVEGLIKRIKEGGYVPDTDF 857
           MK + +K  P     DL                    I+  ++ + +R++  GY PD   
Sbjct: 480 MKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQ 539

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSN 896
           VL D++EEEKE A++ HSEKLA  +GLI+T P + I                     + N
Sbjct: 540 VLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYN 599

Query: 897 KEPLYAN--RFHHLRDGMCPCAD 917
           +E +  +  R+HH R+G C C D
Sbjct: 600 REIIVRDRIRYHHFRNGACSCKD 622



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 30/228 (13%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           N P  ++ L   +  +HF  +  +  + ++L+       +  G   HA ++      D  
Sbjct: 137 NEPFKAILLYYEMMVAHFRPNKYT--YPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGH 194

Query: 90  LTNNLMTMYSRCGSLVYARRLFDK---------MPDRDLISWNSILAAYAHSGEGNAENV 140
           + ++ + MY+  G LV ARR+ D          MPDR                       
Sbjct: 195 ILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGC-------------------F 235

Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
            E   +F  +++      +  L  +L  C + G +     +H YA +  +  D  +  +L
Sbjct: 236 MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSL 295

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           V++Y+K G+I  A  +F+ M  ++V  W  M+   A +G  E+   LF
Sbjct: 296 VDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF 343



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 95/462 (20%), Positives = 173/462 (37%), Gaps = 107/462 (23%)

Query: 155 TFTSRLTLAPLLKL----CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           T TS+L+   +L L    C +S  +   +  H   L+ G + D +++G+LV  Y+     
Sbjct: 46  TETSKLSHKAILHLLNTQCTTS--LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTN 103

Query: 211 REAKF-----LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           R   F     +FD +++ +V LW  M++   EN    +   L+ ++  +   P+  +   
Sbjct: 104 RYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPA 163

Query: 266 VLGVISDLGKRHEE-QVQAYAIKLLLYNN----NSNVVLWNK--KLSGYLQVGDNHG--- 315
           VL   SD G   E  QV A+ +K  L  +    +S + ++    +L    ++ D+ G   
Sbjct: 164 VLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 223

Query: 316 --------------AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
                         A+E F  M +  ++         L+A A    L+ G+ IH    ++
Sbjct: 224 DAVCMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN 283

Query: 362 GFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                 ++G SL++MY+K G +  L  + F   S    SS                    
Sbjct: 284 SIQLDGVLGTSLVDMYAKCGRI-DLAWEVFEKMSNKEVSS-------------------- 322

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH-----KA 476
                    A+I     +G   +A  LF   D       N + F  +L+  +H     K 
Sbjct: 323 -------WNAMIGGLAMHGRAEDAIDLFSKMD----INPNEITFVGVLNACAHGGLVQKG 371

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           L +F+ M        E  +   ++  GC                            I+D+
Sbjct: 372 LTIFNSMR------KEYGVEPQIEHYGC----------------------------IVDL 397

Query: 537 YVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
             + G + +A+ + + IP  P    W  ++  C  +G  +L 
Sbjct: 398 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELG 439



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 35/216 (16%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG-----NIEDAYILFKQMDMR 657
           + C T+L   +Q HA +++     D ++  SLV  YA        + E +  +F  +   
Sbjct: 62  TQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 121

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N  LWN M+    ++    + + L+ +M      P+  T+  VL ACS  G+V+E  +  
Sbjct: 122 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ-V 180

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI---------LSMP------FEASA 762
           H    K+G+  +    S  +      GR  EA  ++         + MP       EA  
Sbjct: 181 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFMEALE 240

Query: 763 SMHR--------------ALLGACRVQGDTETGKWV 784
             H+              ++L AC   G  + G+W+
Sbjct: 241 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWI 276


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 225/672 (33%), Positives = 330/672 (49%), Gaps = 98/672 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV WN  LSGY Q G    A E F  M   N    S+++   LAA      +   +++ 
Sbjct: 60  DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRL- 114

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
               +S     +I  N ++  Y K          +  L         +PE          
Sbjct: 115 ---FESKADWELISWNCMMGGYVK----------RNRLVDARGIFDRMPE---------- 151

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
                    D      +I  Y +NG + EA+ LFE     D+ TW AM+ GY+ +    +
Sbjct: 152 --------RDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDE 203

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC--VSS-- 531
           A  +F  M           IA  V+   C  M  Q +++        FE   C  VSS  
Sbjct: 204 ARRVFDGMPEKNSVSWNAIIAGYVQ---CKRM-DQAREL--------FEAMPCQNVSSWN 251

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++  Y + G +  A++ F+ +P  D ++W  +I+G   +G  + AL ++ +M+  G   
Sbjct: 252 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 311

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  TF   +   + + ALE G+Q+H  ++K    S  +VG +L+ MY KCGNI+DAYI+F
Sbjct: 312 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVF 371

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           + ++ +  V WN M+ G A+HG G+E L LFE MK  G+ PD VT +GVLSACS+TGLV 
Sbjct: 372 EGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD 431

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           +  E F+ M + YGI    +HY+ ++D LGRAGR  +A  L+ +MPFE  A+   ALLGA
Sbjct: 432 KGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
            R+ G+TE G+  A+ +  +EP +S  YVLLSN++AA+ +W DV   R  M+ + VKK P
Sbjct: 492 SRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVP 551

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                   D I+  +E L  ++K+ GYV  T  VL DVEEEEK 
Sbjct: 552 GYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKV 611

Query: 869 RALYYHSEKLARAYGLISTP---PSSVI--LSNKEPLY------------------ANRF 905
             L YHSEKLA A+G+++ P   P  VI  L   E  +                  ++RF
Sbjct: 612 HMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRF 671

Query: 906 HHLRDGMCPCAD 917
           HH   G C C D
Sbjct: 672 HHFNGGQCSCGD 683



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 229/517 (44%), Gaps = 55/517 (10%)

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           ++  +R A+ LFD M ERDVV W  ML  YA+NG+ +E   +F ++     C +  S   
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNG 97

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           +L      G+  +      A +L     +  ++ WN  + GY++      A   F  M  
Sbjct: 98  MLAAYVQNGRIED------ARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM-- 149

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
              + D V++   ++  A    L   Q++     +      V    ++++ Y + G    
Sbjct: 150 --PERDEVSWNTMISGYAQNGELLEAQRL----FEESPVRDVFTWTAMVSGYVQNG---- 199

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQI----HVHAIKNDTVADSFVS---------TAL 432
                  L    R    +PE   +S       +V   + D   + F +           +
Sbjct: 200 ------MLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTM 253

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I  Y +NG +A+A   F+     D  +W A+I GY  S    +AL LF  M   GERL+ 
Sbjct: 254 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 313

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T  + +  C  +  L+ GKQ+H   +K+G E    V + +L MY KCG + DA  +F  
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 373

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           I   + V+W TMI+G   +G    AL ++  M+ +G++PD+ T   ++ A S    +++G
Sbjct: 374 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG 433

Query: 613 RQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVG 668
            +   ++ +   +  +S  +    ++D+  + G ++DA  L K M    +   W A+L  
Sbjct: 434 TEYFYSMTQDYGITANSKHYT--CMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491

Query: 669 LAQHGN---GEETLKLFEDMKAHGVEPDSVTFIGVLS 702
              HGN   GE+  K+  +M     EPD+     +LS
Sbjct: 492 SRIHGNTELGEKAAKMIFEM-----EPDNSGMYVLLS 523



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 235/514 (45%), Gaps = 74/514 (14%)

Query: 77  ARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           AR+L   Q+P+R +   N +++ Y++ G +  A+ +FD+MP ++ ISWN +LAAY  +G 
Sbjct: 49  ARLL-FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR 107

Query: 135 GNAENVTEGFRLFRSLR--ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL------ 186
                + +  RLF S    E I++            C+  GYV  +  V    +      
Sbjct: 108 -----IEDARRLFESKADWELISWN-----------CMMGGYVKRNRLVDARGIFDRMPE 151

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           +  + W+  +SG     Y++ G++ EA+ LF+    RDV  W  M+  Y +NG  +E   
Sbjct: 152 RDEVSWNTMISG-----YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARR 206

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           +F  +      P+  SV     +   +  +  +Q    A +L       NV  WN  ++G
Sbjct: 207 VFDGM------PEKNSVSWNAIIAGYVQCKRMDQ----ARELFEAMPCQNVSSWNTMITG 256

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA 366
           Y Q GD   A   F  M     Q DS+++   +A  A                +SG+   
Sbjct: 257 YAQNGDIAQARNFFDRM----PQRDSISWAAIIAGYA----------------QSGY--- 293

Query: 367 VIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
              G   ++++ +M    G R ++ T  S L   + +   L L KQ+H   +K    +  
Sbjct: 294 ---GEEALHLFVEMK-RDGERLNRSTFTSTLSTCAEIA-ALELGKQVHGRVVKAGLESGC 348

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +V  AL+ +YC+ G++ +A  +FE  +  ++ +WN MI GY       +AL LF  M  +
Sbjct: 349 YVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT 408

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMV 544
           G   D++T+   + AC    ++ +G + + Y+M   + +       + ++D+  + G + 
Sbjct: 409 GILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 467

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           DAQ++  ++P  PD   W  ++     +G  +L 
Sbjct: 468 DAQNLMKNMPFEPDAATWGALLGASRIHGNTELG 501



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 106/232 (45%), Gaps = 15/232 (6%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F++        + S + S L      + L LGK  H R++ +      ++ N L+ MY +
Sbjct: 301 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 360

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG++  A  +F+ + +++++SWN+++A YA  G G      E   LF S++++      +
Sbjct: 361 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGK-----EALMLFESMKKTGILPDDV 415

Query: 161 TLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           T+  +L  C  +G V   +E  +      G+  +      ++++  + G++ +A+ L   
Sbjct: 416 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 475

Query: 220 MQ-ERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           M  E D   W  +L   R +     GE+   +  ++      PD+  +  +L
Sbjct: 476 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME-----PDNSGMYVLL 522



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 27/230 (11%)

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+ +F+ +P  D V+W  M+SG   NG    A  I+ +M     +      A  V+    
Sbjct: 49  ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR- 107

Query: 606 LTALEQGRQIHAN-----LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
              +E  R++  +     LI  +C         ++  Y K   + DA  +F +M  R+ V
Sbjct: 108 ---IEDARRLFESKADWELISWNC---------MMGGYVKRNRLVDARGIFDRMPERDEV 155

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WN M+ G AQ+G   E  +LFE+        D  T+  ++S     G++ EA   F  M
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGM 211

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            EK  +      ++ ++    +  R  +A EL  +MP +  +S +  + G
Sbjct: 212 PEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITG 256



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           N+  A +LF QM  R+ V WNAML G AQ+G  +E  ++F++M       +S+++ G+L+
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNGMLA 100

Query: 703 ACSYTGLVSEAYENF 717
           A    G + +A   F
Sbjct: 101 AYVQNGRIEDARRLF 115


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 187/553 (33%), Positives = 299/553 (54%), Gaps = 47/553 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K++  + I +    D +V   ++ ++ + G M +A  LF+     D+A+W  M+ G + +
Sbjct: 138 KRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDT 197

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            N  +A  LF  M          T AT ++A   L +++ GKQ+H+ A+K G   D  VS
Sbjct: 198 GNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVS 257

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMY KCG++ DA  +F+ +P    V W ++I+    +G  + ALS+Y +MR SG  
Sbjct: 258 CALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTT 317

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D FT +I+++  + L +LE  +Q HA L++   ++D     +LVD Y+K G +EDA  +
Sbjct: 318 VDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHV 377

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M  +N + WNA++ G   HG G+E +++FE M   GV P  VTF+ VLSACSY+GL 
Sbjct: 378 FNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLS 437

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +E F+ M+  + ++P   HY+ +++ LGR     EA  LI + PF+ +A+M  ALL 
Sbjct: 438 QRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLT 497

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK----- 825
           ACR+  + E GK  AEKL  +EP     Y++L N++ ++ +  +       +K+K     
Sbjct: 498 ACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRML 557

Query: 826 ------NVKKDPADL------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
                  VKK P               I+ KV+ L+  I + GY  + + +L DV+EEE 
Sbjct: 558 PACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEE- 616

Query: 868 ERALYYHSEKLARAYGLISTP---PSSV------------------ILSNKEPLY--ANR 904
           +R L YHSEKLA A+GLI+TP   P  +                  +++ +E +   A+R
Sbjct: 617 QRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASR 676

Query: 905 FHHLRDGMCPCAD 917
           FHH R+G C C D
Sbjct: 677 FHHFRNGSCSCGD 689



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 153/284 (53%), Gaps = 3/284 (1%)

Query: 468 ILSNNSHKALELFS--HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           ++ N   +A+ELF    +   G  +   T    V AC  L  ++  K++  Y + SGFE 
Sbjct: 92  VVCNRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEP 151

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           DL V + +L M+VKCG M+DA+ +F+++P  D  +W TM+ G VD G    A  ++  M 
Sbjct: 152 DLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMW 211

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
                    TFA +++AS+ L  ++ G+QIH+  +K     D FV  +L+DMY+KCG+IE
Sbjct: 212 KEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIE 271

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           DA+ +F QM  + TV WN+++   A HG  EE L L+ +M+  G   D  T   V+  C+
Sbjct: 272 DAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICA 331

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
               +  A +  H    ++G   ++   + LVD   + GR ++A
Sbjct: 332 RLASLEHA-KQAHAALVRHGFATDIVANTALVDFYSKWGRMEDA 374



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 175/337 (51%), Gaps = 10/337 (2%)

Query: 392 TLASVLRASSSLPEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           T A+++RAS+ L  GL  + KQIH  A+K     D FVS ALID+Y + GS+ +A  +F+
Sbjct: 221 TFATMIRASAGL--GLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFD 278

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                    WN++I  Y L   S +AL L+  M  SG  +D  TI+  ++ C  L  L+ 
Sbjct: 279 QMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEH 338

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
            KQ HA  ++ GF  D+  ++ ++D Y K G M DA+ +FN +   + ++W  +I+G  +
Sbjct: 339 AKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGN 398

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +G+   A+ ++ QM   GV P   TF  ++ A S     ++G +I  ++ K D    P  
Sbjct: 399 HGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSM-KRDHKVKPRA 457

Query: 631 G--ISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKA 687
                ++++  +   +++AY L +    + T  +W A+L     H N E  L      K 
Sbjct: 458 MHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLE--LGKLAAEKL 515

Query: 688 HGVEPDSV-TFIGVLSACSYTGLVSEAYENFHLMREK 723
           +G+EP+ +  +I +L+  + +G + EA      +++K
Sbjct: 516 YGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKK 552



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 34/338 (10%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ L   L+  H      +S + +++   +    +   K     ++NS   PD ++ N +
Sbjct: 100 AMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRV 159

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + M+ +CG ++ AR+LFD+MP++D+ SW +++     +G     N +E FRLF  + +  
Sbjct: 160 LFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTG-----NFSEAFRLFLCMWKEF 214

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T A +++     G V   + +H  ALK G+  D FVS AL+++YSK G I +A 
Sbjct: 215 NDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAH 274

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD M E+  V W  ++ +YA +G+ EE   L+ ++  SG   D  ++  V+ + + L 
Sbjct: 275 CVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLA 334

Query: 275 K-RHEEQVQA------YAIKLL--------------------LYN--NNSNVVLWNKKLS 305
              H +Q  A      +A  ++                    ++N   + NV+ WN  ++
Sbjct: 335 SLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIA 394

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           GY   G    A+E F  M++  V    VTFL  L+A +
Sbjct: 395 GYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACS 432



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 5/222 (2%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + +++R +     + +GK  H+  L      D F++  L+ MYS+CGS+  A  +FD
Sbjct: 219 SRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFD 278

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +MP++  + WNSI+A+YA  G        E   L+  +R+S T     T++ ++++C   
Sbjct: 279 QMPEKTTVGWNSIIASYALHGYSE-----EALSLYFEMRDSGTTVDHFTISIVIRICARL 333

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +  ++  H   ++ G   D   + ALV+ YSK+G++ +A+ +F+ M+ ++V+ W  ++
Sbjct: 334 ASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALI 393

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             Y  +G G+E   +F  + + G+ P   +   VL   S  G
Sbjct: 394 AGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSG 435



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 177/463 (38%), Gaps = 84/463 (18%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A KL       +V  W   + G +  G+   A   F+ M +      S TF   + A AG
Sbjct: 172 ARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAG 231

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------CV--------------- 383
              + +G+QIH   LK G      V  +LI+MYSK G      CV               
Sbjct: 232 LGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSI 291

Query: 384 ----------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G   D FT++ V+R  + L    H +KQ H   +++ 
Sbjct: 292 IASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEH-AKQAHAALVRHG 350

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              D   +TAL+D Y + G M +A ++F      ++ +WNA+I GY       +A+E+F 
Sbjct: 351 FATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFE 410

Query: 482 HMHTSGERLDEITIATAVKACG----------CLLMLKQGKQMHAYAMKSGFELDLCVSS 531
            M   G     +T    + AC               +K+  ++   AM     ++L    
Sbjct: 411 QMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRE 470

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            +LD         +A ++    P  P    W  +++ C     ++L L      +L G+ 
Sbjct: 471 SLLD---------EAYALIRTAPFKPTANMWAALLTAC--RMHKNLELGKLAAEKLYGME 519

Query: 591 PDEF-TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK-----CGNI 644
           P++   + +L+   +    L++   I   L K      P    S V++  +     CG+ 
Sbjct: 520 PEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLP--ACSWVEVKKQPYAFLCGDK 577

Query: 645 EDAYI--LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
             +    +++++D         ++V + +HG  EE   L  D+
Sbjct: 578 SHSQTKEIYQKVD--------NLMVEICKHGYAEENETLLPDV 612


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 232/769 (30%), Positives = 359/769 (46%), Gaps = 139/769 (18%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           A+++ Y +  K   A+ LFD M  +D+  W +ML  YA N    +   LF  +      P
Sbjct: 69  AMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSM------P 122

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           +                                    +VV WN  LSGY++ G    A +
Sbjct: 123 E-----------------------------------KDVVSWNAMLSGYVRSGHVDEARD 147

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M   N    S+++   LAA   +  L   +++  +  KS +   +I  N L+  Y 
Sbjct: 148 VFDRMPHKN----SISWNGLLAAYVRSGRLEEARRLFES--KSDW--ELISCNCLMGGYV 199

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           K                     + L +   L  QI         V D      +I  Y +
Sbjct: 200 K--------------------RNMLGDARQLFDQI--------PVRDLISWNTMISGYAQ 231

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           +G +++A  LFE     D+ TW AM++ Y+      +A  +F  M    E    + IA  
Sbjct: 232 DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGY 291

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG----ILDMYVKCGAMVDAQSIFNDIP 554
            +       +  G+++        FE     + G    ++  Y + G +  A+++F+ +P
Sbjct: 292 AQ----YKRMDMGREL--------FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMP 339

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             D V+W  +I+G   NG  + A+++  +M+  G   +  TF   + A + + ALE G+Q
Sbjct: 340 QRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQ 399

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H  +++        VG +LV MY KCG I++AY +F+ +  ++ V WN ML G A+HG 
Sbjct: 400 VHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGF 459

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
           G + L +FE M   GV+PD +T +GVLSACS+TGL     E FH M + YGI P  +HY+
Sbjct: 460 GRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYA 519

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            ++D LGRAG  +EA  LI +MPFE  A+   ALLGA R+ G+ E G+  AE +  +EP 
Sbjct: 520 CMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPH 579

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +S  YVLLSN++AA+ +W DV+  R +M++  V+K P                       
Sbjct: 580 NSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPE 639

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
              I+A +E L  ++K  GYV  T  VL DVEEEEK+  L YHSEKLA A+G+++ P   
Sbjct: 640 KGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGK 699

Query: 892 VILSNK-----EPLY------------------ANRFHHLRDGMCPCAD 917
            I   K     E  +                  ++R+HH  +G+C C D
Sbjct: 700 PIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRD 748



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 220/540 (40%), Gaps = 130/540 (24%)

Query: 60  LRHAISTSDLLLGKSTHAR------ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           LR+++S + ++ G   +A+      + +     D F  N ++T Y+R   L  AR LFD 
Sbjct: 61  LRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDS 120

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLT-------LAP 164
           MP++D++SWN++L+ Y  SG     +V E   +F  +  + SI++   L        L  
Sbjct: 121 MPEKDVVSWNAMLSGYVRSG-----HVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEE 175

Query: 165 LLKL-------------CLSSGYVW------ASETVHGYALKIGLVWDEFVSGALVNIYS 205
             +L             CL  GYV       A +      ++  + W+  +SG     Y+
Sbjct: 176 ARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISG-----YA 230

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           + G + +A+ LF+    RDV  W  M+ AY ++G  +E   +F ++      P    +  
Sbjct: 231 QDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM------PQKREMSY 284

Query: 266 VLGVIS-------DLGKRHEEQ-----VQAYAIKLLLYNNNSNV---------------V 298
            + +         D+G+   E+     + ++ I +  Y  N ++               V
Sbjct: 285 NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSV 344

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W   ++GY Q G    A+   V M R     +  TF  AL+A A    L LG+Q+HG  
Sbjct: 345 SWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQV 404

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
           +++G+    +VGN+L+ MY K GC+                                   
Sbjct: 405 VRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQAL 464

Query: 384 --------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND--TVADSFVSTALI 433
                    G++ D+ T+  VL A S    GL      + H++  D     +S     +I
Sbjct: 465 TVFESMITAGVKPDEITMVGVLSACSH--TGLTDRGTEYFHSMNKDYGITPNSKHYACMI 522

Query: 434 DVYCRNGSMAEAEYLFENKD-GFDLATWNAMIFGYILSNN---SHKALELFSHM--HTSG 487
           D+  R G + EA+ L  N     D ATW A++    +  N     +A E+   M  H SG
Sbjct: 523 DLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSG 582



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 20/281 (7%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N +++ Y + G L  AR LFD MP RD +SW +I+A YA +G        E   +   ++
Sbjct: 316 NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGL-----YEEAMNMLVEMK 370

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 +R T    L  C     +   + VHG  ++ G      V  ALV +Y K G I 
Sbjct: 371 RDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCID 430

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA  +F G+Q +D+V W  ML  YA +GFG +   +F  +  +G+ PD+ ++  VL   S
Sbjct: 431 EAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACS 490

Query: 272 DLG--KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NV 328
             G   R  E   +        N +  +   +K  +  + +    G +E   N+IR+   
Sbjct: 491 HTGLTDRGTEYFHS-------MNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPF 543

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK-----SGFY 364
           + D+ T+   L A     N+ LG+Q      K     SG Y
Sbjct: 544 EPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMY 584



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 119/561 (21%), Positives = 225/561 (40%), Gaps = 94/561 (16%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P        ++ + R G    A  +FD MP R+ +S+N++++ Y  + +         F 
Sbjct: 31  PHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAK---------FS 81

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS-GALVNIY 204
           L R L + +      +   +L     +GY           L   +   + VS  A+++ Y
Sbjct: 82  LARDLFDKMPHKDLFSWNLML-----TGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGY 136

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            + G + EA+ +FD M  ++ + W  +L AY  +G  EE   LF       L     S  
Sbjct: 137 VRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELI----SCN 192

Query: 265 CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF---- 320
           C++G         +  +   A +L       +++ WN  +SGY Q GD   A   F    
Sbjct: 193 CLMGGYV------KRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESP 246

Query: 321 -------VNMIRSNVQ----------YD------SVTFLVALAAVAGTDNLNLGQQI--- 354
                    M+ + VQ          +D       +++ V +A  A    +++G+++   
Sbjct: 247 VRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEE 306

Query: 355 -------HGTTLKSGF-----------------------YSAVIVGNSLINMYSK-MGCV 383
                      + SG+                       ++A+I G +   +Y + M  +
Sbjct: 307 MPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNML 366

Query: 384 CGLRTD-----QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
             ++ D     + T    L A + +   L L KQ+H   ++        V  AL+ +YC+
Sbjct: 367 VEMKRDGESLNRSTFCCALSACADIA-ALELGKQVHGQVVRTGYEKGCLVGNALVGMYCK 425

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G + EA  +F+     D+ +WN M+ GY       +AL +F  M T+G + DEIT+   
Sbjct: 426 CGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGV 485

Query: 499 VKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-AP 556
           + AC    +  +G +  H+     G   +    + ++D+  + G + +AQ++  ++P  P
Sbjct: 486 LSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEP 545

Query: 557 DDVAWTTMISGCVDNGEEDLA 577
           D   W  ++     +G  +L 
Sbjct: 546 DAATWGALLGASRIHGNMELG 566



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 12/195 (6%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H +++ +       + N L+ MY +CG +  A  +F  +  +D++SWN++LA 
Sbjct: 394 LELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAG 453

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALK 187
           YA  G G      +   +F S+  +      +T+  +L  C  +G     +E  H     
Sbjct: 454 YARHGFGR-----QALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKD 508

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEE 243
            G+  +      ++++  + G + EA+ L   M  E D   W  +L   R +     GE+
Sbjct: 509 YGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQ 568

Query: 244 VFHLFVDL--HRSGL 256
              +   +  H SG+
Sbjct: 569 AAEMVFKMEPHNSGM 583



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 14/163 (8%)

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQ 614
           P  V  T  IS  + NG  DLAL ++  M L   V  +      L  A   L      + 
Sbjct: 31  PHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM 90

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H +L   +          ++  YA+   + DA +LF  M  ++ V WNAML G  + G+
Sbjct: 91  PHKDLFSWNL---------MLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGH 141

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
            +E   +F+ M       +S+++ G+L+A   +G + EA   F
Sbjct: 142 VDEARDVFDRMP----HKNSISWNGLLAAYVRSGRLEEARRLF 180


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 218/717 (30%), Positives = 355/717 (49%), Gaps = 83/717 (11%)

Query: 196 VSGALVNIYSKFGKIREAKFLF--DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
           ++GAL+  Y+    I  A+ +     ++ R   LW  + RA A  G   E   ++  + R
Sbjct: 40  LAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMVR 99

Query: 254 SGLCPDDESVQCVLGVISDL--------GKRHEEQVQAYAIKLLL---YNNNS------- 295
           SG+ PDD +    L   +           K  E    A    LLL   +  N+       
Sbjct: 100 SGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAA 159

Query: 296 -----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            ++V WN  +S  L  G    A    V M+RS +  + V  LV+
Sbjct: 160 RGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVN-VASLVS 218

Query: 339 LAAVAGTD-NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------ 379
           +    GT+ +   G  +HG  LKSG  S V +GN+L++MY K                  
Sbjct: 219 VVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKN 278

Query: 380 -------MGCVC--GLRTDQFTLASVLRA----------SSSLPEGL-----HLSKQIHV 415
                  +GC    G   D   +  V+            SS LP  +     HL K++H 
Sbjct: 279 EVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHG 338

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           ++I+    +D F++ +L+D+Y + G + +A  +FEN +G ++ +WNAMI     +    +
Sbjct: 339 YSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETE 398

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           A  L   M  +GE  +  T+   + AC  +  +K GKQ+HA+++      DL VS+ ++D
Sbjct: 399 AFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALID 458

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           +Y KCG +  AQ IF D    DDV++ T+I G   +     +L ++ QMR +G+  D  +
Sbjct: 459 VYAKCGQLSVAQDIF-DRSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVS 517

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F   + A + L+A +QG++IH  L++   ++ PF+  SL+D+Y K G +  A  +F ++ 
Sbjct: 518 FMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRIT 577

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++   WN M++G   HG  +   +LF+ MK  GV+ D V++I VLSACS+ GLV    +
Sbjct: 578 RKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKK 637

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  M  +  I+P+  HY+ +VD LGRAG+  E+ E+I +MPF A++ +  ALLG+CR+ 
Sbjct: 638 YFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIH 696

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           GD E  +  AE L  L+P  S  Y LL N+++ +  W++    +  MK + V+K+PA
Sbjct: 697 GDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPA 753



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 35/312 (11%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H   +  +   D F+ N+LM MY++ G L  A  +F+ +  R+++SWN+++A  A
Sbjct: 332 LGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLA 391

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G   AE  TE F L   ++++    +  TL  LL  C     V   + +H +++   L
Sbjct: 392 QNG---AE--TEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSL 446

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           + D FVS AL+++Y+K G++  A+ +FD   E+D V +  ++  Y+++    E  HLF  
Sbjct: 447 MSDLFVSNALIDVYAKCGQLSVAQDIFD-RSEKDDVSYNTLIVGYSQSQCCFESLHLFQQ 505

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN---------------- 293
           +  +G+  D  S    L   ++L   +  +++    ++ LL  +                
Sbjct: 506 MRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGM 565

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                         +V  WN  + GY   G    A E F  M    V YD V+++  L+A
Sbjct: 566 LATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSA 625

Query: 342 VAGTDNLNLGQQ 353
            +    ++ G++
Sbjct: 626 CSHGGLVDRGKK 637


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 205/612 (33%), Positives = 320/612 (52%), Gaps = 69/612 (11%)

Query: 368 IVGNSLINMYSKMGCVC------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
           +V   LI  Y + GC              G   D ++++S++ A + L   + L +Q+H 
Sbjct: 212 VVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGS-VRLGQQLHS 270

Query: 416 HAIKNDTVADSFVSTALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSN- 471
            A++   V+DS VS  L+D+Y +     SM  A  +F+     ++ +W A+I GY+ S  
Sbjct: 271 VALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGV 330

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
             +  + LF  M     R + IT +  +KAC  L     G+Q+HA+ +K+       V +
Sbjct: 331 QENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGN 390

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY + G M +A+  F      D +  T ++S   D   E    S   ++       
Sbjct: 391 ALVSMYAESGCMEEARKAF------DQLYETNILSMSPDVETERNNASCSSKIEGMDDGV 444

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
             FTFA L+ A++ +  L +G+++HA  +K    SD  +  SLV MYA+CG +EDA   F
Sbjct: 445 STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAF 504

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   N + W +++ GLA+HG  ++ L +F DM   GV+P+ VT+I VLSACS+ GLV 
Sbjct: 505 DEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVK 564

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  E+F  M++ +G+ P +EHY+ +VD L R+G  +EA + I  MP +A A + + LL A
Sbjct: 565 EGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR  G+TE G+  A  ++ LEP D + YVLLSN++A A  WD+V   R  M+ KN+ K+ 
Sbjct: 625 CRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKET 684

Query: 832 -----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                  A  I+AK+  LI+ IK+ GYVPDT  VL D+ EE KE
Sbjct: 685 GLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKE 744

Query: 869 RALYYHSEKLARAYGLISTPPSSVIL---------------------SNKEPLY--ANRF 905
           + L  HSEK+A A+GLI+T  +  +                      + +E +   +NRF
Sbjct: 745 QYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRF 804

Query: 906 HHLRDGMCPCAD 917
           H ++DG+C C +
Sbjct: 805 HRMKDGICSCGE 816



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/606 (26%), Positives = 288/606 (47%), Gaps = 86/606 (14%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYA 107
           SS  S     +L  A    DL LG++ H R+L S  +  D  + N+L+TMYS+CG++  A
Sbjct: 36  SSDHSCDAAKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAA 95

Query: 108 RRLFDKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLL 166
           RR+FD+M   RDL+SW ++ +  A +G   AE   E  RL   + E     +  TL    
Sbjct: 96  RRVFDQMCGVRDLVSWTAMASCLARNG---AER--ESLRLLGEMLELGLRPNAFTLCAAA 150

Query: 167 KLCLSSG-YVWASETVHGYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
           + C     +  A   V G+ LK G  W  D  V  AL++++++ G +  A+ +FDG+ ER
Sbjct: 151 RACFPQELFRLAGGVVLGFVLKTGF-WGTDVSVGCALIDMFARNGDLVAAQRVFDGLIER 209

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQ 282
             V+W +++  Y + G   +V  LF+ +   G  PD  S+  ++   ++LG  R  +Q+ 
Sbjct: 210 TSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLH 269

Query: 283 AYAIKLLLYNNNS-------------------------------NVVLWNKKLSGYLQVG 311
           + A++L L +++                                NV+ W   +SGY+Q G
Sbjct: 270 SVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSG 329

Query: 312 -DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
              +  +  F  M+  +++ + +T+   L A A   + + G+QIH   LK+      +VG
Sbjct: 330 VQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVG 389

Query: 371 NSLINMYSKMGCVCGLRT--DQ-----------------------------------FTL 393
           N+L++MY++ GC+   R   DQ                                   FT 
Sbjct: 390 NALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTF 449

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           AS+L A++S+   L   +++H  ++K    +D  +S +L+ +Y R G + +A   F+   
Sbjct: 450 ASLLSAAASVGL-LTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK 508

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             ++ +W ++I G      + +AL +F  M  +G + +++T    + AC  + ++K+GK+
Sbjct: 509 DHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE 568

Query: 514 MHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVD 570
            H  +M+   G    +   + I+D+  + G + +A+   N++P   D + W T++S C  
Sbjct: 569 -HFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRT 627

Query: 571 NGEEDL 576
            G  ++
Sbjct: 628 YGNTEI 633



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 229/491 (46%), Gaps = 70/491 (14%)

Query: 317 IECFVN------MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIV 369
           I C +N      ++ S+   D+   L + AA AG  +L LG+ +H   L+S       +V
Sbjct: 22  IRCHLNPLTAHLVLSSDHSCDAAKLLTS-AARAG--DLRLGRALHRRLLRSEILDTDAVV 78

Query: 370 GNSLINMYSKMGCV----------CGLR-------------------------------- 387
            NSL+ MYSK G V          CG+R                                
Sbjct: 79  ANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELG 138

Query: 388 --TDQFTLASVLRASSSLPEGL-HLSKQIHVHAIKNDTV--ADSFVSTALIDVYCRNGSM 442
              + FTL +  RA    P+ L  L+  + +  +        D  V  ALID++ RNG +
Sbjct: 139 LRPNAFTLCAAARAC--FPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDL 196

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A+ +F+         W  +I  Y+ +  + K +ELF HM   G   D  ++++ + AC
Sbjct: 197 VAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISAC 256

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG---AMVDAQSIFNDIPAPDDV 559
             L  ++ G+Q+H+ A++ G   D CVS G++DMY K     +M  A+ +F  +P  + +
Sbjct: 257 TELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVM 316

Query: 560 AWTTMISGCVDNG-EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           +WT +ISG V +G +E+  ++++ +M    + P+  T++ L+KA + L+  + GRQIHA+
Sbjct: 317 SWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAH 376

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++K   +    VG +LV MYA+ G +E+A   F Q+   N +   +M   +    N    
Sbjct: 377 VLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNIL---SMSPDVETERNNASC 433

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
               E M   GV   + TF  +LSA +  GL+++  +  H +  K G   +    + LV 
Sbjct: 434 SSKIEGMD-DGVS--TFTFASLLSAAASVGLLTKG-QKLHALSMKAGFRSDQGISNSLVS 489

Query: 739 ALGRAGRTKEA 749
              R G  ++A
Sbjct: 490 MYARCGYLEDA 500



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S+  + S+L  A S   L  G+  HA  + +    D+ ++N+L++MY+RCG L  A R F
Sbjct: 445 STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAF 504

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D+M D ++ISW SI++  A  G        +   +F  +  +    + +T   +L  C  
Sbjct: 505 DEMKDHNVISWTSIISGLAKHGYAK-----QALSMFHDMILAGVKPNDVTYIAVLSACSH 559

Query: 172 SGYVW-ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
            G V    E         GL+        +V++ ++ G + EA+   + M  + D ++WK
Sbjct: 560 VGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWK 619

Query: 230 VML---RAYAENGFGEEVFHLFVDLHRSGLCP 258
            +L   R Y     GE   +  ++L      P
Sbjct: 620 TLLSACRTYGNTEIGEIAANHVINLEPRDPAP 651


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 215/678 (31%), Positives = 332/678 (48%), Gaps = 64/678 (9%)

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           + G +  A+ L D M +R+VV W  ++ A A +    E   L+  + R GL P   ++  
Sbjct: 86  RAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLAS 145

Query: 266 VL---GVIS--DLGKR-HEEQVQAY-----------------------AIKLLLYNNNSN 296
           VL   G ++  D G+R H   V+                         A++L     + N
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPN 205

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG--------TDNL 348
            V +   + G +Q G    A+  F  M RS V+ D V     L + A             
Sbjct: 206 EVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAF 265

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
            LGQ IH   ++ GF S   VGNSLI+MY+K      ++ D+      ++   SLP    
Sbjct: 266 RLGQCIHALIVRKGFGSDQHVGNSLIDMYTKC-----MQMDE-----AVKVFDSLPNIST 315

Query: 409 LSKQIHVHAI-----------------KNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           +S  I +                    ++ +  +    + ++    +   +  A  +F+ 
Sbjct: 316 VSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDK 375

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
                + TWN ++ GY         +ELF  M     + D  T+A  + +C  L +L  G
Sbjct: 376 ISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLG 435

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
            Q+H+ +++     D+ V+SG++DMY KCG +  A+ IFN +   D V W +MISG   +
Sbjct: 436 TQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIH 495

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              + A   + QMR +G++P E ++A ++ + + L+++ QGRQIHA ++K     + +VG
Sbjct: 496 SLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVG 555

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +L+DMYAKCGN++DA + F  M  +N V WN M+ G AQ+G GE+ + LFE M      
Sbjct: 556 SALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQR 615

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           PD VTFI VL+ CS++GLV EA   F+ M   YGI P  EHY+ L+D LGRAGR  E   
Sbjct: 616 PDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEA 675

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           LI +MP +    +   LL AC V  + E G+  A+ L  L+P + S YVLLSNI+A+  +
Sbjct: 676 LIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGR 735

Query: 812 WDDVTSARGEMKRKNVKK 829
             D +  R  M  + V K
Sbjct: 736 HGDASGVRALMSSRGVVK 753



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 176/656 (26%), Positives = 296/656 (45%), Gaps = 73/656 (11%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           R   S   P+ +  N  ++   R G L  AR L D+MPDR+++SWN+++AA A S     
Sbjct: 64  RAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARS----- 118

Query: 138 ENVTEGFRLFRS-LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
           E   E   L+   LRE +  T   TLA +L  C +   +      HG A+K+GL  + FV
Sbjct: 119 ERAGEALELYEGMLREGLVPT-HFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFV 177

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
             AL+ +Y+K G + +A  LFDGM   + V +  M+    + G  ++   LF  + RSG+
Sbjct: 178 ENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGV 237

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAY-------------------------------- 284
             D  +V  VLG  +       + V+A+                                
Sbjct: 238 RVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKC 297

Query: 285 -----AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                A+K+     N + V WN  ++G+ Q G    A+E    M  S  + + VT+   L
Sbjct: 298 MQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNML 357

Query: 340 A----------AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTD 389
           A          A A  D ++        TL SG+    +  ++ + ++ +M     ++ D
Sbjct: 358 ASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDT-VELFRRMQHQ-NVQPD 415

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           + TLA +L + S L   L L  Q+H  +++     D FV++ L+D+Y + G +  A  +F
Sbjct: 416 RTTLAVILSSCSRLGI-LDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIF 474

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                 D+  WN+MI G  + + + +A + F  M  +G    E + A+ + +C  L  + 
Sbjct: 475 NRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVP 534

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           QG+Q+HA  +K G++ ++ V S ++DMY KCG M DA+  F+ +   + VAW  MI G  
Sbjct: 535 QGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYA 594

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG  + A+ ++  M  +   PD  TF  ++   S    +++        I    S +  
Sbjct: 595 QNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEA-------IAFFNSMEST 647

Query: 630 VGIS--------LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            GI+        L+D   + G + +   L   M  + + ++W  +L   A H N E
Sbjct: 648 YGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAE 703



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/607 (22%), Positives = 267/607 (43%), Gaps = 80/607 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    + + L  G+  H   +      + F+ N L+ MY++CG +  A RLFD M   
Sbjct: 145 SVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASP 204

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + +S+ +++     +G     +V +  RLF  +  S      + ++ +L  C  +    A
Sbjct: 205 NEVSFTAMMGGLVQAG-----SVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQA---CA 256

Query: 178 SE-----------TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           SE            +H   ++ G   D+ V  +L+++Y+K  ++ EA  +FD +     V
Sbjct: 257 SEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTV 316

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI 286
            W +++  + + G   +   +   +  SG  P++ +   +L   S +  R     +A   
Sbjct: 317 SWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLA--SCIKARDVLSARAMFD 374

Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           K+    +  +V  WN  LSGY Q   +   +E F  M   NVQ D  T  V L++ +   
Sbjct: 375 KI----SRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLG 430

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------CVC------ 384
            L+LG Q+H  +++   ++ + V + L++MYSK G                 VC      
Sbjct: 431 ILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMIS 490

Query: 385 ---------------------GLRTDQFTLASVLRAS---SSLPEGLHLSKQIHVHAIKN 420
                                G+   + + AS++ +    SS+P+G    +QIH   +K+
Sbjct: 491 GLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQG----RQIHAQIVKD 546

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               + +V +ALID+Y + G+M +A   F+     ++  WN MI GY  +    KA++LF
Sbjct: 547 GYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLF 606

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYV 538
            +M T+ +R D +T    +  C    ++ +       +M+S + +       + ++D   
Sbjct: 607 EYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFF-NSMESTYGITPLAEHYTCLIDGLG 665

Query: 539 KCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLA-LSIYHQMRLSGVVPDEFTF 596
           + G +V+ +++ +++P  DD + W  +++ C  +   +L   +  H  RL    P  +  
Sbjct: 666 RAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVL 725

Query: 597 AILVKAS 603
              + AS
Sbjct: 726 LSNIYAS 732



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 36/355 (10%)

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            L +G  +   + N L+ +YS  G  C            LRA  SLP             
Sbjct: 34  VLAAGLGADTFLINRLVELYSVSGLPC----------DALRAFRSLPR------------ 71

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                  +++   A +    R G +  A  L +     ++ +WN +I     S  + +AL
Sbjct: 72  ------PNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEAL 125

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           EL+  M   G      T+A+ + ACG +  L  G++ H  A+K G + +L V + +L MY
Sbjct: 126 ELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMY 185

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG + DA  +F+ + +P++V++T M+ G V  G  D AL ++ +M  SGV  D    +
Sbjct: 186 TKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVS 245

Query: 598 ILVK--ASSC------LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            ++   A +C      + A   G+ IHA +++    SD  VG SL+DMY KC  +++A  
Sbjct: 246 SVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVK 305

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           +F  +   +TV WN ++ G  Q G+  + L++   M+  G EP+ VT+  +L++C
Sbjct: 306 VFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASC 360



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 93/193 (48%), Gaps = 19/193 (9%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           + S + S++      S +  G+  HA+I+      + ++ + L+ MY++CG++  AR  F
Sbjct: 516 TESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFF 575

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D M  +++++WN ++  YA +G G      +   LF  +  +      +T   +L  C  
Sbjct: 576 DCMVTKNIVAWNEMIHGYAQNGFGE-----KAVDLFEYMLTTEQRPDGVTFIAVLTGCSH 630

Query: 172 SGYVWAS-------ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ER 223
           SG V  +       E+ +G    I  + + +    L++   + G++ E + L D M  + 
Sbjct: 631 SGLVDEAIAFFNSMESTYG----ITPLAEHYT--CLIDGLGRAGRLVEVEALIDNMPCKD 684

Query: 224 DVVLWKVMLRAYA 236
           D ++W+V+L A A
Sbjct: 685 DPIVWEVLLAACA 697



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 36/228 (15%)

Query: 626 SDPFVGISLVDMYA-------------------------------KCGNIEDAYILFKQM 654
           +D F+   LV++Y+                               + G+++ A  L  +M
Sbjct: 41  ADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEM 100

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
             RN V WN ++  LA+     E L+L+E M   G+ P   T   VLSAC     + +  
Sbjct: 101 PDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDG- 159

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM--PFEAS-ASMHRALLGA 771
              H +  K G++  +   + L+    + G  ++A  L   M  P E S  +M   L+ A
Sbjct: 160 RRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQA 219

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
             V         +    + ++P   S+ VL S   A A+++D V + R
Sbjct: 220 GSVDDALRLFARMCRSGVRVDPVAVSS-VLGSCAQACASEFDVVRAFR 266


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 196/591 (33%), Positives = 303/591 (51%), Gaps = 50/591 (8%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I ++S M    G+R +     S+L++    P  L L KQIH H I+    A+  V TA+ 
Sbjct: 173 IRLFSDMQ-ASGIRPNSAVYMSLLQSCLG-PSFLELGKQIHSHVIRAQLNANITVETAIC 230

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           ++Y R G +  A+ +F+  D  +  TW  ++ GY  +     ALELF+ M   G  LDE 
Sbjct: 231 NMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEF 290

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
             +  +K C  L     G+Q+H++ +K G E ++ V + ++D YVKCG +  A   F  I
Sbjct: 291 VFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
             P+DV+W+ +ISG   +G  +  + I+  +R  GVV + F +  + +A +    L  G 
Sbjct: 351 SEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGS 410

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q H + IK    S  +   ++V MY+KCG ++ A   F+ +D  + V W A++ G A HG
Sbjct: 411 QAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHG 470

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           N  E L  F  M+++GV P++VTFI VL+ACS++GLV+EA +    M   YG++P ++HY
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY 530

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             ++D   RAG  +EA ELI  MPFE  A   ++LLG C    D + GK  AE L  L+P
Sbjct: 531 DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDP 590

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGG-YV 852
            D++ Y+LL N+++A  +W++    R  M  + +KK+     +  V+G + R   G  + 
Sbjct: 591 GDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKE-VSCSWISVKGQVHRFVVGDRHH 649

Query: 853 PDTDFVLLDVEE--------------EE---------KERALYYHSEKLARAYGLISTPP 889
           P T+ +   +EE              EE         ++  L  HSEKLA A+GLIST  
Sbjct: 650 PQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTED 709

Query: 890 SSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           ++ IL  K                           + RFHH + G C C D
Sbjct: 710 NAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCND 760



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 158/278 (56%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +   L+ +YC  GS  + + +F+     +L +W  +I  Y  +    KA+ LFS M  SG
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R +     + +++C     L+ GKQ+H++ +++    ++ V + I +MYV+CG +  A+
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ + A + V WT ++ G     + ++AL ++ +M + GV  DEF F+I++K    L 
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLE 303

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
             + GRQIH++++KL   S+  VG  LVD Y KCG+IE AY  F ++   N V W+A++ 
Sbjct: 304 DWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           G +Q G  E+ +K+F  +++ GV  +S  +  V  AC+
Sbjct: 364 GFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA 401



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 219/536 (40%), Gaps = 111/536 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H R+  + + P   + N L+ MY  CGS +  +++FD+M  ++L+SW  +++AYA 
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAK 165

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +GE     + +  RLF  ++ S    +      LL+ CL   ++   + +H + ++  L 
Sbjct: 166 NGE-----LEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLN 220

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V  A+ N+Y + G +  AK +FDGM  ++ V W  ++  Y +    E    LF  +
Sbjct: 221 ANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARM 280

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS----------- 295
              G+  D+     VL V       D+G+    Q+ ++ +KL   +  S           
Sbjct: 281 AMEGVELDEFVFSIVLKVCCGLEDWDMGR----QIHSHIVKLGAESEVSVGTPLVDFYVK 336

Query: 296 -----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            N V W+  +SG+ Q G     I+ F ++    V  +S  +   
Sbjct: 337 CGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSV 396

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
             A A   NLN+G Q HG  +K G  S +   ++++ MYSK G           L    R
Sbjct: 397 FQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCG----------RLDYARR 446

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A  S+ E                   D+   TA+I  Y  +G+ AE              
Sbjct: 447 AFESIDE------------------PDAVAWTAIISGYAYHGNAAE-------------- 474

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM---- 514
                            AL  F  M + G R + +T    + AC    ++ + KQ     
Sbjct: 475 -----------------ALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSM 517

Query: 515 -HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              Y +K   +   C    ++D Y + G + +A  + N +P  PD ++W +++ GC
Sbjct: 518 SRDYGVKPTIDHYDC----MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGC 569



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D  +G+  H+ I+      +  +   L+  Y +CG +  A R F ++ + +
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            +SW+++++ ++ SG      + +  ++F SLR      +      + + C +   +   
Sbjct: 355 DVSWSALISGFSQSGR-----LEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMG 409

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
              HG A+K GLV   +   A+V +YSK G++  A+  F+ + E D V W  ++  YA +
Sbjct: 410 SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYH 469

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           G   E    F  +   G+ P+  +   VL   S  G
Sbjct: 470 GNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 148/360 (41%), Gaps = 35/360 (9%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S+ + S+L+  +  S L LGK  H+ ++ +    +  +   +  MY RCG L  A+ +F
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF 246

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D M  ++ ++W  ++  Y       A+ +     LF  +            + +LK+C  
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQ-----AKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                    +H + +K+G   +  V   LV+ Y K G I  A   F  + E + V W  +
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDD---ESV--QCVLGVISDLGKR-HEEQVQA-- 283
           +  ++++G  E+   +F  L   G+  +     SV   C      ++G + H + ++   
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421

Query: 284 ---------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                                YA +     +  + V W   +SGY   G+   A+  F  
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS-GFYSAVIVGNSLINMYSKMG 381
           M    V+ ++VTF+  L A + +  +   +Q  G+  +  G    +   + +I+ YS+ G
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 15/181 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ +   + ++L +G   H   +    +   +  + ++TMYS+CG L YARR F+ + + 
Sbjct: 395 SVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEP 454

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ++W +I++ YA+ G     N  E    FR ++      + +T   +L  C  SG V  
Sbjct: 455 DAVAWTAIISGYAYHG-----NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAE 509

Query: 178 SETVHG-----YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
           ++   G     Y +K  +  D +    +++ YS+ G ++EA  L + M  E D + WK +
Sbjct: 510 AKQYLGSMSRDYGVKPTI--DHY--DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSL 565

Query: 232 L 232
           L
Sbjct: 566 L 566



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 60/110 (54%)

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           ++  L +A   L +L  GR IH  L +   +    +   L+ MY  CG+  D   +F +M
Sbjct: 89  SYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEM 148

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            M+N V W  ++   A++G  E+ ++LF DM+A G+ P+S  ++ +L +C
Sbjct: 149 LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC 198


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 192/576 (33%), Positives = 299/576 (51%), Gaps = 48/576 (8%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           ++ +  AS+L +  S  + L   KQ+H    +     +  ++T L++ Y    S+  A +
Sbjct: 56  SNHYYYASLLESCIS-AKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LF+     +L  WN +I  Y  +     A+ L+  M   G + D  T+   +KAC  L  
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           + +G+ +H   ++SG+E D+ V + ++DMY KCG +VDA+ +F+ I   D V W +M++ 
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAA 234

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              NG  D +LS+  +M   GV P E T   ++ +S+ +  L  GR+IH    +     +
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             V  +L+DMYAKCG+++ A +LF+++  +  V WNA++ G A HG   E L LFE M  
Sbjct: 295 DKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK 354

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
              +PD +TF+G L+ACS   L+ E    ++LM     I P VEHY+ +VD LG  G+  
Sbjct: 355 EA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD 413

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA +LI  M     + +  ALL +C+  G+ E  +   EKL+ LEP DS  YV+L+N++A
Sbjct: 414 EAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYA 473

Query: 808 AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
            + +W+ V   R  M  K +KK+ A                         I+A+++ L  
Sbjct: 474 QSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEG 533

Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK-----EP 899
            ++E GYVPDT  V  DVEE+EK   +  HSE+LA A+GLIST P + +L  K     E 
Sbjct: 534 LMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICED 593

Query: 900 LY------------------ANRFHHLRDGMCPCAD 917
            +                   NR+HH R G+C C D
Sbjct: 594 CHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGD 629



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 162/312 (51%), Gaps = 8/312 (2%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           GL+ D FTL  VL+A S+L   +   + IH   I++    D FV  AL+D+Y + G + +
Sbjct: 154 GLKPDNFTLPFVLKACSAL-STIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVD 212

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A ++F+     D   WN+M+  Y  + +  ++L L   M   G R  E T+ T + +   
Sbjct: 213 ARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSAD 272

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           +  L  G+++H +  + GF+ +  V + ++DMY KCG++  A  +F  +     V+W  +
Sbjct: 273 IACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAI 332

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G   +G    AL ++ +M +    PD  TF   + A S    L++GR ++ NL+  DC
Sbjct: 333 ITGYAMHGLAVEALDLFERM-MKEAQPDHITFVGALAACSRGRLLDEGRALY-NLMVRDC 390

Query: 625 SSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD-MRNTVLWNAMLVGLAQHGNGEETLKL 681
             +P V     +VD+   CG +++AY L +QMD M ++ +W A+L     HGN E     
Sbjct: 391 RINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVA 450

Query: 682 FEDMKAHGVEPD 693
            E +    +EPD
Sbjct: 451 LEKLIE--LEPD 460



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 166/358 (46%), Gaps = 36/358 (10%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWF-SILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           SF+  L+P  +   F SS S+  ++ S+L   IS   L  GK  HAR+       +  L 
Sbjct: 37  SFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLA 96

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
             L+  YS C SL  A  LFDK+P  +L  WN ++ AYA +G            L+  + 
Sbjct: 97  TKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHET-----AISLYHQML 151

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E        TL  +LK C +   +     +H   ++ G   D FV  ALV++Y+K G + 
Sbjct: 152 EYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVV 211

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           +A+ +FD + +RD VLW  ML AYA+NG  +E   L  ++   G+ P + ++  V+   +
Sbjct: 212 DARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSA 271

Query: 272 DL------------GKRHEEQ---------VQAYA------IKLLLYN--NNSNVVLWNK 302
           D+            G RH  Q         +  YA      +  +L+       VV WN 
Sbjct: 272 DIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNA 331

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
            ++GY   G    A++ F  M++   Q D +TF+ ALAA +    L+ G+ ++   ++
Sbjct: 332 IITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVR 388



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 146/331 (44%), Gaps = 55/331 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+ LWN  +  Y   G +  AI  +  M+   ++ D+ T    L A +    +  G+ IH
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVC------------------------------- 384
              ++SG+   V VG +L++MY+K GCV                                
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPD 242

Query: 385 ------------GLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVS 429
                       G+R  + TL +V+ +S+    LP G    ++IH    ++    +  V 
Sbjct: 243 ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHG----REIHGFGWRHGFQYNDKVK 298

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           TALID+Y + GS+  A  LFE      + +WNA+I GY +   + +AL+LF  M    + 
Sbjct: 299 TALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQP 358

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQ 547
            D IT   A+ AC    +L +G+ ++   ++    ++  V   + ++D+   CG + +A 
Sbjct: 359 -DHITFVGALAACSRGRLLDEGRALYNLMVRD-CRINPTVEHYTCMVDLLGHCGQLDEAY 416

Query: 548 SIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
            +   +   PD   W  +++ C  +G  +LA
Sbjct: 417 DLIRQMDVMPDSGVWGALLNSCKTHGNVELA 447


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 229/831 (27%), Positives = 371/831 (44%), Gaps = 183/831 (22%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P+   +N  +T + R G +  A RLF  MP R   ++N++LA Y+ +G            
Sbjct: 36  PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG------------ 83

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
                        RL LA  L   +                      D +    L++  +
Sbjct: 84  -------------RLPLAASLFRAIPRP-------------------DNYSYNTLLHALA 111

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
               + +A+ LFD M  RD V + VM+ ++A +G      H F       L P+ ++V  
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF------DLAPEKDAVS- 164

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                             WN  L+ Y++    +G +E    +  
Sbjct: 165 ----------------------------------WNGMLAAYVR----NGRVEEARGLFN 186

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S  ++D +++   ++       ++  +++            V+  N +++ Y++ G +  
Sbjct: 187 SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRD----VVSWNIMVSGYARRGDMVE 242

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R          R   + P                  V D F  TA++  Y +NG + EA
Sbjct: 243 AR----------RLFDAAP------------------VRDVFTWTAVVSGYAQNGMLEEA 274

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     +  +WNAM+  YI      +A ELF+ M                      
Sbjct: 275 RRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR------------------- 315

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
                               ++   + +L  Y + G + +A+++F+ +P  D V+W  M+
Sbjct: 316 --------------------NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +     G  +  L ++ +M   G   +   FA ++   + + ALE G Q+H  LI+    
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
              FVG +L+ MY KCGN+EDA   F++M+ R+ V WN M+ G A+HG G+E L++F+ M
Sbjct: 416 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 475

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +    +PD +T +GVL+ACS++GLV +    F+ M   +G+  + EHY+ ++D LGRAGR
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGR 535

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA +L+  MPFE  ++M  ALLGA R+  + E G+  AEK+  LEP ++  YVLLSNI
Sbjct: 536 LAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNI 595

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +A++ +W D    R  M+ + VKK P                        + I+A +E L
Sbjct: 596 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
             R+K+ GYV  TD VL DVEEEEKE  L YHSEKLA AYG+++ PP   I
Sbjct: 656 DMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPI 706



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 222/522 (42%), Gaps = 78/522 (14%)

Query: 57  FSILRHAISTSDLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           ++ L HA++ S  L      AR + +   + D    N +++ ++  G +  AR  FD  P
Sbjct: 103 YNTLLHALAVSSSL----ADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           ++D +SWN +LAAY  +G      V E   LF S  E    +            L SGYV
Sbjct: 159 EKDAVSWNGMLAAYVRNGR-----VEEARGLFNSRTEWDVISWN---------ALMSGYV 204

Query: 176 -W-----ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            W     A E       +  + W+  VSG     Y++ G + EA+ LFD    RDV  W 
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSG-----YARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
            ++  YA+NG  EE   +F  +      P+  +V     V + + +R  ++ +    +L 
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAK----ELF 309

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
                 NV  WN  L+GY Q G    A   F  M     Q D+V++   LAA        
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM----PQKDAVSWAAMLAA-------- 357

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
                         YS        + ++ +MG  CG   ++   A VL   + +   L  
Sbjct: 358 --------------YSQGGCSEETLQLFIEMG-RCGEWVNRSAFACVLSTCADI-AALEC 401

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
             Q+H   I+       FV  AL+ +Y + G+M +A   FE  +  D+ +WN MI GY  
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFE 524
                +ALE+F  M T+  + D+IT+   + AC    ++++G        H + + +  E
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE 521

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
              C    ++D+  + G + +A  +  D+P  PD   W  ++
Sbjct: 522 HYTC----MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 9/197 (4%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F++        + S +  +L      + L  G   H R++ +      F+ N L+ MY +
Sbjct: 371 FIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFK 430

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG++  AR  F++M +RD++SWN+++A YA  G G      E   +F  +R + T    +
Sbjct: 431 CGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK-----EALEIFDMMRTTSTKPDDI 485

Query: 161 TLAPLLKLCLSSGYVWASETVHGYAL--KIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           TL  +L  C  SG V      + Y++    G+         ++++  + G++ EA  L  
Sbjct: 486 TLVGVLAACSHSGLV-EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 544

Query: 219 GMQ-ERDVVLWKVMLRA 234
            M  E D  +W  +L A
Sbjct: 545 DMPFEPDSTMWGALLGA 561



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 113/302 (37%), Gaps = 63/302 (20%)

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            E ++  S+  +  +++ G + DA+ +F  +P      +  M++G   NG   LA S++ 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQI------------------HAN------ 618
            +      PD +++  L+ A +  ++L   R +                  HAN      
Sbjct: 94  AI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 619 ---LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
                 L    D      ++  Y + G +E+A  LF      + + WNA++ G  Q G  
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209

Query: 676 EETLKLFEDMKAHGV-------------------------EP--DSVTFIGVLSACSYTG 708
            E  +LF+ M    V                          P  D  T+  V+S  +  G
Sbjct: 210 SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           ++ EA   F  M E+  +      ++ +V A  +     EA EL   MP    AS +  L
Sbjct: 270 MLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTML 324

Query: 769 LG 770
            G
Sbjct: 325 TG 326


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 218/730 (29%), Positives = 349/730 (47%), Gaps = 105/730 (14%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A +LL      N V +N  +  Y + G    ++E      R+ V  D  ++  ALAA + 
Sbjct: 62  ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSR 121

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------- 384
             +L  G+ +H   +  G  S V V NSL++MYSK G +                     
Sbjct: 122 AGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSL 181

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEG-LHLSKQIHVHAIKN 420
                                  G+  + F L SV++  S   +G + +++ +H   IK 
Sbjct: 182 VSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKA 241

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN------SH 474
              +D F+ +A+ID+Y + G++ EA  LF +    ++  +N MI G+  +        + 
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL L+S + + G +  E T ++ ++AC     L+ GKQ+H   +K  F+ D  + S ++
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           D+Y   G M D    F   P  D V WT M+SGCV N   + ALS++H+   +G+ PD F
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T + ++ A + L     G QI     K        +G S V MYA+ G+++ A   F++M
Sbjct: 422 TISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM 481

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
           +  + V W+A++   AQHG   + L  F++M    V P+ +TF+GVL+ACS+ GLV E  
Sbjct: 482 ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGL 541

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             +  M + YG+ P ++H + +VD LGRAGR  +A   I +  F A   + R+LL +CR+
Sbjct: 542 RYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRI 601

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
             D E G+ VA ++M LEP  S++YV+L N++  A +    +  R  MK++ VKK+P   
Sbjct: 602 HRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLS 661

Query: 832 --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                               +  I+ K+E ++ RI++            D E  ++E+ L
Sbjct: 662 WIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK--------LATTDTEISKREQNL 713

Query: 872 Y-YHSEKLARAYGLISTPPSSVIL---------------------SNKEPLYAN--RFHH 907
              HSEKLA A G+I  P S+ I                       N+E +  +  RFHH
Sbjct: 714 MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHH 773

Query: 908 LRDGMCPCAD 917
            RDG C CAD
Sbjct: 774 FRDGSCSCAD 783



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 237/562 (42%), Gaps = 88/562 (15%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FL N L+  Y R G  + ARRL D+MP R+ +S+N ++ AY+  G       T    L R
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLET----LAR 99

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
           + R  +    R + A  L  C  +G++ A   VH  A+  GL    FVS +LV++YSK G
Sbjct: 100 ARRAGVD-VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           ++ EA+ +FD  +ERD V W  ++  Y   G  EE+  +F  + R G+  +  ++  V+ 
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 269 VISDLGKRHEEQVQA-----------------------YAIK--------LLLYNNNSNV 297
             S  G    +  +A                       YA K        L       NV
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278

Query: 298 VLWNKKLSGYLQVGDNHG------AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           V++N  ++G+ +     G      A+  +  +    +Q    TF   L A      L  G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
           +QIHG  +K  F     +G++LI++Y   GC+                            
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398

Query: 384 ---------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           GL+ D FT++SV+ A +SL       +QI   A K+     + +
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA-RAGEQIQCFATKSGFDRFTVM 457

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             + + +Y R+G +  A   F+  +  D+ +W+A+I  +     +  AL  F  M  +  
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQ 547
             +EIT    + AC    ++ +G + +    K  G    +   + ++D+  + G + DA+
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577

Query: 548 S-IFNDIPAPDDVAWTTMISGC 568
           + I N I   D V W ++++ C
Sbjct: 578 AFISNSIFHADPVIWRSLLASC 599



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 9/342 (2%)

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           A  F+   L+  YCR G    A  L +     +  ++N +I  Y     +  +LE  +  
Sbjct: 41  ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             +G  +D  + A A+ AC     L+ G+ +HA A+  G    + VS+ ++ MY KCG M
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            +A+ +F+     DDV+W +++SG V  G  +  + ++  MR  G+  + F    ++K  
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220

Query: 604 SCL--TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           S      ++    +H  +IK    SD F+  +++DMYAK G + +A  LF+ +   N V+
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 662 WNAMLVGLAQHGN------GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
           +N M+ G  +           E L L+ ++++ G++P   TF  VL AC+  G + E  +
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYL-EFGK 339

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
             H    KY  + +    S L+D    +G  ++      S P
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP 381



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 10/229 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR       L  GK  H +++  +   D F+ + L+ +Y   G +    R F   P  
Sbjct: 324 SVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKH 383

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+++W +++     SG    E   +   LF     +       T++ ++  C S     A
Sbjct: 384 DIVTWTAMV-----SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARA 438

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +  +A K G      +  + V++Y++ G +  A   F  M+  DVV W  ++  +A+
Sbjct: 439 GEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ 498

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDES-----VQCVLGVISDLGKRHEEQV 281
           +G   +  H F ++  + + P++ +       C  G + D G R+ E +
Sbjct: 499 HGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 299/581 (51%), Gaps = 83/581 (14%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G    ++T+ S+L AS+ L + L   KQIH   I  + + + F+  AL D+Y + G + +
Sbjct: 150 GFEPTEYTIVSILNASAQLLD-LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQ 208

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A +LF+     +L +WN MI GY  +    K + L   M  SG   D++T++T + A   
Sbjct: 209 ARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--- 265

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
                                           Y +CG + +A+ +F++    D V WT M
Sbjct: 266 --------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAM 293

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           + G   NG E+ AL ++++M L  + PD +T + +V + + L +L  G+ +H   I    
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           +++  V  +L+DMY+KCG I+DA  +F  M  RN V WNAM+VG AQ+G+ ++ L+LFE+
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M     +PD+VTFIG+LSAC +   + +  E F  +  ++G+ P ++HY+ +V+ LGR G
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R ++A  LI +M  +    +   LL  C  +GD    +  A  L  L+P  +  Y++LSN
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533

Query: 805 IFAAANQWDDVTSARGEMKRKNVKK-----------------------DPADLIFAKVEG 841
           ++A+  +W DV S R  MK KNVKK                         ++ I+ K+  
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP------------ 889
           LI +++E G+ P+T+ VL DV E+EK +++ +HSEKLA A+GLI  P             
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653

Query: 890 -----------SSVILSNKEPLY-ANRFHHLRDGMCPCADN 918
                      +S I+  +  L  +NRFHH   G C C DN
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDN 694



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 164/355 (46%), Gaps = 36/355 (10%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           D F   AL+  Y ++GS+   +  F+     D  ++N  I G+  ++   ++LELF  M 
Sbjct: 88  DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G    E TI + + A   LL L+ GKQ+H   +   F  ++ + + + DMY KCG + 
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A+ +F+ +   + V+W  MISG   NG+ +  + + HQMRLSG +PD+ T + ++ A  
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
                                            Y +CG +++A  +F +   ++ V W A
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTA 292

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           M+VG A++G  E+ L LF +M    +EPDS T   V+S+C+    +    +  H      
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-QAVHGKSILA 351

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           G+   +   S L+D   + G   +A  +   MP     S +  ++G  +   D +
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKD 406



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 179/367 (48%), Gaps = 33/367 (8%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYA 107
           S+++S  +  ++   + T+++   K   + + +   Q  D FL N L+ +Y++ G L  A
Sbjct: 18  STATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDA 77

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSG---------------EGNAENVT----------- 141
           + LFDKM  RD  SWN++L+AYA SG               +  + N T           
Sbjct: 78  QNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ 137

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E   LF+ ++      +  T+  +L        +   + +HG  +    + + F+  AL 
Sbjct: 138 ESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALT 197

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y+K G+I +A++LFD + ++++V W +M+  YA+NG  E+   L   +  SG  PD  
Sbjct: 198 DMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQV 257

Query: 262 SVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
           ++  ++      G+  E      A ++       ++V W   + GY + G    A+  F 
Sbjct: 258 TMSTIIAAYCQCGRVDE------ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFN 311

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M+  +++ DS T    +++ A   +L+ GQ +HG ++ +G  + ++V ++LI+MYSK G
Sbjct: 312 EMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCG 371

Query: 382 CVCGLRT 388
            +   R+
Sbjct: 372 FIDDARS 378



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 37/284 (13%)

Query: 508 LKQGKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGAMVDAQSIFND-------------- 552
           + Q K++ ++     F+  D  + + +L +Y K G + DAQ++F+               
Sbjct: 38  INQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLS 97

Query: 553 -----------------IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
                            +P  D V++ T I+G   N     +L ++ +M+  G  P E+T
Sbjct: 98  AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYT 157

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
              ++ AS+ L  L  G+QIH ++I  +   + F+  +L DMYAKCG IE A  LF  + 
Sbjct: 158 IVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLT 217

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            +N V WN M+ G A++G  E+ + L   M+  G  PD VT   +++A    G V EA  
Sbjct: 218 KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARR 277

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            F   +EK     ++  ++ ++    + GR ++A  L   M  E
Sbjct: 278 VFSEFKEK-----DIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 154/373 (41%), Gaps = 78/373 (20%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P  SL L   +Q+  F  +  +    SIL  +    DL  GK  H  I+  + + + F+ 
Sbjct: 136 PQESLELFKRMQREGFEPTEYTI--VSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIW 193

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L  MY++CG +  AR LFD +  ++L+SWN +++ YA +G+       +   L   +R
Sbjct: 194 NALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE-----KCIGLLHQMR 248

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
            S                                   G + D+     ++  Y + G++ 
Sbjct: 249 LS-----------------------------------GHMPDQVTMSTIIAAYCQCGRVD 273

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +F   +E+D+V W  M+  YA+NG  E+   LF ++    + PD  ++  V+   +
Sbjct: 274 EARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCA 333

Query: 272 DLGKRHEEQ-VQAYAIKLLLYNN----------------------------NSNVVLWNK 302
            L   H  Q V   +I   L NN                              NVV WN 
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------H 355
            + G  Q G +  A+E F NM++   + D+VTF+  L+A    + +  GQ+        H
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQH 453

Query: 356 GTTLKSGFYSAVI 368
           G T     Y+ ++
Sbjct: 454 GMTPTLDHYACMV 466



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHAN 618
           A+T ++  CV   E + A  +   M      P D F    L+   +    L   + +   
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           ++K     D F   +L+  YAK G+I++    F +M  R++V +N  + G + +   +E+
Sbjct: 84  MLK----RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSA 703
           L+LF+ M+  G EP   T + +L+A
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNA 164


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 193/572 (33%), Positives = 307/572 (53%), Gaps = 58/572 (10%)

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           L  S SLP+GL    Q+H H IK        +S  LI+ Y +      +  +F +     
Sbjct: 30  LTFSRSLPKGL----QLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKS 85

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
             TW+++I  +  ++    +L  F  M   G   D+    +A K+CG L  L   K +H 
Sbjct: 86  ATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHC 145

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           +A+K+ + LD+ V S ++DMY KCG +  A ++F+++P  + V+W+ +I G V  GE+D 
Sbjct: 146 FALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDE 205

Query: 577 ALSIYHQMRLS----GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           +L ++ +  +     GV  ++FT + +++     T L+ GR IH    K    S  FV  
Sbjct: 206 SLRLFKRFLVEEENEGV--NDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVAS 263

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVE 691
           SL+ +Y+KCG +E+AY +F+++ +RN  +WNAML+  AQH + ++T +LF+ MK+  G++
Sbjct: 264 SLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMK 323

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
            + +TF+ VL ACS+ GLV +    F LM++ YGIEP  +HYS +VD LGRAG+  +A +
Sbjct: 324 ANFITFLCVLYACSHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDAVK 382

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           LI  MP E + S+  ALL  CR+ G+T+   +VA+++  L    S  +V+LSN +AAA +
Sbjct: 383 LIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGR 442

Query: 812 WDDVTSARGEMKRKNVKKD-----------------------PADLIFAKVEGLIKRIKE 848
           W++   AR  M+ + +KK+                        +  I+ K++ L + + +
Sbjct: 443 WEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDK 502

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA------ 902
            GYV DT FVL +V+ EEK R++ YHSE+LA A+G I+ P    I   K           
Sbjct: 503 AGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTA 562

Query: 903 -----------------NRFHHLRDGMCPCAD 917
                            NRFH   DG C C D
Sbjct: 563 IKFISKCTGRVIIVRDNNRFHRFEDGKCTCGD 594



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 120/229 (52%), Gaps = 13/229 (5%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S L + K  H   L ++   D F+ ++++ MY++CG + YA  +FD+MP R+++SW+ ++
Sbjct: 135 SSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLI 194

Query: 127 AAYAHSGEGNAENVTEGFRLFRS--LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
             Y   GE +     E  RLF+   + E     +  TL+ +L++C  S  +     +HG 
Sbjct: 195 YGYVQLGEDD-----ESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGL 249

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           + K       FV+ +L+++YSK G + EA  +F+ +  R++ +W  ML A A++   ++ 
Sbjct: 250 SFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKT 309

Query: 245 FHLFVDLHR-SGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK 287
           F LF  +    G+  +  +  CVL   S     + GK + E ++ Y I+
Sbjct: 310 FELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIE 358



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 52/327 (15%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W+  +S + Q      ++  F  M+R  V  D   F  A  +     +L + + +H   L
Sbjct: 89  WSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFAL 148

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVC--------------------------------GLR 387
           K+ ++  + VG+S+I+MY+K G +C                                 LR
Sbjct: 149 KTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLR 208

Query: 388 -------------TDQFTLASVLR--ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                         + FTL+SVLR    S+L   L + + IH  + K    +  FV+++L
Sbjct: 209 LFKRFLVEEENEGVNDFTLSSVLRVCGGSTL---LQMGRLIHGLSFKTSFDSSCFVASSL 265

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLD 491
           I +Y + G + EA  +FE     +L  WNAM+       ++ K  ELF  M +  G + +
Sbjct: 266 ISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKAN 325

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            IT    + AC    ++++GK         G E      S ++D+  + G + DA  +  
Sbjct: 326 FITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIE 385

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLA 577
           ++P  P +  W  +++GC  +G   LA
Sbjct: 386 EMPMEPTESVWGALLTGCRLHGNTKLA 412



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 35/236 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H + +K+GL     +S  L+N YSK      +  +F     +    W  ++ ++A+N  
Sbjct: 42  LHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDL 101

Query: 241 GEEVFHLFVDLHRSGLCPDDE---SVQCVLGVISDLGKRHEEQVQAYAIKL--------- 288
                + F  + R G+ PDD    S     G++S L     + +  +A+K          
Sbjct: 102 PLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPV--AKMLHCFALKTAYHLDIFVG 159

Query: 289 ------------LLYNNN-------SNVVLWNKKLSGYLQVGDNHGAIECFVNMI--RSN 327
                       + Y +N        NVV W+  + GY+Q+G++  ++  F   +    N
Sbjct: 160 SSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEEN 219

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              +  T    L    G+  L +G+ IHG + K+ F S+  V +SLI++YSK G V
Sbjct: 220 EGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVV 275



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   HA I+         L+++L+  YS+      + ++F   P +   +W+S+++++A 
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +           FRL   LR+ +     +      K C     +  ++ +H +ALK    
Sbjct: 99  NDLPLLS--LNYFRLM--LRQGVPPDDHI-FPSATKSCGILSSLPVAKMLHCFALKTAYH 153

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            D FV  +++++Y+K G I  A  +FD M  R+VV W  ++  Y + G  +E   LF
Sbjct: 154 LDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLF 210


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 198/588 (33%), Positives = 314/588 (53%), Gaps = 58/588 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G   D FTL+ ++ A     + + L KQ+H  A+     + S V+ A +  Y + G + E
Sbjct: 135 GFEVDGFTLSGLIAACC---DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLRE 191

Query: 445 AEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           A  +F   DG  D  +WN+MI  Y       KAL L+  M   G ++D  T+A+ + A  
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA---MVDAQSIFNDIPAPDDVA 560
            L  L  G+Q H   +K+GF  +  V SG++D Y KCG    M D++ +F +I +PD V 
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVL 311

Query: 561 WTTMISGCVDNGEE-DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           W TMISG   N E  + A+  + QM+  G  PD+ +F  +  A S L++  QG+QIH   
Sbjct: 312 WNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLA 371

Query: 620 IKLDCSSDPF-VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           IK +  S+   V  +L+ +Y K GN+ DA  +F +M   N V +N M+ G AQHG+G E 
Sbjct: 372 IKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L+L++ M   G+ P+++TF+ +LSAC++ G V E  + F+ M+E + IEPE EHYS ++D
Sbjct: 432 LRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMID 491

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            LGRAG+ +EA   I +MP++  +    ALLGACR   +    +  A++LM ++P  ++ 
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATP 551

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------DLIFAK----------- 838
           YV+L+N++A A +W+++ S R  M+ K ++K P            +F             
Sbjct: 552 YVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREV 611

Query: 839 ---VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA---LYYHSEKLARAYGLISTPPSSV 892
              +E ++K++K+ GYV D  + ++  +E  +      L +HSEKLA A+GL+ST     
Sbjct: 612 NEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEE 671

Query: 893 I---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           I                     ++ +E +  +  RFH  +DG C C D
Sbjct: 672 IVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD 719



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 176/372 (47%), Gaps = 36/372 (9%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           L +VA  D L  G+ +H   +KS   S+  + N  +N+YSK GC+           S  R
Sbjct: 16  LKSVAERD-LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCL-----------SYAR 63

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A                 A  +    + F    ++  Y ++  +  A  LF+     D  
Sbjct: 64  A-----------------AFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTV 106

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           ++N +I GY  +  +  A+ LF  M   G  +D  T++  + AC   + L   KQ+H +A
Sbjct: 107 SYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFA 164

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           +  GF+    V++  +  Y K G + +A S+F  +    D+V+W +MI     + E   A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKA 224

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L++Y +M   G   D FT A ++ A + L  L  GRQ H  LIK     +  VG  L+D 
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDF 284

Query: 638 YAKCG---NIEDAYILFKQMDMRNTVLWNAMLVGLAQH-GNGEETLKLFEDMKAHGVEPD 693
           Y+KCG    + D+  +F+++   + VLWN M+ G + +  + EE +K F  M+  G  PD
Sbjct: 285 YSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPD 344

Query: 694 SVTFIGVLSACS 705
             +F+ V SACS
Sbjct: 345 DCSFVCVTSACS 356



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 229/587 (39%), Gaps = 134/587 (22%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L  +++  DL  GKS HA  + S      +L+N+ + +YS+CG L YAR  FD   + +
Sbjct: 14  LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN 73

Query: 119 LISWNSILAAYAH--------------------------SGEGNAENVTEGFRLFRSLRE 152
           + S+N I+ AYA                           SG  +A        LF+ +RE
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRE 133

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                   TL+ L+  C     V   + +H +A+  G      V+ A V  YSK G +RE
Sbjct: 134 LGFEVDGFTLSGLIAACCDR--VDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLRE 191

Query: 213 AKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           A  +F GM   RD V W  M+ AY ++  G +   L+ ++   G   D  ++  VL  ++
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251

Query: 272 DL----GKRHEEQVQAYAIKLLLYNN-------------------------------NSN 296
            L    G R   Q     IK   + N                               + +
Sbjct: 252 SLDHLIGGR---QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPD 308

Query: 297 VVLWNKKLSGYLQVGDNHG--AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +VLWN  +SGY  + + H   A++ F  M R   + D  +F+   +A +   + + G+QI
Sbjct: 309 LVLWNTMISGY-SMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367

Query: 355 HGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           HG  +KS   S  I V N+LI++Y K G           L    R    +PE        
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSG----------NLLDARRVFDRMPE-------- 409

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                                                     +  ++N MI GY    + 
Sbjct: 410 -----------------------------------------LNAVSFNCMIKGYAQHGHG 428

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--S 531
            +AL L+  M  SG   + IT    + AC     + +G Q +   MK  F+++      S
Sbjct: 429 TEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG-QKYFNTMKETFKIEPEAEHYS 487

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            ++D+  + G + +A+   + +P  P  VAW  ++  C  +    LA
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 112/227 (49%), Gaps = 8/227 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDKM 114
           S+L    S   L+ G+  H +++ +    +  + + L+  YS+CG    +  + ++F ++
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEI 304

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
              DL+ WN++++ Y+     N E+  E  + FR ++         +   +   C +   
Sbjct: 305 LSPDLVLWNTMISGYSM----NEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360

Query: 175 VWASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
               + +HG A+K  +  +   V+ AL+++Y K G + +A+ +FD M E + V +  M++
Sbjct: 361 PSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIK 420

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            YA++G G E   L+  +  SG+ P++ +   +L   +  GK  E Q
Sbjct: 421 GYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQ 467


>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 230/785 (29%), Positives = 392/785 (49%), Gaps = 78/785 (9%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L   L+ +Y++ G+L Y  +LF +M  RD + WN +L+  A    G   +  E  RLFR+
Sbjct: 15  LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA----GFQSHEAEVMRLFRA 70

Query: 150 LRE-SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
           +   +    + +T+A +L +C +     A ++VH Y +K GL        AL+++Y+K G
Sbjct: 71  MHMVNEAKPNSVTIAIVLPVC-ARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCG 129

Query: 209 KI-REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
            +  +A   F+ ++ +DVV W  ++  ++EN F EE F LF  + +  + P+  ++  +L
Sbjct: 130 LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASIL 189

Query: 268 GVISDL----GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
            V + L    G R+ ++V  + ++ +    + +V+  N  +S YL++G    A   F NM
Sbjct: 190 PVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVI--NSLMSFYLRIGQMEKAEFLFRNM 247

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
              +        LV+  A+        G   +G  LK+            + ++S+   +
Sbjct: 248 KSRD--------LVSWNAIIA------GYASNGEWLKA------------LELFSEFISL 281

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSM 442
             ++ D  TL SVL A + +   L ++K IH + I++  +  D+ V  AL+  Y +    
Sbjct: 282 ETIKPDSVTLVSVLPACAHV-HNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYT 340

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             A   F      DL +WNA++  +  S      + L   M   G R D ITI T ++  
Sbjct: 341 QAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYY 400

Query: 503 GCLLMLKQGKQMHAYAMKSGF---ELDLCVSSGILDMYVKCGAMV--------------- 544
             +  +K+ K+ H+Y+++ G    +    + +G+LD Y KCG M                
Sbjct: 401 AAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNV 460

Query: 545 -----------------DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
                            DA +IFN +   D   W  M+    +N   D ALS++H+++  
Sbjct: 461 VTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQ 520

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+ PD  T   ++ A + + ++   RQ H  +I+  C +D  +  + +DMY+KCG++  A
Sbjct: 521 GMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGA 579

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
           Y LF     ++ V++ AM+ G A HG GEE L++F  M   GV+PD V    VL ACS+ 
Sbjct: 580 YKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHA 639

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV E ++ F+ + + +G +P +E Y+ +VD L R GR K+A   +  MP EA+A++   
Sbjct: 640 GLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGT 699

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LLGACR   + E G+ VA+ L  +E  +   YV++SN++AA  +WD V   R  M+ + +
Sbjct: 700 LLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTREL 759

Query: 828 KKDPA 832
           KK PA
Sbjct: 760 KK-PA 763



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 160/646 (24%), Positives = 292/646 (45%), Gaps = 82/646 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY-ARRLFDKMPDRDLISWNSILAAYA 130
           GKS H+ ++ S         N L++MY++CG +   A   F+++  +D++SWN+++A ++
Sbjct: 99  GKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFS 158

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS----SGYVWASETVHGYAL 186
            +     +   E F+LF ++ +     +  T+A +L +C S    +GY +  E VH + L
Sbjct: 159 EN-----KFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKE-VHCHVL 212

Query: 187 -KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG---FGE 242
            ++ LV D  V  +L++ Y + G++ +A+FLF  M+ RD+V W  ++  YA NG      
Sbjct: 213 RRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKAL 272

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLG-----------------VISDLGKRHEEQV---- 281
           E+F  F+ L    + PD  ++  VL                  +I   G R +  V    
Sbjct: 273 ELFSEFISLET--IKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNAL 330

Query: 282 ----------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                     QA A++  L  +  +++ WN  L  + + G     +     M+R  ++ D
Sbjct: 331 LSFYAKCNYTQA-ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPD 389

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY---SAVIVGNSLINMYSKMGCVCGLRT 388
           S+T L  +   A    +   ++ H  +++ G     +   +GN +++ Y+K G       
Sbjct: 390 SITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCG------- 442

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
               +   +    SL E             +N    +S +S      Y  + S  +A  +
Sbjct: 443 ---NMKYAVNIFGSLSEK------------RNVVTCNSMISG-----YVNSSSHDDAYAI 482

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F      DL TWN M+  Y  ++   +AL LF  +   G + D +TI + + AC  +  +
Sbjct: 483 FNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASV 542

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
              +Q H Y +++ F  D+ ++   +DMY KCG++  A  +F   P  D V +T M+ G 
Sbjct: 543 HMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGF 601

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +G  + AL I+  M   GV PD      ++ A S    +++G +I  ++ K+      
Sbjct: 602 AMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPT 661

Query: 629 FVGIS-LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
               + +VD+ A+ G I+DAY    +M +  N  +W  +L     H
Sbjct: 662 MEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTH 707



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 247/534 (46%), Gaps = 28/534 (5%)

Query: 72  GKSTHARILNSSQ-IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           GK  H  +L   + + D  + N+LM+ Y R G +  A  LF  M  RDL+SWN+I+A YA
Sbjct: 204 GKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA 263

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-IG 189
            +GE       E F  F SL E+I   S +TL  +L  C     +  ++ +HGY ++  G
Sbjct: 264 SNGEW--LKALELFSEFISL-ETIKPDS-VTLVSVLPACAHVHNLQVAKGIHGYIIRHPG 319

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D  V  AL++ Y+K    + A   F  +  +D++ W  +L A+ E+G    + +L  
Sbjct: 320 LREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLH 379

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
            + R G+ PD  ++  ++   + + + +  ++  +Y+I+  L   ++   L N  L  Y 
Sbjct: 380 WMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYA 439

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN----LNLGQQIHGTT--LKSG 362
           + G+   A+  F ++          + +      +  D+     N   +   TT  L   
Sbjct: 440 KCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVR 499

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
            Y+     +  ++++ ++    G++ D  T+ S+L A + +   +H+ +Q H + I+   
Sbjct: 500 VYAENDFPDQALSLFHELQGQ-GMKPDIVTIMSILPACAHMAS-VHMLRQCHGYVIR-AC 556

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             D  ++ A ID+Y + GS+  A  LF +    DL  + AM+ G+ +     +AL +FS+
Sbjct: 557 FNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSY 616

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
           M   G + D + I   + AC    ++ +G K  ++     GF+  +   + ++D+  + G
Sbjct: 617 MLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGG 676

Query: 542 AMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
            + DA +    +P   +   W T++  C            +H++ L  VV D  
Sbjct: 677 RIKDAYTFVTRMPIEANANIWGTLLGAC----------RTHHEVELGRVVADHL 720


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 176/575 (30%), Positives = 312/575 (54%), Gaps = 47/575 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D     SVL++ + + + L   + +H   ++     D +   AL+++Y +   +     +
Sbjct: 104 DHNVFPSVLKSCTMMMD-LRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKV 162

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE     D+ ++N +I GY  S     AL +   M TS  + D  T+++ +      + +
Sbjct: 163 FELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDV 222

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            +GK++H Y ++ G + D+ + S ++DMY K   + D++ +F+ +   D ++W ++++G 
Sbjct: 223 LKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGY 282

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V NG  + AL ++ QM  + V P    F+ ++ A + L  L  G+Q+H  +++     + 
Sbjct: 283 VQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNI 342

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
           F+  +LVDMY+KCGNI+ A  +F +M++ + V W A+++G A HG+G E + LFE+MK  
Sbjct: 343 FIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 402

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           GV+P+ V F+ VL+ACS+ GLV EA+  F+ M + YG+  E+EHY+ + D LGRAG+ +E
Sbjct: 403 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 462

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I  M  E + S+   LL +C V  + E  + VAEK+  ++  +  AYVL+ N++A+
Sbjct: 463 AYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYAS 522

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
             +W ++   R  +++K ++K PA                       D I   ++ ++++
Sbjct: 523 NGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQ 582

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------ 893
           +++ GYV DT  VL DV+EE K   L+ HSE+LA A+G+I+T P + I            
Sbjct: 583 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDC 642

Query: 894 ---------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                    ++ +E +  +  RFHH   G C C D
Sbjct: 643 HVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGD 677



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 184/362 (50%), Gaps = 4/362 (1%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +KQ+H   I+  +++ +  S  +I +Y     + EA  +F+  +   +  W ++I  +  
Sbjct: 24  AKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
            +   +AL  F  M  SG   D     + +K+C  ++ L+ G+ +H + ++ G + DL  
Sbjct: 83  QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            + +++MY K   +   + +F  +P  D V++ T+I+G   +G  + AL +  +M  S +
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
            PD FT + ++   S    + +G++IH  +I+    SD ++G SLVDMYAK   IED+  
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 262

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           +F  +  R+++ WN+++ G  Q+G   E L+LF  M +  V P +V F  V+ AC++   
Sbjct: 263 VFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLAT 322

Query: 710 VSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           +    + + +++R  +G    +   S LVD   + G  + A ++   M      S    +
Sbjct: 323 LHLGKQLHGYVLRGGFGRNIFIA--SALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAII 380

Query: 769 LG 770
           +G
Sbjct: 381 MG 382



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 22/320 (6%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           D+L GK  H  ++      D ++ ++L+ MY++   +  + R+F  +  RD ISWNS++A
Sbjct: 221 DVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y  +G  N     E  RLFR +  +      +  + ++  C     +   + +HGY L+
Sbjct: 281 GYVQNGRYN-----EALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 335

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G   + F++ ALV++YSK G I+ A+ +FD M   D V W  ++  +A +G G E   L
Sbjct: 336 GGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSL 395

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F ++ R G+ P+  +   VL   S +G   E    A+      +N+ + V   N++L  Y
Sbjct: 396 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDE----AWG----YFNSMTKVYGLNQELEHY 447

Query: 308 LQVGD---NHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT--TLKS 361
             V D     G +E   + I +  V+     +   L++ +   NL L +++     T+ S
Sbjct: 448 AAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDS 507

Query: 362 GFYSAVIVGNSLINMYSKMG 381
               A ++   + NMY+  G
Sbjct: 508 ENMGAYVL---MCNMYASNG 524



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 34/339 (10%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           FS +L  F++          + + S+L+      DL  G+S H  I+      D +  N 
Sbjct: 86  FSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           LM MYS+   +   R++F+ MP +D++S+N+++A YA SG        +  R+ R +  S
Sbjct: 146 LMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSG-----MYEDALRMVREMGTS 200

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                  TL+ +L +      V   + +HGY ++ G+  D ++  +LV++Y+K  +I ++
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           + +F  +  RD + W  ++  Y +NG   E   LF  +  + + P   +   V+   + L
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320

Query: 274 GKRH-EEQVQAYAIK-------------LLLYNNNSNV---------------VLWNKKL 304
              H  +Q+  Y ++             + +Y+   N+               V W   +
Sbjct: 321 ATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAII 380

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            G+   G  H A+  F  M R  V+ + V F+  L A +
Sbjct: 381 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 419



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 167/367 (45%), Gaps = 35/367 (9%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           SSS +   +++++          K  HA+ + +  +      + ++++Y+    L  A  
Sbjct: 2   SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALL 60

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
           +F  +    +++W S++  +      +    +     F  +R S           +LK C
Sbjct: 61  VFKTLESPPVLAWKSVIRCFT-----DQSLFSRALASFVEMRASGRCPDHNVFPSVLKSC 115

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
                +   E+VHG+ +++G+  D +   AL+N+YSK   I   + +F+ M  +DVV + 
Sbjct: 116 TMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYN 175

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIK- 287
            ++  YA++G  E+   +  ++  S L PD  ++  VL + S+ +     +++  Y I+ 
Sbjct: 176 TVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK 235

Query: 288 ------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECF 320
                       + +Y  ++ +               + WN  ++GY+Q G  + A+  F
Sbjct: 236 GIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLF 295

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M+ + V+  +V F   + A A    L+LG+Q+HG  L+ GF   + + ++L++MYSK 
Sbjct: 296 RQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC 355

Query: 381 GCVCGLR 387
           G +   R
Sbjct: 356 GNIQAAR 362


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 218/730 (29%), Positives = 349/730 (47%), Gaps = 105/730 (14%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A +LL      N V +N  +  Y + G    ++E      R+ V  D  ++  ALAA + 
Sbjct: 62  ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSR 121

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------- 384
             +L  G+ +H   +  G  S V V NSL++MYSK G +                     
Sbjct: 122 AGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSL 181

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEG-LHLSKQIHVHAIKN 420
                                  G+  + F L SV++  S   +G + +++ +H   IK 
Sbjct: 182 VSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKA 241

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN------SH 474
              +D F+ +A+ID+Y + G++ EA  LF +    ++  +N MI G+  +        + 
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL L+S + + G +  E T ++ ++AC     L+ GKQ+H   +K  F+ D  + S ++
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           D+Y   G M D    F   P  D V WT M+SGCV N   + ALS++H+   +G+ PD F
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           T + ++ A + L     G QI     K        +G S V MYA+ G+++ A   F++M
Sbjct: 422 TISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM 481

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
           +  + V W+A++   AQHG   + L  F++M    V P+ +TF+GVL+ACS+ GLV E  
Sbjct: 482 ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGL 541

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
             +  M + YG+ P ++H + +VD LGRAGR  +A   I +  F A   + R+LL +CR+
Sbjct: 542 RYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRI 601

Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--- 831
             D E G+ VA ++M LEP  S++YV+L N++  A +    +  R  MK++ VKK+P   
Sbjct: 602 HRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLS 661

Query: 832 --------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                               +  I+ K+E ++ RI++            D E  ++E+ L
Sbjct: 662 WIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK--------LATTDTEISKREQNL 713

Query: 872 Y-YHSEKLARAYGLISTPPSSVIL---------------------SNKEPLYAN--RFHH 907
              HSEKLA A G+I  P S+ I                       N+E +  +  RFHH
Sbjct: 714 MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHH 773

Query: 908 LRDGMCPCAD 917
            RDG C CAD
Sbjct: 774 FRDGSCSCAD 783



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 237/562 (42%), Gaps = 88/562 (15%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FL N L+  Y R G  + ARRL D+MP R+ +S+N ++ AY+  G       T    L R
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLET----LAR 99

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
           + R  +    R + A  L  C  +G++ A   VH  A+  GL    FVS +LV++YSK G
Sbjct: 100 ARRAGVD-VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           ++ EA+ +FD  +ERD V W  ++  Y   G  EE+  +F  + R G+  +  ++  V+ 
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 269 VISDLGKRHEEQVQA-----------------------YAIK--------LLLYNNNSNV 297
             S  G    +  +A                       YA K        L       NV
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278

Query: 298 VLWNKKLSGYLQVGDNHG------AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           V++N  ++G+ +     G      A+  +  +    +Q    TF   L A      L  G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------- 383
           +QIHG  +K  F     +G++LI++Y   GC+                            
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398

Query: 384 ---------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           GL+ D FT++SV+ A +SL       +QI   A K+     + +
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA-RAGEQIQCFATKSGFDRFTVM 457

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
             + + +Y R+G +  A   F+  +  D+ +W+A+I  +     +  AL  F  M  +  
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQ 547
             +EIT    + AC    ++ +G + +    K  G    +   + ++D+  + G + DA+
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577

Query: 548 S-IFNDIPAPDDVAWTTMISGC 568
           + I N I   D V W ++++ C
Sbjct: 578 AFISNGIFHADPVIWRSLLASC 599



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 9/342 (2%)

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           A  F+   L+  YCR G    A  L +     +  ++N +I  Y     +  +LE  +  
Sbjct: 41  ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             +G  +D  + A A+ AC     L+ G+ +HA A+  G    + VS+ ++ MY KCG M
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            +A+ +F+     DDV+W +++SG V  G  +  + ++  MR  G+  + F    ++K  
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220

Query: 604 SCL--TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           S      ++    +H  +IK    SD F+  +++DMYAK G + +A  LF+ +   N V+
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 662 WNAMLVGLAQHGN------GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
           +N M+ G  +           E L L+ ++++ G++P   TF  VL AC+  G + E  +
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYL-EFGK 339

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
             H    KY  + +    S L+D    +G  ++      S P
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP 381



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 10/230 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR       L  GK  H +++  +   D F+ + L+ +Y   G +    R F   P  
Sbjct: 324 SVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKH 383

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+++W +++     SG    E   +   LF     +       T++ ++  C S     A
Sbjct: 384 DIVTWTAMV-----SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARA 438

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +  +A K G      +  + V++Y++ G +  A   F  M+  DVV W  ++  +A+
Sbjct: 439 GEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ 498

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDES-----VQCVLGVISDLGKRHEEQVQ 282
           +G   +  H F ++  + + P++ +       C  G + D G R+ E + 
Sbjct: 499 HGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMN 548


>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Glycine max]
          Length = 616

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 211/612 (34%), Positives = 303/612 (49%), Gaps = 84/612 (13%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT-VADSFVSTALIDVYCRNGSMAEA 445
           R  +    S+L + ++L E   +  Q+ V  I N+      FV+T  +       ++  A
Sbjct: 6   RIAKHPTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALH---NTTNLDYA 62

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH-MHTSGERL--DEITIATAVKAC 502
             L  + +   L T N+MI  Y  S+   K+   +++ +H++   L  D  T    V+ C
Sbjct: 63  NKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTC 122

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV------------------------ 538
             L     G  +H   +K GFELD  V +G++ MY                         
Sbjct: 123 AQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQT 182

Query: 539 -------KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
                  KCG +  A+ +F+++P  D V W  MI+G    G    AL ++H M++ GV  
Sbjct: 183 AMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKL 242

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +E +  +++ A + L  L+ GR +HA + +        +G +LVDMYAKCGN++ A  +F
Sbjct: 243 NEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVF 302

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             M  RN   W++ + GLA +G GEE+L LF DMK  GV+P+ +TFI VL  CS  GLV 
Sbjct: 303 WGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVE 362

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
           E  ++F  MR  YGI P++EHY  +VD  GRAGR KEA   I SMP         ALL A
Sbjct: 363 EGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHA 422

Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
           CR+  + E G+    K++ LE  +  AYVLLSNI+A    W+ V+S R  MK K VKK P
Sbjct: 423 CRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLP 482

Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
                                   D I  K+E + K ++  GYV +T+ VL D+EEEEKE
Sbjct: 483 GCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKE 542

Query: 869 RALYYHSEKLARAYGLISTP---PSSVILS------------------NKEPLY--ANRF 905
            AL  HSEK+A A+GLIS     P  V+++                  N+E +    NRF
Sbjct: 543 DALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRF 602

Query: 906 HHLRDGMCPCAD 917
           HH +DG C C D
Sbjct: 603 HHFKDGECSCKD 614



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 5/189 (2%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           PD      ++   ++CG + +AR++FD+MP+RD ++WN+++A YA  G        E   
Sbjct: 176 PDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSR-----EALD 230

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           +F  ++      + +++  +L  C     +     VH Y  +  +     +  ALV++Y+
Sbjct: 231 VFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYA 290

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G +  A  +F GM+ER+V  W   +   A NGFGEE   LF D+ R G+ P+  +   
Sbjct: 291 KCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFIS 350

Query: 266 VLGVISDLG 274
           VL   S +G
Sbjct: 351 VLKGCSVVG 359



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 57/319 (17%)

Query: 73  KSTHAR-----ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           K  HA+     ILN+     +F+            +L YA +L +   +  L + NS++ 
Sbjct: 26  KQIHAQLVVKGILNNPHFHGQFVAT---IALHNTTNLDYANKLLNHNNNPTLFTLNSMIR 82

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFT---SRLTLAPLLKLCLSSGYVWASETVHGY 184
           AY+ S        ++ F  + ++  S          T   L++ C           VHG 
Sbjct: 83  AYSKSS-----TPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGA 137

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            +K G   D  V   LV +Y++ G +     +FDG  E D+V    ML A A+       
Sbjct: 138 VIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAK------- 190

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKL 304
                       C D +                      +A K+       + V WN  +
Sbjct: 191 ------------CGDID----------------------FARKMFDEMPERDHVTWNAMI 216

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           +GY Q G +  A++ F  M    V+ + V+ ++ L+A      L+ G+ +H    +    
Sbjct: 217 AGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVR 276

Query: 365 SAVIVGNSLINMYSKMGCV 383
             V +G +L++MY+K G V
Sbjct: 277 MTVTLGTALVDMYAKCGNV 295


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 194/652 (29%), Positives = 325/652 (49%), Gaps = 68/652 (10%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N  + LWN  +S Y ++G+   ++  F  M    ++ DS TF   L   A +  +   ++
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------------ 383
           +HG  LK GF S   V NSLI  Y K G V                              
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239

Query: 384 -------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G+  D  TL +VL A +++   L L + +H + +K         + 
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGN-LTLGRALHAYGVKAGFSGGVMFNN 298

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
            L+D+Y + G++  A  +F       + +W ++I  ++     ++A+ LF  M + G R 
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D   + + V AC C   L +G+++H +  K+    +L VS+ +++MY KCG+M +A  IF
Sbjct: 359 DIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIF 418

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +P  + V+W TMI G   N   + AL ++  M+   + PD+ T A ++ A + L ALE
Sbjct: 419 SQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALE 477

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           +GR+IH ++++    SD  V  +LVDMY KCG +  A  LF  +  ++ +LW  M+ G  
Sbjct: 478 KGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG 537

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG G+E +  FE M+  G+EP+  +F  +L AC+++GL+ E ++ F  M+ +  IEP++
Sbjct: 538 MHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKL 597

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EHY+ +VD L R+G    A + I +MP +  A++  ALL  CR+  D E  + VAE +  
Sbjct: 598 EHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE 657

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD-------------------- 830
           LEP ++  YVLL+N++A A +W++V   +  + +  +K D                    
Sbjct: 658 LEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDT 717

Query: 831 ---PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
               A +I + +  L  ++  GGY     + L++ ++  KE  L  HSEKLA
Sbjct: 718 SHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLA 769



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 153/617 (24%), Positives = 266/617 (43%), Gaps = 85/617 (13%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           ++ LL   Q+S    ++    + S+L+       L  GK  H+ I ++    D  L   L
Sbjct: 43  AMKLLSRSQRSELELNT----YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKL 98

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY  CG LV  RR+FD + +  +  WN +++ YA  G     N  E   LF  ++E  
Sbjct: 99  VFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIG-----NYRESVGLFEKMQELG 153

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T   +LK   +S  V   + VHGY LK+G      V  +L+  Y K G++  A+
Sbjct: 154 IRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESAR 213

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LFD + +RDVV W  M+     NGF       F+ +   G+  D  ++  VL   +++G
Sbjct: 214 ILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVG 273

Query: 275 KRH-EEQVQAYAIKL-----LLYNNN-----------------------SNVVLWNKKLS 305
                  + AY +K      +++NN                        + +V W   ++
Sbjct: 274 NLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIA 333

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
            +++ G ++ AI  F  M    ++ D       + A A +++L+ G+++H    K+   S
Sbjct: 334 AHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGS 393

Query: 366 AVIVGNSLINMYSKMGCV------------------------------------------ 383
            + V N+L+NMY+K G +                                          
Sbjct: 394 NLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ 453

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
             L+ D  T+A VL A + L   L   ++IH H ++    +D  V+ AL+D+Y + G + 
Sbjct: 454 KQLKPDDVTMACVLPACAGLA-ALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLV 512

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A+ LF+     D+  W  MI GY +     +A+  F  M  +G   +E +  + + AC 
Sbjct: 513 LAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACT 572

Query: 504 CLLMLKQGKQMHAYAMKS--GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVA 560
              +LK+G ++   +MKS    E  L   + ++D+ ++ G +  A      +P  PD   
Sbjct: 573 HSGLLKEGWKLFD-SMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAI 631

Query: 561 WTTMISGCVDNGEEDLA 577
           W  ++SGC  + + +LA
Sbjct: 632 WGALLSGCRIHHDVELA 648



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 30  NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRF 89
           +LP+ +L L   +QK       + +    +L      + L  G+  H  IL      D  
Sbjct: 440 SLPNEALQLFLDMQKQLKPDDVTMA---CVLPACAGLAALEKGREIHGHILRKGYFSDLH 496

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           +   L+ MY +CG LV A++LFD +P +D+I W  ++A Y   G G      E    F  
Sbjct: 497 VACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGK-----EAISTFEK 551

Query: 150 LRESITFTSRLTLAPLLKLCLSSG 173
           +R +       +   +L  C  SG
Sbjct: 552 MRVAGIEPEESSFTSILYACTHSG 575


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 211/675 (31%), Positives = 330/675 (48%), Gaps = 101/675 (14%)

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL-------GQQ 353
           N+ L  Y + G    A   F NM + +V Y   T L A A +   +NL++          
Sbjct: 62  NQLLHLYAKFGKLSDAQNVFDNMTKRDV-YSWNTLLSAYAKMGMVENLHVVFDQMPYRDS 120

Query: 354 IHGTTLKSGFYSAVIVGNSL---INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           +   TL + F S    G +L   + M        G +  Q++  + L+A S L +  H  
Sbjct: 121 VSYNTLIACFASNGHSGKALKVLVRMQED-----GFQPTQYSHVNALQACSQLLDLRH-G 174

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQIH   +  D   ++FV  A+ D+Y + G + +A  LF+     ++ +WN MI GY+  
Sbjct: 175 KQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKM 234

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            N ++ + LF+ M  SG + D +T+                                   
Sbjct: 235 GNPNECIHLFNEMQLSGLKPDLVTV----------------------------------- 259

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           S +L+ Y +CG + DA+++F  +P  D++ WTTMI G   NG E+ A  ++  M    V 
Sbjct: 260 SNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVK 319

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD +T + +V + + L +L  G+ +H  ++ +   +   V  +LVDMY KCG   DA ++
Sbjct: 320 PDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVI 379

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F+ M +RN + WNAM++G AQ+G   E L L+E M+    +PD++TF+GVLSAC    +V
Sbjct: 380 FETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMV 439

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F  + E +GI P ++HY+ ++  LGR+G   +A +LI  MP E +  +   LL 
Sbjct: 440 KEGQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLS 498

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
            C  +GD +  +  A  L  L+P ++  Y++LSN++AA  +W DV   R  MK KN KK 
Sbjct: 499 VC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKF 557

Query: 831 PA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
            A                         I+ ++  LI  +++ GY PDT+ VL +V EEEK
Sbjct: 558 AAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEK 617

Query: 868 ERALYYHSEKLARAYGLISTP----PSSVI-----------------LSNKEPLY---AN 903
            R++ YHSEKLA A+ LI  P    P  +I                 ++   P+    +N
Sbjct: 618 FRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSN 677

Query: 904 RFHHLRDGMCPCADN 918
           RFHH   G C C DN
Sbjct: 678 RFHHFFGGKCSCNDN 692



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 133/567 (23%), Positives = 235/567 (41%), Gaps = 99/567 (17%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARI-LNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +S   +  ++ H    +D +  K   + + LN  Q  D F+ N L+ +Y++ G L  A+ 
Sbjct: 20  ASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQN 79

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT-------- 161
           +FD M  RD+ SWN++L+AYA  G    EN+   F      R+S+++ + +         
Sbjct: 80  VFDNMTKRDVYSWNTLLSAYAKMGM--VENLHVVFDQM-PYRDSVSYNTLIACFASNGHS 136

Query: 162 --------------LAPL-------LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGAL 200
                           P        L+ C     +   + +HG  +   L  + FV  A+
Sbjct: 137 GKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAM 196

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
            ++Y+K G I +A+ LFDGM +++VV W +M+  Y + G   E  HLF ++  SGL PD 
Sbjct: 197 TDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDL 256

Query: 261 ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
            +V  VL      G+  +      A  L +     + + W   + GY Q G    A   F
Sbjct: 257 VTVSNVLNAYFRCGRVDD------ARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLF 310

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
            +M+R NV+ DS T    +++ A   +L  GQ +HG  +  G  ++++V ++L++MY   
Sbjct: 311 GDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMY--- 367

Query: 381 GCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
            C CG+  D   +   +                         + +     A+I  Y +NG
Sbjct: 368 -CKCGVTLDARVIFETM------------------------PIRNVITWNAMILGYAQNG 402

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            + E                               AL L+  M     + D IT    + 
Sbjct: 403 QVLE-------------------------------ALTLYERMQQENFKPDNITFVGVLS 431

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
           AC    M+K+G++      + G    L   + ++ +  + G++  A  +   +P  P+  
Sbjct: 432 ACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYR 491

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRL 586
            W+T++S C     ++  L+  H   L
Sbjct: 492 IWSTLLSVCAKGDLKNAELAASHLFEL 518



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 67/377 (17%)

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY----------------- 467
           DSF+   L+ +Y + G +++A+ +F+N    D+ +WN ++  Y                 
Sbjct: 57  DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMP 116

Query: 468 ------------ILSNNSH--KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
                         ++N H  KAL++   M   G +  + +   A++AC  LL L+ GKQ
Sbjct: 117 YRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQ 176

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   + +    +  V + + DMY KCG +  A+ +F+ +   + V+W  MISG V  G 
Sbjct: 177 IHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGN 236

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            +  + ++++M+LSG+ PD      LV  S+ L A                         
Sbjct: 237 PNECIHLFNEMQLSGLKPD------LVTVSNVLNA------------------------- 265

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
               Y +CG ++DA  LF ++  ++ + W  M+VG AQ+G  E+   LF DM    V+PD
Sbjct: 266 ----YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPD 321

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
           S T   ++S+C+    +    +  H      GI+  +   S LVD   + G T +A  + 
Sbjct: 322 SYTISSMVSSCAKLASLYHG-QVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIF 380

Query: 754 LSMPFEASASMHRALLG 770
            +MP     + +  +LG
Sbjct: 381 ETMPIRNVITWNAMILG 397



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 79/370 (21%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           Q SH ++  + SQ    LRH         GK  H RI+ +    + F+ N +  MY++CG
Sbjct: 155 QYSHVNALQACSQLLD-LRH---------GKQIHGRIVVADLGENTFVRNAMTDMYAKCG 204

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
            +  AR LFD M D++++SWN +++ Y   G  N     E   LF  ++ S         
Sbjct: 205 DIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPN-----ECIHLFNEMQLS--------- 250

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
                                     GL  D      ++N Y + G++ +A+ LF  + +
Sbjct: 251 --------------------------GLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPK 284

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           +D + W  M+  YA+NG  E+ + LF D+ R  + PD  ++  ++   + L   +  QV 
Sbjct: 285 KDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVV 344

Query: 283 AYAIKLLLYNNN-----------------------------SNVVLWNKKLSGYLQVGDN 313
              + ++  +N+                              NV+ WN  + GY Q G  
Sbjct: 345 HGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQV 404

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A+  +  M + N + D++TF+  L+A    D +  GQ+   +  + G    +     +
Sbjct: 405 LEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACM 464

Query: 374 INMYSKMGCV 383
           I +  + G V
Sbjct: 465 ITLLGRSGSV 474



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 36/147 (24%)

Query: 592 DEFTFAIL--VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA-- 647
           D++T  +L   +A+  + A      +  NL +     D F+   L+ +YAK G + DA  
Sbjct: 23  DDYTRLVLHCARANDFIQAKRLQSHMELNLFQ---PKDSFIHNQLLHLYAKFGKLSDAQN 79

Query: 648 -----------------------------YILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
                                        +++F QM  R++V +N ++   A +G+  + 
Sbjct: 80  VFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKA 139

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACS 705
           LK+   M+  G +P   + +  L ACS
Sbjct: 140 LKVLVRMQEDGFQPTQYSHVNALQACS 166


>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 359/746 (48%), Gaps = 76/746 (10%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDG 219
           +LA  L  C + G ++    +H   LK G++     +   L+ +YS+   +REA+ LF+ 
Sbjct: 8   SLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           M +R+   W  M+  Y ++G   +   LF  +      P  ++    + VIS   K    
Sbjct: 68  MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM------PHKDAFSWNV-VISGFAKEGNL 120

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY---DSVTFL 336
           +V       + + N    + WN  + GY   G    A+  F ++  + ++    D+    
Sbjct: 121 EVARRLFNEMPWKNG---IAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLA 177

Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
             + A      L+ G+QIH   +        ++G+SL+N+Y K G +             
Sbjct: 178 TVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDI------------- 224

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                S    L+L K+            D+F  +ALI  Y   G M +A  +F  K    
Sbjct: 225 ----DSANHVLNLMKE-----------PDAFSLSALISGYASCGRMNDARRIFCLKSNXC 269

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN+MI GY+ +N + +ALELF++M   G + D  T A+ + AC  L ++ QG Q+HA
Sbjct: 270 VVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHA 329

Query: 517 YAMKSGFELDLCVSSGILDMYVKC-------------------------------GAMVD 545
           +  K GF  D+ + S ++DMY KC                               G + D
Sbjct: 330 HVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDD 389

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+ IF+ +P+   ++W +MI G   N     AL ++ +M   G+  D+F+ A ++ A + 
Sbjct: 390 ARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACAS 449

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           +++LE G QI A    +    D  +  SLVD Y KCG +E    LF +M   + V WN+M
Sbjct: 450 ISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSM 509

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           L+G A +G+G E L +F+ M++ GV+P  +TF+GVLSAC + GLV E  + F+ M+  Y 
Sbjct: 510 LMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYH 569

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I P +EHYS +VD   RAG  ++A  LI  MP +A  SM  ++L  C   G+   GK VA
Sbjct: 570 INPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVA 629

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAK--VEGLI 843
           ++++ L+P +S AYV LS I+A    W      R  M  K + KD +  I  +   EGL 
Sbjct: 630 KRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIAGEEGXEGLS 689

Query: 844 KRIKEGGYVPD-TDFVLLDVEEEEKE 868
              KE   +    + VL  V E+++E
Sbjct: 690 SETKEVTKMKQRQNLVLRLVAEKKRE 715



 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 235/854 (27%), Positives = 401/854 (46%), Gaps = 101/854 (11%)

Query: 59   ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
            ++    S S L LG+   AR        D+ ++ +L+  Y +CG + + R+LFD+M   D
Sbjct: 443  VISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSD 502

Query: 119  LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
             + WNS+L  YA +G G      E   +F  +R      + +T   +L  C   G V   
Sbjct: 503  EVPWNSMLMGYATNGHG-----IEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEG 557

Query: 179  ETVHGYALKIGLVWDEFVS--GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLR-- 233
                 YA+K+    +  +     +V++Y++ G + +A  L + M  + D  +W  +LR  
Sbjct: 558  RKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGC 616

Query: 234  -AYAENGFGEEV---------------------FHLFVDLHRS----------------- 254
             A+  N  G++V                     +  F D  RS                 
Sbjct: 617  VAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTS 676

Query: 255  ----------GLCPDDESV-------QCVLGVISDLGKRHEEQVQAY--AIKLLLYNN-- 293
                      GL  + + V         VL ++++  +  +E+ Q +  A + LL  +  
Sbjct: 677  FDIAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFMAARRTLLEFDML 736

Query: 294  -----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                 N++  L N+ L  Y Q+G  + ++  F ++I  N+    +++ + L A      L
Sbjct: 737  IKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNL----ISWNIFLKAFVRFGEL 792

Query: 349  NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------CGLRTDQFTLASV 396
               + +     K      V+  N++I+ Y   G               G+R   FT +++
Sbjct: 793  ERARDVFDEMPKRD----VVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTL 848

Query: 397  LRASSSLPEGLHLSKQIHVHAIKNDT-VADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
            L   SS   G    KQIH   I+N   +++  V  +LI +Y + G +  A  +F   +  
Sbjct: 849  LSFVSSACRG----KQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEEL 904

Query: 456  DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
            D+ +WN++I+    S   + AL  F  M + G   D+ T++T +  C  L  L++G+Q+ 
Sbjct: 905  DIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIF 964

Query: 516  AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
            A  ++ GF  +  VSS  +D++ KC  + D+  +F +I   D V    MIS    +G  +
Sbjct: 965  ALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGE 1024

Query: 576  LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
             AL ++       + P EFT +I++ A S L  ++QG QIH+ ++K    SD  V  SLV
Sbjct: 1025 NALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLV 1084

Query: 636  DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            +MYAK G I+ A   F ++  R+ + WN M++GLA +G   + L++F+++   G  PD +
Sbjct: 1085 EMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEI 1144

Query: 696  TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
            T  GVL AC+  GLV E    F  M ++YG+ P +EHY+ +VD + R G+ KEA +++  
Sbjct: 1145 TLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVEL 1204

Query: 756  MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
            MP E S  +  +LL AC + GD    + VAE++M LEP  S  Y++L+  +    +W+ +
Sbjct: 1205 MPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESL 1264

Query: 816  TSARGEMKRKNVKK 829
                  MK K V+K
Sbjct: 1265 VRVXRAMKEKGVRK 1278



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 196/858 (22%), Positives = 345/858 (40%), Gaps = 203/858 (23%)

Query: 72  GKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G+  H   L S  +     + N L+ MYSRC S+  A++LF++MP R+  SWN+++  Y 
Sbjct: 25  GRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYL 84

Query: 131 HSG-----------------------------EGNAE------------------NVTEG 143
            SG                             EGN E                  ++  G
Sbjct: 85  KSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHG 144

Query: 144 FRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV------------ 191
           +      +E++     L+L PL + C   G  +   TV G    +G +            
Sbjct: 145 YACNGRPKEAVGLFKDLSLNPLERFC---GDTFVLATVVGACTNLGALDCGKQIHARIVV 201

Query: 192 ----WDEFVSGALVNIYSKFGKIREAKFLFDGMQERD----------------------- 224
               +D  +  +LVN+Y K G I  A  + + M+E D                       
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261

Query: 225 --------VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
                   VVLW  M+  Y  N    E   LF ++ R G+  D  +   VL   S LG  
Sbjct: 262 FCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321

Query: 277 HEE-QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ-YDSVT 334
            +  QV A+  K+   N   ++++ +  +  Y +      A + F     S++Q YD++ 
Sbjct: 322 DQGIQVHAHVYKVGFTN---DIIIDSALVDMYSKCRRPDDACKLF-----SDLQAYDTIL 373

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC-------VC--- 384
               +   +    ++  +QI  T        ++I  NS+I  +S+  C        C   
Sbjct: 374 LNSMITVYSNCGRIDDARQIFDTMPS----KSLISWNSMIVGFSQNACPIEALDLFCEMN 429

Query: 385 --GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             GLR D+F+LA V+ A +S+   L L +QI   A       D  +ST+L+D YC+ G +
Sbjct: 430 KLGLRMDKFSLAGVISACASI-SSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLV 488

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
                LF+     D   WN+M+ GY  + +  +AL +F  M + G +  +IT    + AC
Sbjct: 489 EHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSAC 548

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
               ++++G++   YAMK  + ++  +   S ++D+Y + G + DA ++   +P   D +
Sbjct: 549 DHCGLVEEGRKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTS 607

Query: 561 -WTTMISGCVDNGEEDLALSIYHQM------------RLSGV------------------ 589
            W++++ GCV +G   L   +  ++            +LSG+                  
Sbjct: 608 MWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMY 667

Query: 590 ---VPDEFTFAI--------LVKASSCLTALEQGRQIHANL------------------- 619
              +P + +F I        L   +  +T ++Q + +   L                   
Sbjct: 668 DKKIPKDTSFDIAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFMAAR 727

Query: 620 ---------IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
                    IK+  ++  F+G   +D+Y++ G   D+  +F+ +  +N + WN  L    
Sbjct: 728 RTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFV 787

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           + G  E    +F++M       D V++  ++S     GL  +A+  F  M +K GI P  
Sbjct: 788 RFGELERARDVFDEMPKR----DVVSWNTMISGYVSFGLFDDAFRFFSEM-QKAGIRPSG 842

Query: 731 EHYSFLVDALGRAGRTKE 748
             YS L+  +  A R K+
Sbjct: 843 FTYSTLLSFVSSACRGKQ 860



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 132/632 (20%), Positives = 242/632 (38%), Gaps = 128/632 (20%)

Query: 51   SSSSQWFSILRHAISTSDLLLGKSTHARI--LNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
            + +S W S+LR  ++  + +LGK    RI  L+          + +   +   G     R
Sbjct: 604  ADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVR 663

Query: 109  RL-FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLK 167
            +L +DK   +D         ++  +GE   E ++   +    +++      RL +A   +
Sbjct: 664  KLMYDKKIPKD--------TSFDIAGEEGXEGLSSETKEVTKMKQRQNLVLRL-VAEKKR 714

Query: 168  LC--LSSGYVWASETVHGY--ALKIGLVWDEFVSGALVNIYS------------------ 205
             C      ++ A  T+  +   +K+G     F+    +++YS                  
Sbjct: 715  ECDERDQKFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDK 774

Query: 206  -------------KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
                         +FG++  A+ +FD M +RDVV W  M+  Y   G  ++ F  F ++ 
Sbjct: 775  NLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQ 834

Query: 253  RSGLCPDDESVQCVLGVISD---------------------------LGKRHEEQVQAYA 285
            ++G+ P   +   +L  +S                            +G   +  V  YA
Sbjct: 835  KAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYA 894

Query: 286  IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
              + +     +++ WN  +    + G  + A+  FV M       D  T    +   +  
Sbjct: 895  FGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNL 954

Query: 346  DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-----------------CVC---- 384
             +L  G+QI    ++ GF S  IV ++ I+++SK                    +C    
Sbjct: 955  QDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMI 1014

Query: 385  ----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
                                   LR  +FTL+ VL A S L   +    QIH   +K+  
Sbjct: 1015 SSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLP-VDQGSQIHSLVVKSGL 1073

Query: 423  VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             +D  V+++L+++Y + G +  A   F      DL +WN MI G   +    KALE+F  
Sbjct: 1074 ESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKE 1133

Query: 483  MHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMY 537
            +   G   DEIT+A  + AC    ++ +G  + +     Y +    E   C    I+DM 
Sbjct: 1134 LLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYAC----IVDMM 1189

Query: 538  VKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             + G + +A  I   +P  P  + W +++  C
Sbjct: 1190 SRGGKLKEAMDIVELMPHEPSGLIWGSLLCAC 1221


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 191/553 (34%), Positives = 290/553 (52%), Gaps = 46/553 (8%)

Query: 411  KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
            K+ H          DS + T    +Y     +  A  +FE+        WN MI G+   
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 471  NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
                 +LEL+S M   G + D+     A+K+C  L  L++GK +H + +  G   DL V 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 531  SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            + ++DMY KCG +  A+ +F+ +   D V+WT+MISG   NG     L  +  MR SGV+
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916

Query: 591  PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            P+  +   ++ A   L AL +G   H+ +I+     D  V  +++DMY+KCG+++ A  L
Sbjct: 917  PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976

Query: 651  FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
            F +   ++ V W+AM+     HG+G + + LF+ M   GV P  VTF  VLSACS++GL+
Sbjct: 977  FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036

Query: 711  SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
             E    F LM E++ I  ++ +Y+ +VD LGRAG+  EA +LI +MP E  AS+  +LLG
Sbjct: 1037 EEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096

Query: 771  ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
            ACR+  + +  + +A+ L  L+P  +  +VLLSNI+AA ++W++V   R  M R+   K 
Sbjct: 1097 ACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKI 1156

Query: 831  PA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
                                     + ++AK+E L   +K  GYVP TDFVL D+EEE K
Sbjct: 1157 QGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAK 1216

Query: 868  ERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--R 904
            E AL YHSE+LA A+GLI+T P + +                     + N+  L  +  R
Sbjct: 1217 EAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHR 1276

Query: 905  FHHLRDGMCPCAD 917
            FH   DG+C C D
Sbjct: 1277 FHRFEDGVCSCGD 1289



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 196/638 (30%), Positives = 315/638 (49%), Gaps = 71/638 (11%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           + NV LWN  L  Y +       +  F  MI  +    D+ T  +AL A AG   L LG+
Sbjct: 64  HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123

Query: 353 QIHGTTLKSG-FYSAVIVGNSLINMYSKMG----------------------CVCGLRT- 388
            IHG   K+    S + VG++L+ +YSK G                       V G +  
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQN 183

Query: 389 ---------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                                D  TL SV+ A + L   +     +H   I+ +   D  
Sbjct: 184 NDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLN-VKAGSCVHGLVIRREFDGDLP 242

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  +L+++Y + G    A  LF      D+ +W+ MI  Y  +  +++AL LF  M    
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              + +T+ +A++AC     L++GK++H  A+  GFELD  VS+ ++DMY+KC    +A 
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAV 362

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F  +P  D V+W  ++SG   NG    ++ ++  M   G+ PD      ++ ASS L 
Sbjct: 363 DLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 422

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
             +Q   +H  +++   +S+ FVG SL+++Y+KCG++ DA  LFK M +R+ V+W++M+ 
Sbjct: 423 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIA 482

Query: 668 GLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
               HG G E L++F+ M K   V P++VTF+ +LSACS+ GLV E  + F  M   Y +
Sbjct: 483 AYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQL 542

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P+ EH+  +VD LGR G+  +A ++I  MP  A   +  ALLGACR+  + E G+  A+
Sbjct: 543 RPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAK 602

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK----------------- 829
            L  L+P  +  Y+LLSNI+A   +WD+V   R  +K + +KK                 
Sbjct: 603 NLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFL 662

Query: 830 ------DPADLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
                   +  I+  +  L  ++ +  Y+PD DF+L D
Sbjct: 663 ASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 157/602 (26%), Positives = 268/602 (44%), Gaps = 92/602 (15%)

Query: 158 SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF 217
           SR  L  L + C +   V     +H    K G++ D F +  L ++Y+K   ++ A+ +F
Sbjct: 3   SRQVLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLF-VDLHRSGLCPDDESVQCVL--------- 267
           D     +V LW   LR+Y      EE   LF + +  +G  PD+ ++   L         
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 268 ---GVISDLGKRHEE----------QVQAY--------AIKLLLYNNNSNVVLWNKKLSG 306
               VI    K+++E           V+ Y        A+K+       + VLW   ++G
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179

Query: 307 YLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           Y Q  D   A+  F  M+  + V  D VT +  ++A A   N+  G  +HG  ++  F  
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDG 239

Query: 366 AVIVGNSLINMYSKMGC-----------------------VC------------------ 384
            + + NSL+N+Y+K GC                        C                  
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 299

Query: 385 --GLRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                 +  T+ S L+A   S +L EG    K+IH  A+      D  VSTALID+Y + 
Sbjct: 300 EKRFEPNSVTVVSALQACAVSRNLEEG----KKIHKIAVWKGFELDFSVSTALIDMYMKC 355

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
               EA  LF+     D+ +W A++ GY  +  ++K++ +F +M + G + D + +   +
Sbjct: 356 SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 415

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
            A   L + +Q   +H Y ++SGF  ++ V + ++++Y KCG++ DA  +F  +   D V
Sbjct: 416 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV 475

Query: 560 AWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            W++MI+    +G    AL I+ QM + S V P+  TF  ++ A S    +E+G +I   
Sbjct: 476 IWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDR 535

Query: 619 LI---KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN 674
           ++   +L   S+ F GI +VD+  + G +  A  +  +M +     +W A+L     H N
Sbjct: 536 MVHDYQLRPDSEHF-GI-MVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHN 593

Query: 675 GE 676
            E
Sbjct: 594 IE 595



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           Q+H    K   + D+F +T L  +Y +  S+  A  +F+     ++  WN+ +  Y    
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 472 NSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCV 529
              + L LF  M  T+GE  D  TI  A+KAC  L ML+ GK +H +A K+     D+ V
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSG 588
            S ++++Y KCG M +A  +F +   PD V WT+M++G   N + + AL+++ QM  +  
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD-PFVGISLVDMYAKCGNIEDA 647
           VV D  T   +V A + L  ++ G  +H  +I+ +   D P V  SL+++YAK G  + A
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN-SLLNLYAKTGCEKIA 260

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             LF +M  ++ + W+ M+   A +    E L LF +M     EP+SVT +  L AC+ +
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
             + E  +  H +    G E +    + L+D   +     EA +L   +P
Sbjct: 321 RNLEEG-KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP 369



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 176/713 (24%), Positives = 308/713 (43%), Gaps = 116/713 (16%)

Query: 76   HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN------------ 123
            H  ++ S    + F+  +L+ +YS+CGSL  A +LF  M  RD++ W+            
Sbjct: 431  HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRG 490

Query: 124  ------------------------SILAAYAHSGEGNAENVTEGFRLFRSLRES------ 153
                                    SIL+A +H+G      V EG ++F  +         
Sbjct: 491  GEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGL-----VEEGLKIFDRMVHDYQLRPD 545

Query: 154  -------ITFTSRL-----TLAPLLKLCLSSG-YVWASE----TVH-----GYALKIGLV 191
                   +    R+      +  + ++ + +G +VW +      +H     G A    L 
Sbjct: 546  SEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLF 605

Query: 192  W-DEFVSG---ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            W D   +G    L NIY+  GK      L   ++ER   L K+  ++  E   G   F  
Sbjct: 606  WLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERG--LKKMFGQSMVEVRGGVHSFLA 663

Query: 248  FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNK---KL 304
                H     PD    Q +  ++  L  +  ++V    +  LL++  + +  W +     
Sbjct: 664  SDRFH-----PDS---QKIYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATE 715

Query: 305  SGYLQVGDNHGA--IECFVNMIRSN-------VQYDS----------VTF-LVALAAVAG 344
            S Y  +G   G   I CF  + +++       +QYDS          V+F  +  A++  
Sbjct: 716  SKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVF 775

Query: 345  TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
             D  N    +    ++ GF +     +SL  +YSKM    GL+ D+F     L++ + L 
Sbjct: 776  EDIPNPCSFLWNVMIR-GFATDGRFLSSL-ELYSKM-MEKGLKPDKFAFPFALKSCAGLS 832

Query: 405  EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
            + L   K IH H +      D FV  AL+D+Y + G +  A  +F+     DL +W +MI
Sbjct: 833  D-LQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMI 891

Query: 465  FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
             GY  +  + + L  F  M +SG   + ++I + + ACG L  L++G+  H+Y +++GFE
Sbjct: 892  SGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFE 951

Query: 525  LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             D+ V++ I+DMY KCG++  A+ +F++    D V W+ MI+    +G    A+ ++ QM
Sbjct: 952  FDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQM 1011

Query: 585  RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGN 643
              +GV P   TF  ++ A S    LE+G+     + +    +      + +VD+  + G 
Sbjct: 1012 VKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQ 1071

Query: 644  IEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            + +A  L + M +  +  +W ++L     H N    L L E +  H    D V
Sbjct: 1072 LSEAVDLIENMPVEPDASIWGSLLGACRIHNN----LDLAEKIADHLFHLDPV 1120



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 240/580 (41%), Gaps = 102/580 (17%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H+++  +  + D F    L ++Y++C SL  AR++FD+ P  ++  WNS L +Y    + 
Sbjct: 24  HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83

Query: 136 NAENVTEGFRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK---IGLV 191
                 E  RLF   +  +       T+   LK C     +   + +HG+A K   IG  
Sbjct: 84  E-----ETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS- 137

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV  ALV +YSK G++ EA  +F+  Q  D VLW  M+  Y +N   EE   LF  +
Sbjct: 138 -DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM 196

Query: 252 --------------HRSGLCPDDESVQ---CVLGVI-------------SDLGKRHEEQV 281
                              C    +V+   CV G++             S L    +   
Sbjct: 197 VMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGC 256

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           +  A  L       +V+ W+  ++ Y      + A+  F  MI    + +SVT + AL A
Sbjct: 257 EKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQA 316

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------------- 384
            A + NL  G++IH   +  GF     V  +LI+MY  M C C                 
Sbjct: 317 CAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMY--MKCSCPDEAVDLFQRLPKKDVV 374

Query: 385 ----------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                                       G++ D   +  +L ASS L      +  +H +
Sbjct: 375 SWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI-FQQALCLHGY 433

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
            +++   ++ FV  +LI++Y + GS+ +A  LF+     D+  W++MI  Y +     +A
Sbjct: 434 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 493

Query: 477 LELFSHM-HTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVS 530
           LE+F  M   S  R + +T  + + AC    ++++G     + +H Y ++   E      
Sbjct: 494 LEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSE-----H 548

Query: 531 SGIL-DMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGC 568
            GI+ D+  + G +  A  I N +P P     W  ++  C
Sbjct: 549 FGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGAC 588



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 17/299 (5%)

Query: 60   LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
            L+     SDL  GK  H  ++      D F+   L+ MY++CG +  AR +FDKM  RDL
Sbjct: 825  LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884

Query: 120  ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
            +SW S+++ YAH+G  N+E  T GF  F  +R S    +R+++  +L  C + G +   E
Sbjct: 885  VSWTSMISGYAHNGY-NSE--TLGF--FDLMRSSGVIPNRVSILSVLLACGNLGALRKGE 939

Query: 180  TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
              H Y ++ G  +D  V+ A++++YSK G +  A+ LFD    +D+V W  M+ +Y  +G
Sbjct: 940  WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHG 999

Query: 240  FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVL 299
             G +   LF  + ++G+ P   +  CVL   S  G   E +        + +   +   +
Sbjct: 1000 HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK--------MYFQLMTEEFV 1051

Query: 300  WNKKLSGYLQVGD---NHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQI 354
              +KLS Y  + D     G +   V++I +  V+ D+  +   L A    +NL+L ++I
Sbjct: 1052 IARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKI 1110



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 35/313 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  ++      D  L N+L+ +Y++ G    A  LF KMP++D+ISW++++A YA 
Sbjct: 225 GSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYA- 283

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
               N E   E   LF  + E     + +T+   L+ C  S  +   + +H  A+  G  
Sbjct: 284 ----NNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFE 339

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D  VS AL+++Y K     EA  LF  + ++DVV W  +L  YA+NG   +   +F ++
Sbjct: 340 LDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNM 399

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHE---------------------EQVQAY------ 284
              G+ PD  +V  +L   S+LG   +                       ++ Y      
Sbjct: 400 LSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSL 459

Query: 285 --AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAA 341
             A+KL       +VV+W+  ++ Y   G    A+E F  M++ S V+ ++VTFL  L+A
Sbjct: 460 GDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSA 519

Query: 342 VAGTDNLNLGQQI 354
            +    +  G +I
Sbjct: 520 CSHAGLVEEGLKI 532



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 34/309 (11%)

Query: 73   KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
            K THA+I       D  +      MY     +  A  +F+ +P+     WN ++  +A  
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 133  GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            G            L+  + E      +      LK C     +   + +H + +  G   
Sbjct: 797  GR-----FLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSN 851

Query: 193  DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
            D FV  ALV++Y+K G I  A+ +FD M  RD+V W  M+  YA NG+  E    F  + 
Sbjct: 852  DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMR 911

Query: 253  RSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------------------ 287
             SG+ P+  S+  VL    +LG  R  E   +Y I+                        
Sbjct: 912  SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971

Query: 288  ----LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                L       ++V W+  ++ Y   G    AI+ F  M+++ V+   VTF   L+A +
Sbjct: 972  LARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS 1031

Query: 344  GTDNLNLGQ 352
             +  L  G+
Sbjct: 1032 HSGLLEEGK 1040


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 196/590 (33%), Positives = 300/590 (50%), Gaps = 82/590 (13%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           L+K++H   IK        +   L++ Y + G + +A  LF+     D   W +++    
Sbjct: 21  LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL--LMLKQGKQMHAYAMKSGFELD 526
           LSN  H+AL +   + ++G   D    A+ VKAC  L  L +KQGKQ+HA    S F  D
Sbjct: 81  LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ--- 583
             V S ++DMY K G     +++F+ I + + ++WTTMISG   +G +  A  ++ Q   
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200

Query: 584 ----------------------------MRLSGV-VPDEFTFAILVKASSCLTALEQGRQ 614
                                       MR  G+ V D    + +V A + L   E G+Q
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H  +I L   S  F+  +L+DMYAKC ++  A  +F +M  ++ V W +++VG AQHG 
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            EE L L+++M   GV+P+ VTF+G++ ACS+ GLVS+    F  M E +GI P ++HY+
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYT 380

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            L+D   R+G   EA  LI +MP         ALL +C+  G+T+    +A+ L+ L+P 
Sbjct: 381 CLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPE 440

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           D S+Y+LLSNI+A A  W+DV+  R  M     KK P                       
Sbjct: 441 DPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPM 500

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            D I   +  L + +++ GY PDT  VL D++++EKER L++HSE+LA AYGL+   P +
Sbjct: 501 RDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 560

Query: 892 VI---------------------LSNKEPLY---ANRFHHLRDGMCPCAD 917
           VI                     ++N+E +Y   A R+HH +DG C C D
Sbjct: 561 VIRIVKNLRVCGDCHTVLKLISAITNRE-IYVRDAKRYHHFKDGNCSCND 609



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 139/638 (21%), Positives = 252/638 (39%), Gaps = 138/638 (21%)

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           LL K  HA+I+ +       + N L+  Y +CG +  A +LFD +P RD ++W S+L A 
Sbjct: 20  LLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTAC 79

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG--YVWASETVHGYALK 187
             S   +         + RSL  +         A L+K C + G  +V   + VH     
Sbjct: 80  NLSNRPH-----RALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFL 134

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
                D+ V  +L+++Y+KFG     + +FD +   + + W  M+  YA +G   E F L
Sbjct: 135 SPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRL 194

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F                                               N+  W   +SG 
Sbjct: 195 FRQ-----------------------------------------TPYRNLFAWTALISGL 213

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT-DNL---NLGQQIHGTTLKSGF 363
           +Q G+   A   FV M    +   SVT  + L++V G   NL    LG+Q+HG  +  G+
Sbjct: 214 VQSGNGVDAFHLFVEMRHEGI---SVTDPLVLSSVVGACANLALWELGKQMHGVVITLGY 270

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
            S + + N+LI+MY+K                                        +D V
Sbjct: 271 ESCLFISNALIDMYAKC---------------------------------------SDLV 291

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           A  ++   +    CR                 D+ +W ++I G      + +AL L+  M
Sbjct: 292 AAKYIFCEM----CRK----------------DVVSWTSIIVGTAQHGQAEEALALYDEM 331

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGA 542
             +G + +E+T    + AC    ++ +G+ +    ++  G    L   + +LD++ + G 
Sbjct: 332 VLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGH 391

Query: 543 MVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIY-HQMRLSGVVPDEFTFAILV 600
           + +A+++   +P  PD+  W  ++S C  +G   +A+ I  H + L    P  +     +
Sbjct: 392 LDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNI 451

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A + +   E   ++   ++ L+    P  G S +D+  K  ++   Y       MR+ +
Sbjct: 452 YAGAGM--WEDVSKVRKLMMTLEAKKAP--GYSCIDL-GKGSHV--FYAGETSHPMRDEI 504

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
                 +GL +        +L E+M+  G  PD+ + +
Sbjct: 505 ------IGLMR--------ELDEEMRKRGYAPDTSSVL 528



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 39/283 (13%)

Query: 12  RHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRH-AISTSDLL 70
           R    +  F  F +  YRNL +++  +   +Q     +   +   F  +RH  IS +D L
Sbjct: 184 RSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSG---NGVDAFHLFVEMRHEGISVTDPL 240

Query: 71  ----------------LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
                           LGK  H  ++        F++N L+ MY++C  LV A+ +F +M
Sbjct: 241 VLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEM 300

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
             +D++SW SI+   A  G+       E   L+  +  +    + +T   L+  C  +G 
Sbjct: 301 CRKDVVSWTSIIVGTAQHGQAE-----EALALYDEMVLAGVKPNEVTFVGLIHACSHAGL 355

Query: 175 VWASETVHGYALKIGLVWDEFVSGA------LVNIYSKFGKIREAKFLFDGMQ-ERDVVL 227
           V       G  L   +V D  +S +      L++++S+ G + EA+ L   M    D   
Sbjct: 356 V-----SKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPT 410

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           W  +L +   +G  +      +  H   L P+D S   +L  I
Sbjct: 411 WAALLSSCKRHGNTQMAVR--IADHLLNLKPEDPSSYILLSNI 451


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 204/666 (30%), Positives = 321/666 (48%), Gaps = 91/666 (13%)

Query: 343 AGTDNLNLGQQIHGTTLKS--GFYSAVIVGNSLINMYSKMGCV----------------- 383
           A T NL +G+ IH   + +     +++I  NSLIN Y+K+  V                 
Sbjct: 40  ADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVS 99

Query: 384 -----CGLRTDQFTLASVLRASSSLPEG---------------------LHLSKQIHVHA 417
                 G   + F+L  +      + EG                     +   +Q H   
Sbjct: 100 WSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLL 159

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +K      ++V  AL+ +Y +   + +A  ++      D+  +N+++   + +    + L
Sbjct: 160 LKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGL 219

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           E+   M +   + D++T   A   C  L  L+ G  +H   + S  E D  VSS I++MY
Sbjct: 220 EVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMY 279

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG  + A+ +F+ + + + V WT +++ C  NG  + AL+++ +M    V  +EFT+A
Sbjct: 280 GKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYA 339

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           +L+ A + L+A   G  +H +  K        VG +L++MYAK G+IE A  +F  M  R
Sbjct: 340 VLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHR 399

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           + + WNAM+ G + HG G++ L +F+DM A    P+ VTF GVLSAC + GLV E +   
Sbjct: 400 DIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYL 459

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           H + +++G++P +EHY+ +V  L + G+  EA   + + P +      R LL AC V  +
Sbjct: 460 HHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQN 519

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----- 832
              G+WVAE ++ ++P D   Y LLSNI+A   +WD V   R  M+ K +KK+P      
Sbjct: 520 YGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIE 579

Query: 833 ------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
                                + KV+ L+  IK  GY PD   VL DVE+E+KE  L YH
Sbjct: 580 IGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYH 639

Query: 875 SEKLARAYGLISTPPSSVIL---------------------SNKEPLY--ANRFHHLRDG 911
           SEKLA AYGL+  P  + IL                     +N+  +   ANRFHH RDG
Sbjct: 640 SEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDG 699

Query: 912 MCPCAD 917
            C C D
Sbjct: 700 RCSCLD 705



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 183/373 (49%), Gaps = 13/373 (3%)

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFV--STALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           S+  + L + K IH H I      ++ +    +LI+ Y +   ++ A  LF+     ++ 
Sbjct: 39  SADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVV 98

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAY 517
           +W+A++ GY+L+  S K + L   M + G    +E  +A A+ +C     +++G+Q H  
Sbjct: 99  SWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGL 158

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
            +K+GF     V + ++ MY KC  + DA  ++N++P  D VA+ +++S  V+NG     
Sbjct: 159 LLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREG 218

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L +   M    V  D+ TF       + L  L  G  +H  ++  D   D +V  ++++M
Sbjct: 219 LEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINM 278

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y KCG    A  +F  +  RN VLW A++    Q+G  EE L LF  M+   V+ +  T+
Sbjct: 279 YGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTY 338

Query: 698 IGVLSACSYTGLVSEAYEN-FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
             +L+AC+  GL +    +  H   EK G +  V   + L++   ++G  + A ++   M
Sbjct: 339 AVLLNACA--GLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM 396

Query: 757 PFEASASMHRALL 769
                  MHR ++
Sbjct: 397 -------MHRDII 402



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 214/498 (42%), Gaps = 88/498 (17%)

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV--SGALVNIYSKFGKI 210
           +++ +S L L  LLKL   +  +   +T+H + +      +  +    +L+N Y+K  ++
Sbjct: 23  AVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQV 82

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLGV 269
             A  LFD M ER+VV W  ++  Y  NGF  +V  L  D+   G + P++  +   +  
Sbjct: 83  SIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISS 142

Query: 270 ISDLGKRHEEQVQAYAIKLL---------------LYNNNS---------------NVVL 299
             D G R EE  Q + + L                +Y+  S               ++V 
Sbjct: 143 CCDRG-RVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVA 201

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           +N  LS  ++ G     +E   +M+  +V++D VTF+ A +  A   +L LG  +HG  L
Sbjct: 202 YNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKML 261

Query: 360 KSGFYSAVIVGNSLINMYSKMG------------------------CVC----------- 384
            S       V +++INMY K G                          C           
Sbjct: 262 TSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALN 321

Query: 385 --------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                    +++++FT A +L A + L    + S  +H H+ K+       V  ALI++Y
Sbjct: 322 LFSKMEQENVKSNEFTYAVLLNACAGLSARRNGS-LLHGHSEKSGFKHHVMVGNALINMY 380

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            ++G +  A+ +F +    D+ TWNAMI G+       KAL +F  M  + E  + +T  
Sbjct: 381 AKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFT 440

Query: 497 TAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             + ACG L ++++G       M  + ++ G E   C    I+ +  K G + +A++   
Sbjct: 441 GVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTC----IVSLLSKTGQLNEARNFMR 496

Query: 552 DIPAP-DDVAWTTMISGC 568
             P   D VAW T+++ C
Sbjct: 497 TAPVKWDVVAWRTLLNAC 514



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 47/379 (12%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFL--TNNLMTM 97
           PFL + +  S SS      +L+ +  T +L +GK+ H+ ++ +S+  +  +   N+L+  
Sbjct: 16  PFLLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINF 75

Query: 98  YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT-- 155
           Y++   +  A  LFD+MP+R+++SW++++  Y  +G           ++ R L++ I+  
Sbjct: 76  YAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNG--------FSLKVIRLLKDMISEG 127

Query: 156 --FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               +   LA  +  C   G V      HG  LK G  +  +V  ALV++YSK   +++A
Sbjct: 128 NVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDA 187

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGF---GEEVFH------------------------ 246
             +++ +   D+V +  +L +  ENG+   G EV                          
Sbjct: 188 MGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASL 247

Query: 247 --LFVDLHRSG--LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNK 302
             L + LH  G  L  D E    V   I ++  +  + + A  +   L   + NVVLW  
Sbjct: 248 KDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGL--QSRNVVLWTA 305

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            ++   Q G    A+  F  M + NV+ +  T+ V L A AG      G  +HG + KSG
Sbjct: 306 VMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSG 365

Query: 363 FYSAVIVGNSLINMYSKMG 381
           F   V+VGN+LINMY+K G
Sbjct: 366 FKHHVMVGNALINMYAKSG 384



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 5/214 (2%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           S  DL LG   H ++L S    D ++++ ++ MY +CG  + AR +FD +  R+++ W +
Sbjct: 246 SLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTA 305

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++A+   +G        E   LF  + +    ++  T A LL  C           +HG+
Sbjct: 306 VMASCFQNG-----CFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGH 360

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
           + K G      V  AL+N+Y+K G I  AK +F  M  RD++ W  M+  ++ +G G++ 
Sbjct: 361 SEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKA 420

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
             +F D+  +   P+  +   VL     LG   E
Sbjct: 421 LLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE 454



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 51/367 (13%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST----SDLLLGKSTHARILNSSQIP 86
           L  FSL ++  L+      + S +++  IL  AIS+      +  G+  H  +L +    
Sbjct: 109 LNGFSLKVIRLLKDMISEGNVSPNEY--ILAIAISSCCDRGRVEEGRQCHGLLLKTGFSF 166

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
             ++ N L++MYS+C  +  A  +++++P  D++++NSIL++   +G      + EG  +
Sbjct: 167 HNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY-----LREGLEV 221

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
            RS+        ++T      LC S   +     VHG  L   +  D +VS A++N+Y K
Sbjct: 222 LRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGK 281

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            GK   A+ +FDG+Q R+VVLW  ++ +  +NG  EE  +LF  + +  +  ++ +   +
Sbjct: 282 CGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVL 341

Query: 267 LGVISDLGKR--------HEEQ-------------VQAY--------AIKLLLYNNNSNV 297
           L   + L  R        H E+             +  Y        A K+     + ++
Sbjct: 342 LNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDI 401

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           + WN  + G+   G    A+  F +M+ +    + VTF   L+A             H  
Sbjct: 402 ITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACG-----------HLG 450

Query: 358 TLKSGFY 364
            ++ GFY
Sbjct: 451 LVQEGFY 457


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 192/590 (32%), Positives = 308/590 (52%), Gaps = 89/590 (15%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I  Y +M  V   R ++FT  ++ +A S + + +   +QIH H +K+   +D  + +A I
Sbjct: 118 IYFYGRM--VIDARPNKFTYPTLFKACS-VAQAVQEGRQIHGHVVKHGIGSDVHIKSAGI 174

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y   G + +A  +F + +  D+  WN MI GY+       A  LF+ M          
Sbjct: 175 QMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQM---------- 223

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
                VK  G   ++  G                           K G + DA+ +F+++
Sbjct: 224 ----PVKNIGSWNVMING-------------------------LAKGGNLGDARKLFDEM 254

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D+++W++M+ G +  G    AL I+ QM+     P  F  + ++ A S + A++QGR
Sbjct: 255 SERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGR 314

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            +HA L +     D  +G +L+DMYAKCG ++  + +F++M  R    WNAM+ GLA HG
Sbjct: 315 WVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHG 374

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             E+ L+LF  ++   ++P+ +T +GVL+AC++ G V +    F  MRE YG++PE+EHY
Sbjct: 375 RAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHY 434

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             +VD LGR+G   EA +LI SMP + +A++  ALLGACR+ G+ +  + V + L+ LEP
Sbjct: 435 GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEP 494

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----DL--------------- 834
            +S  YVLLSNI+A   ++DDV+  R  MK + +K  P     DL               
Sbjct: 495 QNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHP 554

Query: 835 ----IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
               I+ K++ + +R++  G+ PDT  VL D++EEEKE A+ YHSEKLA A+GLI+T P 
Sbjct: 555 QMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPG 614

Query: 891 SVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
             I                     + ++E +  +  R+HH ++G C C D
Sbjct: 615 KRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKD 664



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 185/400 (46%), Gaps = 15/400 (3%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +A+K+     N NV +WN  + G L+      AI  +  M+  + + +  T+     A +
Sbjct: 85  FALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACS 143

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               +  G+QIHG  +K G  S V + ++ I MY+  G +   R   ++  S +   +++
Sbjct: 144 VAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTM 203

Query: 404 PEG------LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            +G      L  +K +         V +      +I+   + G++ +A  LF+     D 
Sbjct: 204 IDGYLKCGVLEAAKGLFAQM----PVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +W++M+ GYI +    +ALE+F  M     R     +++ + AC  +  + QG+ +HAY
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
             ++  +LD  + + +LDMY KCG +     +F ++   +   W  MI G   +G  + A
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLV 635
           L ++ +++   + P+  T   ++ A +    +++G +I   + +     DP +     +V
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREF-YGVDPELEHYGCMV 438

Query: 636 DMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           D+  + G   +A  L   M M+ N  +W A+L     HGN
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGN 478



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 147/351 (41%), Gaps = 77/351 (21%)

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKC--GAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           Q+HA  ++SG   D  VS  +L  Y          A  +F+ IP P+   W  +I GC++
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           N +   A+  Y +M +    P++FT+  L KA S   A+++GRQIH +++K    SD  +
Sbjct: 111 NNKLFKAIYFYGRMVIDAR-PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 631 ---GI---------------------------SLVDMYAKCGNIEDAYILFKQMDMRNTV 660
              GI                           +++D Y KCG +E A  LF QM ++N  
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG 229

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WN M+ GLA+ GN  +  KLF++M     E D ++                        
Sbjct: 230 SWNVMINGLAKGGNLGDARKLFDEMS----ERDEIS------------------------ 261

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS---MHRALLGACRVQGD 777
                       +S +VD    AGR KEA E+   M  E +     +  ++L AC   G 
Sbjct: 262 ------------WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 778 TETGKWVAEKLMALE-PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
            + G+WV   L       D+     L +++A   + D       EMK + +
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++   ++ G+L  AR+LFD+M +RD ISW+S++  Y  +G        E   +F+ ++
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGR-----YKEALEIFQQMQ 286

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
              T   R  L+ +L  C + G +     VH Y  +  +  D  +  AL+++Y+K G++ 
Sbjct: 287 REETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLD 346

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
               +F+ M+ER++  W  M+   A +G  E+   LF  L    + P+  ++  VL   +
Sbjct: 347 MGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA 406

Query: 272 DLG 274
             G
Sbjct: 407 HAG 409



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 29/313 (9%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRC--GSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           HA +L S    D +++  L+  Y+     +  +A ++F  +P+ ++  WN ++       
Sbjct: 53  HALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI------- 105

Query: 134 EGNAENVTEGFRLFRSL----RESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
               +   E  +LF+++    R  I    ++ T   L K C  +  V     +HG+ +K 
Sbjct: 106 ----KGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKH 161

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+  D  +  A + +Y+ FG++ +A+ +F    E DVV W  M+  Y + G  E    LF
Sbjct: 162 GIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLF 220

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +    +   +  +   L    +LG          A KL    +  + + W+  + GY+
Sbjct: 221 AQMPVKNIGSWNVMING-LAKGGNLGD---------ARKLFDEMSERDEISWSSMVDGYI 270

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
             G    A+E F  M R   +         LAA +    ++ G+ +H    ++      +
Sbjct: 271 SAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAV 330

Query: 369 VGNSLINMYSKMG 381
           +G +L++MY+K G
Sbjct: 331 LGTALLDMYAKCG 343



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA +  +S   D  L   L+ MY++CG L     +F++M +R++ +WN+++   A 
Sbjct: 313 GRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAI 372

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
              G AE+  E   LF  L+E     + +TL  +L  C  +G+V          L+I   
Sbjct: 373 --HGRAEDALE---LFSKLQEGRMKPNGITLVGVLTACAHAGFV-------DKGLRIFQT 420

Query: 192 WDEFVS--------GALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVML---RAYAENG 239
             EF          G +V++  + G   EA+ L + M  + +  +W  +L   R +    
Sbjct: 421 MREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFD 480

Query: 240 FGEEVFHLFVDL 251
             E V  + ++L
Sbjct: 481 LAERVGKILLEL 492



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC--GNIEDAYILFKQMDMRNTV 660
           S  +T+L+   Q+HA +++     D +V  +L+  YA     N + A  +F  +   N  
Sbjct: 40  SKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVF 99

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHG-----VEPDSVTFIGVLSACSYTGLVSEAYE 715
           +WN ++ G        E  KLF+ +  +G       P+  T+  +  ACS    V E  +
Sbjct: 100 IWNIVIKGCL------ENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQ 153

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
             H    K+GI  +V   S  +      GR ++A ++  S
Sbjct: 154 -IHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS 192


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 200/640 (31%), Positives = 325/640 (50%), Gaps = 94/640 (14%)

Query: 366 AVIVGNSLINMYSKMGC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           +V + N++I  YS++ C            V  ++ D FT   +L+  +     L   K +
Sbjct: 99  SVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK-DMALKYGKVL 157

Query: 414 HVHAIKNDTV-ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
             HA+ +  + ++ FV    I ++   G +  A  +F+  DG+++ TWN ++ GY     
Sbjct: 158 LNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKR 217

Query: 473 SHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGF-ELDLCV 529
             ++  LF  M    E +  + +T+   + AC  L  L  GK ++   +K G  E +L +
Sbjct: 218 YEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLIL 277

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA------------ 577
            + ++DM+  CG M  A+ +F+++   D ++WT++++G  +    DLA            
Sbjct: 278 ENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDY 337

Query: 578 -------------------LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
                              L+++  M++S V PDEFT   ++ A + L ALE G      
Sbjct: 338 VSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTY 397

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           + K    +D F+G +L+DMY KCGN+E A  +F +M  ++   W AM+VGLA +G+GEE 
Sbjct: 398 IDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEA 457

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L +F  M    V PD +T+IGV+ AC++ GLV++    F  M  ++GI+P + HY  +VD
Sbjct: 458 LTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVD 517

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            LGRAG  KEA E+I++MP + ++ +  +LLGACRV  + +  +  A +++ LEP + + 
Sbjct: 518 LLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAV 577

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLI 835
           YVLL NI+AA  +W ++ + R  M  + +KK P                       +  I
Sbjct: 578 YVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEI 637

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-- 893
           +AK+E + + +   GY PDT  V LDV EE+KE ALY HSEKLA AY LIS+     I  
Sbjct: 638 YAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRI 697

Query: 894 -------------------LSNKEPLYAN--RFHHLRDGM 912
                              + N+E +  +  RFHH R G+
Sbjct: 698 VKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 136/588 (23%), Positives = 257/588 (43%), Gaps = 88/588 (14%)

Query: 181 VHGYALKIGLVWDE-FVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           +H   +K GL  +  F++  ++   +K  G +  A+ +FD + +  V +W  M++ Y+  
Sbjct: 54  IHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRI 113

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQ----------------V 281
              E    L+  +    + PD  +   +L G   D+  ++ +                 V
Sbjct: 114 NCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFV 173

Query: 282 QA-------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN- 327
           Q              YA K+    +   VV WN  LSGY +      +   F+ M +   
Sbjct: 174 QKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCE 233

Query: 328 -VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSKMGCVCG 385
            V  +SVT ++ L+A +   +L  G+ I+   +K G     +I+ N+LI+M++  G +  
Sbjct: 234 CVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDA 293

Query: 386 LRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            R   D+     V+  +S                     +   F +T  ID+        
Sbjct: 294 ARGVFDEMKTRDVISWTS---------------------IVTGFANTCRIDL-------- 324

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            A   F+     D  +W AMI GY+  N   + L LF  M  S  + DE T+ + + AC 
Sbjct: 325 -ARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACA 383

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L+ G+    Y  K+  + D  + + ++DMY KCG +  A+ IFN++   D   WT 
Sbjct: 384 HLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTA 443

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL-IKL 622
           MI G  +NG  + AL+++  M  + V PDE T+  ++ A + +  + +G+   +N+ ++ 
Sbjct: 444 MIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQH 503

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKL 681
               +      +VD+  + G++++A  +   M ++ N+++W ++L     H N +     
Sbjct: 504 GIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQ----- 558

Query: 682 FEDMKAHGV---EPDS----VTFIGVLSACSYTGLVSEAYENFHLMRE 722
             +M A+ +   EP++    V    + +AC       + ++N H +R+
Sbjct: 559 LAEMAANEILELEPENGAVYVLLCNIYAAC-------KKWKNLHNVRK 599



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 228/493 (46%), Gaps = 50/493 (10%)

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE-GFRLFRSLRESITFTSRL 160
           G + YAR++FD++P   +  WN+++  Y+        N +E G  L++ +          
Sbjct: 83  GDVYYARKVFDEIPQPSVFIWNTMIKGYSRI------NCSESGVSLYKLMLVHNIKPDGF 136

Query: 161 TLAPLLK-----LCLSSGYVWASETV-HGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
           T   LLK     + L  G V  +  V HG+     L  + FV    ++++S  G +  A+
Sbjct: 137 TFPFLLKGFTKDMALKYGKVLLNHAVIHGF-----LDSNLFVQKGFIHLFSLCGLVNYAR 191

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +FD     +VV W V+L  Y      EE   LF+++ +   C    SV  VL ++S   
Sbjct: 192 KIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVL-MLSACS 250

Query: 275 KRHEEQVQAYAIKLLLYNN-------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           K  ++ V    I    YN          N++L N  +  +   G+   A   F  M   +
Sbjct: 251 KL-KDLVGGKCI----YNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRD 305

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF--YSAVIVGNSLINMYSKMGCV-- 383
           V    +++   +   A T  ++L ++      +  +  ++A+I G   +N + ++  +  
Sbjct: 306 V----ISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFR 361

Query: 384 ----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
                 ++ D+FT+ S+L A + L   L L +    +  KN    D+F+  ALID+Y + 
Sbjct: 362 DMQMSNVKPDEFTMVSILTACAHLG-ALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKC 420

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSHMHTSGERLDEITIAT 497
           G++ +A+ +F      D  TW AMI G  L+NN H  +AL +FS+M  +    DEIT   
Sbjct: 421 GNVEKAKKIFNEMQKKDKFTWTAMIVG--LANNGHGEEALTMFSYMLEASVTPDEITYIG 478

Query: 498 AVKACGCLLMLKQGKQMHA-YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
            + AC  + ++ +GK   +  A++ G + +L     ++D+  + G + +A  +  ++P  
Sbjct: 479 VMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVK 538

Query: 556 PDDVAWTTMISGC 568
           P+ + W +++  C
Sbjct: 539 PNSIVWGSLLGAC 551



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 173/404 (42%), Gaps = 41/404 (10%)

Query: 393 LASVLRASSSLPEG---LHLSKQIHVHAIKNDTVADSFVSTALIDVYC--RNGSMAEAEY 447
           L S +++  SL E    ++   QIH   IK    ++    T +I   C   +G +  A  
Sbjct: 31  LHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARK 90

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +F+      +  WN MI GY   N S   + L+  M     + D  T    +K     + 
Sbjct: 91  VFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMA 150

Query: 508 LKQGKQMHAYAMKSGF-ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
           LK GK +  +A+  GF + +L V  G + ++  CG +  A+ IF+     + V W  ++S
Sbjct: 151 LKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLS 210

Query: 567 GC--VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD- 623
           G       EE   L I  + +   V P+  T  +++ A S L  L  G+ I+   IK   
Sbjct: 211 GYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGI 270

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA------------- 670
              +  +  +L+DM+A CG ++ A  +F +M  R+ + W +++ G A             
Sbjct: 271 VEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFD 330

Query: 671 ------------------QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
                             +    +E L LF DM+   V+PD  T + +L+AC++ G + E
Sbjct: 331 QMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGAL-E 389

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
             E      +K  I+ +    + L+D   + G  ++A ++   M
Sbjct: 390 LGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEM 433



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 27/234 (11%)

Query: 68  DLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           DL+ GK  + + +    + P+  L N L+ M++ CG +  AR +FD+M  RD+ISW SI+
Sbjct: 254 DLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIV 313

Query: 127 AAYAHS--------------------------GEGNAENVTEGFRLFRSLRESITFTSRL 160
             +A++                          G        E   LFR ++ S       
Sbjct: 314 TGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEF 373

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+  +L  C   G +   E    Y  K  +  D F+  AL+++Y K G + +AK +F+ M
Sbjct: 374 TMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEM 433

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           Q++D   W  M+   A NG GEE   +F  +  + + PD+ +   V+   + +G
Sbjct: 434 QKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVG 487



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 19/333 (5%)

Query: 513 QMHAYAMKSGFELD-LCVSSGILDMYVK-CGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           Q+H+  +K+G   + L ++  I+    K  G +  A+ +F++IP P    W TMI G   
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI--HANLIKLDCSSDP 628
               +  +S+Y  M +  + PD FTF  L+K  +   AL+ G+ +  HA +I     S+ 
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHA-VIHGFLDSNL 171

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM--K 686
           FV    + +++ CG +  A  +F   D    V WN +L G  +    EE+ +LF +M  K
Sbjct: 172 FVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKK 231

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
              V P+SVT + +LSACS    +      ++   ++  +EP +   + L+D     G  
Sbjct: 232 CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEM 291

Query: 747 KEAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWVAEKLMALEP-FDSSAYVLL 802
             A  +   M      S    + G    CR+         +A K     P  D  ++  +
Sbjct: 292 DAARGVFDEMKTRDVISWTSIVTGFANTCRID--------LARKYFDQMPERDYVSWTAM 343

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADLI 835
            + +   N++ +V +   +M+  NVK D   ++
Sbjct: 344 IDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMV 376



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 106/515 (20%), Positives = 192/515 (37%), Gaps = 110/515 (21%)

Query: 66  TSDLLLGKSTHARILNSSQIPDRFLTNNLMT------MYSRCGSLVYARRLFDKMPDRDL 119
           T D+ L    + ++L +  +   FL +NL        ++S CG + YAR++FD     ++
Sbjct: 146 TKDMAL---KYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEV 202

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS--RLTLAPLLKLCLSSGYVWA 177
           ++WN +L+ Y        +   E  RLF  + +     S   +TL  +L  C     +  
Sbjct: 203 VTWNVVLSGY-----NRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVG 257

Query: 178 SETVHGYALKIGLVWDEFV-SGALVNIYSKFGKIREAKFLFDGMQ--------------- 221
            + ++   +K G+V    +   AL+++++  G++  A+ +FD M+               
Sbjct: 258 GKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFA 317

Query: 222 ----------------ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
                           ERD V W  M+  Y      +EV  LF D+  S + PD+ ++  
Sbjct: 318 NTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVS 377

Query: 266 VLGVISDLGKRH-EEQVQAYAIK-------------LLLYNNNSNV-------------- 297
           +L   + LG     E  + Y  K             + +Y    NV              
Sbjct: 378 ILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKD 437

Query: 298 -VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
              W   + G    G    A+  F  M+ ++V  D +T++  + A      +  G+    
Sbjct: 438 KFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKH--- 494

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
                 F+S + V + +    +  GC          +  +L  +  L E L +   + V 
Sbjct: 495 ------FFSNMAVQHGIKPNLTHYGC----------MVDLLGRAGHLKEALEVIMNMPVK 538

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
              N  V  S +    +    +   MA  E L       +L   N  +  Y+L  N + A
Sbjct: 539 P--NSIVWGSLLGACRVHKNVQLAEMAANEIL-------ELEPENGAV--YVLLCNIYAA 587

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
            + + ++H   + + E  I    K  GC LM   G
Sbjct: 588 CKKWKNLHNVRKMMMERGIK---KIPGCSLMEMNG 619



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 7/179 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL        L LG+     I  +    D F+ N L+ MY +CG++  A+++F++M  +
Sbjct: 377 SILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKK 436

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D  +W +++   A++G G      E   +F  + E+      +T   ++  C   G V  
Sbjct: 437 DKFTWTAMIVGLANNGHGE-----EALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAK 491

Query: 178 SETVH-GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
            +      A++ G+  +    G +V++  + G ++EA  +   M  + + ++W  +L A
Sbjct: 492 GKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGA 550


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 199/620 (32%), Positives = 306/620 (49%), Gaps = 87/620 (14%)

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           + C   L  + +   S L+  S   E     KQIH   +K   + DS+  T  +  +C +
Sbjct: 4   ISCSFSLEHNLYETMSCLQRCSKQEE----LKQIHARMLKTGLMQDSYAITKFLS-FCIS 58

Query: 440 GSMAE----AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
            + ++    A+ +F+  D  D   WN MI G+  S+   ++L L+  M  S    +  T 
Sbjct: 59  STSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTF 118

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + +KAC  L   ++  Q+HA   K G+E D+   + +++ Y   G    A  +F+ IP 
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIY-------------------------------HQM 584
           PDDV+W ++I G V  G+ D+AL+++                               H+M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           + S V PD  + A  + A + L ALEQG+ IH+ L K     D  +G  L+DMYAKCG +
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEM 298

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           E+A  +FK +  ++   W A++ G A HG+G E +  F +M+  G++P+ +TF  VL+AC
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           SYTGLV E    F+ M   Y ++P +EHY  +VD LGRAG   EA   I  MP + +A +
Sbjct: 359 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             ALL ACR+  + E G+ + E L+A++P+    YV  +NI A   +WD     R  MK 
Sbjct: 419 WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 478

Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           + V K P                        + I +K   + ++++E GYVP+ + +LLD
Sbjct: 479 QGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLD 538

Query: 862 -VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA--- 902
            V+++E+E  ++ HSEKLA  YGLI T P ++I   K                 +Y    
Sbjct: 539 LVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDI 598

Query: 903 -----NRFHHLRDGMCPCAD 917
                 RFHH RDG C C D
Sbjct: 599 VMRDRTRFHHFRDGKCSCGD 618



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 183/391 (46%), Gaps = 35/391 (8%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           +  +  LWN  + G+    +   ++  +  M+ S+  +++ TF   L A +         
Sbjct: 76  DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
           QIH    K G+ + V   NSLIN Y+  G         F LA +L     +PE       
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTG--------NFKLAHLL--FDRIPE------- 178

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
                       D     ++I  Y + G M  A  LF      +  +W  MI GY+ ++ 
Sbjct: 179 -----------PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADM 227

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
           + +AL+LF  M  S    D +++A A+ AC  L  L+QGK +H+Y  K+   +D  +   
Sbjct: 228 NKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV 287

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           ++DMY KCG M +A  +F +I      AWT +ISG   +G    A+S + +M+  G+ P+
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYIL 650
             TF  ++ A S    +E+G+ I  ++ + D +  P +     +VD+  + G +++A   
Sbjct: 348 VITFTAVLTACSYTGLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406

Query: 651 FKQMDMR-NTVLWNAMLVGLAQHGN---GEE 677
            ++M ++ N V+W A+L     H N   GEE
Sbjct: 407 IQEMPLKPNAVIWGALLKACRIHKNIELGEE 437



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 112/528 (21%), Positives = 196/528 (37%), Gaps = 121/528 (22%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDKMPDRDLISWNSILAAY 129
           K  HAR+L +  + D +     ++      S   L YA+ +FD     D   WN ++  +
Sbjct: 31  KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           + S E           L++ +  S    +  T   LLK C +      +  +H    K+G
Sbjct: 91  SCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D +   +L+N Y+  G  + A  LFD + E D V W  +++ Y + G  +    LF 
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
            +                                            N + W   +SGY+Q
Sbjct: 206 KM-----------------------------------------AEKNAISWTTMISGYVQ 224

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
              N  A++ F  M  S+V+ D+V+   AL+A A    L  G+ IH    K+      ++
Sbjct: 225 ADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVL 284

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
           G  LI+MY+K G                     + E L + K I   +++          
Sbjct: 285 GCVLIDMYAKCG--------------------EMEEALEVFKNIKKKSVQ---------- 314

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
                                         W A+I GY    +  +A+  F  M   G +
Sbjct: 315 -----------------------------AWTALISGYAYHGHGREAISKFMEMQKMGIK 345

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQ 547
            + IT    + AC    ++++GK +  Y+M+  + L   +     I+D+  + G + +A+
Sbjct: 346 PNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404

Query: 548 SIFNDIP-APDDVAWTTMISGC-----VDNGEED----LALSIYHQMR 585
               ++P  P+ V W  ++  C     ++ GEE     +A+  YH  R
Sbjct: 405 RFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGR 452



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 26/277 (9%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           SLL + +    S+  ++  + S+L+   + S        HA+I       D +  N+L+ 
Sbjct: 99  SLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLIN 158

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG-------------EGNAENVT-- 141
            Y+  G+   A  LFD++P+ D +SWNS++  Y  +G             E NA + T  
Sbjct: 159 SYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTM 218

Query: 142 -----------EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
                      E  +LF  ++ S      ++LA  L  C   G +   + +H Y  K  +
Sbjct: 219 ISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI 278

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             D  +   L+++Y+K G++ EA  +F  ++++ V  W  ++  YA +G G E    F++
Sbjct: 279 RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFME 338

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
           + + G+ P+  +   VL   S  G   E ++  Y+++
Sbjct: 339 MQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 232/821 (28%), Positives = 374/821 (45%), Gaps = 92/821 (11%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +   +     F  N L+ MY RC SL  AR++FD+M +RD++SW ++++AYA 
Sbjct: 17  GRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQ 76

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +G        +   LF  +  S    +R+T   LL+ C S  ++   + +H     + L+
Sbjct: 77  TGHQR-----QALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLL 131

Query: 192 WDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +  V+ A++ +Y K  +   A  +F  M+ERD++ W   + A AE+G       L   
Sbjct: 132 ESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKS 191

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRH----------------EEQVQAYAIKLLLYNN- 293
           +   G+ PD   V  V  + + +G R                 E  V      + +Y   
Sbjct: 192 MQLEGMAPD--KVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRC 249

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVA 338
                           NVV WN  ++          AIE F  M+  + V+   V+F+  
Sbjct: 250 GCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITV 309

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
           L AV   + L  G++IH    +    S + V N+L+ MY + G V               
Sbjct: 310 LNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDL 369

Query: 384 ------------CGLRTDQFTLASVLRASSSLPE---------------GLHLSKQIHVH 416
                        GL  +   L   +RA    P+                L   + +H  
Sbjct: 370 VSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHL 429

Query: 417 AIKNDTVADSFVSTALIDVYCRNGS--------MAEAEYLFENKDGFDLATWNAMIFGYI 468
           ++++   +   V+ A + +Y    S        M     +FE+    D+ +WN MI GY+
Sbjct: 430 SVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYV 489

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--D 526
            + +S  AL +F  M   G R +++T  + +  C     L+QG+ +H   +    EL  D
Sbjct: 490 QAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSD 549

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             V++ I++MY KCG +  A+ +F D    +  +W +MIS    +G  + A  +  +MR 
Sbjct: 550 PIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRR 609

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
            GV+PD  TF  L+ A     A+  G+ IHA +I      D  V  +LV+ Y+KCGN++ 
Sbjct: 610 EGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDT 669

Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
           A  LF  +D R+ V WN ++ G A +G+  E LK    M+  GV PD++TF+ +LSA S+
Sbjct: 670 ATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSH 729

Query: 707 TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHR 766
            G + +  ++F  M   + +E  VEHY  ++D LGRAGR  +A   + +M  E       
Sbjct: 730 AGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWM 789

Query: 767 ALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
            LL AC V GD E  K VA  ++ + P  SSAYV LSN++A
Sbjct: 790 TLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLYA 830



 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 187/681 (27%), Positives = 300/681 (44%), Gaps = 86/681 (12%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A L++ C  SG +     VHG+  +       F    LVN+Y +   + EA+ +FD M+E
Sbjct: 2   ARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRE 61

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRH 277
           RDVV W  M+ AYA+ G   +   LF ++  S L P+  +   +L         + GK+ 
Sbjct: 62  RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQI 121

Query: 278 EEQVQAY-------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
             +V A                          A+ +       +++ WN  ++   + GD
Sbjct: 122 HARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGD 181

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
               +    +M    +  D VTF+ AL A  G+ +L+ G+ IH   L+ G    V++G +
Sbjct: 182 YTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTA 241

Query: 373 LINMYSKMGCV------------------------CGLRT-------------------- 388
           L+ MY + GC+                        C L                      
Sbjct: 242 LVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEP 301

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
            + +  +VL A ++ PE L   ++IH    +   ++   V+ AL+ +Y R G + +AE +
Sbjct: 302 TRVSFITVLNAVTT-PEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERV 360

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F   +  DL +WNAMI  Y  S  + + + LF  M       D IT   A+ AC  +  L
Sbjct: 361 FSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDL 420

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA--------MVDAQSIFNDIPAPDDVA 560
             G+ +H  +++SGF   + V++  + +Y  C +        M     IF  + A D ++
Sbjct: 421 DSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVIS 480

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W TMI+G V  G+   ALSI+ +M L G+  ++ TF  L+        L QG  IH  +I
Sbjct: 481 WNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVI 540

Query: 621 KL--DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
               + SSDP V  ++V+MY KCG ++ A  LF+    RN   WN+M+   A HG  E+ 
Sbjct: 541 NQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQA 600

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
             L E M+  GV PD VTFI +L+AC   G V    +  H      G+E +    + LV+
Sbjct: 601 FDLSERMRREGVLPDRVTFITLLNACVAGGAVRHG-KMIHARIIDSGLEKDTVVANALVN 659

Query: 739 ALGRAGRTKEAGELILSMPFE 759
              + G    A  L  ++ + 
Sbjct: 660 FYSKCGNLDTATSLFGALDYR 680



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 152/630 (24%), Positives = 270/630 (42%), Gaps = 93/630 (14%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           +F+L+LL  +Q    +    +  + S L   I +  L  G+  HA +L      D  L  
Sbjct: 183 TFTLALLKSMQLEGMAPDKVT--FVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGT 240

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLR 151
            L+TMY RCG L  AR +F +MP+R+++SWN+++A+   +      +  E   LF R + 
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNA-----HFAEAIELFKRMVA 295

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
            ++   +R++   +L    +   +     +H    +  L+    V+ ALV +Y + G + 
Sbjct: 296 VAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVG 355

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           +A+ +F  M+ RD+V W  M+ AYA++G   EV +LF  +    + PD  +    L   +
Sbjct: 356 DAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACA 415

Query: 272 DL-----GKR-HEEQVQAYAIKLLLYNNNS------------------------------ 295
           ++     G+  H   V++     +   N +                              
Sbjct: 416 EIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAA 475

Query: 296 -NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            +V+ WN  ++GY+Q GD+  A+  F  M+   ++ + VTF+  L+       L  G+ I
Sbjct: 476 RDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETI 535

Query: 355 HGTTLKSG--FYSAVIVGNSLINMYSKMG---------------------------CVCG 385
           H   +       S  IV  +++NMY K G                            + G
Sbjct: 536 HRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHG 595

Query: 386 LRTDQFTLASVLRASSSLPE---------------GLHLSKQIHVHAIKNDTVADSFVST 430
                F L+  +R    LP+                +   K IH   I +    D+ V+ 
Sbjct: 596 RAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVAN 655

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           AL++ Y + G++  A  LF   D  D+ +WN +I G+  + ++ +AL+    M   G R 
Sbjct: 656 ALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRP 715

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQS 548
           D IT  T + A      L+QG      +M    EL+  V     ++D+  + G + DA+ 
Sbjct: 716 DAITFLTILSASSHAGFLRQGGD-DFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEY 774

Query: 549 IFNDIPAPD-DVAWTTMISGCVDNGEEDLA 577
             + +   D +V+W T++S C  +G+E+ A
Sbjct: 775 FVSAMRDEDKEVSWMTLLSACEVHGDEERA 804



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 146/278 (52%), Gaps = 3/278 (1%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           A  ++ACG    L+QG+++H +  +   +  L   + +++MY +C ++ +A+ +F+ +  
Sbjct: 2   ARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRE 61

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V+WT MIS     G +  AL ++ +M  S + P+  TF  L++A      LE G+QI
Sbjct: 62  RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQI 121

Query: 616 HANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           HA +  L    SD  V  +++ MY KC   + A  +F +M  R+ + WN  +   A+ G+
Sbjct: 122 HARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGD 181

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
              TL L + M+  G+ PD VTF+  L+AC  +  +S       L+ E+ G+E +V   +
Sbjct: 182 YTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLER-GMEGDVVLGT 240

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
            LV   GR G  + A E+   MP E +     A++ +C
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMP-ERNVVSWNAMVASC 277



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           D++  L  F   LL  ++ +  +       + S+L    S + L  G++ H R++N  Q 
Sbjct: 493 DSFSALSIFKRMLLEGIRGNQVT-------FMSLLSVCDSRAFLRQGETIHRRVIN--QT 543

Query: 86  P----DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           P    D  +   ++ MY +CG L  AR LF+    R+L SWNS+++AYA  G        
Sbjct: 544 PELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAE----- 598

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           + F L   +R       R+T   LL  C++ G V   + +H   +  GL  D  V+ ALV
Sbjct: 599 QAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALV 658

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           N YSK G +  A  LF  +  RDVV W  ++  +A NG   E       + + G+ PD  
Sbjct: 659 NFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAI 718

Query: 262 SVQCVLGVISDLG 274
           +   +L   S  G
Sbjct: 719 TFLTILSASSHAG 731



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           +A L++A     ALEQGR++H ++ +       F G  LV+MY +C ++++A  +F +M 
Sbjct: 1   YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            R+ V W AM+   AQ G+  + L LF +M    ++P+ VTF+ +L AC
Sbjct: 61  ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEAC 109


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 205/615 (33%), Positives = 317/615 (51%), Gaps = 90/615 (14%)

Query: 392 TLASVLRASSSLPEGLHLS---------KQIHVHAIKNDTVADSFVSTALIDVYC---RN 439
           T  S L + S+  + LHL          +QIH   +K   + D   ++ L+  +C    +
Sbjct: 7   TPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLL-AFCASPNS 65

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           GS+A A  +F+     +   WN MI GY  S    +AL L+ HM       +  T    +
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL------------------------- 534
           KAC  +  L++ +Q+HA+ +K GF  ++  ++ +L                         
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 535 ------DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                 D Y KCG +  A  IFN +P  + ++WT+MISGCV  G+   AL+++H+M+ +G
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           +  D       ++A + L  L+QG+ IHA + K +   DP +G  L+DMYAKCG++E+A 
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M+ +   +W AM+ G A HG G E L+ F  M+  GVEP+ +TF G+L+ACS+ G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV EA   F  M   +G +P +EHY  +VD LGRAG  KEA ELI +MP + +A++  AL
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L AC + G+ E GK + + L+ ++P     Y+ L++I AAA +W+     R +MK + V 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 829 KDPADLIFA-----------------------KVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K P   + +                        +E +++R++E GY P    +LLD+E++
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 545

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA-------- 902
           EKE A+++HSEKLA  +GLIST P   I   K                 +YA        
Sbjct: 546 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 605

Query: 903 NRFHHLRDGMCPCAD 917
            RFH  +DG C C D
Sbjct: 606 TRFHLFKDGNCTCGD 620



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 36/322 (11%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           + +T   +L+A SS+   L  ++QIH H IK    ++ + + +L++VY ++G +  A  L
Sbjct: 117 NAYTFPFLLKACSSM-SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLL 175

Query: 449 FENKDGFDLATWNAMIFGY-------------------------------ILSNNSHKAL 477
           F+  D  D  +WN+MI GY                               + +    +AL
Sbjct: 176 FDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEAL 235

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LF  M T+G +LD + + + ++AC  L +L QGK +HAY  K   E+D  +   ++DMY
Sbjct: 236 NLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMY 295

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG + +A  +F  +       WT MISG   +G    AL  + +M+ +GV P++ TF 
Sbjct: 296 AKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFT 355

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDC--SSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A S    + + + +  ++ ++     S    G  +VD+  + G +++A  L + M 
Sbjct: 356 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYG-CMVDLLGRAGLLKEAEELIENMP 414

Query: 656 MR-NTVLWNAMLVGLAQHGNGE 676
           ++ N  +W A+L     HGN E
Sbjct: 415 VKPNAAIWGALLNACHIHGNLE 436



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/540 (21%), Positives = 215/540 (39%), Gaps = 112/540 (20%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS--RCG 102
           S  SS S+++Q   +L+   +  +L   +  H ++L +  I D    + L+   +    G
Sbjct: 10  SQLSSESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSG 66

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           SL YAR +FD++   +   WN+++  Y++S E       E   L+  +       +  T 
Sbjct: 67  SLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPE-----EALLLYHHMLYHSVPHNAYTF 121

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             LLK C S   +  ++ +H + +K+G   + + + +L+N+YSK G I+ A+ LFD + +
Sbjct: 122 PFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ 181

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           RD V W  M+  Y + G  E  + +F  +      P+                       
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHM------PE----------------------- 212

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        N++ W   +SG +  G    A+  F  M  + ++ D+V  +  L A 
Sbjct: 213 ------------RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           A    L+ G+ IH    K       I+G  LI+MY+K G                     
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG--------------------D 300

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L E + + +++    +         V TA+I  Y  +G   E                  
Sbjct: 301 LEEAIEVFRKMEEKGVS--------VWTAMISGYAIHGRGRE------------------ 334

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-S 521
                        ALE F  M T+G   +++T    + AC    ++ + K +     +  
Sbjct: 335 -------------ALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH 381

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSI 580
           GF+  +     ++D+  + G + +A+ +  ++P  P+   W  +++ C  +G  +L   I
Sbjct: 382 GFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441


>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Vitis vinifera]
          Length = 690

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 205/667 (30%), Positives = 341/667 (51%), Gaps = 25/667 (3%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
            ++H + +K+G+  D F +  L+ +Y     +++A+ LFD   ER+V  W  M+ AY+ +
Sbjct: 23  RSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATWTTMISAYSSS 82

Query: 239 GFGEEVFHLFVDLHRS-GLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYNNN 294
           G  +     +V +  S    P+      VL   G++ DL     E  +    ++   N  
Sbjct: 83  GRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDL-----ESGKLIHGRVFRANLG 137

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            + VL N  L  Y++ G    A + F +++  S+  ++++        +   + +NL  Q
Sbjct: 138 FDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLM-EEAVNLFYQ 196

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-----GLRTDQFTLASVLRASSSLPEGLH 408
           +      S  ++++I G         +  VC     GL+ D FT +  L+      + L 
Sbjct: 197 MPEPDTVS--WNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCF-QLLV 253

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD------LATWNA 462
           + KQIH +  K+   +  F ++AL+D Y     + EA  +F+            L  WN+
Sbjct: 254 MVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNS 313

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           M+ GY+++  +  A+ L S +H+ G  +D  T  +A+K C  L   + G Q+   A+ SG
Sbjct: 314 MLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTSG 373

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           +ELD  V S ++D+Y   G + DA  +F  +P  D V W+++IS C   G   L  S++ 
Sbjct: 374 YELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFR 433

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            M    +  D+F  + ++KA S L  L  G+Q+H+  +K    S+     SL+D+YAKCG
Sbjct: 434 DMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCG 493

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            IED   LF     R+TV +  +++G  Q+G   E +  F++M   G++P+ +TF+GVLS
Sbjct: 494 EIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLS 553

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           AC + GLV EA+  F  M+ +Y +EP +EHY  +V+ L +AG  KEA ELI  MPFE   
Sbjct: 554 ACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQ 613

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
           ++  +LLGAC     TE   ++AE+L+   P D S  V LSN++A    WDD    R  +
Sbjct: 614 TIWNSLLGACGTHKKTELVNFIAERLLTTLPEDPSILVTLSNVYATLEMWDDSRKMREVI 673

Query: 823 KRKNVKK 829
           K+  +K+
Sbjct: 674 KKVGMKE 680



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 159/667 (23%), Positives = 269/667 (40%), Gaps = 127/667 (19%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R          G+S HA I+      D F  NNL+ MY     L  ARRLFD+  +R
Sbjct: 8   SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL-APLLKLCLSSGYVW 176
           ++ +W ++++AY+ SG  +        + +  + ES + T    L + +LK C   G + 
Sbjct: 68  NVATWTTMISAYSSSGRPDT-----ALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLE 122

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
           + + +HG   +  L +D  +   L+++Y K G +  A+ +FD +       W  M+  Y 
Sbjct: 123 SGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYG 182

Query: 237 ENGFGEEVFHLFVD------------------------------LHRSGLCPDDESVQCV 266
           + G  EE  +LF                                +HR GL  D  +  C 
Sbjct: 183 KEGLMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCA 242

Query: 267 L---GVISDLGKRHEEQVQAY----------------------------AIKLL-LYNNN 294
           L   G    L     +Q+  Y                            AIK+   Y+  
Sbjct: 243 LKTCGCFQLL--VMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCC 300

Query: 295 SNVVL-----WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           S  +L     WN  LSGY+    N  AI     +       DS TF  AL       N  
Sbjct: 301 SASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFR 360

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMY-------------------------------S 378
           LG Q+ G  + SG+    +VG+ LI++Y                               +
Sbjct: 361 LGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCT 420

Query: 379 KMG------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
           KMG                +  DQF ++SVL+A SSL  GL   KQ+H   +K+   ++ 
Sbjct: 421 KMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLV-GLGSGKQVHSFCVKSGYESER 479

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
              T+LID+Y + G + +   LF      D   +  +I G   +  + +A+  F  M   
Sbjct: 480 ITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIEL 539

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS--GILDMYVKCGAMV 544
           G + +EIT    + AC    ++++   +  Y MK+ ++++  +     I+++  + G   
Sbjct: 540 GLKPNEITFLGVLSACRHAGLVEEAWTIFKY-MKTEYKMEPHIEHYYCIVELLSQAGCFK 598

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
           +A+ +  ++P  PD   W +++  C  + + +L   I    RL   +P++ +  ILV  S
Sbjct: 599 EAEELIAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAE--RLLTTLPEDPS--ILVTLS 654

Query: 604 SCLTALE 610
           +    LE
Sbjct: 655 NVYATLE 661



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 180/431 (41%), Gaps = 52/431 (12%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D   + SV+R         H  + +H H IK     D F +  L+ +Y     + +A  L
Sbjct: 2   DLHRIVSVIRQCGRFRAFRH-GRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLM 507
           F+     ++ATW  MI  Y  S     AL+ +  M  +  E  +    +  +KACG +  
Sbjct: 61  FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L+ GK +H    ++    D  + + +LDMYVKCG++  A+ +F+DI  P   +W TMISG
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISG 180

Query: 568 CVDNGEEDLALSIYHQ------------------------------MRLSGVVPDEFTFA 597
               G  + A+++++Q                              M   G+  D FTF+
Sbjct: 181 YGKEGLMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFS 240

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD-- 655
             +K   C   L   +QIH  + K    S  F   +LVD Y+ C  +++A  +F +    
Sbjct: 241 CALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCC 300

Query: 656 ----MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
               +    LWN+ML G   +      + L   + + G   DS TF   L  C       
Sbjct: 301 SASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCI------ 354

Query: 712 EAYENFHLMREKYGIEP----EVEHY--SFLVDALGRAGRTKEAGELILSMPFEASASMH 765
              +NF L  +  G+      E+++   S L+D     G+ K+A  L   +P E    + 
Sbjct: 355 -NLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLP-EKDIVVW 412

Query: 766 RALLGACRVQG 776
            +L+  C   G
Sbjct: 413 SSLISWCTKMG 423



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 112/215 (52%), Gaps = 5/215 (2%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   I + ++ CG     + G+ +HA+ +K G   D+  ++ +L MYV    + DA+ +
Sbjct: 1   MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSCLTA 608
           F++    +   WTTMIS    +G  D AL  Y QM  S    P+ F ++ ++KA   +  
Sbjct: 61  FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE G+ IH  + + +   D  +  +L+DMY KCG++  A  +F  +   ++  WN M+ G
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISG 180

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
             + G  EE + LF  M     EPD+V++  +++ 
Sbjct: 181 YGKEGLMEEAVNLFYQMP----EPDTVSWNSIIAG 211


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 238/874 (27%), Positives = 390/874 (44%), Gaps = 126/874 (14%)

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
           PL + C +S  +     +H +    GL      S  L+  Y++ G    +K +FD   + 
Sbjct: 6   PLFRRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKP 62

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-------LCPDDESVQCVLGVISDLGKR 276
           D  +W V+++ Y   GF EE   L+ ++           + P         G +S  GK 
Sbjct: 63  DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKV 122

Query: 277 H--------EEQVQAYAIKLLLYNNNS---------------NVVLWNKKLSGYLQVGDN 313
           H        E         L +Y   S               +VV W+  +  ++Q G  
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQA 182

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
              ++ F  MI   V+ DSVT L    A +   +L LG+ +HG  ++    S   + NSL
Sbjct: 183 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSL 242

Query: 374 INMYSKMG-----------CVC--------------------------------GLRTDQ 390
           I MY K+G             C                                 +  +Q
Sbjct: 243 IVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQ 302

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD-SFVSTALIDVYCRNGSMAEAEYLF 449
            T+  VL A + L   +   + +H   I+     +  F+  AL+++Y   G++ +   +F
Sbjct: 303 VTMVGVLCACARLGR-VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVF 361

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           E      + +WN +I  +  +    +AL LF  M T G   D  ++A+++ ACG +   +
Sbjct: 362 ETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQ 421

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
            G Q+H Y +K+G   D  V + ++DMY KCG +  A  +F  I     V W +MI G  
Sbjct: 422 LGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFS 480

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            NG    A++++ QM ++ V  D+ TF  +++A S L  LE+G+ +H  LI      D +
Sbjct: 481 QNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY 540

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +  +L DMY+KCG ++ A+ +F +M  R+ V W+ M+ G   HG    T+ LF  M   G
Sbjct: 541 LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG 600

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           ++P+ +TF+ +LSACS+ G V E    F+ M E +G+EP+ +H++ +VD L RAG    A
Sbjct: 601 IKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGA 659

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
            ++I S+PF A++S+  ALL  CR+    +  K + + L+ ++  D+  Y LLSNI+A  
Sbjct: 660 YQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEE 719

Query: 810 NQWDDVTSARGEMKRKNVKK----------------DPADL-------IFAKVEGLIKRI 846
             WD     R  MK K ++K                 P D        I+  +E     +
Sbjct: 720 GTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLV 779

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------- 893
               Y  + D  ++   +  KE  +  HSEKLA A+G+I+T P + +             
Sbjct: 780 HAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCH 839

Query: 894 --------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                   ++ +E +    NRFH  R+G C C D
Sbjct: 840 SFAKIASKITGREIIMRDLNRFHCFRNGSCSCND 873



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 282/658 (42%), Gaps = 84/658 (12%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           +  L+  Y++ G    ++R+FD  P  D   W  ++  Y   G        E   L+  +
Sbjct: 36  STKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG-----FFEEAVSLYHEM 90

Query: 151 -RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
             +  T  S      +LK C   G +     VHG  +K G   D  V  +L+ +Y +   
Sbjct: 91  VYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSC 150

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + +A   FD M  RDVV W  ++  + +NG   E   +F  +    + PD  ++  V   
Sbjct: 151 LDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEA 210

Query: 270 ISDLGK-RHEEQVQAYAIKLLLYN----NNSNVVL------------------------W 300
            S+LG  R    V  Y ++  + +    NNS +V+                        W
Sbjct: 211 CSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPW 270

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              +S Y Q G    A+  F  M    ++ + VT +  L A A    +  G+ +HG  ++
Sbjct: 271 TPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIR 330

Query: 361 SGFYSAV-IVGNSLINMYSKMG----CVCGLRTDQ-------FTLASVLRASSSLPEGL- 407
                 +  +G +L+ +Y+  G    C     T +        TL S+   +    E L 
Sbjct: 331 RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 390

Query: 408 ------------------------------HLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                                          L  QIH + IK     D FV  ALID+Y 
Sbjct: 391 LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYA 449

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           + G +  A  +FE      L TWN+MI G+  +  S +A+ LF  M+ +  ++D++T  +
Sbjct: 450 KCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 509

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            ++AC  L  L++GK +H   +  G   D  + + + DMY KCG +  A  +F+ +    
Sbjct: 510 VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS 569

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+W+ MI+G   +G+ +  +S+++QM  SG+ P++ TF  ++ A S   A+E+G+    
Sbjct: 570 IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN 629

Query: 618 NL--IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQH 672
           ++    ++   D F    +VD+ ++ G++  AY +   +    N+ +W A+L G   H
Sbjct: 630 SMSEFGVEPKHDHFA--CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIH 685



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 255/597 (42%), Gaps = 81/597 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+      DL +G   H R++      D  +  +L+ MY     L  A + FD MP R
Sbjct: 105 SVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIR 164

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+++W+SI+  +  +G+      +EG  +F  +         +T+  + + C   G +  
Sbjct: 165 DVVAWSSIVLNFVQNGQA-----SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRL 219

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
             +VHGY ++  +  +  ++ +L+ +Y K G +  A+ LF+ +  R    W  M+  Y +
Sbjct: 220 GRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ 279

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK--------- 287
           +G  +E  ++F  +    + P+  ++  VL   + LG+  E   V  + I+         
Sbjct: 280 SGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF 339

Query: 288 -----LLLYNNNSN---------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                + LY +  N               ++ WN  +S + + G    A+  FV M    
Sbjct: 340 LGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQG 399

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
           +  DS +   +L+A        LG QIHG  +K+G ++   V N+LI+MY+K G V    
Sbjct: 400 LMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSAN 458

Query: 384 ------------------CG---------------------LRTDQFTLASVLRASSSLP 404
                             CG                     ++ D+ T  SV++A S L 
Sbjct: 459 KMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLG 518

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             L   K +H   I      DS++ TAL D+Y + G +  A  +F+      + +W+ MI
Sbjct: 519 Y-LEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY +    +  + LF+ M  SG + ++IT    + AC     +++GK       + G E
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVE 637

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSI 580
                 + ++D+  + G +  A  I   +P P + + W  +++GC  +   D+  SI
Sbjct: 638 PKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSI 694


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/603 (31%), Positives = 319/603 (52%), Gaps = 71/603 (11%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR------ 438
           G+  D+    S+LRAS+ L +  +L++ +H   I+     D + + AL+++Y +      
Sbjct: 71  GISPDRHLFPSLLRAST-LFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLS 129

Query: 439 ----------------NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
                           +  +     LF+     D+ +WN +I G   +    +AL +   
Sbjct: 130 PLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKE 189

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M     R D  T+++ +        + +GK++H YA++ GF+ D+ + S ++DMY KC  
Sbjct: 190 MGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQ 249

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +  +   F+ +   D ++W ++I+GCV NG  D  L  + +M    V P + +F+ ++ A
Sbjct: 250 VELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPA 309

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM--RNTV 660
            + LTAL  G+Q+HA +I+L    + F+  SL+DMYAKCGNI+ A  +F +++M  R+ V
Sbjct: 310 CAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMV 369

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W A+++G A HG+  + + LFE+M   GV+P  V F+ VL+ACS+ GLV E ++ F+ M
Sbjct: 370 SWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSM 429

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           +  +G+ P +EHY+ + D LGRAGR +EA + I +M  E + S+   LL ACR   + E 
Sbjct: 430 QRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIEL 489

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
            + V  K++ ++P +  A+V++SNI++AA +W D    R  M++  +KK PA        
Sbjct: 490 AEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGN 549

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                          D I   +  L++++++ GYV DT+ VL DV+EE K   L  HSE+
Sbjct: 550 KVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSER 609

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCP 914
           LA A+G+IST   + I                     +  +E +  +  RFHH ++G C 
Sbjct: 610 LAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCS 669

Query: 915 CAD 917
           C D
Sbjct: 670 CGD 672



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 23/312 (7%)

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W  +I  Y        +L  F+ + + G   D     + ++A          + +HA  +
Sbjct: 44  WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVI 103

Query: 520 KSGFELDLCVSSGILDMYVKC---------------------GAMVDA-QSIFNDIPAPD 557
           + GF  DL  ++ +++MY K                         +D+ + +F+ +P  D
Sbjct: 104 RLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRD 163

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+W T+I+G   NG  + AL++  +M    + PD FT + ++   +    + +G++IH 
Sbjct: 164 VVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHG 223

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             I+     D F+G SL+DMYAKC  +E +   F  +  R+ + WN+++ G  Q+G  ++
Sbjct: 224 YAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQ 283

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L  F  M    V+P  V+F  V+ AC++   ++   +  H    + G +      S L+
Sbjct: 284 GLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLG-KQLHAYIIRLGFDDNKFIASSLL 342

Query: 738 DALGRAGRTKEA 749
           D   + G  K A
Sbjct: 343 DMYAKCGNIKMA 354



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 57/354 (16%)

Query: 80  LNSSQIPDRFLTNNLMTMYSRCG-SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           ++SSQ   R L  N  T+   C    ++A+ +         ++W  I+  YA    G   
Sbjct: 1   MSSSQNVMRSLLRNPNTVVPTCHVKQLHAQIVKTTKATPHSLAWICIIKCYA--SHGLLR 58

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           +    F L RS   S     R     LL+      +   ++++H   +++G  +D + + 
Sbjct: 59  HSLASFNLLRSFGIS---PDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTAN 115

Query: 199 ALVNIYSKFG----------------------KIREAKFLFDGMQERDVVLWKVMLRAYA 236
           AL+N+YSKF                       KI   + LFD M  RDVV W  ++   A
Sbjct: 116 ALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNA 175

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------- 287
           +NG  EE  ++  ++ +  L PD  ++  +L + ++     + +++  YAI+        
Sbjct: 176 QNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVF 235

Query: 288 -----LLLYN---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                + +Y                +N + + WN  ++G +Q G     +  F  M++  
Sbjct: 236 IGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEK 295

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           V+   V+F   + A A    LNLG+Q+H   ++ GF     + +SL++MY+K G
Sbjct: 296 VKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCG 349



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 110/219 (50%), Gaps = 7/219 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL      +++  GK  H   +      D F+ ++L+ MY++C  +  +   F  + +R
Sbjct: 204 SILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNR 263

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ISWNSI+A    +G  +     +G   FR + +      +++ + ++  C     +  
Sbjct: 264 DAISWNSIIAGCVQNGRFD-----QGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNL 318

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRAY 235
            + +H Y +++G   ++F++ +L+++Y+K G I+ A+++F+ ++  +RD+V W  ++   
Sbjct: 319 GKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGC 378

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           A +G   +   LF ++   G+ P   +   VL   S  G
Sbjct: 379 AMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAG 417



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 40/286 (13%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           SL  F     F  S     + S+LR +       L +S HA ++      D +  N LM 
Sbjct: 60  SLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMN 119

Query: 97  MYSR----------------------CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           MYS+                         +   R+LFD+MP RD++SWN+++A       
Sbjct: 120 MYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIA------- 172

Query: 135 GNAEN--VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           GNA+N    E   + + + +        TL+ +L +      V   + +HGYA++ G   
Sbjct: 173 GNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDK 232

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D F+  +L+++Y+K  ++  +   F  +  RD + W  ++    +NG  ++    F  + 
Sbjct: 233 DVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRML 292

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN 293
           +  + P   S   V+   +     +LGK    Q+ AY I+L   +N
Sbjct: 293 KEKVKPMQVSFSSVIPACAHLTALNLGK----QLHAYIIRLGFDDN 334



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 23/224 (10%)

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           AQ +      P  +AW  +I     +G    +L+ ++ +R  G+ PD   F  L++AS+ 
Sbjct: 29  AQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTL 88

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK----------------------CGN 643
                  + +HA +I+L    D +   +L++MY+K                         
Sbjct: 89  FKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVK 148

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           I+    LF +M +R+ V WN ++ G AQ+G  EE L + ++M    + PDS T   +L  
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            +    V++  E  H    ++G + +V   S L+D   +  + +
Sbjct: 209 FTEHANVTKGKE-IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVE 251


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 192/573 (33%), Positives = 297/573 (51%), Gaps = 42/573 (7%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I ++S M    G+R +     S+L++    P  L L KQ+H H I+    A+  V TA+ 
Sbjct: 173 IRLFSDMQ-ASGIRPNSAVYMSLLQSCLG-PSFLELGKQMHSHVIRAQLNANITVETAIC 230

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           ++Y R G +  A+ +F+  D  +  TW  ++ GY  +     ALELF+ M   G  LDE 
Sbjct: 231 NMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEF 290

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
             +  +K C  L     GKQ+H++ +K G E ++ V + ++D YVKCG +  A   F  I
Sbjct: 291 VFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
             P+DV+W+ +ISG   +G  +  + I+  +R  GVV + F +  + +A +    L  G 
Sbjct: 351 SEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGS 410

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q H + IK    S  +   ++V MY+KCG ++ A   F+ +D  + V W A++ G A HG
Sbjct: 411 QAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHG 470

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           N  E L  F  M+++GV P++VTFI VL+ACS++GLV+EA +    M   YG++P ++HY
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY 530

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             ++D   RAG   EA ELI  MPFE  A   ++LLG C    D + GK  AE L  L+P
Sbjct: 531 DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDP 590

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVP 853
            D++ Y+LL N+++A  +W++    R  M  + +KK+     +  V+G + R        
Sbjct: 591 GDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKE-VSCSWISVKGQVHR-------- 641

Query: 854 DTDFVLLDVEEE------EKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY------ 901
                LL+ E++       ++  L  HSEKLA A+GLIST  ++ IL  K          
Sbjct: 642 --PVRLLNEEDDVSCSLPARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHE 699

Query: 902 -----------------ANRFHHLRDGMCPCAD 917
                            + RFHH + G C C D
Sbjct: 700 FGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCND 732



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 158/278 (56%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +   L+ +YC  GS  + + +F+     +L +W  +I  Y  +    KA+ LFS M  SG
Sbjct: 124 IENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R +     + +++C     L+ GKQMH++ +++    ++ V + I +MYV+CG +  A+
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ + A + V WT ++ G     + ++AL ++ +M + GV  DEF F+I++K    L 
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLE 303

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
             + G+QIH++++KL   S+  VG  LVD Y KCG+IE AY  F ++   N V W+A++ 
Sbjct: 304 DWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           G +Q G  E+ +K+F  +++ GV  +S  +  V  AC+
Sbjct: 364 GFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA 401



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 219/536 (40%), Gaps = 111/536 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H R+  + + P   + N L+ MY  CGS +  +++FD+M  ++L+SW  +++AYA 
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAK 165

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +GE     + +  RLF  ++ S    +      LL+ CL   ++   + +H + ++  L 
Sbjct: 166 NGE-----LEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLN 220

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            +  V  A+ N+Y + G +  AK +FDGM  ++ V W  ++  Y +    E    LF  +
Sbjct: 221 ANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARM 280

Query: 252 HRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS----------- 295
              G+  D+     VL V       D+GK    Q+ ++ +KL   +  S           
Sbjct: 281 AMEGVELDEFVFSIVLKVCCXLEDWDMGK----QIHSHIVKLGXESEVSVGTPLVDFYVK 336

Query: 296 -----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            N V W+  +SG+ Q G     I+ F ++    V  +S  +   
Sbjct: 337 CGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSV 396

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
             A A   NLN+G Q HG  +K G  S +   ++++ MYSK G           L    R
Sbjct: 397 FQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCG----------RLDYARR 446

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A  S+ E                   D+   TA+I  Y  +G+ AE              
Sbjct: 447 AFESIDE------------------PDAVAWTAIISGYAYHGNAAE-------------- 474

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM---- 514
                            AL  F  M + G R + +T    + AC    ++ + KQ     
Sbjct: 475 -----------------ALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSM 517

Query: 515 -HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
              Y +K   +   C    ++D Y + G + +A  + N +P  PD ++W +++ GC
Sbjct: 518 SRDYGVKPTIDHYDC----MIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGC 569



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      D  +GK  H+ I+      +  +   L+  Y +CG +  A R F ++ + +
Sbjct: 295 VLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            +SW+++++ ++ SG      + +  ++F SLR      +      + + C +   +   
Sbjct: 355 DVSWSALISGFSQSGR-----LEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMG 409

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
              HG A+K GLV   +   A+V +YSK G++  A+  F+ + E D V W  ++  YA +
Sbjct: 410 SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYH 469

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           G   E    F  +   G+ P+  +   VL   S  G
Sbjct: 470 GNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 149/360 (41%), Gaps = 35/360 (9%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +S+ + S+L+  +  S L LGK  H+ ++ +    +  +   +  MY RCG L  A+ +F
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF 246

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           D M  ++ ++W  ++  Y       A+ +     LF  +            + +LK+C  
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQ-----AKKLEVALELFARMAMEGVELDEFVFSIVLKVCCX 301

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                  + +H + +K+G   +  V   LV+ Y K G I  A   F  + E + V W  +
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDD---ESV--QCVLGVISDLGKR-HEEQVQA-- 283
           +  ++++G  E+   +F  L   G+  +     SV   C      ++G + H + ++   
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421

Query: 284 ---------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                                YA +     +  + V W   +SGY   G+   A+  F  
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS-GFYSAVIVGNSLINMYSKMG 381
           M    V+ ++VTF+  L A + +  +   +Q  G+  +  G    +   + +I+ YS+ G
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 15/181 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ +   + ++L +G   H   +    +   +  + ++TMYS+CG L YARR F+ + + 
Sbjct: 395 SVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEP 454

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ++W +I++ YA+ G     N  E    FR ++      + +T   +L  C  SG V  
Sbjct: 455 DAVAWTAIISGYAYHG-----NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAE 509

Query: 178 SETVHG-----YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
           ++   G     Y +K  +  D +    +++ YS+ G + EA  L + M  E D + WK +
Sbjct: 510 AKQYLGSMSRDYGVKPTI--DHY--DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSL 565

Query: 232 L 232
           L
Sbjct: 566 L 566



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 60/110 (54%)

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           ++  L +A   L +L  GR IH  L +   +    +   L+ MY  CG+  D   +F +M
Sbjct: 89  SYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEM 148

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            M+N V W  ++   A++G  E+ ++LF DM+A G+ P+S  ++ +L +C
Sbjct: 149 LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC 198


>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 195/605 (32%), Positives = 313/605 (51%), Gaps = 80/605 (13%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           DQ  + S+L+ S  + + L     IH   I+N    D F+   L+    +  ++  A  +
Sbjct: 48  DQKQIISLLQRSRHINQVL----PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 103

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     ++  + A+I G++ S N  +A++L+S M       D   +A+ +KACG  L L
Sbjct: 104 FQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLAL 163

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA------------- 555
           ++G+++H+ A+K GF  +  V   I+++Y KCG + DA+ +F ++P              
Sbjct: 164 REGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYS 223

Query: 556 -----------------PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
                             D V WT MI G V N E + AL  +  M+   V P+EFT   
Sbjct: 224 DQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVC 283

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A S L ALE GR +H+ + K +   + FVG +L++MY++CG+I++A  +F +M  R+
Sbjct: 284 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRD 343

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            + +N M+ GL+ +G   + ++LF  M    + P +VTF+GVL+ACS+ GLV   +E FH
Sbjct: 344 VITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFH 403

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M   Y +EP++EHY  +VD LGR GR +EA +LI +M       M   LL AC++  + 
Sbjct: 404 SMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNL 463

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           E G+ VA++L      DS  YVLLS+++A++ +W +    R +MK   ++K+P       
Sbjct: 464 ELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEV 523

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                            + I+ K+E L + ++  GY P+ + VL D+E+ EKE AL  HS
Sbjct: 524 NNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHS 583

Query: 876 EKLARAYGLISTPPSSVI--LSNKEPLY---------------------ANRFHHLRDGM 912
           E+LA  YGLIST P ++I  + N    Y                      NRFH+  +G 
Sbjct: 584 ERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGA 643

Query: 913 CPCAD 917
           C C D
Sbjct: 644 CSCGD 648



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 211/452 (46%), Gaps = 41/452 (9%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA ++  Y +N NV L+   + G++  G+   AI+ +  M+  ++  D+      L A  
Sbjct: 99  YASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACG 158

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               L  G+++H   LK GF S  +V   ++ +Y K G           L    R    +
Sbjct: 159 SQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCG----------ELGDARRVFEEM 208

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           PE               D VA    ST +I  Y   G + EA  +F      D   W AM
Sbjct: 209 PE---------------DVVA----STVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I G++ +  +++ALE F  M     R +E TI   + AC  L  L+ G+ +H+Y  K   
Sbjct: 250 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 309

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           EL+L V + +++MY +CG++ +AQ++F+++   D + + TMISG   NG+   A+ ++  
Sbjct: 310 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 369

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKC 641
           M    + P   TF  ++ A S    ++ G +I  ++ + D   +P +     +VD+  + 
Sbjct: 370 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMAR-DYRVEPQIEHYGCMVDLLGRV 428

Query: 642 GNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTF 697
           G +E+AY L + M M  + ++   +L     H N   GE+  K  ED      + DS T+
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG----QADSGTY 484

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           + +    + +G   EA +    M+E  G++ E
Sbjct: 485 VLLSHVYASSGKWKEAAQVRAKMKEA-GMQKE 515



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 63/357 (17%)

Query: 39  LPFL---QKSHFSSSSS--------SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           LPF     K H +S+S+          Q  S+L+ +   + +L     HA+++ +    D
Sbjct: 24  LPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVL---PIHAQLIRNGHSQD 80

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F+   L+   S+C ++ YA R+F    + ++  + +++  +  SG     N  E  +L+
Sbjct: 81  PFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG-----NYLEAIQLY 135

Query: 148 -RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
            R L ESI   + L +A +LK C S   +     VH  ALK+G   +  V   ++ +Y K
Sbjct: 136 SRMLHESILPDNYL-MASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGK 194

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G++ +A+ +F+ M E DVV   VM+ +Y++ G  EE   +F  + R             
Sbjct: 195 CGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRR------------- 240

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                        + V W   + G+++  + + A+E F  M   
Sbjct: 241 ----------------------------KDTVCWTAMIDGFVRNEETNRALEAFRGMQGE 272

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           NV+ +  T +  L+A +    L +G+ +H    K      + VGN+LINMYS+ G +
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSI 329



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 27/243 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+   S   L  G+  H+R L      +R +   +M +Y +CG L  ARR+F++MP+ 
Sbjct: 152 SILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE- 210

Query: 118 DLISWNSILAAYAHSG---EGNA-----------------------ENVTEGFRLFRSLR 151
           D+++   ++++Y+  G   E  A                       E        FR ++
Sbjct: 211 DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQ 270

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 +  T+  +L  C   G +     VH Y  K  +  + FV  AL+N+YS+ G I 
Sbjct: 271 GENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSID 330

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           EA+ +FD M++RDV+ +  M+   + NG   +   LF  +    L P + +   VL   S
Sbjct: 331 EAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACS 390

Query: 272 DLG 274
             G
Sbjct: 391 HGG 393



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L +G+  H+ +       + F+ N L+ MYSRCGS+  A+ +FD+M DRD+I++N++++ 
Sbjct: 294 LEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISG 353

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALK 187
            + +G+       +   LFR +       + +T   +L  C   G V +  E  H  A  
Sbjct: 354 LSMNGKSR-----QAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARD 408

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
             +       G +V++  + G++ EA  L   M+
Sbjct: 409 YRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 442


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 187/549 (34%), Positives = 293/549 (53%), Gaps = 70/549 (12%)

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
             L+  Y +NG ++EA  +F+     ++ +W AMI GY+      +A  LF        R
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFW-------R 81

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQS 548
           + E  + +     G L+  + G+   A  +     + D+  S+ ++D     G +++A+ 
Sbjct: 82  MPERNVVSWTVMLGGLI--EDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEARE 139

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ-------------MRLSGVVPDEFT 595
           IF+++P  + VAWT+MISG  D+G     + IY +             M+  GV P   +
Sbjct: 140 IFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPS 199

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
              ++     L +L+ GRQ+H+ L++     D +V   L+ MY KCG++  A  +F +  
Sbjct: 200 VISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFS 259

Query: 656 MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
            ++ V+WN+++ G AQHG GE+ L++F DM +  + PD +TFIGVLSACSYTG V E  E
Sbjct: 260 SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLE 319

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
            F  M+ KY ++P+ EHY+ +VD LGRAG+  EA  LI +MP EA A +  ALLGACR  
Sbjct: 320 IFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379

Query: 776 GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
            + +  +  A+KL+ LEP ++  Y+LLSN++++ ++W DV   R  M+ KN++K P    
Sbjct: 380 KNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSW 439

Query: 833 ---------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                ++I  K+  L   ++E GY PD  FV+ DV+EEEK  +L
Sbjct: 440 IEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSL 499

Query: 872 YYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANRFHHL 908
             HSEKLA AYGL+  P   P  V+                  ++ +E +    NRFHH 
Sbjct: 500 RDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHF 559

Query: 909 RDGMCPCAD 917
           +DG+C C+D
Sbjct: 560 KDGLCSCSD 568



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 137/269 (50%), Gaps = 19/269 (7%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG-------------YIL 469
           V D   ST +ID  C  G + EA  +F+     ++  W +MI G             Y  
Sbjct: 115 VKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYER 174

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                +AL LFS M   G R    ++ + +  CG L  L  G+Q+H+  ++S F++D+ V
Sbjct: 175 KGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYV 234

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
           SS ++ MY+KCG +V A+ +F+   + D V W ++I+G   +G  + AL ++H M  S +
Sbjct: 235 SSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSI 294

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIED 646
            PDE TF  ++ A S    +++G +I  ++    ++D  ++ +    +VD+  + G + +
Sbjct: 295 APDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYA--CMVDLLGRAGKLNE 352

Query: 647 AYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           A  L + M +  + ++W A+L     H N
Sbjct: 353 AMNLIENMPVEADAIVWGALLGACRTHKN 381



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 172/389 (44%), Gaps = 34/389 (8%)

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           W+  VSG     Y + G I EA+ +FD M ER+VV W  M+R Y + G  EE   LF  +
Sbjct: 28  WNGLVSG-----YVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRM 82

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
               +     S   +LG + + G+  E      A +L       +VV     + G    G
Sbjct: 83  PERNVV----SWTVMLGGLIEDGRVDE------ARQLFDMMPVKDVVASTNMIDGLCSEG 132

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A E F  M + NV       +   + ++G  +      +     + GF    +   
Sbjct: 133 RLIEAREIFDEMPQRNV-------VAWTSMISGEKDDGTWSTMIKIYERKGFELEALALF 185

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           SL+          G+R    ++ SVL    SL    H  +Q+H   +++    D +VS+ 
Sbjct: 186 SLMQRE-------GVRPSFPSVISVLSVCGSLASLDH-GRQVHSQLVRSQFDIDIYVSSV 237

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LI +Y + G +  A+ +F+     D+  WN++I GY       KALE+F  M +S    D
Sbjct: 238 LITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPD 297

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSI 549
           EIT    + AC     +K+G ++   +MKS +++D      + ++D+  + G + +A ++
Sbjct: 298 EITFIGVLSACSYTGKVKEGLEIFE-SMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNL 356

Query: 550 FNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
             ++P   D + W  ++  C  +   DLA
Sbjct: 357 IENMPVEADAIVWGALLGACRTHKNLDLA 385



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 55/305 (18%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N L++ Y + G +  AR++FDKMP+R+++SW +++  Y   G      + E   LF  + 
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL-----IEEAELLFWRMP 83

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E    +  + L  L++     G V  +  +      +  V D   S  +++     G++ 
Sbjct: 84  ERNVVSWTVMLGGLIE----DGRVDEARQL----FDMMPVKDVVASTNMIDGLCSEGRLI 135

Query: 212 EAKFLFDGMQERDVV-------------LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           EA+ +FD M +R+VV              W  M++ Y   GF  E   LF  + R G+ P
Sbjct: 136 EAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRP 195

Query: 259 DDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYN------------ 292
              SV  VL V   L    H  QV +  ++             + +Y             
Sbjct: 196 SFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVF 255

Query: 293 ---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
              ++ ++V+WN  ++GY Q G    A+E F +M  S++  D +TF+  L+A + T  + 
Sbjct: 256 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVK 315

Query: 350 LGQQI 354
            G +I
Sbjct: 316 EGLEI 320



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 15/270 (5%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNS 82
           F K   RN+ S++  +  ++Q+      +    W    R+ +S + +L G     R+  +
Sbjct: 48  FDKMPERNVVSWTAMIRGYVQEG-LIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEA 106

Query: 83  SQ------IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
            Q      + D   + N++      G L+ AR +FD+MP R++++W S+++     G  +
Sbjct: 107 RQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWS 166

Query: 137 AENVT--------EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
                        E   LF  ++      S  ++  +L +C S   +     VH   ++ 
Sbjct: 167 TMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRS 226

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
               D +VS  L+ +Y K G +  AK +FD    +D+V+W  ++  YA++GFGE+   +F
Sbjct: 227 QFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVF 286

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            D+  S + PD+ +   VL   S  GK  E
Sbjct: 287 HDMFSSSIAPDEITFIGVLSACSYTGKVKE 316



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 43/179 (24%)

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           +A+ +F+ +P  + ++W  ++SG V NG    A  ++ +M    VV              
Sbjct: 12  EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVV-------------- 57

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
             TA+ +G                         Y + G IE+A +LF +M  RN V W  
Sbjct: 58  SWTAMIRG-------------------------YVQEGLIEEAELLFWRMPERNVVSWTV 92

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           ML GL + G  +E  +LF+ M       D V    ++      G + EA E F  M ++
Sbjct: 93  MLGGLIEDGRVDEARQLFDMMPVK----DVVASTNMIDGLCSEGRLIEAREIFDEMPQR 147



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +A  LF +M   NT+ WN ++ G  Q+G   E  K+F+ M    V    V++  ++    
Sbjct: 12  EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV----VSWTAMIRGYV 67

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
             GL+ EA   F  M E+      V  ++ ++  L   GR  EA +L   MP +   +  
Sbjct: 68  QEGLIEEAELLFWRMPER-----NVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAST 122

Query: 766 RALLGAC 772
             + G C
Sbjct: 123 NMIDGLC 129


>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
 gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 305/597 (51%), Gaps = 91/597 (15%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY---LFENKDGFDLATWNAMIFGY 467
           KQIH H IK   +     +  L+  +    +  E +Y    F      +  +WN +I   
Sbjct: 32  KQIHAHFIKTGQIHHPLAAAELLK-FLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRAL 90

Query: 468 -------ILSNNSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
                  +   NS +AL  FSHM T G    ++ T    +KAC  L  +++GKQ+H + +
Sbjct: 91  ADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVV 150

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDA--------------------------------Q 547
           K G   D  V S ++ +YV CGAM DA                                +
Sbjct: 151 KLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASR 210

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +P    V+W  MISGC  NG    A+ ++H M+L  V P+  T   ++ A S L 
Sbjct: 211 ELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLG 270

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAML 666
           A+E G+ +H    K +   D  +G +L+DMY+KCG+I+ A  +F+ + + +N + W+A++
Sbjct: 271 AIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAII 330

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
            GLA HG   + L  F  M+  GV P  V +IGVLSACS+ GLV E    ++ M    G+
Sbjct: 331 GGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGL 390

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P +EHY  +VD LGRAG  +EA +LIL+MP +    + +ALLGAC++ G+ E G+ +A+
Sbjct: 391 LPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAK 450

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
            LM   P DS +YV LSN+FA+   W+ V   R +MK  +++KDP               
Sbjct: 451 ILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFL 510

Query: 832 --------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                   A+ I + +E +  R++  GY P+T  VLL+++E+EK+ AL+YHSEK+A A+G
Sbjct: 511 VEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFG 570

Query: 884 LISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           LIST P + +                     + N++ +  +  RFHH  +G C C D
Sbjct: 571 LISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMD 627



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 171/374 (45%), Gaps = 47/374 (12%)

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           V+ +  TF   L A A    +  G+Q+HG  +K G  S   V ++L+ +Y     +CG  
Sbjct: 119 VEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVY----VMCGAM 174

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D    A VL   + L EG                  +  +   +ID Y R G +  +  
Sbjct: 175 KD----AHVLFYQTRL-EG------------------NVVLWNVMIDGYVRMGDLRASRE 211

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           LF++     + +WN MI G   + +  +A+E+F  M       + +T+ + + A   L  
Sbjct: 212 LFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGA 271

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMIS 566
           ++ GK +H +A K+  E+D  + S ++DMY KCG++  A  +F  I    + + W+ +I 
Sbjct: 272 IELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIG 331

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G   +G    AL  + +M+ +GV P +  +  ++ A S    +E+GR I+ +++ +    
Sbjct: 332 GLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNI---- 387

Query: 627 DPFVGI--------SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN--- 674
              VG+         +VD+  + G +E+A  L   M ++ + V+  A+L     HGN   
Sbjct: 388 ---VGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEM 444

Query: 675 GEETLKLFEDMKAH 688
           GE   K+      H
Sbjct: 445 GERIAKILMGWYPH 458



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 149/379 (39%), Gaps = 68/379 (17%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMY--SRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA  + + QI        L+     S    + YAR+ F ++   +  SWN+I+ A A
Sbjct: 32  KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALA 91

Query: 131 HSGEGNAENVT--EGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            S + +  +V   E    F   L + +   ++ T   +LK C     +   + +HG+ +K
Sbjct: 92  DSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVK 151

Query: 188 IGLVWDEFVSGALVNIYS--------------------------------KFGKIREAKF 215
           +GLV DEFV   LV +Y                                 + G +R ++ 
Sbjct: 152 LGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRE 211

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG- 274
           LFD M  + VV W VM+   A+NG  +E   +F D+    + P+  ++  VL  +S LG 
Sbjct: 212 LFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGA 271

Query: 275 -----------KRHEEQVQAYAIKLLL------------------YNNNSNVVLWNKKLS 305
                      +++E ++       L+                    N  N + W+  + 
Sbjct: 272 IELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIG 331

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK-SGFY 364
           G    G    A++ F  M ++ V    V ++  L+A +    +  G+ I+   +   G  
Sbjct: 332 GLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLL 391

Query: 365 SAVIVGNSLINMYSKMGCV 383
             +     ++++  + GC+
Sbjct: 392 PRIEHYGCMVDLLGRAGCL 410



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 18/270 (6%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N ++  Y R G L  +R LFD MP++ ++SWN +++  A +G     +  E   +F  
Sbjct: 192 LWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNG-----HFKEAIEMFHD 246

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           ++      + +TL  +L      G +   + VH +A K  +  D+ +  AL+++YSK G 
Sbjct: 247 MQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGS 306

Query: 210 IREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
           I +A  +F+G++ +++ + W  ++   A +G   +    F  + ++G+ P D     VL 
Sbjct: 307 IDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLS 366

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN----MI 324
             S  G   E +         +Y +  N+V    ++  Y  + D  G   C       ++
Sbjct: 367 ACSHAGLVEEGRS--------IYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLIL 418

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
              V+ D V     L A     N+ +G++I
Sbjct: 419 NMPVKPDDVILKALLGACKMHGNIEMGERI 448



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSILAAY 129
           LGK  H     +    D  L + L+ MYS+CGS+  A ++F+ + + ++ I+W++I+   
Sbjct: 274 LGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGL 333

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI- 188
           A  G        +    F  ++++    S +    +L  C  +G V    +++ + + I 
Sbjct: 334 AMHGRAR-----DALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIV 388

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENG---FGEEV 244
           GL+      G +V++  + G + EA+ L   M  + D V+ K +L A   +G    GE +
Sbjct: 389 GLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERI 448


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/563 (32%), Positives = 302/563 (53%), Gaps = 54/563 (9%)

Query: 409 LSKQIHVHAIKNDTV--ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           LS  + VH +  D     D F++T LI+++    ++  A  +F+      +  WNA+   
Sbjct: 85  LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRA 144

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKAC---GCLL-MLKQGKQMHAYAMKSG 522
             L+   +  LEL+  M+  G   D  T    +KAC    CL+  L++GK++HA+ ++ G
Sbjct: 145 LALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHG 204

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           +   + V + ++DMY + G +  A ++F+++P  + V+W+ MI+    NG+   AL ++ 
Sbjct: 205 YGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFR 264

Query: 583 QMRLS--GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           +M L+    VP+  T   +++A +   ALEQG+ IHA +++    S   V  +L+ MYA+
Sbjct: 265 EMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYAR 324

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           CG +E   ++F +M  ++ VLWN+++     HG G + +K+FE+M  HG  P  ++FI V
Sbjct: 325 CGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISV 384

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
           L ACS+TGLV E  + F  M +++GI+P VEHY+ +VD LGRA R  EA ++I  +  E 
Sbjct: 385 LGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEP 444

Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
              +  +LLGACR+    E  +  +++L  LEP ++  YVLL++I+A A  WD+V   + 
Sbjct: 445 GPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKK 504

Query: 821 EMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDF 857
            +  + ++K P                        + + A +  L   +K+ GY P T  
Sbjct: 505 LLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKL 564

Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSN 896
           VL D+++EEKER +  HSEKLA A+GLI+T     I                      ++
Sbjct: 565 VLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFAD 624

Query: 897 KEPLYA--NRFHHLRDGMCPCAD 917
           +E +    NRFHH +DG+C C D
Sbjct: 625 REIMVRDLNRFHHFKDGVCSCGD 647



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 163/315 (51%), Gaps = 10/315 (3%)

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADS 426
           GN ++ +Y +M  + G+ +D+FT   +L+A   S  L   L   K+IH H +++   A  
Sbjct: 151 GNDVLELYPRMNMM-GVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHV 209

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM--H 484
            V T L+D+Y R G ++ A  +F+     ++ +W+AMI  Y  +   ++ALELF  M  +
Sbjct: 210 HVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLN 269

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
           T     + +T+ + ++AC     L+QGK +HAY ++ G +  L V S ++ MY +CG + 
Sbjct: 270 THDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLE 329

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
             Q IF+ +   D V W ++IS    +G    A+ I+ +M   G  P   +F  ++ A S
Sbjct: 330 SGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACS 389

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
               +E+G+++  +++K +    P V     +VD+  +   +++A  + + + +     +
Sbjct: 390 HTGLVEEGKKLFESMVK-EHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKV 448

Query: 662 WNAMLVGLAQHGNGE 676
           W ++L     H + E
Sbjct: 449 WGSLLGACRIHCHVE 463



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 13/224 (5%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA IL         +   LM MY+R G + YA  +FD+MP ++++SW++++A YA 
Sbjct: 193 GKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAK 252

Query: 132 SGEGNAENVTEGFRLFRS--LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           +G+       E   LFR   L    +  + +T+  +L+ C +   +   + +H Y L+ G
Sbjct: 253 NGKP-----YEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRG 307

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L     V  AL+ +Y++ GK+   + +FD M ++DVVLW  ++ +Y  +G+G +   +F 
Sbjct: 308 LDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFE 367

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG------KRHEEQVQAYAIK 287
           ++   G  P   S   VLG  S  G      K  E  V+ + I+
Sbjct: 368 EMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQ 411



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 40/309 (12%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D FL   L+ M+S   ++  AR++FDK   R +  WN++  A A +G GN     +   L
Sbjct: 103 DPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGN-----DVLEL 157

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSS----GYVWASETVHGYALKIGLVWDEFVSGALVN 202
           +  +      + R T   LLK C++S     ++   + +H + L+ G      V   L++
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 217

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD--LHRSGLCPDD 260
           +Y++FG +  A  +FD M  ++VV W  M+  YA+NG   E   LF +  L+     P+ 
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277

Query: 261 ESVQCVLGVISDLGKRHEEQ-VQAYAIKL--------------------------LLYN- 292
            ++  VL   +      + + + AY ++                           L+++ 
Sbjct: 278 VTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDR 337

Query: 293 -NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
            +  +VVLWN  +S Y   G    AI+ F  MI        ++F+  L A + T  +  G
Sbjct: 338 MHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEG 397

Query: 352 QQIHGTTLK 360
           +++  + +K
Sbjct: 398 KKLFESMVK 406



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/346 (20%), Positives = 138/346 (39%), Gaps = 56/346 (16%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A K+        + +WN         G  +  +E +  M    V  D  T+   L A   
Sbjct: 123 ARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVA 182

Query: 345 TDNL----NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------- 383
           ++ L      G++IH   L+ G+ + V V  +L++MY++ GCV                 
Sbjct: 183 SECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVS 242

Query: 384 ------CGLRT----------------------DQFTLASVLRASSSLPEGLHLSKQIHV 415
                 C  +                       +  T+ SVL+A ++    L   K IH 
Sbjct: 243 WSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA-ALEQGKLIHA 301

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           + ++    +   V +ALI +Y R G +   + +F+     D+  WN++I  Y L     K
Sbjct: 302 YILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRK 361

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGIL 534
           A+++F  M   G     I+  + + AC    ++++GK++    +K  G +  +   + ++
Sbjct: 362 AIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMV 421

Query: 535 DMYVKCGAMVDAQSIFNDI---PAPDDVAWTTMISGCVDNGEEDLA 577
           D+  +   + +A  I  D+   P P    W +++  C  +   +LA
Sbjct: 422 DLLGRANRLDEAAKIIEDLRIEPGPK--VWGSLLGACRIHCHVELA 465



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 15/182 (8%)

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P + T  +L+ +++   +L     +H  L+      DPF+   L++M+++   +++A  +
Sbjct: 67  PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +   R   +WNA+   LA  G G + L+L+  M   GV  D  T+  +L AC    + 
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC----VA 182

Query: 711 SEAYENF---------HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
           SE   +F         H++R  YG    V   + L+D   R G    A  +   MP +  
Sbjct: 183 SECLVSFLQKGKEIHAHILRHGYGAHVHV--MTTLMDMYARFGCVSYASAVFDEMPVKNV 240

Query: 762 AS 763
            S
Sbjct: 241 VS 242



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 35/236 (14%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           VH   +  G   D F++  L+N++S+   +  A+ +FD  ++R + +W  + RA A  G 
Sbjct: 91  VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150

Query: 241 GEEVFHLFVDLHRSGLCPDDESV----------QCVLGVISDLGKRHEEQVQ-------- 282
           G +V  L+  ++  G+  D  +           +C++  +    + H   ++        
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210

Query: 283 ---------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS- 326
                          +YA  +       NVV W+  ++ Y + G  + A+E F  M+ + 
Sbjct: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270

Query: 327 -NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            +   +SVT +  L A A    L  G+ IH   L+ G  S + V ++LI MY++ G
Sbjct: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 326


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/576 (33%), Positives = 304/576 (52%), Gaps = 48/576 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D+FT  S+L+  + L E   + K +H   +K    +D ++ T L+++Y   G +  A +L
Sbjct: 78  DRFTFPSLLKGCALLLE-FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE     +   W +MI GY+ ++  ++AL L+  M   G   DE+T+AT V AC  L  L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G ++H++  +   ++   + S +++MY KCG +  A+ +F+ +   D  AW+ +I G 
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGY 256

Query: 569 VDNGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           V N     AL ++ ++   S + P+E T   ++ A + L  LE GR +H  + +      
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +  SL+DM++KCG+I+ A  +F  M  ++ + WN+M+ GLA HG G E L  F  M+ 
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQT 376

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             ++PD +TFIGVL+ACS+ GLV E  + F+ +   YG+  + EHY  +VD L RAG   
Sbjct: 377 TDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLA 436

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA E I  MP +   ++  ++LGACRV  + E G+  A  L+ LEP +   Y+LLSNI+A
Sbjct: 437 EAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYA 496

Query: 808 AANQWDDVTSARGEMKRKNVKKDPA------DLI-------------FAKVEGLIKRIKE 848
               W++V   R  M  K ++K P       D I              A++  ++++++E
Sbjct: 497 RRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVRE 556

Query: 849 G----GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSNKE---- 898
                GYV DT  VLL++++ +KE ++  HSEKLA  YGL+ +      VIL N      
Sbjct: 557 KLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSD 616

Query: 899 ---------PLYA--------NRFHHLRDGMCPCAD 917
                     +Y         NRFHH +DG C C D
Sbjct: 617 CHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRD 652



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 51/282 (18%)

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASS 604
           A S+F      D + W +M+   V++     AL  Y +M   S  VPD FTF  L+K  +
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L   + G+ +H  ++K    SD ++  +L++MYA CG+++ A  LF++M  RN V+W +
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC-------------------- 704
           M+ G  ++    E L L++ M+  G  PD VT   ++SAC                    
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 705 ---------------SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
                          +  G +  A + F  + +K     +V  +S L+    +  R+ EA
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDK-----DVYAWSALIFGYVKNNRSTEA 265

Query: 750 GELILSMPFEASASMHR-------ALLGACRVQGDTETGKWV 784
            +L   +   A  S  R       A++ AC   GD ETG+WV
Sbjct: 266 LQLFREV---AGGSNMRPNEVTILAVISACAQLGDLETGRWV 304



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 42/348 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+      +  +GK  H +++      D ++   L+ MY+ CG L  AR LF++M  R
Sbjct: 84  SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + + W S+++ Y  +   N     E   L++ + E       +T+A L+  C     +  
Sbjct: 144 NKVVWTSMISGYMKNHCPN-----EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H +  ++ +     +  ALVN+Y+K G ++ A+ +FD + ++DV  W  ++  Y +
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVK 258

Query: 238 NGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDLG----------------KRHEEQ 280
           N    E   LF ++   S + P++ ++  V+   + LG                K H   
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318

Query: 281 VQAYAIKLL-----------LYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           +    I +            ++++ S  +++ WN  ++G    G    A+  F  M  ++
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTD 378

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ-------IHGTTLKSGFYSAVI 368
           +Q D +TF+  L A +    +  G++       ++G  LKS  Y  ++
Sbjct: 379 LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV 426



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 38/308 (12%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSG--EGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           YA  +F      D+++WNS+L A+ +S       ++ TE     R++ +  TF S     
Sbjct: 30  YAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPS----- 84

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C         + +HG  +K  L  D ++   L+N+Y+  G ++ A+FLF+ M  R
Sbjct: 85  -LLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHE 278
           + V+W  M+  Y +N    E   L+  +   G  PD+ ++  ++   ++L     G +  
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLH 203

Query: 279 EQVQAYAIKLL------LYN------------------NNSNVVLWNKKLSGYLQVGDNH 314
             ++   +K+       L N                  ++ +V  W+  + GY++   + 
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRST 263

Query: 315 GAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            A++ F  +   SN++ + VT L  ++A A   +L  G+ +H    ++    +V + NSL
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323

Query: 374 INMYSKMG 381
           I+M+SK G
Sbjct: 324 IDMFSKCG 331



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 27/214 (12%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+  H  I  + +     L N+L+ M+S+CG +  A+R+FD M  +DLISWNS++ 
Sbjct: 297 DLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVN 356

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-------WASET 180
             A  G G      E    F  ++ +      +T   +L  C  +G V       +  E 
Sbjct: 357 GLALHGLGR-----EALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA 411

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYA 236
           ++G  LK      E   G +V++  + G + EA+     M  + D  +W  ML   R Y 
Sbjct: 412 LYGVRLK-----SEHY-GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYN 465

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
               GEE     ++L      P ++ V  +L  I
Sbjct: 466 NLELGEEAARCLLELE-----PTNDGVYILLSNI 494


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 201/618 (32%), Positives = 327/618 (52%), Gaps = 42/618 (6%)

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           M ERDVV W  ++ A+  NG   +     V + RSG   +   V  ++ V+   G   EE
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLN---VASLVSVVPACGTEQEE 57

Query: 280 Q----VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVT 334
           +    + A A+K+ L   N+ V L N  +  Y + GD   +++ F  M+  N V ++S  
Sbjct: 58  KFGLSIHALAVKVGL---NTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAI 114

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
                                G  L +GFY  V+       M+ KM     +     TL+
Sbjct: 115 ---------------------GCFLNAGFYGDVL------RMFRKMS-EHNVMPGSITLS 146

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           S+L A   L     L +++H ++IK     D FV+ +L+D+Y + GS+ +A  +FE    
Sbjct: 147 SLLPALVELGS-FDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKD 205

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            ++ +WNAMI   + +    +A  L + M  SGE  + IT+   + AC  +  LK GKQ+
Sbjct: 206 RNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQI 265

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           HA++++ G   DL +S+ ++DMY KCG +  A++IF +    DDV++ T+I G   +   
Sbjct: 266 HAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWC 324

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
             +L ++ QMR  G+  D  +F   + A + L+  + G++IH  L++   S  PF+  SL
Sbjct: 325 FESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSL 384

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           +D+Y K G +  A  +F ++  ++   WN M++G   HG  +   +LFE MK  G++ D 
Sbjct: 385 LDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDH 444

Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
           V++I VL+ACS+ GLV +  + F  M  +  IEP+  HY+ +VD LGRAG+  +  E+I 
Sbjct: 445 VSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIR 503

Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
            MPF A++ +  ALLGACR+ G+ E  +W AE L  L+P  S  Y L+ N++A   +W++
Sbjct: 504 DMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNE 563

Query: 815 VTSARGEMKRKNVKKDPA 832
               R  MK + V+K+PA
Sbjct: 564 ANKIRKLMKSRKVQKNPA 581



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 229/543 (42%), Gaps = 92/543 (16%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR----LTLAPLLKLC 169
           MP+RD++SWNS+++A+  +G            +F   R ++    R    L +A L+ + 
Sbjct: 1   MPERDVVSWNSLVSAFLVNG------------MFHDARRALVSMMRSGFPLNVASLVSVV 48

Query: 170 LSSGYVWASE---TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
            + G     +   ++H  A+K+GL     ++ ALV++Y KFG +  +  +FDGM E++ V
Sbjct: 49  PACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEV 108

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYA 285
            W   +  +   GF  +V  +F  +    + P   ++  +L  + +LG      +V  Y+
Sbjct: 109 SWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYS 168

Query: 286 IK----LLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAI 317
           IK    L ++  NS                        NVV WN  ++  +Q G    A 
Sbjct: 169 IKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAF 228

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
               +M +S    +S+T +  L A A   +L +G+QIH  +++ G    + + N+LI+MY
Sbjct: 229 RLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMY 288

Query: 378 SKMGCV------------------------------------------CGLRTDQFTLAS 395
           SK G +                                           G+  D  +   
Sbjct: 289 SKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMG 348

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
            L A ++L    H  K+IH   ++       F+S +L+D+Y + G +  A  +F      
Sbjct: 349 ALSACTNLSVFKH-GKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKK 407

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D+A+WN MI GY +      A ELF  M   G   D ++    + AC    ++ +GK+  
Sbjct: 408 DVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYF 467

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEE 574
           +  +    E      + ++D+  + G +     I  D+P P +   W  ++  C  +G  
Sbjct: 468 SQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNI 527

Query: 575 DLA 577
           +LA
Sbjct: 528 ELA 530



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 33/320 (10%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L+ MY + G +  + ++FD M +++ +SWNS +  +      NA    +  R+FR 
Sbjct: 78  LANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFL-----NAGFYGDVLRMFRK 132

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           + E       +TL+ LL   +  G       VHGY++K  +  D FV+ +LV++Y+KFG 
Sbjct: 133 MSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGS 192

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + +A  +F+ M++R+VV W  M+    +NG   E F L  D+ +SG CP+  ++  VL  
Sbjct: 193 LEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPA 252

Query: 270 ISDLGK-RHEEQVQAYAIK------LLLYN---------------------NNSNVVLWN 301
            + +   +  +Q+ A++I+      L + N                     +  + V +N
Sbjct: 253 CARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDVSYN 312

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             + GY Q      ++  F  M    + YD+V+F+ AL+A         G++IH   ++ 
Sbjct: 313 TLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRR 372

Query: 362 GFYSAVIVGNSLINMYSKMG 381
                  + NSL+++Y+K G
Sbjct: 373 LLSGHPFLSNSLLDLYTKGG 392



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 35/313 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L   +      LG+  H   +  +   D F+ N+L+ MY++ GSL  A  +F++M DR
Sbjct: 147 SLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR 206

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +++SWN+++A    +G   AE  TE FRL   +++S    + +TL  +L  C     +  
Sbjct: 207 NVVSWNAMIANLVQNG---AE--TEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKM 261

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +H ++++ GL++D F+S AL+++YSK G++  A+ +F+   E+D V +  ++  Y++
Sbjct: 262 GKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE-RSEKDDVSYNTLILGYSQ 320

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLL----YN 292
           + +  E   LF  +   G+  D  S    L   ++L   +H +++    ++ LL    + 
Sbjct: 321 SPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFL 380

Query: 293 NNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +NS                        +V  WN  + GY   G    A E F  M    +
Sbjct: 381 SNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGL 440

Query: 329 QYDSVTFLVALAA 341
            YD V+++  LAA
Sbjct: 441 DYDHVSYIAVLAA 453



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +  L+  +QKS      +S    ++L      + L +GK  HA  +    + D F++N L
Sbjct: 227 AFRLVTDMQKS--GECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNAL 284

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MYS+CG L  AR +F++  ++D +S+N+++  Y+ S         E   LF+ +R   
Sbjct: 285 IDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQS-----PWCFESLLLFKQMRSVG 338

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                ++    L  C +       + +H   ++  L    F+S +L+++Y+K G +  A 
Sbjct: 339 IDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTAS 398

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-----GV 269
            +F+ + ++DV  W  M+  Y  +G  +  F LF  +   GL  D  S   VL     G 
Sbjct: 399 KIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGG 458

Query: 270 ISDLGKRHEEQVQAYAIK 287
           + D GK++  Q+ A  I+
Sbjct: 459 LVDKGKKYFSQMVAQNIE 476



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y   P    SLL F Q         +  +   L    + S    GK  H  ++       
Sbjct: 318 YSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGH 377

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            FL+N+L+ +Y++ G LV A ++F+K+  +D+ SWN+++  Y   G+     +   F LF
Sbjct: 378 PFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQ-----IDIAFELF 432

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYV 175
             ++        ++   +L  C   G V
Sbjct: 433 ELMKGDGLDYDHVSYIAVLAACSHGGLV 460


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 211/689 (30%), Positives = 323/689 (46%), Gaps = 111/689 (16%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------CVCGLR---- 387
           L A A   +L  G Q+HG   K GF S  ++GN+LI+MY+K G          G+R    
Sbjct: 224 LRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNV 283

Query: 388 ---------------------------------TDQFTLASVLRASSSLPEGLHLSKQIH 414
                                             +++TL++ L+A   + E +     IH
Sbjct: 284 VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACC-VTEDMGAGVGIH 342

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD-GFDLATWNAMIFGYILSNNS 473
              ++        V+++L+ +Y + G + +A  +F+    G  LATWNAMI GY  + + 
Sbjct: 343 GLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHG 402

Query: 474 HKALELFSHM------HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-- 525
             AL +F  M      H    + DE T A+ +KACG L   ++G Q+HA    SGF    
Sbjct: 403 RDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTAS 462

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           +  ++  ++DMYVKCG +  A  +F  +   + + WTT++ G    G+   AL ++ +  
Sbjct: 463 NAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFW 522

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
            SG   D    + +V   +    +EQGRQ+H   +K    +D   G S+VDMY KCG  +
Sbjct: 523 RSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPD 582

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +A  +F+++  RN V W  M+ GL +HG G E + +FE+M+A GVEPD VT++ +LSACS
Sbjct: 583 EAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACS 642

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           + GLV E    F  +R    + P+ EHY+ +VD LGRAG  +EA +LI +MP E +  + 
Sbjct: 643 HAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVW 702

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
           + LL ACRV  D   G+   + L+A++  +   YV LSN+FA A  W +    R  M+R+
Sbjct: 703 QTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRR 762

Query: 826 NVKKD-----------------PADLIFAKVEGLIKRI---------KEGGYVP-DTDFV 858
            +KK                    D       G I+R+         ++ GY   D  F 
Sbjct: 763 GLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQFA 822

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----------------- 901
           L DV+EE +  +L  HSE+LA    L+          +++P+                  
Sbjct: 823 LHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKG 882

Query: 902 -------------ANRFHHLRDGMCPCAD 917
                        ANRFH    G C C D
Sbjct: 883 LSAVVRRALVVRDANRFHRFEHGTCSCKD 911



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 18/378 (4%)

Query: 393 LASVLRAS---SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
           +A +LRAS   SSL  G+    Q+H    K    +D+ +   LID+Y + G +  A  +F
Sbjct: 220 IADLLRASAKGSSLRGGV----QLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVF 275

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLML 508
                 ++ +W A++ G++   ++   L L   M  + E   +E T++ ++KAC     +
Sbjct: 276 GGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDM 335

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISG 567
             G  +H   +++G+E    V+S ++ +Y K G + DA+ +F+       +A W  MISG
Sbjct: 336 GAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISG 395

Query: 568 CVDNGEEDLALSIYHQMRLSGVV------PDEFTFAILVKASSCLTALEQGRQIHANLIK 621
               G    AL ++ +MR           PDEFTFA L+KA   L A  +G Q+HA +  
Sbjct: 396 YAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAA 455

Query: 622 --LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
                +S+  +  +LVDMY KCG +  A  +F++++ +N + W  ++VG AQ G   E L
Sbjct: 456 SGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEAL 515

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           +LF      G   D+     ++   +   LV +  +  H    K     +V   + +VD 
Sbjct: 516 ELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQ-VHCYGVKSPAGTDVSAGNSIVDM 574

Query: 740 LGRAGRTKEAGELILSMP 757
             + G   EA  +   +P
Sbjct: 575 YLKCGLPDEAERMFREIP 592



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 153/363 (42%), Gaps = 46/363 (12%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR +   S L  G   H  +       D  L NNL+ MY++CG L  A  +F  M DR+
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++SW +++  +   G     + T   RL   +R  S    +  TL+  LK C  +  + A
Sbjct: 283 VVSWTALMVGFLQHG-----DATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGA 337

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD--GMQERDVVLWKVMLRAY 235
              +HG  ++ G      V+ +LV +YSK G+I +A+ +FD  G+  R +  W  M+  Y
Sbjct: 338 GVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLG-RGLATWNAMISGY 396

Query: 236 AENGFGEEVFHLFVDL------HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQA----- 283
           A  G G +   +F ++      H     PD+ +   +L     LG  R   QV A     
Sbjct: 397 AHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAAS 456

Query: 284 -------------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
                                     A+++       N + W   + G+ Q G    A+E
Sbjct: 457 GFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALE 516

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F    RS  + D+      +  +A    +  G+Q+H   +KS   + V  GNS+++MY 
Sbjct: 517 LFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYL 576

Query: 379 KMG 381
           K G
Sbjct: 577 KCG 579



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/498 (20%), Positives = 189/498 (37%), Gaps = 93/498 (18%)

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           R  +A LL+       +     +HG   K+G   D  +   L+++Y+K G++  A  +F 
Sbjct: 217 RKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFG 276

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH-RSGLCPDDESVQCVLG---VISDLG 274
           GM++R+VV W  ++  + ++G       L  ++   S   P++ ++   L    V  D+G
Sbjct: 277 GMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMG 336

Query: 275 -----------KRHEEQVQAYAIKLLLYNNNSNV----------------VLWNKKLSGY 307
                        +EE     +  +LLY+    +                  WN  +SGY
Sbjct: 337 AGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGY 396

Query: 308 LQVGDNHGAIECFVNMIRSNV------QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
              G    A+  F  M R         Q D  TF   L A  G      G Q+H     S
Sbjct: 397 AHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAAS 456

Query: 362 GFYSA--VIVGNSLINMYSKMGCV------------------------------------ 383
           GF +A   I+  +L++MY K G +                                    
Sbjct: 457 GFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALE 516

Query: 384 -------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                   G R D   L+S++   +     +   +Q+H + +K+    D     +++D+Y
Sbjct: 517 LFRRFWRSGARADAHVLSSIVGVLADFAL-VEQGRQVHCYGVKSPAGTDVSAGNSIVDMY 575

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            + G   EAE +F      ++ +W  MI G        +A+ +F  M   G   DE+T  
Sbjct: 576 LKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYL 635

Query: 497 TAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             + AC    ++ + ++  +       ++   E   C    ++D+  + G + +A+ +  
Sbjct: 636 ALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYAC----MVDLLGRAGELREARDLIR 691

Query: 552 DIPAPDDVA-WTTMISGC 568
            +P    V  W T++S C
Sbjct: 692 TMPMEPTVGVWQTLLSAC 709



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 7/205 (3%)

Query: 72  GKSTHARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           G   HA +  S  S   +  L   L+ MY +CG L  A ++F+++  ++ I W +++  +
Sbjct: 446 GAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGH 505

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           A  G+     V E   LFR    S        L+ ++ +      V     VH Y +K  
Sbjct: 506 AQEGQ-----VMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSP 560

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D     ++V++Y K G   EA+ +F  +  R+VV W  M+    ++G G E   +F 
Sbjct: 561 AGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFE 620

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG 274
           ++   G+ PD+ +   +L   S  G
Sbjct: 621 EMRAGGVEPDEVTYLALLSACSHAG 645


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/590 (32%), Positives = 308/590 (52%), Gaps = 89/590 (15%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           I  Y +M  V   R ++FT  ++ +A S + + +   +QIH H +K+   +D  + +A I
Sbjct: 118 IYFYGRM--VIDARPNKFTYPTLFKACS-VAQAVQEGRQIHGHVVKHGIGSDVHIKSAGI 174

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y   G + +A  +F + +  D+  WN MI GY+       A  LF+ M          
Sbjct: 175 HMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQM---------- 223

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
                VK  G   ++  G                           K G + DA+ +F+++
Sbjct: 224 ----PVKNIGSWNVMING-------------------------LAKGGNLGDARKLFDEM 254

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D+++W++M+ G +  G    AL I+ QM+     P  F  + ++ A S + A++QGR
Sbjct: 255 SERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGR 314

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            +HA L +     D  +G +L+DMYAKCG ++  + +F++M  R    WNAM+ GLA HG
Sbjct: 315 WVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHG 374

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             E+ L+LF  ++   ++P+ +T +GVL+AC++ G V +    F  MRE YG++PE+EHY
Sbjct: 375 RAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHY 434

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             +VD LGR+G   EA +LI SMP + +A++  ALLGACR+ G+ +  + V + L+ LEP
Sbjct: 435 GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEP 494

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----DL--------------- 834
            +S  YVLLSNI+A   ++DDV+  R  MK + +K  P     DL               
Sbjct: 495 QNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHP 554

Query: 835 ----IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
               I+ K++ + +R++  G+ PDT  VL D++EEEKE A+ YHSEKLA A+GLI+T P 
Sbjct: 555 QMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPG 614

Query: 891 SVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
             I                     + ++E +  +  R+HH ++G C C D
Sbjct: 615 KRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKD 664



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 186/400 (46%), Gaps = 15/400 (3%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +A+K+     N NV +WN  + G L+      AI  +  M+  + + +  T+     A +
Sbjct: 85  FALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACS 143

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               +  G+QIHG  +K G  S V + ++ I+MY+  G +   R   ++  S +   +++
Sbjct: 144 VAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTM 203

Query: 404 PEG------LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            +G      L  +K +         V +      +I+   + G++ +A  LF+     D 
Sbjct: 204 IDGYLKCGVLEAAKGLFAQM----PVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            +W++M+ GYI +    +ALE+F  M     R     +++ + AC  +  + QG+ +HAY
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
             ++  +LD  + + +LDMY KCG +     +F ++   +   W  MI G   +G  + A
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLV 635
           L ++ +++   + P+  T   ++ A +    +++G +I   + +     DP +     +V
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREF-YGVDPELEHYGCMV 438

Query: 636 DMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           D+  + G   +A  L   M M+ N  +W A+L     HGN
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGN 478



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 17/321 (5%)

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKC--GAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           Q+H   ++SG   D  VS  +L  Y          A  +F+ IP P+   W  +I GC++
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           N +   A+  Y +M +    P++FT+  L KA S   A+++GRQIH +++K    SD  +
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             + + MYA  G +EDA  +F   +  + V WN M+ G  + G  E    LF  M    +
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
              +V   G+       G + +A + F  M E+  I      +S +VD    AGR KEA 
Sbjct: 229 GSWNVMINGLAKG----GNLGDARKLFDEMSERDEIS-----WSSMVDGYISAGRYKEAL 279

Query: 751 ELILSMPFEASAS---MHRALLGACRVQGDTETGKWVAEKLMALE-PFDSSAYVLLSNIF 806
           E+   M  E +     +  ++L AC   G  + G+WV   L       D+     L +++
Sbjct: 280 EIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMY 339

Query: 807 AAANQWDDVTSARGEMKRKNV 827
           A   + D       EMK + +
Sbjct: 340 AKCGRLDMGWEVFEEMKEREI 360



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++   ++ G+L  AR+LFD+M +RD ISW+S++  Y  +G        E   +F+ ++
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGR-----YKEALEIFQQMQ 286

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
              T   R  L+ +L  C + G +     VH Y  +  +  D  +  AL+++Y+K G++ 
Sbjct: 287 REETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLD 346

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
               +F+ M+ER++  W  M+   A +G  E+   LF  L    + P+  ++  VL   +
Sbjct: 347 MGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA 406

Query: 272 DLG 274
             G
Sbjct: 407 HAG 409



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 135/313 (43%), Gaps = 29/313 (9%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRC--GSLVYARRLFDKMPDRDLISWNSILAAYAHSG 133
           H  +L S    D +++  L+  Y+     +  +A ++F  +P+ ++  WN ++       
Sbjct: 53  HGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI------- 105

Query: 134 EGNAENVTEGFRLFRSL----RESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
               +   E  +LF+++    R  I    ++ T   L K C  +  V     +HG+ +K 
Sbjct: 106 ----KGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKH 161

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+  D  +  A +++Y+ FG++ +A+ +F    E DVV W  M+  Y + G  E    LF
Sbjct: 162 GIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLF 220

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +    +   +  +   L    +LG          A KL    +  + + W+  + GY+
Sbjct: 221 AQMPVKNIGSWNVMING-LAKGGNLGD---------ARKLFDEMSERDEISWSSMVDGYI 270

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
             G    A+E F  M R   +         LAA +    ++ G+ +H    ++      +
Sbjct: 271 SAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAV 330

Query: 369 VGNSLINMYSKMG 381
           +G +L++MY+K G
Sbjct: 331 LGTALLDMYAKCG 343



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HA +  +S   D  L   L+ MY++CG L     +F++M +R++ +WN+++   A 
Sbjct: 313 GRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAI 372

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
              G AE+  E   LF  L+E     + +TL  +L  C  +G+V          L+I   
Sbjct: 373 --HGRAEDALE---LFSKLQEGRMKPNGITLVGVLTACAHAGFV-------DKGLRIFQT 420

Query: 192 WDEFVS--------GALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVML---RAYAENG 239
             EF          G +V++  + G   EA+ L + M  + +  +W  +L   R +    
Sbjct: 421 MREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFD 480

Query: 240 FGEEVFHLFVDL 251
             E V  + ++L
Sbjct: 481 LAERVGKILLEL 492



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 14/160 (8%)

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC--GNIEDAYILFKQMDMRNTV 660
           S  +T+L+   Q+H  +++     D +V  +L+  YA     N + A  +F  +   N  
Sbjct: 40  SKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVF 99

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHG-----VEPDSVTFIGVLSACSYTGLVSEAYE 715
           +WN ++ G        E  KLF+ +  +G       P+  T+  +  ACS    V E  +
Sbjct: 100 IWNIVIKGCL------ENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQ 153

Query: 716 NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
             H    K+GI  +V   S  +      GR ++A ++  S
Sbjct: 154 -IHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS 192


>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 760

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 214/688 (31%), Positives = 340/688 (49%), Gaps = 48/688 (6%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D +   A +    K G + EA  +FDGM ERDVV W  M+      GF E+   ++  + 
Sbjct: 57  DVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMV 116

Query: 253 RSGLCPDDESVQCVLGVISD-----LGKR-HEEQVQA----------------------- 283
             G  P   ++  VL   S      +G R H   V+                        
Sbjct: 117 GDGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMV 176

Query: 284 -YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
            Y +++    +  N V +   +SG  +      A+  F  M    VQ D V     L+  
Sbjct: 177 DYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSIS 236

Query: 343 A---GTDNLN------LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
               G D+L+      LG+QIH   L+ GF   + + NSL+ +Y+K   + G       +
Sbjct: 237 VPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEM 296

Query: 394 ASVLRAS-----SSLPEGLHLSKQI-HVHAIKNDTVADSFVSTALIDVYC-RNGSMAEAE 446
             V   S     +   +     K I ++  +++     + V+   I   C R+G +    
Sbjct: 297 PEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGR 356

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F       ++ WNAM+ GY    +  +A+  F  M     + D  T++  + +C  L 
Sbjct: 357 RIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLR 416

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMI 565
            L+ GKQ+H  A+++    D  + SG++ +Y +C  M   + IF+D     D+A W +MI
Sbjct: 417 FLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMI 476

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           SG   N  +  AL ++ +M  + V+ P+E T+AI++ + S L +L  GRQ H  ++K   
Sbjct: 477 SGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGY 536

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            SD FV  ++ DMY KCG IE A   F  +  +NTV+WN M+ G A +G G+E + L+ +
Sbjct: 537 VSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYRE 596

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M + G +PD +TF+ VL+ACS++GLV    E    M+  +GIEPE++HY  +VD LGRAG
Sbjct: 597 MISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAG 656

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
           R ++A  L  + P+++S+ +   LL +CRV GD    + VAEKLM L+P +S+AYVLLSN
Sbjct: 657 RLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLSN 716

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA 832
            +++  QWDD  + +  M +  V K P 
Sbjct: 717 TYSSVRQWDDAAALQELMNKNRVHKTPG 744



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 180/664 (27%), Positives = 303/664 (45%), Gaps = 74/664 (11%)

Query: 71  LGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            G   +AR + +   + D +  N  +T   + G L  A  +FD MP+RD++SWN++++  
Sbjct: 40  FGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVL 99

Query: 130 AHSG-EGNAEN-----VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
              G E  A +     V +GF             SR TLA +L  C            HG
Sbjct: 100 VRKGFEEKALDVYGRMVGDGF-----------LPSRFTLASVLSACSKVQDGVIGMRCHG 148

Query: 184 YALKIGLVWDEFVSGALVNIYSKFG-KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
            A+K GL  + FV  AL+++Y+K G  +     +F+ + E + V +  ++   A      
Sbjct: 149 VAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVL 208

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGV---------ISDL-GKRHEEQVQAYAIK----- 287
           E  H+F  +   G+  D   +  +L +         +S++ G    +Q+ + A++     
Sbjct: 209 EAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVG 268

Query: 288 --------LLLYNNNS---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                   L +Y  N                NVV WN  ++G+ Q   +  +IE    M 
Sbjct: 269 ELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMR 328

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF--YSAVIVGNS-------LIN 375
            S  + + VT +  L A   + ++  G++I  T  +     ++A++ G S        IN
Sbjct: 329 DSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAIN 388

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
            + +M     L+ D+ TL+ +L + + L   L   KQIH  AI+ +T  DS + + LI V
Sbjct: 389 NFRQMQ-FQNLKPDRTTLSVILSSCARL-RFLEGGKQIHGVAIRTETSEDSHIVSGLIAV 446

Query: 436 YCRNGSMAEAEYLFEN-KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEI 493
           Y     M   E +F++  +  D+A WN+MI G   +    KAL LF  MH +   L +E 
Sbjct: 447 YSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNET 506

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T A  + +C  L  L  G+Q H   +KSG+  D  V + + DMY KCG +  A+  F+ +
Sbjct: 507 TYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTV 566

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              + V W  MI G   NG  D A+ +Y +M  +G  PD  TF  ++ A S    ++ G 
Sbjct: 567 SRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGL 626

Query: 614 QIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLA 670
           +I +++ + D   +P +   I +VD   + G +EDA  L +    + ++VLW  +L    
Sbjct: 627 EILSSMQR-DHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSCR 685

Query: 671 QHGN 674
            +G+
Sbjct: 686 VYGD 689



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 253/584 (43%), Gaps = 69/584 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV-YARRLFDKMPD 116
           S+L       D ++G   H   + +    + F+ N L++MY++CG +V Y  R+F+ + +
Sbjct: 129 SVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSE 188

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL------CL 170
            + +S+ +++     SG      V E   +FR + E       + L+ +L +      C 
Sbjct: 189 PNEVSFTTVI-----SGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCD 243

Query: 171 SSGYVWAS---ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           S   ++ +   + +H  AL+ G V +  ++ +L+ IY+K   +  A+ +F  M E +VV 
Sbjct: 244 SLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVS 303

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
           W +M+  + +    ++       +  SG  P++ +   +LG     G     +      +
Sbjct: 304 WNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGR------R 357

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
           +       +V  WN  LSGY        AI  F  M   N++ D  T  V L++ A    
Sbjct: 358 IFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRF 417

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----CVC------------------- 384
           L  G+QIHG  +++       + + LI +YS+      C C                   
Sbjct: 418 LEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMIS 477

Query: 385 GLR----------------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
           GLR                       ++ T A VL + S L   +H  +Q H   +K+  
Sbjct: 478 GLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVH-GRQFHGQVVKSGY 536

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V+DSFV TA+ D+YC+ G +  A   F+     +   WN MI GY  +    +A++L+  
Sbjct: 537 VSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYRE 596

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCG 541
           M ++GE+ D IT  + + AC    ++  G ++ +   +  G E +L     I+D   + G
Sbjct: 597 MISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAG 656

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            + DA+++    P     V W  ++S C   G+  LA  +  ++
Sbjct: 657 RLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKL 700



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 21/351 (5%)

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
           ++ D +   A +   C+ G + EA  +F+     D+ +WN MI   +      KAL+++ 
Sbjct: 54  SLRDVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYG 113

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M   G      T+A+ + AC  +     G + H  A+K+G + ++ V + +L MY KCG
Sbjct: 114 RMVGDGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 173

Query: 542 AMVD-AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL---SGVVPD----E 593
            MVD    +F  +  P++V++TT+ISG      E+  L   H  RL    GV  D     
Sbjct: 174 FMVDYGVRVFESLSEPNEVSFTTVISGL---ARENKVLEAVHMFRLMCEKGVQVDCVCLS 230

Query: 594 FTFAILVKASSCLTALE-----QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
              +I V    C +  E      G+QIH+  ++     +  +  SL+++YAK  ++  A 
Sbjct: 231 NILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAE 290

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
           ++F +M   N V WN M+ G  Q    +++++  + M+  G EP+ VT I +L AC  +G
Sbjct: 291 LIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSG 350

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            V      F+ +      +P V  ++ ++         +EA      M F+
Sbjct: 351 DVETGRRIFNTIP-----QPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQ 396



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 189/427 (44%), Gaps = 52/427 (12%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDS-VTFLVALAAVAGTDNLNLG 351
           NS+  L N+ L  Y++ GD   A + F  M +R    +++ +TF   +  +     +  G
Sbjct: 24  NSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACEVFDG 83

Query: 352 QQIHGTTLKSGFYSAVI---VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
                    +   S ++        +++Y +M    G    +FTLASVL A S + +G+ 
Sbjct: 84  MPERDVVSWNNMISVLVRKGFEEKALDVYGRM-VGDGFLPSRFTLASVLSACSKVQDGV- 141

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE-AEYLFENKDGFDLATWNAMIFGY 467
           +  + H  A+K     + FV  AL+ +Y + G M +    +FE+    +  ++  +I G 
Sbjct: 142 IGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGL 201

Query: 468 ILSNNSHKALELFSHMHTSGERLDEI------TIATAVKACGCLLMLKQ---GKQMHAYA 518
              N   +A+ +F  M   G ++D +      +I+   + C  L  +     GKQ+H+ A
Sbjct: 202 ARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLA 261

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
           ++ GF  +L +++ +L++Y K   M  A+ IF ++P  + V+W  MI+G       D ++
Sbjct: 262 LRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSI 321

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
               +MR SG  P+E T                                    IS++   
Sbjct: 322 EYLKRMRDSGFEPNEVTC-----------------------------------ISILGAC 346

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
            + G++E    +F  +   +   WNAML G + + + EE +  F  M+   ++PD  T  
Sbjct: 347 FRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLS 406

Query: 699 GVLSACS 705
            +LS+C+
Sbjct: 407 VILSSCA 413



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 168/405 (41%), Gaps = 77/405 (19%)

Query: 520 KSGFELDLCVSSGILDMYV-------------------------------KCGAMVDAQS 548
           ++G   D  + + +LD+Y+                               K G + +A  
Sbjct: 20  RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+ +P  D V+W  MIS  V  G E+ AL +Y +M   G +P  FT A ++ A S +  
Sbjct: 80  VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI-LFKQMDMRNTVLWNAMLV 667
              G + H   +K     + FVG +L+ MYAKCG + D  + +F+ +   N V +  ++ 
Sbjct: 140 GVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVIS 199

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS------ACS---------------- 705
           GLA+     E + +F  M   GV+ D V    +LS       C                 
Sbjct: 200 GLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHS 259

Query: 706 ---YTGLVSEAYENFHLM------REKYGIE------PEVE--HYSFLVDALGRAGRTKE 748
                G V E + N  L+      ++  G E      PEV    ++ ++   G+  R+ +
Sbjct: 260 LALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDK 319

Query: 749 AGELILSMP---FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
           + E +  M    FE +     ++LGAC   GD ETG+ +   +   +P  S+   +LS  
Sbjct: 320 SIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIP--QPSVSAWNAMLSG- 376

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGG 850
           ++    +++  +   +M+ +N+K D   L          R  EGG
Sbjct: 377 YSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGG 421


>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/544 (33%), Positives = 281/544 (51%), Gaps = 46/544 (8%)

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           ND     F+   + D   RNG  + A    + +   +    N+MI  Y+  N    +L +
Sbjct: 17  NDVRRGHFLMKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYI 76

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F+ MH      D  T    +KA   L     GK +H   ++ GF  D+  S+ ++ +Y  
Sbjct: 77  FALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCT 136

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           C ++ DA  +F+++P  + V W  +I+G   N +   A+  +  M   G  P E T  ++
Sbjct: 137 CLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVV 196

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A S L A  QG+ IH  +       + FVG +L+DMYAKCG + +   +F+++  +N 
Sbjct: 197 LSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNV 256

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
             WN ++ G A +G G+  L+ F  M     +PD VTF+GVL AC + GLV+E    F  
Sbjct: 257 YTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMS 316

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M++++G++P +EHY  +VD LGRAG  +EA ELI SM  E    + RALL ACRV G+T+
Sbjct: 317 MKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTK 376

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
            G+++ ++L+ LEP +   YVLLSNI++   +W +V   RG M  + ++K P        
Sbjct: 377 LGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEIN 436

Query: 833 ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                           + I+ +++ LIK++KE GYV  TD  L D+E+EEKE ++ YHSE
Sbjct: 437 NVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSE 496

Query: 877 KLARAYGLISTPPSSV------------------ILSNKEPLYA-----NRFHHLRDGMC 913
           KLA A+GL+++P                      +LS     Y      NRFHH  +G C
Sbjct: 497 KLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFC 556

Query: 914 PCAD 917
            C D
Sbjct: 557 SCRD 560



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 8/309 (2%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D  T  +VL+A++ L +   + K IH   I+   + D + STAL+ +YC   S+++A  L
Sbjct: 88  DSSTFPAVLKATAQLCD-TGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQL 146

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     +  TWNA+I GY  +    KA++ F  M   G +  E T+   + AC  L   
Sbjct: 147 FDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAF 206

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            QGK +H +   +   L++ V + ++DMY KCGA+ + + +F +I   +   W  +ISG 
Sbjct: 207 NQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGY 266

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG+ D AL  + +M +    PDE TF  ++ A      + +GR    ++ K      P
Sbjct: 267 AMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSM-KQQFGLQP 325

Query: 629 FVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLF 682
            +     +VD+  + G +E+A  L + M +  + ++W A+L     HGN   GE  +K  
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385

Query: 683 EDMKAHGVE 691
            +++ +  E
Sbjct: 386 IELEPNNGE 394



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 5/261 (1%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           TY +L     SL  F     FS    SS + ++L+      D  +GK  H  ++    I 
Sbjct: 63  TYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFIC 122

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D + +  L+ +Y  C S+  A +LFD+MP+R+ ++WN+++  Y H+         +    
Sbjct: 123 DVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHN-----RKFVKAIDA 177

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           FR +       S  T+  +L  C   G     + +H +     L  + FV  AL+++Y+K
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + E + +F+ ++E++V  W V++  YA NG G+     F  +      PD+ +   V
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297

Query: 267 LGVISDLGKRHEEQVQAYAIK 287
           L      G   E + Q  ++K
Sbjct: 298 LCACCHQGLVTEGRWQFMSMK 318



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 137/343 (39%), Gaps = 54/343 (15%)

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
           Y  + N    N  +  YL +  +  ++  F  M + ++  DS TF   L A A   +  +
Sbjct: 48  YRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGV 107

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------------- 384
           G+ IHG  ++ GF   V    +L+++Y    C C                          
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLY----CTCLSISDASQLFDEMPERNAVTWNALIT 163

Query: 385 ---------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                                G +  + T+  VL A S L    +  K IH     N   
Sbjct: 164 GYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLG-AFNQGKWIHEFIYHNRLR 222

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            + FV TALID+Y + G++ E E +FE     ++ TWN +I GY ++     AL+ FS M
Sbjct: 223 LNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRM 282

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGK-QMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
                + DE+T    + AC    ++ +G+ Q  +   + G +  +     ++D+  + G 
Sbjct: 283 LMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGL 342

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           + +A  +   +   PD + W  ++  C  +G   L   I  ++
Sbjct: 343 LEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/566 (34%), Positives = 290/566 (51%), Gaps = 51/566 (9%)

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           AS SL  G  L  ++ V  +  DTV    +ST L+D+Y   G +  A  LF+     ++ 
Sbjct: 74  ASGSLRAGRQLHGRLLVSGLGPDTV----LSTKLVDLYAACGQVGHARRLFDGMPKRNVF 129

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
            WN +I  Y        A+ L+  M   G   D  T    +KAC  LL L+ G+++H   
Sbjct: 130 LWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRV 189

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
             + +  D+ V +G++DMY KCG + DA+++F+ I   D V W +MI+    NG    AL
Sbjct: 190 SGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEAL 249

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
           ++   M  +G+ P   T    V A++   AL +GR++H    +        +  SLVDMY
Sbjct: 250 ALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMY 309

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTF 697
           AK G ++ A +LF+Q+  R  V WNAM+ G   HG+ +E L LF  MK    V PD++TF
Sbjct: 310 AKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITF 369

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +GVLSAC++ G+V EA E F+LM   Y I+P V+HY+ ++D LG  GR +EA +LI  M 
Sbjct: 370 VGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMS 429

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            E  + +  ALL  C++  + E G+   +KL+ LEP D+  YV LSNI+A + +W+    
Sbjct: 430 IEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAAR 489

Query: 818 ARGEMKRKNVKK-----------------------DPADLIFAKVEGLIKRIKEGGYVPD 854
            R  M  + +KK                         +D I+ ++E L   + + GYVPD
Sbjct: 490 VRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPD 549

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY------------- 901
              V  +V+++EK   +  HSE+LA A+GLISTPP + +L  K                 
Sbjct: 550 IIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQ 609

Query: 902 ----------ANRFHHLRDGMCPCAD 917
                      NR+HH  +G C C D
Sbjct: 610 IVQREIIIRDVNRYHHFVNGECSCKD 635



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 9/236 (3%)

Query: 27  TYRNLP---SFSLSLLPFLQKSHFSSSSSS-SQWFSILRHAISTSDLLLGKSTHARILNS 82
           T R LP    F+ S  P       +SS  +     SIL+  +++  L  G+  H R+L S
Sbjct: 32  TARALPPNTGFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVS 91

Query: 83  SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
              PD  L+  L+ +Y+ CG + +ARRLFD MP R++  WN ++ AYA  G   A     
Sbjct: 92  GLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREA----- 146

Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
             RL+R + E        T   +LK C +   +     VH          D FV   +V+
Sbjct: 147 AVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVD 206

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           +Y+K G + +A+ +FDG+  RD V+W  M+ AY +NG   E   L  D+  +G+ P
Sbjct: 207 MYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGP 262



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 12/236 (5%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+   +  DL  G+  H R+  +    D F+   ++ MY++CG +  AR +FD +  RD
Sbjct: 169 VLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRD 228

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + WNS++AAY  +G        E   L R +  +    +  TL   +     +  +   
Sbjct: 229 AVVWNSMIAAYGQNGR-----PMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRG 283

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +HG+  + G    + +  +LV++Y+K G ++ A+ LF+ + +R++V W  M+  Y  +
Sbjct: 284 RELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMH 343

Query: 239 GFGEEVFHLFVDLHRSG-LCPDDESVQCVLGVISDLGKRHEEQ------VQAYAIK 287
           G  +E   LF  +     + PD+ +   VL   +  G   E +      V AY+IK
Sbjct: 344 GHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIK 399



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +L+ C++SG + A   +HG  L  GL  D  +S  LV++Y+  G++  A+ LFDGM +R+
Sbjct: 68  ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL----------- 273
           V LW V++RAYA  G  E    L+  +   G+ PD+ +   VL   + L           
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187

Query: 274 ---GKRHEEQVQAYAIKLLLYNNNSNV---------------VLWNKKLSGYLQVGDNHG 315
              G R  + V   A  + +Y     V               V+WN  ++ Y Q G    
Sbjct: 188 RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPME 247

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
           A+    +M  + +     T + A++A A    L  G+++HG   + GF     +  SL++
Sbjct: 248 ALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVD 307

Query: 376 MYSKMGCV 383
           MY+K G V
Sbjct: 308 MYAKSGWV 315


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/576 (32%), Positives = 303/576 (52%), Gaps = 48/576 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D+FT  S+L+  + L E   + K +H   +K    +D ++ T L+++Y   G +  A +L
Sbjct: 78  DRFTFPSLLKGCALLLE-FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE     +   W +MI GY+ ++  ++AL L+  M   G   DE+T+AT V AC  L  L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G ++H++  +   ++   + S +++MY KCG +  A+ +F+ +   D  AW+ +I G 
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGY 256

Query: 569 VDNGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           V N     AL ++ ++   S + P+E T   ++ A + L  LE GR +H  + +      
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +  SL+DM++KCG+I+ A  +F  M  ++ + WN+M+ G A HG G E L  F  M+ 
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQT 376

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             ++PD +TFIGVL+ACS+ GLV E  + F+ +   YG+  + EHY  +VD L RAG   
Sbjct: 377 TDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLA 436

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA E I  MP +   ++  ++LGACRV  + E G+  A  L+ LEP +   Y+LLSNI+A
Sbjct: 437 EAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYA 496

Query: 808 AANQWDDVTSARGEMKRKNVKKDPA------DLI-------------FAKVEGLIKRIKE 848
               W++V   R  M  K ++K P       D I              A++  ++++++E
Sbjct: 497 KRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVRE 556

Query: 849 ----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSNKE---- 898
                GYV DT  VLL++++ +KE ++  HSEKLA  YGL+ +      VIL N      
Sbjct: 557 KLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSD 616

Query: 899 ---------PLYA--------NRFHHLRDGMCPCAD 917
                     +Y         NRFHH +DG C C D
Sbjct: 617 CHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRD 652



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 167/315 (53%), Gaps = 5/315 (1%)

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLL 506
           +F +    D+ TWN+M+  ++ SN   +AL+ ++ M      + D  T  + +K C  LL
Sbjct: 34  VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
             K GK +H   +K     DL + + +L+MY  CG +  A+ +F  +   + V WT+MIS
Sbjct: 94  EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
           G + N   + AL +Y +M   G  PDE T A LV A + L  L  G ++H+++ ++D   
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213

Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
              +G +LV+MYAKCG+++ A  +F ++  ++   W+A++ G  ++    E L+LF ++ 
Sbjct: 214 CAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVA 273

Query: 687 -AHGVEPDSVTFIGVLSACSYTG-LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
               + P+ VT + V+SAC+  G L +  + + ++ R + G    V   + L+D   + G
Sbjct: 274 GGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKG--HSVSLNNSLIDMFSKCG 331

Query: 745 RTKEAGELILSMPFE 759
               A  +  SM ++
Sbjct: 332 DIDAAKRIFDSMSYK 346



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 51/282 (18%)

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASS 604
           A S+F      D + W +M+   V++     AL  Y +M   S  VPD FTF  L+K  +
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            L   + G+ +H  ++K    SD ++  +L++MYA CG+++ A  LF++M  RN V+W +
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC-------------------- 704
           M+ G  ++    E L L++ M+  G  PD VT   ++SAC                    
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 705 ---------------SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
                          +  G +  A + F  + +K     +V  +S L+    +  R+ EA
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDK-----DVYAWSALIFGYVKNNRSTEA 265

Query: 750 GELILSMPFEASASMHR-------ALLGACRVQGDTETGKWV 784
            +L   +   A  S  R       A++ AC   GD ETG+WV
Sbjct: 266 LQLFREV---AGGSNMRPNEVTILAVISACAQLGDLETGRWV 304



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 155/348 (44%), Gaps = 42/348 (12%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+      +  +GK  H +++      D ++   L+ MY+ CG L  AR LF++M  R
Sbjct: 84  SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + + W S+++ Y  +   N     E   L++ + E       +T+A L+  C     +  
Sbjct: 144 NKVVWTSMISGYMKNHCPN-----EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
              +H +  ++ +     +  ALVN+Y+K G ++ A+ +FD + ++DV  W  ++  Y +
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVK 258

Query: 238 NGFGEEVFHLFVDLH-RSGLCPDDESVQCVLGVISDLG----------------KRHEEQ 280
           N    E   LF ++   S + P++ ++  V+   + LG                K H   
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318

Query: 281 VQAYAIKLL-----------LYNNNS--NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
           +    I +            ++++ S  +++ WN  ++G+   G    A+  F  M  ++
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD 378

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ-------IHGTTLKSGFYSAVI 368
           +Q D +TF+  L A +    +  G++       ++G  LKS  Y  ++
Sbjct: 379 LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV 426



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 9/274 (3%)

Query: 18  VIFSSFTKDTYRN-LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           V+++S      +N  P+ +L L   +++  FS    +    +++       DL +G   H
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA--TLVSACAELKDLGVGMKLH 203

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
           + I          L + L+ MY++CG L  AR++FDK+ D+D+ +W++++  Y  +    
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRS- 262

Query: 137 AENVTEGFRLFRSLRE-SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
               TE  +LFR +   S    + +T+  ++  C   G +     VH Y  +        
Sbjct: 263 ----TEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG 255
           ++ +L++++SK G I  AK +FD M  +D++ W  M+  +A +G G E    F  +  + 
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD 378

Query: 256 LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
           L PD+ +   VL   S  G   E +   Y I+ L
Sbjct: 379 LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL 412



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 38/308 (12%)

Query: 106 YARRLFDKMPDRDLISWNSILAAYAHSG--EGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           YA  +F    + D+++WNS+L A+ +S       ++ TE     R++ +  TF S     
Sbjct: 30  YAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPS----- 84

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            LLK C         + +HG  +K  L  D ++   L+N+Y+  G ++ A+FLF+ M  R
Sbjct: 85  -LLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHE 278
           + V+W  M+  Y +N    E   L+  +   G  PD+ ++  ++   ++L     G +  
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLH 203

Query: 279 EQVQAYAIKLL------LYN------------------NNSNVVLWNKKLSGYLQVGDNH 314
             ++   +K+       L N                  ++ +V  W+  + GY++   + 
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRST 263

Query: 315 GAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            A++ F  +   SN++ + VT L  ++A A   +L  G+ +H    ++    +V + NSL
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323

Query: 374 INMYSKMG 381
           I+M+SK G
Sbjct: 324 IDMFSKCG 331


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/559 (33%), Positives = 287/559 (51%), Gaps = 81/559 (14%)

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y   G +  +  LF       +  W A+I G+ L     +AL  ++ M T G   +  T 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
           ++ +K C     ++ GK +H+ A+K GF+ DL V +G+LD+Y + G +V AQ +F+ +P 
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 556 P-------------------------------DDVAWTTMISGCVDNGEEDLALSIYHQM 584
                                           D V W  MI G   NG  + AL ++ +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
             +   P+E T   ++ A   L ALE GR +H+ +       +  VG +LVDMY+KCG++
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           EDA ++F ++D ++ V WN+M+VG A  G  +E L+LF+ M   G+ P ++TFIG+LSAC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
            ++G V+E ++ F+ M+++YGIEP++EHY  +V+ LGRAG  ++A EL+ +M  E    +
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
              LLGACR+ G    G+ + E L+     +S  Y+LLSNI+AA   WD V   R  MK 
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434

Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
             VKK+P                          I+  +E +   +K  GY P TD VL D
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPL 900
           + E EKER+L  HSEKLA A+GLI+T P + I                     ++ ++ +
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554

Query: 901 Y--ANRFHHLRDGMCPCAD 917
               NRFHH  +G C C D
Sbjct: 555 VRDRNRFHHFVNGSCSCGD 573



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 195/408 (47%), Gaps = 41/408 (10%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           Y++ L     N +V  W   + G+   G +  A+  +  M+   V+ ++ TF    +++ 
Sbjct: 27  YSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF----SSIL 82

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               +  G+ +H   +K GF S + V   L+++Y++ G V           S  +   ++
Sbjct: 83  KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDV----------VSAQQLFDTM 132

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           PE                    S VS TA++  Y ++G +  A  LF+  +  D   WN 
Sbjct: 133 PE-------------------KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 173

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY  +   ++AL LF  M  +  + +E+T+ + + ACG L  L+ G+ +H+Y   +G
Sbjct: 174 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 233

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            + ++ V + ++DMY KCG++ DA+ +F+ I   D VAW +MI G    G    AL ++ 
Sbjct: 234 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFK 293

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAK 640
            M   G+ P   TF  ++ A      + +G  I  N +K +   +P +     +V++  +
Sbjct: 294 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF-NKMKDEYGIEPKIEHYGCMVNLLGR 352

Query: 641 CGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFED 684
            G++E AY L K M++  + VLW  +L     HG    GE+ ++L  D
Sbjct: 353 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVD 400



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 29/229 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK+ H++ +      D ++   L+ +Y+R G +V A++LFD MP++ L+S  ++L  YA 
Sbjct: 90  GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAK 149

Query: 132 SGEGNAENV--------------------------TEGFRLFRSLRESITFTSRLTLAPL 165
            GE +A  V                           E   LFR + ++    + +T+  +
Sbjct: 150 HGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSV 209

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L  C   G + +   VH Y    G+ ++  V  ALV++YSK G + +A+ +FD + ++DV
Sbjct: 210 LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDV 269

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           V W  M+  YA  GF +E   LF  + R GL P + +    +G++S  G
Sbjct: 270 VAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNIT---FIGILSACG 315



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 38/242 (15%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T   +P+ +L L   + K+   +  +     S+L        L  G+  H+ I N+    
Sbjct: 179 TQNGMPNEALVLFRRMLKA--KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF 236

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           +  +   L+ MYS+CGSL  AR +FDK+ D+D+++WNS++  YA  G        E  +L
Sbjct: 237 NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQ-----EALQL 291

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS--------- 197
           F+S+       + +T   +L  C  SG  W +E            WD F           
Sbjct: 292 FKSMCRMGLHPTNITFIGILSACGHSG--WVTEG-----------WDIFNKMKDEYGIEP 338

Query: 198 -----GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAYAENGFGEEVFHLF 248
                G +VN+  + G + +A  L   M  E D VLW  +L   R + +   GE++  L 
Sbjct: 339 KIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL 398

Query: 249 VD 250
           VD
Sbjct: 399 VD 400


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/536 (35%), Positives = 285/536 (53%), Gaps = 47/536 (8%)

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S  LI+ Y R G +  A  +F+      L TWNAMI G I    + + L LF  MH  G 
Sbjct: 28  SNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGF 87

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             DE T+ +       L  +  G+Q+H YA+K G ELDL V+S +  MY++ G + D + 
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +   +P  + VAW T+I G   NG  +  L +Y  M++SG  P++ TF  ++ + S L  
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
             QG+QIHA  IK+  SS   V  SL+ MY+KCG + DA   F + +  + V+W++M+  
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267

Query: 669 LAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
              HG G+E +KLF  M     +E + V F+ +L ACS++GL  +  E F +M EKYG +
Sbjct: 268 YGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P ++HY+ +VD LGRAG   +A  +I SMP +    + + LL AC +  + E  + V ++
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKE 387

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----------------- 830
           ++ ++P DS+ YVLL+N+ A+A +W DV+  R  M+ KNVKK+                 
Sbjct: 388 ILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447

Query: 831 ------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  +  I++ ++ L   +K  GY PDT  VL D++EEEKE  L  HSEKLA A+ L
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 507

Query: 885 ISTPPS----------------------SVILSNKEPLY-ANRFHHLRDGMCPCAD 917
           +  P                        SVI++ +  L   +RFHH  +G C C D
Sbjct: 508 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGD 563



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 159/345 (46%), Gaps = 37/345 (10%)

Query: 71  LGKSTHARILNSSQIPDRFLTNN-LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           LG    A  L        F+++N L+  Y R G LV AR++FD+MPDR L +WN+++A  
Sbjct: 7   LGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIA-- 64

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G    E   EG  LFR +          TL  +         V   + +HGYA+K G
Sbjct: 65  ---GLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYG 121

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           L  D  V+ +L ++Y + GK+++ + +   M  R++V W  ++   A+NG  E V +L+ 
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYNN-- 293
            +  SG  P+  +   VL   SDL  R + +Q+ A AIK             + +Y+   
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241

Query: 294 -------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVAL 339
                        + + V+W+  +S Y   G    AI+ F +M  ++ ++ + V FL  L
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLL 301

Query: 340 AAVAGTDNLNLGQQIHGTTL-KSGFYSAVIVGNSLINMYSKMGCV 383
            A + +   + G ++    + K GF   +     ++++  + GC+
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 346



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 31/203 (15%)

Query: 534 LDMYVKCG-------------------------------AMVDAQSIFNDIPAPDDVAWT 562
           + MY K G                                +V A+ +F+++P      W 
Sbjct: 1   MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            MI+G +     +  LS++ +M   G  PDE+T   +   S+ L ++  G+QIH   IK 
Sbjct: 61  AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKY 120

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               D  V  SL  MY + G ++D  I+ + M +RN V WN +++G AQ+G  E  L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180

Query: 683 EDMKAHGVEPDSVTFIGVLSACS 705
           + MK  G  P+ +TF+ VLS+CS
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCS 203


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/613 (31%), Positives = 315/613 (51%), Gaps = 68/613 (11%)

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-------------------CVC---- 384
           + LG++ H   +K G  S   V  SLI+MY+K G                   C C    
Sbjct: 129 VELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISA 188

Query: 385 --------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
                               G R + +T +++L    ++   +   KQ+H H +K   ++
Sbjct: 189 YARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI-SAIQEGKQLHAHVVKMQYLS 247

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
           ++ V  AL+ +Y + G M EAE +FE+    ++ +W A I G+    +  KAL+ FS M 
Sbjct: 248 ETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMR 307

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
            SG   +E T +  + +CGC+     G+  H   +K G    + V + I+DMY   G M 
Sbjct: 308 ESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMD 367

Query: 545 DAQSIFNDI-PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
           +A+  F  +  A  +V+W  +I+G V N + + A+  + +M    V  +EFT++ + KA 
Sbjct: 368 EAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKAC 427

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           S   +L    QIH+ LIK +  S+  V  SL++ Y +CG++E+A  +F Q+   + V WN
Sbjct: 428 SSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWN 487

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           +++   +Q+G+  + + L   M   G +P S TF+ VLSACS++GLV E  E F  M + 
Sbjct: 488 SIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQD 547

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           Y I+PE  H S +VD LGRAG+ + A + I  +  + +AS+ R LL ACR   + +  ++
Sbjct: 548 YSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEY 607

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------- 832
           VAEK++ LEP D++ YV LSN++A   +W D  + R  M++K + K+P            
Sbjct: 608 VAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMY 667

Query: 833 ------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
                         ++ K++ L+++I++ GY P T  VL     + KE+ + YHSEKLA 
Sbjct: 668 KFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAV 727

Query: 881 AYGLISTPPSSVI 893
            +GL+S PP   I
Sbjct: 728 CFGLLSLPPGKPI 740



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/477 (32%), Positives = 238/477 (49%), Gaps = 39/477 (8%)

Query: 356  GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
            G   + GFY   +   S +          GLR +QF L S+L+A   L +     + +H 
Sbjct: 877  GACARRGFYEEALSAFSEMQKE-------GLRPNQFVLPSILKACGHLSD-RRTGENMHT 928

Query: 416  HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
              +KN   +D+++ +ALI +Y + G + +A  +F+     DL   NAM+ GY      H+
Sbjct: 929  VILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHE 988

Query: 476  ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
            AL+L   M  +G + + ++  T +                     +GF        G   
Sbjct: 989  ALBLVQKMQQAGVKPNVVSWNTLI---------------------AGFS-----QVGDKS 1022

Query: 536  MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
            M  +   ++ A  +      PD V+WT++ISG V N         + +M   G  P   T
Sbjct: 1023 MVSEVFRLMTANGV-----EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVT 1077

Query: 596  FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
             + L+ A + +  L  G++IH   + +    D +V  +LVDMYAKCG I +A ILF  M 
Sbjct: 1078 ISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMP 1137

Query: 656  MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             RNTV WN+++ G A HG   E ++LF  M+    + D +TF  VL+ACS+ G+V     
Sbjct: 1138 ERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGES 1197

Query: 716  NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
             F  M+EKY IEP +EHY+ +VD LGRAG+  EA +LI +MP E    +  ALLGACR  
Sbjct: 1198 LFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNH 1257

Query: 776  GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
            G+ E  +  AE L  LEP    + +LLSN++A A +W +    +  MK++   K P 
Sbjct: 1258 GNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPG 1314



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 225/540 (41%), Gaps = 78/540 (14%)

Query: 45   SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
            +H +  SSS  +   +        L  G++ HA ++        +    LM+ Y+ CG L
Sbjct: 795  THRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQL 854

Query: 105  VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
              AR+LFDK+P+ ++  W  +  A A  G        E    F  +++     ++  L  
Sbjct: 855  SNARKLFDKIPNTNIRRWIVLTGACARRG-----FYEEALSAFSEMQKEGLRPNQFVLPS 909

Query: 165  LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            +LK C         E +H   LK     D ++  AL+ +YSK G + +A  +FD + ++D
Sbjct: 910  ILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKD 969

Query: 225  VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
            +V+   M+  YA++GF  E   L   + ++G+ P+  S   ++   S +G   ++ + + 
Sbjct: 970  LVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVG---DKSMVSE 1026

Query: 285  AIKLLLYNN-NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
              +L+  N    +VV W   +SG++Q   NH   + F  M+       SVT    L A  
Sbjct: 1027 VFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 1086

Query: 344  GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               NL  G++IHG  +  G    V V ++L++MY+K    CG  ++   L  +      +
Sbjct: 1087 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAK----CGYISEAKILFYM------M 1136

Query: 404  PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
            PE             +N    +S     LI  Y  +G   EA                  
Sbjct: 1137 PE-------------RNTVTWNS-----LIFGYANHGYCNEA------------------ 1160

Query: 464  IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYA 518
                         +ELF+ M  S  +LD +T    + AC    M++ G     K    Y 
Sbjct: 1161 -------------IELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYR 1207

Query: 519  MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
            ++   E   C    ++D+  + G + +A  +   +P  PD   W  ++  C ++G  +LA
Sbjct: 1208 IEPRLEHYAC----MVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 129/570 (22%), Positives = 238/570 (41%), Gaps = 88/570 (15%)

Query: 110 LFDKMPDRDLISWNSILAAYAHSG--EGNAENVTEGFRLFRSLRESITF----TSRLTLA 163
           LF+K P R  +S    +     SG  +   E V E     R+    + F      R  + 
Sbjct: 62  LFEKTPKRIGVS----ITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQYVF 117

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
             L  C   G V      H + +KIGL  DEFV  +L+++Y+K G++  A  ++D M   
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQ 282
           D      ++ AYA NGF  + F +F+ +   G  P+  +   +L V   +    E +Q+ 
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237

Query: 283 AYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNH 314
           A+ +K             L LY+                  N++ W   ++G+ Q GD  
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
            A++ F  M  S ++ +  TF + LA+     +   G+  H   +K G  S V VG ++I
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357

Query: 375 NMYSKMG---------------------------------------CVCGL-----RTDQ 390
           +MYS +G                                         C +       ++
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNE 417

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           FT +++ +A SS P  L  + QIH   IK++  ++  V+++LI+ Y + GS+  A  +F 
Sbjct: 418 FTYSNIFKACSSFP-SLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFT 476

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                D+ +WN++I  Y  + +  KA+ L   M   G +    T  T + AC    ++++
Sbjct: 477 QISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQE 536

Query: 511 GKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           G++     ++    + +    S ++D+  + G + +A      +   P    W  +++ C
Sbjct: 537 GQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAAC 596

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
             N   +L ++ Y   ++  + P++ T  +
Sbjct: 597 RYNS--NLQMAEYVAEKILDLEPNDATVYV 624



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 147/279 (52%), Gaps = 5/279 (1%)

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           + +A+  CG    ++ G++ H + +K G   D  V + ++DMY KCG +  A  +++ + 
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
           + D      +IS    NG    A  ++ Q+   G  P+ +T++ ++     ++A+++G+Q
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQ 235

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +HA+++K+   S+  VG +L+ +Y+KCG +E+A I+F+ +  RN + W A + G  QHG+
Sbjct: 236 LHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGD 295

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN--FHLMREKYGIEPEVEH 732
            ++ LK F  M+  G+EP+  TF  VL++C   G V +  +   FH    K G+   V  
Sbjct: 296 FKKALKQFSMMRESGIEPNEFTFSIVLASC---GCVKDFIDGRMFHTQVIKKGMASGVFV 352

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
            + ++D     G   EA +    M   AS     AL+  
Sbjct: 353 GTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAG 391



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 17/407 (4%)

Query: 285  AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
            A KL     N+N+  W        + G    A+  F  M +  ++ +       L A   
Sbjct: 857  ARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGH 916

Query: 345  TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-CGLRTDQFTLASVLRASSSL 403
              +   G+ +H   LK+ F S   + ++LI MYSK G V    R   + +   L   +++
Sbjct: 917  LSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAM 976

Query: 404  PEGLHLSKQIH-----VHAIKNDTVADSFVS-TALIDVYCRNG--SMAEAEYLFENKDGF 455
              G      +H     V  ++   V  + VS   LI  + + G  SM    +     +G 
Sbjct: 977  VSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV 1036

Query: 456  --DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
              D+ +W ++I G++ + ++H+  + F  M   G     +TI++ + AC  +  L+ GK+
Sbjct: 1037 EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKE 1096

Query: 514  MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
            +H YAM  G E D+ V S ++DMY KCG + +A+ +F  +P  + V W ++I G  ++G 
Sbjct: 1097 IHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGY 1156

Query: 574  EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL---IKLDCSSDPFV 630
             + A+ +++QM  S    D  TF  ++ A S    +E G  +   +    +++   + + 
Sbjct: 1157 CNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYA 1216

Query: 631  GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
               +VD+  + G + +AY L K M +  +  +W A+L     HGN E
Sbjct: 1217 --CMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIE 1261



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 142/278 (51%), Gaps = 4/278 (1%)

Query: 508  LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            L +G+ +HA+ +  G       ++ ++  Y +CG + +A+ +F+ IP  +   W  +   
Sbjct: 819  LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGA 878

Query: 568  CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
            C   G  + ALS + +M+  G+ P++F    ++KA   L+    G  +H  ++K    SD
Sbjct: 879  CARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD 938

Query: 628  PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             ++  +L+ MY+KCG++E A  +F  +  ++ V+ NAM+ G AQHG   E L L + M+ 
Sbjct: 939  AYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQ 998

Query: 688  HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
             GV+P+ V++  +++  S  G  S   E F LM    G+EP+V  ++ ++    +     
Sbjct: 999  AGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSWTSVISGFVQNFHNH 1057

Query: 748  E---AGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            E   A + +L   F  S+    +LL AC    +   GK
Sbjct: 1058 EGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGK 1095



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 149/350 (42%), Gaps = 35/350 (10%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F+Q  +  +  +   + ++L    + S +  GK  HA ++    + +  + N L+T+YS+
Sbjct: 202 FMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSK 261

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           CG +  A  +F+ +  R++ISW + +  +   G+       +  + F  +RES    +  
Sbjct: 262 CGMMEEAEIVFESLRQRNIISWTASINGFYQHGD-----FKKALKQFSMMRESGIEPNEF 316

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T + +L  C            H   +K G+    FV  A++++YS  G++ EA+  F  M
Sbjct: 317 TFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM 376

Query: 221 -QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL-------------CPDDESVQCV 266
            +    V W  ++  Y  N   E+    F  + +  +             C    S+   
Sbjct: 377 GRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATT 436

Query: 267 LGVISDLGKRHEEQ--------VQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQV 310
           + + S L K + E         ++AY        A+++    ++++VV WN  +  Y Q 
Sbjct: 437 VQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQN 496

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           GD   AI     MI    +  S TFL  L+A + +  +  GQ+   + ++
Sbjct: 497 GDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQ 546



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 36/294 (12%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAI------------- 64
           ++F S  +   RN+ S++ S+  F Q   F  +      FS++R +              
Sbjct: 270 IVFESLRQ---RNIISWTASINGFYQHGDFKKALKQ---FSMMRESGIEPNEFTFSIVLA 323

Query: 65  ---STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR-DLI 120
                 D + G+  H +++        F+   ++ MYS  G +  A + F +M      +
Sbjct: 324 SCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNV 383

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           SWN+++A Y  +     E + +    F R ++E +   +  T + + K C S   +  + 
Sbjct: 384 SWNALIAGYVLN-----EKIEKAMEAFCRMVKEDVA-CNEFTYSNIFKACSSFPSLATTV 437

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            +H   +K  +  +  V+ +L+  Y++ G +  A  +F  + + DVV W  +++AY++NG
Sbjct: 438 QIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNG 497

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ------VQAYAIK 287
              +   L   +   G  P   +   VL   S  G   E Q      VQ Y+I+
Sbjct: 498 DPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQ 551



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%)

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           AL +GR +HA+L+ +  +   +    L+  Y +CG + +A  LF ++   N   W  +  
Sbjct: 818 ALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTG 877

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             A+ G  EE L  F +M+  G+ P+      +L AC +        EN H +  K   E
Sbjct: 878 ACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLS-DRRTGENMHTVILKNSFE 936

Query: 728 PEVEHYSFLVDALGRAGRTKEA 749
            +    S L+    + G  ++A
Sbjct: 937 SDAYIISALIYMYSKCGHVEKA 958



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 23/219 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +I +   S   L      H+R++ S+   +  + ++L+  Y++CGSL  A ++F ++ D 
Sbjct: 422 NIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDA 481

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SWNSI+ AY+ +G+       +   L R + E     +  T   +L  C  SG V  
Sbjct: 482 DVVSWNSIIKAYSQNGDP-----WKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQE 536

Query: 178 SE-----TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVM 231
            +      V  Y+++     +E     +V+I  + G++  A  F+     +    +W+ +
Sbjct: 537 GQEFFKSMVQDYSIQP----EETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPL 592

Query: 232 LRAYAENG---FGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           L A   N      E V    +DL      P+D +V   L
Sbjct: 593 LAACRYNSNLQMAEYVAEKILDLE-----PNDATVYVTL 626


>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/544 (33%), Positives = 281/544 (51%), Gaps = 46/544 (8%)

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
           ND     F+   + D   RNG  + A    + +   +    N+MI  Y+  N    +L +
Sbjct: 17  NDVRRGHFLMKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYI 76

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F+ MH      D  T    +KA   L     GK +H   ++ GF  D+  S+ ++ +Y  
Sbjct: 77  FALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCT 136

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           C ++ DA  +F+++P  + V W  +I+G   N +   A+  +  M   G  P E T  ++
Sbjct: 137 CLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVV 196

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A S L A  QG+ IH  +       + FVG +L+DMYAKCG + +   +F+++  +N 
Sbjct: 197 LSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNV 256

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
             WN ++ G A +G G+  L+ F  M     +PD VTF+GVL AC + GLV+E    F  
Sbjct: 257 YTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMS 316

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M++++G++P +EHY  +VD LGRAG  +EA ELI SM  E    + RALL ACRV G+T+
Sbjct: 317 MKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTK 376

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------- 832
            G+++ ++L+ LEP +   YVLLSNI++   +W +V   RG M  + ++K P        
Sbjct: 377 LGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEIN 436

Query: 833 ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                           + I+ +++ LIK++KE GYV  TD  L D+E+EEKE ++ YHSE
Sbjct: 437 NVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSE 496

Query: 877 KLARAYGLISTPPSSV------------------ILSNKEPLYA-----NRFHHLRDGMC 913
           KLA A+GL+++P                      +LS     Y      NRFHH  +G C
Sbjct: 497 KLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFC 556

Query: 914 PCAD 917
            C D
Sbjct: 557 SCRD 560



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 8/309 (2%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D  T  +VL+A++ L +   + K IH   I+   + D + STAL+ +YC   S+++A  L
Sbjct: 88  DSSTFPAVLKATAQLCD-TGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQL 146

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     +  TWNA+I GY  +    KA++ F  M   G +  E T+   + AC  L   
Sbjct: 147 FDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAF 206

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
            QGK +H +   +   L++ V + ++DMY KCGA+ + + +F +I   +   W  +ISG 
Sbjct: 207 NQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGY 266

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             NG+ D AL  + +M +    PDE TF  ++ A      + +GR    ++ K      P
Sbjct: 267 AMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSM-KQQFGLQP 325

Query: 629 FVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLF 682
            +     +VD+  + G +E+A  L + M +  + ++W A+L     HGN   GE  +K  
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385

Query: 683 EDMKAHGVE 691
            +++ +  E
Sbjct: 386 IELEPNNGE 394



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 5/261 (1%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           TY +L     SL  F     FS    SS + ++L+      D  +GK  H  ++    I 
Sbjct: 63  TYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFIC 122

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D + +  L+ +Y  C S+  A +LFD+MP+R+ ++WN+++  Y H+         +    
Sbjct: 123 DVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHN-----RKFVKAIDA 177

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           FR +       S  T+  +L  C   G     + +H +     L  + FV  AL+++Y+K
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + E + +F+ ++E++V  W V++  YA NG G+     F  +      PD+ +   V
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297

Query: 267 LGVISDLGKRHEEQVQAYAIK 287
           L      G   E + Q  ++K
Sbjct: 298 LCACCHQGLVTEGRWQFMSMK 318



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 137/343 (39%), Gaps = 54/343 (15%)

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
           Y  + N    N  +  YL +  +  ++  F  M + ++  DS TF   L A A   +  +
Sbjct: 48  YRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGV 107

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------------- 384
           G+ IHG  ++ GF   V    +L+++Y    C C                          
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLY----CTCLSISDASQLFDEMPERNAVTWNALIT 163

Query: 385 ---------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
                                G +  + T+  VL A S L    +  K IH     N   
Sbjct: 164 GYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLG-AFNQGKWIHEFIYHNRLR 222

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            + FV TALID+Y + G++ E E +FE     ++ TWN +I GY ++     AL+ FS M
Sbjct: 223 LNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRM 282

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGK-QMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
                + DE+T    + AC    ++ +G+ Q  +   + G +  +     ++D+  + G 
Sbjct: 283 LMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGL 342

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           + +A  +   +   PD + W  ++  C  +G   L   I  ++
Sbjct: 343 LEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385


>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/605 (32%), Positives = 311/605 (51%), Gaps = 80/605 (13%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           DQ  + S+L+ S  + + L     IH   I+N    D F+   L+    +  ++  A  +
Sbjct: 48  DQKQIISLLQRSKHINQVL----PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 103

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           F+     ++  + A+I G++ S N   A++L+S M       D   +A+ +KACG  L L
Sbjct: 104 FQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLAL 163

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA------------- 555
           ++G+++H+ A+K G   +  V   I+++Y KCG + DA+ +F ++P              
Sbjct: 164 REGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYS 223

Query: 556 -----------------PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
                             D V WT MI G V N E + AL  +  M+   V P+EFT   
Sbjct: 224 DQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVC 283

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++ A S L ALE GR +H+ + K +   + FVG +L++MY++CG+I++A  +F +M  R+
Sbjct: 284 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRD 343

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            + +N M+ GL+ +G   + ++LF  M    + P +VTF+GVL+ACS+ GLV   ++ FH
Sbjct: 344 VITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFH 403

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            M   YG+EP++EHY  +VD LGR GR +EA +LI +M       M   LL AC++  + 
Sbjct: 404 SMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNL 463

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
           E G+ VA+ L      DS  YVLLS+++A++ +W +    R +MK   ++K+P       
Sbjct: 464 ELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEV 523

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                            + I+ K+E L + ++  GY P+ + VL D+E+ EKE AL  HS
Sbjct: 524 NNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHS 583

Query: 876 EKLARAYGLISTPPSSVI--LSNKEPLY---------------------ANRFHHLRDGM 912
           E+LA  YGLIST P +VI  + N    Y                      NRFH+  +G 
Sbjct: 584 ERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGA 643

Query: 913 CPCAD 917
           C C D
Sbjct: 644 CSCGD 648



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 210/452 (46%), Gaps = 41/452 (9%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA ++  Y +N NV L+   + G++  G+   AI+ +  M+  ++  D+      L A  
Sbjct: 99  YASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACG 158

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
               L  G+++H   LK G  S  +V   ++ +Y K G           L    R    +
Sbjct: 159 SQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG----------ELGDARRVFEEM 208

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           PE               D VA    ST +I  Y   G + EA  +F      D   W AM
Sbjct: 209 PE---------------DVVA----STVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I G++ +   ++ALE F  M     R +E TI   + AC  L  L+ G+ +H+Y  K   
Sbjct: 250 IDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 309

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           EL+L V + +++MY +CG++ +AQ++F+++   D + + TMISG   NG+   A+ ++  
Sbjct: 310 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 369

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKC 641
           M    + P   TF  ++ A S    ++ G +I  ++ + D   +P +     +VD+  + 
Sbjct: 370 MIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTR-DYGVEPQIEHYGCMVDLLGRV 428

Query: 642 GNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEPDSVTF 697
           G +E+AY L + M M  + ++   +L     H N   GE+  K+ ED      + DS T+
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRG----QADSGTY 484

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           + +    + +G   EA +    M+E  G++ E
Sbjct: 485 VLLSHVYASSGKWKEAAQVRAKMKEA-GMQKE 515



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 63/357 (17%)

Query: 39  LPFL---QKSHFSSSSS--------SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           LPF     K H +S+S+          Q  S+L+ +   + +L     HA+++ +    D
Sbjct: 24  LPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVL---PIHAQLIRNGHSQD 80

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F+   L+   S+C ++ YA R+F    + ++  + +++  +  SG     N  +  +L+
Sbjct: 81  PFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG-----NYFDAIQLY 135

Query: 148 -RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
            R L +SI   + L +A +LK C S   +     VH  ALK+GL  +  V   ++ +Y K
Sbjct: 136 SRMLHDSILPDNYL-MASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGK 194

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G++ +A+ +F+ M E DVV   VM+ +Y++ G  EE   +F  + R             
Sbjct: 195 CGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRR------------- 240

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                        + V W   + G+++  + + A+E F  M   
Sbjct: 241 ----------------------------KDTVCWTAMIDGFVRNEEMNRALEAFRGMQGE 272

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           NV+ +  T +  L+A +    L +G+ +H    K      + VGN+LINMYS+ G +
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSI 329



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 45/330 (13%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL+   S   L  G+  H+R L      +R +   +M +Y +CG L  ARR+F++MP+ 
Sbjct: 152 SILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE- 210

Query: 118 DLISWNSILAAYAHSG---EGNA-----------------------ENVTEGFRLFRSLR 151
           D+++   ++++Y+  G   E  A                       E +      FR ++
Sbjct: 211 DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQ 270

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 +  T+  +L  C   G +     VH Y  K  +  + FV  AL+N+YS+ G I 
Sbjct: 271 GENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSID 330

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCV 266
           EA+ +FD M++RDV+ +  M+   + NG   +   LF  +    L P + +       C 
Sbjct: 331 EAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACS 390

Query: 267 LGVISDLG-KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
            G + D G K      + Y ++  + +    V L  +            G +E   ++IR
Sbjct: 391 HGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV-----------GRLEEAYDLIR 439

Query: 326 S-NVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           +  +  D +     L+A     NL LG+Q+
Sbjct: 440 TMKMTPDHIMLGTLLSACKMHKNLELGEQV 469


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 198/601 (32%), Positives = 309/601 (51%), Gaps = 52/601 (8%)

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS--KQIHVHAIKNDTV 423
           A + G+  +  + +M     +R D  TLAS LRA++   E  H++  + +H + +K    
Sbjct: 188 AGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAA---EASHMAMGRCVHGYGVKCGLA 244

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
               V T L+ +Y + G M  A++LF+  D  DL  +NA+I GY ++     ++ELF  +
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKEL 304

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
             SG R +  T+   +            + +HA+ +K+  + D  VS+ +  +Y +   M
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             A+SIF+ +      +W  MISG   NG  ++A++++  M+   V P+  T +  + A 
Sbjct: 365 ESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSAC 424

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           + L AL  G+ +H  + K     + +V  +L+DMYAKCG+I +A  +F +MD +N V WN
Sbjct: 425 AHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWN 484

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           AM+ G   HG G E LKL++DM    + P S TF+ V+ ACS+ GLV E  + F +M  +
Sbjct: 485 AMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNE 544

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA-SASMHRALLGACRVQGDTETGK 782
           Y I P +EH + +VD LGRAG+  EA ELI   P  A    +  ALLGAC V  +++  K
Sbjct: 545 YRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAK 604

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------- 831
             ++KL  L+  ++  YVLLSN++ +   + +    R E K + + K P           
Sbjct: 605 LASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRP 664

Query: 832 ------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
                       ++ I++ +E L  ++ E GY P T+  L DVEEEEKE  +  HSEKLA
Sbjct: 665 HVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLA 724

Query: 880 RAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCA 916
            A+GL+ST P + I   K                           A+RFHH RDG+C C 
Sbjct: 725 IAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCG 784

Query: 917 D 917
           D
Sbjct: 785 D 785



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 170/341 (49%), Gaps = 6/341 (1%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           ++ +H  ++     AD+FV++AL  +Y +     +A  +F+     D   WN ++ G   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 470 SNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           S    +ALE F  M  +G  R D  T+A++++A      +  G+ +H Y +K G      
Sbjct: 193 S----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V +G++ +Y KCG M  AQ +F+ +  PD VA+  +ISG   NG  + ++ ++ ++  SG
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
             P+  T   ++   S        R +HA ++K    +D  V  +L  +Y +  ++E A 
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F  M  +    WNAM+ G AQ+G  E  + LF+ M+   V+P+ +T    LSAC++ G
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            +S   +  H +  K  +E  V   + L+D   + G   EA
Sbjct: 429 ALSLG-KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEA 468



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 53/421 (12%)

Query: 7   ANLKPRHKHTYVIFSSFT-KDTY------RNLPSFSLSLL-PFLQKSHFSSSSSSSQWFS 58
           A+L+    H   +F +F   D +      R+LPS    LL P      F+ +++S     
Sbjct: 64  ASLRAPPSHLLRLFRAFPCPDRFLRNALLRSLPSLRPHLLFPSPDSFSFAFAATSLSSSC 123

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
             R     +D    ++ H   + +    D F+ + L  +Y +      AR++FD +P  D
Sbjct: 124 SSR----GNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPD 179

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            I WN++LA     G   +E +    R+  + R     T   TLA  L+    + ++   
Sbjct: 180 TILWNTLLA-----GLPGSEALEAFVRMVDAGRVRPDST---TLASSLRAAAEASHMAMG 231

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             VHGY +K GL   E V   L+++YSK G +  A+FLFD M   D+V +  ++  Y+ N
Sbjct: 232 RCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVN 291

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---EQVQAYAIKLLLYNN-- 293
           G  E    LF +L  SG  P+  ++  V+ V S  G  HE     + A+ +K  L  +  
Sbjct: 292 GMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFG--HELLARCLHAFVVKARLDADAL 349

Query: 294 --------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                        +  WN  +SGY Q G    A+  F  M   N
Sbjct: 350 VSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELN 409

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           VQ + +T    L+A A    L+LG+ +H    K      V V  +LI+MY+K G +   R
Sbjct: 410 VQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEAR 469

Query: 388 T 388
           +
Sbjct: 470 S 470



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 34/331 (10%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S+   S LR A   S + +G+  H   +         +   LM++YS+CG +  A+ LFD
Sbjct: 212 STTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFD 271

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +M + DL+++N++++ Y+ +G      V     LF+ L  S    +  TL  ++ +    
Sbjct: 272 RMDNPDLVAYNALISGYSVNG-----MVESSVELFKELTASGWRPNSSTLVAVIPVYSPF 326

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G+   +  +H + +K  L  D  VS AL  +Y +   +  A+ +FD M E+ +  W  M+
Sbjct: 327 GHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMI 386

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------------KRHEEQ 280
             YA+NG  E    LF  +    + P+  ++   L   + LG             + + +
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLE 446

Query: 281 VQAYAIKLLL-----------------YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           +  Y +  L+                   +N NVV WN  +SGY   G    A++ + +M
Sbjct: 447 LNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDM 506

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           + + +   S TFL  + A +    ++ GQ++
Sbjct: 507 LDARILPTSSTFLSVIYACSHGGLVDEGQKV 537



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 81/151 (53%), Gaps = 16/151 (10%)

Query: 69  LLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L LGK  H RI++  ++  + ++   L+ MY++CGS+  AR +FD+M +++++SWN++++
Sbjct: 430 LSLGKWVH-RIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMIS 488

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV-----H 182
            Y   G+G      E  +L++ + ++    +  T   ++  C   G V   + V     +
Sbjct: 489 GYGLHGQG-----AEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTN 543

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
            Y +  G+   E  +  +V++  + GK+ EA
Sbjct: 544 EYRITPGI---EHCT-CMVDLLGRAGKLNEA 570


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 187/561 (33%), Positives = 284/561 (50%), Gaps = 46/561 (8%)

Query: 403  LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
            LP  L   +Q+H  A  +  + +  V+  L+  Y    ++ +A  LF+     D  +W+ 
Sbjct: 747  LPTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSV 806

Query: 463  MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
            M+ G+    +       F  +   G R D  T+   ++AC  L  L+ G+ +H    K G
Sbjct: 807  MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866

Query: 523  FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
             +LD  V + ++DMY KC  + DA+ +F+ +   D V WT MI G  + G  + +L ++ 
Sbjct: 867  LDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFD 926

Query: 583  QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
            +MR  GVVPD+     +V A + L A+ + R I   + +     D  +G +++DM+AKCG
Sbjct: 927  KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 986

Query: 643  NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
             +E A  +F +M+ +N + W+AM+     HG G + L LF  M   G+ P+ +T + +L 
Sbjct: 987  CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046

Query: 703  ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
            ACS+ GLV E    F  M E Y +  +V+HY+ +VD LGRAGR  EA +LI SM  E   
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDE 1106

Query: 763  SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
             +  A LGACR   D    +  A  L+ L+P +   Y+LLSNI+A A +W+DV   R  M
Sbjct: 1107 GLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLM 1166

Query: 823  KRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
             ++ +KK P                       +  I+  ++ L  +++  GYVPDT+FVL
Sbjct: 1167 SQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVL 1226

Query: 860  LDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY------------------ 901
             DV+EE K   LY HSEKLA A+GLI+TP  + I   K                      
Sbjct: 1227 HDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRV 1286

Query: 902  -----ANRFHHLRDGMCPCAD 917
                 ANRFHH ++G C C D
Sbjct: 1287 IIVRDANRFHHFKEGACSCGD 1307



 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 177/506 (34%), Positives = 269/506 (53%), Gaps = 23/506 (4%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +Q+H  A  +  + +  V+  LI  Y    ++ +A  LF+     D  +W+ M+ G+   
Sbjct: 79  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +       F  +   G R D  T+   ++AC  L  L+ G+ +H    K G +LD  V 
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 198

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + ++DMYVKC  + DA+ +F+ +   D V WT MI G  + G+ + +L ++ +MR  GVV
Sbjct: 199 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 258

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+     +V A + L A+ + R I   + +     D  +G +++DMYAKCG +E A  +
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M+ +N + W+AM+     HG G + L LF  M + G+ PD +T   +L ACS+ GLV
Sbjct: 319 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLV 378

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E    F  M E Y +  +V+HY+ +VD LGRAGR  EA +LI SM  E    +  A LG
Sbjct: 379 EEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLG 438

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACR   D    +  A  L+ L+  +   YVLLSNI+A A +W+DV   R  M ++ +KK 
Sbjct: 439 ACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKT 498

Query: 831 P-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P                       +  I+  ++ L  +++  GYVPDT+FVL DV+EE K
Sbjct: 499 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELK 558

Query: 868 ERALYYHSEKLARAYGLISTPPSSVI 893
              LY HSEKLA A+GLI+TP  + I
Sbjct: 559 IGILYTHSEKLAIAFGLIATPEHTPI 584



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 175/381 (45%), Gaps = 46/381 (12%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS-------------------- 378
           ++A+    NL   +Q+H      G    ++V N LI  YS                    
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 379 -----------KMG----CV--------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                      K+G    C         CG R D +TL  V+RA   L + L + + IH 
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL-KNLQMGRLIHH 184

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
              K     D FV  AL+D+Y +   + +A +LF+     DL TW  MI GY     +++
Sbjct: 185 IVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANE 244

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
           +L LF  M   G   D++ + T V AC  L  + + + +  Y  +  F+LD+ + + ++D
Sbjct: 245 SLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMID 304

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KCG +  A+ IF+ +   + ++W+ MI+    +G+   AL ++  M  SG++PD+ T
Sbjct: 305 MYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKIT 364

Query: 596 FAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            A L+ A S    +E+G +  +++ +     +D      +VD+  + G +++A  L K M
Sbjct: 365 LASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSM 424

Query: 655 DM-RNTVLWNAMLVGLAQHGN 674
            + ++  LW A L     H +
Sbjct: 425 TIEKDEGLWGAFLGACRTHKD 445



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 148/293 (50%), Gaps = 3/293 (1%)

Query: 384  CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
            CG R D +TL  V+RA   L + L + + IH    K     D FV  AL+D+Y +   + 
Sbjct: 830  CGARPDNYTLPFVIRACRDL-KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 888

Query: 444  EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
            +A +LF+     DL TW  MI GY    N++++L LF  M   G   D++ + T V AC 
Sbjct: 889  DARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 948

Query: 504  CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
             L  + + + +  Y  +  F+LD+ + + ++DM+ KCG +  A+ IF+ +   + ++W+ 
Sbjct: 949  KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 1008

Query: 564  MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-L 622
            MI+    +G+   AL ++  M  SG++P++ T   L+ A S    +E+G +  + + +  
Sbjct: 1009 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDY 1068

Query: 623  DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGN 674
                D      +VD+  + G +++A  L   M   ++  LW A L     H +
Sbjct: 1069 SVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKD 1121



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 3/250 (1%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L Q +Q+HA A   G   ++ V++ ++  Y    A+ DA  +F+ +   D V+W+ M+ G
Sbjct: 75  LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 134

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G+       + ++   G  PD +T   +++A   L  L+ GR IH  + K     D
Sbjct: 135 FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 194

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
            FV  +LVDMY KC  IEDA  LF +M  R+ V W  M+ G A+ G   E+L LFE M+ 
Sbjct: 195 HFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 254

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            GV PD V  + V+ AC+  G + +A   + ++ R+K+ +  +V   + ++D   + G  
Sbjct: 255 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCV 312

Query: 747 KEAGELILSM 756
           + A E+   M
Sbjct: 313 ESAREIFDRM 322



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 177/412 (42%), Gaps = 45/412 (10%)

Query: 44  KSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS 103
           K HF    +   + S L   ++  +L   +  HA+      + +  + N L+  YS   +
Sbjct: 53  KFHFLQRLNPKFYISAL---VNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRA 109

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L  A  LFD M  RD +SW+ ++  +A  G+         F  FR L          TL 
Sbjct: 110 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD-----YINCFGTFRELIRCGARPDNYTLP 164

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            +++ C     +     +H    K GL  D FV  ALV++Y K  +I +A+FLFD MQER
Sbjct: 165 FVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER 224

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
           D+V W VM+  YAE G   E   LF  +   G+ PD  ++  V+   + LG  H+ ++  
Sbjct: 225 DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIID 284

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             I+   +    +V+L    +  Y + G    A E F  M   NV    +++   +AA  
Sbjct: 285 DYIQRKKF--QLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV----ISWSAMIAAYG 338

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS- 402
                      HG             G   ++++  M    G+  D+ TLAS+L A S  
Sbjct: 339 ----------YHGQ------------GRKALDLFPMM-LSSGMLPDKITLASLLYACSHA 375

Query: 403 --LPEGLH-LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
             + EGL   S     ++++ D        T ++D+  R G + EA  L ++
Sbjct: 376 GLVEEGLRFFSSMWEDYSVRTDVKH----YTCVVDLLGRAGRLDEALKLIKS 423



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 131/306 (42%), Gaps = 34/306 (11%)

Query: 67   SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
            ++L   +  H +      + +  + N L+  YS   +L  A  LFD M  RD +SW+ ++
Sbjct: 749  TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808

Query: 127  AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
              +A  G     +    F  FR L          TL  +++ C     +     +H    
Sbjct: 809  GGFAKVG-----DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY 863

Query: 187  KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
            K GL  D FV  ALV++Y K  +I +A+FLFD M ERD+V W VM+  YAE G   E   
Sbjct: 864  KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLV 923

Query: 247  LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-------QVQAYAIKLLLYN------- 292
            LF  +   G+ PD  ++  V+   + LG  H+        Q + + + ++L         
Sbjct: 924  LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 983

Query: 293  ---------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                              NV+ W+  ++ Y   G    A++ F  M+RS +  + +T + 
Sbjct: 984  KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 1043

Query: 338  ALAAVA 343
             L A +
Sbjct: 1044 LLYACS 1049


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/556 (33%), Positives = 295/556 (53%), Gaps = 49/556 (8%)

Query: 411 KQIHVHAIKNDTVADS--FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           KQIH  +I++     +  F    +  +   +  M+ A  +F      ++ TWN MI G+ 
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 469 LSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            S N   A+ELFS MH +   L D  T     KA   L+ +  G+ +H+  +++GF+   
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            V + ++ MY   G    A  +F  +   D VAW ++I+G   NG  + AL++Y +M   
Sbjct: 172 FVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           GV PD FT   L+ A   L AL  G ++H  ++K+    +     +L+D+Y+KCGN  DA
Sbjct: 232 GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDA 291

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F +M+ R+ V W +++VGLA +G G E LKLF +++  G++P  +TF+GVL ACS+ 
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           G++ E +  F  M+E+YGI P +EH+  +VD L RAG+  +A + I +MP   +A + R 
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LLGAC + G  E G+    ++  LE   S  +VLLSN++A+  +W DV + R  M  K V
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK P                       ++  +A +  + + +K  GYVP T  VL D+EE
Sbjct: 472 KKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEE 531

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN 903
           EEKE AL +H+EK+A A+ L++TPP + I                     +  +E +  +
Sbjct: 532 EEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRD 591

Query: 904 --RFHHLRDGMCPCAD 917
             RFHH +DG C C D
Sbjct: 592 RSRFHHFKDGSCSCKD 607



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 152/306 (49%), Gaps = 5/306 (1%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           + ++S+M     +  D  T   + +A + L + + L + IH   ++N   +  FV  +L+
Sbjct: 120 VELFSQMHAASSILPDTHTFPFLFKAVAKLMD-VSLGEGIHSVVVRNGFDSLRFVQNSLV 178

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y   G    A  +FE     D   WN++I G+ L+   ++AL L+  M + G   D  
Sbjct: 179 HMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGF 238

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T+ + + AC  L  L  G+++H Y +K G   +   S+ +LD+Y KCG   DAQ +F+++
Sbjct: 239 TMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
                V+WT++I G   NG  + AL ++ ++   G+ P E TF  ++ A S    L++G 
Sbjct: 299 EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGF 358

Query: 614 QIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLA 670
             +   +K +    P +     +VD+  + G + DAY   + M +  N V+W  +L    
Sbjct: 359 N-YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417

Query: 671 QHGNGE 676
            HG+ E
Sbjct: 418 IHGHLE 423



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 8/244 (3%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFL 90
           PS ++ L  F Q    SS    +  F  L  A++   D+ LG+  H+ ++ +     RF+
Sbjct: 116 PSPAVEL--FSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFV 173

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
            N+L+ MYS  G    A ++F+ M  RD ++WNS++  +A +G  N     E   L+R +
Sbjct: 174 QNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPN-----EALTLYREM 228

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                     T+  LL  C+  G +   E VH Y +K+GLV ++  S AL+++YSK G  
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           R+A+ +FD M+ER VV W  ++   A NG G E   LF +L R GL P + +   VL   
Sbjct: 289 RDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348

Query: 271 SDLG 274
           S  G
Sbjct: 349 SHCG 352



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 55/345 (15%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAA 341
           ++A ++       N+  WN  + G+ +  +   A+E F  M   S++  D+ TF     A
Sbjct: 86  SFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------ 383
           VA   +++LG+ IH   +++GF S   V NSL++MYS  G                    
Sbjct: 146 VAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAW 205

Query: 384 -------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
                                     G+  D FT+ S+L A   L   L L +++H++ +
Sbjct: 206 NSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL-GALALGERVHMYMV 264

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           K   V +   S AL+D+Y + G+  +A+ +F+  +   + +W ++I G  ++   ++AL+
Sbjct: 265 KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALK 324

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGI 533
           LF  +   G +  EIT    + AC    ML +G     +    Y +    E   C    +
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGC----M 380

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLA 577
           +D+  + G + DA     ++P P + V W T++  C  +G  +L 
Sbjct: 381 VDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELG 425


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 54/579 (9%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS---MAEA 445
           +Q    S+L   +SL E     KQI  + IK +  +D  V T LI+    N +   M  A
Sbjct: 28  NQLHPLSLLSKCTSLNE----LKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHA 83

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
            +LF+     D+  +N M  GY  SN+ + A  LF  +  SG   D+ T ++ +KAC   
Sbjct: 84  HHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASS 143

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             L++G  +H +A+K G   ++ +   +++MY +C  M  A+ +F+++  P  V++  +I
Sbjct: 144 KALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAII 203

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           +G   + + + ALS++ +++ S + P + T   ++ + + L AL+ G+ IH  + K    
Sbjct: 204 TGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFD 263

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
               V  +L+DM+AKCG++ DA  +F+ M +R+T  W+AM+V  A HG+G + + +FE+M
Sbjct: 264 KYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEM 323

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           K  GV PD +TF+G+L ACS+ GLV +    F+ M + YGI P ++HY  +VD LGRAG 
Sbjct: 324 KREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGH 383

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA   +  +  +A+  + R LL AC   G+ E  K V E++  L+      YV+LSN+
Sbjct: 384 LDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNL 443

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFAKVEG----------------L 842
           +A   +W+DV   R  MK + V K P        +++     G                L
Sbjct: 444 YARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDEL 503

Query: 843 IKRIKEGGYVPDTDFVL-LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------- 893
           +K IK  GYVPDT  V   D+EEE KE  L YHSEKLA A+GL++TPP + I        
Sbjct: 504 MKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRI 563

Query: 894 ---LSNKEPLYA------------NRFHHLRDGMCPCAD 917
                N   L +             RFH   DG C C D
Sbjct: 564 CGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGD 602



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 108/205 (52%), Gaps = 9/205 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   S+  L  G   H   +      + ++   L+ MY+ C  +  AR +FD+M   
Sbjct: 135 SLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQP 194

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
            ++S+N+I+  YA S + N     E   LFR L+ S    + +T+  ++  C   G +  
Sbjct: 195 CIVSYNAIITGYARSSQPN-----EALSLFRELQASNIEPTDVTMLSVIMSCALLGALDL 249

Query: 178 SETVHGYALKIGLVWDEFV--SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
            + +H Y  K G  +D++V  + AL+++++K G + +A  +F+GM+ RD   W  M+ A+
Sbjct: 250 GKWIHEYVKKKG--FDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAF 307

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDD 260
           A +G G +   +F ++ R G+ PD+
Sbjct: 308 ATHGDGLKAISMFEEMKREGVRPDE 332



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 173/441 (39%), Gaps = 95/441 (21%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYS---KFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
           + +  Y +K  L  D  V   L+N  +       +  A  LFD + ++D++L+ +M R Y
Sbjct: 46  KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGY 105

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNN- 293
           A +      F LF +L  SGL PDD +   +L    S    R    +  +A+KL L +N 
Sbjct: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165

Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
                                         +V +N  ++GY +    + A+  F  +  S
Sbjct: 166 YICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           N++   VT L  + + A    L+LG+ IH    K GF   V V  +LI+M++K    CG 
Sbjct: 226 NIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAK----CGS 281

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
            TD  ++   +R                      DT A                      
Sbjct: 282 LTDAISIFEGMRV--------------------RDTQA---------------------- 299

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
                        W+AMI  +    +  KA+ +F  M   G R DEIT    + AC    
Sbjct: 300 -------------WSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAG 346

Query: 507 MLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
           +++QG+  + Y+M   + +   +     ++D+  + G + +A +  + +      + W T
Sbjct: 347 LVEQGRG-YFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRT 405

Query: 564 MISGCVDNGEEDLALSIYHQM 584
           ++S C  +G  ++A  +  ++
Sbjct: 406 LLSACSTHGNVEMAKRVIERI 426



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
           N  T+      + +A  LFD++ D+D+I +N +   YA S   N+  +   F LF  L  
Sbjct: 69  NFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARS---NSPYL--AFSLFGELLC 123

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
           S       T + LLK C SS  +     +H +A+K+GL  + ++   L+N+Y++   +  
Sbjct: 124 SGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNA 183

Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES-----VQCVL 267
           A+ +FD M++  +V +  ++  YA +    E   LF +L  S + P D +     + C L
Sbjct: 184 ARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCAL 243

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVL------------------------WNKK 303
               DLGK   E V+       +  N + + +                        W+  
Sbjct: 244 LGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAM 303

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +  +   GD   AI  F  M R  V+ D +TFL  L A +
Sbjct: 304 IVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACS 343


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/570 (33%), Positives = 297/570 (52%), Gaps = 59/570 (10%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S  + EG    KQ H + +K+  +   +V  ALI +Y R   +  A  + +   G D+ +
Sbjct: 141 SGRVKEG----KQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFS 196

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           +N+++   + S    +A ++   M       D +T  + +  C  +  L+ G Q+HA  +
Sbjct: 197 YNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLL 256

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           K+G   D+ VSS ++D Y KCG +++A+  F+ +   + VAWT +++  + NG  +  L+
Sbjct: 257 KTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLN 316

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           ++ +M L    P+EFTFA+L+ A + L AL  G  +H  ++     +   VG +L++MY+
Sbjct: 317 LFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYS 376

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           K GNI+ +Y +F  M  R+ + WNAM+ G + HG G++ L +F+DM + G  P+ VTFIG
Sbjct: 377 KSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIG 436

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI-LSMPF 758
           VLSAC +  LV E +  F  + +K+ +EP +EHY+ +V  LGRAG   EA   +  +   
Sbjct: 437 VLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQV 496

Query: 759 EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSA 818
           +      R LL AC +  +   GK + E ++ ++P D   Y LLSN+ A A +WD V   
Sbjct: 497 KWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKI 556

Query: 819 RGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDT 855
           R  MK +N+KK+P                       +  IF KV+ L+  IK  GY PD 
Sbjct: 557 RKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDV 616

Query: 856 DFVLLDVEEEEKERALYYHSEKLARAYG---------------------------LISTP 888
             VL DVE+E+KE  L +HSEKLA AYG                           LIS  
Sbjct: 617 GVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKA 676

Query: 889 PSSVILSNKEPLYANRFHHLRDGMCPCADN 918
            + +I+       ANRFHH R+G+C C D+
Sbjct: 677 TNRLIIVRD----ANRFHHFREGLCTCNDH 702



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 6/318 (1%)

Query: 401 SSLPEGLHLSKQIHVH-AIKNDTVADSFVS--TALIDVYCRNGSMAEAEYLFENKDGFDL 457
           S+  + L   K IH    ++N T  DS ++   +LI++Y + G    A  LF+     ++
Sbjct: 33  SATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNV 92

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHA 516
            +W+A++ GY+      + L LF ++ +      +E      +  C     +K+GKQ H 
Sbjct: 93  VSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHG 152

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
           Y +KSG  L   V + ++ MY +C  +  A  I + +P  D  ++ +++S  V++G    
Sbjct: 153 YLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGE 212

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           A  +  +M    V+ D  T+  ++   + +  L+ G QIHA L+K     D FV  +L+D
Sbjct: 213 AAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLID 272

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
            Y KCG + +A   F  +  RN V W A+L    Q+G+ EETL LF  M+     P+  T
Sbjct: 273 TYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFT 332

Query: 697 FIGVLSACSYTGLVSEAY 714
           F  +L+AC+   LV+ AY
Sbjct: 333 FAVLLNACA--SLVALAY 348



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 177/386 (45%), Gaps = 47/386 (12%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARIL---NSSQI 85
           R  P+FS+ L             S  +  ++L+ + +   L  GK+ HA+++    +S+ 
Sbjct: 8   RVTPAFSMYL---------PHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKD 58

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
            D    N+L+ +YS+CG    AR+LFD+M  R+++SW++++  Y H GE     V E   
Sbjct: 59  SDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGE-----VLEVLG 113

Query: 146 LFRSLRE-SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           LFR+L      + +      +L  C  SG V   +  HGY LK GL+  ++V  AL+++Y
Sbjct: 114 LFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMY 173

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF-GE--EVFHLFVD----------L 251
           S+   +  A  + D +   DV  +  +L A  E+G  GE  +V    VD          +
Sbjct: 174 SRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYV 233

Query: 252 HRSGLCPDDESVQCVLGVISDLGKR--------HEEQVQAY--------AIKLLLYNNNS 295
              GLC     +Q  L + + L K             +  Y        A K      + 
Sbjct: 234 SVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDR 293

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV W   L+ YLQ G     +  F  M   + + +  TF V L A A    L  G  +H
Sbjct: 294 NVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLH 353

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG 381
           G  + SGF + +IVGN+LINMYSK G
Sbjct: 354 GRIVMSGFKNHLIVGNALINMYSKSG 379



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 187/445 (42%), Gaps = 51/445 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY-DSVTFLVALAAVAGTDNLNLGQQI 354
           NVV W+  + GYL  G+    +  F N++  +  Y +   F + L+  A +  +  G+Q 
Sbjct: 91  NVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQC 150

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------CGLR 387
           HG  LKSG      V N+LI+MYS+   V                            G R
Sbjct: 151 HGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCR 210

Query: 388 T----------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                            D  T  SVL   + + + L L  QIH   +K   V D FVS+ 
Sbjct: 211 GEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRD-LQLGLQIHAQLLKTGLVFDVFVSST 269

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           LID Y + G +  A   F+     ++  W A++  Y+ + +  + L LF+ M     R +
Sbjct: 270 LIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPN 329

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E T A  + AC  L+ L  G  +H   + SGF+  L V + +++MY K G +  + ++F+
Sbjct: 330 EFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFS 389

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
           ++   D + W  MI G   +G    AL ++  M  +G  P+  TF  ++ A   L  +++
Sbjct: 390 NMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQE 449

Query: 612 GRQIHANLI-KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR--NTVLWNAMLVG 668
           G      ++ K D          +V +  + G +++A    K       + V W  +L  
Sbjct: 450 GFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNA 509

Query: 669 LAQHGN---GEETLKLFEDMKAHGV 690
              H N   G++  +    M  H V
Sbjct: 510 CHIHRNYNLGKQITETVIQMDPHDV 534



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 20/314 (6%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  + S+L       DL LG   HA++L +  + D F+++ L+  Y +CG ++ AR+ FD
Sbjct: 229 SVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFD 288

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            + DR++++W ++L AY  +G     +  E   LF  +    T  +  T A LL  C S 
Sbjct: 289 GLRDRNVVAWTAVLTAYLQNG-----HFEETLNLFTKMELEDTRPNEFTFAVLLNACASL 343

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   + +HG  +  G      V  AL+N+YSK G I  +  +F  M  RDV+ W  M+
Sbjct: 344 VALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMI 403

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------EQVQAYAI 286
             Y+ +G G++   +F D+  +G CP+  +   VL     L    E      + ++ + +
Sbjct: 404 CGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDV 463

Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
           +  L +    V L  +  +G L   +N      F+    + V++D V +   L A     
Sbjct: 464 EPGLEHYTCMVALLGR--AGLLDEAEN------FMKTT-TQVKWDVVAWRTLLNACHIHR 514

Query: 347 NLNLGQQIHGTTLK 360
           N NLG+QI  T ++
Sbjct: 515 NYNLGKQITETVIQ 528



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 195/453 (43%), Gaps = 91/453 (20%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL-HRSGLC 257
           +L+N+YSK G+ + A+ LFD M +R+VV W  ++  Y   G   EV  LF +L       
Sbjct: 66  SLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAY 125

Query: 258 PDDESVQCVLGVISDLGKRHE-EQVQAYAIK--LLLYNNNSNVVL--------------- 299
           P++     VL   +D G+  E +Q   Y +K  LLL+    N ++               
Sbjct: 126 PNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQI 185

Query: 300 -----------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                      +N  LS  ++ G    A +    M+   V +DSVT++  L   A   +L
Sbjct: 186 LDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDL 245

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------GL--------------- 386
            LG QIH   LK+G    V V ++LI+ Y K G V        GL               
Sbjct: 246 QLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAY 305

Query: 387 ---------------------RTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDT 422
                                R ++FT A +L A +S   L  G  L  +I +   KN  
Sbjct: 306 LQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHL 365

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           +    V  ALI++Y ++G++  +  +F N    D+ TWNAMI GY       +AL +F  
Sbjct: 366 I----VGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQD 421

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMY 537
           M ++GE  + +T    + AC  L ++++G     + M  + ++ G E   C+ +    + 
Sbjct: 422 MMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVA----LL 477

Query: 538 VKCGAMVDAQSIFNDIPAP--DDVAWTTMISGC 568
            + G + +A++          D VAW T+++ C
Sbjct: 478 GRAGLLDEAENFMKTTTQVKWDVVAWRTLLNAC 510



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSH-------------FSSSSSSSQWFSILRHAISTSDL 69
           F +   RN+ S+S  ++ +L K                 S+  +   F+I+    + S  
Sbjct: 84  FDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGR 143

Query: 70  LL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           +  GK  H  +L S  +  +++ N L+ MYSRC  +  A ++ D +P  D+ S+NSIL+A
Sbjct: 144 VKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSA 203

Query: 129 YAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
              SG  G A  V     L R + E + + S +T   +L LC     +     +H   LK
Sbjct: 204 LVESGCRGEAAQV-----LKRMVDECVIWDS-VTYVSVLGLCAQIRDLQLGLQIHAQLLK 257

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            GLV+D FVS  L++ Y K G++  A+  FDG+++R+VV W  +L AY +NG  EE  +L
Sbjct: 258 TGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNL 317

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDL----------------GKRHEEQVQAYAIKLL-- 289
           F  +      P++ +   +L   + L                G ++   V    I +   
Sbjct: 318 FTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSK 377

Query: 290 ---------LYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                    +++N  N +V+ WN  + GY   G    A+  F +M+ +    + VTF+  
Sbjct: 378 SGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGV 437

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFY 364
           L+A            +H   ++ GFY
Sbjct: 438 LSAC-----------VHLALVQEGFY 452


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 200/588 (34%), Positives = 307/588 (52%), Gaps = 66/588 (11%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK-----NDTVADSFVS-TALIDVYCRNG 440
           R  +    ++L+A ++LP+      QIH H +K     N  V   F S ++LI     + 
Sbjct: 26  RAPEQNCLALLQACNALPK----LTQIHTHILKLGLHNNPLVLTKFASISSLI-----HA 76

Query: 441 SMAEAEYLFENKDG---FDLATWNAMIFGYILSNNSH-KALELFSHMHTSGERLDEITIA 496
           +   A +LF  +     +D   +N +I  Y  + +S  KAL L+  M       ++ T  
Sbjct: 77  TDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYP 136

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC-GAMVDAQSIFNDIPA 555
             +KAC  L +L  G+ +H   +K GF+ D+ V + ++ MY  C G +  A+ +F+++P 
Sbjct: 137 FVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPK 196

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
            D V W+ MI G    G    A++++ +M+++ V PDE T   ++ A + L ALE G+ I
Sbjct: 197 SDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWI 256

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
            A + + +      V  +L+DM+AKCG+I  A  LF+ M+ +  V W +++VG+A HG G
Sbjct: 257 EAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRG 316

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           +E   LFE+M + GV PD V FIG+LSACS++GLV    E F  M +KY + P++EHY  
Sbjct: 317 QEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGC 376

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           +VD   R G  KEA E + +MP E +  + R L+ ACR  G+ + G+ + + LM  EP  
Sbjct: 377 MVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLH 436

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADL--------------------- 834
            S YVLLSNI+A    W+  T  R  M+ K +KK P                        
Sbjct: 437 ESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQH 496

Query: 835 --IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
             I+  V+ + + +K+ GY P T  VLLD+ EE+KE +L  HSEKLA A+GL+ TPP + 
Sbjct: 497 KEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTP 556

Query: 893 I---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           I                     + ++E +    NRFHH + G C C D
Sbjct: 557 IRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGD 604



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 10/303 (3%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARRLFDKMPDR 117
           +L+       L LG++ H  ++      D  + N ++ MYS C G +  AR++FD+MP  
Sbjct: 138 VLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKS 197

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ++W++++  YA  G       TE   LFR ++ +      +T+  +L  C   G +  
Sbjct: 198 DSVTWSAMIGGYARVGRS-----TEAVALFREMQMAEVCPDEITMVSMLSACTDLGALEL 252

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +  Y  +  +     VS AL+++++K G I +A  LF  M E+ +V W  ++   A 
Sbjct: 253 GKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAM 312

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +G G+E   LF ++  SG+ PDD +   +L   S  G   E   + +   +  Y     +
Sbjct: 313 HGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLV-ERGREYFGSMMKKYKLVPKI 371

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
             +   +  Y + G    A+E   NM    ++ + V     ++A  G     LG++I   
Sbjct: 372 EHYGCMVDMYCRTGLVKEALEFVRNM---PIEPNPVILRTLVSACRGHGEFKLGEKITKL 428

Query: 358 TLK 360
            +K
Sbjct: 429 LMK 431



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 141/335 (42%), Gaps = 45/335 (13%)

Query: 90  LTNN--LMTMYSRCGSLVYARR-----LFDKMPDR---DLISWNSILAAYAHSGEGNAEN 139
           L NN  ++T ++   SL++A       LF    D    D   +N+++ AYA +G      
Sbjct: 57  LHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSK--- 113

Query: 140 VTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
             +   L+  +       ++ T   +LK C     +   +TVHG  +K G   D  V   
Sbjct: 114 -DKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNT 172

Query: 200 LVNIYSKF-GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           +V++YS   G I  A+ +FD M + D V W  M+  YA  G   E   LF ++  + +CP
Sbjct: 173 MVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCP 232

Query: 259 DDESVQCVLGVISDLG------------KRHE--EQVQ---------------AYAIKLL 289
           D+ ++  +L   +DLG            +RHE  + V+               + A+KL 
Sbjct: 233 DEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLF 292

Query: 290 LYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
              N   +V W   + G    G    A   F  M  S V  D V F+  L+A + +  + 
Sbjct: 293 RAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVE 352

Query: 350 LGQQIHGTTLKS-GFYSAVIVGNSLINMYSKMGCV 383
            G++  G+ +K       +     +++MY + G V
Sbjct: 353 RGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLV 387



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/414 (21%), Positives = 157/414 (37%), Gaps = 105/414 (25%)

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL-----WKVMLRAYAENGFGEEVF 245
           ++D F+   L+  Y++ G  ++      G+   D +L     +  +L+A A    G EV 
Sbjct: 93  LYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACA----GLEVL 148

Query: 246 HLFVDLHRSGL-----CPDDESVQ--------CVLGVISDLGKRHEEQVQAYAIKLLLYN 292
           +L   +H S +     C  D  VQ        C  G I+   K  +E  +          
Sbjct: 149 NLGQTVHGSVVKFGFDC--DIHVQNTMVHMYSCCAGGINSARKVFDEMPK---------- 196

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
             S+ V W+  + GY +VG +  A+  F  M  + V  D +T +  L+A      L LG+
Sbjct: 197 --SDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGK 254

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
            I     +   +  V V N+LI+M++K G                           +SK 
Sbjct: 255 WIEAYIERHEIHKPVEVSNALIDMFAKCG--------------------------DISKA 288

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           + +    N+    S+  T++I     +G   EA  LFE                      
Sbjct: 289 LKLFRAMNEKTIVSW--TSVIVGMAMHGRGQEATCLFEE--------------------- 325

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDL 527
                     M +SG   D++     + AC    ++++G++     M  Y +    E   
Sbjct: 326 ----------MTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYG 375

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
           C    ++DMY + G + +A     ++P  P+ V   T++S C  +GE  L   I
Sbjct: 376 C----MVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKI 425


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 183/554 (33%), Positives = 294/554 (53%), Gaps = 47/554 (8%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +  H   I+     D   S  LI++Y +   +  A   F       L +WN +I     +
Sbjct: 63  RACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQN 122

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
               +AL+L   M   G   +E TI++ +  C     + +  Q+HA+++K+  + +  V 
Sbjct: 123 AEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVG 182

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
           + +L +Y KC ++ DA  +F  +P  + V W++M++G V NG  + AL I+   +L G  
Sbjct: 183 TALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFD 242

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D F  +  V A + L  L +G+Q+HA   K    S+ +V  SL+DMYAKCG I +AY++
Sbjct: 243 QDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLV 302

Query: 651 FKQ-MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
           F+  +++R+ VLWNAM+ G A+H    E + LFE M+  G  PD VT++ VL+ACS+ GL
Sbjct: 303 FQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGL 362

Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
             E  + F LM  ++ + P V HYS ++D LGRAG   +A +LI  MPF A++SM  +LL
Sbjct: 363 HEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLL 422

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            +C++ G+ E  +  A+ L  +EP ++  ++LL+NI+AA  +WD+V  AR  ++  +V+K
Sbjct: 423 ASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRK 482

Query: 830 DPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
           +                         D I+AK++ L+  +K+  Y  DT   L DVEE  
Sbjct: 483 ERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENR 542

Query: 867 KERALYYHSEKLARAYGLISTP---PSSVIL------------------SNKEPLY--AN 903
           K+  L +HSEKLA  +GL+  P   P  +I                   +++E +    N
Sbjct: 543 KQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTN 602

Query: 904 RFHHLRDGMCPCAD 917
           RFHH +DG C C +
Sbjct: 603 RFHHFKDGFCSCGE 616



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 192/422 (45%), Gaps = 55/422 (13%)

Query: 302 KKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           +KL+   +       +E  V++ R SN+ Y        L   A T +   G+  H   ++
Sbjct: 19  RKLTVISEAKPESSKVENVVHIDRVSNLHY-------LLQLCAKTRSSMGGRACHAQIIR 71

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRT-------------------------------- 388
            G    ++  N LINMYSK   V   R                                 
Sbjct: 72  IGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKL 131

Query: 389 -----------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                      ++FT++SVL  + +    +    Q+H  +IK    ++ FV TAL+ VY 
Sbjct: 132 LIQMQREGTPFNEFTISSVL-CNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYA 190

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           +  S+ +A  +FE+    +  TW++M+ GY+ +    +AL +F +    G   D   I++
Sbjct: 191 KCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISS 250

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI-PAP 556
           AV AC  L  L +GKQ+HA + KSGF  ++ VSS ++DMY KCG + +A  +F  +    
Sbjct: 251 AVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVR 310

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
             V W  MISG   +     A+ ++ +M+  G  PD+ T+  ++ A S +   E+G++  
Sbjct: 311 SIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYF 370

Query: 617 ANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGN 674
             +++    S   +  S ++D+  + G +  AY L ++M    T  +W ++L     +GN
Sbjct: 371 DLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGN 430

Query: 675 GE 676
            E
Sbjct: 431 IE 432



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 1/239 (0%)

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+  HA  ++ G E+D+  S+ +++MY KC  +  A+  FN++P    V+W T+I     
Sbjct: 62  GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ 121

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           N E+  AL +  QM+  G   +EFT + ++   +   A+ +  Q+HA  IK    S+ FV
Sbjct: 122 NAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFV 181

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +L+ +YAKC +I+DA  +F+ M  +N V W++M+ G  Q+G  EE L +F + +  G 
Sbjct: 182 GTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGF 241

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           + D       +SAC+    + E  +  H +  K G    +   S L+D   + G  +EA
Sbjct: 242 DQDPFMISSAVSACAGLATLIEG-KQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREA 299



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 35/315 (11%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+    T   + G++ HA+I+      D   +N L+ MYS+C  +  AR+ F++MP + 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SWN+++ A   + E       E  +L   ++   T  +  T++ +L  C     +   
Sbjct: 109 LVSWNTVIGALTQNAEDR-----EALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC 163

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H +++K  +  + FV  AL+++Y+K   I++A  +F+ M E++ V W  M+  Y +N
Sbjct: 164 MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 223

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN---- 293
           GF EE   +F +    G   D   +   +   + L    E +QV A + K    +N    
Sbjct: 224 GFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVS 283

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      ++VLWN  +SG+ +      A+  F  M +   
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343

Query: 329 QYDSVTFLVALAAVA 343
             D VT++  L A +
Sbjct: 344 FPDDVTYVCVLNACS 358



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 116/224 (51%), Gaps = 7/224 (3%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA  + ++   + F+   L+ +Y++C S+  A ++F+ MP+++ ++W+S++A Y  +G  
Sbjct: 167 HAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFH 226

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF 195
                 E   +FR+ +          ++  +  C     +   + VH  + K G   + +
Sbjct: 227 E-----EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIY 281

Query: 196 VSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
           VS +L+++Y+K G IREA  +F G+ E R +VLW  M+  +A +    E   LF  + + 
Sbjct: 282 VSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQR 341

Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
           G  PDD +  CVL   S +G  HEE  + + + +  +N + +V+
Sbjct: 342 GFFPDDVTYVCVLNACSHMG-LHEEGQKYFDLMVRQHNLSPSVL 384



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 30/262 (11%)

Query: 152 ESITFTSRLT-LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           E++    R++ L  LL+LC  +         H   ++IGL  D   S  L+N+YSK   +
Sbjct: 35  ENVVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLV 94

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL-GV 269
             A+  F+ M  + +V W  ++ A  +N    E   L + + R G   ++ ++  VL   
Sbjct: 95  DSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNC 154

Query: 270 ISDLGKRHEEQVQAYAIKLLLYNN----------------------------NSNVVLWN 301
                     Q+ A++IK  + +N                              N V W+
Sbjct: 155 AFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWS 214

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
             ++GY+Q G +  A+  F N        D      A++A AG   L  G+Q+H  + KS
Sbjct: 215 SMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKS 274

Query: 362 GFYSAVIVGNSLINMYSKMGCV 383
           GF S + V +SLI+MY+K GC+
Sbjct: 275 GFGSNIYVSSSLIDMYAKCGCI 296



 Score = 39.3 bits (90), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD-RDLISWNSI 125
           + L+ GK  HA    S    + +++++L+ MY++CG +  A  +F  + + R ++ WN++
Sbjct: 259 ATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAM 318

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           ++ +A           E   LF  +++   F   +T   +L  C   G
Sbjct: 319 ISGFARHARA-----PEAMILFEKMQQRGFFPDDVTYVCVLNACSHMG 361


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 194/584 (33%), Positives = 296/584 (50%), Gaps = 50/584 (8%)

Query: 384 CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           C    +    A++LR S  L   +   +Q+H   + +    D+ ++T L+D+Y   G ++
Sbjct: 57  CPYPYNHNNYATILR-SCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVS 115

Query: 444 EAEYLF-ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKA 501
            A  LF E  +  ++  WN +I  Y        A+EL+  M   G    D  T    +KA
Sbjct: 116 VARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKA 175

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  LL L  G+++H   M++ +  D+ V +G++DMY KCG + +A ++F+     D V W
Sbjct: 176 CAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVW 235

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            +MI+ C  NG    AL++   M   G+ P   T    + A++   AL +GR++H    +
Sbjct: 236 NSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWR 295

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               S   +  SL+DMYAK G +  A +LF Q+  R  + WNAM+ G   HG+ +   +L
Sbjct: 296 RGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACEL 355

Query: 682 FEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           F  M+    V PD +TF+GVLSAC++ G+V EA E F LM   Y I+P V+HY+ LVD L
Sbjct: 356 FRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVL 415

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
           G +GR KEA ++I  M  +  + +  ALL  C++  + E  +    KL+ LEP D+  YV
Sbjct: 416 GHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYV 475

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFA 837
           LLSNI+A + +W++    R  M  + +KK  A                       D I+ 
Sbjct: 476 LLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYE 535

Query: 838 KVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK 897
           ++E L   I + GYVPDT  V  +VE++EK   +  HSE+LA A+GLISTPP + +L  K
Sbjct: 536 ELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTK 595

Query: 898 EPLYA-----------------------NRFHHLRDGMCPCADN 918
                                       NR+HH  +G C C D+
Sbjct: 596 NLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDH 639



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 7/207 (3%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + + +ILR  + +  +  G+  HAR+L S    D  L   L+ +Y+ CG +  ARRLFD+
Sbjct: 64  NNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDE 123

Query: 114 MPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLCLS 171
           MP++ ++  WN ++ AYA  G   A        L+R +    +      T  P+LK C +
Sbjct: 124 MPNQGNVFLWNVLIRAYARDGPREA-----AIELYREMLACGSMEPDNFTYPPVLKACAA 178

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              + A   VH   ++     D FV   L+++Y+K G + EA  +FD    RD V+W  M
Sbjct: 179 LLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSM 238

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCP 258
           + A  +NG   E   L  ++   G+ P
Sbjct: 239 IAACGQNGRPAEALALCRNMAAEGIAP 265



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 54/342 (15%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLG 351
           N  NV LWN  +  Y + G    AIE +  M+   +++ D+ T+   L A A   +L  G
Sbjct: 126 NQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAG 185

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------CGLR 387
           +++H   +++ + + V V   LI+MY+K GCV                        CG  
Sbjct: 186 REVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQN 245

Query: 388 ---TDQFTLASVLRASSSLPEGLHL---------------SKQIHVHAIKNDTVADSFVS 429
               +   L   + A    P  + L                +++H +  +    +   + 
Sbjct: 246 GRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLK 305

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           T+L+D+Y ++G +  A  LF+     +L +WNAMI G+ +  ++  A ELF  M    + 
Sbjct: 306 TSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQV 365

Query: 490 L-DEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGILDMYVKCGAM 543
           + D IT    + AC    M+++ K++       Y++K   +   C    ++D+    G  
Sbjct: 366 MPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTC----LVDVLGHSGRF 421

Query: 544 VDAQSIFND-IPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +A  +    +  PD   W  +++GC  +   +LA    H++
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKL 463



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 12/239 (5%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+   +  DL  G+  H R++ +S   D F+   L+ MY++CG +  A  +FD    RD
Sbjct: 172 VLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRD 231

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            + WNS++AA   +G        E   L R++       + +TL   +     +G +   
Sbjct: 232 AVVWNSMIAACGQNGRP-----AEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRG 286

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +HGY  + G    + +  +L+++Y+K G +  A+ LFD +  R+++ W  M+  +  +
Sbjct: 287 RELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMH 346

Query: 239 GFGEEVFHLFVDL-HRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAIKLLL 290
           G  +    LF  + + + + PD  +   VL      G++ +  +  +  V  Y+IK ++
Sbjct: 347 GHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMV 405


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 195/576 (33%), Positives = 301/576 (52%), Gaps = 54/576 (9%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY---L 448
           +L S L   +SL E     KQI   +IK     D  + T LI+   +N + A  +Y   L
Sbjct: 28  SLLSCLPKCTSLKE----LKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQL 83

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FE     D+  +N+M  GY  SN   KA+ LF          D+ T  + +KAC      
Sbjct: 84  FEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAF 143

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           +QGKQ+H  A+K G   +  V   +++MY  C  +  AQ +F++I  P  V++  +I+G 
Sbjct: 144 QQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY 203

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             +   + ALS++ Q++   + P++ T   ++ + + L AL+ G+ IH  + K       
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYV 263

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L+DMYAKCG+++ A  +F+ M +R+T  W+AM+V  A HG G++ + +FE+M   
Sbjct: 264 KVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARA 323

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            V+PD +TF+G+L ACS+TGLV E +  F+ M E YGI P ++HY  +VD LGRAG   E
Sbjct: 324 KVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHE 383

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + I  +P + +  + R LL +C   G+ E  K V  +++ L+      YV+LSN+ A 
Sbjct: 384 AYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCAR 443

Query: 809 ANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKR 845
           A +W+DV + R  M  K   K P                       +  +   ++ L+K 
Sbjct: 444 AGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKE 503

Query: 846 IKEGGYVPDTDFVL-LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI----------- 893
           +K  GYVPDT  V+  D+E+EEKE  L YHSEKLA ++GL++TPP + I           
Sbjct: 504 LKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGD 563

Query: 894 ----------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                     L ++E +     RFHH +DG C C D
Sbjct: 564 CHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGD 599



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 8/244 (3%)

Query: 18  VIFSSFTKDTYR-NLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
           V+F+S  +   R N P  ++SL  F++  +++       + S+L+  +       GK  H
Sbjct: 93  VLFNSMFRGYSRSNAPLKAISL--FIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLH 150

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
              +      + ++   L+ MY+ C  +  A+R+FD++ +  ++S+N+I+  YA S   N
Sbjct: 151 CLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPN 210

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
                E   LFR L+      + +T+  +L  C   G +   + +H Y  K GL     V
Sbjct: 211 -----EALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKV 265

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           + AL+++Y+K G +  A  +F+ M  RD   W  M+ AYA +G G++V  +F ++ R+ +
Sbjct: 266 NTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKV 325

Query: 257 CPDD 260
            PD+
Sbjct: 326 QPDE 329



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 141/350 (40%), Gaps = 54/350 (15%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA +L       ++VL+N    GY +      AI  F+  +  N+  D  TF   L A  
Sbjct: 79  YAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACV 138

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG------------------ 385
                  G+Q+H   +K G      V  +LINMY+    V G                  
Sbjct: 139 VAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNA 198

Query: 386 -------------------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                                    L+ +  T+ SVL +S +L   L L K IH +  KN
Sbjct: 199 IITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVL-SSCALLGALDLGKWIHEYVKKN 257

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                  V+TALID+Y + GS+  A  +FE+    D   W+AMI  Y +       + +F
Sbjct: 258 GLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMF 317

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILD 535
             M  +  + DEIT    + AC    ++ +G          Y +  G +   C    ++D
Sbjct: 318 EEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGC----MVD 373

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +  + G + +A    +++P  P  + W T++S C  +G  +LA  + +Q+
Sbjct: 374 LLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQI 423



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 138/340 (40%), Gaps = 38/340 (11%)

Query: 43  QKSHFSSSSSSSQWFSILRHAISTSDL--LLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           Q S + +++  S   S L    S  +L  +   S    + N  QI  + +  N  T    
Sbjct: 16  QHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLI--NSCTQNPT 73

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
             S+ YA +LF+ +P  D++ +NS+   Y+ S   NA    +   LF             
Sbjct: 74  TASMDYAHQLFEAIPQPDIVLFNSMFRGYSRS---NAP--LKAISLFIKALNYNLLPDDY 128

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   LLK C+ +      + +H  A+K+GL  + +V   L+N+Y+    +  A+ +FD +
Sbjct: 129 TFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEI 188

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
            E  VV +  ++  YA +    E   LF  L    L P+D +V  VL   +     DLGK
Sbjct: 189 LEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGK 248

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVL------------------------WNKKLSGYLQVG 311
              E V+   +   +  N + + +                        W+  +  Y   G
Sbjct: 249 WIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHG 308

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
                +  F  M R+ VQ D +TFL  L A + T  ++ G
Sbjct: 309 QGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEG 348


>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
          Length = 977

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 177/481 (36%), Positives = 268/481 (55%), Gaps = 58/481 (12%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M  +G R D+    +A KACG L     G+ +H++A+K+G++ D+ V S ++DMY KCG 
Sbjct: 1   MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + DA+ +F+++P  + V+W+ MI G    GE++ AL ++ Q  +  +  ++FTF+ +V+ 
Sbjct: 61  IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
               T LE G+QIH   +K    S  FVG SL+ +Y+KCG IEDAY++F ++ +RN  +W
Sbjct: 121 CGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMW 180

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NAML+  AQH + E+   LF+ M+  G++P+ +TF+ VL ACS+ GLV +    F LM+E
Sbjct: 181 NAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKE 240

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            YGIEP  +HY+ +VD LGRAG+ K+A  +I  MP E + S+  ALL  CR+ GDTE   
Sbjct: 241 -YGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELAS 299

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------- 832
           +VA+++  L P  S           AA ++++   AR  ++ + VKK+            
Sbjct: 300 FVADRVFELGPVSS-----------AAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRI 348

Query: 833 -------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLA 879
                          I+ K+E L + ++  GY+ DT FVL +V+ EEK + + YHSE+LA
Sbjct: 349 HTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLA 408

Query: 880 RAYGLISTPPSSVILSNKEPLYA-----------------------NRFHHLRDGMCPCA 916
            A+GLIS PP   I   K                            NRFH   DG C C 
Sbjct: 409 IAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCR 468

Query: 917 D 917
           D
Sbjct: 469 D 469



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 8/296 (2%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+R D     S  +A   L     + + +H  A+K     D FV ++++D+Y + G + +
Sbjct: 5   GVRPDDHIFPSATKACGILSR-CDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGD 63

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     ++ +W+ MI+GY       +AL LF         +++ T ++ V+ CG 
Sbjct: 64  ARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGN 123

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
             +L+ GKQ+H   +K+ ++    V S ++ +Y KCG + DA  +F++IP  +   W  M
Sbjct: 124 STLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAM 183

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--- 621
           +  C  +   + A  ++ QM   G+ P+  TF  ++ A S    +E+G Q +  L+K   
Sbjct: 184 LIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKG-QFYFELMKEYG 242

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGE 676
           ++  +  +   S+VD+  + G ++DA  + K+M M  T  +W A+L G   HG+ E
Sbjct: 243 IEPGAQHYA--SMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTE 296



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 113/210 (53%), Gaps = 5/210 (2%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +G+S H+  + +    D F+ ++++ MY++CG +  AR++FD+MPDR+++SW+ ++  Y+
Sbjct: 28  IGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYS 87

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             GE       E  RLF+         +  T + ++++C +S  +   + +HG  LK   
Sbjct: 88  QMGEDE-----EALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSY 142

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
               FV  +L+++YSK G I +A  +F  +  R++ +W  ML A A++   E+ F LF  
Sbjct: 143 DSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQ 202

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           +   G+ P+  +  CVL   S  G   + Q
Sbjct: 203 MEGVGMKPNFITFLCVLYACSHAGLVEKGQ 232



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 49/301 (16%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+ + V+ D   F  A  A       ++GQ +H   +K+G+   V VG+S+++MY+K G 
Sbjct: 1   MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60

Query: 383 VCGLR-------------------------------------------TDQFTLASVLR- 398
           +   R                                            + FT +SV+R 
Sbjct: 61  IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120

Query: 399 -ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
             +S+L   L L KQIH   +K    + SFV ++LI +Y + G + +A  +F      +L
Sbjct: 121 CGNSTL---LELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNL 177

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
             WNAM+       ++ KA +LF  M   G + + IT    + AC    ++++G+     
Sbjct: 178 GMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFEL 237

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDL 576
             + G E      + ++D+  + G + DA SI   +P  P +  W  +++GC  +G+ +L
Sbjct: 238 MKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTEL 297

Query: 577 A 577
           A
Sbjct: 298 A 298



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 6/176 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++R   +++ L LGK  H   L +S     F+ ++L+++YS+CG +  A  +F ++P R
Sbjct: 116 SVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIR 175

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +L  WN++L A A        +  + F LF+ +       + +T   +L  C  +G V  
Sbjct: 176 NLGMWNAMLIACAQHA-----HTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEK 230

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVML 232
            +       + G+        ++V++  + GK+++A  +   M  E    +W  +L
Sbjct: 231 GQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALL 286


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 206/591 (34%), Positives = 306/591 (51%), Gaps = 59/591 (9%)

Query: 382 CVCGLRTDQFTLASVL---RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           C  G+R +  TL++ L    A+ +L  G  L++ I   A++     DS V ++LI +Y R
Sbjct: 125 CSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALE----IDSHVESSLITMYGR 180

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
              + EAE  F+     D+  W AMI  Y  +  + +ALEL   M   G +L   T  + 
Sbjct: 181 CREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSL 240

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL-DMYVKCGAMVDAQSIFNDIPAPD 557
           + AC   + L+ G   H  A   G +    V +G L ++Y KCG + DA+ + + +P   
Sbjct: 241 LDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRT 300

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V+WT MI+    NG    A++++  M L G  P + T   +V + + L  L  G++IHA
Sbjct: 301 SVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHA 360

Query: 618 NLIKLDCSSDPFVGI-SLVDMYAKCGNIEDAYILFK--QMDMRNTVLWNAMLVGLAQHGN 674
            +      S   + + +++ MY KCGN+E A  +F+   +  R+ V W AM+   AQ+G 
Sbjct: 361 RIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGV 420

Query: 675 GEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           GEE ++LF++M   G  EP+ VTF+ VL ACS+ G + +A+E+F  M   +G+ P  +HY
Sbjct: 421 GEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHY 480

Query: 734 SFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
             LVD LGRAGR  EA +L+L    FEA      A L AC++ GD E  +  A+++  LE
Sbjct: 481 CCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELE 540

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK----------------------D 830
           P + +  VLLSN++AA  +  DV   R EMK   VKK                       
Sbjct: 541 PENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSH 600

Query: 831 PADL-IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
           P  L I++++E L + IKE GYVPDT  VL DV+EE+K + L YHSE+LA A G+ISTPP
Sbjct: 601 PRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPP 660

Query: 890 SSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
            + +   K                            +RFHH +DG+C C D
Sbjct: 661 GTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGD 711



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 3/357 (0%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
            GL   +++H          ++F+   L+D Y ++GS+  A+  F      +  +WN ++
Sbjct: 46  RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILM 105

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
             Y  + +   A  LF  M + G R + +T++TA+ AC     L  G++++        E
Sbjct: 106 AAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALE 165

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +D  V S ++ MY +C  + +A+  F+  P  D V WT MIS    N     AL +  +M
Sbjct: 166 IDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRM 225

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIH--ANLIKLDCSSDPFVGISLVDMYAKCG 642
            L G+     T+  L+ A +    L  G   H  A  I LD SS    G +LV++Y KCG
Sbjct: 226 DLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAG-TLVNLYGKCG 284

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            ++DA  +   M +R +V W AM+   AQ+GN  E + LF+ M   G EP  +T I V+ 
Sbjct: 285 RVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVD 344

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           +C+  G +S        +R        +   + ++   G+ G  + A E+   +P  
Sbjct: 345 SCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLR 401



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 164/379 (43%), Gaps = 59/379 (15%)

Query: 22  SFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWF-------------SILRHAISTSD 68
           +F + T  N  S+++ +  + Q  H   +++   W              + L    +  +
Sbjct: 89  AFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARN 148

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG+  +  I + +   D  + ++L+TMY RC  +  A R FD+ P++D++ W ++++A
Sbjct: 149 LALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISA 208

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YAH+        +    L R +          T   LL  C S+  +      H  A  I
Sbjct: 209 YAHNWR-----TSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAI 263

Query: 189 GLVWDE-FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           GL      V+G LVN+Y K G++ +A+ + D M  R  V W  M+ AYA+NG   E  +L
Sbjct: 264 GLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINL 323

Query: 248 FVDLHRSGLCPDDESV-----QC-VLGVISDLGKRHEEQVQ---AYAIKLLLYN------ 292
           F  +   G  P D ++      C VLG +S LGKR   +++   +++  L+L N      
Sbjct: 324 FQCMDLEGAEPSDITLISVVDSCAVLGTLS-LGKRIHARIRSSPSFSQSLMLLNAVITMY 382

Query: 293 ------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSV 333
                                +VV W   +  Y Q G    AIE F  M I    + + V
Sbjct: 383 GKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRV 442

Query: 334 TFLVALAAVAGTDNLNLGQ 352
           TFL  L A +     +LGQ
Sbjct: 443 TFLSVLCACS-----HLGQ 456



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 133/569 (23%), Positives = 214/569 (37%), Gaps = 111/569 (19%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA+I       + FL N L+  YS+ GSL  A+  F ++   +  SWN ++AAYA +
Sbjct: 52  RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G          +   + +R +    S   LA      L+ G    +E +   AL+I    
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK-LNELIASEALEI---- 166

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  V  +L+ +Y +  +I EA+  FD   E+DVV W  M+ AYA N        L   + 
Sbjct: 167 DSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMD 226

Query: 253 RSGL---CPDDESVQCVLGVISDLGKRHEEQVQAYAIKL------------LLYNNNSNV 297
             G+    P   S+        DL        +A AI L             LY     V
Sbjct: 227 LEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRV 286

Query: 298 ---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                          V W   ++ Y Q G+   AI  F  M     +   +T +  + + 
Sbjct: 287 DDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 346

Query: 343 AGTDNLNLGQQIHGTTLKS-GFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
           A    L+LG++IH     S  F  ++++ N++I MY K G                    
Sbjct: 347 AVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCG-------------------- 386

Query: 402 SLPEGLHLSKQI-HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
                L L++++     ++  +V      TA+I  Y +NG   E                
Sbjct: 387 ----NLELAREVFECVPLRTRSV---VTWTAMIRAYAQNGVGEE---------------- 423

Query: 461 NAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
                          A+ELF  M    G   + +T  + + AC  L  L+Q  + H  +M
Sbjct: 424 ---------------AIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSM 467

Query: 520 KSGFELD-----LCVSSGILDMYVKCGAMVDAQSIF---NDIPAPDDVAWTTMISGCVDN 571
              F +       C    ++D+  + G + +A+ +     D  A D V W   +S C  N
Sbjct: 468 GPDFGVPPAGDHYCC---LVDLLGRAGRLGEAEKLLLRHKDFEA-DVVCWIAFLSACQMN 523

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G  DL  S     R+S + P+     +L+
Sbjct: 524 G--DLERSQRAAKRVSELEPENVAGRVLL 550


>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 217/707 (30%), Positives = 346/707 (48%), Gaps = 73/707 (10%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDG 219
           +LA  L  C + G ++    +H   LK G++     +   L+ +YS+   +REA+ LF+ 
Sbjct: 8   SLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
           M +R+   W  M+  Y ++G   +   LF  +      P  ++    + VIS   K    
Sbjct: 68  MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM------PHKDAFSWNV-VISGFAKEGNL 120

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ-YDSVTFLVA 338
           +V       + + N    + WN  + GY   G    A+  F ++  + ++ +   TF++A
Sbjct: 121 EVARRLFNEMPWKNG---IAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLA 177

Query: 339 LAAVAGTD--NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASV 396
               A T+   L+ G+QIH   +        ++G+SL+N+Y K G +             
Sbjct: 178 TVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDI------------- 224

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
                S    L+L K+            D+F  +ALI  Y   G M +A  +F  K    
Sbjct: 225 ----DSANHVLNLMKE-----------PDAFSLSALISGYASCGRMNDARRIFCLKSNAC 269

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           +  WN+MI GY+ +N + +ALELF++M   G + D  T A+ + AC  L ++ QG Q+HA
Sbjct: 270 VVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHA 329

Query: 517 YAMKSGFELDLCVSSGILDMYVKC-------------------------------GAMVD 545
           +  K GF  D+ + S ++DMY KC                               G + D
Sbjct: 330 HVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDD 389

Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
           A+ IF+ +P+   ++W +MI G   N     AL ++ +M   G+  D+F+ A ++ A + 
Sbjct: 390 ARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACAS 449

Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
           +++LE G QI A    +    D  +  SLVD Y KCG +E    LF +M   + V WN+M
Sbjct: 450 ISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSM 509

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
           L+G A +G+G E L +F+ M++ GV+P  +TF+GVLSAC + GLV E  + F+ M+  Y 
Sbjct: 510 LMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYH 569

Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
           I P +EHYS +VD   RAG  ++A  LI  MP +A  SM  ++L  C   G+   GK VA
Sbjct: 570 INPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVA 629

Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           ++++ L+P +S AYV LS I+A    W      R  M  K + K P 
Sbjct: 630 KRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPG 676



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 147/606 (24%), Positives = 255/606 (42%), Gaps = 128/606 (21%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG---------------- 133
           + N L+ MYSRC S+  A++LF++MP R+  SWN+++  Y  SG                
Sbjct: 44  IGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKD 103

Query: 134 -------------EGNAE------------------NVTEGFRLFRSLRESITFTSRLTL 162
                        EGN E                  ++  G+      +E++     L+L
Sbjct: 104 AFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSL 163

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLV----------------WDEFVSGALVNIYSK 206
            PL + C   G  +   TV G    +G +                +D  +  +LVN+Y K
Sbjct: 164 NPLERFC---GDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGK 220

Query: 207 FGKIREAKFLFDGMQERD-------------------------------VVLWKVMLRAY 235
            G I  A  + + M+E D                               VVLW  M+  Y
Sbjct: 221 CGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGY 280

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIKLLLYNNN 294
             N    E   LF ++ R G+  D  +   VL   S LG   +  QV A+  K+   N  
Sbjct: 281 VANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTN-- 338

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQ 353
            ++++ +  +  Y +      A + F     S++Q YD++     +   +    ++  +Q
Sbjct: 339 -DIIIDSALVDMYSKCRRPDDACKLF-----SDLQAYDTILLNSMITVYSNCGRIDDARQ 392

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGC-------VC-----GLRTDQFTLASVLRASS 401
           I  T        ++I  NS+I  +S+  C        C     GLR D+F+LA V+ A +
Sbjct: 393 IFDTMPS----KSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACA 448

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           S+   L L +QI   A       D  +ST+L+D YC+ G +     LF+     D   WN
Sbjct: 449 SISS-LELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWN 507

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           +M+ GY  + +  +AL +F  M + G +  +IT    + AC    ++++G++   YAMK 
Sbjct: 508 SMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWF-YAMKL 566

Query: 522 GFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLAL 578
            + ++  +   S ++D+Y + G + DA ++   +P   D + W++++ GCV +G   L  
Sbjct: 567 DYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGK 626

Query: 579 SIYHQM 584
            +  ++
Sbjct: 627 KVAKRI 632



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 5/212 (2%)

Query: 77  ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
            ++ +  Q  D  L N+++T+YS CG +  AR++FD MP + LISWNS++  ++     N
Sbjct: 360 CKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQ----N 415

Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
           A  + E   LF  + +      + +LA ++  C S   +   E +   A  IGL +D+ +
Sbjct: 416 ACPI-EALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQII 474

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
           S +LV+ Y K G +   + LFD M + D V W  ML  YA NG G E  ++F  +   G+
Sbjct: 475 STSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGV 534

Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKL 288
            P D +   VL      G   E +   YA+KL
Sbjct: 535 QPTDITFVGVLSACDHCGLVEEGRKWFYAMKL 566


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 185/564 (32%), Positives = 302/564 (53%), Gaps = 51/564 (9%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S S+ +GL    Q+H + +K+       V+  LI+ Y ++    ++   FE+       T
Sbjct: 28  SRSIVKGL----QLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATT 83

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+++I  +  +     +LE    M     R D+  + +A K+CG L     GK +H  +M
Sbjct: 84  WSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSM 143

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           K+G++ D+ V S ++DMY KCG +V A+ +F+++P  + V W+ M+ G    GE + AL 
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALW 203

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           ++ +     +  ++++F+ ++   +  T LE GRQI    IK    S  FVG SLV +Y+
Sbjct: 204 LFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYS 263

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCG++E AY +F ++ MRN  +WNAML   AQH + ++ ++LF+ MK  G++P+ +TF+ 
Sbjct: 264 KCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           VL+ACS+ GLV E    F LM+E   IEP  +HY+ LVD LGRAG+ +EA E++ +MP +
Sbjct: 324 VLNACSHAGLVDEGKYYFDLMKESR-IEPTDKHYASLVDMLGRAGKLEEALEIVTNMPID 382

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
            + S+  ALL +C +  +TE   + A+K+  L P  S  ++ LSN +AA  +++D   AR
Sbjct: 383 PTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKAR 442

Query: 820 GEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTD 856
             ++ +  KK+                        +  I+ K+  L + +++ GYV DT 
Sbjct: 443 KLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTS 502

Query: 857 FVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-------------- 902
           +VL +V+ +EK + + YHSE+LA A+GLI+ P    I   K                   
Sbjct: 503 YVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICT 562

Query: 903 ---------NRFHHLRDGMCPCAD 917
                    NRFH   DG C C D
Sbjct: 563 RRVIIVRDNNRFHRFEDGKCSCND 586



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 112/205 (54%), Gaps = 7/205 (3%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +GKS H   + +    D F+ ++L+ MY++CG +VYAR++FD+MP R++++W+ ++  YA
Sbjct: 134 IGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYA 193

Query: 131 HSGEGNAENVTEGFRLFR-SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             GE       E   LF+ +L E++      + + ++ +C +S  +     + G  +K  
Sbjct: 194 QMGENE-----EALWLFKEALFENLAVND-YSFSTVISVCANSTLLELGRQIQGLCIKSS 247

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
                FV  +LV++YSK G +  A  +FD +  R++ +W  ML+A A++   ++V  LF 
Sbjct: 248 FDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFK 307

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG 274
            +  SG+ P+  +   VL   S  G
Sbjct: 308 RMKLSGMKPNFITFLNVLNACSHAG 332



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 134/325 (41%), Gaps = 46/325 (14%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           +Q   +L  +  +  ++ G   H  I+ S  S IP   + NNL+  YS+      +RR F
Sbjct: 16  NQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIP--LVANNLINFYSKSQLPFDSRRAF 73

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
           +  P +   +W+SI++ +A +     E         R +           L    K C  
Sbjct: 74  EDSPQKSATTWSSIISCFAQN-----ELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGI 128

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                  ++VH  ++K G   D FV  +LV++Y+K G+I  A+ +FD M  R+VV W  M
Sbjct: 129 LSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGM 188

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI 286
           +  YA+ G  EE   LF +     L  +D S   V+ V +     +LG+    Q+Q   I
Sbjct: 189 MYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGR----QIQGLCI 244

Query: 287 K-------------LLLYNNNS---------------NVVLWNKKLSGYLQVGDNHGAIE 318
           K             + LY+                  N+ +WN  L    Q       IE
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIE 304

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVA 343
            F  M  S ++ + +TFL  L A +
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACS 329



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 49/324 (15%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W+  +S + Q      ++E    M+  +++ D      A  +       ++G+ +H  ++
Sbjct: 84  WSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSM 143

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLR------------------- 398
           K+G+ + V VG+SL++MY+K G +   R   D+  L +V+                    
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALW 203

Query: 399 ------------------------ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                                   A+S+L   L L +QI    IK+   + SFV ++L+ 
Sbjct: 204 LFKEALFENLAVNDYSFSTVISVCANSTL---LELGRQIQGLCIKSSFDSSSFVGSSLVS 260

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + G +  A  +F+     +L  WNAM+      +++ K +ELF  M  SG + + IT
Sbjct: 261 LYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFIT 320

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
               + AC    ++ +GK       +S  E      + ++DM  + G + +A  I  ++P
Sbjct: 321 FLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMP 380

Query: 555 A-PDDVAWTTMISGCVDNGEEDLA 577
             P +  W  +++ C  +   +LA
Sbjct: 381 IDPTESVWGALLTSCTIHKNTELA 404



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 29/230 (12%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +HGY +K GL     V+  L+N YSK     +++  F+   ++    W  ++  +A+N  
Sbjct: 37  LHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNEL 96

Query: 241 GEEVFHLFVDLHRSGLCPDDE---SVQCVLGVIS--DLGKR---------HEEQV----- 281
                     +    L PDD    S     G++S  D+GK          ++  V     
Sbjct: 97  PWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSS 156

Query: 282 ----------QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                       YA K+       NVV W+  + GY Q+G+N  A+  F   +  N+  +
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
             +F   ++  A +  L LG+QI G  +KS F S+  VG+SL+++YSK G
Sbjct: 217 DYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCG 266



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 6/158 (3%)

Query: 57  FSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FS +    + S LL LG+      + SS     F+ ++L+++YS+CG L  A ++FD++P
Sbjct: 220 FSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVP 279

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R+L  WN++L A A     + + V E   LF+ ++ S    + +T   +L  C  +G V
Sbjct: 280 MRNLGIWNAMLKACAQ--HSHTQKVIE---LFKRMKLSGMKPNFITFLNVLNACSHAGLV 334

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
              +       +  +   +    +LV++  + GK+ EA
Sbjct: 335 DEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEA 372



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 6/188 (3%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           L+ +S+   ++ +G Q+H  ++K   S  P V  +L++ Y+K     D+   F+    ++
Sbjct: 21  LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS--EAYEN 716
              W++++   AQ+     +L+    M A  + PD         +C   G++S  +  ++
Sbjct: 81  ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSC---GILSRCDIGKS 137

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            H +  K G + +V   S LVD   + G    A ++   MP     +    + G  ++ G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQM-G 196

Query: 777 DTETGKWV 784
           + E   W+
Sbjct: 197 ENEEALWL 204


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 186/580 (32%), Positives = 299/580 (51%), Gaps = 54/580 (9%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R D  T    L A + L + L   + +   A       D FV ++L+ +Y R G+M +A 
Sbjct: 105 RPDSTTFTLALSACARLGD-LRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAV 163

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F+     D  TW+ M+ G++ +     A++++  M   G + DE+ +   ++AC    
Sbjct: 164 KVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAAR 223

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++ G  +H + ++ G  +D+  ++ ++DMY K G +  A  +F  +   +DV+W+ MIS
Sbjct: 224 NVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMIS 283

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LD 623
           G   NG+ D AL ++  M+ SG+ PD       + A S +  L+ GR +H  +++    +
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFN 343

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
           C     +G + +DMY+KCG++  A +LF  +  R+ +LWNAM+     HG G++ L LF+
Sbjct: 344 C----ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQ 399

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           +M   G+ PD  TF  +LSA S++GLV E    F  M   + I P  +HY  LVD L R+
Sbjct: 400 EMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARS 459

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  +EA +L+ SM  E + ++  ALL  C      E G+ +A+ ++ L+P D     L+S
Sbjct: 460 GLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVS 519

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           N++AA  +WD V   R  MK    KK P                        + I +KV 
Sbjct: 520 NLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVA 579

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN-- 896
            L   +++ GY+P T+FV  D+EEE KE+ L YHSEKLA A+GL++T P +  VI+ N  
Sbjct: 580 KLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLR 639

Query: 897 -----------------KEPLY--ANRFHHLRDGMCPCAD 917
                            +E +   A RFHH +DG+C C D
Sbjct: 640 VCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRD 679



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 195/418 (46%), Gaps = 50/418 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+S   R  ++    D F+ ++L+ +Y+R G++  A ++FD+MP RD ++W++++A
Sbjct: 123 DLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVA 182

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            +  +G+       +  +++R +RE       + +  +++ C ++  V    +VHG+ L+
Sbjct: 183 GFVSAGQP-----LDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLR 237

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G+  D   + +LV++Y+K G +  A  +F  M  R+ V W  M+  +A+NG  +E   L
Sbjct: 238 HGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRL 297

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           F ++  SG+ PD  ++   L   S++G  +    V  + ++   +    N +L    +  
Sbjct: 298 FRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF----NCILGTAAIDM 353

Query: 307 YLQVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           Y + G    A   F NMI  R  + ++++      A   G D L L Q+++ T       
Sbjct: 354 YSKCGSLASAQMLF-NMISDRDLILWNAMIACCG-AHGRGQDALTLFQEMNET------- 404

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA--SSSLPEGLHLSKQIHVHAIKNDT 422
                               G+R D  T AS+L A   S L E   L     V+  K   
Sbjct: 405 --------------------GMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITP 444

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFGYILSNNSHKALEL 479
               +V   L+D+  R+G + EA  L  + K    +A W A++ G +  NN  K LEL
Sbjct: 445 AEKHYV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCL--NN--KKLEL 496



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 114/218 (52%), Gaps = 6/218 (2%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
             +++   +  ++ +G S H  +L      D     +L+ MY++ G L  A R+F  M  
Sbjct: 213 IGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVH 272

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+ +SW+++++ +A +G+ +     E  RLFR+++ S        L   L  C + G++ 
Sbjct: 273 RNDVSWSAMISGFAQNGQSD-----EALRLFRNMQASGIQPDSGALVSALLACSNIGFLK 327

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
              +VHG+ ++    ++  +  A +++YSK G +  A+ LF+ + +RD++LW  M+    
Sbjct: 328 LGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCG 386

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +G G++   LF +++ +G+ PD  +   +L  +S  G
Sbjct: 387 AHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSG 424


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 194/584 (33%), Positives = 305/584 (52%), Gaps = 44/584 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLG 351
           N   + LWN  ++GY +      A+E F  ++    ++ DS T+     A  G     LG
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK------------------MGC-----VCGLRT 388
           + IH   +K+G    ++VG+SL+ MY K                  + C      C  ++
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 389 DQFTLA-----------------SVLRASSSLPEGLHLSK--QIHVHAIKNDTVADSFVS 429
             F  A                 ++  A SS    L L++  +IH   I +  + DSF+S
Sbjct: 186 GNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           +AL+D+Y + G +  A  +FE      +  WN+MI GY L  +    ++LF  M+  G +
Sbjct: 246 SALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVK 305

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
               T+++ +  C     L +GK +H Y +++  + D+ V+S ++D+Y KCG +  A+ I
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKI 365

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F  IP    V+W  MISG V  G+   AL ++ +MR S V  D  TF  ++ A S L AL
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAAL 425

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           E+G++IH  +I+    ++  V  +L+DMYAKCG +++A+ +FK +  R+ V W +M+   
Sbjct: 426 EKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
             HG+    L+LF +M    V+PD V F+ +LSAC + GLV E    F+ M   YGI P 
Sbjct: 486 GSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPR 545

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEKL 788
           VEHYS L+D LGRAGR  EA E++   P       +   L  ACR+  + + G  +A  L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           +  +P DSS Y+LLSN++A+A++WD+V   R +MK   +KK+P 
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 189/375 (50%), Gaps = 12/375 (3%)

Query: 389 DQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           D   L  +LRA   S SL +G  + +++    ++ND     F+   LI+ Y        A
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDI----FLCKTLINQYLSCHLYDHA 57

Query: 446 EYLFEN-KDGFDLATWNAMIFGYILSNNSHKALELFSH-MHTSGERLDEITIATAVKACG 503
           + +F+N ++  +++ WN ++ GY  +    +ALELF   +H    + D  T  +  KACG
Sbjct: 58  KCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACG 117

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L     GK +H   +K+G  +D+ V S ++ MY KC A   A  +FN++P  D   W T
Sbjct: 118 GLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNT 177

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           +IS    +G    AL  +  MR  G  P+  T    + + + L  L +G +IH  LI   
Sbjct: 178 VISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSG 237

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
              D F+  +LVDMY KCG++E A  +F+QM  +  V WN+M+ G    G+    ++LF+
Sbjct: 238 FLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFK 297

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTG-LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
            M   GV+P   T   ++  CS +  L+   + + + +R +  I+P+V   S L+D   +
Sbjct: 298 RMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR--IQPDVFVNSSLMDLYFK 355

Query: 743 AGRTKEAGELILSMP 757
            G+ + A ++   +P
Sbjct: 356 CGKVELAEKIFKLIP 370



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 155/669 (23%), Positives = 266/669 (39%), Gaps = 94/669 (14%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           + +   +LR  +++  L  GK  H +++      D FL   L+  Y  C    +A+ +FD
Sbjct: 3   TRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFD 62

Query: 113 KMPDRDLIS-WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTLAPLLKLCL 170
            M +   IS WN ++A Y  +         E   LF  L           T   + K C 
Sbjct: 63  NMENPCEISLWNGLMAGYTKN-----YMYVEALELFEKLLHYPYLKPDSYTYPSVFKACG 117

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
                   + +H   +K GL+ D  V  +LV +Y K     +A +LF+ M E+DV  W  
Sbjct: 118 GLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNT 177

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS---DLGKR---HEEQVQA- 283
           ++  Y ++G  ++    F  + R G  P+  ++   +   +   DL +    HEE + + 
Sbjct: 178 VISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSG 237

Query: 284 ----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
                                  AI++        VV WN  +SGY   GD    I+ F 
Sbjct: 238 FLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFK 297

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            M    V+    T    +   + +  L  G+ +HG T+++     V V +SL+++Y K G
Sbjct: 298 RMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCG 357

Query: 382 CV----------------------------------CGL---------RTDQFTLASVLR 398
            V                                   GL          +D  T  SVL 
Sbjct: 358 KVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLT 417

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A S L   L   K+IH   I+     +  V  AL+D+Y + G++ EA  +F+     DL 
Sbjct: 418 ACSQLA-ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQ 513
           +W +MI  Y    +++ ALELF+ M  S  + D +     + ACG   ++ +G     + 
Sbjct: 477 SWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQM 536

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVA-WTTMISGCVDN 571
           ++ Y +    E   C    ++D+  + G + +A  I    P   DDV   +T+ S C  +
Sbjct: 537 INVYGIIPRVEHYSC----LIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
              DL   I   + +     D  T+ +L    +     ++ R + + + +L    +P  G
Sbjct: 593 RNIDLGAEIARTL-IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNP--G 649

Query: 632 ISLVDMYAK 640
            S +++  K
Sbjct: 650 CSWIEINQK 658



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 197/460 (42%), Gaps = 55/460 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G   H  ++NS  + D F+++ L+ MY +CG L  A  +F++MP + +++WNS+++
Sbjct: 222 DLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMIS 281

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            Y   G+     +    +LF+ +       +  TL+ L+ +C  S  +   + VHGY ++
Sbjct: 282 GYGLKGD-----IISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR 336

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             +  D FV+ +L+++Y K GK+  A+ +F  + +  VV W VM+  Y   G   E   L
Sbjct: 337 NRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGL 396

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN------------- 293
           F ++ +S +  D  +   VL   S L    + +++    I+  L NN             
Sbjct: 397 FSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAK 456

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            ++V W   ++ Y   G  +GA+E F  M++SNV+ D V FL  
Sbjct: 457 CGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAI 516

Query: 339 LAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVI--VGNS--LINMYSKMGCVCGLR 387
           L+A         G    N    ++G   +   YS +I  +G +  L   Y  +     +R
Sbjct: 517 LSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIR 576

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-- 445
            D   L S L ++  L   + L  +I    I  D   DS     L ++Y       E   
Sbjct: 577 -DDVELLSTLFSACRLHRNIDLGAEIARTLIDKDP-DDSSTYILLSNMYASAHKWDEVRV 634

Query: 446 ------EYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                 E   +   G      N  I  + + +NSH  LEL
Sbjct: 635 VRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLEL 674



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 5/271 (1%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   +   ++AC     LKQGK +H   +  G + D+ +   +++ Y+ C     A+ +
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60

Query: 550 FNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYHQ-MRLSGVVPDEFTFAILVKASSCLT 607
           F+++  P +++ W  +++G   N     AL ++ + +    + PD +T+  + KA   L 
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
               G+ IH  LIK     D  VG SLV MY KC   E A  LF +M  ++   WN ++ 
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGI 726
              Q GN ++ L+ F  M+  G EP+SVT    +S+C+    ++   E +  L+   + +
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +  +   S LVD  G+ G  + A E+   MP
Sbjct: 241 DSFIS--SALVDMYGKCGHLEMAIEIFEQMP 269



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 26/243 (10%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L L   ++KS+  S + +  + S+L      + L  GK  H  I+      +  +   L
Sbjct: 393 ALGLFSEMRKSYVESDAIT--FTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGAL 450

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY++CG++  A  +F  +P RDL+SW S++ AY   G            LF  + +S 
Sbjct: 451 LDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYG-----ALELFAEMLQSN 505

Query: 155 TFTSRLTLAPLLKLCLSSGYV-----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
               R+    +L  C  +G V     + ++ ++ Y    G++        L+++  + G+
Sbjct: 506 VKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVY----GIIPRVEHYSCLIDLLGRAGR 561

Query: 210 IREAKFLFDGMQE--RDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
           + EA  +     E   DV L   +    R +     G E+    +D       PDD S  
Sbjct: 562 LHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKD-----PDDSSTY 616

Query: 265 CVL 267
            +L
Sbjct: 617 ILL 619


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 215/723 (29%), Positives = 353/723 (48%), Gaps = 105/723 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR---SNVQYDSVTFLVALAAVAGTDNLNLGQ 352
           N+V WN  ++    V D    +E F + +         D  T +  L   A       G+
Sbjct: 129 NLVSWNALMAA---VADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGR 185

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC---------------------------- 384
            +HG  +KSG+ +A  V N L++MY+K G +                             
Sbjct: 186 AVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYA 245

Query: 385 --------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT-V 423
                               G+  D+ T+ SVL   S LPE   L +++H   ++    +
Sbjct: 246 RNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKL-RELHAFVVRRGLHL 304

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
               V  ALI  Y R G +  A  +F+      +++WNA+I  +  +  +  A+ELF  M
Sbjct: 305 TGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREM 364

Query: 484 -HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
            +  G++ D  +I + + ACG L  L  GK  H + +++G E D  +   +L +Y++CG 
Sbjct: 365 TNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGR 424

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILV 600
              A+ +F+ +   D+V+W TMI+G   NG    +L ++ +M  +  G  P        +
Sbjct: 425 ESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSAL 484

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A S L A+  G+++H   +K D   D F+  S++DMY+KCG+++DA + F ++  ++ V
Sbjct: 485 VACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAV 544

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W  M+ G A +G G+E + L++ M   G+EPD  T++G+L AC + G++ +    F  M
Sbjct: 545 SWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEM 604

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           R    IE ++EHY+ ++  L RAGR  +A  L+  MP E  A +  ++L AC + G+ E 
Sbjct: 605 RNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVEL 664

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------AD 833
           GK VA+KL+ LEP  +  YVL SN++A + QWD++   R  ++   V K+P       A 
Sbjct: 665 GKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAG 724

Query: 834 LIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
            +++ V G                L ++I+  GY PDT  +L ++EEEEK  AL +HSEK
Sbjct: 725 KVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEK 784

Query: 878 LARAYGLISTP-PSSV--------------------ILSNKEPLYAN--RFHHLRDGMCP 914
            A A+GL+ T  P+ V                     ++++E +  +  RFHH RDG+C 
Sbjct: 785 QAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCS 844

Query: 915 CAD 917
           C D
Sbjct: 845 CGD 847



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 173/584 (29%), Positives = 285/584 (48%), Gaps = 57/584 (9%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D F+ N+L++MY RCG +  A ++F+ M  R+L+SWN+++AA A        +   G  L
Sbjct: 98  DPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA--------DPRRGLEL 149

Query: 147 FRSLRESITFTS---RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD--EFVSGALV 201
           FR   E +  T+     TL  +L +C +  +      VHG A+K G  WD    VS  LV
Sbjct: 150 FRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSG--WDAAPRVSNVLV 207

Query: 202 NIYSKFGKIREAKFLF---DGMQERDVVLWKVMLRAYAENGFGEEVFHLF--VDLHRSGL 256
           ++Y+K G++ +A+  F        R+VV W VML  YA NG     F L   + +   G+
Sbjct: 208 DMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGV 267

Query: 257 CPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHG 315
             D+ ++  VL V S L +  +  ++ A+ ++  L+     V   N  ++ Y + G    
Sbjct: 268 PADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVP--NALIAAYGRCG---- 321

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
              C ++  R    +D +           +  ++    + G   ++G  SA       I 
Sbjct: 322 ---CLLHACRV---FDGIC----------SKMVSSWNALIGAHAQNGEASAA------IE 359

Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
           ++ +M   CG + D F++ S+L A  +L   LH  K  H   ++N    DSF+  +L+ V
Sbjct: 360 LFREMTNACGQKPDWFSIGSLLLACGNLKHLLH-GKAAHGFILRNGLEKDSFIRVSLLSV 418

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT--SGERLDEI 493
           Y + G  + A  LF+  +  D  +WN MI GY  +    ++L+LF  M +   G     +
Sbjct: 419 YIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLL 478

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
              +A+ AC  L  ++ GK+MH +A+K+    D  +SS I+DMY KCG++ DA+  F+ +
Sbjct: 479 AATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRL 538

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
            A D V+WT MI+G   NG    A+ +Y +M   G+ PD FT+  L+ A      LE G 
Sbjct: 539 KAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGL 598

Query: 614 ---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
              Q   NL K++   + +  +  + M ++ G   DA  L + M
Sbjct: 599 CFFQEMRNLPKIEAKLEHYACV--IGMLSRAGRFADAVALMEVM 640



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 165/332 (49%), Gaps = 21/332 (6%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
           G+  D+FTL   L++           +Q+H  A K      D FV  +L+ +Y R G + 
Sbjct: 62  GVAPDRFTLPPALKSCRG-----DDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVD 116

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH-MHTSGERL--DEITIATAVK 500
           +AE +FE   G +L +WNA++       +  + LELF   +   G     DE T+ T + 
Sbjct: 117 DAEKVFEGMAGRNLVSWNALMAAVA---DPRRGLELFRDCLEDLGGTAAPDEATLVTVLP 173

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP---APD 557
            C  L   + G+ +H  A+KSG++    VS+ ++DMY KCG M DA+  F + P     +
Sbjct: 174 MCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRN 233

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLS--GVVPDEFTFAILVKASSCLTALEQGRQI 615
            V+W  M+ G   NGE   A  +  +M++   GV  DE T   ++   S L  L + R++
Sbjct: 234 VVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLREL 293

Query: 616 HANLIK--LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           HA +++  L  + D  V  +L+  Y +CG +  A  +F  +  +    WNA++   AQ+G
Sbjct: 294 HAFVVRRGLHLTGD-MVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNG 352

Query: 674 NGEETLKLFEDM-KAHGVEPDSVTFIGVLSAC 704
                ++LF +M  A G +PD  +   +L AC
Sbjct: 353 EASAAIELFREMTNACGQKPDWFSIGSLLLAC 384



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 10/217 (4%)

Query: 48  SSSSSSSQWFSILRHAISTSDL---LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           ++      WFSI    ++  +L   L GK+ H  IL +    D F+  +L+++Y +CG  
Sbjct: 366 NACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRE 425

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTL 162
             AR LFD + ++D +SWN+++A Y+ +G        E  +LFR +  ++   + S L  
Sbjct: 426 SLARVLFDAVEEKDEVSWNTMIAGYSQNGLPG-----ESLQLFREMQSKKGGHWPSLLAA 480

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
              L  C     V   + +H +ALK  L  D F+S +++++YSK G + +A+  FD ++ 
Sbjct: 481 TSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKA 540

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +D V W VM+  YA NG G+E   L+  + R G+ PD
Sbjct: 541 KDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPD 577



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 122/558 (21%), Positives = 216/558 (38%), Gaps = 114/558 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD---RDLISWNSILAA 128
           G++ H   + S       ++N L+ MY++CG +  A   F + P    R+++SWN +L  
Sbjct: 184 GRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGG 243

Query: 129 YAHSGEGNAENVTEGFRLFRSLR--ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           YA +GE  A      F L R ++  E       +T+  +L +C     +     +H + +
Sbjct: 244 YARNGEAGA-----AFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVV 298

Query: 187 KIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
           + GL +  + V  AL+  Y + G +  A  +FDG+  + V  W  ++ A+A+NG      
Sbjct: 299 RRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAI 358

Query: 246 HLFVDLHRS-GLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNN--------- 294
            LF ++  + G  PD  S+  +L    +L    H +    + ++  L  ++         
Sbjct: 359 ELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSV 418

Query: 295 -------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
                               + V WN  ++GY Q G    +++ F  M +S       + 
Sbjct: 419 YIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREM-QSKKGGHWPSL 477

Query: 336 LVALAAVAGTDNL---NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFT 392
           L A +A+     L    LG+++H   LK+       + +S+I+MYSK    CG   D   
Sbjct: 478 LAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSK----CGSVDDARV 533

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
               L+A                         D+   T +I  Y  NG   E        
Sbjct: 534 FFDRLKAK------------------------DAVSWTVMITGYAVNGRGKE-------- 561

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG- 511
                                  A+ L+  M   G   D  T    + ACG   ML+ G 
Sbjct: 562 -----------------------AVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGL 598

Query: 512 ---KQMHAYA-MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMIS 566
              ++M     +++  E   CV    + M  + G   DA ++   +P  PD    ++++S
Sbjct: 599 CFFQEMRNLPKIEAKLEHYACV----IGMLSRAGRFADAVALMEVMPEEPDAKILSSVLS 654

Query: 567 GCVDNGEEDLALSIYHQM 584
            C  +GE +L   +  ++
Sbjct: 655 ACHMHGEVELGKKVADKL 672



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 10/201 (4%)

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLS--GVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           W  +++     G    AL+I  ++  +  GV PD FT    +K  SC    + GRQ+HA 
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALK--SCRG--DDGRQVHAV 88

Query: 619 LIKLDCS-SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             KL  +  DPFVG SLV MY +CG ++DA  +F+ M  RN V WNA++  +A    G E
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148

Query: 678 TLK-LFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
             +   ED+      PD  T + VL  C+      E     H +  K G +      + L
Sbjct: 149 LFRDCLEDLGGTAA-PDEATLVTVLPMCAALAW-PETGRAVHGLAVKSGWDAAPRVSNVL 206

Query: 737 VDALGRAGRTKEAGELILSMP 757
           VD   + G   +A    L  P
Sbjct: 207 VDMYAKCGEMADAECAFLEAP 227


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 240/827 (29%), Positives = 386/827 (46%), Gaps = 101/827 (12%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A LL+ C       A + VH + L  G   + ++   L+ +Y+K G + +A  +F+ +  
Sbjct: 30  ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPN 89

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---- 278
            +V  W  ++ AYA+ G   EV  LF  +   G  PD      VL   S  G  +E    
Sbjct: 90  PNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAI 149

Query: 279 ----------EQVQAYAIKLLLYNN---------------NSNVVLWNKKLSGYLQVGDN 313
                      QV   AI + LY                   N+V WN  ++   Q G  
Sbjct: 150 HDCAVLAGMETQVVGNAI-VNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHC 208

Query: 314 HGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             A++ F  M +  +V+ +  TF+  + A +   +L  G+  H   +++GF S + VGNS
Sbjct: 209 KDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNS 268

Query: 373 LINMYSKMGCVCGLRTDQFTLAS-----------------VLRASSSL------------ 403
           L+NMY K G V   R     ++S                  +RA+  L            
Sbjct: 269 LVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVT 328

Query: 404 ----------PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-- 451
                     PE L  ++QIH H + +   +D+ +   L+ +Y + GS+  A  +FEN  
Sbjct: 329 FMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLK 388

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
           +   +  TWNAMI G      S +ALE F  M   G R + +T   +++AC  L  L +G
Sbjct: 389 ERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRG 448

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +Q+HA  +      +  +S+ +++MY KCG++ +A   F  +P  D V+W TMI+    +
Sbjct: 449 RQLHARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQH 507

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL-IKLDC-SSDPF 629
           G    AL  + QM L G   D  T+   + A   + +L  G+ IH+ +     C   DP 
Sbjct: 508 GSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPG 567

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           V  +LV MYA+CG++ DA  +F +   RN V W+ ++   AQHG   E L LF +M+  G
Sbjct: 568 VATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQG 627

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
            +PD++TF  +++ACS  G+V +    F  M E Y I    +H+  +VD LGRAG  +EA
Sbjct: 628 TKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEA 687

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY----VLLSNI 805
            +++   P    A  H  LLGAC V GD E G  +A+  + L+  +S+++     +L+ +
Sbjct: 688 EQVMRKNP---CALAHAVLLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAEL 744

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGG---YVPDTDFVL--- 859
           + AA +W+D    R  ++ +N +++P    + +V+  +    E       P  D +    
Sbjct: 745 YGAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRVHEFGEDDDRLQGPRLDKIRGEL 804

Query: 860 -----LDVEE-----EEKERALYY---HSEKLARAYGLISTPPSSVI 893
                L VEE     +E  RA      HSEK+A  +G++STP   +I
Sbjct: 805 QRLSSLAVEEGGICKDENARAHILGCCHSEKVAIGFGIVSTPAGQLI 851



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 129/244 (52%), Gaps = 15/244 (6%)

Query: 471 NNSHKALELFSHMHT---SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           N +   L L +H++    S E L     A+ ++ C        GK +H + + SG  ++ 
Sbjct: 2   NPAATELSLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNR 61

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            + + ++ MY KCG + DA  +F  +P P+  +WT +I+     G     L ++ +M+L 
Sbjct: 62  YIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLD 121

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS-----SDPFVGISLVDMYAKCG 642
           G  PD F F+ ++ A S   AL +G+ IH      DC+         VG ++V++Y KCG
Sbjct: 122 GTKPDAFVFSTVLTACSSAGALNEGKAIH------DCAVLAGMETQVVGNAIVNLYGKCG 175

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVL 701
            + +A  +F+++  RN V WNA++   AQ+G+ ++ +++F  M   G V P+  TF+ V+
Sbjct: 176 RVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVV 235

Query: 702 SACS 705
            ACS
Sbjct: 236 DACS 239



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 3/184 (1%)

Query: 575 DLALSIY-HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
           +L+L  + +Q++ S        +A L++  +   +   G+ +H +++   C  + ++   
Sbjct: 7   ELSLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNH 66

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+ MYAKCG +EDA  +F+ +   N   W A++   A+ G+  E L LF  M+  G +PD
Sbjct: 67  LIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPD 126

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
           +  F  VL+ACS  G ++E  +  H      G+E +V   + +V+  G+ GR  EA  + 
Sbjct: 127 AFVFSTVLTACSSAGALNEG-KAIHDCAVLAGMETQVVGNA-IVNLYGKCGRVHEAKAVF 184

Query: 754 LSMP 757
             +P
Sbjct: 185 ERLP 188


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 204/573 (35%), Positives = 297/573 (51%), Gaps = 51/573 (8%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           L+ +LRASSS P+ L   K+IH   ++      + + T L++     G M  A  +F+  
Sbjct: 13  LSELLRASSSKPKQL---KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM 69

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
               +  WN +  GY+ +    ++L L+  M   G R DE T    VKA   L     G 
Sbjct: 70  HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF 129

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +HA+ +K GF     V++ ++ MY+K G +  A+ +F  +   D VAW   ++ CV  G
Sbjct: 130 ALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG 189

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
              +AL  +++M    V  D FT   ++ A   L +LE G +I+    K +   +  V  
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           + +DM+ KCGN E A +LF++M  RN V W+ M+VG A +G+  E L LF  M+  G+ P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREK--YGIEPEVEHYSFLVDALGRAGRTKEAG 750
           + VTF+GVLSACS+ GLV+E    F LM +     +EP  EHY+ +VD LGR+G  +EA 
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           E I  MP E    +  ALLGAC V  D   G+ VA+ L+   P   S +VLLSNI+AAA 
Sbjct: 370 EFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAG 429

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
           +WD V   R +M++   KK  A                         I+ K++ ++K+I+
Sbjct: 430 KWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
           + GYVPDT  V  DVE EEKE +L +HSEKLA A+GLI   P   I              
Sbjct: 490 KMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHA 549

Query: 894 -------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                  L++ E +    NRFHH R+G+C C +
Sbjct: 550 FSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKE 582



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 169/391 (43%), Gaps = 22/391 (5%)

Query: 13  HKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLG 72
           HK    ++++  K   RN   F  SLL + +            +  +++      D   G
Sbjct: 70  HKPRIFLWNTLFKGYVRNQLPFE-SLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG 128

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
            + HA ++         +   L+ MY + G L  A  LF+ M  +DL++WN+ LA    +
Sbjct: 129 FALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G  N+    E F   +   +++ F S  T+  +L  C   G +   E ++  A K  +  
Sbjct: 189 G--NSAIALEYFN--KMCADAVQFDS-FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           +  V  A ++++ K G    A+ LF+ M++R+VV W  M+  YA NG   E   LF  + 
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
             GL P+  +   VL   S  G  +E +       L++ +N+ N+    +  +  + +  
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGK---RYFSLMVQSNDKNLEPRKEHYACMVDLLG 360

Query: 313 NHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS----GFYSAV 367
             G +E     I+   V+ D+  +   L A A   ++ LGQ++    +++    G Y  +
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420

Query: 368 IVGNSLINMYSKMG---CVCGLRTDQFTLAS 395
                L N+Y+  G   CV  +R+    L +
Sbjct: 421 -----LSNIYAAAGKWDCVDKVRSKMRKLGT 446



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 35/338 (10%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           + Q  S L  A S+    L K  HA +L +       L   L+      G + YAR++FD
Sbjct: 9   TKQMLSELLRASSSKPKQL-KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +M    +  WN++   Y  +     +   E   L++ +R+        T   ++K     
Sbjct: 68  EMHKPRIFLWNTLFKGYVRN-----QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G       +H + +K G      V+  LV +Y KFG++  A+FLF+ MQ +D+V W   L
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFL 182

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-----------RHEE-- 279
               + G        F  +    +  D  +V  +L     LG            R EE  
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242

Query: 280 ---QVQAYAIKLLLYNNNS-------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
               V+   + + L   N+             NVV W+  + GY   GD+  A+  F  M
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
               ++ + VTFL  L+A +    +N G++     ++S
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 192/590 (32%), Positives = 310/590 (52%), Gaps = 59/590 (10%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           L  ++ T    +++ SSL + L   KQIH  A      +D FV++ALID+Y + G + +A
Sbjct: 82  LHPNRSTFPCTIKSCSSLYD-LCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDA 140

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-----------RLDEIT 494
             LF+     ++ +W +MI GY+ +  + +A+ LF       E            +D + 
Sbjct: 141 RKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVL 200

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +   + AC  + +    + +H  A+K GFE  L V + ++D Y KCG +  ++ +F+ + 
Sbjct: 201 LGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME 260

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGR 613
             D  +W ++I+    NG    A S++  M   G V  +  T + ++ A +   AL+ G+
Sbjct: 261 ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
            IH  ++K++   +  VG S+VDMY KCG +E A   F ++  +N   W  M+ G   HG
Sbjct: 321 CIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHG 380

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
           +G+E +K+F +M   G++P+ +TF+ VL+ACS+ GL+ E +  F+ M+ ++ +EP +EHY
Sbjct: 381 HGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY 440

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           S +VD LGRAG  KEA  LI  M  +    +  +LLGACR+  + E G+  A KL  L+P
Sbjct: 441 SCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDP 500

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------- 832
            +   YVLLSNI+A A +WDDV   R  MK   + K P                      
Sbjct: 501 SNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHP 560

Query: 833 --DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPS 890
             + I+  ++ L  +++E GY+P+   VL DV+ EEK   L  HSEKLA A+G++++ P 
Sbjct: 561 QHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPG 620

Query: 891 SVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           SVI                     + N+E +   + RFHH +DG+C C D
Sbjct: 621 SVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGD 670



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 13/309 (4%)

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           D   + +WN++I  +  S +S +AL  FS M       +  T    +K+C  L  L  GK
Sbjct: 47  DKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGK 106

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           Q+H  A   G+  D+ V+S ++DMY KCG + DA+ +F++IP  + V+WT+MISG V N 
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166

Query: 573 EEDLALSI-----------YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
               A+ +           Y ++   GV  D      ++ A + +        +H   +K
Sbjct: 167 RAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK 226

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                   VG +L+D YAKCG I  +  +F  M+  +   WN+++   AQ+G   E   L
Sbjct: 227 KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286

Query: 682 FEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           F DM   G V  ++VT   VL AC+++G + +  +  H    K  +E  +   + +VD  
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGAL-QIGKCIHDQVVKMELEDNLVVGTSIVDMY 345

Query: 741 GRAGRTKEA 749
            + GR + A
Sbjct: 346 CKCGRVEMA 354



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 192/466 (41%), Gaps = 64/466 (13%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARI 79
           ++S   D  R+  S   +L  F      S   + S +   ++   S  DL  GK  H + 
Sbjct: 54  WNSIIADFARSGDSLQ-ALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 80  LNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAEN 139
                  D F+ + L+ MYS+CG L  AR+LFD++P+R+++SW S+++ Y  +     E 
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN-----ER 167

Query: 140 VTEGFRLFRS-----------LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
             E   LF+            +         + L  ++  C        +E VHG A+K 
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G      V   L++ Y+K G+I  ++ +FDGM+E DV  W  ++  YA+NG   E F LF
Sbjct: 228 GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLF 287

Query: 249 VDLHRSGLCPDDES------VQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNK 302
            D+ + G    +        + C       +GK   +QV    +K+ L     N+V+   
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV----VKMEL---EDNLVVGTS 340

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG 362
            +  Y + G    A + F  + R NV+  S T +VA            G   HG      
Sbjct: 341 IVDMYCKCGRVEMARKAFDRLKRKNVK--SWTVMVA----------GYGMHGHGKEAMKV 388

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIK 419
           FY  +                CG++ +  T  SVL A S    L EG H   ++     +
Sbjct: 389 FYEMI---------------RCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKC---E 430

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLF-ENKDGFDLATWNAMI 464
            D        + ++D+  R G + EA  L  E K   D   W +++
Sbjct: 431 FDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476


>gi|242055533|ref|XP_002456912.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
 gi|241928887|gb|EES02032.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
          Length = 648

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 175/508 (34%), Positives = 275/508 (54%), Gaps = 33/508 (6%)

Query: 385 GLRTDQFTLASVLRASSSLPE--GLHLSKQIHVHAIKNDTVAD-SFVSTALIDVYCRNGS 441
           GLR + FT  S  +A++S P      +  Q+H  A++   + D +FVS A +D+Y + G 
Sbjct: 110 GLRPNDFTFPSAFKAAASAPPRCAAAVGPQVHALALRFGYLPDDAFVSCAALDMYFKTGR 169

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +A A  LF+     ++  WNA++   +L     + +E +  +  +G   + +++     A
Sbjct: 170 LALARRLFDEMPNRNVVAWNAVMTNAVLDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNA 229

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C  +  L  G+Q H +  K GF+ D+ VS+ ++D Y KC  M  A+ +F+ +   + V+W
Sbjct: 230 CAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVRNSVSW 289

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            +M+     NG E+ A  +Y   R +G  P +F  + L+   + L  L+ GR +HA   +
Sbjct: 290 CSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLDLGRALHAVAAR 349

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
               ++ FV  +LVDMY KCG I+DA  +F +M  RN V WNAM+ G A  G+    L +
Sbjct: 350 SCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAWNALAV 409

Query: 682 FEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDAL 740
           F++M       P+ +T + VL+ACS  GL  E YE F  M++++GIEP +EHY+ +VD L
Sbjct: 410 FDEMIMGRETAPNYITIVNVLTACSRGGLTKEGYELFQTMKQRFGIEPRIEHYACVVDLL 469

Query: 741 GRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYV 800
           GRAG  ++A E+I  MP   S S+  ALLG C++ G TE G+  AEKL  L+P DS  +V
Sbjct: 470 GRAGMEEQAYEIIQGMPMRPSISVWGALLGGCKMHGKTELGRVAAEKLFELDPQDSGNHV 529

Query: 801 LLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------------------DL 834
           LLSN+ A+A +W + T  R EMK   +KKDP                             
Sbjct: 530 LLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNIVHVFQAKDTTHEMNSEIQA 589

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
           + AK++G   +++  GY+PDT + L D+
Sbjct: 590 LLAKLKG---QMQGAGYMPDTQYALYDL 614



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 139/324 (42%), Gaps = 39/324 (12%)

Query: 31  LPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD-RF 89
           L +F+  L   L+ + F+  S+    F     A       +G   HA  L    +PD  F
Sbjct: 100 LSAFAAMLRLGLRPNDFTFPSA----FKAAASAPPRCAAAVGPQVHALALRFGYLPDDAF 155

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           ++   + MY + G L  ARRLFD+MP+R++++WN+++      G        E    +  
Sbjct: 156 VSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAVMTNAVLDGR-----PIETVEAYFG 210

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           LR +    + +++      C     +   E  HG+  K G   D  VS ++V+ Y K   
Sbjct: 211 LRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRC 270

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + +A+ +FDGM  R+ V W  M+ AYA+NG  EE F +++   R+G  P D  V  +L  
Sbjct: 271 MGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTT 330

Query: 270 IS-----DLGKR----------------HEEQVQAY--------AIKLLLYNNNSNVVLW 300
            +     DLG+                     V  Y        A ++       N+V W
Sbjct: 331 CAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTW 390

Query: 301 NKKLSGYLQVGDNHGAIECFVNMI 324
           N  + GY  +GD   A+  F  MI
Sbjct: 391 NAMIGGYAHIGDAWNALAVFDEMI 414



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 151/370 (40%), Gaps = 52/370 (14%)

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
           R G  PDD  V C     + L    +    A A +L     N NVV WN  ++  +  G 
Sbjct: 146 RFGYLPDDAFVSC-----AALDMYFKTGRLALARRLFDEMPNRNVVAWNAVMTNAVLDGR 200

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
               +E +  +  +    + V+      A AG   L+LG+Q HG   K GF   V V NS
Sbjct: 201 PIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNS 260

Query: 373 LINMYSKMGCV-------------------------------------------CGLRTD 389
           +++ Y K  C+                                            G    
Sbjct: 261 MVDFYGKCRCMGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPT 320

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
            F ++S+L   + L  GL L + +H  A ++   A+ FV++AL+D+Y + G + +AE +F
Sbjct: 321 DFMVSSLLTTCAGL-LGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVF 379

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE-ITIATAVKACGCLLML 508
                 +L TWNAMI GY    ++  AL +F  M    E     ITI   + AC    + 
Sbjct: 380 FEMPQRNLVTWNAMIGGYAHIGDAWNALAVFDEMIMGRETAPNYITIVNVLTACSRGGLT 439

Query: 509 KQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMIS 566
           K+G ++      + G E  +   + ++D+  + G    A  I   +P  P    W  ++ 
Sbjct: 440 KEGYELFQTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSISVWGALLG 499

Query: 567 GCVDNGEEDL 576
           GC  +G+ +L
Sbjct: 500 GCKMHGKTEL 509



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSI 549
           D   +A AV+A       + G+  HA A++     L   + + ++++Y K      A + 
Sbjct: 12  DPQLLAGAVEAAIASRSPRLGRAAHARALRLLAPALPPFICAHLVNLYSKLDLPGAAAAA 71

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS----- 604
               P+P  V++T  ISG   +     ALS +  M   G+ P++FTF    KA++     
Sbjct: 72  LAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPR 131

Query: 605 CLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           C  A+  G Q+HA  ++      D FV  + +DMY K G +  A  LF +M  RN V WN
Sbjct: 132 CAAAV--GPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWN 189

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           A++      G   ET++ +  ++  G  P+ V+     +AC+    +S   E FH    K
Sbjct: 190 AVMTNAVLDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLG-EQFHGFVAK 248

Query: 724 YGIEPEVEHYSFLVDALGR 742
            G + +V   + +VD  G+
Sbjct: 249 CGFDKDVSVSNSMVDFYGK 267



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 35/210 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LG++ HA    S    + F+ + L+ MY +CG +  A ++F +MP R
Sbjct: 326 SLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQR 385

Query: 118 DLISWNSILAAYAHSGEG---------------NAEN----------------VTEGFRL 146
           +L++WN+++  YAH G+                 A N                  EG+ L
Sbjct: 386 NLVTWNAMIGGYAHIGDAWNALAVFDEMIMGRETAPNYITIVNVLTACSRGGLTKEGYEL 445

Query: 147 FRSLRESITFTSRLT-LAPLLKLCLSSGY-VWASETVHGYALKIGL-VWDEFVSGALVNI 203
           F+++++      R+   A ++ L   +G    A E + G  ++  + VW   + G  ++ 
Sbjct: 446 FQTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSISVWGALLGGCKMHG 505

Query: 204 YSKFGKIREAK-FLFDGMQERDVVLWKVML 232
            ++ G++   K F  D     + VL   ML
Sbjct: 506 KTELGRVAAEKLFELDPQDSGNHVLLSNML 535


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 191/581 (32%), Positives = 300/581 (51%), Gaps = 49/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+   +  ++  L A +   E + + + I +  +      +S V TAL+ +Y + G   +
Sbjct: 56  GINPGEVGISIFLSACTDARE-ITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTD 114

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      D+  W+AM+  Y  + +  +AL LF  M   G   +++T+ + + AC  
Sbjct: 115 AASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACAS 174

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L+ G  MH      G +  + V + ++++Y KCG +  A   F  I   + VAW+ +
Sbjct: 175 LGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAI 234

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH--ANLIKL 622
            +    N     A+ + H+M L G+VP+  TF  ++ A + + AL+QGR+IH    ++  
Sbjct: 235 SAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGG 294

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              SD +V  +LV+MY+KCGN+  A  +F ++   + VLWN+++   AQHG  E+ L+LF
Sbjct: 295 GLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELF 354

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           E M+  G++P  +TF  VL ACS+ G++ +  ++F      +GI PE EH+  +VD LGR
Sbjct: 355 ERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGR 414

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG   ++ +L+L MPFE       A LGACR   + +   W AE L  L+P   + YVLL
Sbjct: 415 AGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLL 474

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADL-------IFAKV 839
           SN++A A +W DV   R  M+     K+                  DL       I A++
Sbjct: 475 SNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAEL 534

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
           + L K +KE GYVPDT+ VL DV++E KE  + YHSEKLA A+ L++TP  S I      
Sbjct: 535 QRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNL 594

Query: 894 ---------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                          L N+E +    NRFH  ++G C C D
Sbjct: 595 RVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGD 635



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 7/382 (1%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           ++  Y + G++      F+     D+ +WNA+I  YI + +  +    F  M   G    
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           E+ I+  + AC     +  G+ +    + +G E +  V + ++ MY K G   DA S+F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +   D VAW+ M++    NG    AL ++ QM L GV P++ T    + A + L  L  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G  +H  +      S   VG +LV++Y KCG IE A   F Q+  +N V W+A+    A+
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA---YENFHLMREKYGIEP 728
           +    + +++   M   G+ P+S TF+ VL AC+    + +    +E   ++    G+E 
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVL--GGGLES 298

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +V   + LV+   + G    AG++   +       +  +L+      G TE    + E+ 
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTEKALELFER- 356

Query: 789 MALEPFDSSAYVLLSNIFAAAN 810
           M LE    +     S +FA ++
Sbjct: 357 MRLEGLQPTIITFTSVLFACSH 378



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 198/508 (38%), Gaps = 97/508 (19%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           +++ YS+ G++   R+ FD+MP  D++SWN+++AAY     GN  +    +  FR +   
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYI----GN-RDFDRCWLFFRGMLLQ 55

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                 + ++  L  C  +  +    ++    L  G+  +  V  ALV++Y K G   +A
Sbjct: 56  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDA 115

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             +F  M  RDVV W  M+ AYA NG   E   LF  +   G+ P+  ++   L   + L
Sbjct: 116 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 175

Query: 274 GKRH-----EEQVQAYAIK---------LLLYNN---------------NSNVVLWNKKL 304
           G         ++V+A  I+         + LY                   NVV W+   
Sbjct: 176 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAIS 235

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT--LKSG 362
           + Y +   N  AI     M    +  +S TF+  L A A    L  G++IH  T  L  G
Sbjct: 236 AAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGG 295

Query: 363 FYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
             S V V  +L+NMYSK G +  L  D F                   K  H+       
Sbjct: 296 LESDVYVLTALVNMYSKCGNL-ALAGDMF------------------DKIAHL------- 329

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
             D  +  +LI    ++G   +A  LFE                                
Sbjct: 330 --DLVLWNSLIATNAQHGQTEKALELFER------------------------------- 356

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
           M   G +   IT  + + AC    ML QG K   ++    G   +      ++D+  + G
Sbjct: 357 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 416

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGC 568
            +VD++ +   +P  P  VAW   +  C
Sbjct: 417 WIVDSEDLLLHMPFEPHPVAWMAFLGAC 444



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 36/317 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++ +G+S    IL +    +  +   L++MY + G    A  +F +M  RD+++W++++A
Sbjct: 76  EITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVA 135

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AYA +G        E   LFR +       +++TL   L  C S G + +   +H     
Sbjct: 136 AYARNGHPR-----EALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEA 190

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G+     V  ALVN+Y K G+I  A   F  + E++VV W  +  AYA N    +   +
Sbjct: 191 QGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRV 250

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQ---------AYAIKLL--LY 291
              +   GL P+  +   VL   + +     G+R  E+ Q          Y +  L  +Y
Sbjct: 251 LHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMY 310

Query: 292 NNNSN---------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
           +   N               +VLWN  ++   Q G    A+E F  M    +Q   +TF 
Sbjct: 311 SKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFT 370

Query: 337 VALAAVAGTDNLNLGQQ 353
             L A +    L+ G++
Sbjct: 371 SVLFACSHAGMLDQGRK 387



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHAR--ILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           +S+ + S+L    + + L  G+  H R  +L      D ++   L+ MYS+CG+L  A  
Sbjct: 262 NSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGD 321

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEG-NAENVTEGFRLFRSLRESITFTSRL 160
           +FDK+   DL+ WNS++A  A  G+   A  + E  RL       ITFTS L
Sbjct: 322 MFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVL 373


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 204/615 (33%), Positives = 316/615 (51%), Gaps = 90/615 (14%)

Query: 392 TLASVLRASSSLPEGLHLS---------KQIHVHAIKNDTVADSFVSTALIDVYC---RN 439
           T  S L + S+  + LHL          +QIH   +K   + D   ++ L+  +C    +
Sbjct: 7   TPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLL-AFCASPNS 65

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
           GS+A A  +F+     +   WN MI GY  S    +AL L+ HM       +  T    +
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL------------------------- 534
           KAC  +   ++ +Q+HA+ +K GF  ++  ++ +L                         
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 535 ------DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                 D Y KCG +  A  IFN +P  + ++WT+MISGCV  G+   AL+++H+M+ +G
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           +  D       ++A + L  L+QG+ IHA + K +   DP +G  L+DMYAKCG++E+A 
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F++M+ +   +W AM+ G A HG G E L+ F  M+  GVEP+ +TF G+L+ACS+ G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           LV EA   F  M   +G +P +EHY  +VD LGRAG  KEA ELI +MP + +A++  AL
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L AC + G+ E GK + + L+ ++P     Y+ L++I AAA +W+     R +MK + V 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 829 KDPADLIFA-----------------------KVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K P   + +                        +E +++R++E GY P    +LLD+E++
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 545

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA-------- 902
           EKE A+++HSEKLA  +GLIST P   I   K                 +YA        
Sbjct: 546 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 605

Query: 903 NRFHHLRDGMCPCAD 917
            RFH  +DG C C D
Sbjct: 606 TRFHLFKDGNCTCGD 620



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 157/322 (48%), Gaps = 36/322 (11%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           + +T   +L+A SS+      ++QIH H IK    ++ + + +L++VY ++G +  A  L
Sbjct: 117 NAYTFPFLLKACSSMSASEE-TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLL 175

Query: 449 FENKDGFDLATWNAMIFGY-------------------------------ILSNNSHKAL 477
           F+  D  D  +WN+MI GY                               + +    +AL
Sbjct: 176 FDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEAL 235

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LF  M T+G +LD + + + ++AC  L +L QGK +HAY  K   E+D  +   ++DMY
Sbjct: 236 NLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMY 295

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KCG + +A  +F  +       WT MISG   +G    AL  + +M+ +GV P++ TF 
Sbjct: 296 AKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFT 355

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDC--SSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
            ++ A S    + + + +  ++ ++     S    G  +VD+  + G +++A  L + M 
Sbjct: 356 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYG-CMVDLLGRAGLLKEAEELIENMP 414

Query: 656 MR-NTVLWNAMLVGLAQHGNGE 676
           ++ N  +W A+L     HGN E
Sbjct: 415 VKPNAAIWGALLNACHIHGNLE 436



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/540 (21%), Positives = 214/540 (39%), Gaps = 112/540 (20%)

Query: 45  SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS--RCG 102
           S  SS S+++Q   +L+   +  +L   +  H ++L +  I D    + L+   +    G
Sbjct: 10  SQLSSESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSG 66

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           SL YAR +FD++   +   WN+++  Y++S E       E   L+  +       +  T 
Sbjct: 67  SLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPE-----EALLLYHHMLYHSVPHNAYTF 121

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
             LLK C S      ++ +H + +K+G   + + + +L+N+YSK G I+ A+ LFD + +
Sbjct: 122 PFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ 181

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           RD V W  M+  Y + G  E  + +F  +      P+                       
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHM------PE----------------------- 212

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
                        N++ W   +SG +  G    A+  F  M  + ++ D+V  +  L A 
Sbjct: 213 ------------RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
           A    L+ G+ IH    K       I+G  LI+MY+K G                     
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG--------------------D 300

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L E + + +++    +         V TA+I  Y  +G   E                  
Sbjct: 301 LEEAIEVFRKMEEKGVS--------VWTAMISGYAIHGRGRE------------------ 334

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKS 521
                        ALE F  M T+G   +++T    + AC    ++ + K +  +     
Sbjct: 335 -------------ALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH 381

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSI 580
           GF+  +     ++D+  + G + +A+ +  ++P  P+   W  +++ C  +G  +L   I
Sbjct: 382 GFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 22/269 (8%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIS--------TSDLLL------GK 73
           Y ++P  + +  PFL K+  SS S+S +   I  H I         T++ LL      G 
Sbjct: 111 YHSVPHNAYTF-PFLLKA-CSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGD 168

Query: 74  STHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
              AR+L +     D    N+++  Y++CG +  A  +F+ MP+R++ISW S+++    +
Sbjct: 169 IKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGA 228

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+       E   LF  ++ +      + L   L+ C   G +   + +H Y  K  +  
Sbjct: 229 GKPK-----EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEI 283

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  +   L+++Y+K G + EA  +F  M+E+ V +W  M+  YA +G G E    F+ + 
Sbjct: 284 DPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQ 343

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQV 281
            +G+ P+  +   +L   S  G  HE ++
Sbjct: 344 TAGVEPNQMTFTGILTACSHAGLVHEAKL 372


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 209/618 (33%), Positives = 298/618 (48%), Gaps = 112/618 (18%)

Query: 412 QIHVHAIKNDTVADSFVSTALID--VYCRNGS-MAEAEYLFENKDGFDLATWNAMIFGYI 468
           QIH   IK     ++FV   L+     C + + +  A  +F+     D   WN MI  Y+
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80

Query: 469 LSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
            S N  +++ LF  M H     +D  +++  ++ACG L     G+++H   +K G   DL
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140

Query: 528 CVSSGILDMYVKCGAMVDAQSI-------------------------------FNDIPAP 556
            V + +++MY K G +  A++I                               F+ +P  
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPER 200

Query: 557 DDVAWTTMISGCVDNG-------------EEDL------------------ALSIYHQMR 585
           D V+W TMI G    G             E DL                  AL ++H+M+
Sbjct: 201 DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQ 260

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
           L+ V+PD+ T   ++ A   + AL  G+ IH  + +     D  +G SLVDMYAKCG+I+
Sbjct: 261 LANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDID 320

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           ++  +F  M+ R+   W+AM++GLA HG GE  L  F  M +  ++P+ VTFIGVLSACS
Sbjct: 321 NSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACS 380

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           + GLV E +  F  M + Y + P++EHY  +VD LGRAGR +EA ELI SMPF   A + 
Sbjct: 381 HIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVW 440

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
           RALLGACR+  + E  +     L+ LEP     YVLLSNI++ A +WD V + R  MK  
Sbjct: 441 RALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNI 500

Query: 826 NVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
           N++K P                       +  I   +  +  R+K  GY P T  VL D 
Sbjct: 501 NIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDF 560

Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYA-------------------- 902
           +E+EKE AL +HSEKLA A+GL+ST P S I   K                         
Sbjct: 561 DEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIV 620

Query: 903 ---NRFHHLRDGMCPCAD 917
              NRFHH  +G C C D
Sbjct: 621 RDRNRFHHFVNGSCSCKD 638



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 10/395 (2%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           +WN  +  YL   +   ++  F  M     +  DS +  + + A     +   GQ++H  
Sbjct: 71  IWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQ 130

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHV 415
            LK G  S + V  +LI MY+K G +   R   D+     ++  +  L E + + +    
Sbjct: 131 VLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLA 190

Query: 416 HAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
           H + +       VS   +I  +   G +  A+ LF+     DL +W++MI  Y  +  S+
Sbjct: 191 HDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSN 250

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL LF  M  +    D++T+ + + ACG +  L  GK +H    ++  E+DL + + ++
Sbjct: 251 EALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLV 310

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMY KCG + ++  +FN +   D  AW+ MI G  ++G  +LAL  + +M    + P++ 
Sbjct: 311 DMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDV 370

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           TF  ++ A S +  +++G     ++ K+ D S        +VD+  + G +++A  L K 
Sbjct: 371 TFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKS 430

Query: 654 MDMR-NTVLWNAMLVGLAQHGN----GEETLKLFE 683
           M    + ++W A+L     + N     E T+ L E
Sbjct: 431 MPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLE 465



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 24/330 (7%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDK 113
            S+L++A   + ++     HA I+ +S   + F+   L+     C S   L+YAR +FD+
Sbjct: 7   MSLLQNATKLNQII---QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDE 63

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR--ESITFTSRLTLAPLLKLCLS 171
           +P  D   WN+++ AY      N++N  E   LF  +R  E I   S  +L+ +++ C  
Sbjct: 64  IPSPDTFIWNTMIRAYL-----NSQNPQESMSLFFQMRHQECIPIDS-YSLSLVIQACGR 117

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
                  + +H   LKIGL  D FV  AL+ +Y+KFG I  A+ + D M   D+V + V+
Sbjct: 118 LKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVL 177

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLY 291
           L  Y   G       LF  +    L   +  +      + D+G          A KL   
Sbjct: 178 LAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHG-HASLGDVGT---------AKKLFDR 227

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               +++ W+  ++ Y +   ++ A+  F  M  +NV  D VT +  L+A      L +G
Sbjct: 228 TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMG 287

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           + IH    ++     + +G SL++MY+K G
Sbjct: 288 KMIHECIERNRIEIDLKLGTSLVDMYAKCG 317



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 67/303 (22%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD---AQSIFNDIPAPDDVAWTTM 564
           L Q  Q+HA  +K+  + +  V + +L     C +  D   A+S+F++IP+PD   W TM
Sbjct: 16  LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTM 75

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           I   +++     ++S++ QMR    +P D ++ +++++A   L     G+++H  ++K+ 
Sbjct: 76  IRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIG 135

Query: 624 CSSDPFVGISLVDMYAKCGNIEDA---------------------YI----------LFK 652
             SD FV  +L++MYAK G+IE A                     Y+          LF 
Sbjct: 136 LGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFD 195

Query: 653 QMDMRNTVLWNAMLVGLAQHGN-------------------------------GEETLKL 681
           +M  R+ V WN M+ G A  G+                                 E L+L
Sbjct: 196 RMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRL 255

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F +M+   V PD VT + VLSAC   G +    +  H   E+  IE +++  + LVD   
Sbjct: 256 FHEMQLANVLPDKVTMVSVLSACGDVGALGMG-KMIHECIERNRIEIDLKLGTSLVDMYA 314

Query: 742 RAG 744
           + G
Sbjct: 315 KCG 317



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 7/193 (3%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P+R L   N ++  ++  G +  A++LFD+  +RDLISW+S++AAYA + + N     
Sbjct: 196 RMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSN----- 250

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E  RLF  ++ +     ++T+  +L  C   G +   + +H    +  +  D  +  +LV
Sbjct: 251 EALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLV 310

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y+K G I  +  +F+GM  RDV  W  M+   A +GFGE     F  +    + P+D 
Sbjct: 311 DMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDV 370

Query: 262 SVQCVLGVISDLG 274
           +   VL   S +G
Sbjct: 371 TFIGVLSACSHIG 383



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 131/340 (38%), Gaps = 76/340 (22%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST-SDLLLGKSTHARILNSSQIPDRFL 90
           P  S+SL  F Q  H       S   S++  A     D   G+  H ++L      D F+
Sbjct: 85  PQESMSL--FFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFV 142

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
              L+ MY++ G +  AR + D+M   DL+ +N +LA Y   GE N         LF  +
Sbjct: 143 ETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINL-----AHDLFDRM 197

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
            E    +                                  W+  + G     ++  G +
Sbjct: 198 PERDLVS----------------------------------WNTMIHG-----HASLGDV 218

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
             AK LFD   ERD++ W  M+ AYA+     E   LF ++  + + PD  ++  VL   
Sbjct: 219 GTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSAC 278

Query: 271 SD-----LGKRHEEQVQAYAIK----------------------LLLYN--NNSNVVLWN 301
            D     +GK   E ++   I+                      L ++N  NN +V  W+
Sbjct: 279 GDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWS 338

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
             + G    G    A++ F  MI  +++ + VTF+  L+A
Sbjct: 339 AMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSA 378



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 14/193 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L +GK  H  I  +    D  L  +L+ MY++CG +  + R+F+ M +R
Sbjct: 273 SVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR 332

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           D+ +W++++   A+ G G  E   + F   + + E I   + +T   +L  C   G V  
Sbjct: 333 DVFAWSAMIMGLANHGFG--ELALDHFS--KMISEDIK-PNDVTFIGVLSACSHIGLVDE 387

Query: 176 -WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML- 232
            W   T       +    + +  G +V+I  + G+++EA  L   M    D ++W+ +L 
Sbjct: 388 GWTYFTSMSKVYDVSPKIEHY--GCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLG 445

Query: 233 --RAYAENGFGEE 243
             R Y      EE
Sbjct: 446 ACRIYKNVEIAEE 458



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 103/263 (39%), Gaps = 38/263 (14%)

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED---AYILFKQMDMRNTVLWN 663
           T L Q  QIHA +IK     + FV   L+     C +  D   A  +F ++   +T +WN
Sbjct: 14  TKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWN 73

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSY---------------- 706
            M+       N +E++ LF  M+     P DS +   V+ AC                  
Sbjct: 74  TMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLK 133

Query: 707 TGLVSEAYENFHL--MREKYG-IE-----------PEVEHYSFLVDALGRAGRTKEAGEL 752
            GL S+ +    L  M  K+G IE           P++  Y+ L+    R G    A +L
Sbjct: 134 IGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDL 193

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
              MP     S +  + G   + GD  T K + ++    +    S+ +     +A A Q 
Sbjct: 194 FDRMPERDLVSWNTMIHGHASL-GDVGTAKKLFDRTCERDLISWSSMIA---AYAKARQS 249

Query: 813 DDVTSARGEMKRKNVKKDPADLI 835
           ++      EM+  NV  D   ++
Sbjct: 250 NEALRLFHEMQLANVLPDKVTMV 272


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 198/642 (30%), Positives = 314/642 (48%), Gaps = 49/642 (7%)

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y+  G   E   L     +  L  +  SV  +L + S+L +  ++     +  +     +
Sbjct: 59  YSSPGTATECRELIQQAKQEQLAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTH 118

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            + + W   ++GY+   D++ A+  F NM ++  +Q D     VAL A     N+  G+ 
Sbjct: 119 RDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGEL 178

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCV-CGLRT------------------------ 388
           +HG ++KSG  ++V V ++LI+MY K+G +  G R                         
Sbjct: 179 LHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGY 238

Query: 389 ------------------DQFTLASVLRAS--SSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                             D  T A  L+AS  SSL   LH  K IH   IK      SFV
Sbjct: 239 NMEALLYFSEMWISKVGYDSHTFAIALKASADSSL---LHHGKAIHTQTIKQGFDESSFV 295

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
              L  +Y + G       LFE     D+ +W  +I  Y+       A+E F  M  S  
Sbjct: 296 INTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNV 355

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             ++ T A  + AC  L + K G+Q+H + ++ G    L V++ I+ +Y K G +  A  
Sbjct: 356 SPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASL 415

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+ I   D ++W+T+I+     G    A      MR  G  P+EF  + ++     +  
Sbjct: 416 VFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMAL 475

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LEQG+Q+HA+++ +    +  V  +L+ MY+KCG++E+A  +F  M + N + W AM+ G
Sbjct: 476 LEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMING 535

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            A+HG  +E + LFE + + G++PD VTFIGVL+ACS+ G+V   +  F LM  +Y I P
Sbjct: 536 YAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISP 595

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
             EHY  ++D L RAGR  EA  +I SMP      +   LL +CRV GD + G+W AE+L
Sbjct: 596 SKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQL 655

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           + L+P  +  ++ L+NI+AA  +W +    R  MK K V K+
Sbjct: 656 LRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKE 697



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 168/698 (24%), Positives = 283/698 (40%), Gaps = 135/698 (19%)

Query: 81  NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENV 140
           N+  + +    N+ +    + G L  +R +FDKM  RD ISW +++A Y      NA + 
Sbjct: 83  NAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYV-----NASDS 137

Query: 141 TEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
            E   LF ++         +  ++  LK C     +   E +HG+++K GL+   FVS A
Sbjct: 138 YEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSA 197

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L+++Y K GKI +   +F  M +R+VV W  ++      G+  E    F ++  S +  D
Sbjct: 198 LIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYD 257

Query: 260 DESVQCVLGVISDL-----GKR-HEEQVQA-----------------------YAIKLLL 290
             +    L   +D      GK  H + ++                        Y ++L  
Sbjct: 258 SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFE 317

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                +VV W   ++ Y+Q G+   A+E F  M +SNV  +  TF   ++A A       
Sbjct: 318 KMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKW 377

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------------- 384
           G+QIHG  L+ G   A+ V NS++ +YSK G +                           
Sbjct: 378 GEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQ 437

Query: 385 -----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G + ++F L+SVL    S+   L   KQ+H H +      ++ 
Sbjct: 438 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMAL-LEQGKQVHAHVLCIGIDHEAM 496

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V +ALI +Y + GS+ EA  +F      ++ +W AMI GY     S +A+ LF  + + G
Sbjct: 497 VHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVG 556

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG----ILDMYVKCGAM 543
            + D +T    + AC    M+  G     Y M    E  +  S      I+D+  + G +
Sbjct: 557 LKPDYVTFIGVLTACSHAGMVDLG---FYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRL 613

Query: 544 VDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
            +A+ +   +P   DDV W+T++  C  +G+ D                           
Sbjct: 614 SEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVD--------------------------- 646

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL- 661
                   +GR     L++LD +S     I+L ++YA  G  ++A  + K M  +  +  
Sbjct: 647 --------RGRWTAEQLLRLDPNSAG-THIALANIYAAKGRWKEAAHIRKLMKSKGVIKE 697

Query: 662 --W---------NAMLVGLAQHGNGEETLKLFEDMKAH 688
             W         NA + G   H   E    + E + A+
Sbjct: 698 RGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSAN 735



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 170/371 (45%), Gaps = 47/371 (12%)

Query: 23  FTKDTYRNLPS------------FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLL 70
           F K T RN+ S            +++  L +  +   S     S  F+I   A + S LL
Sbjct: 215 FKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLL 274

Query: 71  L-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             GK+ H + +        F+ N L TMY++CG   Y  RLF+KM   D++SW +++  Y
Sbjct: 275 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTY 334

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              GE   E+  E F+    +R+S    ++ T A ++  C +       E +HG+ L++G
Sbjct: 335 VQKGE--EEHAVEAFK---RMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG 389

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
           LV    V+ ++V +YSK G ++ A  +F G+  +D++ W  ++  Y++ G+ +E F    
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLS 449

Query: 250 DLHRSGLCPDDESVQCVLGVISDL----------------GKRHEEQVQAYAIKLL---- 289
            + R G  P++ ++  VL V   +                G  HE  V +  I +     
Sbjct: 450 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCG 509

Query: 290 -------LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                  ++N    +N++ W   ++GY + G +  AI  F  +    ++ D VTF+  L 
Sbjct: 510 SVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLT 569

Query: 341 AVAGTDNLNLG 351
           A +    ++LG
Sbjct: 570 ACSHAGMVDLG 580


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 244/822 (29%), Positives = 385/822 (46%), Gaps = 93/822 (11%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFD 218
            L P +K   +     ++  +H  AL+ GL+      V+ AL+  Y++ G++  A  +F 
Sbjct: 59  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118

Query: 219 GMQE--RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--- 273
            + +   D V +  ++ A       +        +   G      ++  VL  +S L   
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 274 --GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
               R   +  A+A+K  L + +     +N  LS Y ++G    A   F           
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFA-FNALLSMYARLGLVADAQRLFAG--------- 228

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
                    A  G  ++     +    ++SG +   +   +L +M +      G+R D  
Sbjct: 229 ---------ATPGRGDVVTWNTMVSVLVQSGMFDEAV--QTLYDMVA-----LGVRPDGV 272

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFE 450
           T AS L A S L E L + +++H + IK+D +A +SFV++AL+D+Y  +  + +A  +F+
Sbjct: 273 TFASALPACSRL-ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 331

Query: 451 --NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLM 507
                G  L  WNAMI GY  +    +AL LF+ M   +G    E T+A+ + AC     
Sbjct: 332 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 391

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
               + +H Y +K G   +  V + ++DMY + G    A+ IF  +  PD V+W T+I+G
Sbjct: 392 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451

Query: 568 CVDNGEEDLALSIYHQMRL---SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           CV  G    A  +  +M+     GVVP+  T   L+   + L A  +G++IH   ++   
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            +D  VG +LVDMYAKCG +  +  +F ++  RNT+ WN +++    HG G E   LF+ 
Sbjct: 512 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 685 MKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           M A G   P+ VTF+  L+ACS++G+V    + FH M   +G+EP  +  + +VD LGRA
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 631

Query: 744 GRTKEAGELILSMPF-EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           GR  EA  ++ SM   E   S    +LGACR+  +   G+   E+L+ LEP ++S YVLL
Sbjct: 632 GRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 691

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------- 849
            NI++AA QW      R  M+R+ V K+P    + +V+G I R   G             
Sbjct: 692 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPG-CSWIEVDGAIHRFMAGESAHPASEEVHAH 750

Query: 850 -----------GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
                      GY PDT  VL D+++ +K   L  HSEKLA A+GL+   P + I   K 
Sbjct: 751 MEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKN 810

Query: 899 PLYAN-----------------------RFHHLRDGMCPCAD 917
               N                       RFHH R+G C C D
Sbjct: 811 LRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGD 852



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 247/605 (40%), Gaps = 103/605 (17%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           ++ A +  D    ++ HA  L    +  P   + N L+T Y+RCG L  A  +F  + D 
Sbjct: 64  IKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDS 123

Query: 117 -RDLISWNSILAA------YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
             D +S+NS+++A      + H+       +  G  L        +FT    L  +  L 
Sbjct: 124 AHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPL-------TSFTLVSVLRAVSHLP 176

Query: 170 LSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDV 225
            ++  V      H +ALK GL+     F   AL+++Y++ G + +A+ LF G      DV
Sbjct: 177 AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDV 236

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR---- 276
           V W  M+    ++G  +E      D+   G+ PD  +    L   S     D+G+     
Sbjct: 237 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 296

Query: 277 -----------------------HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
                                  HE+  +A  +  ++ ++   + +WN  + GY Q G +
Sbjct: 297 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 356

Query: 314 HGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             A+  F  M   +       T    L A A ++     + +HG  +K G      V N+
Sbjct: 357 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNA 416

Query: 373 LINMYSKM--------------------------GCVC-GLRTDQFTLA---SVLRASSS 402
           L++MY+++                          GCV  G   D F LA     L     
Sbjct: 417 LMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 476

Query: 403 LPEGLHL---------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           +P  + L                K+IH +A+++    D  V +AL+D+Y + G +A +  
Sbjct: 477 VPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRA 536

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLL 506
           +F+     +  TWN +I  Y +     +A  LF  M  SGE R +E+T   A+ AC    
Sbjct: 537 VFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 596

Query: 507 MLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTT 563
           M+ +G Q+ HA     G E    + + ++D+  + G + +A ++   +   +    AW+T
Sbjct: 597 MVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWST 656

Query: 564 MISGC 568
           M+  C
Sbjct: 657 MLGAC 661



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 208/456 (45%), Gaps = 40/456 (8%)

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           +G ++A +   S I M S        + D   L   ++++++L +    ++ IH  A++ 
Sbjct: 33  AGNHAAALRALSSITMASPQ-----QQLDHSALPPAIKSAAALRDA-RSARAIHAAALRR 86

Query: 421 DTV--ADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKA 476
             +      V+ AL+  Y R G +A A  +F +      D  ++N++I    L      A
Sbjct: 87  GLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHA 146

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCL----LMLKQGKQMHAYAMKSGF--ELDLCVS 530
           L     M   G  L   T+ + ++A   L      ++ G++ HA+A+K+G          
Sbjct: 147 LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF 206

Query: 531 SGILDMYVKCGAMVDAQSIF-NDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + +L MY + G + DAQ +F    P   DV  W TM+S  V +G  D A+   + M   G
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDA 647
           V PD  TFA  + A S L  L+ GR++HA +IK D  +++ FV  +LVDMYA    +  A
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326

Query: 648 YILF-------KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIG 699
             +F       KQ+ M     WNAM+ G AQ G  EE L+LF  M+A  G  P   T   
Sbjct: 327 RQVFDMVPDSGKQLGM-----WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMAS 381

Query: 700 VLSACSYTGLVSEAY---ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           VL AC+     SEA+   E  H    K G+       + L+D   R G+T  A  +   +
Sbjct: 382 VLPACAR----SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 437

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
                 S +  L+  C VQG       +A ++  LE
Sbjct: 438 DLPDVVSWN-TLITGCVVQGHVADAFQLAREMQQLE 472


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  322 bits (825), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 196/613 (31%), Positives = 310/613 (50%), Gaps = 56/613 (9%)

Query: 269 VISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           +IS   K  E ++   A K+    +  + V WN  ++G++ +G+   A+E   +M R   
Sbjct: 40  IISGYAKCGEIRI---ASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGF 96

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
             D  +F   L  VA    + +GQQ+H   +K G+   V  G++L++MY+K    C    
Sbjct: 97  AVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAK----CERVE 152

Query: 389 DQFTLASVLRASSSLP--------------------------EGLH-------------- 408
           D F +   +   +S+                           EG+               
Sbjct: 153 DAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLD 212

Query: 409 ------LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK-DGFDLATWN 461
                 L+ Q+H   +K+   +D+ V  A+I  Y   GS+ +AE +F+   +  DL TWN
Sbjct: 213 DPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWN 272

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           +M+  Y+++N   +A +LF  M   G   D  T  + + A        QGK +H   +K 
Sbjct: 273 SMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKR 332

Query: 522 GFELDLCVSSGILDMYVKC--GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           G E  + +S+ ++ MY+K    +M +A +IF  +   D V+W ++++G   +G  + AL 
Sbjct: 333 GLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALK 392

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
            +  MR   VV D + F+ ++++ S L  L+ G+Q+H  ++K     + FV  SL+ MY+
Sbjct: 393 FFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYS 452

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCG IEDA   F      +++ WN+++ G AQHG G+  L LF  MK   V+ D +TF+ 
Sbjct: 453 KCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVA 512

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           VL+ACS+ GLV E +     M   YGI P +EHY+ ++D LGRAGR  EA  LI +MPFE
Sbjct: 513 VLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFE 572

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
             A + + LLGACR  GD E    VA  L+ LEP +   YVLLS++F    +W++  S +
Sbjct: 573 PDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIK 632

Query: 820 GEMKRKNVKKDPA 832
             MK + VKK P 
Sbjct: 633 RLMKERGVKKVPG 645



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 159/315 (50%), Gaps = 2/315 (0%)

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
           H  AIK+ T A  + +  +I  Y + G +  A  +F      D  +WN MI G++   N 
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             ALE    M   G  +D  +  + +K   C+  ++ G+Q+H+  +K G+E ++   S +
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           LDMY KC  + DA  +F  I   + V W  +ISG    G+   A  +   M L GV  D+
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK- 652
            TFA L+         +   Q+HA ++K   +SD  V  +++  Y++CG+IEDA  +F  
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
            ++ R+ V WN+ML     +   EE  +LF +M+  G EPD  T+  V+SA ++ G    
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISA-AFEGSHQG 320

Query: 713 AYENFHLMREKYGIE 727
             ++ H +  K G+E
Sbjct: 321 QGKSLHGLVIKRGLE 335



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 136/606 (22%), Positives = 246/606 (40%), Gaps = 106/606 (17%)

Query: 62  HAISTSD---LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           H++S S    L      H   + S      +  NN+++ Y++CG +  A ++F +   RD
Sbjct: 5   HSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRD 64

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
            +SWN+++A + + G     N        +S++         +   +LK     GYV   
Sbjct: 65  AVSWNTMIAGFVNLG-----NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG 119

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + VH   +K+G   + F   AL+++Y+K  ++ +A  +F  +  R+ V W  ++  YA+ 
Sbjct: 120 QQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV 179

Query: 239 GFGEEVFHLF-----------------------------------VDLHRSGLCPDDESV 263
           G     F L                                      + + GL  D    
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239

Query: 264 QCVLGVISDLGKRHE-EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
             ++   S+ G   + E+V   AI+        ++V WN  L+ YL       A + F+ 
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIE------TRDLVTWNSMLAAYLVNNQEEEAFQLFLE 293

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--- 379
           M     + D  T+   ++A     +   G+ +HG  +K G    V + NSLI MY K   
Sbjct: 294 MQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHS 353

Query: 380 -------------------------------------MGCVCGLRT-----DQFTLASVL 397
                                                +     +R+     D +  ++VL
Sbjct: 354 KSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVL 413

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
           R+ S L   L L +Q+HV  +K+    + FV+++LI +Y + G + +A   F+       
Sbjct: 414 RSCSDLAT-LQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSS 472

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQ 513
             WN++IFGY        AL+LF  M     +LD IT    + AC  + ++++G    K 
Sbjct: 473 IAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKS 532

Query: 514 MHA-YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDN 571
           M + Y +    E   C    ++D+  + G + +A+++   +P  PD + W T++  C   
Sbjct: 533 MESDYGIPPRMEHYAC----MIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTC 588

Query: 572 GEEDLA 577
           G+ +LA
Sbjct: 589 GDIELA 594



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 168/389 (43%), Gaps = 39/389 (10%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           + NL +F  +L        +  +     + SIL+       + +G+  H+ ++      +
Sbjct: 75  FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGN 134

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            F  + L+ MY++C  +  A  +F  +  R+ ++WN++++ YA  G+         F L 
Sbjct: 135 VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGT-----AFWLL 189

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             +          T APLL L         +  VH   +K GL  D  V  A++  YS+ 
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC 249

Query: 208 GKIREAKFLFDG-MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           G I +A+ +FDG ++ RD+V W  ML AY  N   EE F LF+++   G  PD  +   V
Sbjct: 250 GSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSV 309

Query: 267 L----------------GVISDLG----------------KRHEEQVQAYAIKLLLYNNN 294
           +                G++   G                K H + +   A+ +     N
Sbjct: 310 ISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDE-ALNIFESLEN 368

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            + V WN  L+G+ Q G +  A++ F NM    V  D   F   L + +    L LGQQ+
Sbjct: 369 KDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQV 428

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           H   LKSGF     V +SLI MYSK G +
Sbjct: 429 HVLVLKSGFEPNGFVASSLIFMYSKCGVI 457



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 2/183 (1%)

Query: 602 ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
           + S  TAL +    H   IK   ++  +   +++  YAKCG I  A  +F +   R+ V 
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVS 67

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           WN M+ G    GN E  L+  + MK +G   D  +F  +L   +  G V E  +  H M 
Sbjct: 68  WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYV-EVGQQVHSMM 126

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETG 781
            K G E  V   S L+D   +  R ++A E+  S+    S + +  + G  +V GD  T 
Sbjct: 127 VKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV-GDRGTA 185

Query: 782 KWV 784
            W+
Sbjct: 186 FWL 188



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 13/226 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQ---IPDRFLTNNLMTMY--SRCGSLVYARRLFD 112
           S++  A   S    GKS H  ++       +P   ++N+L+ MY  S   S+  A  +F+
Sbjct: 308 SVISAAFEGSHQGQGKSLHGLVIKRGLEFLVP---ISNSLIAMYLKSHSKSMDEALNIFE 364

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            + ++D +SWNSIL  ++ SG        +  + F ++R           + +L+ C   
Sbjct: 365 SLENKDHVSWNSILTGFSQSGLSE-----DALKFFENMRSQYVVIDHYAFSAVLRSCSDL 419

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   + VH   LK G   + FV+ +L+ +YSK G I +A+  FD   +   + W  ++
Sbjct: 420 ATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLI 479

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
             YA++G G+    LF  +    +  D  +   VL   S +G   E
Sbjct: 480 FGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEE 525



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 11/181 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++LR     + L LG+  H  +L S   P+ F+ ++L+ MYS+CG +  AR+ FD  P  
Sbjct: 411 AVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKD 470

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR---ESITFTSRLTLAPLLKLCLSSGY 174
             I+WNS++  YA  G G      + F L +  R   + ITF + LT    + L +  G+
Sbjct: 471 SSIAWNSLIFGYAQHGRGKI--ALDLFFLMKDRRVKLDHITFVAVLTACSHIGL-VEEGW 527

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLR 233
            +       Y +   +  + +    ++++  + G++ EAK L + M  E D ++WK +L 
Sbjct: 528 SFLKSMESDYGIPPRM--EHY--ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLG 583

Query: 234 A 234
           A
Sbjct: 584 A 584


>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
 gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
          Length = 830

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 218/810 (26%), Positives = 370/810 (45%), Gaps = 82/810 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  HA+I++     +  L N ++ MY  C S+  AR++FDKM  RD   W  ++AAYA 
Sbjct: 27  GKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMASRDAGLWAPMMAAYAR 86

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     ++ E   LF  + +      R+TL  ++  C  SG +     VH         
Sbjct: 87  VG-----HLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRRVHRRIQGSDFE 141

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDG-MQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           W   V  ALV +Y+K G + EA+ +FD  +  +++V W  M+ AY E G  E+   LF++
Sbjct: 142 WSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIE 201

Query: 251 LHRSGLCPDDESVQCVLGVIS-DLGKRHEEQVQAYA-----------IKL---------- 288
           + + G+ P++ +   VL     D G++    ++              IK+          
Sbjct: 202 MLQEGVAPNEITYVSVLNACDLDAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDA 261

Query: 289 -LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
            L+++   + N+++WN  ++GY  + +  G +E F  M+    + D  T L  L A A +
Sbjct: 262 SLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKS 321

Query: 346 DNLNLG--QQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------------------C 382
             L     Q IH   ++SG  S  +VG +L+ + S+ G                     C
Sbjct: 322 STLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNC 381

Query: 383 VCG----------------------LRTDQFTLASVLRASSSLPE--GLHLSKQIHVHAI 418
           +                        +R D+ T  S+L A ++     GL   K+ H   +
Sbjct: 382 MFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEIL 441

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           +     D+ + TAL+ +Y   G + +A+ +FE  +  DL +W  M+  Y  +    +A  
Sbjct: 442 EQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASI 501

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            F  +   G   D + +  A+ AC     L   +  H    + G+E D  V++ +L++Y 
Sbjct: 502 TFRRIQLEGHTPDRVALIAALGAC---TNLSSARDFHERIRQLGWEKDPLVANALLEVYS 558

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
            CG++ DA   F+ I  P  ++W  +I+     G  D A  +   M L G  PD  T A 
Sbjct: 559 ACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLAT 618

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR- 657
           ++ + + L    +G+ IH ++++     D  V  +LV+ Y KCG+   A  +F+ +    
Sbjct: 619 VINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAAD 678

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N V WN+ L   AQ G+  E L +  +M   GV P +VTF+ VLS C + G+       F
Sbjct: 679 NVVTWNSTLAAYAQSGHASEALHVLAEMVQQGVAPTAVTFVSVLSVCGHAGVADVGCHLF 738

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
             +R  Y ++P  EHY  ++D L R G  +EA +L+ +MP    +    ALL  C     
Sbjct: 739 SSLRWDYDMDPIPEHYGCMIDLLARGGWLEEARQLLKTMPTTPDSIKWMALLSGCHGASV 798

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
            +TG ++A +L+      SSA++ +SN+++
Sbjct: 799 DKTGVFMAMQLLQQNTQSSSAHIAISNLYS 828



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 241/529 (45%), Gaps = 69/529 (13%)

Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
           M  V  + T    LA+ LRA  +LP+G    K++H   + +    +  ++  ++ +Y   
Sbjct: 1   MLAVLTISTTVTDLAASLRACHTLPKG----KELHAQIVSDGLDKNLHLANGIVHMYLVC 56

Query: 440 GSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
            S+  A  +F+     D   W  M+  Y    +  +A  LF  M   G   D +T+ T +
Sbjct: 57  KSVDNARKVFDKMASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVI 116

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF-NDIPAPDD 558
            AC     L +G+++H     S FE  + V + ++ MY KCG++ +A+ +F N +   + 
Sbjct: 117 NACSESGSLAEGRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNI 176

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WTTM+S  V+ G  + AL+++ +M   GV P+E T+  ++ A      L+ GR++H  
Sbjct: 177 VSWTTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNACD----LDAGRKVHRL 232

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           + +    SD FVG +L+ MY +CG++EDA ++F  +  RN ++WN+M+ G A     + T
Sbjct: 233 IEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGT 292

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTG-LVSEAYENFHLMREKYGIE---------- 727
           L+ F  M   G + D  T + VL AC+ +  L + + +  H +  + G++          
Sbjct: 293 LEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALV 352

Query: 728 ---------------------PEVEHYSFLVDALGRAGRTKEAGELILSMPFE---ASAS 763
                                 ++  ++ +  A  + GR ++A EL   M  +       
Sbjct: 353 KIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKV 412

Query: 764 MHRALLGACRVQGDT---ETGKWVAEKLMALE-PFDSSAYVLLSNIFAAANQWDDVTSAR 819
              ++L AC   G +   ETGK   E+++      D+     L  ++AA  + DD     
Sbjct: 413 TFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVF 472

Query: 820 GEMKRKNVKK--------------DPADLIFAKVEGLIKRIKEGGYVPD 854
            +M+ +++                D A + F       +RI+  G+ PD
Sbjct: 473 EKMESRDLISWTTMLGAYTQARLLDEASITF-------RRIQLEGHTPD 514



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/586 (24%), Positives = 240/586 (40%), Gaps = 91/586 (15%)

Query: 64  ISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           ++  DL  G+  H  I  S    D F+ N L+ MY RCGSL  A  +FD + DR+L+ WN
Sbjct: 218 LNACDLDAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWN 277

Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS--ETV 181
           S++A YA   E            FR +        + TL  +L  C  S  + AS  +T+
Sbjct: 278 SMIAGYASLNEAQGT-----LEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTI 332

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H  A++ GL  D  V  ALV I S+ G  + AK +FD ++ +D+  W  M  AYA++G  
Sbjct: 333 HDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRL 392

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG---------KRHEEQV-QAYAIKLLLY 291
            +   L   +    + PD  +   +L   +  G         K HEE + Q Y +  +L 
Sbjct: 393 RDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLG 452

Query: 292 N----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                                   + +++ W   L  Y Q      A   F  +      
Sbjct: 453 TALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHT 512

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC------- 382
            D V  + AL A     NL+  +  H    + G+    +V N+L+ +YS  G        
Sbjct: 513 PDRVALIAALGACT---NLSSARDFHERIRQLGWEKDPLVANALLEVYSACGSLEDANET 569

Query: 383 ------------------------------------VCGLRTDQFTLASVLRASSSLPEG 406
                                               + G   D  TLA+V+ + +SL + 
Sbjct: 570 FDGIGEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRASL-QL 628

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD-LATWNAMIF 465
               K IH   ++     DS V+TAL++ Y + G  A A  +F+     D + TWN+ + 
Sbjct: 629 FRKGKIIHDSILEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLA 688

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
            Y  S ++ +AL + + M   G     +T  + +  CG   +   G  + + +++  +++
Sbjct: 689 AYAQSGHASEALHVLAEMVQQGVAPTAVTFVSVLSVCGHAGVADVGCHLFS-SLRWDYDM 747

Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           D        ++D+  + G + +A+ +   +P  PD + W  ++SGC
Sbjct: 748 DPIPEHYGCMIDLLARGGWLEEARQLLKTMPTTPDSIKWMALLSGC 793


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 191/543 (35%), Positives = 285/543 (52%), Gaps = 78/543 (14%)

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
           D  ++ +WN++I     S +S +AL  FS M     + +  T   A+K+C  LL L  G+
Sbjct: 37  DKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGR 96

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN- 571
           Q H  A+  GFE DL VSS ++DMY KCG + DA+++F++I   + V+WT+MI+G V N 
Sbjct: 97  QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 156

Query: 572 ------------GEEDL------------------ALSIYHQMRLSGVVP-DEFTFAILV 600
                        E D+                  ++ I+H+M   G +  +  T + ++
Sbjct: 157 DAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 216

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A +   +   G+ IH  +IK+   S+ FVG S++DMY KCG +E A   F +M  +N  
Sbjct: 217 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 276

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W+AM+ G   HG+ +E L++F +M   GV+P+ +TF+ VL+ACS+ GL+ E +  F  M
Sbjct: 277 SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 336

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
             ++ +EP VEHY  +VD LGRAG  KEA +LI  M       +  ALLGACR+  + + 
Sbjct: 337 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 396

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
           G+  A KL  L+P +   YVLLSNI+A A +W+DV   R  MK   + K P         
Sbjct: 397 GEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKG 456

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                          + I+  +E L  +++E GYVPD   VL DV  EEKE  L  HSEK
Sbjct: 457 RVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEK 516

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCP 914
           LA A+G+++T P + I                     + ++E +   + RFHH RDG+C 
Sbjct: 517 LAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCS 576

Query: 915 CAD 917
           C D
Sbjct: 577 CGD 579



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 216/461 (46%), Gaps = 47/461 (10%)

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
           Y + +NV  WN  ++   + GD+  A+  F +M + +++ +  TF  A+ + +   +L+ 
Sbjct: 35  YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHS 94

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
           G+Q H   L  GF   + V ++L++MYSK    CG   D  TL                 
Sbjct: 95  GRQAHQQALIFGFEPDLFVSSALVDMYSK----CGELRDARTLF---------------- 134

Query: 411 KQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
                    ++    + VS T++I  Y +N     A  +F+     D+ +WN++I  Y  
Sbjct: 135 ---------DEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQ 185

Query: 470 SNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           +  S +++E+F  M   GE   + +T++  + AC      + GK +H   +K G E ++ 
Sbjct: 186 NGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVF 245

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           V + I+DMY KCG +  A+  F+ +   +  +W+ M++G   +G    AL ++++M ++G
Sbjct: 246 VGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG 305

Query: 589 VVPDEFTFAILVKASSCLTALEQG-RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           V P+  TF  ++ A S    LE+G     A   + D          +VD+  + G +++A
Sbjct: 306 VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEA 365

Query: 648 YILFKQMDMR-NTVLWNAMLVGLAQHGN---GE-ETLKLFEDMKAHGVEPDSVTFIGVLS 702
           + L K M +R + V+W A+L     H N   GE    KLFE      ++P +  +  +LS
Sbjct: 366 FDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE------LDPKNCGYYVLLS 419

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF-LVDALGR 742
                    E  E   ++ +  G+   V+   F LVD  GR
Sbjct: 420 NIYADAGRWEDVERMRILMKNSGL---VKPPGFSLVDIKGR 457



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 135/290 (46%), Gaps = 57/290 (19%)

Query: 105 VYARR---------LFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           +Y RR         LF+K  D+ ++ SWNS++A  A SG+       E  R F S+R+  
Sbjct: 17  IYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDS-----VEALRAFSSMRKLS 71

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +R T    +K C +   + +    H  AL  G   D FVS ALV++YSK G++R+A+
Sbjct: 72  LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 131

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LFD +  R++V W  M+  Y +N           D HR+            L V   + 
Sbjct: 132 TLFDEISHRNIVSWTSMITGYVQND----------DAHRA------------LRVFDGMA 169

Query: 275 KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSV 333
           +R                   +V+ WN  ++ Y Q G +  ++E F  M++   + Y++V
Sbjct: 170 ER-------------------DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           T    L A A + +  LG+ IH   +K G  S V VG S+I+MY K G V
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKV 260



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 37/239 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR------------------- 108
           DL  G+  H + L     PD F+++ L+ MYS+CG L  AR                   
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 109 ------------RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESIT 155
                       R+FD M +RD+ISWNSI+A YA +G       TE   +F R +++   
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMS-----TESMEIFHRMVKDGEI 205

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
             + +TL+ +L  C  SG     + +H   +K+GL  + FV  +++++Y K GK+  A+ 
Sbjct: 206 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 265

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            FD M+E++V  W  M+  Y  +G  +E   +F +++ +G+ P+  +   VL   S  G
Sbjct: 266 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 169/393 (43%), Gaps = 77/393 (19%)

Query: 224 DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHE 278
           +V  W  ++   A +G   E    F  + +  L P+  +  C +   S L     G++  
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 279 EQVQAYAIKLLLYNNNS------------------------NVVLWNKKLSGYLQVGDNH 314
           +Q   +  +  L+ +++                        N+V W   ++GY+Q  D H
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159

Query: 315 GAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSG--FYSAVIVGN 371
            A+  F  M  R  + ++S+   +A+ A  G    ++  +I    +K G   Y+AV    
Sbjct: 160 RALRVFDGMAERDVISWNSI---IAVYAQNGMSTESM--EIFHRMVKDGEINYNAV---- 210

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                               TL++VL A +       L K IH   IK    ++ FV T+
Sbjct: 211 --------------------TLSAVLLACAH-SGSQRLGKCIHDQVIKMGLESNVFVGTS 249

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           +ID+YC+ G +  A   F+     ++ +W+AM+ GY +  ++ +ALE+F  M+ +G + +
Sbjct: 250 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 309

Query: 492 EITIATAVKACGCLLMLKQG----KQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
            IT  + + AC    +L++G    K M H + ++ G E   C    ++D+  + G + +A
Sbjct: 310 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC----MVDLLGRAGYLKEA 365

Query: 547 QSIFNDIP-APDDVAWTTMISGC-----VDNGE 573
             +   +   PD V W  ++  C     VD GE
Sbjct: 366 FDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 398



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 85/170 (50%), Gaps = 15/170 (8%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H +++      + F+  +++ MY +CG +  AR+ FD+M ++++ SW++++A Y 
Sbjct: 227 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 286

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYA 185
             G        E   +F  +  +    + +T   +L  C     L  G+ W     H + 
Sbjct: 287 MHGHAK-----EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 341

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA 234
           ++ G+  + +  G +V++  + G ++EA  L  GM+ R D V+W  +L A
Sbjct: 342 VEPGV--EHY--GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 188/584 (32%), Positives = 293/584 (50%), Gaps = 77/584 (13%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQ+H H +K ++   S   + +  V   N S + A+ +F+  D  ++  WN  +  +   
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           ++   A+ LF  +       D  T +  +KAC  LL ++ GK +H Y  K G + ++ + 
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDV------------------------------- 559
           + I+ +Y  CG +  A+ +F+ +P  D +                               
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT+MI G    G+   A+ ++ +M  +G++P+E T   ++ A + +  L  GR+IH   
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            +     +  V  +L+DMY KCG +EDA  +F  M+ R  V W+AM+ GLA HG  E+ L
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF  M   GV+P++VTFIG+L ACS+ G+V +  + F  M   YGI P +EHY  +VD 
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDL 391

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
             RAG  +EA E I++MP   +  +  ALLG C+V  + +  +     L  L+P +   Y
Sbjct: 392 FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYY 451

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIF 836
           V+LSNI+A A +W+DV   R  M+ + VKK P                        + IF
Sbjct: 452 VVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIF 511

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--- 893
              E L++R+K  GYVP+T  VLLD+EE++KE+ LY HSEKLA  +GLI T P +VI   
Sbjct: 512 QTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIM 571

Query: 894 ------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                             +S +E +    NRFH  ++G C C D
Sbjct: 572 KNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGD 615



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 146/644 (22%), Positives = 256/644 (39%), Gaps = 167/644 (25%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA +L ++        + + ++ +   S  YA+ +F  +   ++  WN+ L ++A  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA-- 89

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
            EG++    +   LF  LRE        T + +LK C     V   + VHGY  K+GL  
Sbjct: 90  -EGDSP--ADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQS 146

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           + F+   +V++Y+  G+I  A+ +FD M +RDV+ W +M+    + G  E  + LF ++ 
Sbjct: 147 NMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEM- 205

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                P+                                    NV  W   + GY Q G 
Sbjct: 206 -----PE-----------------------------------RNVRSWTSMIGGYAQCGK 225

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
           +  AI+ F+ M  + +  + VT +  L A A   NL LG++IH  + +SG+   + V N+
Sbjct: 226 SKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNT 285

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           LI+MY K GC          L    R   ++ E   +S                   +A+
Sbjct: 286 LIDMYVKCGC----------LEDACRIFDNMEERTVVS------------------WSAM 317

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I     +G   +A           LA +N MI                     +G + + 
Sbjct: 318 IAGLAAHGRAEDA-----------LALFNKMI--------------------NTGVKPNA 346

Query: 493 ITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           +T    + AC  + M+++G++  A     Y +    E   C    ++D++ + G + +A 
Sbjct: 347 VTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC----MVDLFSRAGLLQEAH 402

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
               ++P AP+ V W  ++ GC           ++  ++L                    
Sbjct: 403 EFIMNMPIAPNGVVWGALLGGC----------KVHKNIKL-------------------- 432

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM---DMRNTVLWN 663
            A E  R    +L KLD  +D +  + L ++YA+ G  ED   + K M    ++ T  W+
Sbjct: 433 -AEEATR----HLSKLDPLNDGYY-VVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWS 486

Query: 664 AMLV---------GLAQHGNGEETL----KLFEDMKAHGVEPDS 694
           +++V         G   H   EE      KL + MK  G  P++
Sbjct: 487 SIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNT 530



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 28/269 (10%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P+ ++SL  F +   F  S        +L+      D+  GK  H  +       + FL 
Sbjct: 94  PADAISL--FYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA----------AYAHSGEGNAENV- 140
           N ++ +Y+ CG +  AR++FDKMP RD+I+WN ++A          AY    E    NV 
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 141 ---------------TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
                           E   LF  + ++    + +T+  +L  C   G +     +H ++
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            + G   +  V   L+++Y K G + +A  +FD M+ER VV W  M+   A +G  E+  
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LF  +  +G+ P+  +   +L   S +G
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMG 360


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 195/616 (31%), Positives = 312/616 (50%), Gaps = 84/616 (13%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G R DQF+   +L+A S +   L    ++H  A K  T+ D FV T  +D+Y   G +  
Sbjct: 106 GGRLDQFSFLPILKAVSKV-SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 164

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+     D+ TWN MI  Y       +A +LF  M  S    DE+ +   V ACG 
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224

Query: 505 LLMLKQGKQMHAYAMKSGFELD-------------------------------LCVSSGI 533
              ++  + ++ + +++   +D                               L VS+ +
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
           +  Y KCG + DAQ IF+     D V WTTMIS  V++     AL ++ +M  SG+ PD 
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            +   ++ A + L  L++ + +H+ +      S+  +  +L++MYAKCG ++    +F++
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  RN V W++M+  L+ HG   + L LF  MK   VEP+ VTF+GVL  CS++GLV E 
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            + F  M ++Y I P++EHY  +VD  GRA   +EA E+I SMP  ++  +  +L+ ACR
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524

Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
           + G+ E GK+ A++++ LEP    A VL+SNI+A   +W+DV + R  M+ KNV K+   
Sbjct: 525 IHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGL 584

Query: 832 ---------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
                                ++ I+AK++ ++ ++K  GYVPD   VL+DVEEEEK+  
Sbjct: 585 SRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDL 644

Query: 871 LYYHSEKLARAYGLISTPPSS--------VILSN-------------------KEPLYAN 903
           + +HSEKLA  +GL++              I+ N                   +E +  +
Sbjct: 645 VLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRD 704

Query: 904 --RFHHLRDGMCPCAD 917
             RFH  ++G+C C D
Sbjct: 705 RTRFHCYKNGLCSCRD 720



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 32/319 (10%)

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           S+     +  +  +   G RLD+ +    +KA   +  L +G ++H  A K     D  V
Sbjct: 89  SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV 148

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            +G +DMY  CG +  A+++F+++   D V W TMI      G  D A  ++ +M+ S V
Sbjct: 149 ETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV 208

Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP--------------------- 628
           +PDE     +V A      +   R I+  LI+ D   D                      
Sbjct: 209 MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE 268

Query: 629 ----------FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
                     FV  ++V  Y+KCG ++DA ++F Q + ++ V W  M+    +    +E 
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L++FE+M   G++PD V+   V+SAC+  G++ +A +  H      G+E E+   + L++
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALIN 387

Query: 739 ALGRAGRTKEAGELILSMP 757
              + G      ++   MP
Sbjct: 388 MYAKCGGLDATRDVFEKMP 406



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/456 (21%), Positives = 195/456 (42%), Gaps = 79/456 (17%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           ++F+ F +D  R+    + ++L + +  H         +  IL+     S L  G   H 
Sbjct: 77  IVFNPFLRDLSRSSEPRA-TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
                + + D F+    M MY+ CG + YAR +FD+M  RD+++WN+++  Y   G    
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL--- 192

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE--- 194
             V E F+LF  +++S      + L  ++  C  +G +  +  ++ + ++  +  D    
Sbjct: 193 --VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250

Query: 195 ----------------------------FVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
                                       FVS A+V+ YSK G++ +A+ +FD  +++D+V
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-----KRHEEQV 281
            W  M+ AY E+ + +E   +F ++  SG+ PD  S+  V+   ++LG     K     +
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370

Query: 282 QAYAIKLLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAI 317
               ++  L  NN+                        NVV W+  ++     G+   A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  M + NV+ + VTF+  L   + +  +  G++I         ++++    ++    
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI---------FASMTDEYNITPKL 481

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
              GC+     D F  A++LR +  + E + ++  +
Sbjct: 482 EHYGCM----VDLFGRANLLREALEVIESMPVASNV 513



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 222/507 (43%), Gaps = 43/507 (8%)

Query: 106 YARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
           YA  +F  +P   + I +N  L   + S E  A         ++ +R       + +  P
Sbjct: 62  YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRA-----TILFYQRIRHVGGRLDQFSFLP 116

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +LK       ++    +HG A KI  + D FV    +++Y+  G+I  A+ +FD M  RD
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
           VV W  M+  Y   G  +E F LF ++  S + P DE + C   ++S  G+    +    
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-DEMILC--NIVSACGRTGNMRYNRA 233

Query: 285 AIKLLLYNN-NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             + L+ N+   +  L    ++ Y   G    A E F  M   N+        V+ A V+
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL-------FVSTAMVS 286

Query: 344 G---TDNLNLGQQIHGTTLK------SGFYSAVIVGN---SLINMYSKMGCVCGLRTDQF 391
           G      L+  Q I   T K      +   SA +  +     + ++ +M C  G++ D  
Sbjct: 287 GYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVV 345

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           ++ SV+ A ++L   L  +K +H     N   ++  ++ ALI++Y + G +     +FE 
Sbjct: 346 SMFSVISACANLG-ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               ++ +W++MI    +   +  AL LF+ M       +E+T    +  C    ++++G
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464

Query: 512 KQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
           K++ A     Y +    E   C    ++D++ +   + +A  +   +P A + V W +++
Sbjct: 465 KKIFASMTDEYNITPKLEHYGC----MVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPD 592
           S C  +GE  L L  +   R+  + PD
Sbjct: 521 SACRIHGE--LELGKFAAKRILELEPD 545



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 33/269 (12%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           FS++    +   L   K  H+ I  +    +  + N L+ MY++CG L   R +F+KMP 
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+++SW+S++ A +  GE      ++   LF  +++     + +T   +L  C  SG V 
Sbjct: 408 RNVVSWSSMINALSMHGEA-----SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462

Query: 177 ASETVHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLW 228
             + +         + DE+         G +V+++ +   +REA  + + M    +VV+W
Sbjct: 463 EGKKI------FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516

Query: 229 KVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYA 285
             ++   R + E   G+      ++L      PD +     L ++S++  R +       
Sbjct: 517 GSLMSACRIHGELELGKFAAKRILELE-----PDHDG---ALVLMSNIYAREQRWEDVRN 568

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
           I+ ++   N   V   K LS   Q G +H
Sbjct: 569 IRRVMEEKN---VFKEKGLSRIDQNGKSH 594


>gi|147864471|emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
          Length = 871

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 217/642 (33%), Positives = 322/642 (50%), Gaps = 90/642 (14%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN-LNLGQ 352
           N  VVL    +SG+ ++G +   +  F  M    V  +  T  + L + +   N   +G+
Sbjct: 63  NGCVVL----ISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGK 118

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-GLRTDQFTLASVLRASSSLPEGLHLSK 411
            IHG  L++G     ++ NS+++ Y K  C C G     F L +                
Sbjct: 119 GIHGWILRNGVDLDAVLNNSILDYYVK--CRCFGYAEKLFGLMA---------------- 160

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
                  + DTV+ + + ++    Y + G M ++  LF    G D A+WN MI G + + 
Sbjct: 161 -------EKDTVSWNIMMSS----YLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNG 209

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
               ALEL   M  +G   +++T + A+     L +L  GKQ+H   +K G   D  V +
Sbjct: 210 CERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRN 269

Query: 532 GILDMYVKCGAMVDAQSIFNDIP----------APDD-----VAWTTMISGCVDNGEEDL 576
            ++DMY KCG M  A  IF  +P          + DD     V+W++M+SG V NG  + 
Sbjct: 270 SLIDMYCKCGEMEKASVIFKHLPRESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFED 329

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL  +  M  S V  D+FT   +V A +    LE GRQ+H  + K+    D F+G S++D
Sbjct: 330 ALKTFSSMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIID 389

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MY KCG++ DA+++F Q   RN VLW +M+ G A HG G E ++LFE M   G+ P+ V+
Sbjct: 390 MYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVS 449

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           F+GVL+ACS+ GL+ E  + F LMRE YGI P  EH++ +VD  GRAGR  E  E I + 
Sbjct: 450 FVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNN 509

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVT 816
                +S+ R+ L +CRV  + E G W          F   A+V LS         D   
Sbjct: 510 AISKLSSVWRSFLSSCRVHKNIEMGIWDLT-------FCFLAFVPLSK--------DGKR 554

Query: 817 SA--RGEMKRKNVKKDPAD-----------------------LIFAKVEGLIKRIKEGGY 851
           SA  R  M+++ VKK+P+                         I++ ++ LI R+KE GY
Sbjct: 555 SAKIRSLMQQRGVKKNPSQSWIQLKNHVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGY 614

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
             D   V+ DVE+E+++  L YHSEKLA AYG+IST P + I
Sbjct: 615 STDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPI 656



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 236/542 (43%), Gaps = 104/542 (19%)

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSS-GYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           LF  +++     ++ TL+ +LK C S+       + +HG+ L+ G+  D  ++ ++++ Y
Sbjct: 84  LFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGVDLDAVLNNSILDYY 143

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            K      A+ LF  M E+D V W +M+ +Y + G  ++   LF  L      P  ++  
Sbjct: 144 VKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL------PGKDAAS 197

Query: 265 CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                              WN  + G ++ G    A+E    M+
Sbjct: 198 -----------------------------------WNTMIDGLMRNGCERVALELLYKMV 222

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
            +   ++ +TF +AL   +    L LG+QIH   LK G      V NSLI+MY    C C
Sbjct: 223 AAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMY----CKC 278

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G    +   ASV+          HL                            R  SM  
Sbjct: 279 G----EMEKASVIFK--------HLP---------------------------RESSMMN 299

Query: 445 AEYLFENKDG--FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           +E   E+ D    +  +W++M+ GY+ +     AL+ FS M  S   +D+ T+ + V AC
Sbjct: 300 SE---ESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLTSVVSAC 356

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
               +L+ G+Q+H Y  K G  LD+ + S I+DMYVKCG++ DA  IFN     + V WT
Sbjct: 357 ASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWT 416

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG---RQIHANL 619
           +MISGC  +G+   A+ ++  M   G+ P+E +F  ++ A S    LE+G    ++   +
Sbjct: 417 SMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREV 476

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-----LWNAMLVGLAQHGN 674
             +   ++ F    +VD+Y + G + +     K+    N +     +W + L     H N
Sbjct: 477 YGIRPGAEHFT--CMVDLYGRAGRLNE----IKEFIHNNAISKLSSVWRSFLSSCRVHKN 530

Query: 675 GE 676
            E
Sbjct: 531 IE 532



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 21/238 (8%)

Query: 57  FSI-LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           FSI L  A S S L LGK  H ++L    + D F+ N+L+ MY +CG +  A  +F  +P
Sbjct: 233 FSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLP 292

Query: 116 DR---------------DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
                            + +SW+S+++ Y  +G        +  + F S+  S     + 
Sbjct: 293 RESSMMNSEESCDDAVVESVSWSSMVSGYVQNG-----GFEDALKTFSSMICSQVEVDKF 347

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           TL  ++  C S+G +     VHGY  KIG   D F+  +++++Y K G + +A  +F+  
Sbjct: 348 TLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQA 407

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           ++R+VVLW  M+   A +G G E   LF  +   G+ P++ S   VL   S  G   E
Sbjct: 408 KDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEE 465



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 93/399 (23%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           + +D  +GK  H  IL +    D  L N+++  Y +C    YA +LF  M ++D +SWN 
Sbjct: 110 NVNDSRIGKGIHGWILRNGVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNI 169

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTS-----------RLTLAPLLK---- 167
           ++++Y   G+     + +   LFR L  +++ ++ +           R+ L  L K    
Sbjct: 170 MMSSYLQIGD-----MQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAA 224

Query: 168 ------LCLSSGYVWAS--------ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                 L  S   V AS        + +H   LK+G++ D FV  +L+++Y K G++ +A
Sbjct: 225 GPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKA 284

Query: 214 KFLFDGMQER---------------DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
             +F  +                  + V W  M+  Y +NG  E+    F  +  S +  
Sbjct: 285 SVIFKHLPRESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEV 344

Query: 259 DDESVQCVLGVISDLGKRH-EEQVQAYAIKL--------------------------LLY 291
           D  ++  V+   +  G      QV  Y  K+                          L++
Sbjct: 345 DKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIF 404

Query: 292 NN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA------ 343
           N   + NVVLW   +SG    G    A+  F  MI   +  + V+F+  L A +      
Sbjct: 405 NQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLE 464

Query: 344 -GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            G     L ++++G    +  ++       ++++Y + G
Sbjct: 465 EGCKYFRLMREVYGIRPGAEHFTC------MVDLYGRAG 497


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 203/589 (34%), Positives = 302/589 (51%), Gaps = 58/589 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMA 443
           G+R D  T AS L A S L E L + +++H + IK+D +A +SFV++AL+D+Y  +  + 
Sbjct: 114 GVRPDGVTFASALPACSRL-ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVG 172

Query: 444 EAEYLFE--NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVK 500
           +A  +F+     G  L  WNAMI GY  +    +AL LF+ M   +G    E T+A+ + 
Sbjct: 173 KARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 232

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC         + +H Y +K G   +  V + ++DMY + G    A+ IF  +  PD V+
Sbjct: 233 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 292

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRL---SGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           W T+I+GCV  G    A  +  +M+     GVVP+  T   L+   + L A  +G++IH 
Sbjct: 293 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 352

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
             ++    +D  VG +LVDMYAKCG +  +  +F ++  RNT+ WN +++    HG G E
Sbjct: 353 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 412

Query: 678 TLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
              LF+ M A G   P+ VTF+  L+ACS++G+V    + FH M   +G+EP  +  + +
Sbjct: 413 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 472

Query: 737 VDALGRAGRTKEAGELILSMPF-EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
           VD LGRAGR  EA  ++ SM   E   S    +LGACR+  +   G+   E+L+ LEP +
Sbjct: 473 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 532

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------ 849
           +S YVLL NI++AA QW      R  M+R+ V K+P    + +V+G I R   G      
Sbjct: 533 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG-CSWIEVDGAIHRFMAGESAHPA 591

Query: 850 ------------------GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
                             GY PDT  VL D+++ +K   L  HSEKLA A+GL+   P +
Sbjct: 592 SEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA 651

Query: 892 VILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
            I   K     N                       RFHH R+G C C D
Sbjct: 652 TIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGD 700



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 182/368 (49%), Gaps = 15/368 (4%)

Query: 391 FTLASVLRASSSLPEG---LHLSKQIHVHAIKNDTVA--DSFVSTALIDVYCRNGSMAEA 445
           FTL SVLRA S LP     + L ++ H  A+KN  +     F   AL+ +Y R G +A+A
Sbjct: 11  FTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADA 70

Query: 446 EYLFENKDGF--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           + LF        D+ TWN M+   + S    +A++    M   G R D +T A+A+ AC 
Sbjct: 71  QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 130

Query: 504 CLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV--A 560
            L +L  G++MHAY +K      +  V+S ++DMY     +  A+ +F+ +P        
Sbjct: 131 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 190

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           W  MI G    G ++ AL ++ +M   +G VP E T A ++ A +   A      +H  +
Sbjct: 191 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 250

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           +K   + + FV  +L+DMYA+ G  + A  +F  +D+ + V WN ++ G    G+  +  
Sbjct: 251 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 310

Query: 680 KLFEDMKA---HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           +L  +M+     GV P+++T + +L  C+     +   E  H    ++ ++ +V   S L
Sbjct: 311 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKE-IHGYAVRHALDTDVAVGSAL 369

Query: 737 VDALGRAG 744
           VD   + G
Sbjct: 370 VDMYAKCG 377



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 204/500 (40%), Gaps = 86/500 (17%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW--DEFVSGALVNIYSKFGKIRE 212
           +FT    L  +  L  ++  V      H +ALK GL+     F   AL+++Y++ G + +
Sbjct: 10  SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 69

Query: 213 AKFLFDGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           A+ LF G      DVV W  M+    ++G  +E      D+   G+ PD  +    L   
Sbjct: 70  AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 129

Query: 271 S-----DLGKR---------------------------HEEQVQAYAIKLLLYNNNSNVV 298
           S     D+G+                            HE+  +A  +  ++ ++   + 
Sbjct: 130 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 189

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           +WN  + GY Q G +  A+  F  M   +       T    L A A ++     + +HG 
Sbjct: 190 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGY 249

Query: 358 TLKSGFYSAVIVGNSLINMYSKM--------------------------GCVC-GLRTDQ 390
            +K G      V N+L++MY+++                          GCV  G   D 
Sbjct: 250 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 309

Query: 391 FTLA---SVLRASSSLPEGLHL---------------SKQIHVHAIKNDTVADSFVSTAL 432
           F LA     L     +P  + L                K+IH +A+++    D  V +AL
Sbjct: 310 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 369

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLD 491
           +D+Y + G +A +  +F+     +  TWN +I  Y +     +A  LF  M  SGE R +
Sbjct: 370 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 429

Query: 492 EITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           E+T   A+ AC    M+ +G Q+ HA     G E    + + ++D+  + G + +A ++ 
Sbjct: 430 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 489

Query: 551 NDIPAPDD--VAWTTMISGC 568
             + A +    AW+TM+  C
Sbjct: 490 TSMEAGEQQVSAWSTMLGAC 509



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 154/325 (47%), Gaps = 20/325 (6%)

Query: 483 MHTSGERLDEITIATAVKACGCL----LMLKQGKQMHAYAMKSGF--ELDLCVSSGILDM 536
           M   G  L   T+ + ++A   L      ++ G++ HA+A+K+G          + +L M
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 537 YVKCGAMVDAQSIF-NDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           Y + G + DAQ +F    P   DV  W TM+S  V +G  D A+   + M   GV PD  
Sbjct: 61  YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
           TFA  + A S L  L+ GR++HA +IK D  +++ FV  +LVDMYA    +  A  +F  
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180

Query: 654 M--DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLV 710
           +    +   +WNAM+ G AQ G  EE L+LF  M+A  G  P   T   VL AC+     
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACAR---- 236

Query: 711 SEAY---ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           SEA+   E  H    K G+       + L+D   R G+T  A  +   +      S +  
Sbjct: 237 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN-T 295

Query: 768 LLGACRVQGDTETGKWVAEKLMALE 792
           L+  C VQG       +A ++  LE
Sbjct: 296 LITGCVVQGHVADAFQLAREMQQLE 320



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 10/217 (4%)

Query: 63  AISTSDLLLGK-STHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           A + S+   GK + H  ++      +RF+ N LM MY+R G    ARR+F  +   D++S
Sbjct: 233 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 292

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFR---SLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           WN+++      G     +V + F+L R    L E     + +TL  LL  C         
Sbjct: 293 WNTLITGCVVQG-----HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARG 347

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +HGYA++  L  D  V  ALV++Y+K G +  ++ +FD +  R+ + W V++ AY  +
Sbjct: 348 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 407

Query: 239 GFGEEVFHLFVDLHRSGLC-PDDESVQCVLGVISDLG 274
           G G E   LF  +  SG   P++ +    L   S  G
Sbjct: 408 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 444



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 43/330 (13%)

Query: 63  AISTSDLL-LGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RD 118
           A S  +LL +G+  HA ++   ++  + F+ + L+ MY+    +  AR++FD +PD  + 
Sbjct: 128 ACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQ 187

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS-RLTLAPLLKLCLSSGYVWA 177
           L  WN+++  YA +G        E  RLF  +     F     T+A +L  C  S     
Sbjct: 188 LGMWNAMICGYAQAGMDE-----EALRLFARMEAEAGFVPCETTMASVLPACARSEAFAG 242

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E VHGY +K G+  + FV  AL+++Y++ GK   A+ +F  +   DVV W  ++     
Sbjct: 243 KEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 302

Query: 238 NGFGEEVFHL---FVDLHRSGLCPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNN 293
            G   + F L      L   G+ P+  ++  +L G          +++  YA++  L  +
Sbjct: 303 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTD 362

Query: 294 ----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         N + WN  +  Y   G    A   F  M  
Sbjct: 363 VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTA 422

Query: 326 SN-VQYDSVTFLVALAAVAGTDNLNLGQQI 354
           S   + + VTF+ ALAA + +  ++ G Q+
Sbjct: 423 SGEARPNEVTFMAALAACSHSGMVDRGLQL 452


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 195/573 (34%), Positives = 299/573 (52%), Gaps = 55/573 (9%)

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF---ENK 452
           +L+A ++LP+      Q+H H IK     +  V T          ++  A  L    E+ 
Sbjct: 13  ILQACNTLPK----LAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDA 68

Query: 453 DGFDLATWNAMIFGYILSNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
             +D   ++ +I  Y  S+ S H A+  ++ M   G   ++      +KAC  L  L  G
Sbjct: 69  RVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLG 128

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKC-GAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           K +H   +K GF+ D+ V + ++ MY  C G M  A+ +F+++P  D V WT MI G   
Sbjct: 129 KAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYAR 188

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
            G+   A+ ++ +M+++GV PD+ T   ++ A + L ALE G+ I + + K        +
Sbjct: 189 LGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVEL 248

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +LVDM+AKCG+++ A  LF+ M  R  V W +++VGLA HG G E + LFE+MKA G+
Sbjct: 249 SNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGM 308

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
            P+ + FIG+LSACS++GLV    + F  M  ++GI P++EHY  +VD L RAG   EA 
Sbjct: 309 VPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEAL 368

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           E +  MP E +  + R L+ ACRV G+ + G+ ++++L+  EP   S YVLLSNI+    
Sbjct: 369 EFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKML 428

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
            W+  +  R  M +K ++K P                        + I   V  + + +K
Sbjct: 429 DWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMK 488

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
             GY P T  V LD++EE+KE AL  HSEKLA A+ L++TPP S I              
Sbjct: 489 RAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHS 548

Query: 894 -------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                  + N+E +  +  RFHH RDG C C D
Sbjct: 549 ASKFISKIYNREIVMRDRSRFHHFRDGQCSCGD 581



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 6/203 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-GSLVYARRLFDKMPDR 117
           +L+      DL LGK+ H  ++      D F+ N ++ MY  C G + +AR+LFD+MP  
Sbjct: 115 VLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKL 174

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D ++W +++  YA  G+           LFR ++ +      +T+  +L  C   G +  
Sbjct: 175 DPVTWTAMIGGYARLGQSAG-----AVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALEL 229

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +  Y  K  ++    +S ALV++++K G + +A  LF  M +R +V W  ++   A 
Sbjct: 230 GKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAM 289

Query: 238 NGFGEEVFHLFVDLHRSGLCPDD 260
           +G G E   LF ++  SG+ P+D
Sbjct: 290 HGRGLEAVSLFEEMKASGMVPED 312



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 151/351 (43%), Gaps = 51/351 (14%)

Query: 284 YAIKLLLYNNNSNV---VLWNKKLSGYLQVGDN-HGAIECFVNMIRSNVQYDSVTFLVAL 339
           YA+ L+    ++ V    L++  +  Y +   + H AI  +  M+   +  +   F   L
Sbjct: 57  YAMSLVFSVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVL 116

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM----------------------- 376
            A AG  +LNLG+ +HG+ +K GF   + V N++++M                       
Sbjct: 117 KACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDP 176

Query: 377 ---------YSKMG------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
                    Y+++G             + G+  D  T+ SVL A + L   L L K I  
Sbjct: 177 VTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDL-GALELGKWIES 235

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           +  K   +    +S AL+D++ + G + +A  LF N     + +W ++I G  +     +
Sbjct: 236 YIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLE 295

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGIL 534
           A+ LF  M  SG   ++I     + AC    ++++G+Q  +   +  G    +     ++
Sbjct: 296 AVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMV 355

Query: 535 DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           D+  + G + +A      +P  P+ + W T+IS C  +GE  L  SI  Q+
Sbjct: 356 DLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQL 406



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 10/192 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L        L LGK   + I     +    L+N L+ M+++CG +  A  LF  M  R
Sbjct: 216 SVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKR 275

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W 176
            ++SW S++   A  G G      E   LF  ++ S      +    LL  C  SG V  
Sbjct: 276 TIVSWTSVIVGLAMHGRG-----LEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVER 330

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML--- 232
             +       + G+V      G +V++ S+ G + EA    + M  E + ++W+ ++   
Sbjct: 331 GRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISAC 390

Query: 233 RAYAENGFGEEV 244
           R + E   GE +
Sbjct: 391 RVHGELKLGESI 402


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 244/822 (29%), Positives = 385/822 (46%), Gaps = 93/822 (11%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFD 218
            L P +K   +     ++  +H  AL+ GL+      V+ AL+  Y++ G++  A  +F 
Sbjct: 59  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118

Query: 219 GMQE--RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--- 273
            + +   D V +  ++ A       +        +   G      ++  VL  +S L   
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 274 --GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
               R   +  A+A+K  L + +     +N  LS Y ++G    A   F           
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFA-FNALLSMYARLGLVADAQRLFAG--------- 228

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
                    A  G  ++     +    ++SG +   +   +L +M +      G+R D  
Sbjct: 229 ---------ATPGRGDVVTWNTMVSVLVQSGMFDEAV--QTLYDMVA-----LGVRPDGV 272

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFE 450
           T AS L A S L E L + +++H + IK+D +A +SFV++AL+D+Y  +  + +A  +F+
Sbjct: 273 TFASALPACSRL-ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 331

Query: 451 --NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLM 507
                G  L  WNAMI GY  +    +AL LF+ M   +G    E T+A+ + AC     
Sbjct: 332 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 391

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
               + +H Y +K G   +  V + ++DMY + G    A+ IF  +  PD V+W T+I+G
Sbjct: 392 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451

Query: 568 CVDNGEEDLALSIYHQMRL---SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           CV  G    A  +  +M+     GVVP+  T   L+   + L A  +G++IH   ++   
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            +D  VG +LVDMYAKCG +  +  +F ++  RNT+ WN +++    HG G E   LF+ 
Sbjct: 512 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 685 MKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           M A G   P+ VTF+  L+ACS++G+V    + FH M   +G+EP  +  + +VD LGRA
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 631

Query: 744 GRTKEAGELILSMPF-EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           GR  EA  ++ SM   E   S    +LGACR+  +   G+   E+L+ LEP ++S YVLL
Sbjct: 632 GRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 691

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------- 849
            NI++AA QW      R  M+R+ V K+P    + +V+G I R   G             
Sbjct: 692 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPG-CSWIEVDGAIHRFMAGESAHPASEEVHAH 750

Query: 850 -----------GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
                      GY PDT  VL D+++ +K   L  HSEKLA A+GL+   P + I   K 
Sbjct: 751 MEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKN 810

Query: 899 PLYAN-----------------------RFHHLRDGMCPCAD 917
               N                       RFHH R+G C C D
Sbjct: 811 LRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGD 852



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 143/605 (23%), Positives = 248/605 (40%), Gaps = 103/605 (17%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           ++ A +  D    ++ HA  L    +  P   + N L+T Y+RCG L  A  +F  + D 
Sbjct: 64  IKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDS 123

Query: 117 -RDLISWNSILAA------YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
             D +S+NS+++A      + H+       +  G  L        +FT    L  +  L 
Sbjct: 124 AHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPL-------TSFTLVSVLRAVSHLP 176

Query: 170 LSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDV 225
            ++  V      H +ALK GL+     F   AL+++Y++ G + +A+ LF G      DV
Sbjct: 177 AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDV 236

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR---- 276
           V W  M+    ++G  +E      D+   G+ PD  +    L   S     D+G+     
Sbjct: 237 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 296

Query: 277 -----------------------HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
                                  HE+  +A  +  ++ ++   + +WN  + GY Q G +
Sbjct: 297 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 356

Query: 314 HGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             A+  F  M   +       T    L A A ++     + +HG  +K G      V N+
Sbjct: 357 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNA 416

Query: 373 LINMYSKM--------------------------GCVC-GLRTDQFTLA---SVLRASSS 402
           L++MY+++                          GCV  G   D F LA     L     
Sbjct: 417 LMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 476

Query: 403 LPEGLHL---------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           +P  + L                K+IH +A+++    D  V +AL+D+Y + G +A +  
Sbjct: 477 VPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRA 536

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLL 506
           +F+     +  TWN +I  Y +     +A  LF  M  SGE R +E+T   A+ AC    
Sbjct: 537 VFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 596

Query: 507 MLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTT 563
           M+ +G Q+ HA     G E    + + ++D+  + G + +A ++   + A +    AW+T
Sbjct: 597 MVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWST 656

Query: 564 MISGC 568
           M+  C
Sbjct: 657 MLGAC 661



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 208/456 (45%), Gaps = 40/456 (8%)

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           +G ++A +   S I M S        + D   L   ++++++L +    ++ IH  A++ 
Sbjct: 33  AGNHAAALRALSSITMASPQ-----QQLDHSALPPAIKSAAALRDA-RSARAIHAAALRR 86

Query: 421 DTV--ADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKA 476
             +      V+ AL+  Y R G +A A  +F +      D  ++N++I    L      A
Sbjct: 87  GLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHA 146

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCL----LMLKQGKQMHAYAMKSGF--ELDLCVS 530
           L     M   G  L   T+ + ++A   L      ++ G++ HA+A+K+G          
Sbjct: 147 LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF 206

Query: 531 SGILDMYVKCGAMVDAQSIF-NDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + +L MY + G + DAQ +F    P   DV  W TM+S  V +G  D A+   + M   G
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDA 647
           V PD  TFA  + A S L  L+ GR++HA +IK D  +++ FV  +LVDMYA    +  A
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326

Query: 648 YILF-------KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIG 699
             +F       KQ+ M     WNAM+ G AQ G  EE L+LF  M+A  G  P   T   
Sbjct: 327 RQVFDMVPDSGKQLGM-----WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMAS 381

Query: 700 VLSACSYTGLVSEAY---ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           VL AC+     SEA+   E  H    K G+       + L+D   R G+T  A  +   +
Sbjct: 382 VLPACAR----SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 437

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
                 S +  L+  C VQG       +A ++  LE
Sbjct: 438 DLPDVVSWN-TLITGCVVQGHVADAFQLAREMQQLE 472


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 194/589 (32%), Positives = 292/589 (49%), Gaps = 83/589 (14%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE-----AEYLFENKDGFDLATWNAMIF 465
           K IH + I+   + D F ++ LI  +C + S        A  +F      +L  +NAMI 
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLI-AFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIR 92

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           G+  S N  +A   +      G   D +T    VK+C  L  +  G Q H + +K GFE 
Sbjct: 93  GHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEK 152

Query: 526 DLCVSSGILDMYV-------------------------------KCGAMVDAQSIFNDIP 554
           D+ V + ++ MY                                KCG +  A+ +F+ +P
Sbjct: 153 DVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMP 212

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             + V W+TMISG   N   D A+ ++  ++  GV  +E     ++ + + L ALE G +
Sbjct: 213 EKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGER 272

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H  ++K   + +  +G +LVDMYA+CG+I+ A  +F+ +  R+T+ W A++ GLA HG 
Sbjct: 273 AHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGY 332

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            E +LK F  M   G+ P  +TF  VLSACS+ GLV   ++ F  M+  + +EP +EHY 
Sbjct: 333 SERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYG 392

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD LGRAG+ +EA   +L MP + +A +  ALLGACR+  + E G+ V + L+ L P 
Sbjct: 393 CMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQ 452

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
            S  YVLLSNI+A A +W+ VT  R  MK K +KK P                       
Sbjct: 453 HSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPE 512

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            D I    E ++ RI+  GY  +T   L D++EEEKE AL+ HSEKLA A+G++ +   +
Sbjct: 513 MDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGT 572

Query: 892 VI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            I                     +  +E +    NRFHH R G+C C D
Sbjct: 573 PIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMD 621



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 97/183 (53%), Gaps = 5/183 (2%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
            +++  +++CG +  AR+LFD+MP+++L++W+++++ YA +      +  +   LF+ L+
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNN-----HFDKAVELFKVLQ 243

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 +   +  ++  C   G +   E  H Y +K G+  +  +  ALV++Y++ G I 
Sbjct: 244 SQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSID 303

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           +A ++F+ + ERD + W  ++   A +G+ E     F  +  +GL P D +   VL   S
Sbjct: 304 KAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACS 363

Query: 272 DLG 274
             G
Sbjct: 364 HGG 366



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 50/323 (15%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMY---SRCGSLV-YARRLFDKMPDRDLI 120
           + SDL   K  HA ++ +  I D F  + L+      S   SL+ YA R+F ++ + +L 
Sbjct: 26  TCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLF 85

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            +N+++    HSG  N +   + F  +   +        LT   L+K C     +     
Sbjct: 86  IFNAMIRG--HSGSKNPD---QAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQ 140

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
            HG+ +K G   D +V  +LV++Y+ FG    A  +F  M   DVV W  M+R + +   
Sbjct: 141 AHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK--- 197

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
                           C D ES                      A KL       N+V W
Sbjct: 198 ----------------CGDVES----------------------ARKLFDQMPEKNLVTW 219

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           +  +SGY Q      A+E F  +    V+ +    +  +++ A    L LG++ H   +K
Sbjct: 220 STMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVK 279

Query: 361 SGFYSAVIVGNSLINMYSKMGCV 383
           +G    +I+G +L++MY++ G +
Sbjct: 280 NGMTLNLILGTALVDMYARCGSI 302



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/426 (20%), Positives = 183/426 (42%), Gaps = 65/426 (15%)

Query: 179 ETVHGYALKIGLVWDEFVSGAL----VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           + +H Y ++  ++ D F +  L    V+  S    I  A  +F  +Q  ++ ++  M+R 
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQAYAIKLL 289
           ++ +   ++ FH +V   R GL PD+ +   ++   + L     G +    +  +  +  
Sbjct: 94  HSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD 153

Query: 290 LYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
           +Y  NS                        +VV W   + G+ + GD   A + F  M  
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
            N+    VT+   ++  A  ++ +   ++    L+S                       G
Sbjct: 214 KNL----VTWSTMISGYAQNNHFDKAVELF-KVLQSQ----------------------G 246

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           +R ++  + SV+ + + L   L L ++ H + +KN    +  + TAL+D+Y R GS+ +A
Sbjct: 247 VRANETVMVSVISSCAHLG-ALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKA 305

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
            ++FE+    D  +W A+I G  +   S ++L+ F+ M  +G    +IT    + AC   
Sbjct: 306 VWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHG 365

Query: 506 LMLKQGKQMHAYAMKSGFELD--LCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWT 562
            ++++G Q+   +MK    ++  L     ++D+  + G + +A+     +P  P+   W 
Sbjct: 366 GLVERGFQIFE-SMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWG 424

Query: 563 TMISGC 568
            ++  C
Sbjct: 425 ALLGAC 430



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 33/252 (13%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILRHAISTSDL 69
           F +   +NL ++S  +  + Q +HF  +             ++ +   S++        L
Sbjct: 208 FDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGAL 267

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
            LG+  H  ++ +    +  L   L+ MY+RCGS+  A  +F+ +P+RD +SW +++A  
Sbjct: 268 ELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGL 327

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           A  G           + F ++ E+      +T   +L  C   G V       G+ +   
Sbjct: 328 AMHGYSE-----RSLKYFATMVEAGLTPRDITFTAVLSACSHGGLV-----ERGFQIFES 377

Query: 190 LVWDEFVS------GALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML---RAYAENG 239
           +  D  V       G +V++  + GK+ EA +F+     + +  +W  +L   R +    
Sbjct: 378 MKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAE 437

Query: 240 FGEEVFHLFVDL 251
            GE V  + + L
Sbjct: 438 IGERVGKILIQL 449


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 244/822 (29%), Positives = 385/822 (46%), Gaps = 93/822 (11%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFD 218
            L P +K   +     ++  +H  AL+ GL+      V+ AL+  Y++ G++  A  +F 
Sbjct: 61  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 120

Query: 219 GMQE--RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL--- 273
            + +   D V +  ++ A       +        +   G      ++  VL  +S L   
Sbjct: 121 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 180

Query: 274 --GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
               R   +  A+A+K  L + +     +N  LS Y ++G    A   F           
Sbjct: 181 AAAVRLGREAHAFALKNGLLHGHQRFA-FNALLSMYARLGLVADAQRLFAG--------- 230

Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
                    A  G  ++     +    ++SG +   +   +L +M +      G+R D  
Sbjct: 231 ---------ATPGRGDVVTWNTMVSVLVQSGMFDEAV--QTLYDMVA-----LGVRPDGV 274

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-DSFVSTALIDVYCRNGSMAEAEYLFE 450
           T AS L A S L E L + +++H + IK+D +A +SFV++AL+D+Y  +  + +A  +F+
Sbjct: 275 TFASALPACSRL-ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 333

Query: 451 --NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLM 507
                G  L  WNAMI GY  +    +AL LF+ M   +G    E T+A+ + AC     
Sbjct: 334 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 393

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
               + +H Y +K G   +  V + ++DMY + G    A+ IF  +  PD V+W T+I+G
Sbjct: 394 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 453

Query: 568 CVDNGEEDLALSIYHQMRL---SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           CV  G    A  +  +M+     GVVP+  T   L+   + L A  +G++IH   ++   
Sbjct: 454 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 513

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
            +D  VG +LVDMYAKCG +  +  +F ++  RNT+ WN +++    HG G E   LF+ 
Sbjct: 514 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 573

Query: 685 MKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           M A G   P+ VTF+  L+ACS++G+V    + FH M   +G+EP  +  + +VD LGRA
Sbjct: 574 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 633

Query: 744 GRTKEAGELILSMPF-EASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           GR  EA  ++ SM   E   S    +LGACR+  +   G+   E+L+ LEP ++S YVLL
Sbjct: 634 GRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 693

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEG------------- 849
            NI++AA QW      R  M+R+ V K+P    + +V+G I R   G             
Sbjct: 694 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPG-CSWIEVDGAIHRFMAGESAHPASEEVHAH 752

Query: 850 -----------GYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
                      GY PDT  VL D+++ +K   L  HSEKLA A+GL+   P + I   K 
Sbjct: 753 MEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKN 812

Query: 899 PLYAN-----------------------RFHHLRDGMCPCAD 917
               N                       RFHH R+G C C D
Sbjct: 813 LRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGD 854



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 247/605 (40%), Gaps = 103/605 (17%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD- 116
           ++ A +  D    ++ HA  L    +  P   + N L+T Y+RCG L  A  +F  + D 
Sbjct: 66  IKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDS 125

Query: 117 -RDLISWNSILAA------YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
             D +S+NS+++A      + H+       +  G  L        +FT    L  +  L 
Sbjct: 126 AHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPL-------TSFTLVSVLRAVSHLP 178

Query: 170 LSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDV 225
            ++  V      H +ALK GL+     F   AL+++Y++ G + +A+ LF G      DV
Sbjct: 179 AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDV 238

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKR---- 276
           V W  M+    ++G  +E      D+   G+ PD  +    L   S     D+G+     
Sbjct: 239 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 298

Query: 277 -----------------------HEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
                                  HE+  +A  +  ++ ++   + +WN  + GY Q G +
Sbjct: 299 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 358

Query: 314 HGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
             A+  F  M   +       T    L A A ++     + +HG  +K G      V N+
Sbjct: 359 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNA 418

Query: 373 LINMYSKM--------------------------GCVC-GLRTDQFTLA---SVLRASSS 402
           L++MY+++                          GCV  G   D F LA     L     
Sbjct: 419 LMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 478

Query: 403 LPEGLHL---------------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
           +P  + L                K+IH +A+++    D  V +AL+D+Y + G +A +  
Sbjct: 479 VPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRA 538

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLL 506
           +F+     +  TWN +I  Y +     +A  LF  M  SGE R +E+T   A+ AC    
Sbjct: 539 VFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 598

Query: 507 MLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTT 563
           M+ +G Q+ HA     G E    + + ++D+  + G + +A ++   +   +    AW+T
Sbjct: 599 MVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWST 658

Query: 564 MISGC 568
           M+  C
Sbjct: 659 MLGAC 663



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 208/456 (45%), Gaps = 40/456 (8%)

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           +G ++A +   S I M S        + D   L   ++++++L +    ++ IH  A++ 
Sbjct: 35  AGNHAAALRALSSITMASPQ-----QQLDHSALPPAIKSAAALRDA-RSARAIHAAALRR 88

Query: 421 DTV--ADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKA 476
             +      V+ AL+  Y R G +A A  +F +      D  ++N++I    L      A
Sbjct: 89  GLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHA 148

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCL----LMLKQGKQMHAYAMKSGF--ELDLCVS 530
           L     M   G  L   T+ + ++A   L      ++ G++ HA+A+K+G          
Sbjct: 149 LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF 208

Query: 531 SGILDMYVKCGAMVDAQSIF-NDIPAPDDV-AWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + +L MY + G + DAQ +F    P   DV  W TM+S  V +G  D A+   + M   G
Sbjct: 209 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 268

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDMYAKCGNIEDA 647
           V PD  TFA  + A S L  L+ GR++HA +IK D  +++ FV  +LVDMYA    +  A
Sbjct: 269 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 328

Query: 648 YILF-------KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSVTFIG 699
             +F       KQ+ M     WNAM+ G AQ G  EE L+LF  M+A  G  P   T   
Sbjct: 329 RQVFDMVPDSGKQLGM-----WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMAS 383

Query: 700 VLSACSYTGLVSEAY---ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           VL AC+     SEA+   E  H    K G+       + L+D   R G+T  A  +   +
Sbjct: 384 VLPACAR----SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 439

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
                 S +  L+  C VQG       +A ++  LE
Sbjct: 440 DLPDVVSWN-TLITGCVVQGHVADAFQLAREMQQLE 474


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 55/548 (10%)

Query: 425  DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM- 483
            D FVS+ALID+Y + G + +A  LF+     ++ +W +MI GY+ +  +  AL LF    
Sbjct: 1176 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 1235

Query: 484  --HTSGE-----RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
               T  E      LD + + + + AC  +      + +H + +K GF+  + V + ++D 
Sbjct: 1236 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 1295

Query: 537  YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFT 595
            Y KCG  + ++ +F+ +   DD++W +MI+    +G    AL ++H M R  GV  +  T
Sbjct: 1296 YAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 1355

Query: 596  FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
             + ++ A +   AL  G+ IH  +IK+D   +  VG S++DMY KCG +E A   F +M 
Sbjct: 1356 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK 1415

Query: 656  MRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
             +N   W AM+ G   HG  +E L +F  M   GV+P+ +TF+ VL+ACS+ GLV E + 
Sbjct: 1416 EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWH 1475

Query: 716  NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQ 775
             F+ M+ KY IEP +EHY  +VD  GRAG   EA  LI  M  +    +  +LLGACR+ 
Sbjct: 1476 WFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIH 1535

Query: 776  GDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--- 832
             + + G+  A+KL  L+P +   YVLLSN++A A +W DV   R  MK + + K P    
Sbjct: 1536 KNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSL 1595

Query: 833  --------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALY 872
                                ++I+  +E L   +++ GYVP+   VL DV+EEEKE  L 
Sbjct: 1596 VELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILR 1655

Query: 873  YHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLR 909
             HSEKLA A+G++++ P + I                     L +++ +   + RFHH +
Sbjct: 1656 VHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFK 1715

Query: 910  DGMCPCAD 917
            DG+C C D
Sbjct: 1716 DGVCSCGD 1723



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 198/397 (49%), Gaps = 38/397 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +QIH   I++    D  ++  LI +Y  +G +A A  LF         TWN +I    ++
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             S +AL L+ +M   G   D+ T    +KAC   L +  GK +H   +K GF  D+ V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 531 SGILDMYVKCGA-------------------------------MVDAQSIFNDIPAPDDV 559
           + ++D Y KCG                                + +A+ IF++IP+ + V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT MI+G + N + + AL ++ +M+   + P+E+T   L+KA + +  L  GR IH   
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           IK       ++G +L+DMY+KCG+I+DA  +F+ M  ++   WN+M+  L  HG G+E L
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF +M+   V+PD++TFIGVL AC +   V E    F  M + YGI P  EHY  + + 
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 740 LGRAGR-------TKEAGELILSMPFEASASMHRALL 769
             R+         TKE G L  S      A   +A+L
Sbjct: 404 YARSNNLDEAFKSTKEVGSLANSPSICFDARAKQAVL 440



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 158/314 (50%), Gaps = 10/314 (3%)

Query: 445  AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
            A + ++  D  ++ +WN++I       +S +AL  FS +   G      +    +K+C  
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 505  LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
            L  L  G+  H  A   GFE DL VSS ++DMY KCG + DA+++F++IP  + V+WT+M
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214

Query: 565  ISGCVDNGEEDLALSIYH-------QMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIH 616
            I+G V N + D AL ++        ++     VP D      ++ A S ++       +H
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274

Query: 617  ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
              ++K        VG +L+D YAKCG    +  +F  M+ ++ + WN+M+   AQ G   
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334

Query: 677  ETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
            E L++F  M  H GV  ++VT   VL AC++ G +  A +  H    K  +E  V   + 
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGAL-RAGKCIHDQVIKMDLEYNVCVGTS 1393

Query: 736  LVDALGRAGRTKEA 749
            ++D   + GR + A
Sbjct: 1394 IIDMYCKCGRVEMA 1407



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 215/487 (44%), Gaps = 80/487 (16%)

Query: 291  YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            Y + SNV  WN  ++   + GD+  A+  F ++ +  +     +F   + + +   +L  
Sbjct: 1101 YVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVS 1160

Query: 351  GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTL--------------- 393
            G+  H      GF + + V ++LI+MYSK G +   R   D+  L               
Sbjct: 1161 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 1220

Query: 394  ----------------------------------ASVLRASSSLPEGLHLSKQIHVHAIK 419
                                               SVL A S +  G  +++ +H   +K
Sbjct: 1221 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV-SGKGITEGVHGFVVK 1279

Query: 420  NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                    V   L+D Y + G    ++ +F+  +  D  +WN+MI  Y  S  S +ALE+
Sbjct: 1280 KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEV 1339

Query: 480  FSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            F  M    G R + +T++  + AC     L+ GK +H   +K   E ++CV + I+DMY 
Sbjct: 1340 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 1399

Query: 539  KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
            KCG +  A+  F+ +   +  +WT M++G   +G    AL I+++M  +GV P+  TF  
Sbjct: 1400 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 1459

Query: 599  LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQM 654
            ++ A S    +E+G     N +K     +P  GI     +VD++ + G + +AY L K+M
Sbjct: 1460 VLAACSHAGLVEEGWHWF-NAMKHKYDIEP--GIEHYGCMVDLFGRAGCLNEAYNLIKRM 1516

Query: 655  DMR-NTVLWNAMLVGLAQHGN---GE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
             M+ + V+W ++L     H N   GE    KLFE      ++PD+         C Y  L
Sbjct: 1517 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE------LDPDN---------CGYYVL 1561

Query: 710  VSEAYEN 716
            +S  Y +
Sbjct: 1562 LSNLYAD 1568



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 32/281 (11%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            K  +Q+HA  ++SG   D  ++  ++ +Y   G +  A  +F  I  P    W  +I  
Sbjct: 40  FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              NG  + AL +Y  M   G+  D+FTF  ++KA +   +++ G+ +H +LIK   S D
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD 159

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG-------------- 673
            FV  +L+D Y KCG+   A  +F++M +RN V W  ++ GL   G              
Sbjct: 160 VFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS 219

Query: 674 ----------NG-------EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
                     NG       EE L+LF+ M+A  + P+  T + ++ AC+  G+++     
Sbjct: 220 KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RG 278

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            H    K  IE  V   + L+D   + G  K+A E+  +MP
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 139/316 (43%), Gaps = 47/316 (14%)

Query: 68   DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
            DL+ G+ +H +        D F+++ L+ MYS+CG L  AR LFD++P R+++SW S++ 
Sbjct: 1157 DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMIT 1216

Query: 128  AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL--------LKLCLSSGYVWASE 179
             Y  +     E       LF+   E  T        PL        L  C        +E
Sbjct: 1217 GYVQN-----EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 1271

Query: 180  TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
             VHG+ +K G      V   L++ Y+K G+   +K +FD M+E+D + W  M+  YA++G
Sbjct: 1272 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331

Query: 240  F-GE--EVFH------------------LFVDLH----RSGLCPDDESVQ-------CVL 267
              GE  EVFH                  L    H    R+G C  D+ ++       CV 
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391

Query: 268  GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
              I D+  +        A K        NV  W   ++GY   G    A++ F  M+R+ 
Sbjct: 1392 TSIIDMYCKCGR--VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG 1449

Query: 328  VQYDSVTFLVALAAVA 343
            V+ + +TF+  LAA +
Sbjct: 1450 VKPNYITFVSVLAACS 1465



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 6/184 (3%)

Query: 92   NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG-EGNAENVTEGFRLFRSL 150
            N LM  Y++CG  + ++++FD M ++D ISWNS++A YA SG  G A  V  G      +
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM-----V 1344

Query: 151  RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
            R      + +TL+ +L  C  +G + A + +H   +K+ L ++  V  +++++Y K G++
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404

Query: 211  REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
              AK  FD M+E++V  W  M+  Y  +G  +E   +F  + R+G+ P+  +   VL   
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464

Query: 271  SDLG 274
            S  G
Sbjct: 1465 SHAG 1468



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 27/345 (7%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   ++ GL  D+ ++  L+++YS  G+I  A  LF  +Q      W +++RA   NG 
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS 295
            E+   L+ ++   G+  D  +   V+   +     DLGK     V    IK   Y  + 
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK----VVHGSLIK---YGFSG 158

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V + N  +  Y + G    A++ F  M   NV    V++   ++ +    +L   ++I 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV----VSWTTVISGLISCGDLQEARRIF 214

Query: 356 GTTLKSGFYSAVIVGNSLIN---------MYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
                    S   + N  I          ++ +M     +  +++T+ S+++A + +   
Sbjct: 215 DEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-NIFPNEYTMVSLIKACTEMGI- 272

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L L + IH +AIKN      ++ TALID+Y + GS+ +A  +FE      L TWN+MI  
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
             +     +AL LFS M     + D IT    + AC  +  +K+G
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 43/301 (14%)

Query: 121  SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            SWNS++A  A  G+       E  R F SLR+     +R +    +K C +   + +   
Sbjct: 1109 SWNSVIADLARGGDS-----VEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 1163

Query: 181  VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
             H  A   G   D FVS AL+++YSK G++++A+ LFD +  R+VV W  M+  Y +N  
Sbjct: 1164 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 1223

Query: 241  GEEVFHLFVD-------LHRSGLCPDDESVQC-VLGVISDL-GKRHEEQVQAYAI----- 286
             +    LF D       +      P D  V   VL   S + GK   E V  + +     
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283

Query: 287  -----------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                                   K+  +    + + WN  ++ Y Q G +  A+E F  M
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343

Query: 324  IRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
            +R   V+Y++VT    L A A    L  G+ IH   +K      V VG S+I+MY K G 
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403

Query: 383  V 383
            V
Sbjct: 1404 V 1404



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 26/215 (12%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H  ++      D F+ NNL+  Y +CG   +A ++F+KM  R+++SW ++++   
Sbjct: 143 LGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI 202

Query: 131 HSG----------EGNAENVT----------------EGFRLFRSLRESITFTSRLTLAP 164
             G          E  ++NV                 E   LF+ ++    F +  T+  
Sbjct: 203 SCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           L+K C   G +     +H YA+K  +    ++  AL+++YSK G I++A  +F+ M  + 
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +  W  M+ +   +G G+E  +LF ++ R  + PD
Sbjct: 323 LPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPD 357



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 46/311 (14%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA+I+ S    D+ LT  L+ +YS  G + YA  LF ++ +    +WN I+ A   +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G        +   L++++        + T   ++K C +   +   + VHG  +K G   
Sbjct: 104 GLSE-----QALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D FV   L++ Y K G  R A  +F+ M+ R+VV W  ++      G  +E   +F ++ 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI- 217

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                                                    + NVV W   ++GY++   
Sbjct: 218 ----------------------------------------PSKNVVSWTAMINGYIRNQQ 237

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A+E F  M   N+  +  T +  + A      L LG+ IH   +K+     V +G +
Sbjct: 238 PEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTA 297

Query: 373 LINMYSKMGCV 383
           LI+MYSK G +
Sbjct: 298 LIDMYSKCGSI 308


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 211/638 (33%), Positives = 320/638 (50%), Gaps = 112/638 (17%)

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN--GSMAEAEY 447
           Q T+  +L   SS    LH  KQ+H  A++     D +VS  L+  Y      ++  A  
Sbjct: 28  QKTILDLLNTKSSTS--LHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALK 85

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +FE     ++  +N +I G + +N   KA+  +  M  +  R ++ T  T  KAC     
Sbjct: 86  VFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEA 145

Query: 508 LKQGKQMHAYAMKSGFELDLCV-SSGI------------------------------LDM 536
            ++G Q+HA+ +K G   D+ + S+GI                              +D 
Sbjct: 146 AEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDG 205

Query: 537 YVKCG---------------------AMV----------DAQSIFNDIPAPDDVAWTTMI 565
           Y+KCG                      MV          +A+ +FN++   ++++W+ MI
Sbjct: 206 YLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMI 265

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G +  G    AL +++ M+   + P +F  + ++ A + L AL+QGR IHA +     S
Sbjct: 266 DGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNS 325

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D  +G +LVDMYAKCG ++ A+ +F++M+ +    WNAM+ GL  HG  E+ ++LF  M
Sbjct: 326 FDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKM 385

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           +     P+ +T +GVLSAC+++G+V E    F+ M E YGIEP +EHY  +VD LGRAG 
Sbjct: 386 QKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGL 445

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             EA E++ SMP E SA++  ALLGACR  GD E G+ V + L+ LEP +S  Y LLSNI
Sbjct: 446 LGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNI 505

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGL 842
           +A A +WDDV + R  MK + VK                             I+  ++ +
Sbjct: 506 YARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNM 565

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------- 893
           IKR+K  G+ P+T  VL D+EEEEKE  L YHSEKLA A+GLI+T P + I         
Sbjct: 566 IKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMC 625

Query: 894 ------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                       + ++E +  +  R+HH + G C C D
Sbjct: 626 EDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKD 663



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 205/476 (43%), Gaps = 70/476 (14%)

Query: 156 FTSRLTLAPLLKL--CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK--FGKIR 211
           FTS+L+   +L L    SS  +   + VH  AL+ G   D +VSG LV  Y+   F  + 
Sbjct: 22  FTSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLN 81

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---- 267
            A  +F+ +   +V ++ ++++   +N    +    +  +  +   P+  +   +     
Sbjct: 82  FALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACT 141

Query: 268 ------------------GVISDLGKRHEEQVQAY--------AIKLLLYNNNSNVVLWN 301
                             G+  D+  R    +Q Y        A ++L  + NS+V+ +N
Sbjct: 142 AAEAAEEGVQVHAHVIKQGLSGDVHIR-SAGIQMYGSFGEVEGARRMLGEDGNSDVICFN 200

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG--------------TDN 347
             + GYL+ G+   A E F +M   NV   S   +V+  A  G               + 
Sbjct: 201 AMIDGYLKCGEVEAAKELFWSMEDKNV--GSWNVMVSGMAKCGMIEEARELFNEMKEKNE 258

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           ++    I G  +K G+Y   +    + N+  +      +R  +F L+SVL A ++L   L
Sbjct: 259 ISWSAMIDGY-IKGGYYKEAL---EVFNVMQREE----IRPRKFVLSSVLAACANLG-AL 309

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
              + IH +   N    D+ + TAL+D+Y + G +  A  +FE  +  ++ TWNAMI G 
Sbjct: 310 DQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGL 369

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSG 522
            +   +  A+ELF  M     R + IT+   + AC    M+ +G ++       Y ++ G
Sbjct: 370 GMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPG 429

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            E   CV    +D+  + G + +A+ +   +P  P    W  ++  C  +G+ +L 
Sbjct: 430 MEHYGCV----VDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELG 481



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 153/359 (42%), Gaps = 23/359 (6%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T  NLP + L+   F  ++ F+S  S      +L    STS   L K  HA  L +    
Sbjct: 3   TTTNLP-YHLASKDFSTENKFTSQLSQKTILDLLNTKSSTSLHHL-KQVHAVALRTGHFQ 60

Query: 87  DRFLTNNLMTMYS--RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
           D +++  L+  Y+     +L +A ++F+ +P+ ++  +N I+     + E       +  
Sbjct: 61  DHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNE-----PCKAI 115

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
             +  +  +    ++ T   L K C ++        VH + +K GL  D  +  A + +Y
Sbjct: 116 CCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMY 175

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
             FG++  A+ +       DV+ +  M+  Y + G  E    LF  +       +D++V 
Sbjct: 176 GSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSM-------EDKNVG 228

Query: 265 CVLGVISDLGK--RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
               ++S + K    EE     A +L       N + W+  + GY++ G    A+E F  
Sbjct: 229 SWNVMVSGMAKCGMIEE-----ARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNV 283

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           M R  ++         LAA A    L+ G+ IH     +      ++G +L++MY+K G
Sbjct: 284 MQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCG 342



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 89/180 (49%), Gaps = 8/180 (4%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N +++  ++CG +  AR LF++M +++ ISW++++  Y   G        E   +F  ++
Sbjct: 231 NVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGY-----YKEALEVFNVMQ 285

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                  +  L+ +L  C + G +     +H Y       +D  +  ALV++Y+K G++ 
Sbjct: 286 REEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLD 345

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A  +F+ M++++V  W  M+     +G  E+   LF  + +    P+  +   +LGV+S
Sbjct: 346 MAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGIT---LLGVLS 402



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 18/203 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    +   L  G+  HA + N+S   D  L   L+ MY++CG L  A  +F+KM  +
Sbjct: 298 SVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKK 357

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ +WN+++        G AE+  E   LF  +++     + +TL  +L  C  SG V  
Sbjct: 358 EVFTWNAMICGLGM--HGRAEDAIE---LFFKMQKQKFRPNGITLLGVLSACAHSGMVDE 412

Query: 178 SETVHG-----YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVM 231
              +       Y ++ G+  + +  G +V++  + G + EA+ +   M  E    +W  +
Sbjct: 413 GLRIFNSMEEVYGIEPGM--EHY--GCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGAL 468

Query: 232 LRAYAENG---FGEEVFHLFVDL 251
           L A  ++G    GE V  + ++L
Sbjct: 469 LGACRKHGDVELGERVGKILLEL 491


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 234/784 (29%), Positives = 366/784 (46%), Gaps = 82/784 (10%)

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           H   +  GL  D      L +  S    I +A  LF  +   D+ L+ V++RA++ N   
Sbjct: 30  HAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSP 89

Query: 242 EEVFHLFVDLHRSG-LCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
                L+  L +S  L PD+ +   V+   S LG        +     ++    S++ + 
Sbjct: 90  SSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS-----IVAGFGSDLFVG 144

Query: 301 NKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           +  ++ Y +      A + F  M+ R  V ++++                    + G   
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTM--------------------VSGLVK 184

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
            S F  A+++   ++          G+  D  T+A+VL   + L + L L   I   A+K
Sbjct: 185 NSCFDEAILIFGDMVK--------GGIGFDSTTVAAVLPGVAEL-QDLALGMGIQCLAMK 235

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
               + ++V T L  +Y + G +  A  LF      DL ++NAMI GY  +N +  ++ L
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           F  +  SGE+++  +I   +        L   + +H +  KSG   +  VS+ +  +Y +
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR 355

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
              +  A+ +F++       +W  MISG   NG  + A+S++ +M+   V P+  T   +
Sbjct: 356 LNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSI 415

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A + L AL  G+ +H  + +    S+ FV  +L+DMYAKCG+I +A  LF  M  +N 
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           V WNAM+ G   HG G E L LF +M    V P  VTF+ VL ACS+ GLV E  E F  
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M   +G EP  EHY+ +VD LGRAG   +A + I  MP E    +  ALLGAC +  D  
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN 595

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------- 831
             +  ++KL  L+P +   YVLLSNI++A   + +  S RG +KR+ + K P        
Sbjct: 596 LARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVA 655

Query: 832 ---------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                          A  I+A +E L  +++E G+  +T   L DVEEEEKE  +  HSE
Sbjct: 656 NTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSE 715

Query: 877 KLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMC 913
           KLA A+GLI++ P + I   K                           ANRFHH +DG+C
Sbjct: 716 KLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGIC 775

Query: 914 PCAD 917
            C D
Sbjct: 776 SCGD 779



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 144/602 (23%), Positives = 252/602 (41%), Gaps = 86/602 (14%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           +S+   F  L + +ST   L    THA+I+ +    D      L    S   ++  A  L
Sbjct: 7   ASTRNLFLTLINRVSTLHQL--NQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLL 64

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF-TSRLTLAPLLKLC 169
           F  +P+ DL  +N ++ A++ +      + +    L+  LR+S        T A ++   
Sbjct: 65  FSTIPNPDLFLYNVLIRAFSLN-----NSPSSAVSLYTHLRKSTPLEPDNFTYAFVIS-- 117

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
             +  +     +H +++  G   D FV  A+V  Y KF ++  A+ +FDGM ERD VLW 
Sbjct: 118 -GASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWN 176

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD------------LGKRH 277
            M+    +N   +E   +F D+ + G+  D  +V  VL  +++            L  + 
Sbjct: 177 TMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKV 236

Query: 278 EEQVQAYAIKLL--LYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECF 320
                AY I  L  LY+                  ++V +N  +SGY    +   ++  F
Sbjct: 237 GFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLF 296

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             ++ S  + +S + +  +       +L+L + IHG   KSG  S   V  +L  +YS++
Sbjct: 297 KELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRL 356

Query: 381 GCV-------------------------------------------CGLRTDQFTLASVL 397
             +                                           C +R +  T+ S+L
Sbjct: 357 NEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSIL 416

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A + L   L L K +H    +    ++ FVSTALID+Y + GS+ EA+ LF      + 
Sbjct: 417 SACAQL-GALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HA 516
            TWNAMI GY L    H+AL LF+ M  S      +T  + + AC    ++++G ++  +
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEED 575
                GFE      + ++D+  + G +  A      +P  P    W  ++  C+ + + +
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN 595

Query: 576 LA 577
           LA
Sbjct: 596 LA 597



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 192/463 (41%), Gaps = 54/463 (11%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           LH   Q H   I N    D    T L        ++ +A  LF      DL  +N +I  
Sbjct: 23  LHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRA 82

Query: 467 YILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           + L+N+   A+ L++H+  S     D  T A  +        L  G  +HA+++ +GF  
Sbjct: 83  FSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISG---ASSLGLGLLLHAHSIVAGFGS 139

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           DL V S I+  Y K   +  A+ +F+ +   D V W TM+SG V N   D A+ I+  M 
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
             G+  D  T A ++   + L  L  G  I    +K+   S  +V   L  +Y+KCG IE
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            A +LF Q+   + V +NAM+ G   +   E +++LF+++   G + +S + +G++    
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIP--- 316

Query: 706 YTGLVSEAYENFHLMREKYGI-------------------------------------EP 728
               V   + + HL R  +G                                      E 
Sbjct: 317 ----VFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSM---PFEASASMHRALLGACRVQGDTETGKWVA 785
            +  ++ ++    + G T++A  L   M       +     ++L AC   G    GKWV 
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVH 432

Query: 786 EKLMALEPFDSSAYV--LLSNIFAAANQWDDVTSARGEMKRKN 826
           + L+  E F+S+ +V   L +++A      +       M  KN
Sbjct: 433 D-LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKN 474


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 237/777 (30%), Positives = 357/777 (45%), Gaps = 169/777 (21%)

Query: 285 AIKLLLYN---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           AI LL  N   ++S+V  WN+ +   L     + A+  F  M   +   D  TF     A
Sbjct: 76  AILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKA 135

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR-----------TDQ 390
                N  LG  IHG  ++ GF S V V N++I+MY K   V   R            D 
Sbjct: 136 CGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDS 195

Query: 391 FTLASVLRASSS--------------------LPE--------------GLHL-SKQIHV 415
            T  S++   S                     LP+              GL L  +Q+H 
Sbjct: 196 VTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHG 255

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             +++  V D FV  AL+D+Y + G M +A  +FE     D+ TWNAM+ GY  +     
Sbjct: 256 FCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFED 315

Query: 476 ALELFSHMHTSGERLDEITIATAV-----------------KACGC-------LLM---- 507
           AL LF  M       D +T ++ +                 + CGC        LM    
Sbjct: 316 ALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLS 375

Query: 508 -------LKQGKQMHAYAMKSGFEL---------DLCVSSGILDMYVKCGAMVDAQSIFN 551
                  L  GK+ H Y++K  F L         DL V + ++DMY KC ++  A+++F+
Sbjct: 376 ACASVGALLHGKETHCYSVK--FILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFD 433

Query: 552 DIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRL--SGVVPDEFTFAILVKASSCLT 607
           +I   D   V WT MI G   +G+ + AL ++ +M    + +VP++FT + ++ A + L 
Sbjct: 434 EICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA 493

Query: 608 ALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
           AL+ G+QIHA +++   +D S   FV   L+DMY+K G+++ A ++F  M  RN V W +
Sbjct: 494 ALKFGKQIHAYVLRRSRID-SDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTS 552

Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
           +L G   HG  E+  ++F++M+   +  D +TF+ VL ACS++G+              +
Sbjct: 553 LLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DF 599

Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV 784
           G++P VEHY+ +VD LGRAGR  EA  LI  MP E +  +  ALL ACR+  + E  ++ 
Sbjct: 600 GVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFA 659

Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------- 831
           A+KL+ L+  +   Y LLSNI+A A +W DV      MKR  +KK P             
Sbjct: 660 AKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMET 719

Query: 832 ----------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARA 881
                     +  I+  +  LIKRIK        +F L DV++EEK   L  HSEKLA A
Sbjct: 720 FYVGDRTHLQSQKIYETLADLIKRIK-------ANFSLHDVDDEEKGDQLSEHSEKLALA 772

Query: 882 YGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
           Y +++ PP + I   K                           ++RFH  ++G C C
Sbjct: 773 YAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSC 829



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 156/634 (24%), Positives = 272/634 (42%), Gaps = 118/634 (18%)

Query: 5   LQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAI 64
           L+ N+ P H   Y          + N P+ +L L   ++  H++    +  +  + +   
Sbjct: 80  LEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPF--VFKACG 137

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLIS 121
             S+  LG S H  ++      + F+ N +++MY +C ++V+AR++FD++  R   D ++
Sbjct: 138 EISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVT 197

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGYVWASET 180
           WNSI++ Y+H    N         LFR +          + +  +L +C   G       
Sbjct: 198 WNSIVSVYSHCFVPNV-----AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQ 252

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           VHG+ ++ GLV D FV  ALV++Y+K GK+ +A  +F+ M+ +DVV W  M+  Y++NG 
Sbjct: 253 VHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGR 312

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLW 300
            E+   LF                         GK  EE+++            S+VV W
Sbjct: 313 FEDALSLF-------------------------GKMREEKIE------------SDVVTW 335

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           +  +SGY Q G    A++ F  M     + + VT +  L+A A    L  G++ H  ++K
Sbjct: 336 SSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVK 395

Query: 361 ---SGFYS----AVIVGNSLINMYSKMGC----------VCGLRTD-------------- 389
               G ++     + V N+LI+MY+K             +C    D              
Sbjct: 396 FILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQH 455

Query: 390 -----------------------QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
                                   FT++ VL A + L   L   KQIH + ++   +   
Sbjct: 456 GDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA-ALKFGKQIHAYVLRRSRIDSD 514

Query: 427 --FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
             FV+  LID+Y ++G +  A+ +F++    +  +W +++ GY +   S  A  +F  M 
Sbjct: 515 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMR 574

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
                LD IT    + AC    M         + +  G E   C    ++D+  + G + 
Sbjct: 575 KEALVLDGITFLVVLYACSHSGM--------DFGVDPGVEHYAC----MVDLLGRAGRLG 622

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +A  + ND+P  P  V W  ++S C  +  E+LA
Sbjct: 623 EAMRLINDMPIEPTPVVWIALLSACRIHSNEELA 656



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 8/319 (2%)

Query: 410 SKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENK---DGFDLATWNAMIF 465
           +K +H   I N  + +S+ + T LI  Y  + S+  A  L E         +  WN +I 
Sbjct: 40  AKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIR 99

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
             +  N+ + AL LF  M T     D  T     KACG +   + G  +H   ++ GFE 
Sbjct: 100 HALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFES 159

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDI---PAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           ++ V + ++ MY KC A+V A+ +F+++      D V W +++S        ++A+S++ 
Sbjct: 160 NVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFR 219

Query: 583 QMRLS-GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
           +M +  G++PD      ++     L     GRQ+H   ++     D FVG +LVDMYAKC
Sbjct: 220 EMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKC 279

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G +EDA  +F++M  ++ V WNAM+ G +Q+G  E+ L LF  M+   +E D VT+  V+
Sbjct: 280 GKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVI 339

Query: 702 SACSYTGLVSEAYENFHLM 720
           S  +  G   EA + F  M
Sbjct: 340 SGYAQRGFGCEAMDVFRQM 358


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/536 (34%), Positives = 283/536 (52%), Gaps = 47/536 (8%)

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S  LI+ Y R G +  A  +F+      L TWNAMI G I    + + L LF  MH  G 
Sbjct: 26  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 85

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             DE T+ +       L  +  G+Q+H Y +K G ELDL V+S +  MY++ G + D + 
Sbjct: 86  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 145

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +   +P  + VAW T+I G   NG  +  L +Y  M++SG  P++ TF  ++ + S L  
Sbjct: 146 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 205

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
             QG+QIHA  IK+  SS   V  SL+ MY+KCG + DA   F + +  + V+W++M+  
Sbjct: 206 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 265

Query: 669 LAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
              HG G+E ++LF  M     +E + V F+ +L ACS++GL  +  E F +M EKYG +
Sbjct: 266 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 325

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P ++HY+ +VD LGRAG   +A  +I SMP +    + + LL AC +  + E  + V ++
Sbjct: 326 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 385

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----------------- 830
           ++ ++P DS+ YVLL+N+ A+A +W DV+  R  M+ KNVKK+                 
Sbjct: 386 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 445

Query: 831 ------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  +  I++ ++ L   +K  GY PDT  VL D++EEEKE  L  HSEKLA A+ L
Sbjct: 446 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 505

Query: 885 ISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +  P  + I                     + N+E      +RFHH  +G C C D
Sbjct: 506 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 561



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 151/324 (46%), Gaps = 36/324 (11%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           +N L+  Y R G LV AR++FD+MPDR L +WN+++A     G    E   EG  LFR +
Sbjct: 26  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA-----GLIQFEFNEEGLSLFREM 80

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                     TL  +         V   + +HGY +K GL  D  V+ +L ++Y + GK+
Sbjct: 81  HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 140

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           ++ + +   M  R++V W  ++   A+NG  E V +L+  +  SG  P+  +   VL   
Sbjct: 141 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC 200

Query: 271 SDLGKRHE-EQVQAYAIK-------------LLLYNN---------------NSNVVLWN 301
           SDL  R + +Q+ A AIK             + +Y+                + + V+W+
Sbjct: 201 SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 260

Query: 302 KKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL- 359
             +S Y   G    AIE F  M  ++N++ + V FL  L A + +   + G ++    + 
Sbjct: 261 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 320

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV 383
           K GF   +     ++++  + GC+
Sbjct: 321 KYGFKPGLKHYTCVVDLLGRAGCL 344



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 5/178 (2%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +G+  H   +      D  + ++L  MY R G L     +   MP R+L++WN+++   A
Sbjct: 107 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 166

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G    E V     L++ ++ S    +++T   +L  C         + +H  A+KIG 
Sbjct: 167 QNG--CPETV---LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 221

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
                V  +L+++YSK G + +A   F   ++ D V+W  M+ AY  +G G+E   LF
Sbjct: 222 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELF 279


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 204/728 (28%), Positives = 359/728 (49%), Gaps = 100/728 (13%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A++L    N ++  +WN  + G+   G    A++ +  M+ S V+ DS T+   + +V G
Sbjct: 79  ALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTG 138

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------------- 384
             +L  G++IH   +K  F S V V NSLI++Y K+GC                      
Sbjct: 139 ISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSM 198

Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
                                  G + D+F+  S L A S +    ++ K++H HA+++ 
Sbjct: 199 ISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSP-NMGKELHCHAVRSR 257

Query: 422 T-VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               D  V T+++D+Y + G ++ AE +F+     ++  WN +I  Y  ++    A   F
Sbjct: 258 IETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCF 317

Query: 481 SHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
             M   +G + D IT+   + AC  L    +G+ +H YAM+ GF   + + + ++DMY +
Sbjct: 318 QKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIVLDTALIDMYGE 373

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
            G +  A+ IF+ I   + ++W ++I+  V NG+   AL ++ ++  S ++PD  T A +
Sbjct: 374 WGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASI 433

Query: 600 VKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT 659
           + A +   +L +GRQIHA ++K    S+  +  SLV MYA CG++EDA   F  + +++ 
Sbjct: 434 LPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDV 493

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           V WN++++  A HG G  ++ LF +M A  V+P+  TF  +L+ACS +G+V E +E F  
Sbjct: 494 VSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFES 553

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           M+ +YGI+P +EHY +++D +GR G    A   I  MPF  +A +  +LL A R   D  
Sbjct: 554 MKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDIT 613

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-DLIFAK 838
             ++ AE++  +E  ++  YVLL N++A A +W+DV   +  M+ K + +  +   + AK
Sbjct: 614 VAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAK 673

Query: 839 VEGLIKRIKEGGYVPDTD-FVLLDV------EEEEKERALYY------------------ 873
            +  +    +  +V     + +LD+      EEEE++  ++Y                  
Sbjct: 674 SKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLAKSRSNSPR 733

Query: 874 -HSEKLARAYGLISTPPSSVI---------------------LSNKEPLYANR--FHHLR 909
            HS +LA  +GLIST     +                     ++ +E +  +   FHH  
Sbjct: 734 RHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSKIFHHFS 793

Query: 910 DGMCPCAD 917
           +G C C +
Sbjct: 794 NGRCSCGN 801



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/555 (21%), Positives = 242/555 (43%), Gaps = 107/555 (19%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++     S L  GK  HA ++    + D ++ N+L+++Y + G    A ++F++MP+RD
Sbjct: 132 VIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERD 191

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF---TSRLTLAPLLKLCLSSGYV 175
           ++SWNS+++ Y          + +GFR     +E + F     R +    L  C      
Sbjct: 192 IVSWNSMISGYL--------ALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSP 243

Query: 176 WASETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
              + +H +A++  +   D  V  +++++YSK+G++  A+ +F  + +R++V W V++  
Sbjct: 244 NMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGC 303

Query: 235 YAENGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK------ 287
           YA N    + F  F  +  ++GL PD  ++  +L   + L  R    +  YA++      
Sbjct: 304 YARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGR---TIHGYAMRRGFLPH 360

Query: 288 -------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                  + +Y                   N++ WN  ++ Y+Q G N+ A+E F  +  
Sbjct: 361 IVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWD 420

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           S++  DS T    L A A + +L+ G+QIH   +KS + S  I+ NSL++MY+    +CG
Sbjct: 421 SSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYA----MCG 476

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
                                L  +++   H +  D V                      
Sbjct: 477 --------------------DLEDARKCFNHVLLKDVV---------------------- 494

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
                        +WN++I  Y +      ++ LFS M  S    ++ T A+ + AC   
Sbjct: 495 -------------SWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSIS 541

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
            M+ +G + +  +MK  + +D  +     +LD+  + G    A+    ++P  P    W 
Sbjct: 542 GMVDEGWE-YFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWG 600

Query: 563 TMISGCVDNGEEDLA 577
           ++++   ++ +  +A
Sbjct: 601 SLLNASRNHNDITVA 615



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 154/319 (48%), Gaps = 23/319 (7%)

Query: 25  KDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSS- 83
           +D +R+L  F   L    +   FS+ S+         H  S +   +GK  H   + S  
Sbjct: 206 EDGFRSLMLFKEMLKFGFKPDRFSTMSA----LGACSHVYSPN---MGKELHCHAVRSRI 258

Query: 84  QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEG 143
           +  D  +  +++ MYS+ G + YA R+F  +  R++++WN ++  YA +       VT+ 
Sbjct: 259 ETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR-----VTDA 313

Query: 144 FRLFRSLRESITFTSR-LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
           F  F+ + E        +TL  LL  C     +    T+HGYA++ G +    +  AL++
Sbjct: 314 FLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTALID 369

Query: 203 IYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
           +Y ++G+++ A+ +FD + E++++ W  ++ AY +NG       LF  L  S L PD  +
Sbjct: 370 MYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTT 429

Query: 263 VQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFV 321
           +  +L   ++ L      Q+ AY +K       SN ++ N  +  Y   GD   A +CF 
Sbjct: 430 IASILPAYAESLSLSEGRQIHAYIVK---SRYGSNTIILNSLVHMYAMCGDLEDARKCFN 486

Query: 322 N-MIRSNVQYDSVTFLVAL 339
           + +++  V ++S+    A+
Sbjct: 487 HVLLKDVVSWNSIIMAYAV 505



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL     +  L  G+  HA I+ S    +  + N+L+ MY+ CG L  AR+ F+ +  +
Sbjct: 432 SILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLK 491

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D++SWNSI+ AYA  G G          LF  +  S    ++ T A LL  C  SG V
Sbjct: 492 DVVSWNSIIMAYAVHGFGRISVC-----LFSEMIASKVDPNKSTFASLLAACSISGMV 544


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/536 (34%), Positives = 283/536 (52%), Gaps = 47/536 (8%)

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S  LI+ Y R G +  A  +F+      L TWNAMI G I    + + L LF  MH  G 
Sbjct: 28  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             DE T+ +       L  +  G+Q+H Y +K G ELDL V+S +  MY++ G + D + 
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +   +P  + VAW T+I G   NG  +  L +Y  M++SG  P++ TF  ++ + S L  
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
             QG+QIHA  IK+  SS   V  SL+ MY+KCG + DA   F + +  + V+W++M+  
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267

Query: 669 LAQHGNGEETLKLFEDMKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
              HG G+E ++LF  M     +E + V F+ +L ACS++GL  +  E F +M EKYG +
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P ++HY+ +VD LGRAG   +A  +I SMP +    + + LL AC +  + E  + V ++
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD----------------- 830
           ++ ++P DS+ YVLL+N+ A+A +W DV+  R  M+ KNVKK+                 
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447

Query: 831 ------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                  +  I++ ++ L   +K  GY PDT  VL D++EEEKE  L  HSEKLA A+ L
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 507

Query: 885 ISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +  P  + I                     + N+E      +RFHH  +G C C D
Sbjct: 508 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 563



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 151/324 (46%), Gaps = 36/324 (11%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           +N L+  Y R G LV AR++FD+MPDR L +WN+++A     G    E   EG  LFR +
Sbjct: 28  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA-----GLIQFEFNEEGLSLFREM 82

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                     TL  +         V   + +HGY +K GL  D  V+ +L ++Y + GK+
Sbjct: 83  HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 142

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
           ++ + +   M  R++V W  ++   A+NG  E V +L+  +  SG  P+  +   VL   
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC 202

Query: 271 SDLGKRHE-EQVQAYAIK-------------LLLYNN---------------NSNVVLWN 301
           SDL  R + +Q+ A AIK             + +Y+                + + V+W+
Sbjct: 203 SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 262

Query: 302 KKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL- 359
             +S Y   G    AIE F  M  ++N++ + V FL  L A + +   + G ++    + 
Sbjct: 263 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV 383
           K GF   +     ++++  + GC+
Sbjct: 323 KYGFKPGLKHYTCVVDLLGRAGCL 346



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 31/203 (15%)

Query: 534 LDMYVKCG-------------------------------AMVDAQSIFNDIPAPDDVAWT 562
           + MY K G                                +V+A+ +F+++P      W 
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            MI+G +     +  LS++ +M   G  PDE+T   +   S+ L ++  G+QIH   IK 
Sbjct: 61  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               D  V  SL  MY + G ++D  I+ + M +RN V WN +++G AQ+G  E  L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180

Query: 683 EDMKAHGVEPDSVTFIGVLSACS 705
           + MK  G  P+ +TF+ VLS+CS
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCS 203



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 5/178 (2%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +G+  H   +      D  + ++L  MY R G L     +   MP R+L++WN+++   A
Sbjct: 109 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 168

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G    E V     L++ ++ S    +++T   +L  C         + +H  A+KIG 
Sbjct: 169 QNG--CPETV---LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 223

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
                V  +L+++YSK G + +A   F   ++ D V+W  M+ AY  +G G+E   LF
Sbjct: 224 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELF 281


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 195/583 (33%), Positives = 300/583 (51%), Gaps = 55/583 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G R + FT    L++ ++L   + L  Q H    K   V + FV T LI +YC+   +  
Sbjct: 44  GDRPNAFTFPFALKSCAALSLPI-LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDN 102

Query: 445 AEYLFE-NKDGFDLAT-WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           A  +FE N     L   +NA++ GY+ ++   +A+ LF  M+  G  ++ +T+   + AC
Sbjct: 103 ARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPAC 162

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
              + L+ G  +H   +K GF+ D+ V +  + MY+KCG++  AQ +F+++P    ++W 
Sbjct: 163 VSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWN 222

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            M+SG   NG     L +Y  M ++GV PD  T   ++ + + L A   G ++   +   
Sbjct: 223 AMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQAS 282

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             +S+PF+  +L++MYA+CGN+  A  +F  M  R  V W A++ G   HG+GE  ++LF
Sbjct: 283 GFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLF 342

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           ++M   G+EPD   F+ VLSACS+ GL  +  E F +M+  Y +EP  EHYS +VD LGR
Sbjct: 343 KEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGR 402

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AGR KEA  LI SMP +   ++  ALLGAC++  + E  +   E+++ LEP +   YVLL
Sbjct: 403 AGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLL 462

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKV 839
           SNI++ AN    V   R  MK K +KKDP                       +D I+  +
Sbjct: 463 SNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 522

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKE--RALYYHSEKLARAYGLISTPPSS--VILS 895
           E L   I +    P+ D    + EE  K+    +  HSEKLA A+GL++T   +  VI+ 
Sbjct: 523 EELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIK 578

Query: 896 NKEPLY---------------------ANRFHHLRDGMCPCAD 917
           N                          A RFHH R+G C C D
Sbjct: 579 NLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKD 621



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 182/377 (48%), Gaps = 12/377 (3%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL L+  M   G+R +  T   A+K+C  L +   G Q H    K G   +  V +G++
Sbjct: 32  QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91

Query: 535 DMYVKCGAMVD-AQSIF--NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            MY K G++VD A+ +F  N       V +  ++SG V N +   A+ ++ QM   GV  
Sbjct: 92  SMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  T   L+ A      LE G  +H + +K    SD  V    + MY KCG++  A  LF
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M ++  + WNAM+ G AQ+G     L+L+ +M  +GV PD VT +GVLS+C+  G  S
Sbjct: 211 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 270

Query: 712 EAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
             +E  F +    +   P + +   L++   R G   +A  +   MP E +     A++G
Sbjct: 271 VGHEVEFKIQASGFTSNPFLNNA--LINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIG 327

Query: 771 ACRVQGDTETGKWVAEKLM--ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
              + G  E    + ++++   +EP D +A+V + +  + A   D        MKR N +
Sbjct: 328 GYGMHGHGEIAVQLFKEMIRSGIEP-DGTAFVCVLSACSHAGLTDQGLEYFKMMKR-NYQ 385

Query: 829 KDPADLIFAKVEGLIKR 845
            +P    ++ +  L+ R
Sbjct: 386 LEPGPEHYSCMVDLLGR 402



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 196/451 (43%), Gaps = 52/451 (11%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN +L    +      A+  +  M+R   + ++ TF  AL + A      LG Q HG   
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 360 KSGFYSAVIVGNSLINMYSKMG------------------CVC----------------- 384
           K G      V   LI+MY K                     VC                 
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 385 ----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G+  +  TL  ++ A  S P  L L   +H   +K    +D  V    I 
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVS-PINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+  A+ LF+      L +WNAM+ GY  +  +   LEL+ +M  +G   D +T
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +   + +C  L     G ++      SGF  +  +++ +++MY +CG +  AQ++F+ +P
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+WT +I G   +G  ++A+ ++ +M  SG+ PD   F  ++ A S     +QG +
Sbjct: 316 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375

Query: 615 IHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQ 671
            +  ++K +   +P       +VD+  + G +++A  L + M ++ +  +W A+L     
Sbjct: 376 -YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           H N E     FE  +   +EP+++ +  +LS
Sbjct: 435 HKNVELAELAFE--RVIELEPENIGYYVLLS 463



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 11/243 (4%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           S ++L F Q +      +S     ++   +S  +L LG S H   L      D  + N  
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 193

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           +TMY +CGS+ YA++LFD+MP + LISWN++++ YA +G   A NV E   L+R++  + 
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGL--ATNVLE---LYRNMDMNG 248

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI---GLVWDEFVSGALVNIYSKFGKIR 211
                +TL  +L  C + G   A    H    KI   G   + F++ AL+N+Y++ G + 
Sbjct: 249 VHPDPVTLVGVLSSCANLG---AQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLT 305

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
           +A+ +FDGM ER +V W  ++  Y  +G GE    LF ++ RSG+ PD  +  CVL   S
Sbjct: 306 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 365

Query: 272 DLG 274
             G
Sbjct: 366 HAG 368



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 38/316 (12%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV-YARRLFDK-MPDR 117
           L+   + S  +LG   H +I     + + F+   L++MY + GSLV  AR++F++    R
Sbjct: 56  LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSR 114

Query: 118 DL-ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            L + +N++++ Y  + +      +E   LFR + E     + +TL  L+  C+S   + 
Sbjct: 115 KLTVCYNALVSGYVSNSK-----CSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLE 169

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
              ++H   LK G   D  V    + +Y K G +  A+ LFD M  + ++ W  M+  YA
Sbjct: 170 LGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYA 229

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-----EEQVQAYAIKLLLY 291
           +NG    V  L+ ++  +G+ PD  ++  VL   ++LG +      E ++QA       +
Sbjct: 230 QNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPF 289

Query: 292 NNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
            NN+                         +V W   + GY   G    A++ F  MIRS 
Sbjct: 290 LNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG 349

Query: 328 VQYDSVTFLVALAAVA 343
           ++ D   F+  L+A +
Sbjct: 350 IEPDGTAFVCVLSACS 365



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 3/212 (1%)

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W T +       +   ALS+Y QM   G  P+ FTF   +K+ + L+    G Q H  + 
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ--MDMRNTVLWNAMLVGLAQHGNGEET 678
           K+ C  +PFV   L+ MY K   +++A  +F++     + TV +NA++ G   +    E 
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           + LF  M   GV  +SVT +G++ AC  + +  E   + H    KYG + +V   +  + 
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPAC-VSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              + G    A +L   MP +   S +  + G
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 227



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 99/470 (21%), Positives = 173/470 (36%), Gaps = 98/470 (20%)

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERD 224
           LK C +          HG   K+G V++ FV   L+++Y K   +  A+ +F+     R 
Sbjct: 56  LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRK 115

Query: 225 V-VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKR-H 277
           + V +  ++  Y  N    E   LF  ++  G+  +  ++      CV  +  +LG   H
Sbjct: 116 LTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLH 175

Query: 278 EEQVQ-----------------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
              ++                        YA KL        ++ WN  +SGY Q G   
Sbjct: 176 CSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLAT 235

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
             +E + NM  + V  D VT +  L++ A     ++G ++      SGF S   + N+LI
Sbjct: 236 NVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALI 295

Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALI 433
           NMY++ G           L         +PE                    + VS TA+I
Sbjct: 296 NMYARCG----------NLTKAQAVFDGMPE-------------------RTLVSWTAII 326

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
             Y  +G    A  LF+                                M  SG   D  
Sbjct: 327 GGYGMHGHGEIAVQLFK-------------------------------EMIRSGIEPDGT 355

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFN 551
                + AC    +  QG + +   MK  ++L+      S ++D+  + G + +AQ++  
Sbjct: 356 AFVCVLSACSHAGLTDQGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIE 414

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
            +P  PD   W  ++  C  +   +LA   +   R+  + P+   + +L+
Sbjct: 415 SMPIKPDGAVWGALLGACKIHKNVELAELAFE--RVIELEPENIGYYVLL 462


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/549 (33%), Positives = 291/549 (53%), Gaps = 55/549 (10%)

Query: 424  ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
             D FVS+ALID+Y + G + +A  LF+     ++ +W +MI GY+ +  +  AL LF   
Sbjct: 2048 TDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDF 2107

Query: 484  ---HTSGE-----RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
                T  E      LD + + + + AC  +      + +H + +K GF+  + V + ++D
Sbjct: 2108 LEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMD 2167

Query: 536  MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEF 594
             Y KCG  + ++ +F+ +   DD++W +MI+    +G    AL ++H M R  GV  +  
Sbjct: 2168 AYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAV 2227

Query: 595  TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
            T + ++ A +   AL  G+ IH  +IK+D   +  VG S++DMY KCG +E A   F +M
Sbjct: 2228 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287

Query: 655  DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
              +N   W AM+ G   HG  +E L +F  M   GV+P+ +TF+ VL+ACS+ GLV E +
Sbjct: 2288 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 2347

Query: 715  ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
              F+ M+ KY IEP +EHY  +VD  GRAG   EA  LI  M  +    +  +LLGACR+
Sbjct: 2348 HWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRI 2407

Query: 775  QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-- 832
              + + G+  A+KL  L+P +   YVLLSN++A A +W DV   R  MK + + K P   
Sbjct: 2408 HKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFS 2467

Query: 833  ---------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL 871
                                 ++I+  +E L   +++ GYVP+   VL DV+EEEKE  L
Sbjct: 2468 LVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIIL 2527

Query: 872  YYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHL 908
              HSEKLA A+G++++ P + I                     L +++ +   + RFHH 
Sbjct: 2528 RVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHF 2587

Query: 909  RDGMCPCAD 917
            +DG+C C D
Sbjct: 2588 KDGVCSCGD 2596



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 198/392 (50%), Gaps = 40/392 (10%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +QIH   I++    D  ++  LI +Y  +G +A A  LF         TWN +I    ++
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             S +AL L+ +M   G   D+ T    +KAC   L +  GK +H   +K GF  D+ V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 531 SGILDMYVKCGA-------------------------------MVDAQSIFNDIPAPDDV 559
           + ++D Y KCG                                + +A+ IF++IP+ + V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT MI+G + N + + AL ++ +M+   + P+E+T   L+KA + +  L  GR IH   
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           IK       ++G +L+DMY+KCG+I+DA  +F+ M  ++   WN+M+  L  HG G+E L
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF +M+   V+PD++TFIGVL AC +   V E    F  M + YGI P  EHY  + + 
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 740 LGRAGR-------TKEAGELI--LSMPFEASA 762
             R+         TKE G L    S+ F+A A
Sbjct: 404 YARSNNLDEAFKSTKEVGSLANSPSICFDARA 435



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 211/473 (44%), Gaps = 71/473 (15%)

Query: 291  YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
            Y + SNV  WN  ++   + GD+  A+  F ++ +  +     +F   + + +   +L  
Sbjct: 1974 YVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVS 2033

Query: 351  GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------------- 388
            G+  H      GF + + V ++LI+MYSK G +   R                       
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093

Query: 389  -----------------------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIK 419
                                         D   + SVL A S +  G  +++ +H   +K
Sbjct: 2094 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV-SGKGITEGVHGFVVK 2152

Query: 420  NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                    V   L+D Y + G    ++ +F+  +  D  +WN+MI  Y  S  S +ALE+
Sbjct: 2153 KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEV 2212

Query: 480  FSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            F  M    G R + +T++  + AC     L+ GK +H   +K   E ++CV + I+DMY 
Sbjct: 2213 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 2272

Query: 539  KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
            KCG +  A+  F+ +   +  +WT M++G   +G    AL I+++M  +GV P+  TF  
Sbjct: 2273 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 2332

Query: 599  LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQM 654
            ++ A S    +E+G     N +K     +P  GI     +VD++ + G + +AY L K+M
Sbjct: 2333 VLAACSHAGLVEEGWHWF-NAMKHKYDIEP--GIEHYGCMVDLFGRAGCLNEAYNLIKRM 2389

Query: 655  DMR-NTVLWNAMLVGLAQHGN---GE-ETLKLFEDMKAHGVEPDSVTFIGVLS 702
             M+ + V+W ++L     H N   GE    KLFE      ++PD+  +  +LS
Sbjct: 2390 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE------LDPDNCGYYVLLS 2436



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 32/281 (11%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            K  +Q+HA  ++SG   D  ++  ++ +Y   G +  A  +F  I  P    W  +I  
Sbjct: 40  FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              NG  + AL +Y  M   G+  D+FTF  ++KA +   +++ G+ +H +LIK   S D
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD 159

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG-------------- 673
            FV  +L+D Y KCG+   A  +F++M +RN V W  ++ GL   G              
Sbjct: 160 VFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS 219

Query: 674 ----------NG-------EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
                     NG       EE L+LF+ M+A  + P+  T + ++ AC+  G+++     
Sbjct: 220 KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RG 278

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            H    K  IE  V   + L+D   + G  K+A E+  +MP
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 182/413 (44%), Gaps = 42/413 (10%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H   ++ GL  D+ ++  L+++YS  G+I  A  LF  +Q      W +++RA   NG 
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNNS 295
            E+   L+ ++   G+  D  +   V+   +     DLGK     V    IK   Y  + 
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK----VVHGSLIK---YGFSG 158

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V + N  +  Y + G    A++ F  M   NV    V++   ++ +    +L   ++I 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV----VSWTTVISGLISCGDLQEARRIF 214

Query: 356 GTTLKSGF--YSAVIVG-------NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
                     ++A+I G          + ++ +M     +  +++T+ S+++A + +   
Sbjct: 215 DEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-NIFPNEYTMVSLIKACTEMGI- 272

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L L + IH +AIKN      ++ TALID+Y + GS+ +A  +FE      L TWN+MI  
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKAC--------GCLLMLKQGKQMHAYA 518
             +     +AL LFS M     + D IT    + AC        GC    +  +      
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392

Query: 519 MKSGFE--LDLCVSSGILDMYVK----CGAMVDAQSIFNDIPAPDDVAWTTMI 565
           +   +E   +L   S  LD   K     G++ ++ SI  D  A   VAWT ++
Sbjct: 393 IPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARA-KQVAWTQLL 444



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 139/316 (43%), Gaps = 47/316 (14%)

Query: 68   DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
            DL+ G+ +H +        D F+++ L+ MYS+CG L  AR LFD++P R+++SW S++ 
Sbjct: 2030 DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMIT 2089

Query: 128  AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPL--------LKLCLSSGYVWASE 179
             Y  +     E       LF+   E  T        PL        L  C        +E
Sbjct: 2090 GYVQN-----EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 2144

Query: 180  TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
             VHG+ +K G      V   L++ Y+K G+   +K +FD M+E+D + W  M+  YA++G
Sbjct: 2145 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204

Query: 240  F-GE--EVFH------------------LFVDLH----RSGLCPDDESVQ-------CVL 267
              GE  EVFH                  L    H    R+G C  D+ ++       CV 
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264

Query: 268  GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
              I D+  +        A K        NV  W   ++GY   G    A++ F  M+R+ 
Sbjct: 2265 TSIIDMYCKCGR--VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG 2322

Query: 328  VQYDSVTFLVALAAVA 343
            V+ + +TF+  LAA +
Sbjct: 2323 VKPNYITFVSVLAACS 2338



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 6/184 (3%)

Query: 92   NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG-EGNAENVTEGFRLFRSL 150
            N LM  Y++CG  + ++++FD M ++D ISWNS++A YA SG  G A  V  G      +
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM-----V 2217

Query: 151  RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
            R      + +TL+ +L  C  +G + A + +H   +K+ L ++  V  +++++Y K G++
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277

Query: 211  REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
              AK  FD M+E++V  W  M+  Y  +G  +E   +F  + R+G+ P+  +   VL   
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337

Query: 271  SDLG 274
            S  G
Sbjct: 2338 SHAG 2341



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 43/301 (14%)

Query: 121  SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
            SWNS++A  A  G+       E  R F SLR+     +R +    +K C +   + +   
Sbjct: 1982 SWNSVIADLARGGDS-----VEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 2036

Query: 181  VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
             H  A   G   D FVS AL+++YSK G++++A+ LFD +  R+VV W  M+  Y +N  
Sbjct: 2037 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 2096

Query: 241  GEEVFHLFVD-------LHRSGLCPDDESVQC-VLGVISDL-GKRHEEQVQAYAI----- 286
             +    LF D       +      P D  V   VL   S + GK   E V  + +     
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156

Query: 287  -----------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
                                   K+  +    + + WN  ++ Y Q G +  A+E F  M
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216

Query: 324  IRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
            +R   V+Y++VT    L A A    L  G+ IH   +K      V VG S+I+MY K G 
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276

Query: 383  V 383
            V
Sbjct: 2277 V 2277



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 26/215 (12%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H  ++      D F+ NNL+  Y +CG   +A ++F+KM  R+++SW ++++   
Sbjct: 143 LGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI 202

Query: 131 HSG----------EGNAENVT----------------EGFRLFRSLRESITFTSRLTLAP 164
             G          E  ++NV                 E   LF+ ++    F +  T+  
Sbjct: 203 SCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           L+K C   G +     +H YA+K  +    ++  AL+++YSK G I++A  +F+ M  + 
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +  W  M+ +   +G G+E  +LF ++ R  + PD
Sbjct: 323 LPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPD 357



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 46/311 (14%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA+I+ S    D+ LT  L+ +YS  G + YA  LF ++ +    +WN I+ A   +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G        +   L++++        + T   ++K C +   +   + VHG  +K G   
Sbjct: 104 GLSE-----QALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D FV   L++ Y K G  R A  +F+ M+ R+VV W  ++      G  +E   +F ++ 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI- 217

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                                                    + NVV W   ++GY++   
Sbjct: 218 ----------------------------------------PSKNVVSWTAMINGYIRNQQ 237

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              A+E F  M   N+  +  T +  + A      L LG+ IH   +K+     V +G +
Sbjct: 238 PEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTA 297

Query: 373 LINMYSKMGCV 383
           LI+MYSK G +
Sbjct: 298 LIDMYSKCGSI 308


>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
 gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
          Length = 921

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 233/841 (27%), Positives = 388/841 (46%), Gaps = 100/841 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSS-QI-PDRFLTNNLMTMYSRCGSLVYARR 109
           SS  + S+L    S  DL  GK+ H +I  SS QI  D  L N+L+TMY +CGSL  A R
Sbjct: 96  SSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAER 155

Query: 110 LFDKMPDRDLISWNSILAAYAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           +F  +  ++  SW +++ AYA +G E  A  V         + E       +T A +L  
Sbjct: 156 VFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDM-----MSEGRVEPDPITYAGVLTA 210

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C + G +     +H      G V    VS  L+++Y K+G   +A  +F+ +++RDVV+W
Sbjct: 211 CSTLGDLETGMRIHALIRSKG-VESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIW 269

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQA 283
              + A   +G       LF  +   GL  ++ +   +L   S+L     GK  E+++  
Sbjct: 270 TAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYT 329

Query: 284 YAIK---------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIEC 319
             ++         L L+                 +  VV W   ++ Y Q G +  A+E 
Sbjct: 330 LGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALEL 389

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           +  M   +++ D +     L A +   NL  G+ +H       F  +++V   L++MY K
Sbjct: 390 YHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVK 446

Query: 380 MGCVC-------------------------------------------GLRTDQFTLASV 396
            G +                                            G+  +  T  +V
Sbjct: 447 CGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTV 506

Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           + A S L   L   + +H   +    ++D FV  AL+ +Y + G +  A  +F++     
Sbjct: 507 IDACSRL-SSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKR 565

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
             +W  M+     + +SH+ALE++S +H  G R      + A+ +C  L  + + + +H 
Sbjct: 566 YPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHG 625

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
               S F  DL +S+ ++++Y KCG + +A+ +F+ +   ++V+WTTMI G   NG    
Sbjct: 626 VIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAE 685

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL +Y  M    V P+   F  ++ + + L AL +G+++HA L      ++  +  +LV+
Sbjct: 686 ALELYKAM---DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVN 742

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCG +  A   F      +   WN+M    AQ G+G + L+L+ +M   GV+P+ +T
Sbjct: 743 MYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGIT 802

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI--- 753
            + VL ACS+ G++ E    F  M   +GI P  EHYS + D LGR+GR +EA +++   
Sbjct: 803 LLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMA 862

Query: 754 -------LSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
                   + P   SA M  + LGAC+   D       AEKL  L+P DS+ YVLLS  +
Sbjct: 863 SGESGSEAASPVAVSAWM--SFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQTY 920

Query: 807 A 807
           +
Sbjct: 921 S 921



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 167/635 (26%), Positives = 282/635 (44%), Gaps = 90/635 (14%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  +  AL+N+Y+K G + E++ +F+ M+ R V  W  M+ AY ++ F +E    F    
Sbjct: 33  DTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF---R 89

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKL----LLYNN---------- 293
           R    P   +   VLG        + GK    Q+ A + ++    +L N+          
Sbjct: 90  RMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGS 149

Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALA 340
                         N   W   ++ Y Q G    AIE F +M+    V+ D +T+   L 
Sbjct: 150 LEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLT 209

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------- 381
           A +   +L  G +IH      G  SA +V   LI++Y K G                   
Sbjct: 210 ACSTLGDLETGMRIHALIRSKGVESA-MVSTGLIDLYGKWGFFEDALQVFESVRDRDVVI 268

Query: 382 -------CVC-----------------GLRTDQFTLASVLRASSSLPE---GLHLSKQIH 414
                  CV                  GL+ +  T + +L A S+L +   G  +  +I+
Sbjct: 269 WTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIY 328

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
              ++ D V    +   ++ ++ R GS+     +F+      + TW  MI  Y     S 
Sbjct: 329 TLGLEYDDV----LQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSM 384

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +ALEL+   H      D+I ++  ++AC  L  L+QG+ +H+      FE  L V + ++
Sbjct: 385 EALELY---HCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLV 441

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
           DMYVKCG + +A+  F+   A D ++WT++I+          AL ++H M L GV P+  
Sbjct: 442 DMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSI 501

Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
           TF  ++ A S L++L  GR +H+ ++     SD FVG +LV MY+K G ++ A ++F  +
Sbjct: 502 TFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSI 561

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
            ++    W  MLV L Q+G+  E L+++  +   G  P S  F   L +C+    VS A 
Sbjct: 562 PVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRA- 620

Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
              H + +     P++   + L++   + G  +EA
Sbjct: 621 RAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEA 655



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 11/329 (3%)

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T A  + AC  L  +++GK++H    +S   +D  + + +L++Y KCG + +++ IF  +
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
                  W TMI+  V +     AL  + +M      P   TF  ++ A      LE G+
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117

Query: 614 QIHANL--IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
            IH  +        +D  +  SLV MY KCG++EDA  +F  +  +N   W AM+   AQ
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177

Query: 672 HGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
           +G     +++F DM + G VEPD +T+ GVL+ACS  G +        L+R K G+E  +
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSK-GVESAM 236

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
              + L+D  G+ G  ++A ++  S+  +    +  A + AC   G +     +  K+ A
Sbjct: 237 VS-TGLIDLYGKWGFFEDALQVFESVR-DRDVVIWTAFIAACVYHGQSGFALELFRKMEA 294

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
            E   ++  V  S I AA +  +D  + +
Sbjct: 295 -EGLQANN-VTFSKILAACSNLEDFETGK 321



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 24/274 (8%)

Query: 18  VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSS-------------SSSSQWFSILRHAI 64
           V+F S     Y   PS+ + L+   Q  H   +               S  + + L    
Sbjct: 556 VVFDSIPVKRY---PSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCT 612

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
           +  D+   ++ H  I +S   PD  L+N LM +Y++CG L  AR +FD+M +++ +SW +
Sbjct: 613 ALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTT 672

Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           ++  YA +G        E   L++++     F   +   P++  C   G +   + VH  
Sbjct: 673 MIGGYAQNG-----RPAEALELYKAMDVQPNF---IAFVPVISSCADLGALVEGQRVHAR 724

Query: 185 ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
               GL  +E +  ALVN+Y+K GK+  A+  FD     D   W  M  AYA+ G G +V
Sbjct: 725 LSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQV 784

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
             L+ ++   G+ P+  ++  VL   S +G   E
Sbjct: 785 LELYREMCLQGVQPNGITLLSVLVACSHMGMLEE 818


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 206/645 (31%), Positives = 301/645 (46%), Gaps = 120/645 (18%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D   L S L++  + P    L++ +H  A+ +    D FV+++L+  Y R G+   A  +
Sbjct: 19  DPHLLPSALKSCPAQP----LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT-------------------SGER 489
           F+     ++  W+A+I GY    ++  A  L   M +                   SG  
Sbjct: 75  FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134

Query: 490 LDEIT----------------IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           LD +T                ++ A+ A G +  +  GKQ+H Y +K+G  LD CV + +
Sbjct: 135 LDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTAL 194

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD----------------------------------- 558
           +DMY KCG   +   +F++    D                                    
Sbjct: 195 IDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNV 254

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
           V+WT++++ CV NG +  A+ ++  M+  GV P+  T   ++ A + + AL  GR  H  
Sbjct: 255 VSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCF 314

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
            ++     D +VG +LVDMYAKCG    A  +F  M  RN V WNAM+ G A HG+    
Sbjct: 315 SLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANA 374

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           ++LF  M+    +PD VTF  VL ACS  GL  E    F+ M++ +GI P +EHY+ +V 
Sbjct: 375 VQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVT 434

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            LGR+G+  EA +LI  MPFE  + +  +LLG+CRV G+    +  AEKL  LEP ++  
Sbjct: 435 LLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGN 494

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLI 835
           YVLLSNI+A+   WD V   R EMK   +KK+                           I
Sbjct: 495 YVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAI 554

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILS 895
             K+  L   +   G+ P  DFVL DVEE+EK+  L  HSEKLA A GLIST P + +  
Sbjct: 555 TEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRV 614

Query: 896 NK---------EPLY--------------ANRFHHLRDGMCPCAD 917
            K         E +                NRFHH +DG C C D
Sbjct: 615 IKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGD 659



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 233/537 (43%), Gaps = 78/537 (14%)

Query: 146 LFRSLRESITFTSRLTLAP-LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
           L+  LR  ++F     L P  LK C +      +  +H  A+  GL  D FV+ +L++ Y
Sbjct: 7   LYHFLRH-VSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSY 62

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            + G    A+ +FD M E++VV W  ++  Y+  G  E  + L   +  +G+ P      
Sbjct: 63  IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEP------ 116

Query: 265 CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                          NV+ WN  +SG  + G    A+   V M 
Sbjct: 117 -------------------------------NVITWNGLVSGLNRSGRALDAVTALVRMH 145

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
                 D+     AL+AV     +++G+Q+HG  +K+G      V  +LI+MY K G   
Sbjct: 146 SEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCG--- 202

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
             R D+  +  V   SS +                     D     AL+    RN  ++E
Sbjct: 203 --RADE--IVRVFHESSHM---------------------DVASCNALVAGLSRNAQVSE 237

Query: 445 AEYLFE----NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
           A  LF          ++ +W +++   + +    +A++LF  M + G   + +TI   + 
Sbjct: 238 ALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLP 297

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           A   +  L  G+  H ++++ GF  D+ V S ++DMY KCG    A++IF+ +P+ + V+
Sbjct: 298 AFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVS 357

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  MI G   +G+   A+ ++  M+     PD  TF  ++ A S     E+GR+ + N +
Sbjct: 358 WNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR-YFNEM 416

Query: 621 KLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           +      P +     +V +  + G +++AY L  +M    ++ +W ++L     +GN
Sbjct: 417 QQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 116/535 (21%), Positives = 201/535 (37%), Gaps = 138/535 (25%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           L ++ HA  + S    D F+ ++L+  Y R G+   AR +FD+MP+++++ W++++A Y+
Sbjct: 35  LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYS 94

Query: 131 HSGEGNAE-NVTEGFR-----------------LFRSLR--ESITFTSRL------TLAP 164
             G+  A   + E  R                 L RS R  +++T   R+        A 
Sbjct: 95  ARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDAT 154

Query: 165 LLKLCLSS----GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
            +   LS+      V   + VHGY +K G   D  V  AL+++Y K G+  E   +F   
Sbjct: 155 GVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHES 214

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
              DV     ++   + N    E   LF    R  +C   E                   
Sbjct: 215 SHMDVASCNALVAGLSRNAQVSEALLLF----REFICRGVE------------------- 251

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                          NVV W   ++  +Q G +  A++ F  M    V+ +SVT    L 
Sbjct: 252 --------------LNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLP 297

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           A A    L  G+  H  +L+ GF   V VG++L++MY+K G                   
Sbjct: 298 AFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCG------------------- 338

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
                     K  H   I +   + + VS  A+I  Y  +G  A                
Sbjct: 339 ----------KARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAA---------------- 372

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----M 514
                           A++LF  M    ++ D +T    + AC    + ++G++      
Sbjct: 373 ---------------NAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQ 417

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
             + +    E   C    ++ +  + G + +A  + N++P  PD   W +++  C
Sbjct: 418 QGHGISPRMEHYAC----MVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSC 468



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 4/163 (2%)

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
           S+YH +R     PD       +K  SC  A    R +HA  +    + DPFV  SL+  Y
Sbjct: 6   SLYHFLRHVSFPPDPHLLPSALK--SC-PAQPLARALHAAAVVSGLAEDPFVASSLLHSY 62

Query: 639 AKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
            + G    A  +F +M  +N V W+A++ G +  G+ E    L E M++ GVEP+ +T+ 
Sbjct: 63  IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122

Query: 699 GVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           G++S  + +G   +A      M  + G  P+    S  + A+G
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSE-GFFPDATGVSCALSAVG 164



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 15/170 (8%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ G+S H   L    + D ++ + L+ MY++CG   +AR +FD MP R+++SWN+++  
Sbjct: 305 LMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGG 364

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETVHG 183
           YA    G+A N  +   LF S+++       +T   +L  C  +G       + +E   G
Sbjct: 365 YAM--HGDAANAVQ---LFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQG 419

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
           + +   +  + +    +V +  + GK+ EA  L + M  E D  +W  +L
Sbjct: 420 HGISPRM--EHY--ACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLL 465


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 205/649 (31%), Positives = 325/649 (50%), Gaps = 77/649 (11%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFY--SAVIVGNSLINMYSKMGCVC------------ 384
            +  A   N NL      TTL + ++  + V   NSLI   ++ G  C            
Sbjct: 23  FSTTAAATNTNL------TTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKL 76

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            ++ ++ T    +++ S+L + L+  KQ H  A+     +D FVS+ALID+Y + G ++ 
Sbjct: 77  DIKPNRSTFPCAIKSCSALFD-LNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSN 135

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM---------HTSGERLDEITI 495
           A  LF+     ++ TW ++I GY+ ++++H+AL +F               G  +D + +
Sbjct: 136 ARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAM 195

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
            + + AC  +      + +H  A+K G +  + V + +LD Y KCG +  ++ +F+D+  
Sbjct: 196 ISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE 255

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
            D V+W +MI+    NG    A  ++H M +  G   +E T + L+ A +   AL  G  
Sbjct: 256 KDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMC 315

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H  +IK+   ++  +  S++DMY KCG  E A   F  M  +N   W AM+ G   HG 
Sbjct: 316 LHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGF 375

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
             E L +F  M   GV+P+ +TFI VL+ACS+ G + E +  F+ M  +Y +EP VEHY 
Sbjct: 376 AREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG 435

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +VD LGRAG  KEA  LI SM       +  +LL ACR+  D E  +  A +L  L+P 
Sbjct: 436 CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPS 495

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           +   YVLL+NI+A A +W DV   R  +K + + K P                       
Sbjct: 496 NCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQ 555

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            + I+  +E L  +++E GYVP+   VL DV+EEEKE  +  HSEKLA A+G++++ P S
Sbjct: 556 HEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGS 615

Query: 892 VI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            I                     + ++E +   A RFHH +DG+C C D
Sbjct: 616 TIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGD 664



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 44/325 (13%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  GK  H + L      D F+++ L+ MYS+CG L  AR LFD++P R++++W S++ 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 128 AYAHSGEGNAENVTEGFRLFRSL---------RESITFTSRLTLAPLLKLCLSSGYVWAS 178
            Y  + + +     E   +F+            E  T    + +  +L  C        S
Sbjct: 157 GYVQNDDAH-----EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           E VHG A+K+GL     V   L++ Y+K G++  ++ +FD M E+DVV W  M+  YA+N
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESV--QCVLGVISDLGKRHEEQVQAYAIKLLLYNN--- 293
           G   + F +F  + ++G    +E      +L    +   R    +    IK+   NN   
Sbjct: 272 GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIM 331

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      NV  W   ++GY   G    A++ F  MI + V
Sbjct: 332 ATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGV 391

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQ 353
           + + +TF+  LAA +    L  G +
Sbjct: 392 KPNYITFISVLAACSHAGFLEEGWR 416



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 136/312 (43%), Gaps = 45/312 (14%)

Query: 110 LFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           LF+K  DR D+ SWNS++A  A  G+       E  R F  +R+     +R T    +K 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDS-----CESLRAFSWMRKLDIKPNRSTFPCAIKS 91

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C +   + + +  H  AL  G   D FVS AL+++YSK GK+  A+ LFD +  R++V W
Sbjct: 92  CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151

Query: 229 KVMLRAYAENGFGEEVFHLFVDL---------HRSGLCPDDESVQCVLGVISDLGKRH-E 278
             ++  Y +N    E   +F +             G   D  ++  VL   S +  +   
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211

Query: 279 EQVQAYAIKLLLYN----------------------------NNSNVVLWNKKLSGYLQV 310
           E V   AIK+ L                                 +VV WN  ++ Y Q 
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271

Query: 311 GDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
           G +  A E F  M+++   +Y+ VT    L A A    L +G  +H   +K G+ + VI+
Sbjct: 272 GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIM 331

Query: 370 GNSLINMYSKMG 381
             S+I+MY K G
Sbjct: 332 ATSIIDMYCKCG 343


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 202/634 (31%), Positives = 320/634 (50%), Gaps = 72/634 (11%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV  W   + G  + G      + F  M+ S +  D   +   + +  G D+L LG+ +H
Sbjct: 185 NVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVH 244

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------C---GLRT 388
              +  GF + + V  SL+NMY+K+G +                        C   GL  
Sbjct: 245 AQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHL 304

Query: 389 DQF----------------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           + F                TL SV +A   L + +++ K++   A +     +  V TAL
Sbjct: 305 EAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD-VNMGKEVQNCASELGIEGNVLVGTAL 363

Query: 433 IDVYCRNGSMAEAEYLFENK---DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           ID+Y + GS+ +A  +F+      G +   WNAMI GY  S  S +ALEL+  M  +G  
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVN-TPWNAMISGYSQSGCSQEALELYVQMCQNGIT 422

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC-VSSGILDMYVKCGAMVDAQS 548
            D  T  +   A      L+ G+ +H   +K G +L +  V++ I D Y KCG + D + 
Sbjct: 423 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 482

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           +F+ +   D V+WTT+++    +   + AL+ +  MR  G  P++FTF+ ++ + + L  
Sbjct: 483 VFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCF 542

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE GRQ+H  L K    ++  +  +L+DMYAKCG+I +A  +F ++   + V W A++ G
Sbjct: 543 LEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISG 602

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQHG  E+ L+LF  M+  G++ ++VT + VL ACS+ G+V E    F  M + YG+ P
Sbjct: 603 YAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVP 662

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           E+EHY+ ++D LGR GR  +A E I  MP E +  + + LLG CRV G+ E G+  A K+
Sbjct: 663 EMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKI 722

Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------- 832
           +++ P  S+ YVLLSN +     ++D  S R  MK + VKK+P                 
Sbjct: 723 LSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSG 782

Query: 833 -------DLIFAKVEGLIKRIKEGGYVPDTDFVL 859
                    I+ K+E L ++IK  GYVPD  +VL
Sbjct: 783 DQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVL 816



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 152/613 (24%), Positives = 261/613 (42%), Gaps = 94/613 (15%)

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN----IYS 205
           + E+   T    L  +L+ C   G +  ++ VHG  LK      + +   L N    +YS
Sbjct: 109 ISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLM--VLFNHAAHVYS 166

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES--- 262
           K  + R A  +FD M +R+V  W VM+    E+G   + F  F ++  SG+ PD  +   
Sbjct: 167 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSA 226

Query: 263 -VQCVLGVIS-DLGKRHEEQVQAYAIKLLLYNNNS------------------------N 296
            +Q  +G+ S +LGK    Q+        ++ + S                        N
Sbjct: 227 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 286

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
            V WN  +SG    G +  A + FV M       +  T +    AV    ++N+G+++  
Sbjct: 287 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQN 346

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCV-------------CGLRTDQFTLASVLRASSSL 403
              + G    V+VG +LI+MYSK G +             CG+ T    + S    S   
Sbjct: 347 CASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCS 406

Query: 404 PEGLHLSKQIHVHAIKND--TVADSF------------------------------VSTA 431
            E L L  Q+  + I +D  T    F                              V+ A
Sbjct: 407 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 466

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           + D Y + G + +   +F+  +  D+ +W  ++  Y  S+   +AL  F  M   G   +
Sbjct: 467 IADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPN 526

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           + T ++ + +C  L  L+ G+Q+H    K+G + + C+ S ++DMY KCG++ +A  +F+
Sbjct: 527 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 586

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            I  PD V+WT +ISG   +G  + AL ++ +M LSG+  +  T   ++ A S       
Sbjct: 587 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS------H 640

Query: 612 GRQIHANLIKLDCSSDPFVGIS-------LVDMYAKCGNIEDAYILFKQMDMR-NTVLWN 663
           G  +   L       D +  +        ++D+  + G ++DA    ++M M  N ++W 
Sbjct: 641 GGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQ 700

Query: 664 AMLVGLAQHGNGE 676
            +L G   HGN E
Sbjct: 701 TLLGGCRVHGNVE 713



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 258/605 (42%), Gaps = 99/605 (16%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDR---FLTNNLMTMYSRCGSLVYARRLFDKMP 115
           +LR       +   K+ H  +L S+   D+    L N+   +YS+C     A  +FD+MP
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSN-FEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 182

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R++ SW  ++      G        +GF+ F  +  S     +   + +++ C+    +
Sbjct: 183 QRNVFSWTVMIVGSTEHGL-----FFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSL 237

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + VH   +  G     FVS +L+N+Y+K G I ++ ++F+ M E + V W  M+   
Sbjct: 238 ELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 297

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDE---SVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
             NG   E F LFV +      P+     SV   +G + D+    E  VQ  A +L +  
Sbjct: 298 TSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE--VQNCASELGIEG 355

Query: 293 N------------------------NSNVV------LWNKKLSGYLQVGDNHGAIECFVN 322
           N                        ++N +       WN  +SGY Q G +  A+E +V 
Sbjct: 356 NVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 415

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMG 381
           M ++ +  D  T+     A+A + +L  G+ +HG  LK G    V+ V N++ + YSK G
Sbjct: 416 MCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCG 475

Query: 382 ----------------------------------------CVC---GLRTDQFTLASVLR 398
                                                   C+    G   +QFT +SVL 
Sbjct: 476 FLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLI 535

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           + +SL   L   +Q+H    K     +  + +ALID+Y + GS+ EA  +F+     D+ 
Sbjct: 536 SCASLCF-LEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIV 594

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQM 514
           +W A+I GY        AL+LF  M  SG + + +T+   + AC    M+++G    +QM
Sbjct: 595 SWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQM 654

Query: 515 H-AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNG 572
              Y +    E   C    I+D+  + G + DA      +P  P+++ W T++ GC  +G
Sbjct: 655 EDGYGVVPEMEHYAC----IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHG 710

Query: 573 EEDLA 577
             +L 
Sbjct: 711 NVELG 715



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 2/271 (0%)

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           VY +      A  +F+     ++ +W  MI G           + F  M  SG   D+  
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
            +  +++C  L  L+ GK +HA  +  GF   + VS+ +L+MY K G++ D+  +FN + 
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
             + V+W  MISGC  NG    A  ++ +M+     P+ +T   + KA   L  +  G++
Sbjct: 284 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 343

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ--MDMRNTVLWNAMLVGLAQH 672
           +     +L    +  VG +L+DMY+KCG++ DA  +F    ++      WNAM+ G +Q 
Sbjct: 344 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 403

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           G  +E L+L+  M  +G+  D  T+  V +A
Sbjct: 404 GCSQEALELYVQMCQNGITSDLYTYCSVFNA 434



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSS-QIPDRFLTNNLMTMYS 99
           ++Q      +S    + S+     ++  L  G+  H  +L     +    + N +   YS
Sbjct: 413 YVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYS 472

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR 159
           +CG L   R++FD+M +RD++SW +++ AY+ S  G      E    F  +RE     ++
Sbjct: 473 KCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGE-----EALATFCLMREEGFAPNQ 527

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T + +L  C S  ++     VHG   K GL  ++ +  AL+++Y+K G I EA  +FD 
Sbjct: 528 FTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDK 587

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           +   D+V W  ++  YA++G  E+   LF  +  SG+  +  ++ CVL   S  G   E
Sbjct: 588 ISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEE 646



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           +Y+KC     A  +F +M  RN   W  M+VG  +HG   +  K F +M   G+ PD   
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223

Query: 697 FIGVLSAC 704
           +  ++ +C
Sbjct: 224 YSAIIQSC 231


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 183/512 (35%), Positives = 275/512 (53%), Gaps = 49/512 (9%)

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSH-MHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
           +D   +N +I  Y  + +S     LF   M   G   ++ T    +K C  +  L+ GK 
Sbjct: 87  YDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKC 146

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCG--AMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           +H   +K GFE D+ V + ++ MY   G      A+ +F+D P  D V W+ MI+G V  
Sbjct: 147 VHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRL 206

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           G    A+ ++ +M++ GV PDE T   ++ A + L ALE G+ + + + K +      + 
Sbjct: 207 GCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELC 266

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            +L+DM+AKCGN++ A  LF+QMD R  V W +++ GLA HG G + + LF++M  +G+ 
Sbjct: 267 NALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGIT 326

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           PD V FIGVLSACS++GLV +    F  M   + I P+VEHY  +VD L R G  KEA E
Sbjct: 327 PDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFE 386

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
            +  MPFE +  + R ++ AC   G+ + G+ ++++L+  EP   S YVLLSNI+A   Q
Sbjct: 387 FVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQ 446

Query: 812 WDDVTSARGEMKRKNVKKDPADL-----------------------IFAKVEGLIKRIKE 848
           W+  T  R  M  + +KK P                          I+  V+ + + IK+
Sbjct: 447 WEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKK 506

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------- 893
            GYVP T  VLLD++EE+KE ALY HSEKLA A+ L++TPP + I               
Sbjct: 507 AGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSA 566

Query: 894 ------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                 + N+E +    NRFHH ++G+C C D
Sbjct: 567 TKFISKVYNREIVVRDRNRFHHFKNGLCSCRD 598



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 156/306 (50%), Gaps = 11/306 (3%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS--M 442
           G+  ++FT   VL+  + +   L L K +H   +K     D  V   LI +YC  G    
Sbjct: 120 GVTPNKFTFPFVLKGCAGI-GSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGF 178

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
             AE +F++    D  TW+AMI G++    S +A++LF  M   G   DEIT+ + + AC
Sbjct: 179 EFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSAC 238

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
             L  L+ GK + +Y  K      + + + ++DM+ KCG +  A  +F  + +   V+WT
Sbjct: 239 ADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWT 298

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           ++I+G   +G    A+S++ +M  +G+ PD+  F  ++ A S    +++GR    ++ + 
Sbjct: 299 SVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMER- 357

Query: 623 DCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETL 679
           + S  P V     +VD+  + G +++A+   ++M    N ++W  ++   A H  GE  L
Sbjct: 358 NFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIIT--ACHATGE--L 413

Query: 680 KLFEDM 685
           KL E +
Sbjct: 414 KLGESI 419



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 27/294 (9%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWF---- 57
           +T   +NL   H  T  +F   +  T    PS+   L   L +++  +  S S  F    
Sbjct: 56  FTSTSSNLNSIHYATSFLFPP-SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYR 114

Query: 58  SILRHAISTS---------------DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG 102
           ++LR+ ++ +                L LGK  H  ++      D  + N L+ MY   G
Sbjct: 115 TMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLG 174

Query: 103 S--LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
                +A ++FD  P  D ++W++++A +   G       +    LFR ++        +
Sbjct: 175 EDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCS-----SRAVDLFREMQVMGVCPDEI 229

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T+  +L  C   G +   + V  Y  K  +     +  AL+++++K G + +A  LF  M
Sbjct: 230 TMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQM 289

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
             R +V W  ++   A +G G +   LF ++  +G+ PDD +   VL   S  G
Sbjct: 290 DSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSG 343



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 43/321 (13%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF--------DKMPDRDLISWNSILA 127
           HA IL +    +  +     +  S   S+ YA               P  D   +N+++ 
Sbjct: 38  HAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIR 97

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AY+ + +  + +    F  +R++       ++ T   +LK C   G +   + VHG  +K
Sbjct: 98  AYSQTRDSKSNS----FLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVK 153

Query: 188 IGLVWDEFVSGALVNIYSKFGK--IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            G   D  V   L+++Y   G+     A+ +FD   + D V W  M+  +   G      
Sbjct: 154 FGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAV 213

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAY-------------------- 284
            LF ++   G+CPD+ ++  VL   +DLG     + V++Y                    
Sbjct: 214 DLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMF 273

Query: 285 --------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                   AIKL    ++  +V W   ++G    G    A+  F  M+ + +  D V F+
Sbjct: 274 AKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFI 333

Query: 337 VALAAVAGTDNLNLGQQIHGT 357
             L+A + +  ++ G+   G+
Sbjct: 334 GVLSACSHSGLVDKGRYYFGS 354



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 180/478 (37%), Gaps = 112/478 (23%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
           T  +RLT   +L L  S     +  T +H + LK GL  +  +     +  S    I  A
Sbjct: 10  TPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYA 69

Query: 214 -KFLFDGMQER-------DVVLWKVMLRAYAENGFGE-EVFHLFVDLHRSGLCPDDESV- 263
             FLF             D  L+  ++RAY++    +   F  +  + R G+ P+  +  
Sbjct: 70  TSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFP 129

Query: 264 ---------------QCVLGVISDLGKRHEEQVQA-----------------YAIKLLLY 291
                          +CV G +   G   EE V                   +A K+   
Sbjct: 130 FVLKGCAGIGSLRLGKCVHGCVVKFG--FEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDD 187

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           +   + V W+  ++G++++G +  A++ F  M    V  D +T +  L+A A    L LG
Sbjct: 188 SPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELG 247

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
           + +     K     +V + N+LI+M++K G                    ++ + + L +
Sbjct: 248 KWVESYVEKKNIPKSVELCNALIDMFAKCG--------------------NVDKAIKLFR 287

Query: 412 QIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYI 468
           Q+    I         VS T++I     +G   +A  LF+   ++G    T + + F  +
Sbjct: 288 QMDSRTI---------VSWTSVIAGLAMHGRGLDAVSLFDEMVENGI---TPDDVAFIGV 335

Query: 469 LSNNSHKAL-ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           LS  SH  L +   +   S ER    +I   V+  GC+                      
Sbjct: 336 LSACSHSGLVDKGRYYFGSMER--NFSIVPKVEHYGCM---------------------- 371

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
                 +D+  + G + +A      +P  P+ + W T+I+ C   GE  L  SI  ++
Sbjct: 372 ------VDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKEL 423


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 229/765 (29%), Positives = 349/765 (45%), Gaps = 133/765 (17%)

Query: 201 VNIYSKFGKIREAKFLFDG--MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           ++ Y + G I  A+ +FD   + +R +  W  M+ AY E+    +   LF  +      P
Sbjct: 26  ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM------P 79

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
              +V    G+IS   K     + A A K+       NVV W   + GY+Q G    A +
Sbjct: 80  QRNTVS-FNGMISGYVK---NGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEK 135

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M R NV    V++ V +  +     ++  +++     +      V+V  ++I  Y 
Sbjct: 136 LFWEMPRRNV----VSWTVMIGGLLKESRIDDAKKLFDMIPEKD----VVVVTNMIGGYC 187

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           ++G                     L E   L  ++ V  +        F  T ++  Y +
Sbjct: 188 QVG--------------------RLDEARELFDEMKVRNV--------FTWTTMVSGYAK 219

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
           NG +  A  LFE     +  +W AM+ GY  S    +A ELF  M               
Sbjct: 220 NGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVK-----------W 268

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC  +++                             +   G M  A+ +F  +   D+
Sbjct: 269 IVACNEMIL----------------------------QFGLAGEMHRARMMFEGMKERDE 300

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
             W  MI      G +  AL ++ +M+  GV  +  +   ++   + L +L+ GRQ+HA 
Sbjct: 301 GTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHAR 360

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           L++ +   D +V   L+ MY KCG++  A  +F +   ++ V+WN+M+ G +QHG GEE 
Sbjct: 361 LVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEA 420

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L +F DM + GV+PD VTFIGVLSACSY+G V E +E F  M+  Y +EP +EHY+ +VD
Sbjct: 421 LNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVD 480

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            LGRAGR  EA EL+  MP E  A +  ALLGACR     +  +   EKL  LEP ++  
Sbjct: 481 LLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGP 540

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVK-----------------------KDPADLI 835
           YVLLS+++A   +W DV   R ++ R+ +K                            +I
Sbjct: 541 YVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMI 600

Query: 836 FAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSV 892
              +E L   ++E GY PD  FVL DV+EEEK  +L YHSE+LA AYGL+  P   P  V
Sbjct: 601 TQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRV 660

Query: 893 I------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +                  ++ +E +   ANRFHH +DG C C D
Sbjct: 661 MKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKD 705



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 163/610 (26%), Positives = 260/610 (42%), Gaps = 110/610 (18%)

Query: 76  HARILNSSQIPDRFLTNNL--MTMYSRCGSLVYARRLFDK--MPDRDLISWNSILAAYAH 131
           +A  L    +  R L +N   ++ Y R G +  AR++FD   +P R + SWN++++AY  
Sbjct: 5   YAATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFE 64

Query: 132 SGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           S         +   LF  +  R +++F   +           SGYV              
Sbjct: 65  S-----HKPRDALLLFDQMPQRNTVSFNGMI-----------SGYV-------------- 94

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
                           K G + +A+ +FD M ER+VV W  M+R Y + G  EE   LF 
Sbjct: 95  ----------------KNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFW 138

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
           ++ R  +     S   ++G     G   E ++   A KL       +VV+    + GY Q
Sbjct: 139 EMPRRNVV----SWTVMIG-----GLLKESRIDD-AKKLFDMIPEKDVVVVTNMIGGYCQ 188

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
           VG    A E F  M   NV                            TT+ SG+      
Sbjct: 189 VGRLDEARELFDEMKVRNV-------------------------FTWTTMVSGYAK---- 219

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVL--RASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
            N  +++  K+  V   R +    A ++    S  + E   L + + V  I         
Sbjct: 220 -NGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWI--------V 270

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
               +I  +   G M  A  +FE     D  TWNAMI  +       +AL LF+ M   G
Sbjct: 271 ACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREG 330

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
             L+  ++ + +  C  L  L  G+Q+HA  ++S F+ DL V+S ++ MYVKCG +V A+
Sbjct: 331 VALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAK 390

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            IFN     D V W +MI+G   +G  + AL+++H M  SGV PDE TF  ++ A S   
Sbjct: 391 GIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSG 450

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQMDMR-NTVLW 662
            +++G +I      + C+     GI     +VD+  + G +++A  L ++M M  + ++W
Sbjct: 451 KVKEGFEIFE---AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVW 507

Query: 663 NAMLVGLAQH 672
            A+L     H
Sbjct: 508 GALLGACRNH 517



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 119/523 (22%), Positives = 220/523 (42%), Gaps = 105/523 (20%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P R     N +++ Y + G +  AR++FD MP+R+++SW S++  Y   G      V 
Sbjct: 77  QMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEG-----MVE 131

Query: 142 EGFRLFRSL--RESITFT---------SRLTLAP-LLKLCLSSGYVWASETVHGYALKIG 189
           E  +LF  +  R  +++T         SR+  A  L  +      V  +  + GY  ++G
Sbjct: 132 EAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYC-QVG 190

Query: 190 LV------WDE------FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            +      +DE      F    +V+ Y+K G++  A+ LF+ M ER+ V W  ML  Y +
Sbjct: 191 RLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQ 250

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
           +G  +E F LF  +    +   +E +    G+    G+ H  ++    +K        + 
Sbjct: 251 SGRMKEAFELFEAMPVKWIVACNEMI-LQFGLA---GEMHRARMMFEGMK------ERDE 300

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
             WN  +  + + G +  A+  F  M R  V  +  + +  L+  A   +L+ G+Q+H  
Sbjct: 301 GTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHAR 360

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            ++S F   + V + LI MY K    CG          ++RA       L          
Sbjct: 361 LVRSEFDQDLYVASVLITMYVK----CG---------DLVRAKGIFNRFL---------- 397

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                  D  +  ++I  Y ++G   EA                               L
Sbjct: 398 -----FKDVVMWNSMITGYSQHGLGEEA-------------------------------L 421

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILD 535
            +F  M +SG + DE+T    + AC     +K+G ++   AMK  ++++  +   + ++D
Sbjct: 422 NVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE-AMKCTYQVEPGIEHYACMVD 480

Query: 536 MYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +  + G + +A  +   +P  PD + W  ++  C ++ + DLA
Sbjct: 481 LLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLA 523



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 11/224 (4%)

Query: 61  RHAISTSDLLLGKSTHARILNSSQI----PDRFLT--NNLMTMYSRCGSLVYARRLFDKM 114
           R+ +S + +L+G +   R+  + ++    P +++   N ++  +   G +  AR +F+ M
Sbjct: 236 RNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGM 295

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
            +RD  +WN+++  +   G        E   LF  ++      +  ++  +L +C S   
Sbjct: 296 KERDEGTWNAMIKVFERKGLD-----LEALGLFARMQREGVALNFPSMISVLSVCASLAS 350

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +     VH   ++     D +V+  L+ +Y K G +  AK +F+    +DVV+W  M+  
Sbjct: 351 LDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITG 410

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           Y+++G GEE  ++F D+  SG+ PD+ +   VL   S  GK  E
Sbjct: 411 YSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKE 454



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+L    S + L  G+  HAR++ S    D ++ + L+TMY +CG LV A+ +F++   
Sbjct: 339 ISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLF 398

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +D++ WNS++  Y+  G G      E   +F  +  S      +T   +L  C  SG V 
Sbjct: 399 KDVVMWNSMITGYSQHGLGE-----EALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVK 453

Query: 177 ASETVHGYALKIGLVWDEFVS--GALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLR 233
               +   A+K     +  +     +V++  + G++ EA  L + M  E D ++W  +L 
Sbjct: 454 EGFEIF-EAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLG 512

Query: 234 A 234
           A
Sbjct: 513 A 513



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 53/284 (18%)

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV--AWTTMISGCVDNGEEDLALSIYHQM 584
           LC ++  +  Y + G + +A+ +F++ P P     +W  M+S   ++ +   AL ++ QM
Sbjct: 19  LCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM 78

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
                V    +F  ++        +   R++   + + +  S      S+V  Y + G +
Sbjct: 79  PQRNTV----SFNGMISGYVKNGMVADARKVFDVMPERNVVS----WTSMVRGYVQEGMV 130

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           E+A  LF +M  RN V W  M+ GL +    ++  KLF+ +     E D V    ++   
Sbjct: 131 EEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGY 186

Query: 705 SYTGLVSEAYENFHLM------------------------REKYGIEPEVEHYSFLVDAL 740
              G + EA E F  M                        R+ + + PE    S+    +
Sbjct: 187 CQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLM 246

Query: 741 G--RAGRTKEAGELILSMP-------------FEASASMHRALL 769
           G  ++GR KEA EL  +MP             F  +  MHRA +
Sbjct: 247 GYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARM 290


>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 182/544 (33%), Positives = 275/544 (50%), Gaps = 105/544 (19%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           A WN +I  Y   N    AL +++ +      +D     + +KACG +   + GK++H +
Sbjct: 125 AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGF 184

Query: 518 AMKSGFELDL--------------CV---------------------SSGILDMYVKCGA 542
            +K G + D+              CV                     ++ +LDMY KCG 
Sbjct: 185 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGH 244

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           +  A+ +FN +     V+WT MI+GC+ +   +    ++ +M+   + P+E T       
Sbjct: 245 LGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM------ 298

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
                       ++   +++DC     +  +LVDMYAKCG+I  A  LF +   R+  +W
Sbjct: 299 ------------LNKERVEVDC----ILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 342

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           NA++ G A HG GEE L +F +M+  GV+P+ +TFIG+L ACS+ GLV+E  + F  M  
Sbjct: 343 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH 402

Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGK 782
            +G+ P++EHY  +VD LGRAG   EA E+I SMP + +  +  AL+ ACR+  + + G+
Sbjct: 403 TFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGE 462

Query: 783 WVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGL 842
             A +L+ +EP +    VL+SNI+AAAN+W D    R  MK   +KK+P   +  +V G 
Sbjct: 463 LAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI-EVNGT 521

Query: 843 I------------------------KRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKL 878
           +                        +++ E GYVPDT  VLL+++EEEKE AL YHSEKL
Sbjct: 522 VHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKL 581

Query: 879 ARAYGLISTPPSSVILSNKE---------------PLYA--------NRFHHLRDGMCPC 915
           A A+GLIST PS+ I   K                 +Y         NRFHH R+G C C
Sbjct: 582 AMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSC 641

Query: 916 ADNC 919
            D C
Sbjct: 642 GDYC 645



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 24/296 (8%)

Query: 7   ANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST 66
           + L P  +  +VI +S+TK   RN P  +L++   L+K  F   +  +   S+L+     
Sbjct: 119 SGLSPSAQWNFVI-TSYTK---RNQPRNALNVYAQLRKMDFEVDNFMAP--SVLKACGQV 172

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW---- 122
           S   LGK  H  +L      D F+ N LM MY  C  + YAR +FDKM +RD++SW    
Sbjct: 173 SWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTT 232

Query: 123 NSILAAYAHSGE-GNAENVTEGFRL-----FRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
            ++L  YA  G  G A  +  G        + ++      ++RL     L + +    ++
Sbjct: 233 TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 292

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
            +E       ++ +  D  ++ ALV++Y+K G I  A  LF     RD+ +W  ++  +A
Sbjct: 293 PNEITMLNKERVEV--DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA 350

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAI 286
            +G+GEE   +F ++ R G+ P+D +   +L      G++++  K  E+ V  + +
Sbjct: 351 MHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 406



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 131/331 (39%), Gaps = 67/331 (20%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  ++ Y +      A+  +  + + + + D+      L A        LG++IHG  L
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV----------------------------------CG 385
           K G    V VGN+L+ MY +  CV                                   G
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246

Query: 386 LRTDQFT-------------LASVLRASSSLPEGLHLSKQIHVHAI---------KNDTV 423
           L    F              +A  +R S+ L EG  L  ++    I         K    
Sbjct: 247 LARQLFNGLTQKTVVSWTAMIAGCIR-SNRLEEGTKLFIRMQEENIFPNEITMLNKERVE 305

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            D  ++TAL+D+Y + G +  A  LF      D+  WNA+I G+ +     +AL++F+ M
Sbjct: 306 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 365

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYV 538
              G + ++IT    + AC    ++ +GK++     H + +    E   C    ++D+  
Sbjct: 366 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC----MVDLLG 421

Query: 539 KCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           + G + +A  +   +P  P+ + W  +++ C
Sbjct: 422 RAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 452



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 55/280 (19%)

Query: 121 SWNSILAAYAHSGEG-NAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGYVWAS 178
            WN ++ +Y    +  NA NV    R        + F     +AP +LK C    +    
Sbjct: 126 QWNFVITSYTKRNQPRNALNVYAQLR-------KMDFEVDNFMAPSVLKACGQVSWTQLG 178

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW----KVMLRA 234
           + +HG+ LK GL  D FV  AL+ +Y +   +  A+ +FD M ERDVV W      +L  
Sbjct: 179 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDM 238

Query: 235 YAE-----------NGFG--------------------EEVFHLFVDLHRSGLCPDDES- 262
           YA+           NG                      EE   LF+ +    + P++ + 
Sbjct: 239 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM 298

Query: 263 -------VQCVLGV-ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
                  V C+L   + D+  +  + + A A +L +   + ++ +WN  ++G+   G   
Sbjct: 299 LNKERVEVDCILNTALVDMYAKCGD-INA-AGRLFIEAISRDICMWNAIITGFAMHGYGE 356

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            A++ F  M R  V+ + +TF+  L A +    +  G+++
Sbjct: 357 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 396


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 180/526 (34%), Positives = 287/526 (54%), Gaps = 85/526 (16%)

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK-ALELFSHMHTSGERLDEITIAT 497
           +GS+ ++  +FE     ++ +W A+I  Y+ S    K A+ELF  M           I+ 
Sbjct: 8   DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM-----------ISA 56

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           +V                            CV + ++ MY + G M DA+  F+ +   +
Sbjct: 57  SVN---------------------------CVGNSLISMYARSGRMEDARKAFDILFEKN 89

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
            V++  ++ G   N + + A  +++++  +G+    FTFA L+  ++ + A+ +G QIH 
Sbjct: 90  LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 149

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L+K    S+  +  +L+ MY++CGNIE A+ +F +M+ RN + W +M+ G A+HG    
Sbjct: 150 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 209

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L++F  M   G +P+ +T++ VLSACS+ G++SE  ++F+ M +++GI P +EHY+ +V
Sbjct: 210 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 269

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGR+G   EA E I SMP  A A + R LLGACRV G+TE G+  AE ++  EP D +
Sbjct: 270 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 329

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADL 834
           AY+LLSN+ A+A QW DV   R  MK +N+ K+                        A  
Sbjct: 330 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 389

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           I+ +++ L  +IKE GY+PDTDFVL D+EEE+KE+ L+ HSEK+A A+GLIST  S  I 
Sbjct: 390 IYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIR 449

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                + +E +   +NRFHH+++G+C C D
Sbjct: 450 IFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 495



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 132/252 (52%), Gaps = 4/252 (1%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           V  +LI +Y R+G M +A   F+     +L ++NA++ GY  +  S +A  LF+ +  +G
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
             +   T A+ +     +  + +G+Q+H   +K G++ + C+ + ++ MY +CG +  A 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +FN++   + ++WT+MI+G   +G    AL ++H+M  +G  P+E T+  ++ A S + 
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240

Query: 608 ALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD-MRNTVLWNA 664
            + +G Q H N +  +    P +     +VD+  + G + +A      M  M + ++W  
Sbjct: 241 MISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRT 299

Query: 665 MLVGLAQHGNGE 676
           +L     HGN E
Sbjct: 300 LLGACRVHGNTE 311



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 103/189 (54%), Gaps = 5/189 (2%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N+L++MY+R G +  AR+ FD + +++L+S+N+I+  YA + +       E F LF  + 
Sbjct: 63  NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE-----EAFLLFNEIA 117

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           ++    S  T A LL    S G +   E +HG  LK G   ++ +  AL+++YS+ G I 
Sbjct: 118 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 177

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A  +F+ M++R+V+ W  M+  +A++GF      +F  +  +G  P++ +   VL   S
Sbjct: 178 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 237

Query: 272 DLGKRHEEQ 280
            +G   E Q
Sbjct: 238 HVGMISEGQ 246



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 165/377 (43%), Gaps = 53/377 (14%)

Query: 296 NVVLWNKKLSGYLQVGD-NHGAIECFVNMIRSNVQYDSVTFLVALAAVAG--TDNLNLGQ 352
           NV+ W   ++ Y+Q G+ +  AIE F  MI ++V     + L+++ A +G   D      
Sbjct: 25  NVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNS-LISMYARSGRMEDARKAFD 83

Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------CGLRTDQFTLASVLRASSSLPE 405
            +    L S  Y+A++ G +  N+ S+   +        G+    FT AS+L  ++S+  
Sbjct: 84  ILFEKNLVS--YNAIVDGYAK-NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG- 139

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            +   +QIH   +K    ++  +  ALI +Y R G++  A  +F   +  ++ +W +MI 
Sbjct: 140 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 199

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFE 524
           G+     + +ALE+F  M  +G + +EIT    + AC  + M+ +G K  ++   + G  
Sbjct: 200 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 259

Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             +   + ++D+  + G +V+A    N +P   D + W T++  C  +G  +L       
Sbjct: 260 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL------- 312

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
                                       GR   A +I      DP   I L +++A  G 
Sbjct: 313 ----------------------------GRHA-AEMILEQEPDDPAAYILLSNLHASAGQ 343

Query: 644 IEDAYILFKQMDMRNTV 660
            +D   + K M  RN +
Sbjct: 344 WKDVVKIRKSMKERNLI 360



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/289 (20%), Positives = 129/289 (44%), Gaps = 74/289 (25%)

Query: 97  MYSRC---GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           MY++C   GS+  +R++F++MP+ +++SW +I+ AY  SGE +              +E+
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECD--------------KEA 46

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
           I    ++  A +                              V  +L+++Y++ G++ +A
Sbjct: 47  IELFCKMISASV----------------------------NCVGNSLISMYARSGRMEDA 78

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           +  FD + E+++V +  ++  YA+N   EE F LF ++  +G+     +   +L   + +
Sbjct: 79  RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 138

Query: 274 GKRHE-EQVQAYAIK-------------LLLYN---------------NNSNVVLWNKKL 304
           G   + EQ+    +K             + +Y+                + NV+ W   +
Sbjct: 139 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 198

Query: 305 SGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +G+ + G    A+E F  M+ +  + + +T++  L+A +    ++ GQ+
Sbjct: 199 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 15/215 (6%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L  A S   +  G+  H R+L      ++ + N L++MYSRCG++  A ++F++M DR
Sbjct: 130 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 189

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++ISW S++  +A  G       T    +F  + E+ T  + +T   +L  C   G +  
Sbjct: 190 NVISWTSMITGFAKHG-----FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 244

Query: 178 SETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML--- 232
            +       K  G+V        +V++  + G + EA    + M    D ++W+ +L   
Sbjct: 245 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 304

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           R +     G     + ++       PDD +   +L
Sbjct: 305 RVHGNTELGRHAAEMILEQE-----PDDPAAYILL 334



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 43/225 (19%)

Query: 536 MYVKC---GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL-ALSIYHQMRLSGVVP 591
           MY KC   G++ D++ +F  +P  + ++WT +I+  V +GE D  A+ ++ +M       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
                   + AS                  ++C     VG SL+ MYA+ G +EDA   F
Sbjct: 54  --------ISAS------------------VNC-----VGNSLISMYARSGRMEDARKAF 82

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             +  +N V +NA++ G A++   EE   LF ++   G+   + TF  +LS  +  G + 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           +  E  H    K G +      + L+    R G  + A ++   M
Sbjct: 143 KG-EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 186


>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 214/706 (30%), Positives = 353/706 (50%), Gaps = 80/706 (11%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY---SKFGKIREAKFLF 217
           T   LLK   + G +     +H + +K G     +++  L+ +Y    KF +I +    F
Sbjct: 23  TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-- 275
           DG    D+V+   M+ AY + G   +   LF ++      P+   V     +IS L K  
Sbjct: 83  DG---SDLVVSNCMISAYVQWGNLVQARLLFDEM------PERNEVSWS-ALISGLMKYG 132

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           R EE +  +       N   NVV W   +SG+++ G N  A++ F  ++ S V+ + VTF
Sbjct: 133 RVEESMWYFE-----RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTF 187

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
              + A     +  LG  I G  +K+GF   + V NSLI +  +MG              
Sbjct: 188 TSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMG-------------- 233

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
                      + L++++     K D V+     TA++D Y   G + EA  +F+     
Sbjct: 234 ----------EIDLARRVFDRMEKRDVVS----WTAILDAYVETGDLREARRIFDEMPER 279

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           +  +W+AMI  Y  S  + +AL+LFS M   G + +    A  + A   L  L  G  +H
Sbjct: 280 NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIH 339

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN------------------------ 551
            +  K G + D+ + S ++D+Y KCG   D + +F+                        
Sbjct: 340 GHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLE 399

Query: 552 -------DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                   IP  +DV+W T+I+G ++N + +  L +++ + +SG  P++ TF+ ++ A +
Sbjct: 400 ETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACA 459

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            + +L++G  +H  +IKL    D FVG +L DMYAKCG+I  +  +F++M  +N + W  
Sbjct: 460 SIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTV 519

Query: 665 MLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           M+ GLA+ G   E+L LFE+M +   V P+ +  + VL ACS+ GLV +    F+ M + 
Sbjct: 520 MIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKV 579

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           YGI+P+ +HY+ +VD L R+GR  EA E I ++PF+  A+   ALL  C+   D +  + 
Sbjct: 580 YGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAER 639

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            A+KL  L   +S+ YVLLSNI+A+A +W DV++ R  M+ K +KK
Sbjct: 640 TAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKK 685



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 230/596 (38%), Gaps = 134/596 (22%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   HA ++ +     R++   L+ +Y  C       ++  +    DL+  N +++AY  
Sbjct: 40  GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     N+ +   LF  + E                                  +  + 
Sbjct: 100 WG-----NLVQARLLFDEMPE----------------------------------RNEVS 120

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           W   +SG +     K+G++ E+ + F+    ++VV W   +  +  NG   E   LF  L
Sbjct: 121 WSALISGLM-----KYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRL 175

Query: 252 HRSGLCPDDESVQCV----------------LGVISDLGKRHEEQVQAYAIKLLL----- 290
             SG+ P+D +   V                LG++   G  H   V    I L L     
Sbjct: 176 LESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEI 235

Query: 291 --------YNNNSNVVLWNKKLSGYLQVGD------------------------------ 312
                        +VV W   L  Y++ GD                              
Sbjct: 236 DLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSG 295

Query: 313 -NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A++ F  M++   + +   F   L+A+A    L+ G  IHG   K G    V +G+
Sbjct: 296 YAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGS 355

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           SLI++Y    C CG   D             L   L L K +                 +
Sbjct: 356 SLIDLY----CKCGKPDD-----------GRLVFDLILEKNV-------------VCWNS 387

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           ++  Y  NG + E E LFE     +  +W  +I GY+ +    K LE+F+ +  SG+  +
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           + T ++ + AC  +  L +G  +H   +K G + D+ V + + DMY KCG +  ++ +F 
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFT-FAILVKASSC 605
            +P  ++++WT MI G  ++G    +L ++ +M R S V P+E    ++L   S C
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHC 563



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/506 (22%), Positives = 190/506 (37%), Gaps = 114/506 (22%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
           R+ +  +  D      ++  Y   G L  ARR+FD+MP+R+ ISW++++A Y+ SG    
Sbjct: 240 RVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAE- 298

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
               E  +LF  + +     +    A  L    S   + A   +HG+  KIG+  D F+ 
Sbjct: 299 ----EALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIG 354

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            +L+++Y K GK  + + +FD + E++VV W  M+  Y+ NG       L        L 
Sbjct: 355 SSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSING------RLEETEELFELI 408

Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
           P+   V                                    W   ++GYL+       +
Sbjct: 409 PEKNDVS-----------------------------------WGTIIAGYLENEQCEKVL 433

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
           E F  ++ S    +  TF   L A A   +L+ G  +HG  +K G    + VG +L +MY
Sbjct: 434 EVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMY 493

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
           +K G           + S  +    +PE   +S                   T +I    
Sbjct: 494 AKCG----------DIGSSKQVFERMPEKNEIS------------------WTVMIQGLA 525

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDE 492
            +G   E+  LFE  +       N ++   +L   SH     K L  F+ M         
Sbjct: 526 ESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSME-------- 577

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
                                   Y +K   +   CV    +D+  + G + +A+     
Sbjct: 578 ----------------------KVYGIKPKGKHYTCV----VDLLSRSGRLYEAEEFIRT 611

Query: 553 IP-APDDVAWTTMISGCVDNGEEDLA 577
           IP  P+  AW  ++SGC    +E +A
Sbjct: 612 IPFQPEANAWAALLSGCKKYKDEKIA 637



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
           + + S + S+L    S + L  G + H +I+      D F+   L  MY++CG +  +++
Sbjct: 445 TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQ 504

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKL 168
           +F++MP+++ ISW  ++   A SG        E   LF  + R S    + L L  +L  
Sbjct: 505 VFERMPEKNEISWTVMIQGLAESGFA-----VESLILFEEMERTSEVAPNELMLLSVLFA 559

Query: 169 CLSSGYV----W---ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
           C   G V    W   + E V+G   K G  +       +V++ S+ G++ EA+
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPK-GKHYT-----CVVDLLSRSGRLYEAE 606


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 192/586 (32%), Positives = 301/586 (51%), Gaps = 80/586 (13%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H   IK      S +S  L+DVY + G + +A  LF+     D  +W +++  +  + 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 472 NSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
              + L + + M T  G + D    A  V+AC  L  L+ GKQ+HA  M S F  D  V 
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE----DLAL-------- 578
           S ++DMY KCG   DA+++F+ I   + V+WT+MISG   +G +    DL L        
Sbjct: 144 SSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203

Query: 579 -------------------SIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGRQIHAN 618
                              S++++MR  G+ + D    + +V   + L  LE G+QIH  
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           +I L   S  F+  +LVDMYAKC +I  A  +F +M  ++ + W +++VG AQHG  EE 
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEA 323

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L L+++M    ++P+ VTF+G+L ACS+ GLVS   E F  M   Y I P ++HY+ L+D
Sbjct: 324 LTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLD 383

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            L R+G   EA  L+  +PF+       +LL AC    + E G  +A++++ L+P D S 
Sbjct: 384 LLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPST 443

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--ADLIFAK------------------ 838
           Y+LLSN++A A  W  V+  R  M    V+K+P  + + F K                  
Sbjct: 444 YILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNE 503

Query: 839 ----VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
               ++ L   +++ GYVP+T FVL D+E++EKE+ L++HSE+LA AYGL+   P ++I 
Sbjct: 504 ICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIR 563

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                               +  +E +   A R+HH ++G C C D
Sbjct: 564 IVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCND 609



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 222/535 (41%), Gaps = 123/535 (22%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H++I+ +       L+N L+ +Y +CG +  A +LFD+MP+RD +SW SIL A+      
Sbjct: 26  HSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAH------ 79

Query: 136 NAENVTEGFRLFRSLRESITF----TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           N   +    R    L    T           A +++ C S GY+   + VH   +     
Sbjct: 80  NKALIPR--RTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFC 137

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            DE V  +L+++Y+K G+  +A+ +FD +  ++ V W  M+  YA +G   E   LF   
Sbjct: 138 DDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLF--- 194

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                                        +QA            N+  W   +SG +Q G
Sbjct: 195 -----------------------------LQAPV---------RNLFSWTALISGLIQSG 216

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN---LNLGQQIHGTTLKSGFYSAVI 368
               +   F  M R  +  D V  LV  + V G  N   L LG+QIHG  +  GF S + 
Sbjct: 217 HGIYSFSLFNEMRREGI--DIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           + N+L++MY+K              + +L A           K I     + D ++    
Sbjct: 275 ISNALVDMYAK-------------CSDILAA-----------KDIFYRMPRKDVIS---- 306

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            T++I    ++G   EA           L  ++ M+   I  N                 
Sbjct: 307 WTSIIVGTAQHGKAEEA-----------LTLYDEMVLSRIKPN----------------- 338

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDA 546
              E+T    + AC    ++ +G+++   +M + + ++  +   + +LD+  + G + +A
Sbjct: 339 ---EVTFVGLLYACSHAGLVSRGRELFR-SMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           +++ + IP  PD+  W +++S C+ +   ++ + I    R+  + P++ +  IL+
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIAD--RVLDLKPEDPSTYILL 447



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 40/277 (14%)

Query: 31  LPSFSLSLLPF------LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQ 84
           +P  +LS+L        LQ  HF        +  I+R   S   L LGK  HAR + S  
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFV-------FACIVRACSSLGYLRLGKQVHARFMLSFF 136

Query: 85  IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG----------E 134
             D  + ++L+ MY++CG    AR +FD +  ++ +SW S+++ YA SG          +
Sbjct: 137 CDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196

Query: 135 GNAENVTE----------------GFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWA 177
               N+                   F LF  + RE I     L L+ ++  C +   +  
Sbjct: 197 APVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLEL 256

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  + +G     F+S ALV++Y+K   I  AK +F  M  +DV+ W  ++   A+
Sbjct: 257 GKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQ 316

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G  EE   L+ ++  S + P++ +   +L   S  G
Sbjct: 317 HGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG 353



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H  ++        F++N L+ MY++C  ++ A+ +F +MP +D+ISW SI+  
Sbjct: 254 LELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVG 313

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
            A  G+       E   L+  +  S    + +T   LL  C  +G V       G  L  
Sbjct: 314 TAQHGKAE-----EALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLV-----SRGRELFR 363

Query: 189 GLVWDEFVSGA------LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            +  D  ++ +      L+++ S+ G + EA+ L D +  + D   W  +L A
Sbjct: 364 SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSA 416


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 284/537 (52%), Gaps = 46/537 (8%)

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           F+S  L+D+Y + GS+ EA+ +F+     ++ +W  ++ G++ S    +A++LF  M   
Sbjct: 77  FLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQE 136

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           GE  D + +   + +CG    L QG+++H+ A   G + DL  ++ I++MY KCG++ +A
Sbjct: 137 GELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEA 196

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
            ++F  +P  + ++W+TMI+    N   D AL  +  M+  G+  D  T+  ++ A + +
Sbjct: 197 FAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSV 256

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            ALE G+ +H  ++     +   VG +LV+MY KCG+ +DA  +F  M  +N V WNAML
Sbjct: 257 GALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAML 316

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
               Q+G   E L LF+ M   GV P+ +TF+ +L  CS++G   +A  +F  MR+ +GI
Sbjct: 317 AAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGI 376

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P   H+  L+D LGR+G+ +EA ELI +MP  A A +  +LL AC    D +     AE
Sbjct: 377 TPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAE 436

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------- 832
           +    EP  ++AY++LSN++AA  +WD+    R  M++  V+K                 
Sbjct: 437 EAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFV 496

Query: 833 ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                      IF  ++ L+  ++  GY PD   V+  +EEEEK+  L+YHSEKLA A+G
Sbjct: 497 AGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFG 556

Query: 884 LISTPPSS--VILSNKEPLY---------------------ANRFHHLRDGMCPCAD 917
           + STPP +   I+ N                          +NRFHH   G C C D
Sbjct: 557 IASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGD 613



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 138/258 (53%), Gaps = 1/258 (0%)

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           ++ C     L++G+++H +      +    +S+ ++DMY KCG++V+A+ +F+ +   + 
Sbjct: 48  IRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNV 107

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
            +WT +++G V +G    A+ ++H+M   G +PD       + +     AL QGR+IH+ 
Sbjct: 108 FSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSA 167

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
                  SD     ++++MY KCG+I +A+ +F +M  +N + W+ M+    Q+   +E 
Sbjct: 168 AASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEA 227

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L  F+ M+  G+E D +T++ VL A +  G + E  +  H+     G++  +   + LV+
Sbjct: 228 LLFFKLMQQEGMELDRITYVSVLDAYTSVGAL-ELGKALHVRIVYAGLDTSIVVGNTLVN 286

Query: 739 ALGRAGRTKEAGELILSM 756
             G+ G   +A ++  SM
Sbjct: 287 MYGKCGSPDDARDVFDSM 304



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 7/270 (2%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           ++R       L  G+  H  + + +    RFL+N L+ MY +CGSLV A+R+FD M  ++
Sbjct: 47  LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN 106

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           + SW  ++A +  SG G      E  +LF  + +      R+ L   +  C ++  +   
Sbjct: 107 VFSWTMLMAGFVQSGRG-----VEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQG 161

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             +H  A   G+  D   + A++N+Y K G I EA  +F  M E++V+ W  M+ A+ +N
Sbjct: 162 REIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQN 221

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
              +E    F  + + G+  D  +   VL   + +G    E  +A  ++++    ++++V
Sbjct: 222 ELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGAL--ELGKALHVRIVYAGLDTSIV 279

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
           + N  ++ Y + G    A + F +M+  NV
Sbjct: 280 VGNTLVNMYGKCGSPDDARDVFDSMVEKNV 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 23/327 (7%)

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
           T L +GF  +   G   I ++ +M C  G   D+  L   +  S    + L   ++IH  
Sbjct: 111 TMLMAGFVQSG-RGVEAIQLFHRM-CQEGELPDRVALLKFI-DSCGAAKALSQGREIHSA 167

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
           A      +D   + A+I++Y + GS+ EA  +F      ++ +W+ MI  +  +  + +A
Sbjct: 168 AASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEA 227

Query: 477 LELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
           L  F  M   G  LD IT  + + A   +  L+ GK +H   + +G +  + V + +++M
Sbjct: 228 LLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNM 287

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y KCG+  DA+ +F+ +   + V+W  M++    NG    AL+++  M L GV P++ TF
Sbjct: 288 YGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITF 347

Query: 597 AILV----------KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
             ++           A S    + Q   I    +   C         L+DM  + G +E+
Sbjct: 348 VTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGC---------LIDMLGRSGKLEE 398

Query: 647 AYILFKQMDM-RNTVLWNAMLVGLAQH 672
           A  L + M +  + VLW ++L     H
Sbjct: 399 AEELIQAMPVPADAVLWTSLLCACVTH 425



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 5/204 (2%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H+   +     D    N ++ MY +CGS+  A  +F +MP++++ISW++++AA+  
Sbjct: 161 GREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQ 220

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +     E   E    F+ +++      R+T   +L    S G +   + +H   +  GL 
Sbjct: 221 N-----ELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLD 275

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
               V   LVN+Y K G   +A+ +FD M E++VV W  ML AY +NG   E   LF  +
Sbjct: 276 TSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSM 335

Query: 252 HRSGLCPDDESVQCVLGVISDLGK 275
              G+ P+D +   +L   S  GK
Sbjct: 336 DLEGVRPNDITFVTILYCCSHSGK 359



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 166/441 (37%), Gaps = 94/441 (21%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           L  L++ C  +  +     +H +     L    F+S  LV++Y K G + EAK +FD MQ
Sbjct: 44  LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQ 103

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD--------------------- 260
            ++V  W +++  + ++G G E   LF  + + G  PD                      
Sbjct: 104 HKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGRE 163

Query: 261 -ESVQCVLGVISDLGKRHEEQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVG 311
             S     G+ SDL   +   +  Y        A  +       NV+ W+  ++ + Q  
Sbjct: 164 IHSAAASCGMDSDLVTAN-AIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNE 222

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A+  F  M +  ++ D +T++  L A      L LG+ +H   + +G  ++++VGN
Sbjct: 223 LADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGN 282

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           +L+NMY K G                                       D   D F S  
Sbjct: 283 TLVNMYGKCG-------------------------------------SPDDARDVFDSMV 305

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
             +V   N  +A                       Y  +  S +AL LF  M   G R +
Sbjct: 306 EKNVVSWNAMLA----------------------AYGQNGRSREALALFDSMDLEGVRPN 343

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSG-ILDMYVKCGAMVDAQSI 549
           +IT  T +  C      K     H   M+  F +    V  G ++DM  + G + +A+ +
Sbjct: 344 DITFVTILYCCSHSGKFKDAVS-HFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEEL 402

Query: 550 FNDIPAP-DDVAWTTMISGCV 569
              +P P D V WT+++  CV
Sbjct: 403 IQAMPVPADAVLWTSLLCACV 423



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 1/198 (0%)

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           A T  +S  ++ G  D        +  SG          L++  +   ALE+GR+IH  +
Sbjct: 8   AITKWLSPVLECGGVDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWM 67

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
                    F+   LVDMY KCG++ +A  +F  M  +N   W  ++ G  Q G G E +
Sbjct: 68  DSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAI 127

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           +LF  M   G  PD V  +  + +C     +S+  E  H      G++ ++   + +++ 
Sbjct: 128 QLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGRE-IHSAAASCGMDSDLVTANAIINM 186

Query: 740 LGRAGRTKEAGELILSMP 757
            G+ G   EA  +   MP
Sbjct: 187 YGKCGSIGEAFAVFTRMP 204



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 22/231 (9%)

Query: 20  FSSFTKDTYRNLPSFSLSLLPFLQK-------------SHFSSSSSSSQWFSILRHAIST 66
           F+ FT+   +N+ S+S  +  F Q                         + S+L    S 
Sbjct: 197 FAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSV 256

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
             L LGK+ H RI+ +       + N L+ MY +CGS   AR +FD M +++++SWN++L
Sbjct: 257 GALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAML 316

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           AAY  +G        E   LF S+       + +T   +L  C  SG  +     H   +
Sbjct: 317 AAYGQNGRSR-----EALALFDSMDLEGVRPNDITFVTILYCCSHSGK-FKDAVSHFVEM 370

Query: 187 K--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
           +   G+   E   G L+++  + GK+ EA+ L   M    D VLW  +L A
Sbjct: 371 RQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCA 421


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 190/579 (32%), Positives = 290/579 (50%), Gaps = 49/579 (8%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           + W   ++GY+   D++ A+  F NM +    Q D     VAL A A   N+  G+ +HG
Sbjct: 89  ISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHG 148

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------------------CVCGL-------- 386
            ++KSG   +V V ++LI+MY K+G                       + GL        
Sbjct: 149 FSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNME 208

Query: 387 ---------RT----DQFTLASVLRAS--SSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                    R+    D  T A  L+AS  SSL   LH  K IH   IK      SFV   
Sbjct: 209 GLLYFSEMWRSKVGYDSHTFAIALKASADSSL---LHHGKAIHTQTIKQGFDESSFVINT 265

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L  +Y + G       LFE     D+ +W  +I  Y+       A+E F  M  S    +
Sbjct: 266 LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPN 325

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           + T A  + +C  L   K G+Q+H + ++ G    L V++ I+ +Y KCG +  A  +F+
Sbjct: 326 KYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFH 385

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            I   D ++W+T+IS     G    A      MR  G  P+EF  + ++     +  LEQ
Sbjct: 386 GITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 445

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           G+Q+HA+L+ +    +  V  +++ MY+KCG++++A  +F  M + + + W AM+ G A+
Sbjct: 446 GKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAE 505

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG  +E + LFE + + G++PD V FIGVL+AC++ G+V   +  F LM   Y I P  E
Sbjct: 506 HGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKE 565

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HY  L+D L RAGR  EA  +I SMPF     +   LL ACRV GD + G+W AE+L+ L
Sbjct: 566 HYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQL 625

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           +P  +  ++ L+NI+AA  +W +    R  MK K V K+
Sbjct: 626 DPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKE 664



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 259/604 (42%), Gaps = 100/604 (16%)

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDR-----FLTNNLMTMYS------RCGSLVYARRL 110
           H IS   +L G +T  R L    I ++     +  +N++ + S      + G L  AR +
Sbjct: 20  HYISNRYILTGTATECRELIQQPIQEQPAENAYSVHNMLELNSELKQLVKQGQLCKARYM 79

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC 169
           FDKM  RD ISW +++A Y      NA +  E   LF ++         +  ++  LK C
Sbjct: 80  FDKMTHRDEISWTTLIAGYV-----NASDSYEALILFSNMWVHPGPQRDQFMISVALKAC 134

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
                +   E +HG+++K GL+   FVS AL+++Y K GKI +   +F+ M  R+VV W 
Sbjct: 135 ALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWT 194

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA 283
            ++      G+  E    F ++ RS +  D  +    L   +D      GK  H + ++ 
Sbjct: 195 AIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ 254

Query: 284 -----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                                  Y ++L       +VV W   +S Y+Q+G+   A+E F
Sbjct: 255 GFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAF 314

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M +S V  +  TF   +++ A       G+QIHG  L+ G  +A+ V NS+I +YSK 
Sbjct: 315 KRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKC 374

Query: 381 GCVC-------------------------------------------GLRTDQFTLASVL 397
           G +                                            G + ++F L+SVL
Sbjct: 375 GLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 434

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
               S+   L   KQ+H H +      ++ V +A+I +Y + GS+ EA  +F      D+
Sbjct: 435 SVCGSMAL-LEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDI 493

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----K 512
            +W AMI GY     S +A+ LF  + + G + D +     + AC    M+  G      
Sbjct: 494 ISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFML 553

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDN 571
             + Y +    E   C    ++D+  + G + +A+ I   +P   DDV W+T++  C  +
Sbjct: 554 MTNVYRISPSKEHYGC----LIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVH 609

Query: 572 GEED 575
           G+ D
Sbjct: 610 GDVD 613



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 35/328 (10%)

Query: 54  SQWFSILRHAISTSDLLL-GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           S  F+I   A + S LL  GK+ H + +        F+ N L TMY++CG   Y  RLF+
Sbjct: 225 SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFE 284

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           KM   D++SW ++++ Y   GE   E+  E F+    +R+S    ++ T A ++  C + 
Sbjct: 285 KMRMPDVVSWTTLISTYVQMGE--EEHAVEAFK---RMRKSYVSPNKYTFAAVISSCANL 339

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                 E +HG+ L++GLV    V+ +++ +YSK G ++ A  +F G+  +D++ W  ++
Sbjct: 340 AAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTII 399

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL----------------GKR 276
             Y++ G+ +E F     + R G  P++ ++  VL V   +                G  
Sbjct: 400 SVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGID 459

Query: 277 HEEQVQAYAIKLL-----------LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
           HE  V +  I +            ++N    ++++ W   ++GY + G +  AI  F  +
Sbjct: 460 HEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKI 519

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               ++ D V F+  L A      ++LG
Sbjct: 520 SSVGLKPDYVMFIGVLTACNHAGMVDLG 547


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 191/580 (32%), Positives = 292/580 (50%), Gaps = 50/580 (8%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN  + G+  +G    A+  +  M+      D  TF   + A  G +++ LG+ +H    
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLR-------------------------------- 387
             GF   V VG+SLI  YS+ GC+   R                                
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234

Query: 388 -----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALID 434
                       +  T A VL   +S    ++   Q+H   + +    DS V+   ALID
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCAS-EIMINFGSQLHGLVVSSGLEMDSPVANTFALID 293

Query: 435 VY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +Y  CR+  MA    +F+ +   D+    AMI GY+L+  ++ ALE+F  +     R + 
Sbjct: 294 IYFKCRDVEMARK--IFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           +T+A+ + AC  L  L  GK++H + +K+G      V S I+DMY KCG +  A   F  
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           I   D V W +MI+ C  NG+ + A+ ++ QM ++G   D  + +  + A + L AL  G
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           ++IHA +++    SD F   +L+DMY+KCGN++ A  +F  M+ +N V WN+++     H
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G  +++L LF  M   G++PD VTF+ ++SAC + G V E    F  M E+ GI   +EH
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 591

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD  GRAGR  EA  +I SMPF   A +   LLGACR+ G+ E  +  +  L  L+
Sbjct: 592 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLD 651

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P +S  YVLLSN+ A A QW+ V   R  MK + V+K P 
Sbjct: 652 PQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPG 691



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 161/655 (24%), Positives = 279/655 (42%), Gaps = 107/655 (16%)

Query: 13  HKHTYVIFSSFTKDTYRNLPSF---SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDL 69
           HK+   I+  F   T   L SF   S+++   LQ S  +  S + Q  SIL+     S L
Sbjct: 3   HKNLSSIYKCFLPSTTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGL 62

Query: 70  LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
             G+  HA++L +    +  L   L+ MY  CG+ + A+ +F ++       WN ++  +
Sbjct: 63  SQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
              G+            +  +    T   + T   ++K C     V     VH     +G
Sbjct: 123 TMMGQ-----FDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMG 177

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D FV  +L+  YS+ G I +A++LFD M  +D VLW VML  Y +NG  +    +F+
Sbjct: 178 FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFM 237

Query: 250 DLHRSGLCPDDESVQCVLGVI-SDLGKRHEEQVQAYAI---------------------- 286
           ++ R+   P+  +  CVL V  S++      Q+    +                      
Sbjct: 238 EMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFK 297

Query: 287 --------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                   K+       ++V+    +SGY+  G N+ A+E F  +++  ++ +SVT    
Sbjct: 298 CRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASV 357

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG----------------C 382
           L A AG   L LG+++HG  LK+G   +  VG+++++MY+K G                 
Sbjct: 358 LPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDA 417

Query: 383 VC---------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHV 415
           VC                           G + D  ++++ L A ++LP  LH  K+IH 
Sbjct: 418 VCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP-ALHYGKEIHA 476

Query: 416 HAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
             ++    +D F  +ALID+Y + G++  A  +F+  +  +  +WN++I  Y        
Sbjct: 477 FMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKD 536

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS--GI 533
           +L LF  M   G + D +T    + ACG           HA  +  G     C++   GI
Sbjct: 537 SLNLFHGMLGDGIQPDHVTFLAIISACG-----------HAGQVDEGIHYFRCMTEELGI 585

Query: 534 L----------DMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +          D++ + G + +A  + N +P +PD   W T++  C  +G  +LA
Sbjct: 586 MARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELA 640



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 184/390 (47%), Gaps = 7/390 (1%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           L S+L+  +  P GL   +Q H   + N    +  + T L+ +Y   G+  +A+ +F   
Sbjct: 49  LVSILQTCTD-PSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
             +    WN MI G+ +      AL  +  M   G   D+ T    +KACG L  +  G+
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGR 167

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
            +H      GFELD+ V S ++  Y + G + DA+ +F+ +P+ D V W  M++G V NG
Sbjct: 168 VVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNG 227

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG- 631
           + D A  ++ +MR +   P+  TFA ++   +    +  G Q+H  ++      D  V  
Sbjct: 228 DWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVAN 287

Query: 632 -ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +L+D+Y KC ++E A  +F Q    + V+  AM+ G   +G     L++F  +    +
Sbjct: 288 TFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 347

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             +SVT   VL AC+    ++   E + H+++  +G    V   S ++D   + GR   A
Sbjct: 348 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLA 405

Query: 750 GELILSMPFEASASMHRALLGACRVQGDTE 779
            +  + +  +  A    +++ +C   G  E
Sbjct: 406 HQTFIGIS-DKDAVCWNSMITSCSQNGKPE 434


>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
          Length = 628

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 180/527 (34%), Positives = 290/527 (55%), Gaps = 28/527 (5%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G  TD+FT   ++ A + L + L  ++++     + + ++ +     L   Y +NG +  
Sbjct: 71  GAATDRFTANHLMLAYADLGD-LTAARELFERIPRRNVMSWNI----LFGGYIKNGDLGG 125

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ATWNAM+ G        ++L LF  M   G   DE  + +  + C  
Sbjct: 126 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAG 185

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + + +++   +P+   V+  T+
Sbjct: 186 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 245

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G   NG+ + AL  +  MR  GV  D  TF   + + S L AL QG+QIH  ++K   
Sbjct: 246 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 305

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
                V   LV MY++CG + D+  +F      +T L +AM+     HG+G++ ++LF+ 
Sbjct: 306 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 365

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G EP  VTF+ +L ACS++GL  E  + F LM + YGI+P V+HY+ +VD LGR+G
Sbjct: 366 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSG 425

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA  LILSMP      + + LL AC+ Q + +  + +A++++ L+P DS++YVLLSN
Sbjct: 426 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSN 485

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I A + +W DV+  R  M+  NV+K+P                          I   +E 
Sbjct: 486 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 545

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
           ++ +I++ GY PD   VL D+E+EEKE +L +HSEKLA A+  +S P
Sbjct: 546 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLP 592



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 32/268 (11%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGIL----DM--------------------------- 536
           L+  +Q+HA+A  SG   D   ++ ++    D+                           
Sbjct: 57  LRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG 116

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y+K G +  A+ +F+++P  +   W  M++G  + G ++ +L ++  MR  G+ PDEF  
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGL 176

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             + +  + L  +  GRQ+HA +++     D  VG SL  MY +CG +++   + + +  
Sbjct: 177 GSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
            + V  N ++ G  Q+G+ E  L+ F  M++ GV  D VTF+  +S+CS    +++  + 
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQG-QQ 295

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAG 744
            H    K G++  V   + LV    R G
Sbjct: 296 IHGQVMKAGVDKVVPVMTCLVHMYSRCG 323



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 138/361 (38%), Gaps = 77/361 (21%)

Query: 296 NVVLWNKKLSGYLQVGDNHGA-------------------------------IECFVNMI 324
           NV+ WN    GY++ GD  GA                               +  F++M 
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMR 165

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
           R  +  D           AG  ++  G+Q+H   ++SG    + VG+SL +MY + GC+ 
Sbjct: 166 REGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 225

Query: 384 -------------------------------------CGLRT-----DQFTLASVLRASS 401
                                                C +R+     D  T  S + + S
Sbjct: 226 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   +QIH   +K        V T L+ +Y R G + ++E +F    G D    +
Sbjct: 286 DLA-ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI  Y    +  KA+ELF  M   G    ++T    + AC    + ++G        K+
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404

Query: 522 -GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G +  +   + ++D+  + G + +A+++   +P  PD V W T++S C      D+A  
Sbjct: 405 YGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 464

Query: 580 I 580
           I
Sbjct: 465 I 465



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 143/395 (36%), Gaps = 70/395 (17%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S +++ FS L  A      L  +  HA    S    DRF  N+LM  Y+  G L  AR L
Sbjct: 41  SDAARLFSHLFRACRALRPL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 98

Query: 111 FDKMPDRDLISWNSILAAYAHSGE-GNAENV-------------------------TEGF 144
           F+++P R+++SWN +   Y  +G+ G A  +                          E  
Sbjct: 99  FERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESL 158

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            LF  +R          L  + + C     V     VH Y ++ GL  D  V  +L ++Y
Sbjct: 159 GLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 218

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            + G ++E + +   +    +V    ++    +NG  E     F  +   G+  D  +  
Sbjct: 219 MRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFV 278

Query: 265 CVLGVISDL-----GKRHEEQVQAYAI------------------------KLLLYNNNS 295
             +   SDL     G++   QV    +                        ++      S
Sbjct: 279 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 338

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNL 348
           +  L +  +S Y   G    AIE F  M+    +   VTFL  L A +       G D  
Sbjct: 339 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            L  + +G       Y+ V      +++  + GC+
Sbjct: 399 ELMTKTYGIQPSVKHYTCV------VDLLGRSGCL 427



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L     +   +P  
Sbjct: 178 SVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 237

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
            ++S N+I+A    +G  ++E   E F + RS+    + +TF S ++       C     
Sbjct: 238 SIVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISS------CSDLAA 289

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +HG  +K G+     V   LV++YS+ G + +++ +F G    D  L   M+ A
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +   G  P D +   +L   S  G + EE +  + +    Y   
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLK-EEGMDCFELMTKTYGIQ 408

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G ++    +I S  +  D V +   L+A     N ++ ++
Sbjct: 409 PSV----KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 464

Query: 354 I 354
           I
Sbjct: 465 I 465



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 83/215 (38%), Gaps = 36/215 (16%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ L +A   L  L   RQ+HA       ++D F    L+  YA  G++  A  LF+++ 
Sbjct: 47  FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103

Query: 656 MRNTV-------------------------------LWNAMLVGLAQHGNGEETLKLFED 684
            RN +                                WNAM+ GL   G  EE+L LF D
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLD 163

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G+ PD      V   C+    V    +  H    + G++ ++   S L     R G
Sbjct: 164 MRREGMHPDEFGLGSVSRCCAGLRDVVTGRQ-VHAYVVRSGLDRDMCVGSSLAHMYMRCG 222

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
             +E GE +L M    S      ++      GD+E
Sbjct: 223 CLQE-GEAVLRMLPSLSIVSCNTIIAGRTQNGDSE 256


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/583 (33%), Positives = 299/583 (51%), Gaps = 55/583 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G R + FT    L++ ++L   + L  Q H    K   V + FV T LI +YC+   +  
Sbjct: 35  GDRPNAFTFPFALKSCAALSLPI-LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDN 93

Query: 445 AEYLFE-NKDGFDLAT-WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
           A  +FE N     L   +NA++ GY+ ++    A+ LF  M+  G  ++ +T+   + AC
Sbjct: 94  ARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPAC 153

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
              + L+ G  +H   +K GF+ D+ V +  + MY+KCG++  AQ +F+++P    ++W 
Sbjct: 154 VSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWN 213

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            M+SG   NG     L +Y  M ++GV PD  T   ++ + + L A   G ++   +   
Sbjct: 214 AMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQAS 273

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             +S+PF+  +L++MYA+CGN+  A  +F  M  R  V W A++ G   HG+GE  ++LF
Sbjct: 274 GFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLF 333

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           ++M   G+EPD   F+ VLSACS+ GL  +  E F +M+  Y +EP  EHYS +VD LGR
Sbjct: 334 KEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGR 393

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AGR KEA  LI SMP +   ++  ALLGAC++  + E  +   E+++ LEP +   YVLL
Sbjct: 394 AGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLL 453

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKV 839
           SNI++ AN    V   R  MK K +KKDP                       +D I+  +
Sbjct: 454 SNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 513

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKE--RALYYHSEKLARAYGLISTPPSS--VILS 895
           E L   I +    P+ D    + EE  K+    +  HSEKLA A+GL++T   +  VI+ 
Sbjct: 514 EELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIK 569

Query: 896 NKEPLY---------------------ANRFHHLRDGMCPCAD 917
           N                          A RFHH R+G C C D
Sbjct: 570 NLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKD 612



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 182/377 (48%), Gaps = 12/377 (3%)

Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
           +AL L+  M   G+R +  T   A+K+C  L +   G Q H    K G   +  V +G++
Sbjct: 23  QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 82

Query: 535 DMYVKCGAMVD-AQSIF--NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            MY K G++VD A+ +F  N       V +  ++SG V N +   A+ ++ QM   GV  
Sbjct: 83  SMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +  T   L+ A      LE G  +H + +K    SD  V    + MY KCG++  A  LF
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M ++  + WNAM+ G AQ+G     L+L+ +M  +GV PD VT +GVLS+C+  G  S
Sbjct: 202 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 261

Query: 712 EAYE-NFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
             +E  F +    +   P + +   L++   R G   +A  +   MP E +     A++G
Sbjct: 262 VGHEVEFKMQASGFTSNPFLNNA--LINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIG 318

Query: 771 ACRVQGDTETGKWVAEKLM--ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
              + G  E    + ++++   +EP D +A+V + +  + A   D        MKR N +
Sbjct: 319 GYGMHGHGEIAVQLFKEMIRSGIEP-DGTAFVCVLSACSHAGLTDQGLEYFKMMKR-NYQ 376

Query: 829 KDPADLIFAKVEGLIKR 845
            +P    ++ +  L+ R
Sbjct: 377 LEPGPEHYSCMVDLLGR 393



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 196/451 (43%), Gaps = 52/451 (11%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           WN +L    +      A+  +  M+R   + ++ TF  AL + A      LG Q HG   
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 360 KSGFYSAVIVGNSLINMYSKMG------------------CVC----------------- 384
           K G      V   LI+MY K                     VC                 
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 385 ----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
                     G+  +  TL  ++ A  S P  L L   +H   +K    +D  V    I 
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVS-PINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186

Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
           +Y + GS+  A+ LF+      L +WNAM+ GY  +  +   LEL+ +M  +G   D +T
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           +   + +C  L     G ++      SGF  +  +++ +++MY +CG +  AQ++F+ +P
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306

Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+WT +I G   +G  ++A+ ++ +M  SG+ PD   F  ++ A S     +QG +
Sbjct: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366

Query: 615 IHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQ 671
            +  ++K +   +P       +VD+  + G +++A  L + M ++ +  +W A+L     
Sbjct: 367 -YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           H N E     FE  +   +EP+++ +  +LS
Sbjct: 426 HKNVELAELAFE--RVIELEPENIGYYVLLS 454



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 5/238 (2%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           ++L F Q +      +S     ++   +S  +L LG S H   L      D  + N  +T
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CGS+ YA++LFD+MP + LISWN++++ YA +G   A NV E   L+R++  +   
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGL--ATNVLE---LYRNMDMNGVH 241

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
              +TL  +L  C + G       V       G   + F++ AL+N+Y++ G + +A+ +
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           FDGM ER +V W  ++  Y  +G GE    LF ++ RSG+ PD  +  CVL   S  G
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 40/341 (11%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +LSL P + + H    ++ +  F+ L+   + S  +LG   H +I     + + F+   L
Sbjct: 24  ALSLYPQMLR-HGDRPNAFTFPFA-LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 81

Query: 95  MTMYSRCGSLV-YARRLFDK-MPDRDL-ISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           ++MY + GSLV  AR++F++    R L + +N++++ Y  + +      ++   LFR + 
Sbjct: 82  ISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSK-----CSDAVLLFRQMN 135

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E     + +TL  L+  C+S   +    ++H   LK G   D  V    + +Y K G + 
Sbjct: 136 EEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVN 195

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
            A+ LFD M  + ++ W  M+  YA+NG    V  L+ ++  +G+ PD  ++  VL   +
Sbjct: 196 YAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCA 255

Query: 272 DLGKRH-----EEQVQAYAIKLLLYNNNS------------------------NVVLWNK 302
           +LG +      E ++QA       + NN+                         +V W  
Sbjct: 256 NLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTA 315

Query: 303 KLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
            + GY   G    A++ F  MIRS ++ D   F+  L+A +
Sbjct: 316 IIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 356



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 3/212 (1%)

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W T +       +   ALS+Y QM   G  P+ FTF   +K+ + L+    G Q H  + 
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ--MDMRNTVLWNAMLVGLAQHGNGEET 678
           K+ C  +PFV   L+ MY K   +++A  +F++     + TV +NA++ G   +    + 
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           + LF  M   GV  +SVT +G++ AC  + +  E   + H    KYG + +V   +  + 
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPAC-VSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              + G    A +L   MP +   S +  + G
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 218



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 98/470 (20%), Positives = 173/470 (36%), Gaps = 98/470 (20%)

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERD 224
           LK C +          HG   K+G V++ FV   L+++Y K   +  A+ +F+     R 
Sbjct: 47  LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRK 106

Query: 225 V-VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKR-H 277
           + V +  ++  Y  N    +   LF  ++  G+  +  ++      CV  +  +LG   H
Sbjct: 107 LTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLH 166

Query: 278 EEQVQ-----------------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
              ++                        YA KL        ++ WN  +SGY Q G   
Sbjct: 167 CSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLAT 226

Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
             +E + NM  + V  D VT +  L++ A     ++G ++      SGF S   + N+LI
Sbjct: 227 NVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALI 286

Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALI 433
           NMY++ G           L         +PE                    + VS TA+I
Sbjct: 287 NMYARCG----------NLTKAQAVFDGMPE-------------------RTLVSWTAII 317

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
             Y  +G    A  LF+                                M  SG   D  
Sbjct: 318 GGYGMHGHGEIAVQLFK-------------------------------EMIRSGIEPDGT 346

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFN 551
                + AC    +  QG + +   MK  ++L+      S ++D+  + G + +AQ++  
Sbjct: 347 AFVCVLSACSHAGLTDQGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIE 405

Query: 552 DIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
            +P  PD   W  ++  C  +   +LA   +   R+  + P+   + +L+
Sbjct: 406 SMPIKPDGAVWGALLGACKIHKNVELAELAFE--RVIELEPENIGYYVLL 453


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 196/592 (33%), Positives = 302/592 (51%), Gaps = 53/592 (8%)

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
           +N+Y +M    G   + FT     ++ +SL   L  S Q+H H IK     + FV T+LI
Sbjct: 41  LNLYCQM-LASGDSPNAFTFPFAFKSCASLSLPLAGS-QLHGHVIKTGCEPEPFVQTSLI 98

Query: 434 DVYCRNGSMAEAEYLF-ENKDGFDLAT-WNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
            +YC+  ++A A  +F EN    +LA  +NA+I GY L++    A+ LF  M   G  ++
Sbjct: 99  SMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVN 158

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
            +T+   +  C   + L  G  +HA +++ G + DL V + +L MYV+CG++  A+ +F+
Sbjct: 159 AVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFD 218

Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
            +P    + W  MISG   NG     L +Y +M  +G+VPD  T   ++ + + L A   
Sbjct: 219 GMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAA 278

Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
           GR++   +       +PF+  +L++MYA+CGN+  A  +F  M  +N + W A++ G   
Sbjct: 279 GREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGM 338

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
           HG GE  ++LF++M +    PD   F+ VLSACS+ GL  +    F  M   YG++P  E
Sbjct: 339 HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPE 398

Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
           HYS +VD LGRAGR +EA +LI SM  E   ++  ALLGAC++  + E  +   EK++  
Sbjct: 399 HYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEF 458

Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------------- 831
           EP +   YVLLSNIF+ A   + +   R  M+ + +KK+P                    
Sbjct: 459 EPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRT 518

Query: 832 ---ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
              A  I+  ++GL   IK  G   D D    +   EE    +  HSEKLA A+GLI+T 
Sbjct: 519 HPQAQEIYHMLDGLEDIIKRRGGSNDND---QESRNEELITGMGVHSEKLAIAFGLINTE 575

Query: 889 PSSVILSNKE-------PLY----------------ANRFHHLRDGMCPCAD 917
           P + I   K         L+                A RFHH ++G+C C D
Sbjct: 576 PGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKD 627



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 2/253 (0%)

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
           A+WNA +       +  +AL L+  M  SG+  +  T   A K+C  L +   G Q+H +
Sbjct: 22  ASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGH 81

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA--WTTMISGCVDNGEED 575
            +K+G E +  V + ++ MY KC  +  A+ +F++     ++A  +  +I+G   N    
Sbjct: 82  VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            A+ ++ QMR  GV  +  T   L+   +    L  G  +HA  ++     D  VG  L+
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            MY +CG+++ A  LF  M  +  + WNAM+ G AQ+G     L L+  M+  G+ PD V
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPV 261

Query: 696 TFIGVLSACSYTG 708
           T +GVLS+C++ G
Sbjct: 262 TLVGVLSSCAHLG 274



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 191/465 (41%), Gaps = 50/465 (10%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           YA K L   N +    WN +L    +      A+  +  M+ S    ++ TF  A  + A
Sbjct: 10  YANKWLDLQNTT--ASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCA 67

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR---------------- 387
                  G Q+HG  +K+G      V  SLI+MY K   +   R                
Sbjct: 68  SLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCY 127

Query: 388 -------------TDQFTLASVLRASS---------------SLPEGLHLSKQIHVHAIK 419
                        +D   L   +R                  + P  L     +H  +++
Sbjct: 128 NALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVR 187

Query: 420 NDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALEL 479
                D  V   L+ +Y R GS+  A  LF+      L TWNAMI GY  +  +   L+L
Sbjct: 188 FGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDL 247

Query: 480 FSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVK 539
           +  M  +G   D +T+   + +C  L     G+++      SGF  +  + + +++MY +
Sbjct: 248 YRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYAR 307

Query: 540 CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAIL 599
           CG +V A++IF+ +   + ++WT +I+G   +G+ +LA+ ++ +M  S  +PD   F  +
Sbjct: 308 CGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSV 367

Query: 600 VKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR- 657
           + A S     E+G      + +       P     +VD+  + G +E+A  L   M +  
Sbjct: 368 LSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEP 427

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
           +  +W A+L     H N E     FE  K    EP ++ +  +LS
Sbjct: 428 DGAVWGALLGACKIHRNVELAELAFE--KVIEFEPTNIGYYVLLS 470



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 5/241 (2%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
           FS ++L F Q      S ++     ++        L  G S HA  +      D  + N 
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           L+TMY RCGS+ +AR+LFD MP++ LI+WN++++ YA +G   A +V +   L+R +  +
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGL--AGHVLD---LYRKMEFT 254

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                 +TL  +L  C   G   A   V       G  ++ F+  AL+N+Y++ G + +A
Sbjct: 255 GIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKA 314

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
           + +FDGM E++V+ W  ++  Y  +G GE    LF ++  S   PD  +   VL   S  
Sbjct: 315 RAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA 374

Query: 274 G 274
           G
Sbjct: 375 G 375



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 36/310 (11%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK-MPDRDL-ISW 122
           S S  L G   H  ++ +   P+ F+  +L++MY +C ++  AR++FD+    R+L + +
Sbjct: 68  SLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCY 127

Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
           N+++A Y+ +        ++   LFR +R+     + +T+  L+ +C    ++    ++H
Sbjct: 128 NALIAGYSLN-----SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLH 182

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
             +++ GL  D  V   L+ +Y + G +  A+ LFDGM E+ ++ W  M+  YA+NG   
Sbjct: 183 ACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAG 242

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----RHEEQ---VQAYAIKLLLYN--- 292
            V  L+  +  +G+ PD  ++  VL   + LG     R  EQ   +  +     L N   
Sbjct: 243 HVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALI 302

Query: 293 -------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
                                 NV+ W   ++GY   G    A++ F  MI S+   D  
Sbjct: 303 NMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGA 362

Query: 334 TFLVALAAVA 343
            F+  L+A +
Sbjct: 363 AFVSVLSACS 372



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 5/184 (2%)

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL++Y QM  SG  P+ FTF    K+ + L+    G Q+H ++IK  C  +PFV  SL+ 
Sbjct: 40  ALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLIS 99

Query: 637 MYAKCGNIEDAYILFKQ-MDMRN-TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           MY KC  I  A  +F +    RN  V +NA++ G + +    + + LF  M+  GV  ++
Sbjct: 100 MYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNA 159

Query: 695 VTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
           VT +G++  C+  G +   +  + H    ++G++ ++   + L+    R G    A +L 
Sbjct: 160 VTMLGLIPVCA--GPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLF 217

Query: 754 LSMP 757
             MP
Sbjct: 218 DGMP 221



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 145/367 (39%), Gaps = 43/367 (11%)

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           SWN+ L   A        +  E   L+  +  S    +  T     K C S     A   
Sbjct: 23  SWNARLRELARQ-----RHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD-GMQERDV-VLWKVMLRAYAEN 238
           +HG+ +K G   + FV  +L+++Y K   I  A+ +FD     R++ V +  ++  Y+ N
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD---LG---KRHEEQVQ---------- 282
               +   LF  + + G+  +  ++  ++ V +    LG     H   V+          
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 283 -------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
                         +A KL        ++ WN  +SGY Q G     ++ +  M  + + 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT- 388
            D VT +  L++ A       G+++      SGF     + N+LINMY++ G +   R  
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 389 -DQFTLASVLRASSSLPE-GLH----LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
            D  T  +V+  ++ +   G+H    L+ Q+    I +D + D     +++      G  
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377

Query: 443 AEAEYLF 449
            +  Y F
Sbjct: 378 EKGLYYF 384


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 180/500 (36%), Positives = 276/500 (55%), Gaps = 53/500 (10%)

Query: 470 SNNSH-KALELFSHMHTSGERLDEI--TIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
           +N +H KA+   S+ H     L       A+ +++C     +K GKQ+HA    +GF  D
Sbjct: 50  NNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFD 109

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             +++ ++++Y  C ++  A+ +F+ IP  +   W  +I G   NG  + A+ +Y+QM  
Sbjct: 110 TVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFD 169

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
            G+VPD FTF  ++KA + L+A+E GR+IH ++++     D FVG +L+DMYAKCG +  
Sbjct: 170 YGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGS 229

Query: 647 AYILFKQMDMRNTVL---WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           A  +F ++ +R+ VL   WNAM+ G A HG+  E L LFE+M     +PD +TF+GVLSA
Sbjct: 230 AREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMN-RVAKPDHITFVGVLSA 288

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS+ GL+ E +  F  M   Y I+P V+HY+ +VD LG +GR  EA  LI+ M     + 
Sbjct: 289 CSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSG 348

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +  ALL +C++  + E G+   E+L+ LEP D+  YV+LSNI+A A +W+ V   R  M 
Sbjct: 349 VWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMT 408

Query: 824 RKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
            + +KK  A                       D I++++E +   +KE GY P T  V  
Sbjct: 409 DRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFH 468

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK-----EPLY-------------- 901
           DVE++EK   +  HSE+LA A+GLISTPP + +L  K     E  +              
Sbjct: 469 DVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREI 528

Query: 902 ----ANRFHHLRDGMCPCAD 917
                NR+HH +DG+C C D
Sbjct: 529 TVRDVNRYHHFKDGVCSCGD 548



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 153/311 (49%), Gaps = 12/311 (3%)

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           S  N +++  C+    ++  +L     A  ++  G  L  Q+ +     DTV    ++T 
Sbjct: 60  SCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV----IATK 115

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L+++YC   S++ A  LF+     ++  WN +I GY  +     A++L+  M   G   D
Sbjct: 116 LVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPD 175

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
             T    +KAC  L  ++ G+++H + +++G+E D+ V + ++DMY KCG +  A+ +F+
Sbjct: 176 NFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235

Query: 552 DIPAPDD---VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
            I   D    V+W  MI+G   +G    AL ++ +M      PD  TF  ++ A S    
Sbjct: 236 KILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGL 294

Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMD-MRNTVLWNAM 665
           LE+G      +I+ D   DP V     +VD+    G +++AY L  QM  + ++ +W A+
Sbjct: 295 LEEGWMFFETMIR-DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGAL 353

Query: 666 LVGLAQHGNGE 676
           L     H N E
Sbjct: 354 LNSCKIHANVE 364



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 36  LSLLPFLQKSHFSSS---SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           L  +P     H  S+    + S + S+L+  I+   +  GK  HA++  +    D  +  
Sbjct: 55  LKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIAT 114

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE 152
            L+ +Y  C SL  AR LFD++P  ++  WN ++  YA +G   A       +L+  + +
Sbjct: 115 KLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEA-----AVQLYYQMFD 169

Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
                   T   +LK C +   +     +H + ++ G   D FV  AL+++Y+K G +  
Sbjct: 170 YGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGS 229

Query: 213 AKFLFDGMQERDVVL---WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           A+ +FD +  RD VL   W  M+  YA +G   E   LF +++R    PD  +   VL  
Sbjct: 230 AREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVAK-PDHITFVGVLSA 288

Query: 270 ISDLG 274
            S  G
Sbjct: 289 CSHGG 293



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 33/230 (14%)

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
           A LL+ C++   +   + +H      G  +D  ++  LVN+Y     +  A+ LFD + +
Sbjct: 79  ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KR 276
            ++ LW V++R YA NG  E    L+  +   GL PD+ +   VL   + L       + 
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198

Query: 277 HEEQVQA---------------YA-----------IKLLLYNNNSNVVLWNKKLSGYLQV 310
           HE  VQ                YA              +L  +   VV WN  ++GY   
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMH 258

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
           G    A++ F  M R   + D +TF+  L+A +    L  G     T ++
Sbjct: 259 GHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIR 307



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+ LWN  + GY   G    A++ +  M    +  D+ TF   L A A    +  G++IH
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
              +++G+   V VG +LI+MY+K GCV   R
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAR 231


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/588 (33%), Positives = 302/588 (51%), Gaps = 81/588 (13%)

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
           +K+IH   +K+       +   L+D Y +   + +A YLF+     D  +W +++  Y  
Sbjct: 21  AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80

Query: 470 SNNSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           +   +K L +F +M T+ +RL  D    AT +KAC  L  L+ GKQ+HA  + S F  D 
Sbjct: 81  AKLPNKTLSIFHYMFTT-DRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDD 139

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH----- 582
            V S ++DMY KCG    A+S+F+ I     V+WT M+SG   +G +D A+ ++      
Sbjct: 140 VVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVR 199

Query: 583 --------------------------QMRLSGV-VPDEFTFAILVKASSCLTALEQGRQI 615
                                     +MR  GV + D    + +V A + L  L  G+QI
Sbjct: 200 NLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQI 259

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           H  +I     S  F+  +LVDMYAKC +I  A  +F +M  R+ V W +++VG AQHG  
Sbjct: 260 HGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRA 319

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
           +E L L++ M    ++P+ VTF+G++ ACS+ GLVS+  + F  M E Y I P ++ ++ 
Sbjct: 320 KEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTC 379

Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
            +D L R+G   EA +LI +MP +       ALL AC+  G+TE G  +A++L++L   +
Sbjct: 380 FLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHE 439

Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
            S YVLLSN++A A +W+ ++  R  M    VK+ P                        
Sbjct: 440 PSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMK 499

Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
           D IF  ++ L   +++ GY+PDT +VL D+EE+EKER L++HSE+ A AYGL+   P +V
Sbjct: 500 DEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTV 559

Query: 893 I---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           I                     + +KE +   A R+HH +DG C C D
Sbjct: 560 IRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCND 607



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 188/389 (48%), Gaps = 34/389 (8%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           V W   L+ Y Q    +  +  F  M  ++ +Q D   +   L A A   +L LG+Q+H 
Sbjct: 69  VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
             + S F    +V +SL++MY+K    CGL        S+ R+                 
Sbjct: 129 RFVLSPFVDDDVVKSSLVDMYAK----CGL-------PSIARS----------------- 160

Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKA 476
              +  V  S   TA++  Y R+G   EA  LF      +L +W A+I G + S      
Sbjct: 161 VFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDG 220

Query: 477 LELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
             +F  M   G + +D + +++ V AC  L +L  GKQ+H   + SG+E  L +S+ ++D
Sbjct: 221 CYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVD 280

Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
           MY KC  ++ A+++FN +   D V+WT++I G   +G    AL +Y QM L+ + P+E T
Sbjct: 281 MYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVT 340

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQ 653
           F  L+ A S    + +GR++   +I+ D    P + +    +D+ ++ G++ +A  L K 
Sbjct: 341 FVGLIYACSHAGLVSKGRKLFKAMIE-DYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKT 399

Query: 654 MDMR-NTVLWNAMLVGLAQHGNGEETLKL 681
           M  + +   W A+L     HGN E  +++
Sbjct: 400 MPHKPDEPTWAALLSACKHHGNTEMGVRI 428



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 130/573 (22%), Positives = 224/573 (39%), Gaps = 118/573 (20%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            K  HA+I+ S     + L N L+  Y +C  L  A  LFD+MP RD +SW SIL AY  
Sbjct: 21  AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +   N + ++    +F + R           A LLK C S   +   + VH   +    V
Sbjct: 81  AKLPN-KTLSIFHYMFTTDRLQ---PDHFVYATLLKACASLCSLRLGKQVHARFVLSPFV 136

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D+ V  +LV++Y+K G    A+ +FD +  +  V W  ML  YA +G  +E        
Sbjct: 137 DDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDE-------- 188

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                                            A++L L     N+  W   +SG +Q G
Sbjct: 189 ---------------------------------AMELFLRTPVRNLYSWTALISGLVQSG 215

Query: 312 DNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
                   F+ M R  V   D +     + A A    L LG+QIHG  + SG+ S + + 
Sbjct: 216 YCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFIS 275

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           N+L++MY+K              + +L A +     LH                D    T
Sbjct: 276 NALVDMYAK-------------CSDILAARNVFNRMLH---------------RDVVSWT 307

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ++I    ++G   EA                               L+L+  M  +  + 
Sbjct: 308 SIIVGAAQHGRAKEA-------------------------------LDLYDQMVLAEIKP 336

Query: 491 DEITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVD 545
           +E+T    + AC    ++ +G+++       Y +    +L  C     LD+  + G + +
Sbjct: 337 NEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTC----FLDLLSRSGHLNE 392

Query: 546 AQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           A+ +   +P  PD+  W  ++S C  +G  ++ + I  ++ LS  + +  T+ +L    +
Sbjct: 393 AEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRL-LSLNMHEPSTYVLLSNVYA 451

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
                EQ  ++   +  ++    P  G S +D+
Sbjct: 452 GAGKWEQMSRVRKLMTDMEVKRKP--GYSSIDL 482



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 40/264 (15%)

Query: 30  NLPSFSLSLLPF------LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSS 83
            LP+ +LS+  +      LQ  HF        + ++L+   S   L LGK  HAR + S 
Sbjct: 82  KLPNKTLSIFHYMFTTDRLQPDHFV-------YATLLKACASLCSLRLGKQVHARFVLSP 134

Query: 84  QIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG---------- 133
            + D  + ++L+ MY++CG    AR +FD +  +  +SW ++L+ YA SG          
Sbjct: 135 FVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFL 194

Query: 134 EGNAENV----------------TEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVW 176
                N+                 +G  +F  + RE +     L L+ ++  C +   + 
Sbjct: 195 RTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLG 254

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + +HG  +  G     F+S ALV++Y+K   I  A+ +F+ M  RDVV W  ++   A
Sbjct: 255 LGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAA 314

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDD 260
           ++G  +E   L+  +  + + P++
Sbjct: 315 QHGRAKEALDLYDQMVLAEIKPNE 338



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H  ++ S      F++N L+ MY++C  ++ AR +F++M  RD++SW SI+   A
Sbjct: 255 LGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAA 314

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G        E   L+  +  +    + +T   L+  C  +G V       G  L   +
Sbjct: 315 QHGRAK-----EALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLV-----SKGRKLFKAM 364

Query: 191 VWDEFVSGAL------VNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGE 242
           + D  +S +L      +++ S+ G + EA+ L   M  + D   W  +L A   +G  E
Sbjct: 365 IEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTE 423


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 217/760 (28%), Positives = 365/760 (48%), Gaps = 88/760 (11%)

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGY--VWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           R       F +  T + + +LC S+G+  +   +  H   L  G V   FVS  L+ +Y+
Sbjct: 18  RPTPAQAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYA 77

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYA----------------------------- 236
           + G    A  +FD M  RD V W  ML AYA                             
Sbjct: 78  RCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSG 137

Query: 237 --ENGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLY 291
             + G   ++  L +++ R G+ PD  ++  +L   G + DL      Q+ A A+K  L 
Sbjct: 138 YCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLAL--GVQIHALAVKTGL- 194

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTF-----------LVAL 339
               +V   +  +  Y +      A+  F  M  R++V + +V             L  L
Sbjct: 195 --EMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELL 252

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS-VLR 398
                   L+  +Q+H   +K+ F S  +VG +++++Y+K   +   R   F L +  + 
Sbjct: 253 CRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVE 312

Query: 399 ASSSL----------PEGLHLSKQIHVHAIKNDTVA----------------DSFVSTAL 432
             +++           E + L + +    I    V+                D  V  A+
Sbjct: 313 TCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAI 372

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D+Y +  ++ EA  +F+  +  D  +WN +I     +      +   + M  SG   D+
Sbjct: 373 LDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADD 432

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
            T  + +KAC  L  L+ G  +H  A+KSG  LD  VSS ++DMY KCG + +A  + + 
Sbjct: 433 FTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDR 492

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           I   + V+W ++I+G   N + + A   + +M   GV PD FT+A ++ + + L  +E G
Sbjct: 493 IGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELG 552

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +QIH  +IK +   D F+  +LVDMYAKCGN+ D+ ++F+++   + V WNAM+ G A H
Sbjct: 553 KQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALH 612

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G G E L++FE  +   V P+  TF+ VL ACS+ GL+ +    FHLM  +Y +EP++EH
Sbjct: 613 GQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEH 672

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           ++ +          +EA + I SMP EA A + + LL  C+++ D E  +  A  ++ L+
Sbjct: 673 FACM--------GPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLD 724

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P DSS Y+LLSN++A + +W DV+  R  M++  +KK+P 
Sbjct: 725 PDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 764



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 191/697 (27%), Positives = 309/697 (44%), Gaps = 84/697 (12%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
           P   ++ F ++++ S  + +   A   S L  G++ HAR+L S  +P  F++N L+ MY+
Sbjct: 19  PTPAQAAFLATATFSHVYQLCASA-GHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYA 77

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAEN---------------VTEG 143
           RCG   +A  +FD MP RD +SWN++L AYAH G+ G A +               +  G
Sbjct: 78  RCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSG 137

Query: 144 F---RLFRSLRE-SITFT------SRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
           +    +FR L   SI          R TLA LLK C     +     +H  A+K GL  D
Sbjct: 138 YCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMD 197

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV---- 249
                ALV++Y K   + +A   F GM ER+ V W  ++    +N        L      
Sbjct: 198 VRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKA 257

Query: 250 --------DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWN 301
                    LH   +     S + V   I D+  + +  V A   +      N  V   N
Sbjct: 258 ITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDAR--RAFFGLPNHTVETCN 315

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK- 360
             + G ++ G    A++ F  M RS + +  V+     +A A     ++   +    L  
Sbjct: 316 AMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDL 375

Query: 361 ----SGFYSAVIV-----------GNSLINMYSKMGCV------------CGLRTDQFTL 393
                    A +V            N++I    +  C              G+  D FT 
Sbjct: 376 YGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTY 435

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
            SVL+A + L + L     +H  AIK+    D+FVS+ ++D+YC+ G + EA  L +   
Sbjct: 436 GSVLKACAGL-QSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIG 494

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
           G +L +WN++I G+ L+  S +A + FS M   G + D  T AT + +C  L  ++ GKQ
Sbjct: 495 GQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQ 554

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   +K     D  +SS ++DMY KCG M D+Q +F  +   D V+W  MI G   +G+
Sbjct: 555 IHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQ 614

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG-RQIH--ANLIKLDCSSDPFV 630
              AL ++ + + + V P+  TF  +++A S +  L+ G R  H   +  KL+   + F 
Sbjct: 615 GFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFA 674

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAML 666
                     C   ++A    + M +  + V+W  +L
Sbjct: 675 ----------CMGPQEALKFIRSMPLEADAVIWKTLL 701



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 28/216 (12%)

Query: 22  SFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILN 81
           S  K +      FS  L   ++  HF+       + ++L    + + + LGK  H +I+ 
Sbjct: 509 SLNKQSEEAQKFFSEMLDMGVKPDHFT-------YATVLDSCANLATIELGKQIHGQIIK 561

Query: 82  SSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
              + D F+++ L+ MY++CG++  ++ +F+K+   D +SWN+++  YA  G+G      
Sbjct: 562 QEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQG-----F 616

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFV 196
           E   +F   +++    +  T   +L+ C     L  G  +       Y L+  L      
Sbjct: 617 EALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQL------ 670

Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                  ++  G     KF+     E D V+WK +L
Sbjct: 671 -----EHFACMGPQEALKFIRSMPLEADAVIWKTLL 701


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 190/581 (32%), Positives = 298/581 (51%), Gaps = 49/581 (8%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+   +  ++  L A +   E + + + I +  +      +S V TAL+ +Y + G   +
Sbjct: 71  GINPGEVGISIFLSACTDARE-ITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTD 129

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F      D+  W+AM+  Y  + +  +AL LF  M   G   +++T+ + + AC  
Sbjct: 130 AASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACAS 189

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  L+ G  MH      G +  + V + ++++Y KCG +  A   F  I   + VAW+ +
Sbjct: 190 LGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAI 249

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD- 623
            +    N     A+ + H+M L G+ P+  TF  ++ A + + AL+QGR+IH  +  L  
Sbjct: 250 SAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGG 309

Query: 624 -CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              SD +V  +LV+MY+KCGN+  A  +F ++   + VLWN+++   AQHG  E+ L+LF
Sbjct: 310 GLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELF 369

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           E M+  G++P  +TF  VL ACS+ G++ +  ++F      +GI PE EH+  +VD LGR
Sbjct: 370 ERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGR 429

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG   ++ +L+L MPFE       A LGACR   + +   W AE L  L+P   + YVLL
Sbjct: 430 AGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLL 489

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADL-------IFAKV 839
           SN++A A +W DV   R  M+     K+                  DL       I A++
Sbjct: 490 SNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAEL 549

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
           + L K +K  GYVPDT+ VL DV++E KE  + YHSEKLA A+ L++TP  S I      
Sbjct: 550 QRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNL 609

Query: 894 ---------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                          L N+E +    NRFH  ++G C C D
Sbjct: 610 RVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGD 650



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 177/391 (45%), Gaps = 7/391 (1%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           + + F+   LID+Y +     +A  +F      ++ +W  M+  +  + +  +    F  
Sbjct: 7   IRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRG 66

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G    E+ I+  + AC     +  G+ +    + +G E +  V + ++ +Y K G 
Sbjct: 67  MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGH 126

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
             DA S+F  +   D VAW+ M++    NG    AL ++ QM L GV P++ T    + A
Sbjct: 127 CTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDA 186

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            + L  L  G  +H  +      S   VG +LV++Y KCG IE A   F Q+  +N V W
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA---YENFHL 719
           +A+    A++    + +++   M   G+ P+S TF+ VL AC+    + +    +E  H+
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHV 306

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
           +    G+E +V   + LV+   + G    AG +   +       +  +L+      G TE
Sbjct: 307 L--GGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQTE 363

Query: 780 TGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
               + E+ M LE    +     S +FA ++
Sbjct: 364 KALELFER-MRLEGLQPTIITFTSVLFACSH 393



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 191/458 (41%), Gaps = 77/458 (16%)

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           ++G + + F+   L+++Y+K  +  +A  +F G+Q ++V  W +ML A+AEN   +  + 
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISD--------------LGKRHEEQ--VQAYAIKL-- 288
            F  +   G+ P +  +   L   +D              LG   EE+  VQ   + L  
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 289 -----------LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
                       L  ++ +VV W+  ++ Y + G    A+  F  M    V  + VT + 
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-------------- 383
            L A A   +L  G  +H      G  S V+VG +L+N+Y K G +              
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 384 -----------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
                                         GL  +  T  SVL A +++   L   ++IH
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIA-ALKQGRRIH 301

Query: 415 --VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
             +H +     +D +V TAL+++Y + G++A A  +F+     DL  WN++I        
Sbjct: 302 ERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQ 361

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSS 531
           + KALELF  M   G +   IT  + + AC    ML QG K   ++    G   +     
Sbjct: 362 TEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFG 421

Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            ++D+  + G +VD++ +   +P  P  VAW   +  C
Sbjct: 422 CMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGAC 459



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 137/317 (43%), Gaps = 36/317 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++ +G+S    IL +    +  +   L+++Y + G    A  +F +M  RD+++W++++A
Sbjct: 91  EITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVA 150

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AYA +G     +  E   LFR +       +++TL   L  C S G + +   +H     
Sbjct: 151 AYARNG-----HPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEA 205

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G+     V  ALVN+Y K G+I  A   F  + E++VV W  +  AYA N    +   +
Sbjct: 206 QGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRV 265

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDL-----GKRHEEQVQ---------AYAIKLL--LY 291
              +   GL P+  +   VL   + +     G+R  E++           Y +  L  +Y
Sbjct: 266 LHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMY 325

Query: 292 NNNSN---------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
           +   N               +VLWN  ++   Q G    A+E F  M    +Q   +TF 
Sbjct: 326 SKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFT 385

Query: 337 VALAAVAGTDNLNLGQQ 353
             L A +    L+ G++
Sbjct: 386 SVLFACSHAGMLDQGRK 402



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 50  SSSSSQWFSILRHAISTSDLLLGKSTHARI--LNSSQIPDRFLTNNLMTMYSRCGSLVYA 107
           + +S+ + S+L    + + L  G+  H RI  L      D ++   L+ MYS+CG+L  A
Sbjct: 275 APNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALA 334

Query: 108 RRLFDKMPDRDLISWNSILAAYAHSGEG-NAENVTEGFRLFRSLRESITFTSRL 160
             +FDK+   DL+ WNS++A  A  G+   A  + E  RL       ITFTS L
Sbjct: 335 GNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVL 388


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 185/580 (31%), Positives = 298/580 (51%), Gaps = 54/580 (9%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R D  T    L A + L + L   + +   A       D FV ++L+ +Y R G+M +A 
Sbjct: 105 RPDSTTFTLALSACARLGD-LRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAV 163

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F      D  TW+ M+ G++ +     A++++  M   G + DE+ +   ++AC    
Sbjct: 164 KVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAAR 223

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++ G  +H + ++ G  +D+  ++ ++DMY K G +  A  +F  +   +DV+W+ MIS
Sbjct: 224 NVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMIS 283

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LD 623
           G   NG+ D AL ++  M+ SG+ PD       + A S +  L+ GR +H  +++    +
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFN 343

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
           C     +G + +DMY+KCG++  A +LF  +  R+ +LWNAM+     HG G++ L LF+
Sbjct: 344 C----ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQ 399

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           +M   G+ PD  TF  +LSA S++GLV E    F  M   + I P  +HY  LVD L R+
Sbjct: 400 EMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARS 459

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  +EA +L+ SM  E + ++  ALL  C      E G+ +A+ ++ L+P D     L+S
Sbjct: 460 GLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVS 519

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           N++AA  +WD V   R  MK    KK P                        + I +KV 
Sbjct: 520 NLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVA 579

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN-- 896
            L   +++ GY+P T+FV  D+EEE KE+ L YHSE+LA A+GL++T P +  VI+ N  
Sbjct: 580 KLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLR 639

Query: 897 -----------------KEPLY--ANRFHHLRDGMCPCAD 917
                            +E +   A RFHH +DG+C C D
Sbjct: 640 VCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRD 679



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 194/418 (46%), Gaps = 50/418 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+S   R  ++    D F+ ++L+ +Y+R G++  A ++F +MP RD ++W++++A
Sbjct: 123 DLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVA 182

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            +  +G+       +  +++R +RE       + +  +++ C ++  V    +VHG+ L+
Sbjct: 183 GFVSAGQP-----LDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLR 237

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G+  D   + +LV++Y+K G +  A  +F  M  R+ V W  M+  +A+NG  +E   L
Sbjct: 238 HGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRL 297

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           F ++  SG+ PD  ++   L   S++G  +    V  + ++   +    N +L    +  
Sbjct: 298 FRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF----NCILGTAAIDM 353

Query: 307 YLQVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           Y + G    A   F NMI  R  + ++++      A   G D L L Q+++ T       
Sbjct: 354 YSKCGSLASAQMLF-NMISDRDLILWNAMIACCG-AHGRGQDALTLFQEMNET------- 404

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA--SSSLPEGLHLSKQIHVHAIKNDT 422
                               G+R D  T AS+L A   S L E   L     V+  K   
Sbjct: 405 --------------------GMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITP 444

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFGYILSNNSHKALEL 479
               +V   L+D+  R+G + EA  L  + K    +A W A++ G +  NN  K LEL
Sbjct: 445 AEKHYV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCL--NN--KKLEL 496



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 137/286 (47%), Gaps = 25/286 (8%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
             +++   +  ++ +G S H  +L      D     +L+ MY++ G L  A R+F  M  
Sbjct: 213 IGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVH 272

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+ +SW+++++ +A +G+ +     E  RLFR+++ S        L   L  C + G++ 
Sbjct: 273 RNDVSWSAMISGFAQNGQSD-----EALRLFRNMQASGIQPDSGALVSALLACSNIGFLK 327

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
              +VHG+ ++    ++  +  A +++YSK G +  A+ LF+ + +RD++LW  M+    
Sbjct: 328 LGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCG 386

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSN 296
            +G G++   LF +++ +G+ PD  +   +L  +S  G   E +                
Sbjct: 387 AHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGK---------------- 430

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAA 341
             LW  ++  + ++        C V+++ RS +  ++   L ++ A
Sbjct: 431 --LWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKA 474



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 195/492 (39%), Gaps = 117/492 (23%)

Query: 131 HSGEGNAENVTEGFRLFRSLR-----ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           HS  G+  +     R+FR+L      +S TFT    LA  L  C   G +   E+V   A
Sbjct: 84  HSRRGSPAS---ALRVFRALPPAARPDSTTFT----LA--LSACARLGDLRGGESVRDRA 134

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
              G   D FV  +L+++Y+++G + +A  +F  M  RD V W  M+  +   G   +  
Sbjct: 135 FDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAI 194

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVIS--------DLGK-------RHEEQVQAYAIKLL- 289
            ++  +   G+   DE V  ++GVI          +G        RH  ++       L 
Sbjct: 195 QMYRRMREDGV-KGDEVV--MIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLV 251

Query: 290 -LYNNNS---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y  N                N V W+  +SG+ Q G +  A+  F NM  S +Q DS 
Sbjct: 252 DMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSG 311

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
             + AL A +    L LG+ +HG  ++  F    I+G + I+MYSK G +          
Sbjct: 312 ALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLA--------- 361

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--N 451
                           S Q+  + I +    D  +  A+I     +G   +A  LF+  N
Sbjct: 362 ----------------SAQMLFNMISD---RDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 452 KDGF--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           + G   D AT     F  +LS  SH  L     +   G  ++   I  A K   CL    
Sbjct: 403 ETGMRPDHAT-----FASLLSALSHSGLVEEGKLWF-GRMVNHFKITPAEKHYVCL---- 452

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
                          +DL   SG+++         +A  +   + A   VA W  ++SGC
Sbjct: 453 ---------------VDLLARSGLVE---------EASDLLTSMKAEPTVAIWVALLSGC 488

Query: 569 VDNGEEDLALSI 580
           ++N + +L  SI
Sbjct: 489 LNNKKLELGESI 500


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 185/580 (31%), Positives = 298/580 (51%), Gaps = 54/580 (9%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R D  T    L A + L + L   + +   A       D FV ++L+ +Y R G+M +A 
Sbjct: 105 RPDSTTFTLALSACARLGD-LRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAV 163

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F      D  TW+ M+ G++ +     A++++  M   G + DE+ +   ++AC    
Sbjct: 164 KVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAAR 223

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
            ++ G  +H + ++ G  +D+  ++ ++DMY K G +  A  +F  +   +DV+W+ MIS
Sbjct: 224 NVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMIS 283

Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LD 623
           G   NG+ D AL ++  M+ SG+ PD       + A S +  L+ GR +H  +++    +
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFN 343

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
           C     +G + +DMY+KCG++  A +LF  +  R+ +LWNAM+     HG G++ L LF+
Sbjct: 344 C----ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQ 399

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
           +M   G+ PD  TF  +LSA S++GLV E    F  M   + I P  +HY  LVD L R+
Sbjct: 400 EMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARS 459

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  +EA +L+ SM  E + ++  ALL  C      E G+ +A+ ++ L+P D     L+S
Sbjct: 460 GLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVS 519

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           N++AA  +WD V   R  MK    KK P                        + I +KV 
Sbjct: 520 NLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVA 579

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN-- 896
            L   +++ GY+P T+FV  D+EEE KE+ L YHSE+LA A+GL++T P +  VI+ N  
Sbjct: 580 KLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLR 639

Query: 897 -----------------KEPLY--ANRFHHLRDGMCPCAD 917
                            +E +   A RFHH +DG+C C D
Sbjct: 640 VCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRD 679



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 194/418 (46%), Gaps = 50/418 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  G+S   R  ++    D F+ ++L+ +Y+R G++  A ++F +MP RD ++W++++A
Sbjct: 123 DLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVA 182

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            +  +G+       +  +++R +RE       + +  +++ C ++  V    +VHG+ L+
Sbjct: 183 GFVSAGQ-----PLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLR 237

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            G+  D   + +LV++Y+K G +  A  +F  M  R+ V W  M+  +A+NG  +E   L
Sbjct: 238 HGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRL 297

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
           F ++  SG+ PD  ++   L   S++G  +    V  + ++   +    N +L    +  
Sbjct: 298 FRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF----NCILGTAAIDM 353

Query: 307 YLQVGDNHGAIECFVNMI--RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY 364
           Y + G    A   F NMI  R  + ++++      A   G D L L Q+++ T       
Sbjct: 354 YSKCGSLASAQMLF-NMISDRDLILWNAMIACCG-AHGRGQDALTLFQEMNET------- 404

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA--SSSLPEGLHLSKQIHVHAIKNDT 422
                               G+R D  T AS+L A   S L E   L     V+  K   
Sbjct: 405 --------------------GMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITP 444

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFGYILSNNSHKALEL 479
               +V   L+D+  R+G + EA  L  + K    +A W A++ G +  NN  K LEL
Sbjct: 445 AEKHYV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCL--NN--KKLEL 496



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 137/286 (47%), Gaps = 25/286 (8%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
             +++   +  ++ +G S H  +L      D     +L+ MY++ G L  A R+F  M  
Sbjct: 213 IGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVH 272

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           R+ +SW+++++ +A +G+ +     E  RLFR+++ S        L   L  C + G++ 
Sbjct: 273 RNDVSWSAMISGFAQNGQSD-----EALRLFRNMQASGIQPDSGALVSALLACSNIGFLK 327

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
              +VHG+ ++    ++  +  A +++YSK G +  A+ LF+ + +RD++LW  M+    
Sbjct: 328 LGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCG 386

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSN 296
            +G G++   LF +++ +G+ PD  +   +L  +S  G   E +                
Sbjct: 387 AHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGK---------------- 430

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAA 341
             LW  ++  + ++        C V+++ RS +  ++   L ++ A
Sbjct: 431 --LWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKA 474



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 195/492 (39%), Gaps = 117/492 (23%)

Query: 131 HSGEGNAENVTEGFRLFRSLR-----ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           HS  G+  +     R+FR+L      +S TFT    LA  L  C   G +   E+V   A
Sbjct: 84  HSRRGSPASA---LRVFRALPPAARPDSTTFT----LA--LSACARLGDLRGGESVRDRA 134

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
              G   D FV  +L+++Y+++G + +A  +F  M  RD V W  M+  +   G   +  
Sbjct: 135 FDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAI 194

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVIS--------DLGK-------RHEEQVQAYAIKLL- 289
            ++  +   G+   DE V  ++GVI          +G        RH  ++       L 
Sbjct: 195 QMYRRMREDGV-KGDEVV--MIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLV 251

Query: 290 -LYNNNS---------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +Y  N                N V W+  +SG+ Q G +  A+  F NM  S +Q DS 
Sbjct: 252 DMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSG 311

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
             + AL A +    L LG+ +HG  ++  F    I+G + I+MYSK G +          
Sbjct: 312 ALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLA--------- 361

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--N 451
                           S Q+  + I +    D  +  A+I     +G   +A  LF+  N
Sbjct: 362 ----------------SAQMLFNMISDR---DLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 452 KDGF--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
           + G   D AT     F  +LS  SH  L     +   G  ++   I  A K   CL    
Sbjct: 403 ETGMRPDHAT-----FASLLSALSHSGLVEEGKLWF-GRMVNHFKITPAEKHYVCL---- 452

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGC 568
                          +DL   SG+++         +A  +   + A   VA W  ++SGC
Sbjct: 453 ---------------VDLLARSGLVE---------EASDLLTSMKAEPTVAIWVALLSGC 488

Query: 569 VDNGEEDLALSI 580
           ++N + +L  SI
Sbjct: 489 LNNKKLELGESI 500


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 233/794 (29%), Positives = 379/794 (47%), Gaps = 45/794 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           L K    S+S    + ++LR   +   L  G+  HA I++     +  L   +  MY+RC
Sbjct: 39  LDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARC 98

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
                A  LFD MPDR    WN ++  +       A+   +   L+R +    T  S   
Sbjct: 99  RCFDTAIALFDAMPDRRPFCWNVLMKEFL-----AADRPRDTLELYRRMSVENTQPSACG 153

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
               +  C     +    ++H Y +  G   +  +  ALV +Y++ G+I  A   FD  +
Sbjct: 154 FMWAIVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNR 212

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
           E     W  ++ A A  G       LF  + +   C D      +    +    R   Q+
Sbjct: 213 ELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQ-CSDRSCAIALGACAAAGHLRGGIQI 271

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                K+    + + V++ N  +S Y++ G    A+  F +M   NV    V++   +AA
Sbjct: 272 HD---KIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNV----VSWTSMIAA 324

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYS-AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
           VA                +SG YS AV + + +I          G+  ++ T ASV+ A 
Sbjct: 325 VA----------------QSGHYSFAVKLFDGMIAE--------GINPNEKTYASVVSAI 360

Query: 401 SSLPEG--LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGFD 456
           + L     L   ++IH     +   AD  V  +LI++Y R+G +AEA  +F++  ++   
Sbjct: 361 AHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKT 420

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
           + ++  MI  Y  + +  +ALE+F  M   G   +EIT AT + AC  +  L  G  +H 
Sbjct: 421 VVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHE 480

Query: 517 YAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
             ++SG +  D    + ++DMY KCG +  A  +F  +   D VAWTT+I+  V +G   
Sbjct: 481 RMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNR 540

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
            AL +Y +M  SG+ PD  T + L+ A + L  L  G +IH   ++     D     +L 
Sbjct: 541 AALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALA 600

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
            MYAKCG++E A  L+++    +   W +ML   +Q G     L+L+ +M++ GV P+ V
Sbjct: 601 AMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEV 660

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
           TFI VL +CS  GLV+E  E FH +   YG +P  EH+  +VD LGRAG+ ++A EL+ S
Sbjct: 661 TFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDS 720

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
           MPF       ++LL +C++  D E G   AE L+ L+P  +S +V LS I+AAA +  D+
Sbjct: 721 MPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDI 780

Query: 816 TSARGEMK-RKNVK 828
              + E+  R+ ++
Sbjct: 781 DEIKRELALRRQIE 794


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 211/707 (29%), Positives = 343/707 (48%), Gaps = 93/707 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG-TT 358
           W   L+ Y Q G    A++ +  M   ++Q + V +   L A A  + L  G+ IH   +
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRIS 148

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV----------CGLRT-------------------- 388
              G    VI+ NSL+ MY+K G +           G R+                    
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208

Query: 389 -----------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
                         T  SVL A S+L   L   ++IH       T  D  +  AL+ +Y 
Sbjct: 209 IRLYEDMDVEPSVRTFTSVLSACSNLGL-LDQGRKIHALISSRGTELDLSLQNALLTMYA 267

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           R   + +A  +F+     D+ +W+AMI  +  ++   +A+E +S M   G R +  T A+
Sbjct: 268 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 327

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            + AC  +  L+ G+ +H   + +G+++ L   + ++D+Y   G++ +A+S+F+ I   D
Sbjct: 328 VLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRD 387

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIH 616
           +  WT +I G    G     L +Y +M+ +  VP  +  ++ ++ A + L A    RQ H
Sbjct: 388 EGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAH 447

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
           +++      SD  +  SLV+MY++ GN+E A  +F +M  R+T+ W  ++ G A+HG   
Sbjct: 448 SDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHG 507

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
             L L+++M+  G EP  +TF+ VL ACS+ GL  +  + F  ++  Y + P + HYS +
Sbjct: 508 LALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCI 567

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           +D L RAGR  +A ELI +MP E +     +LLGA R+  D +     A ++  L+P D 
Sbjct: 568 IDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDP 627

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK-------DPADL--------------- 834
           ++YVLLSN+ A       + S R  M  + VKK       + AD                
Sbjct: 628 ASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQ 687

Query: 835 -IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI 893
            IFA+++ L  +IKE GYVP+++ VL DV E+EKE  L  HSEKLA A+GLI+T P + +
Sbjct: 688 EIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTL 747

Query: 894 ---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                                ++ +E +   ++RFH  RDG C C D
Sbjct: 748 RIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGD 794



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 140/621 (22%), Positives = 256/621 (41%), Gaps = 107/621 (17%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R+L    +      ++   S   SS  +   LR      DL   +  H RI  ++   + 
Sbjct: 3   RSLAPAKVRRFQLKEEKAGSRFDSSGHYRDALRQC---QDLESVRQIHDRISGAAS-ANV 58

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FL N ++  Y +CGS+  AR  FD +  ++  SW S+L AYA +G               
Sbjct: 59  FLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGH-------------- 104

Query: 149 SLRESITFTSRLTLAP-------LLKLCLSSGYVWASETVHG-YALKIGLVWDEFVSGAL 200
             R ++    R+ L P       +L  C S   +   + +H   +   GL  D  +  +L
Sbjct: 105 -YRAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSL 163

Query: 201 VNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           + +Y+K G + +AK LF+ M   R V  W  M+ AYA++G  EE   L+ D+    + P 
Sbjct: 164 LTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPS 220

Query: 260 DESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNS------------------- 295
             +   VL   S+L     G++    + +   +L L   N+                   
Sbjct: 221 VRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQ 280

Query: 296 -----NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
                +VV W+  ++ + +      AIE +  M    V+ +  TF   L A A   +L  
Sbjct: 281 RLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRA 340

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
           G+ +H   L +G+   ++ G +L+++Y+  G +                           
Sbjct: 341 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 400

Query: 384 CGLRTDQFTLASVLRASSSLPE----------------GLHLSKQIHVHAIKNDTVADSF 427
            G RT    L   ++ ++ +P                     ++Q H     +  ++D  
Sbjct: 401 QGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV 460

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           ++T+L+++Y R G++  A  +F+     D   W  +I GY        AL L+  M   G
Sbjct: 461 LATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEG 520

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVD 545
               E+T    + AC    + +QGKQ+   +++S + +   ++  S I+D+  + G + D
Sbjct: 521 AEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 579

Query: 546 AQSIFNDIPA-PDDVAWTTMI 565
           A+ + N +P  P+DV W++++
Sbjct: 580 AEELINAMPVEPNDVTWSSLL 600



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE  RQIH + I    S++ F+G  +V  Y KCG++  A + F  +  +N   W +ML  
Sbjct: 40  LESVRQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTA 98

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQ+G+    L L++ M    ++P+ V +  VL AC+    + E       +    G++ 
Sbjct: 99  YAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKL 155

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +V   + L+    + G  ++A  L   M    S S   A++ A    G  E    + E  
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYED- 214

Query: 789 MALEP 793
           M +EP
Sbjct: 215 MDVEP 219



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
            +  H+ I     I D  L  +L+ MYSR G+L  AR++FDKM  RD ++W +++A YA 
Sbjct: 443 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 502

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            GE           L++ +       S LT   +L  C  +G         G  L I + 
Sbjct: 503 HGEHGL-----ALGLYKEMELEGAEPSELTFMVVLYACSHAGL-----QEQGKQLFISIQ 552

Query: 192 WDEFVS------GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            D  +         ++++ S+ G++ +A+ L + M  E + V W  +L A
Sbjct: 553 SDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA 602


>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 681

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 227/709 (32%), Positives = 330/709 (46%), Gaps = 76/709 (10%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA--LVNIYSKFG-KIREAKFLF 217
           +LA LL+   +   +   + +H   LK GL+ +  VS A  L+ +Y++ G  + +A  LF
Sbjct: 7   SLARLLQSLNTHSSIHQGKQLHLLFLKKGLI-NATVSLANRLLQMYARCGGTMTDAHNLF 65

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH 277
           D M ER+   W  M+  Y   G  E    LF       L P        + VIS   K  
Sbjct: 66  DEMPERNCFSWNTMIEGYMRVGDKERSLKLF------DLMPQKNDYSWNV-VISGFAKAG 118

Query: 278 EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY---DSVT 334
           E  V   A KL       N V WN  + GY + G    A+  F  +  + ++    D+  
Sbjct: 119 ELDV---AKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFV 175

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
               + A A    +  G+Q+H   L        ++ +SLIN+Y+K G             
Sbjct: 176 LASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCG------------- 222

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
                        HL    +V  + ++   D F  +ALI  Y   G M++A  +F  K  
Sbjct: 223 -------------HLDTANYVLKMMDEV--DDFSLSALIMGYANCGRMSDAVRIFRTKSN 267

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
                WN++I GY+ ++   KA  L + M  +  ++D  TI   + AC      +  KQM
Sbjct: 268 PCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQM 327

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKC-------------------------------GAM 543
           H Y  K G    + V+S  +D Y KC                               G +
Sbjct: 328 HGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRI 387

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
            DA++IF  +P+   ++W ++I G   N     AL ++ +M    +  D F+ A ++ A 
Sbjct: 388 RDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISAC 447

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
           +C+++LE G Q+ A  I     SD  V  SLVD Y KCG IE+   LF  M   + V WN
Sbjct: 448 ACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWN 507

Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           +ML+G A +G G ETL LF +MK  G+ P  +TF GVLSAC + GLV E  + F++M+  
Sbjct: 508 SMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYD 567

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           Y I+P +EHYS +VD   RAG  KEA  L+  MPFEA  SM  ++L  C   GD + GK 
Sbjct: 568 YHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKK 627

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           VA++++ L P  SSAYV LS IFA +  W+     R  M  K VKK P 
Sbjct: 628 VAQQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMTEKQVKKHPG 676



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 183/695 (26%), Positives = 314/695 (45%), Gaps = 161/695 (23%)

Query: 65  STSDLLLGKSTHARILNSSQIPDRFL-----------TNNLMTMYSRCG-SLVYARRLFD 112
           S + LL   +TH+ I    Q+   FL            N L+ MY+RCG ++  A  LFD
Sbjct: 7   SLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFD 66

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           +MP+R+  SWN+++  Y   G+          +LF  + +   ++               
Sbjct: 67  EMPERNCFSWNTMIEGYMRVGDKE-----RSLKLFDLMPQKNDYS--------------- 106

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
                              W+  +SG     ++K G++  AK LF+ M  R+ V W  M+
Sbjct: 107 -------------------WNVVISG-----FAKAGELDVAKKLFNEMPRRNGVAWNSMI 142

Query: 233 RAYAENGFGEEVFHLFVDLHRSGL---CPDDESVQCVLGVISDLGK-RHEEQVQA----- 283
             YA NGF  E   LF +L+ + L   C D   +  V+G  +DLG   + +QV A     
Sbjct: 143 HGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMD 202

Query: 284 --------------------------YAIKLL--------------------------LY 291
                                     Y +K++                          ++
Sbjct: 203 DVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIF 262

Query: 292 NNNSN--VVLWNKKLSGYLQVGDNHGAIECF--VNMIRSN-VQYDSVTFLVALAAVAGTD 346
              SN   V+WN  +SGY+   +NH  ++ F  VN +++N VQ DS T  V L+A + T 
Sbjct: 263 RTKSNPCFVVWNSLISGYV---NNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTG 319

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           N    +Q+HG   K G   +VIV ++ I+ YSK    C    D   L S L+A       
Sbjct: 320 NAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSK----CRNPNDACKLFSELKA------- 368

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
                             D+ +  ++I  YC  G + +A+ +FE      L +WN++I G
Sbjct: 369 -----------------YDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVG 411

Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
              +    +AL++F  M+    R+D  ++A+ + AC C+  L+ G+Q+ A A+ +G E D
Sbjct: 412 LAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESD 471

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRL 586
             VS+ ++D Y KCG + + + +F+ +   D+V+W +M+ G   NG     L+++++M+ 
Sbjct: 472 QAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQ 531

Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS----LVDMYAKCG 642
           +G+ P + TF  ++ A      +E+GR+   N++K D   DP  GI     +VD++A+ G
Sbjct: 532 AGLRPTDITFTGVLSACDHCGLVEEGRKWF-NIMKYDYHIDP--GIEHYSCMVDLFARAG 588

Query: 643 NIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
            +++A  L + M    +  +W+++L G   HG+ +
Sbjct: 589 CLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKD 623



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 18/204 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      S L LG+   AR + +    D+ ++ +L+  Y +CG +   R+LFD M   
Sbjct: 442 SVISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKT 501

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           D +SWNS+L  YA +G G      E   LF  ++++    + +T   +L  C   G V  
Sbjct: 502 DEVSWNSMLMGYATNGYG-----LETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEE 556

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
              W +   + Y +  G+   E  S  +V+++++ G ++EA  L + M  E D  +W  +
Sbjct: 557 GRKWFNIMKYDYHIDPGI---EHYS-CMVDLFARAGCLKEALNLVEHMPFEADCSMWSSV 612

Query: 232 LR---AYAENGFGEEVFHLFVDLH 252
           LR   A+ +   G++V    + L+
Sbjct: 613 LRGCVAHGDKDLGKKVAQQIIQLN 636


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 205/627 (32%), Positives = 327/627 (52%), Gaps = 60/627 (9%)

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
           D +     +   TL SG+  A     +++ ++ +M  + G   D FTL+ ++ A     +
Sbjct: 98  DEIPQPDTVSYNTLISGYADARETFAAMV-LFKRMRKL-GFEVDGFTLSGLIAACC---D 152

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF-DLATWNAMI 464
            + L KQ+H  ++     + S V+ A +  Y + G + EA  +F   D   D  +WN+MI
Sbjct: 153 RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMI 212

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
             Y       KAL L+  M   G ++D  T+A+ + A   L  L  G+Q H   +K+GF 
Sbjct: 213 VAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFH 272

Query: 525 LDLCVSSGILDMYVKCGA---MVDAQSIFNDIPAPDDVAWTTMISGCVDNGE-EDLALSI 580
            +  V SG++D Y KCG    M D++ +F +I +PD V W TMISG   N E  + A+  
Sbjct: 273 QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKS 332

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF-VGISLVDMYA 639
           + QM+  G  PD+ +F  +  A S L++  Q +QIH   IK    S+   V  +L+ +Y 
Sbjct: 333 FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           K GN++DA  +F +M   N V +N M+ G AQHG+G E L L++ M   G+ P+ +TF+ 
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           VLSAC++ G V E  E F+ M+E + IEPE EHYS ++D LGRAG+ +EA   I +MP++
Sbjct: 453 VLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
             +    ALLGACR   +    +  A +LM ++P  ++ YV+L+N++A A +W+++ S R
Sbjct: 513 PGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVR 572

Query: 820 GEMKRKNVKKDPA---------DLIFAK--------------VEGLIKRIKEGGYVPDTD 856
             M+ K ++K P            +F                +E ++K++K+ GYV D  
Sbjct: 573 KSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKK 632

Query: 857 FVLLDVEEEEKERA---LYYHSEKLARAYGLISTPPSS--VILSN--------------- 896
           + ++  +E  +      L +HSEKLA A+GL+ST      V++ N               
Sbjct: 633 WAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMS 692

Query: 897 ----KEPLYAN--RFHHLRDGMCPCAD 917
               +E +  +  RFH  +DG C C D
Sbjct: 693 AVAGREIIVRDNLRFHCFKDGKCSCGD 719



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 36/372 (9%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           L +VA  D L  G+ +H   +KS   S+  + N  +N+YSK G        + + A    
Sbjct: 16  LKSVAERD-LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCG--------RLSYARAAF 66

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
            S+  P                    + F    ++  Y ++  +  A  LF+     D  
Sbjct: 67  YSTEEP--------------------NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           ++N +I GY  +  +  A+ LF  M   G  +D  T++  + AC   + L   KQ+H ++
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFS 164

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
           +  GF+    V++  +  Y K G + +A S+F  +    D+V+W +MI     + E   A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L++Y +M   G   D FT A ++ A + L  L  GRQ H  LIK     +  VG  L+D 
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDF 284

Query: 638 YAKCGNIE---DAYILFKQMDMRNTVLWNAMLVGLAQHGN-GEETLKLFEDMKAHGVEPD 693
           Y+KCG  +   D+  +F+++   + V+WN M+ G + +    EE +K F  M+  G  PD
Sbjct: 285 YSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPD 344

Query: 694 SVTFIGVLSACS 705
             +F+ V SACS
Sbjct: 345 DCSFVCVTSACS 356



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 236/591 (39%), Gaps = 142/591 (24%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY------------ 106
           +L  +++  DL  GKS HA  + S      +L+N+ + +YS+CG L Y            
Sbjct: 14  LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73

Query: 107 -------------------ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
                              AR+LFD++P  D +S+N++++ YA + E  A  V     LF
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV-----LF 128

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
           + +R+        TL+ L+  C     V   + +H +++  G      V+ A V  YSK 
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186

Query: 208 GKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
           G +REA  +F GM E RD V W  M+ AY ++  G +   L+ ++   G   D  ++  V
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246

Query: 267 LGVISDL----GKRHEEQVQAYAIKLLLYNN----------------------------- 293
           L  ++ L    G R   Q     IK   + N                             
Sbjct: 247 LNALTSLDHLIGGR---QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303

Query: 294 --NSNVVLWNKKLSGY-LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
             + ++V+WN  +SGY +    +  A++ F  M R   + D  +F+   +A +   + + 
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 363

Query: 351 GQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
            +QIHG  +KS   S  I V N+LI++Y K G           L         +PE    
Sbjct: 364 CKQIHGLAIKSHIPSNRISVNNALISLYYKSG----------NLQDARWVFDRMPE---- 409

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
                ++A+       SF    +I  Y ++G   EA                        
Sbjct: 410 -----LNAV-------SF--NCMIKGYAQHGHGTEA------------------------ 431

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
                  L L+  M  SG   ++IT    + AC     + +G Q +   MK  F+++   
Sbjct: 432 -------LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEA 483

Query: 530 S--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
              S ++D+  + G + +A+   + +P  P  VAW  ++  C  +    LA
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 112/227 (49%), Gaps = 8/227 (3%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDKM 114
           S+L    S   L+ G+  H +++ +    +  + + L+  YS+CG    +  + ++F ++
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304

Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
              DL+ WN++++ Y+     N E   E  + FR ++         +   +   C +   
Sbjct: 305 LSPDLVVWNTMISGYSM----NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360

Query: 175 VWASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
               + +HG A+K  +  +   V+ AL+++Y K G +++A+++FD M E + V +  M++
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            YA++G G E   L+  +  SG+ P+  +   VL   +  GK  E Q
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQ 467



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 32/147 (21%)

Query: 590 VPDEF-TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI---- 644
            P +F TF  L+  S     L  G+ +HA  +K   +S  ++    V++Y+KCG +    
Sbjct: 4   TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63

Query: 645 ----------------------EDAYI-----LFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
                                 +D+ I     LF ++   +TV +N ++ G A       
Sbjct: 64  AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSAC 704
            + LF+ M+  G E D  T  G+++AC
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAAC 150


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 191/586 (32%), Positives = 301/586 (51%), Gaps = 80/586 (13%)

Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
           ++H   IK      S +S  L+DVY + G + +A  LF+     D  +W +++  +  + 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 472 NSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
              + L + + M T  G + D    A  V+AC  L  L+ GKQ+HA  M S F  D  V 
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE----DLAL-------- 578
           S ++DMY KCG   +A+++F+ I   + V+WT+MISG   +G +    DL L        
Sbjct: 144 SSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203

Query: 579 -------------------SIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGRQIHAN 618
                              S++++MR  G+ + D    + +V   + L  LE G+QIH  
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263

Query: 619 LIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
           +I L   S  F+  +LVDMYAKC +I  A  +F +M  ++ + W +++VG AQHG  EE 
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEA 323

Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
           L L+++M    ++P+ VTF+G+L ACS+ GLVS   E F  M   Y I P ++HY+ L+D
Sbjct: 324 LTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLD 383

Query: 739 ALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSA 798
            L R+G   EA  L+  +PF+       +LL AC    + E G  +A++++ L+P D S 
Sbjct: 384 LLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPST 443

Query: 799 YVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--ADLIFAK------------------ 838
           Y+LLSN++A A  W  V+  R  M    V+K+P  + + F K                  
Sbjct: 444 YILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNE 503

Query: 839 ----VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
               ++ L   +++ GYVP+T FVL D+E++EKE+ L++HSE+LA AYGL+   P ++I 
Sbjct: 504 ICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIR 563

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                               +  +E +   A R+HH ++G C C D
Sbjct: 564 IVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCND 609



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 122/535 (22%), Positives = 222/535 (41%), Gaps = 123/535 (22%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H++I+ +       L+N L+ +Y +CG +  A +LFD+MP+RD +SW SIL A+      
Sbjct: 26  HSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAH------ 79

Query: 136 NAENVTEGFRLFRSLRESITF----TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           N   +    R    L    T           A +++ C S GY+   + VH   +     
Sbjct: 80  NKALIPR--RTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFC 137

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            DE V  +L+++Y+K G+  EA+ +FD +  ++ V W  M+  YA +G   E   LF   
Sbjct: 138 DDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLF--- 194

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
                                        +QA            N+  W   +SG +Q G
Sbjct: 195 -----------------------------LQAPV---------RNLFSWTALISGLIQSG 216

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN---LNLGQQIHGTTLKSGFYSAVI 368
               +   F  M R  +  D V  LV  + V G  N   L LG+QIHG  +  GF S + 
Sbjct: 217 HGIYSFSLFNEMRREGI--DIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           + N+L++MY+K              + +L A           K I     + D ++    
Sbjct: 275 ISNALVDMYAK-------------CSDILAA-----------KDIFYRMPRKDVIS---- 306

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            T++I    ++G   EA           L  ++ M+   I  N                 
Sbjct: 307 WTSIIVGTAQHGKAEEA-----------LTLYDEMVLSRIKPN----------------- 338

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDA 546
              E+T    + AC    ++ +G+++   +M + + ++  +   + +LD+  + G + +A
Sbjct: 339 ---EVTFVGLLYACSHAGLVSRGRELFR-SMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           +++ + IP  PD+  W +++S C+ +   ++ + I    R+  + P++ +  IL+
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIAD--RVLDLKPEDPSTYILL 447



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 40/277 (14%)

Query: 31  LPSFSLSLLPF------LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQ 84
           +P  +LS+L        LQ  HF        +  I+R   S   L LGK  HAR + S  
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFV-------FACIVRACSSLGYLRLGKQVHARFMLSXF 136

Query: 85  IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG----------E 134
             D  + ++L+ MY++CG    AR +FD +  ++ +SW S+++ YA SG          +
Sbjct: 137 CDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196

Query: 135 GNAENVTE----------------GFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWA 177
               N+                   F LF  + RE I     L L+ ++  C +   +  
Sbjct: 197 APVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLEL 256

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + +HG  + +G     F+S ALV++Y+K   I  AK +F  M  +DV+ W  ++   A+
Sbjct: 257 GKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQ 316

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +G  EE   L+ ++  S + P++ +   +L   S  G
Sbjct: 317 HGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG 353



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LGK  H  ++        F++N L+ MY++C  ++ A+ +F +MP +D+ISW SI+  
Sbjct: 254 LELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVG 313

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
            A  G+       E   L+  +  S    + +T   LL  C  +G V       G  L  
Sbjct: 314 TAQHGKAE-----EALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLV-----SRGRELFR 363

Query: 189 GLVWDEFVSGA------LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
            +  D  ++ +      L+++ S+ G + EA+ L D +  + D   W  +L A
Sbjct: 364 SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSA 416


>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Glycine max]
          Length = 629

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 194/584 (33%), Positives = 295/584 (50%), Gaps = 77/584 (13%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           + IH HAIK  T  D FV+  L+ VYC+   +  A  LF      ++  + ++I G++  
Sbjct: 44  QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +   A+ LF  M       D   +   +KAC     L  GK++H   +KSG  LD  ++
Sbjct: 104 GSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA 163

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVA------------------------------ 560
             ++++Y KCG + DA+ +F+ +P  D VA                              
Sbjct: 164 LKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTV 223

Query: 561 -WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
            WT +I G V NGE +  L ++ +M++ GV P+E TF  ++ A + L ALE GR IHA +
Sbjct: 224 CWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYM 283

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            K     + FV  +L++MY++CG+I++A  LF  + +++   +N+M+ GLA HG   E +
Sbjct: 284 RKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAV 343

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
           +LF +M    V P+ +TF+GVL+ACS+ GLV    E F  M   +GIEPEVEHY  +VD 
Sbjct: 344 ELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDI 403

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
           LGR GR +EA + I  M  EA   M  +LL AC++  +   G+ VA+ L      DS ++
Sbjct: 404 LGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSF 463

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADL-------IF 836
           ++LSN +A+  +W      R +M++  + K+P                 DL       I+
Sbjct: 464 IMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIY 523

Query: 837 AKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSN 896
            K+E L    K  GY+P T+  L D+++E+KE AL  HSE+LA  YGL+ST   + +   
Sbjct: 524 KKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVG 583

Query: 897 KE-----------PLYA------------NRFHHLRDGMCPCAD 917
           K             L A            NRFHH  +G C C D
Sbjct: 584 KNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKD 627



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 33/301 (10%)

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
           K  + +H +A+K+    D  V+  +L +Y K   +  A  +F     P+   +T++I G 
Sbjct: 41  KHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGF 100

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V  G    A++++ QM    V+ D +    ++KA     AL  G+++H  ++K     D 
Sbjct: 101 VSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDR 160

Query: 629 FVGISLVDMYAKCGNIEDAYIL-------------------------------FKQMDMR 657
            + + LV++Y KCG +EDA  +                               F +M  R
Sbjct: 161 SIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTR 220

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           +TV W  ++ GL ++G     L++F +M+  GVEP+ VTF+ VLSAC+  G + E     
Sbjct: 221 DTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGAL-ELGRWI 279

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
           H    K G+E        L++   R G   EA  L   +  +   S + +++G   + G 
Sbjct: 280 HAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVK-DVSTYNSMIGGLALHGK 338

Query: 778 T 778
           +
Sbjct: 339 S 339



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 131/309 (42%), Gaps = 46/309 (14%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +S H   + +    D F+   L+ +Y +   + +A +LF    + ++  + S++  +   
Sbjct: 44  QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G     + T+   LF  +           +  +LK C+    + + + VHG  LK GL  
Sbjct: 104 G-----SYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGL 158

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  ++  LV +Y K G + +A+ +FDGM ERDVV   VM+ +  + G  EE   +F    
Sbjct: 159 DRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVF---- 214

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                             +++G R                   + V W   + G ++ G+
Sbjct: 215 ------------------NEMGTR-------------------DTVCWTMVIDGLVRNGE 237

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
            +  +E F  M    V+ + VTF+  L+A A    L LG+ IH    K G      V  +
Sbjct: 238 FNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGA 297

Query: 373 LINMYSKMG 381
           LINMYS+ G
Sbjct: 298 LINMYSRCG 306



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 36/280 (12%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           D + +  S++ ++  F Q       + +    ++L+  +    L  GK  H  +L S   
Sbjct: 98  DGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLG 157

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS------------------------ 121
            DR +   L+ +Y +CG L  AR++FD MP+RD+++                        
Sbjct: 158 LDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEM 217

Query: 122 -------WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
                  W  ++     +GE N      G  +FR ++      + +T   +L  C   G 
Sbjct: 218 GTRDTVCWTMVIDGLVRNGEFN-----RGLEVFREMQVKGVEPNEVTFVCVLSACAQLGA 272

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +     +H Y  K G+  + FV+GAL+N+YS+ G I EA+ LFDG++ +DV  +  M+  
Sbjct: 273 LELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGG 332

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            A +G   E   LF ++ +  + P+  +   VL   S  G
Sbjct: 333 LALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGG 372



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 178/406 (43%), Gaps = 29/406 (7%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           +++H +A+K     D FV+  L+ +Y K   I  A  LF   Q  +V L+  ++  +   
Sbjct: 44  QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVISDLGKRHEEQV--------QAYA 285
           G   +  +LF  + R  +  D+ +V      CVL      GK     V        ++ A
Sbjct: 104 GSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA 163

Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
           +KL+       V+   +K+   +   D    + C V MI S      V   + +    GT
Sbjct: 164 LKLVELYGKCGVLEDARKMFDGMPERD---VVACTV-MIGSCFDCGMVEEAIEVFNEMGT 219

Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
            +      +    +++G +      N  + ++ +M  V G+  ++ T   VL A + L  
Sbjct: 220 RDTVCWTMVIDGLVRNGEF------NRGLEVFREMQ-VKGVEPNEVTFVCVLSACAQLG- 271

Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
            L L + IH +  K     + FV+ ALI++Y R G + EA+ LF+     D++T+N+MI 
Sbjct: 272 ALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIG 331

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC--GCLLMLKQGKQMHAYAMKSGF 523
           G  L   S +A+ELFS M     R + IT    + AC  G L+ L  G+   +  M  G 
Sbjct: 332 GLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLG-GEIFESMEMIHGI 390

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC 568
           E ++     ++D+  + G + +A      +    DD    +++S C
Sbjct: 391 EPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSAC 436


>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
 gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
          Length = 449

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 171/435 (39%), Positives = 238/435 (54%), Gaps = 46/435 (10%)

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           + + +L+MYV+CG++ +A+ +F+ +  PD  +WT MI+ C +N E   AL ++H+M L G
Sbjct: 13  LENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRMNLEG 72

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + P   T A ++ A +C  AL+ G+QIH+ L      S      +L+DMYAKCG++E + 
Sbjct: 73  IPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSS 132

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            +F  M+ RN+V W AM+  LAQHG G+E L+LF++M   G+  D+ TFI VL ACS+ G
Sbjct: 133 KVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAG 192

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
           L+ E+ E FH M E Y I P   HY   +D +GRAGR ++A ELI SMPF       + L
Sbjct: 193 LIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVTWKTL 252

Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
           L ACR+    E    VAE L  L P DS AY LL N++AA  ++ D    R  M  + +K
Sbjct: 253 LNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSMTDRGLK 312

Query: 829 KDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE 865
           K P                        D I  ++E L  R++E GYVP+T  VL  V EE
Sbjct: 313 KVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEE 372

Query: 866 EKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------A 902
           EKE+ +  HSEKLA A+GLI+TPP + +L  K                            
Sbjct: 373 EKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDT 432

Query: 903 NRFHHLRDGMCPCAD 917
           +RFHH  DG C C D
Sbjct: 433 HRFHHFEDGQCSCKD 447



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 4/263 (1%)

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           +++ +  AL+++Y R GS+ EA  +F+  D  D  +W  MI     +    +ALELF  M
Sbjct: 9   SNAILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRM 68

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
           +  G     +T+A+ + AC C   LK GKQ+H+    SGF   +   + +LDMY KCG++
Sbjct: 69  NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 128

Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
             +  +F  +   + V+WT MI+    +G+ D AL ++ +M L G+V D  TF  +++A 
Sbjct: 129 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 188

Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTV 660
           S    +++  +   ++++ D +  P        +D   + G ++DA  L   M     TV
Sbjct: 189 SHAGLIKESLEFFHSMVE-DYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETV 247

Query: 661 LWNAMLVGLAQHGNGEETLKLFE 683
            W  +L     H   E   K+ E
Sbjct: 248 TWKTLLNACRIHSQAERATKVAE 270



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 7/187 (3%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
            L N L+ MY RCGSL  AR++FD M   D  SW +++ A   + E     + E   LF 
Sbjct: 12  ILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCE-----LLEALELFH 66

Query: 149 SLR-ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
            +  E I  TS +TLA +L  C  SG +   + +H      G         AL+++Y+K 
Sbjct: 67  RMNLEGIPPTS-VTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKC 125

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           G +  +  +F  M+ R+ V W  M+ A A++G G+E   LF +++  G+  D  +  CVL
Sbjct: 126 GSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVL 185

Query: 268 GVISDLG 274
              S  G
Sbjct: 186 RACSHAG 192



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+     TLASVL A +     L + KQIH     +   +     TAL+D+Y + GS+  
Sbjct: 72  GIPPTSVTLASVLNACAC-SGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 130

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           +  +F   +  +  +W AMI          +ALELF  M+  G   D  T    ++AC  
Sbjct: 131 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 190

Query: 505 LLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDD 558
             ++K+  +     +  YA+ +  E   C +   LD   + G + DA+ + + +P  P+ 
Sbjct: 191 AGLIKESLEFFHSMVEDYAI-APTETHYCRA---LDTIGRAGRLQDAEELIHSMPFHPET 246

Query: 559 VAWTTMISGCVDNGEEDLALSI 580
           V W T+++ C  + + + A  +
Sbjct: 247 VTWKTLLNACRIHSQAERATKV 268



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           SS+  +  +L++MY +CG++E+A  +F  MD  +   W  M+    ++    E L+LF  
Sbjct: 8   SSNAILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHR 67

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G+ P SVT   VL+AC+ +G + +  +  H   +  G    V   + L+D   + G
Sbjct: 68  MNLEGIPPTSVTLASVLNACACSGAL-KVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 126

Query: 745 RTKEAGELILSMPFEASAS 763
             + + ++  +M    S S
Sbjct: 127 SLECSSKVFTAMETRNSVS 145



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 29/180 (16%)

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           +  +  AL+N+Y + G + EA+ +FD M   D   W  M+ A  EN    E   LF  ++
Sbjct: 10  NAILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRMN 69

Query: 253 RSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI--------------------- 286
             G+ P   ++  VL   +      +GK+   ++ A                        
Sbjct: 70  LEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 129

Query: 287 ---KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
              K+       N V W   ++   Q G    A+E F  M    +  D+ TF+  L A +
Sbjct: 130 CSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACS 189



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 11/186 (5%)

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
           ++   N +L NA+L    + G+ EE  K+F+ M      PD+ ++  +++AC+    + E
Sbjct: 5   ELKSSNAILENALLNMYVRCGSLEEARKVFDAMD----HPDAFSWTNMITACTENCELLE 60

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL---ILSMPFEASASMHRALL 769
           A E FH M  + GI P     + +++A   +G  K   ++   + +  F +S     ALL
Sbjct: 61  ALELFHRMNLE-GIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALL 119

Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
                 G  E    V     A+E  +S ++  +    A   Q D+      EM  + +  
Sbjct: 120 DMYAKCGSLECSSKV---FTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVA 176

Query: 830 DPADLI 835
           D    I
Sbjct: 177 DATTFI 182


>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 181/530 (34%), Positives = 287/530 (54%), Gaps = 48/530 (9%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           K++  + I +    D ++   ++ ++ + G M +A  LF+     ++ +WN +I G + +
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
            +  +A  LF  M             T ++A   L ++  G+Q+H+ ++K+G   D+ V+
Sbjct: 211 GDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVA 270

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMY KCG++ DAQ +F+ +P    V W ++I+G   +G  + ALS+Y++MR SGV 
Sbjct: 271 CALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK 330

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
            D FTF+I+++  + L +LE  +Q HA L++     D     +LVD+Y+K G IEDA  +
Sbjct: 331 IDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHV 390

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M  +N + WNA++ G   HG G E +++FE M   G+ P+ VTF+ VLSACSY+GL 
Sbjct: 391 FDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLS 450

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
              +E F  M   + I+P   HY+ +++ LGR G   EA  LI   PF+ + +M  ALL 
Sbjct: 451 DRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLT 510

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV  + E GK+ AEKL  + P   S YV+L NI+  + + ++  +             
Sbjct: 511 ACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAA------------- 557

Query: 831 PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST--- 887
                      L+  I + GYVP   F+L DV+E+E ER L YHSEKLA A+GLI+T   
Sbjct: 558 -----------LMLEISKHGYVPQDKFLLPDVDEQE-ERVLLYHSEKLAIAFGLINTSDW 605

Query: 888 PPSSVILSN------------------KEPLY--ANRFHHLRDGMCPCAD 917
            P  ++ S+                  +E +   A+RFHH +DG C C D
Sbjct: 606 TPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGD 655



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 154/305 (50%), Gaps = 34/305 (11%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           ++NS   PD +L N ++ M+ +CG ++ ARRLFD+MP+++++SWN+I+     +G     
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG----- 211

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
           +  E FRLF  + +  +         +++     G ++A   +H  +LK G+  D FV+ 
Sbjct: 212 DYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           AL+++YSK G I +A+ +FD M E+  V W  ++  YA +G+ EE   ++ ++  SG+  
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331

Query: 259 DDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYNN----------- 293
           D+ +   ++ + + L    H +Q  A  ++             + LY+            
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391

Query: 294 ----NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
               + NV+ WN  ++GY   G    A+E F  M+   +  + VTFL  L+A + +   +
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSD 451

Query: 350 LGQQI 354
            G +I
Sbjct: 452 RGWEI 456



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 5/223 (2%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           S + S  + +++R +     +  G+  H+  L +    D F+   L+ MYS+CGS+  A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            +FD+MP++  + WNSI+A YA  G        E   ++  +R+S       T + ++++
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSE-----EALSMYYEMRDSGVKIDNFTFSIIIRI 342

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     +  ++  H   ++ G   D   + ALV++YSK+G+I +AK +FD M  ++V+ W
Sbjct: 343 CARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISW 402

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
             ++  Y  +G G E   +F  +   G+ P+  +   VL   S
Sbjct: 403 NALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 66/354 (18%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N++ WN  + G +  GD   A   F+ M +      S  F+  + A AG   +  G+Q+H
Sbjct: 196 NILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLH 255

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG------CV-------------------------- 383
             +LK+G    V V  +LI+MYSK G      CV                          
Sbjct: 256 SCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSE 315

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G++ D FT + ++R  + L    H +KQ H   +++    D   +TAL
Sbjct: 316 EALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEH-AKQAHAGLVRHGFGLDIVANTAL 374

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           +D+Y + G + +A+++F+     ++ +WNA+I GY       +A+E+F  M   G   + 
Sbjct: 375 VDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNH 434

Query: 493 ITIATAVKACGCLLMLKQG----------KQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           +T    + AC    +  +G           ++   AM     ++L    G+LD       
Sbjct: 435 VTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD------- 487

Query: 543 MVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
             +A ++  D P  P    W  +++ C     ++  L  +   +L G+ P++ +
Sbjct: 488 --EAFALIKDAPFKPTVNMWAALLTAC--RVHKNFELGKFAAEKLYGMGPEKLS 537



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 41/256 (16%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
           T   L+  C+    +   + V  Y +  GL  DE++   ++ ++ K G + +A+ LFD M
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFV------------------------------- 249
            E++++ W  ++    + G   E F LF+                               
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 250 DLHRSGL---CPDDESVQCVL-GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
            LH   L      D  V C L  + S  G   + Q       +         V WN  ++
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC------VFDQMPEKTTVGWNSIIA 306

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           GY   G +  A+  +  M  S V+ D+ TF + +   A   +L   +Q H   ++ GF  
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366

Query: 366 AVIVGNSLINMYSKMG 381
            ++   +L+++YSK G
Sbjct: 367 DIVANTALVDLYSKWG 382


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 214/748 (28%), Positives = 349/748 (46%), Gaps = 127/748 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV +   +SG+ +      A+E F  M+ S ++ +  TF+  L A     +  LG Q+H
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
           G  +K G  S V + N+L+ +Y K G +                                
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279

Query: 384 -----------C-GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                      C GL+ D F+L+++L A +   + +   +Q+H  A+K    +   VS++
Sbjct: 280 EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMK-GQQLHALALKVGLESHLSVSSS 338

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI----------------------- 468
           LI  Y + GS  +   LFE     D+ TW  MI  Y+                       
Sbjct: 339 LIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISY 398

Query: 469 ------LSNN--SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
                 LS N    +ALELF  M   G  + + T+ + + ACG L   K  +Q+  + MK
Sbjct: 399 NAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMK 458

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA--WTTMISGCVDNGEEDLAL 578
            G   + C+ + ++DMY +CG M DA+ IF      +D     T+MI G   NG+ + A+
Sbjct: 459 FGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAI 518

Query: 579 SIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           S++H  +  G +V DE     ++     +   E G+Q+H + +K    ++  VG + V M
Sbjct: 519 SLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSM 578

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KC N++DA  +F  M+M++ V WN ++ G   H  G++ L +++ M+  G++PDS+TF
Sbjct: 579 YSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITF 638

Query: 698 IGVLSACSYT--GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
             ++SA  +T   LV      F  M  ++ I+P +EHY+  +  LGR G  +EA + I +
Sbjct: 639 ALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRN 698

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
           MP E    + RALL +CR+  +    K  A  ++A+EP D  +Y+L SN+++A+ +W   
Sbjct: 699 MPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYS 758

Query: 816 TSARGEMKRKNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYV 852
              R +M+ K  +K P+                         I++ +E LI    + GYV
Sbjct: 759 EKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYV 818

Query: 853 PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------- 893
           PDT FVL +VEE +K+  L+YHS KLA  +G++ T P   I                   
Sbjct: 819 PDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYV 878

Query: 894 --LSNKEPLYANR--FHHLRDGMCPCAD 917
             ++ ++ L  +   FH   DG C C D
Sbjct: 879 SIVTRRKILLRDTSGFHWFIDGQCSCTD 906



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 175/714 (24%), Positives = 317/714 (44%), Gaps = 99/714 (13%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           SLS   F  +S  +S S+ +  F +LR +    D  L ++ HA+ L   +  D FL N L
Sbjct: 79  SLSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLKLEE--DIFLGNAL 136

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           ++ Y + G +  A ++F  +   +++S+ ++++ ++ S   +     E   LF ++ +S 
Sbjct: 137 ISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWED-----EAVELFFAMLDSG 191

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  T   +L  C+ +        VHG  +K+GL+   F+  AL+ +Y K G +    
Sbjct: 192 IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVL 251

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDL 273
            LF+ M ERD+  W  ++ +  +    +E F  F  +    GL  D  S+  +L   +  
Sbjct: 252 RLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGS 311

Query: 274 GKRHE-EQVQAYAIKLLLYNNNS----------------------------NVVLWNKKL 304
            K  + +Q+ A A+K+ L ++ S                            +V+ W   +
Sbjct: 312 VKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMI 371

Query: 305 SGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + Y++ G    A+E F  M + N + Y++V     LA ++  D+ +   ++    L+ G 
Sbjct: 372 TSYMEFGMLDSAVEVFNKMPKRNCISYNAV-----LAGLSRNDDGSRALELFIEMLEEGV 426

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
             +     S+I         CGL                  +   +S+QI    +K   +
Sbjct: 427 EISDCTLTSIIT-------ACGLL-----------------KSFKVSQQIQGFVMKFGIL 462

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENK--DGFDLATWNAMIFGYILSNNSHKALELFS 481
           ++S + TAL+D+Y R G M +AE +F  +  +    A   +MI GY  +   ++A+ LF 
Sbjct: 463 SNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFH 522

Query: 482 HMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
              + G   +DE+   + +  CG +   + GKQMH +A+KSG   +  V +  + MY KC
Sbjct: 523 SGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKC 582

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             M DA  +FN +   D V+W  +++G V + + D AL I+ +M  +G+ PD  TFA+++
Sbjct: 583 WNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGI--------------SLVDMYAKCGNIED 646
            A             H  L  +D     FV +              S + +  + G +E+
Sbjct: 643 SAYK-----------HTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEE 691

Query: 647 AYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFI 698
           A    + M +   V +W A+L     + N  E L+         VEP D +++I
Sbjct: 692 AEQTIRNMPLEPDVYVWRALLNSCRINKN--ERLEKLAARNILAVEPKDPLSYI 743



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 43/411 (10%)

Query: 386 LRTDQFTLAS---VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           L T   T+AS   +LR S+   +   L++ +H   +K +   D F+  ALI  Y + G +
Sbjct: 90  LNTSLSTIASPFDLLRLSTRYGDP-DLARAVHAQFLKLE--EDIFLGNALISAYLKLGLV 146

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A+ +F      ++ ++ A+I G+  S+   +A+ELF  M  SG   +E T    + AC
Sbjct: 147 RDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTAC 206

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
              +  + G Q+H   +K G    + + + ++ +Y KCG +     +F ++P  D  +W 
Sbjct: 207 IRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWN 266

Query: 563 TMISGCVDNGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T+IS  V   + D A   +  M+L  G+  D F+ + L+ A +      +G+Q+HA  +K
Sbjct: 267 TVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALK 326

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW------------------- 662
           +   S   V  SL+  Y KCG+  D   LF+ M +R+ + W                   
Sbjct: 327 VGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEV 386

Query: 663 ------------NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY--TG 708
                       NA+L GL+++ +G   L+LF +M   GVE    T   +++AC    + 
Sbjct: 387 FNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSF 446

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            VS+  + F +   K+GI       + LVD   R GR ++A ++      E
Sbjct: 447 KVSQQIQGFVM---KFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLE 494


>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Glycine max]
          Length = 678

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 216/690 (31%), Positives = 334/690 (48%), Gaps = 77/690 (11%)

Query: 181 VHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
           +H   LK G++     V+  L+ +YS+   +++A  LFD M + +   W  +++A+  +G
Sbjct: 22  LHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLVQAHLNSG 81

Query: 240 FGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
                 HLF  + H++    +         V+S   K    Q+   A  L     + N +
Sbjct: 82  HTHSALHLFNAMPHKTHFSWN--------MVVSAFAKSGHLQL---AHSLFNAMPSKNHL 130

Query: 299 LWNKKLSGYLQVGDNHGAIECF--VNMIRSNVQY-DSVTFLVALAAVAGTDNLNLGQQIH 355
           +WN  +  Y + G    A+  F  +N+  S + Y D+     AL A A +  LN G+Q+H
Sbjct: 131 VWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLALNCGKQVH 190

Query: 356 GTTLKSGFYSAV--IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
                 G    +  ++ +SLIN+Y K    CG       + S +R               
Sbjct: 191 ARVFVDGMGLELDRVLCSSLINLYGK----CGDLDSAARIVSFVRD-------------- 232

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
                      D F  +ALI  Y   G M EA  +F++K       WN++I GY+ +   
Sbjct: 233 ----------VDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEE 282

Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
            +A+ LFS M  +G + D   +A  + A   LL+++  KQMH YA K+G   D+ V+S +
Sbjct: 283 VEAVNLFSAMLRNGVQGDASAVANILSAASGLLVVELVKQMHVYACKAGVTHDIVVASSL 342

Query: 534 LDMYVKC-------------------------------GAMVDAQSIFNDIPAPDDVAWT 562
           LD Y KC                               G + DA+ IFN +P+   ++W 
Sbjct: 343 LDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISWN 402

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
           +++ G   N     AL+I+ QM    +  D F+FA ++ A +C ++LE G Q+    I +
Sbjct: 403 SILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGKAITI 462

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
              SD  +  SLVD Y KCG +E    +F  M   + V WN ML+G A +G G E L LF
Sbjct: 463 GLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLF 522

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
            +M   GV P ++TF GVLSAC ++GLV E    FH M+  Y I P +EH+S +VD   R
Sbjct: 523 CEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFAR 582

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG  +EA +LI  MPF+A A+M  ++L  C   G+   GK  AE+++ LEP ++ AY+ L
Sbjct: 583 AGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQL 642

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           SNI A++  W+     R  M+ K+ +K P 
Sbjct: 643 SNILASSGDWEGSALVRELMRDKHFQKIPG 672



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 167/662 (25%), Positives = 303/662 (45%), Gaps = 96/662 (14%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRF-LTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++R   S S L  G+  H   L +  +     + N L+ +YSRC +L  A  LFD+MP  
Sbjct: 6   LVRTLQSWSTLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQT 65

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +  SWN+++ A+ +SG  ++        LF ++     F+  + ++   K    SG++  
Sbjct: 66  NSFSWNTLVQAHLNSGHTHS-----ALHLFNAMPHKTHFSWNMVVSAFAK----SGHLQL 116

Query: 178 SETV-HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-------ERDVVLWK 229
           + ++ +    K  LVW+     ++++ YS+ G   +A FLF  M         RD  +  
Sbjct: 117 AHSLFNAMPSKNHLVWN-----SIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLA 171

Query: 230 VMLRAYAEN---GFGEEVF-HLFVD--------------LHRSGLCPDDESVQCVLGVIS 271
             L A A++     G++V   +FVD              ++  G C D +S   ++  + 
Sbjct: 172 TALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVR 231

Query: 272 DLGK--------------RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
           D+ +              R  E    +  K+     +   VLWN  +SGY+  G+   A+
Sbjct: 232 DVDEFSLSALISGYANAGRMREARSVFDSKV-----DPCAVLWNSIISGYVSNGEEVEAV 286

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  M+R+ VQ D+      L+A +G   + L +Q+H    K+G    ++V +SL++ Y
Sbjct: 287 NLFSAMLRNGVQGDASAVANILSAASGLLVVELVKQMHVYACKAGVTHDIVVASSLLDAY 346

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
           SK    C                    E   L  ++  +        D+ +   +I VY 
Sbjct: 347 SKCQSPC--------------------EACKLFSELKEY--------DTILLNTMITVYS 378

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
             G + +A+ +F       L +WN+++ G   +    +AL +FS M+    ++D  + A+
Sbjct: 379 NCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFAS 438

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            + AC C   L+ G+Q+   A+  G E D  +S+ ++D Y KCG +   + +F+ +   D
Sbjct: 439 VISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTD 498

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           +V+W TM+ G   NG    AL+++ +M   GV P   TF  ++ A      +E+GR +  
Sbjct: 499 EVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLF- 557

Query: 618 NLIKLDCSSDPFVGIS----LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
           + +K   + +P  GI     +VD++A+ G  E+A  L ++M  + +  +W ++L G   H
Sbjct: 558 HTMKHSYNINP--GIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAH 615

Query: 673 GN 674
           GN
Sbjct: 616 GN 617



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 15/188 (7%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++      S L LG+    + +      D+ ++ +L+  Y +CG +   R++FD M   
Sbjct: 438 SVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKT 497

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D +SWN++L  YA +G G      E   LF  +     + S +T   +L  C  SG V  
Sbjct: 498 DEVSWNTMLMGYATNGYG-----IEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEE 552

Query: 178 SETV-----HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
              +     H Y +  G+  + F    +V+++++ G   EA  L + M  + D  +W  +
Sbjct: 553 GRNLFHTMKHSYNINPGI--EHF--SCMVDLFARAGYFEEAMDLIEEMPFQADANMWLSV 608

Query: 232 LRAYAENG 239
           LR    +G
Sbjct: 609 LRGCIAHG 616



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 24/201 (11%)

Query: 599 LVKASSCLTALEQGRQIHANLIKLDC-SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           LV+     + L +GRQ+H   +K    +S   V   L+ +Y++C N++DA  LF +M   
Sbjct: 6   LVRTLQSWSTLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQT 65

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDM--KAHGVEPDSVTFIGVLSACSYTGLVSEAYE 715
           N+  WN ++      G+    L LF  M  K H       ++  V+SA + +G +  A+ 
Sbjct: 66  NSFSWNTLVQAHLNSGHTHSALHLFNAMPHKTH------FSWNMVVSAFAKSGHLQLAHS 119

Query: 716 NFHLMREKYGIEPEVEH--YSFLVDALGRAGRTKEAGELILSMPFEASASMHR------A 767
            F+ M       P   H  ++ ++ +  R G   +A  L  SM  + S  ++R       
Sbjct: 120 LFNAM-------PSKNHLVWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLAT 172

Query: 768 LLGACRVQGDTETGKWVAEKL 788
            LGAC        GK V  ++
Sbjct: 173 ALGACADSLALNCGKQVHARV 193


>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial; Flags: Precursor
 gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
 gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 695

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 227/727 (31%), Positives = 338/727 (46%), Gaps = 76/727 (10%)

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD-EFVS 197
           N +  F L  S  +++    R     LL+ C S          +G  LK G +     V+
Sbjct: 6   NSSYRFYLSSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVA 65

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+ +YS+ GK+  A+ LFD M +R+   W  M+  Y  +G        F       + 
Sbjct: 66  NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMM 119

Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
           P+ +     + V+S   K  E  V   A +L       +VV  N  L GY+  G    A+
Sbjct: 120 PERDGYSWNV-VVSGFAKAGELSV---ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEAL 175

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  +   N   D++T    L A A  + L  G+QIH   L  G      + +SL+N+Y
Sbjct: 176 RLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVY 232

Query: 378 SKMGCVCG-LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
           +K    CG LR   + L  +       P+   LS                    ALI  Y
Sbjct: 233 AK----CGDLRMASYMLEQIRE-----PDDHSLS--------------------ALISGY 263

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
              G + E+  LF+ K    +  WN+MI GYI +N   +AL LF+ M     R D  T+A
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLA 322

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
             + AC  L  L+ GKQMH +A K G   D+ V+S +LDMY KCG+ ++A  +F+++ + 
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382

Query: 557 DDV-------------------------------AWTTMISGCVDNGEEDLALSIYHQMR 585
           D +                               +W +M +G   NG     L  +HQM 
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
              +  DE + + ++ A + +++LE G Q+ A    +   SD  V  SL+D+Y KCG +E
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
               +F  M   + V WN+M+ G A +G G E + LF+ M   G+ P  +TF+ VL+AC+
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           Y GLV E  + F  M+  +G  P+ EH+S +VD L RAG  +EA  L+  MPF+   SM 
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMW 622

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
            ++L  C   G    GK  AEK++ LEP +S AYV LS IFA +  W+     R  M+  
Sbjct: 623 SSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMREN 682

Query: 826 NVKKDPA 832
           NV K+P 
Sbjct: 683 NVTKNPG 689



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 170/658 (25%), Positives = 311/658 (47%), Gaps = 93/658 (14%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K T  R  +     D +  N +++ +++ G L  ARRLF+ MP++D+++ NS+L  Y  +
Sbjct: 109 KGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G        E  RLF+ L  S      +TL  +LK C     +   + +H   L  G+  
Sbjct: 169 GYAE-----EALRLFKELNFS---ADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC 220

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  ++ +LVN+Y+K G +R A ++ + ++E                              
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIRE------------------------------ 250

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                PDD S+  ++   ++ G+ +E +       L    +N  V+LWN  +SGY+    
Sbjct: 251 -----PDDHSLSALISGYANCGRVNESR------GLFDRKSNRCVILWNSMISGYIA--- 296

Query: 313 NHGAIECFV--NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           N+  +E  V  N +R+  + DS T    + A  G   L  G+Q+H    K G    ++V 
Sbjct: 297 NNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           ++L++MYSK G                    S  E   L  ++  +        D+ +  
Sbjct: 357 STLLDMYSKCG--------------------SPMEACKLFSEVESY--------DTILLN 388

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           ++I VY   G + +A+ +FE  +   L +WN+M  G+  +  + + LE F  MH      
Sbjct: 389 SMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT 448

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           DE+++++ + AC  +  L+ G+Q+ A A   G + D  VSS ++D+Y KCG +   + +F
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   D+V W +MISG   NG+   A+ ++ +M ++G+ P + TF +++ A +    +E
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568

Query: 611 QGRQIHANLIKLDCSSDP----FVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAM 665
           +GR++  ++ K+D    P    F    +VD+ A+ G +E+A  L ++M    +  +W+++
Sbjct: 569 EGRKLFESM-KVDHGFVPDKEHFS--CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSI 625

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           L G   +G      K  E  K   +EP+ SV ++ + +  + +G    +     LMRE
Sbjct: 626 LRGCVANGYKAMGKKAAE--KIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 126/549 (22%), Positives = 221/549 (40%), Gaps = 141/549 (25%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA---------- 107
           ++L+       L  GK  HA+IL      D  + ++L+ +Y++CG L  A          
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251

Query: 108 ---------------------RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT-EGFR 145
                                R LFD+  +R +I WNS+++ Y       A N+  E   
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI------ANNMKMEALV 305

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
           LF  +R      SR TLA ++  C+  G++   + +H +A K GL+ D  V+  L+++YS
Sbjct: 306 LFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G   EA  LF  ++  D +L   M++ Y                             C
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVY---------------------------FSC 397

Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
             G I D  KR  E+++           N +++ WN   +G+ Q G     +E F  M +
Sbjct: 398 --GRIDD-AKRVFERIE-----------NKSLISWNSMTNGFSQNGCTVETLEYFHQMHK 443

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
            ++  D V+    ++A A   +L LG+Q+       G  S  +V +SLI++Y    C CG
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY----CKCG 499

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
                                +   +++    +K+D V       ++I  Y  NG   EA
Sbjct: 500 F--------------------VEHGRRVFDTMVKSDEVP----WNSMISGYATNGQGFEA 535

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
                                          ++LF  M  +G R  +IT    + AC   
Sbjct: 536 -------------------------------IDLFKKMSVAGIRPTQITFMVVLTACNYC 564

Query: 506 LMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTT 563
            ++++G+++  +  +  GF  D    S ++D+  + G + +A ++  ++P   D   W++
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624

Query: 564 MISGCVDNG 572
           ++ GCV NG
Sbjct: 625 ILRGCVANG 633



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 9/186 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S++    S S L LG+   AR        D+ ++++L+ +Y +CG + + RR+FD M   
Sbjct: 455 SVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS 514

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D + WNS+++ YA +G+G      E   LF+ +  +    +++T   +L  C   G V  
Sbjct: 515 DEVPWNSMISGYATNGQG-----FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEE 569

Query: 178 SETVHGYALKI--GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
              +   ++K+  G V D+     +V++ ++ G + EA  L + M  + D  +W  +LR 
Sbjct: 570 GRKLF-ESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628

Query: 235 YAENGF 240
              NG+
Sbjct: 629 CVANGY 634


>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 195/566 (34%), Positives = 303/566 (53%), Gaps = 62/566 (10%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI-L 469
           KQ+H H I    +  ++  + ++ +         A  +F +     +  +N +I     +
Sbjct: 26  KQVHAHMITTGLIFHTYPLSRIL-LISSTIVFTHALSIFNHIPNPTIFLYNTLISSLANI 84

Query: 470 SNNSHKALELFSHMHT-SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
             ++H A  L+S + T +  + +  T  +  KACG    L+ G+ +H + +K  F    C
Sbjct: 85  KPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLK--FLEPTC 142

Query: 529 ---VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE---EDLALSI-- 580
              V + +L+ Y KCG +   + +FN I  PD  +W +++S  V N     ED++LS+  
Sbjct: 143 DPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEV 202

Query: 581 ---YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
              + +M+ S +  +E T   L+ A + L AL QG   H  ++K +   + FVG +L+DM
Sbjct: 203 LTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDM 262

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KCG ++ A  LF Q+  R+T+ +NAM+ G A HG G + L LF+ M   G+ PD VT 
Sbjct: 263 YSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTL 322

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +  + +CS+ GLV E  + F  M+E YG+EP++EHY  LVD LGRAGR +EA E +L+MP
Sbjct: 323 VVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMP 382

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            + +A + R+LLGA RV G+ E G+ V + L+ LEP  S  YVLLSN++A+ N+WDDV  
Sbjct: 383 MKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKR 442

Query: 818 ARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPD 854
            R  MK   + K P                       +  I+ K+E + +R+ E G+ P 
Sbjct: 443 VRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPR 502

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLIST---PPSSVI------------------ 893
           T  VL D+EEEEKE AL YHSE+LA A+ LI++    P  +I                  
Sbjct: 503 TLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISK 562

Query: 894 LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +  +E +    NRFHH ++G C C+D
Sbjct: 563 IYEREIIVRDRNRFHHFKEGACSCSD 588



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 24/272 (8%)

Query: 7   ANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAIST 66
           AN+KP   HT++ FS ++    R L   +L    F   S F +  S   W   LRH    
Sbjct: 82  ANIKP---HTHIAFSLYS----RVLTHTTLKPNGFTFPSLFKACGSQP-W---LRH---- 126

Query: 67  SDLLLGKSTHARILNSSQ-IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
                G++ H  +L   +   D F+   L+  Y++CG +   R LF+++   DL SWNSI
Sbjct: 127 -----GRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSI 181

Query: 126 LAAYAHSGEGNAENVT---EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
           L+AY H+     E+V+   E   LF  +++S+   + +TL  L+  C   G +      H
Sbjct: 182 LSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAH 241

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
            Y LK  L  + FV  AL+++YSK G +  A  LFD +  RD + +  M+  +A +G+G 
Sbjct: 242 VYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGH 301

Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           +   LF  +   GL PDD ++   +   S +G
Sbjct: 302 QALDLFKKMTLEGLAPDDVTLVVTMCSCSHVG 333



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 109/292 (37%), Gaps = 77/292 (26%)

Query: 300 WNKKLSGYLQVGDNHGAI-----------ECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
           WN  LS Y+    N GAI             F+ M +S ++ + VT +  ++A A    L
Sbjct: 178 WNSILSAYVH---NSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGAL 234

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
           + G   H   LK        VG +LI+MYSK GC+                         
Sbjct: 235 SQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCL------------------------- 269

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
                       D     F      D  C N                      AMI G+ 
Sbjct: 270 ------------DLACQLFDQLPHRDTLCYN----------------------AMIGGFA 295

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELD 526
           +    H+AL+LF  M   G   D++T+   + +C  + ++++G  +   +MK   G E  
Sbjct: 296 IHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFE-SMKEVYGVEPK 354

Query: 527 LCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           L     ++D+  + G + +A+    ++P  P+ V W +++     +G  ++ 
Sbjct: 355 LEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIG 406


>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 190/566 (33%), Positives = 287/566 (50%), Gaps = 56/566 (9%)

Query: 408 HLSKQIHVHA---------IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF-DL 457
           HL+K I  HA         I N    D      LID    +   A +  LF    GF D 
Sbjct: 48  HLTKSISNHAHMNQMLSQMIMNYIPIDHLNLMKLIDFSVSSHGFAASALLFTQFYGFIDS 107

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
              N+MI  Y  SN    ++ +++ M  +G   D  T  T +K+   L   + GK +H  
Sbjct: 108 DLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCC 167

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
            ++ GFE ++ VS+ +++MY  C ++ DA+ +F++IP  + V+W  +I+G   N      
Sbjct: 168 IIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKV 227

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           + ++ +M+++G  P E T   ++ A + L AL QGR I   +       + FVG +L+DM
Sbjct: 228 IDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDM 287

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           YAKCG +++A  +FK M ++N   WN ++ G A +G GE  L+ F  M     +PD VTF
Sbjct: 288 YAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTF 347

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           +GVL AC + GLV+E    F  M+E++G+ P +EHY  +VD LGRAG   EA +LI +M 
Sbjct: 348 LGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMS 407

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
            +    + R LLGACR+ G+ + G++  +KL+ LEP +   YVLL+N++A   +WD V  
Sbjct: 408 MQPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGE 467

Query: 818 ARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPD 854
            R  M  + V+K P                        + ++  +  + K++K  GYV D
Sbjct: 468 VREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVAD 527

Query: 855 TDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP-----------------------SS 891
           T     D+EEEEKE +L YHSEKLA A+GL+ +P                        S 
Sbjct: 528 TGMASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSK 587

Query: 892 VILSNKEPLYANRFHHLRDGMCPCAD 917
           V   +      NRFHH   G C C D
Sbjct: 588 VYRRDISVRDRNRFHHFVGGACSCKD 613



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 5/215 (2%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           SS + ++L+         LGK+ H  I+      + +++  L+ MY  C S+  AR++FD
Sbjct: 142 SSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFD 201

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
           ++PDR+++SWN+++  Y H+         +   +FR ++ +      +T+  +L  C   
Sbjct: 202 EIPDRNIVSWNALITGYNHN-----RMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHL 256

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
           G +     +  Y     L  + FV  AL+++Y+K G + EA+ +F  M+ ++V  W V++
Sbjct: 257 GALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLI 316

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
             YA NG GE     F  +      PD+ +   VL
Sbjct: 317 SGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVL 351



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 48/325 (14%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           L N  +  Y     +  ++  +  M ++ +  DS TF   L +VA      LG+ IH   
Sbjct: 109 LCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCI 168

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
           ++ GF S V V  +L+NMY     V                                   
Sbjct: 169 IQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVI 228

Query: 384 --------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                    G +  + T+  VL A + L   L+  + I  +   N    + FV TALID+
Sbjct: 229 DVFREMQIAGAKPVEVTMVGVLLACAHLG-ALNQGRWIDDYIDHNRLRLNVFVGTALIDM 287

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G + EAE +F+     ++ TWN +I GY ++     AL+ FS M     + DE+T 
Sbjct: 288 YAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTF 347

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDI 553
              + AC    ++ +G+  +  +MK  F L   +     ++D+  + G + +AQ +   +
Sbjct: 348 LGVLCACCHQGLVNEGRT-YFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAM 406

Query: 554 P-APDDVAWTTMISGCVDNGEEDLA 577
              PD + W  ++  C  +G   L 
Sbjct: 407 SMQPDPIIWRELLGACRIHGNIQLG 431



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 30/214 (14%)

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           + +H   +++G   + +VS ALVN+Y     + +A+ +FD + +R++V W  ++  Y  N
Sbjct: 162 KAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHN 221

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ------------------ 280
               +V  +F ++  +G  P + ++  VL   + LG  ++ +                  
Sbjct: 222 RMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVG 281

Query: 281 ---VQAYAI--------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
              +  YA         K+       NV  WN  +SGY   G    A++ F  MI    +
Sbjct: 282 TALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFK 341

Query: 330 YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
            D VTFL  L A      +N G + + T++K  F
Sbjct: 342 PDEVTFLGVLCACCHQGLVNEG-RTYFTSMKEEF 374


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 191/544 (35%), Positives = 281/544 (51%), Gaps = 59/544 (10%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V D    T +I  YC+ G +AEA  LF+     ++ +W  MI GY+ +     A +LF  
Sbjct: 168 VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEV 227

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMH-AYAMKSGFELDLCVSSGILDM-YVKC 540
           M    E          V     L+   QG ++  A  +     +   V+   + + + + 
Sbjct: 228 MPEKNE----------VSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQN 277

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
           G +  A+ +F+ I   DD  W+ MI      G E  AL+++  M+  GV  +  +   ++
Sbjct: 278 GEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVL 337

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
              + L +L+ GRQ+HA L+K    SD FV   L+ MY KCG++  A  +F +   ++ V
Sbjct: 338 SVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIV 397

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
           +WN+++ G AQHG  EE L++F +M + G+  D VTF+GVLSACSYTG V E  E F  M
Sbjct: 398 MWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESM 457

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
           + KY +EP+ EHY+ +VD LGRAG   +A +LI  MP EA A +  ALLGACR   +   
Sbjct: 458 KSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNL 517

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
            +  A+KL+ LEP ++  Y+LLSNI+A+  +W DV   R  M+ K V K P         
Sbjct: 518 AEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEK 577

Query: 833 ----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSE 876
                             I   +E L   ++E GY PD+ FVL DV+EEEK R+L +HSE
Sbjct: 578 RVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSE 637

Query: 877 KLARAYGLISTP---PSSVI------------------LSNKEPLY--ANRFHHLRDGMC 913
           +LA A+GL+  P   P  V+                  ++ +E +   ANRFHH +DG C
Sbjct: 638 RLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFC 697

Query: 914 PCAD 917
            C D
Sbjct: 698 SCRD 701



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 225/546 (41%), Gaps = 107/546 (19%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N+ +  Y+R G +  ARR+FD+MPD+ ++SWNS++A Y  +         E   LF  + 
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPR-----EARYLFDKMP 74

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
           E  T +                                  W+  +SG     Y K   + 
Sbjct: 75  ERNTVS----------------------------------WNGLISG-----YVKNRMVS 95

Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP------------- 258
           EA+  FD M ER+VV W  M+R Y + G   E   LF  +    +               
Sbjct: 96  EARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRR 155

Query: 259 --------DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
                   D   V+ V+   + +    +E   A A +L       NV+ W   +SGY+Q 
Sbjct: 156 IDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQN 215

Query: 311 GDNHGAIECFVNMIRSN----------------VQYDSVTF-LVALAAVAGTDNLNLGQQ 353
           G    A + F  M   N                ++  S  F  + + AV   + + LG  
Sbjct: 216 GQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFG 275

Query: 354 IHGTTLKS------------GFYSAVI-------VGNSLINMYSKMGCVCGLRTDQFTLA 394
            +G   K+            G +SA+I            +N+++ M    G++++  +L 
Sbjct: 276 QNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQRE-GVQSNFPSLI 334

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
           SVL   +SL    H  +Q+H   +K+   +D FV++ LI +Y + G + +A  +F+    
Sbjct: 335 SVLSVCASLASLDH-GRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSP 393

Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
            D+  WN++I GY       +AL++F  M +SG   D +T    + AC     +K+G ++
Sbjct: 394 KDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEI 453

Query: 515 HAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDN 571
              +MKS + ++      + ++D+  + G + DA  +   +P   D + W  ++  C  +
Sbjct: 454 FE-SMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTH 512

Query: 572 GEEDLA 577
              +LA
Sbjct: 513 MNMNLA 518



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 172/379 (45%), Gaps = 54/379 (14%)

Query: 22  SFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILN 81
           +F     RN+ S++  +  ++Q+    S + +  W    ++ +S + ++LG     R ++
Sbjct: 100 AFDTMPERNVVSWTAMVRGYVQEG-LVSEAETLFWQMPEKNVVSWT-VMLGGLIQVRRID 157

Query: 82  SSQ-------IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            ++       + D     N+++ Y + G L  AR LFD+MP R++ISW ++++ Y  +G+
Sbjct: 158 EARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQ 217

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIGLVWD 193
            +         + R L E +   + ++   +L      G +  ASE      +K  +  +
Sbjct: 218 VD---------VARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACN 268

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
             + G     + + G++ +A+ +FD ++E+D   W  M++ Y   GF  E  +LF  + R
Sbjct: 269 AMILG-----FGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQR 323

Query: 254 SGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LLLYN------- 292
            G+  +  S+  VL V + L    H  QV A  +K             + +Y        
Sbjct: 324 EGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVK 383

Query: 293 --------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                   +  ++V+WN  ++GY Q G    A++ F  M  S +  D VTF+  L+A + 
Sbjct: 384 ARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSY 443

Query: 345 TDNLNLGQQIHGTTLKSGF 363
           T  +  G +I   ++KS +
Sbjct: 444 TGKVKEGLEIF-ESMKSKY 461



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 29/371 (7%)

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I  Y R G +  A  +F+      + +WN+M+ GY  +N   +A  LF  M         
Sbjct: 23  IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWN 82

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
             I+  VK      M+ + ++    A  +  E ++   + ++  YV+ G + +A+++F  
Sbjct: 83  GLISGYVKN----RMVSEARK----AFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQ 134

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  + V+WT M+ G +     D A  ++  M +  VV      +   +       L + 
Sbjct: 135 MPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGR----LAEA 190

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           R++   + + +  S      +++  Y + G ++ A  LF+ M  +N V W AML+G  Q 
Sbjct: 191 RELFDEMPRRNVIS----WTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQG 246

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G  EE  +LF+ M    V   +   +G        G V++A + F  +REK     +   
Sbjct: 247 GRIEEASELFDAMPVKAVVACNAMILGF----GQNGEVAKARQVFDQIREK-----DDGT 297

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL---LGACRVQGDTETGKWVAEKLM 789
           +S ++    R G   EA  L   M  E   S   +L   L  C      + G+ V  +L+
Sbjct: 298 WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV 357

Query: 790 ALEPFDSSAYV 800
             + FDS  +V
Sbjct: 358 KSQ-FDSDVFV 367



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 156/352 (44%), Gaps = 35/352 (9%)

Query: 365 SAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
           S  I  NS I  Y+++G +   R   D+     ++  +S +      ++      + +  
Sbjct: 14  SVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM 73

Query: 423 VADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
              + VS   LI  Y +N  ++EA   F+     ++ +W AM+ GY+      +A  LF 
Sbjct: 74  PERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFW 133

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL----DLCVSSGILDMY 537
            M        E  + +     G L+ +++  +         F++    D+   + ++  Y
Sbjct: 134 QM-------PEKNVVSWTVMLGGLIQVRRIDEARGL-----FDIMPVKDVVARTNMISGY 181

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            + G + +A+ +F+++P  + ++WTTMISG V NG+ D+A  ++       V+P++    
Sbjct: 182 CQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFE------VMPEKNE-- 233

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI----SLVDMYAKCGNIEDAYILFKQ 653
             V  ++ L    QG +I       D    P   +    +++  + + G +  A  +F Q
Sbjct: 234 --VSWTAMLMGYTQGGRIEEASELFDAM--PVKAVVACNAMILGFGQNGEVAKARQVFDQ 289

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           +  ++   W+AM+    + G   E L LF  M+  GV+ +  + I VLS C+
Sbjct: 290 IREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCA 341



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 9/202 (4%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +L+L   +Q+    S+  S    S+L    S + L  G+  HA ++ S    D F+ + L
Sbjct: 314 ALNLFALMQREGVQSNFPS--LISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVL 371

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           +TMY +CG LV AR++FD+   +D++ WNSI+  YA  G      V E  ++F  +  S 
Sbjct: 372 ITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGL-----VEEALQVFHEMCSSG 426

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA-LVNIYSKFGKIREA 213
             T  +T   +L  C  +G V     +        LV  +    A +V++  + G + +A
Sbjct: 427 MATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDA 486

Query: 214 KFLFDGMQ-ERDVVLWKVMLRA 234
             L   M  E D ++W  +L A
Sbjct: 487 MDLIQKMPVEADAIIWGALLGA 508



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 19/207 (9%)

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
           C+S      S +  YA+ G IE A  +F +M  +  V WN+M+ G  Q+    E   LF+
Sbjct: 12  CTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFD 71

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M     E ++V++ G++S      +VSEA + F  M E+      V  ++ +V    + 
Sbjct: 72  KMP----ERNTVSWNGLISGYVKNRMVSEARKAFDTMPER-----NVVSWTAMVRGYVQE 122

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G   EA  L   MP +   S    L G  +V+   E     A  L  + P      V  +
Sbjct: 123 GLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDE-----ARGLFDIMPVKD--VVART 175

Query: 804 NIFAAANQWDDVTSAR---GEMKRKNV 827
           N+ +   Q   +  AR    EM R+NV
Sbjct: 176 NMISGYCQEGRLAEARELFDEMPRRNV 202


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 200/656 (30%), Positives = 332/656 (50%), Gaps = 39/656 (5%)

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           +H Y +  GL  D   S  LV++Y  FG++  A+ +FD +   D + WKV++R Y  N  
Sbjct: 24  MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83

Query: 241 GEEVFHLFVDLHRSGLC---PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
             ++   +   +R  +C    D+     VL   S+   R+ ++ +    +++ + N  + 
Sbjct: 84  FRDIVGFY---NRMRVCLKECDNVVFSHVLKACSE--SRNFDEGRKVHCQIVKFGNPDSF 138

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V      +G + +    G IEC  ++   N+  +  ++    + +AG    NL Q   G 
Sbjct: 139 VF-----TGLVDMYAKCGEIECSRSVFDENLDRNVFSWS---SMIAGYVQNNLAQD--GL 188

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            L +     +I  N                  Q TL  ++ A   L   LH  K +H + 
Sbjct: 189 VLFNRMREELIEAN------------------QITLGILVHACKKLG-ALHQGKWLHGYL 229

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           IK      S++ TAL+D+Y + G + +A  +F+   G D+ +W AMI GY  +    +AL
Sbjct: 230 IKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEAL 289

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           +LF          +++TIA+   +C  LL L  G+ +H  ++K G   D  V++ ++D Y
Sbjct: 290 KLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFY 348

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            KC    DA+ +F  I   D VAW ++IS    NG    AL ++HQMR+  V+PD  T  
Sbjct: 349 AKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLV 408

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDC-SSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
            ++ A + L AL+ G   HA  +K    SS+ +VG +L+  YAKCG+ E A ++F  MD 
Sbjct: 409 SVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQ 468

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           ++TV W+AM+ G    GNG  +L +F DM    ++P+   F  +LSACS+TG++ E +  
Sbjct: 469 KSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRL 528

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F ++ + Y + P  +HY+ +VD L RAGR KEA + I  MP +   S+  A L  C +  
Sbjct: 529 FTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHS 588

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
             + G+   ++++ L P D+  YVL+ N++A+  +W  V   R  MK++ + K P 
Sbjct: 589 RFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPG 644



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 157/304 (51%), Gaps = 1/304 (0%)

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
           SL + ++   ++H + +      D   ST L+ +Y   G +  A  +F+     D  +W 
Sbjct: 13  SLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWK 72

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
            +I  Y L++     +  ++ M    +  D +  +  +KAC       +G+++H   +K 
Sbjct: 73  VIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKF 132

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           G   D  V +G++DMY KCG +  ++S+F++    +  +W++MI+G V N      L ++
Sbjct: 133 G-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLF 191

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKC 641
           ++MR   +  ++ T  ILV A   L AL QG+ +H  LIK       ++  +L+D+YAKC
Sbjct: 192 NRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKC 251

Query: 642 GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVL 701
           G + DA  +F ++   + V W AM+VG  Q+G  EE LKLF   +   V P+ VT   V 
Sbjct: 252 GVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVF 311

Query: 702 SACS 705
           S+CS
Sbjct: 312 SSCS 315



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 168/339 (49%), Gaps = 35/339 (10%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H +I+     PD F+   L+ MY++CG +  +R +FD+  DR++ SW+S++A Y  
Sbjct: 122 GRKVHCQIVKFGN-PDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQ 180

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
           +         +G  LF  +RE +   +++TL  L+  C   G +   + +HGY +K G+ 
Sbjct: 181 NNLAQ-----DGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIE 235

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
              ++  AL+++Y+K G +R+A+ +FD +   D+V W  M+  Y +NG  EE   LF+  
Sbjct: 236 LGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQK 295

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKL-----LLYN------------- 292
            +  + P+D ++  V    S L   +    +   +IKL     ++ N             
Sbjct: 296 EQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNR 355

Query: 293 ---------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
                    ++ +VV WN  +S + Q G  + A+E F  M   +V  D+VT +  L+A A
Sbjct: 356 DARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACA 415

Query: 344 GTDNLNLGQQIHGTTLKSGFYSA-VIVGNSLINMYSKMG 381
             + L +G   H   +K G  S+ V VG +L+  Y+K G
Sbjct: 416 SLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCG 454



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 143/597 (23%), Positives = 247/597 (41%), Gaps = 104/597 (17%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           HA ++      D   +  L+++Y   G L  AR +FD +P  D +SW  I+  Y  + E 
Sbjct: 25  HAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE- 83

Query: 136 NAENVTEGFR----LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                   FR     +  +R  +     +  + +LK C  S        VH   +K G  
Sbjct: 84  --------FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNP 135

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D FV   LV++Y+K G+I  ++ +FD   +R+V  W  M+  Y +N   ++   LF  +
Sbjct: 136 -DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRM 194

Query: 252 HRSGLCPDDESVQCVLGVI----SDLGKRHEEQ-VQAYAIK-------------LLLYN- 292
               +    E+ Q  LG++      LG  H+ + +  Y IK             L LY  
Sbjct: 195 REELI----EANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAK 250

Query: 293 --------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                         +  ++V W   + GY Q G    A++ F+   +  V  + VT    
Sbjct: 251 CGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASV 310

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSG------------FYSA------------------VI 368
            ++ +   NLNLG+ IHG ++K G            FY+                   V+
Sbjct: 311 FSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVV 370

Query: 369 VGNSLINMYSKMGC------------VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
             NS+I+ +S+ G             +  +  D  TL SVL A +SL   L +    H +
Sbjct: 371 AWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASL-NALQVGSSFHAY 429

Query: 417 AIKNDTVADS-FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
           A+K   ++ + +V TAL+  Y + G    A  +F+  D     TW+AMI GY +  N   
Sbjct: 430 AVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRG 489

Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG--- 532
           +L +F  M  +  + +E    + + AC    M+ +G ++     +   + +L  S+    
Sbjct: 490 SLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQ---DYNLVPSTKHYT 546

Query: 533 -ILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLA-LSIYHQMRL 586
            ++D+  + G + +A      +P   DV+ +   + GC  +   DL  L+I   + L
Sbjct: 547 CMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLEL 603



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 2/237 (0%)

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           +MHAY +  G   DL  S+ ++ +Y   G +  A+ +F+ IP PD ++W  +I     N 
Sbjct: 23  EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82

Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
           E    +  Y++MR+     D   F+ ++KA S     ++GR++H  ++K   + D FV  
Sbjct: 83  EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFT 141

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
            LVDMYAKCG IE +  +F +   RN   W++M+ G  Q+   ++ L LF  M+   +E 
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEA 201

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           + +T   ++ AC   G + +  +  H    K GIE      + L+D   + G  ++A
Sbjct: 202 NQITLGILVHACKKLGALHQG-KWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDA 257



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 9/249 (3%)

Query: 27  TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
           T    P  +L L  FLQK   +   +     S+        +L LG+S H   +      
Sbjct: 280 TQNGCPEEALKL--FLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGS-R 336

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D  +TN+L+  Y++C     AR +F+ + DRD+++WNSI++A++ +G     +  E   L
Sbjct: 337 DPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNG-----SAYEALEL 391

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE-FVSGALVNIYS 205
           F  +R        +TL  +L  C S   +    + H YA+K GL+    +V  AL+  Y+
Sbjct: 392 FHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYA 451

Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
           K G    A+ +FDGM ++  V W  M+  Y   G G     +F D+ ++ L P++E    
Sbjct: 452 KCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTS 511

Query: 266 VLGVISDLG 274
           +L   S  G
Sbjct: 512 ILSACSHTG 520


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 224/760 (29%), Positives = 363/760 (47%), Gaps = 99/760 (13%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY----------------- 204
           LA LL+         + + +HG+ +++G+  D ++   L+++Y                 
Sbjct: 9   LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68

Query: 205 --------------SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
                          K G + EA  +FDGM ERDVV W  M+      GF E+   ++  
Sbjct: 69  VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128

Query: 251 LHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA--------------------- 283
           +   G  P   ++  VL   S +     G R H   V+                      
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188

Query: 284 ---YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
              Y +++    +  N V +   + G  +      A++ F  M    VQ DSV     L+
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248

Query: 341 AVA---GTDNLN------LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
             A   G D+L+      LG+QIH   L+ GF   + + NSL+ +Y+K            
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAK--------NKDM 300

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS--TALID-------VYC----- 437
             A ++ A   +PE   +S  I +     +  +D  V   T + D       V C     
Sbjct: 301 NGAELIFAE--MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358

Query: 438 ---RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
              R+G +     +F +     ++ WNAM+ GY    +  +A+  F  M     + D+ T
Sbjct: 359 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           ++  + +C  L  L+ GKQ+H   +++    +  + SG++ +Y +C  M  ++ IF+D  
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478

Query: 555 APDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQG 612
              D+A W +MISG   N  +  AL ++ +M  + V+ P+E +FA ++ + S L +L  G
Sbjct: 479 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 538

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           RQ H  ++K    SD FV  +L DMY KCG I+ A   F  +  +NTV+WN M+ G   +
Sbjct: 539 RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 598

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G G+E + L+  M + G +PD +TF+ VL+ACS++GLV    E    M+  +GIEPE++H
Sbjct: 599 GRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDH 658

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y  +VD LGRAGR ++A +L  + P+++S+ +   LL +CRV GD    + VAEKLM L+
Sbjct: 659 YICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P  S+AYVLLSN +++  QWDD  + +G M +  V K P 
Sbjct: 719 PQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 185/696 (26%), Positives = 306/696 (43%), Gaps = 82/696 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+LR        L GK  H  I+      D +L N L+ +Y  CG   YAR++FD+M  R
Sbjct: 11  SLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR 70

Query: 118 DLISWNSILAAYAHSGE-GNAENVTEGFR-------------------------LFRSLR 151
           D+ SWN+ L      G+ G A  V +G                           +++ + 
Sbjct: 71  DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130

Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
                 SR TLA +L  C            HG A+K GL  + FV  AL+++Y+K G I 
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190

Query: 212 EAKF-LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV- 269
           +    +F+ + + + V +  ++   A      E   +F  +   G+  D   +  +L + 
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250

Query: 270 --------ISDL-GKRHEEQVQAYAIKLL----LYNNNS--------------------- 295
                   +S++ G    +Q+   A++L     L+ NNS                     
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310

Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
              NVV WN  + G+ Q   +  ++E    M  S  Q + VT +  L A   + ++  G+
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370

Query: 353 QIHGTTLKSGF--YSAVIVGNSLINMYSKMGCVCGLRTDQF-------TLASVLRASSSL 403
           +I  +  +     ++A++ G S    Y +   +   R  QF       T  SV+ +S + 
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEA--ISNFRQMQFQNLKPDKTTLSVILSSCAR 428

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNA 462
              L   KQIH   I+ +   +S + + LI VY     M  +E +F++  +  D+A WN+
Sbjct: 429 LRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNS 488

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           MI G+  +    KAL LF  MH +     +E + AT + +C  L  L  G+Q H   +KS
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS 548

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
           G+  D  V + + DMY KCG +  A+  F+ +   + V W  MI G   NG  D A+ +Y
Sbjct: 549 GYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYA 639
            +M  SG  PD  TF  ++ A S    +E G +I +++ ++    +P +   I +VD   
Sbjct: 609 RKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH-GIEPELDHYICIVDCLG 667

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
           + G +EDA  L +    + ++VLW  +L     HG+
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/587 (24%), Positives = 258/587 (43%), Gaps = 70/587 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV-YARRLFDKMPD 116
           S+L       D + G   H   + +    + F+ N L++MY++CG +V Y  R+F+ +  
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE------SITFTSRLTLAPLLKLCL 170
            + +S+ +++   A   +     V E  ++FR + E      S+  ++ L+++   + C 
Sbjct: 203 PNEVSYTAVIGGLARENK-----VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257

Query: 171 SSGYVWASE---TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           S   ++ +E    +H  AL++G   D  ++ +L+ IY+K   +  A+ +F  M E +VV 
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
           W +M+  + +    ++       +  SG  P++ +   VLG     G     +    +I 
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                   +V  WN  LSGY        AI  F  M   N++ D  T  V L++ A    
Sbjct: 378 ------QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF 431

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------MGC----VC 384
           L  G+QIHG  +++       + + LI +YS+                   + C    + 
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 491

Query: 385 GLR----------------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
           G R                       ++ + A+VL + S L   LH  +Q H   +K+  
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH-GRQFHGLVVKSGY 550

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V+DSFV TAL D+YC+ G +  A   F+     +   WN MI GY  +    +A+ L+  
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCG 541
           M +SGE+ D IT  + + AC    +++ G ++ +   +  G E +L     I+D   + G
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 670

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ-MRL 586
            + DA+ +    P     V W  ++S C  +G+  LA  +  + MRL
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 717


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 187/536 (34%), Positives = 282/536 (52%), Gaps = 62/536 (11%)

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           ++  Y R G M EA  LF+     D+ TW A++ GY  +    +A  +F  M    ER +
Sbjct: 105 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP---ER-N 160

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS----SGILDMYVKCGAMVDAQ 547
            ++    V A     M+ + K++        F +  C +    + +L  Y + G + +A+
Sbjct: 161 AVSWNAMVAAYIQRRMMDEAKEL--------FNMMPCRNVASWNTMLTGYAQAGMLEEAK 212

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           ++F+ +P  D V+W  M++     G  +  L ++ +M   G   +   FA ++   + + 
Sbjct: 213 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIA 272

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           ALE G Q+H  LI+       FVG +L+ MY KCGN+EDA   F++M+ R+ V WN M+ 
Sbjct: 273 ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIA 332

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G A+HG G+E L++F+ M+    +PD +T +GVL+ACS++GLV +    F+ M   +G+ 
Sbjct: 333 GYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVT 392

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
            + EHY+ ++D LGRAGR  EA +L+  MPFE  ++M  ALLGA R+  + E G+  AEK
Sbjct: 393 AKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEK 452

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           +  LEP ++  YVLLSNI+A++ +W D    R  M+ + VKK P                
Sbjct: 453 IFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSA 512

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                   + I+A +E L  R+K+ GYV  TD VL DVEEEEKE  L YHSEKLA AYG+
Sbjct: 513 GDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGI 572

Query: 885 ISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPCAD 917
           ++ PP   I   K                           +NRFHH R G C C D
Sbjct: 573 LNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGD 628



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 209/493 (42%), Gaps = 73/493 (14%)

Query: 85  IPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
           + D    N +++ ++  G +  AR  FD  P++D +SWN +LAAY  +G      V E  
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGR-----VEEAR 57

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYV-W-----ASETVHGYALKIGLVWDEFVSG 198
            LF S  E    +            L SGYV W     A E       +  + W+  VSG
Sbjct: 58  GLFNSRTEWDVISWN---------ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSG 108

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
                Y++ G + EA+ LFD    RDV  W  ++  YA+NG  EE   +F  +      P
Sbjct: 109 -----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM------P 157

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           +  +V     V + + +R  ++ +    +L       NV  WN  L+GY Q G    A  
Sbjct: 158 ERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKA 213

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F  M     Q D+V++   LAA                      YS        + ++ 
Sbjct: 214 VFDTM----PQKDAVSWAAMLAA----------------------YSQGGCSEETLQLFI 247

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
           +MG  CG   ++   A VL   + +   L    Q+H   I+       FV  AL+ +Y +
Sbjct: 248 EMG-RCGEWVNRSAFACVLSTCADIA-ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFK 305

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G+M +A   FE  +  D+ +WN MI GY       +ALE+F  M T+  + D+IT+   
Sbjct: 306 CGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGV 365

Query: 499 VKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           + AC    ++++G        H + + +  E   C    ++D+  + G + +A  +  D+
Sbjct: 366 LAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC----MIDLLGRAGRLAEAHDLMKDM 421

Query: 554 P-APDDVAWTTMI 565
           P  PD   W  ++
Sbjct: 422 PFEPDSTMWGALL 434



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 71/360 (19%)

Query: 72  GKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           G+   AR + NS    D    N LM+ Y + G +  AR LFD+MP RD++SWN +++ YA
Sbjct: 51  GRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 110

Query: 131 HSGE------------------------GNAEN--VTEGFRLFRSLRESITFTSRLTLAP 164
             G+                        G A+N  + E  R+F ++ E    +    +A 
Sbjct: 111 RRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAA 170

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
            ++  +      A E  +    +    W+  ++G     Y++ G + EAK +FD M ++D
Sbjct: 171 YIQRRMMDE---AKELFNMMPCRNVASWNTMLTG-----YAQAGMLEEAKAVFDTMPQKD 222

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHE 278
            V W  ML AY++ G  EE   LF+++ R G   +  +  CVL   +D+       + H 
Sbjct: 223 AVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 282

Query: 279 EQVQA-YAIKLLLYN----------------------NNSNVVLWNKKLSGYLQVGDNHG 315
             ++A Y +   + N                         +VV WN  ++GY + G    
Sbjct: 283 RLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 342

Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG----QQIH---GTTLKSGFYSAVI 368
           A+E F  M  ++ + D +T +  LAA + +  +  G      +H   G T K   Y+ +I
Sbjct: 343 ALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMI 402



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 51/295 (17%)

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V DS     +I  +  +G ++ A + F+     D  +WN M+  Y+ +    +A  LF+ 
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN- 61

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
                                                 S  E D+   + ++  YV+ G 
Sbjct: 62  --------------------------------------SRTEWDVISWNALMSGYVQWGK 83

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           M +A+ +F+ +P  D V+W  M+SG    G+   A  ++     +  V D FT+  +V  
Sbjct: 84  MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD----AAPVRDVFTWTAVVSG 139

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
            +    LE+ R++   + + +  S      ++V  Y +   +++A  LF  M  RN   W
Sbjct: 140 YAQNGMLEEARRVFDAMPERNAVS----WNAMVAAYIQRRMMDEAKELFNMMPCRNVASW 195

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           N ML G AQ G  EE   +F+ M     + D+V++  +L+A S  G   E  + F
Sbjct: 196 NTMLTGYAQAGMLEEAKAVFDTMP----QKDAVSWAAMLAAYSQGGCSEETLQLF 246



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 9/201 (4%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +L  F++        + S +  +L      + L  G   H R++ +      F+ N L+ 
Sbjct: 242 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 301

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY +CG++  AR  F++M +RD++SWN+++A YA  G G      E   +F  +R + T 
Sbjct: 302 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK-----EALEIFDMMRTTSTK 356

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYAL--KIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +TL  +L  C  SG V      + Y++    G+         ++++  + G++ EA 
Sbjct: 357 PDDITLVGVLAACSHSGLV-EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAH 415

Query: 215 FLFDGMQ-ERDVVLWKVMLRA 234
            L   M  E D  +W  +L A
Sbjct: 416 DLMKDMPFEPDSTMWGALLGA 436



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           +P  D V +  MIS   ++G   LA   +        V      A  V+       +E+ 
Sbjct: 1   MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGR----VEEA 56

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           R +  +  + D  S      +L+  Y + G + +A  LF +M  R+ V WN M+ G A+ 
Sbjct: 57  RGLFNSRTEWDVIS----WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR 112

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G+  E  +LF+         D  T+  V+S  +  G++ EA   F  M E+  +      
Sbjct: 113 GDMVEARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----- 163

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           ++ +V A  +     EA EL   MP    AS +  L G
Sbjct: 164 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTG 201


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 236/802 (29%), Positives = 378/802 (47%), Gaps = 105/802 (13%)

Query: 180 TVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           T+HG  +K GL   D  V  A +  Y +   +  A  LFD M +RD + W  ++     +
Sbjct: 8   TIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRS 67

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNNNSNV 297
           G  E+   LF ++  SG    D ++  +L V S+  G     Q+  Y ++L L    SNV
Sbjct: 68  GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL---ESNV 124

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ-YDSV-TFLVALAAVAGTDNLNLGQQIH 355
            + N  +  Y + G    + + F +M   N+  ++S+ +    L  V   D + L  ++ 
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYV--DDAIGLLDEME 182

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGC------------VCGLRTDQFTLASVLRASSSL 403
              LK      ++  NSL++ Y+  G             + GL+    +++S+L+A +  
Sbjct: 183 ICGLKPD----IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE- 237

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           P  L L K IH + ++N    D +V T LID+Y + G +  A  +F+  D  ++  WN++
Sbjct: 238 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           + G   +     A  L   M   G + D IT  +       L     GK   A       
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL-----GKPEKA------- 345

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
            LD+             G M +         AP+ V+WT + SGC  NG    AL ++ +
Sbjct: 346 -LDVI------------GKMKEKGV------APNVVSWTAIFSGCSKNGNFRNALKVFIK 386

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M+  GV P+  T + L+K   CL+ L  G+++H   ++ +   D +V  +LVDMY K G+
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           ++ A  +F  +  ++   WN ML+G A  G GEE +  F  M   G+EPD++TF  VLS 
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           C  +GLV E ++ F LMR +YGI P +EH S +VD LGR+G   EA + I +M  +  A+
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
           +  A L +C++  D E  +   ++L  LEP +S+ Y+++ N+++  N+W+DV   R  M+
Sbjct: 567 IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 626

Query: 824 RKNVK------------------------KDPADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
              V+                         D  D+ F ++  L+  +K+ GYVPDT  + 
Sbjct: 627 NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYF-ELYKLVSEMKKSGYVPDTSCIH 685

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTP---PSSV------------------ILSNKE 898
            D+ + EKE+ L  H+EKLA  YGLI      P  V                  +L N+E
Sbjct: 686 QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNRE 745

Query: 899 PLYAN--RFHHLRDGMCPCADN 918
            +     R HH RDG C C D+
Sbjct: 746 IVLQEGARVHHFRDGKCSCNDS 767



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/597 (25%), Positives = 269/597 (45%), Gaps = 59/597 (9%)

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           M  Y RC SL +A +LFD+MP RD ++WN I+     SG  N E   E   LFR ++ S 
Sbjct: 30  MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG--NWEKAVE---LFREMQFSG 84

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
                 T+  LL++C +         +HGY L++GL  +  +  +L+ +YS+ GK+  ++
Sbjct: 85  AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            +F+ M++R++  W  +L +Y + G+ ++   L  ++   GL PD               
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD--------------- 189

Query: 275 KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
                                 +V WN  LSGY   G +  AI     M  + ++  + +
Sbjct: 190 ----------------------IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFT 392
               L AVA   +L LG+ IHG  L++  +  V V  +LI+MY K G +   R   D   
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287

Query: 393 LASVLRASSSLPEGLHL------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA- 445
             +++ A +SL  GL        ++ + +   K     D+    +L   Y   G   +A 
Sbjct: 288 AKNIV-AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346

Query: 446 ---EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
                + E     ++ +W A+  G   + N   AL++F  M   G   +  T++T +K  
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
           GCL +L  GK++H + ++     D  V++ ++DMY K G +  A  IF  I      +W 
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            M+ G    G  +  ++ +  M  +G+ PD  TF  ++        +++G + + +L++ 
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMRS 525

Query: 623 DCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
                P +     +VD+  + G +++A+   + M ++ +  +W A L     H + E
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLE 582



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/585 (21%), Positives = 233/585 (39%), Gaps = 101/585 (17%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H  +L      +  + N+L+ MYSR G L  +R++F+ M DR+L SWNSIL++Y  
Sbjct: 108 GRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK 167

Query: 132 SG----------EGNAENVTEGFRLFRSL----------RESITFTSRLTLA-------- 163
            G          E     +      + SL          +++I    R+ +A        
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227

Query: 164 --PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
              LL+     G++   + +HGY L+  L +D +V   L+++Y K G +  A+ +FD M 
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
            +++V W  ++   +     ++   L + + + G+ PD  +   +    + LGK   E+ 
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK--PEKA 345

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                K+       NVV W    SG  + G+   A++ F+ M    V  ++ T    L  
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
           +     L+ G+++HG  L+        V  +L++MY K G                    
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG-------------------- 445

Query: 402 SLPEGLHLSKQIHVH-AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
                  L   I +   IKN ++A                                  +W
Sbjct: 446 ------DLQSAIEIFWGIKNKSLA----------------------------------SW 465

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
           N M+ GY +     + +  FS M  +G   D IT  + +  C    ++++G + +   M+
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMR 524

Query: 521 SGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           S + +   +   S ++D+  + G + +A      +   PD   W   +S C      DL 
Sbjct: 525 SRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC--KIHRDLE 582

Query: 578 LSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIK 621
           L+     RL  + P +   + +++   S L   E   +I  NL++
Sbjct: 583 LAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR-NLMR 626



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 71/317 (22%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           + L   ++++L  +Q +    S+SS    S+L+       L LGK+ H  IL +    D 
Sbjct: 203 KGLSKDAIAVLKRMQIAGLKPSTSSIS--SLLQAVAEPGHLKLGKAIHGYILRNQLWYDV 260

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDR------------------------------- 117
           ++   L+ MY + G L YAR +FD M  +                               
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320

Query: 118 ----DLISWNSILAAYAHSG--------------EGNAENVTEGFRLFRSLRESITFTSR 159
               D I+WNS+ + YA  G              +G A NV     +F    ++  F + 
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380

Query: 160 L----------------TLAPLLKL--CLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           L                T++ LLK+  CLS   + + + VHG+ L+  L+ D +V+ ALV
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLS--LLHSGKEVHGFCLRKNLICDAYVATALV 438

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y K G ++ A  +F G++ + +  W  ML  YA  G GEE    F  +  +G+ PD  
Sbjct: 439 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 498

Query: 262 SVQCVLGVISDLGKRHE 278
           +   VL V  + G   E
Sbjct: 499 TFTSVLSVCKNSGLVQE 515



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 19  IFSSFTKD-TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
           IFS  +K+  +RN      +L  F++        +++   ++L+     S L  GK  H 
Sbjct: 367 IFSGCSKNGNFRN------ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
             L  + I D ++   L+ MY + G L  A  +F  + ++ L SWN +L  YA  G G  
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE- 479

Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
               EG   F  + E+      +T   +L +C +SG V
Sbjct: 480 ----EGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLV 513


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 205/681 (30%), Positives = 344/681 (50%), Gaps = 33/681 (4%)

Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
           L+ C     +  ++++H   +K+GL    F+  +++++Y+K  +  +A+ LFD M  R++
Sbjct: 10  LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69

Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE----SVQCVLGVISD--LGKRHEE 279
           V +  M+ A+  +G   E   L+  +  S     ++    +V    G++ D  LG    +
Sbjct: 70  VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
            V    ++        + VL N  L  Y++ G    A   F  +   N    +   L   
Sbjct: 130 HVSEARLEF-------DTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHA 182

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS----------LINMYSKMGCVCGLRTD 389
                 D  NL  Q+    L S  ++++I G +          L  M+ K     GL+ D
Sbjct: 183 KQGLMRDAFNLFDQMPEPDLVS--WNSIIAGLADNASPHALQFLSMMHGK-----GLKLD 235

Query: 390 QFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF 449
            FT    L+A   L E L + +QIH   IK+      +  ++LID+Y     + EA  +F
Sbjct: 236 AFTFPCALKACGLLGE-LTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIF 294

Query: 450 ENKDGF--DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
           +        LA WN+M+ GY+ + +  +AL + + MH SG + D  T + A+K C     
Sbjct: 295 DKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDN 354

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L+   Q+H   +  G+ELD  V S ++D+Y K G +  A  +F  +P  D VAW+++I G
Sbjct: 355 LRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVG 414

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           C   G   L  S++  M    +  D F  +I++K SS L +L+ G+QIH+  +K    S+
Sbjct: 415 CARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESE 474

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             +  +L DMYAKCG IEDA  LF  +   +T+ W  ++VG AQ+G  ++ + +   M  
Sbjct: 475 RVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIE 534

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
            G +P+ +T +GVL+AC + GLV EA+  F  +  ++G+ P  EHY+ +VD   +AGR K
Sbjct: 535 SGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFK 594

Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           EA  LI  MPF+   ++  +LL AC    +      VAE L+A  P D+S Y++LSN++A
Sbjct: 595 EARNLINDMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNVYA 654

Query: 808 AANQWDDVTSARGEMKRKNVK 828
           +   WD+++  R  +++  +K
Sbjct: 655 SLGMWDNLSKVREAVRKVGIK 675



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 153/620 (24%), Positives = 269/620 (43%), Gaps = 124/620 (20%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
           F  ++HA         KS H+ I+        FL N+++++Y++C     AR LFD+MP 
Sbjct: 16  FQAIKHA---------KSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPH 66

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYV 175
           R+++S+ ++++A+ +SG  +     E   L+  + ES T   ++   + +LK C   G V
Sbjct: 67  RNIVSFTTMVSAFTNSGRPH-----EALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDV 121

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                VH +  +  L +D  +  AL+++Y K G + +AK +F  +  ++   W  ++  +
Sbjct: 122 ELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGH 181

Query: 236 AENGFGEEVFHLFVD------------------------------LHRSGLCPDDESVQC 265
           A+ G   + F+LF                                +H  GL  D  +  C
Sbjct: 182 AKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPC 241

Query: 266 VLGVISDLGK------------RHEEQVQAYAI----------KLL-----LYNNNS--- 295
            L     LG+            +   +   Y I          KLL     +++ NS   
Sbjct: 242 ALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLA 301

Query: 296 -NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
            ++ +WN  LSGY+  GD   A+     M  S  Q+DS TF +AL      DNL L  Q+
Sbjct: 302 ESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQV 361

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCV------------------------CG----- 385
           HG  +  G+    +VG+ LI++Y+K G +                        C      
Sbjct: 362 HGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLG 421

Query: 386 --------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                         L  D F L+ VL+ SSSL   L   KQIH   +K    ++  ++TA
Sbjct: 422 TLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLAS-LQSGKQIHSFCLKKGYESERVITTA 480

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           L D+Y + G + +A  LF+     D  +W  +I G   +  + KA+ +   M  SG + +
Sbjct: 481 LTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPN 540

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSI 549
           +ITI   + AC    ++++   +   ++++   L  C    + ++D++ K G   +A+++
Sbjct: 541 KITILGVLTACRHAGLVEEAWTIFK-SIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNL 599

Query: 550 FNDIP-APDDVAWTTMISGC 568
            ND+P  PD   W +++  C
Sbjct: 600 INDMPFKPDKTIWCSLLDAC 619



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 121/215 (56%), Gaps = 5/215 (2%)

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           +D   I  A++ CG    +K  K +H+  +K G    + + + I+ +Y KC    DA+++
Sbjct: 1   MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTL 60

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTA 608
           F+++P  + V++TTM+S   ++G    AL++Y+ M  S  V P++F ++ ++KA   +  
Sbjct: 61  FDEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGD 120

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           +E G  +H ++ +     D  +  +L+DMY KCG++ DA  +F ++  +N+  WN +++G
Sbjct: 121 VELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILG 180

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
            A+ G   +   LF+ M     EPD V++  +++ 
Sbjct: 181 HAKQGLMRDAFNLFDQMP----EPDLVSWNSIIAG 211



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 46  HFSSSSSSSQWFSI-LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
           H S +   S  FSI L+  I   +L L    H  I+      D  + + L+ +Y++ G++
Sbjct: 331 HHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNI 390

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
             A RLF+++P++D+++W+S++   A  G G     T  F LF  +           L+ 
Sbjct: 391 NSALRLFERLPNKDVVAWSSLIVGCARLGLG-----TLVFSLFMDMVHLDLEIDHFVLSI 445

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           +LK+  S   + + + +H + LK G   +  ++ AL ++Y+K G+I +A  LFD + E D
Sbjct: 446 VLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEID 505

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
            + W  ++   A+NG  ++   +   +  SG  P+  +   +LGV++    RH   V+
Sbjct: 506 TMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKIT---ILGVLT--ACRHAGLVE 558


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 213/688 (30%), Positives = 319/688 (46%), Gaps = 114/688 (16%)

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---CVC----GLRTDQF 391
           L A A + +L  G Q+HG   K GF S  ++GN+LI+MY K G     C    G+R    
Sbjct: 11  LRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNV 70

Query: 392 T---------------------LASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD----- 425
                                 L  +  AS + P    LS  +    +  DT A      
Sbjct: 71  VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 130

Query: 426 ----------SFVSTALIDVYCRNGSMAEAEYLFENKD-GFDLATWNAMIFGYILSNNSH 474
                       V+++L+ VY + G + +A  +F+    G  +ATWNAM+ GY  + +  
Sbjct: 131 LCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGR 190

Query: 475 KALELFSHM--HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVS 530
            AL +F  M  H    + DE T A+ +KAC  L   ++G Q+HA    SGF    +  ++
Sbjct: 191 DALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILA 250

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
             ++DMYVKC  +  A  +F  +   + + WT ++ G    G+   AL ++ +   SG  
Sbjct: 251 GALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGAR 310

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD    + +V   +    +EQGRQ+H   IK    +D   G S+VDMY KCG  ++A  +
Sbjct: 311 PDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERM 370

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F++M   N V W  M+ GL +HG G E + LFE+M+A GVEPD VT++ +LSACS+ GLV
Sbjct: 371 FREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLV 430

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E    F  +R    + P+ EHY+ +VD LGRAG  +EA +LI +MP E +  + + LL 
Sbjct: 431 DECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLS 490

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV  D   G+   + L+A++  +   YV LSN+ A A +W +    R  M+R+ +KK 
Sbjct: 491 ACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQ 550

Query: 831 --------------------------PADLIFAKVEGLIKRIKE--GGYVPDTDFVLLDV 862
                                      A  I   +  +  R++E  G    D  F L DV
Sbjct: 551 GGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFALHDV 610

Query: 863 EEEEKERALYYHSEKLA-------------------RAY--------------GLISTPP 889
           +EE +  +L  HSE+LA                   R Y              GL +   
Sbjct: 611 DEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVR 670

Query: 890 SSVILSNKEPLYANRFHHLRDGMCPCAD 917
            ++++ +     ANRFH    G C C D
Sbjct: 671 RALVVRD-----ANRFHRFEHGSCSCKD 693



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 200/430 (46%), Gaps = 56/430 (13%)

Query: 390 QFTLASVLRAS---SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           Q  +A +LRAS   SSL  G+    Q+H    K    +D+ +   LID+Y + G +  A 
Sbjct: 4   QKMIAGLLRASARSSSLRGGV----QLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLAC 59

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCL 505
            +F      ++ +W A++ G++   ++   L L   M T+ E   +E T++ ++KAC  +
Sbjct: 60  EVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVV 119

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTM 564
                G  +H   +++G++    V+S ++ +Y K G + DA+ +F+       +A W  M
Sbjct: 120 GDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAM 179

Query: 565 ISGCVDNGEEDLALSIYHQMRL--SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK- 621
           +SG    G    AL ++ +MR       PDEFTFA L+KA S L A  +G Q+HA +   
Sbjct: 180 VSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTAS 239

Query: 622 -LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
               +S+  +  +LVDMY KC  +  A  +F++++ +N + W A++VG AQ G   E L+
Sbjct: 240 GFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALE 299

Query: 681 LFEDMKAHGVEPDS---VTFIGVLSACSYT------------------------------ 707
           LF      G  PDS    + +GVL+  +                                
Sbjct: 300 LFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYL 359

Query: 708 --GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM---PFEASA 762
             GL  EA   F  MR      P V  ++ +V+ LG+ G  +EA  L   M     E   
Sbjct: 360 KCGLPDEAERMFREMR-----APNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDE 414

Query: 763 SMHRALLGAC 772
             + ALL AC
Sbjct: 415 VTYLALLSAC 424



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 159/377 (42%), Gaps = 44/377 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
            +LR +  +S L  G   H  I       D  L NNL+ MY +CG L  A  +F  M DR
Sbjct: 9   GLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDR 68

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSGYVW 176
           +++SW +++  +   G     + T   RL   +R  S    +  TL+  LK C   G   
Sbjct: 69  NVVSWTALMVGFLRHG-----DATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAY 235
           A   +HG  ++ G    + V+ +LV +YSK G+I +A+ +FDG      +  W  M+  Y
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGY 183

Query: 236 AENGFGEEVFHLFVDL--HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQA--------- 283
           A  G G +   +F ++  H     PD+ +   +L   S LG  R   QV A         
Sbjct: 184 AHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 243

Query: 284 ---------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                                 A+++       NV+ W   + G+ Q G    A+E F  
Sbjct: 244 ASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRR 303

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
             RS  + DS      +  +A    +  G+Q+H   +K    + V  GNS+++MY K   
Sbjct: 304 FWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLK--- 360

Query: 383 VCGLRTDQFTLASVLRA 399
            CGL  +   +   +RA
Sbjct: 361 -CGLPDEAERMFREMRA 376



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 194/492 (39%), Gaps = 91/492 (18%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           +A LL+    S  +     +HG   K+G   D  +   L+++Y K G++  A  +F GM+
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDESVQ------CVLG------ 268
           +R+VV W  ++  +  +G       L  ++   S   P++ ++       CV+G      
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 269 VISDLGKR---HEEQVQAYAIKLLLYNN----------------NSNVVLWNKKLSGYLQ 309
            I  L  R    E  V A ++ +L+Y+                  S +  WN  +SGY  
Sbjct: 127 GIHGLCVRAGYQEHDVVASSL-VLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185

Query: 310 VGDNHGAIECFVNMIRSNVQY--DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA- 366
            G    A+  F  M R   Q+  D  TF   L A +G      G Q+H     SGF +A 
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS 245

Query: 367 -VIVGNSLINMYSKM-------------------------------GCVC---------- 384
             I+  +L++MY K                                G V           
Sbjct: 246 NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFW 305

Query: 385 --GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
             G R D   L+SV+   +     +   +Q+H + IK+ T  D     +++D+Y + G  
Sbjct: 306 RSGARPDSHVLSSVVGVLADFAL-VEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLP 364

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            EAE +F      ++ +W  M+ G        +A+ LF  M   G   DE+T    + AC
Sbjct: 365 DEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 424

Query: 503 GCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
               ++ + ++  +       ++   E   C    ++D+  + G + +A+ +   +P   
Sbjct: 425 SHAGLVDECRRYFSCIRRDRTVRPKAEHYAC----MVDLLGRAGELREARDLIRTMPMEP 480

Query: 558 DVA-WTTMISGC 568
            V  W T++S C
Sbjct: 481 TVGVWQTLLSAC 492



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 7/205 (3%)

Query: 72  GKSTHARILNS--SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           G   HA +  S  S   +  L   L+ MY +C  L  A ++F+++  +++I W +++  +
Sbjct: 229 GAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGH 288

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           A  G+     VTE   LFR    S        L+ ++ +      V     VH Y +K  
Sbjct: 289 AQEGQ-----VTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDP 343

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D     ++V++Y K G   EA+ +F  M+  +VV W  M+    ++G G E   LF 
Sbjct: 344 TGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFE 403

Query: 250 DLHRSGLCPDDESVQCVLGVISDLG 274
           ++   G+ PD+ +   +L   S  G
Sbjct: 404 EMRAGGVEPDEVTYLALLSACSHAG 428


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 194/573 (33%), Positives = 284/573 (49%), Gaps = 85/573 (14%)

Query: 430 TALIDVYCRNGSMAEAEYLFEN--KDGFD--LATWNAMIFGYILSNNSHKALELFSHMHT 485
           +ALI  +  +G    A  L E    DG +  + TWN ++ G   S  +  A+     MH 
Sbjct: 90  SALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHG 149

Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
            G   D   ++ A+ A G +  +  G+Q+H Y +K+G  LD CV++ ++DMY KCG   +
Sbjct: 150 EGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADE 209

Query: 546 AQSIFNDIPAPDD-----------------------------------VAWTTMISGCVD 570
              +F++    D                                    V+WT++++ CV 
Sbjct: 210 IVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQ 269

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           NG +  A+ ++ +M+  G+ P+  T   ++ A + + AL  GR  H   ++     D +V
Sbjct: 270 NGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYV 329

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
           G +LVDMYAKCG + DA ++F+ M  RN V WNAM+ G A HG  E  ++LF  M++   
Sbjct: 330 GSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKE 389

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           +PD VTF  VL ACS  G   E    F+ M+ K+GI P +EHY+ +V  LGRAG+  +A 
Sbjct: 390 KPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAY 449

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           ++I  MPFE    +  +LLG+CRV G+    +  AE L  LEP ++  YVLLSNI+A+  
Sbjct: 450 DIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKK 509

Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
            WD V   R  MK   +KK+                           I  K++ L   ++
Sbjct: 510 MWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMR 569

Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PSSVILS--------- 895
             G+ P TD+VL DVEE+EK+  L  HSEKLA A GLIST    P  VI +         
Sbjct: 570 RLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHE 629

Query: 896 --------NKEPLY---ANRFHHLRDGMCPCAD 917
                    +  +Y    NRFHH +DG C CAD
Sbjct: 630 AMKFISSFERREIYVRDTNRFHHFKDGKCSCAD 662



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 216/493 (43%), Gaps = 73/493 (14%)

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           G+  D FV+ +L++ Y +FG   +A+ + DGM  R VV W  ++ A+A +G  E  + L 
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
             +   G+ P                                     NV+ WN  +SG  
Sbjct: 110 ERMRSDGVEP-------------------------------------NVITWNGLVSGLN 132

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G    A+   V M       D+     AL+AV    ++ +G+Q+HG  +K+G      
Sbjct: 133 RSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDAC 192

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           V  +LI+MY K G     R D+  +  V   SS +                     D   
Sbjct: 193 VATALIDMYGKCG-----RADE--IVRVFDESSHM---------------------DVAS 224

Query: 429 STALIDVYCRNGSMAEAEYLFENKDG----FDLATWNAMIFGYILSNNSHKALELFSHMH 484
             AL+    RN  ++EA  LF    G     ++ +W +++   + +    +A++LF  M 
Sbjct: 225 CNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQ 284

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
           + G   + +TI   + A   +  L  G+  H ++++ GF  D+ V S ++DMY KCG + 
Sbjct: 285 SEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVR 344

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           DA+ IF  +P  + V+W  MI G   +GE + A+ ++  M+ S   PD  TF  ++ A S
Sbjct: 345 DARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACS 404

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
                E+GR  + N ++      P +     +V +  + G ++DAY +  QM    +  +
Sbjct: 405 QAGWTEEGRS-YFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCI 463

Query: 662 WNAMLVGLAQHGN 674
           W ++L     HGN
Sbjct: 464 WGSLLGSCRVHGN 476



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 9/205 (4%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR----DLISWNSILAAYAHSG 133
           R+ + S   D    N L+   SR   +  A RLF +   R    +++SW SI+A    +G
Sbjct: 212 RVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNG 271

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
                   E   LFR ++      + +T+  +L    +   +    + H ++L+ G   D
Sbjct: 272 RD-----LEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHD 326

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
            +V  ALV++Y+K G++R+A+ +F+ M  R+VV W  M+  YA +G  E    LF  +  
Sbjct: 327 IYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQS 386

Query: 254 SGLCPDDESVQCVLGVISDLGKRHE 278
           S   PD  +  CVLG  S  G   E
Sbjct: 387 SKEKPDLVTFTCVLGACSQAGWTEE 411



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 132/327 (40%), Gaps = 67/327 (20%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG------------- 133
           D F+ ++L+  Y R G+   AR + D MP R ++ W++++AA+A  G             
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113

Query: 134 -EGNAENV------TEGFRLFRSLRESITFTSR------LTLAPLLKLCLSS----GYVW 176
            +G   NV        G       R+++    R      L  A  +   LS+    G V 
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             E +HGY +K G   D  V+ AL+++Y K G+  E   +FD     DV     ++   +
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSN 296
            N    E   LF +    G+                                       N
Sbjct: 234 RNAQVSEALRLFREFVGRGI-------------------------------------ELN 256

Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           VV W   ++  +Q G +  A++ F  M    ++ +SVT    L A A    L  G+  H 
Sbjct: 257 VVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHC 316

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCV 383
            +L+ GF+  + VG++L++MY+K G V
Sbjct: 317 FSLRKGFHHDIYVGSALVDMYAKCGRV 343



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 15/170 (8%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ G+S H   L      D ++ + L+ MY++CG +  AR +F+ MP R+++SWN+++  
Sbjct: 308 LMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGG 367

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETVHG 183
           YA  GE  AEN     RLFRS++ S      +T   +L  C  +G+      + +E  H 
Sbjct: 368 YAMHGE--AENAV---RLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHK 422

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
           + +   +  + +    +V +  + GK+ +A  + + M  E D  +W  +L
Sbjct: 423 HGISPRM--EHY--ACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLL 468



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           S D FV  SL+  Y + G   DA  +   M  R  V W+A++   A HG+ E    L E 
Sbjct: 52  SRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLER 111

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M++ GVEP+ +T+ G++S  + +G   +A      M  + G  P+    S  + A+G  G
Sbjct: 112 MRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGE-GFLPDATGVSCALSAVGDVG 170


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  318 bits (815), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 187/575 (32%), Positives = 300/575 (52%), Gaps = 47/575 (8%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           +++ L++ L A++ +     + +Q H +A+K+      +V  A++ +YC+   + +A  +
Sbjct: 107 NEYVLSTALSAAAHV-RSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKV 165

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
           FEN  GFD+  +N+MI G++       ++ +   M    E+ D ++    +  C     L
Sbjct: 166 FENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKEL 225

Query: 509 KQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC 568
             G Q+HA A+K   E ++ V S ++DMY KC    DA S F  +P  + V+WT +++  
Sbjct: 226 LLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAY 285

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
             N   + AL ++  + + GV P+EFT+A+ + + + L AL+ G  + A+ +K       
Sbjct: 286 TQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGAL 345

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            V  +L++MY+K G+I DA+ +F  M  R+ V WN++++G A HG   E + +F DM   
Sbjct: 346 SVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLA 405

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
            + P  VTF+GVL AC+  GLV E     ++M ++ GI+P  EHY+ +V  L RAGR  E
Sbjct: 406 EIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDE 465

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A + ILS          ++LL +C+V  +   G  VAE+++ L+P D   YVLLSN++A 
Sbjct: 466 AEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAK 525

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
           AN+WD V   R  M+ + V+K+P                        + I  K++ LI +
Sbjct: 526 ANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQ 585

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLYAN-- 903
           IK  GYVP+   VL DVE E+KE  L YHSEK+A A+GLI +P    I   K     +  
Sbjct: 586 IKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRICDDC 645

Query: 904 ---------------------RFHHLRDGMCPCAD 917
                                RFH + DG+C C D
Sbjct: 646 HVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDD 680



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 159/349 (45%), Gaps = 46/349 (13%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           +L  GK+ HA+++ ++   D    N+L+  Y +CG L  AR++FD MP R+ +S N +++
Sbjct: 26  ELCTGKAIHAQMIRAAHF-DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMS 84

Query: 128 AYAHSGEGNAENVTEGFRLFR----SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
            YA +G       ++   L +    SL E +  T+ L+ A  ++   S G        HG
Sbjct: 85  GYASAGRH-----SDALALLKAADFSLNEYVLSTA-LSAAAHVR---SYGM---GRQCHG 132

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           YA+K GL    +V  A++++Y +   + +A  +F+ +   D+  +  M+  + + G  + 
Sbjct: 133 YAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDG 192

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISD--------------LGKRHEEQVQAYAIKLL 289
              +   +       D  S   VLG  +               L +R E+ V   +  + 
Sbjct: 193 SIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVD 252

Query: 290 LYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y                   NVV W   ++ Y Q      A++ F+++    V+ +  T
Sbjct: 253 MYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFT 312

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           + VAL + AG   L  G  +  + +K+G + A+ V N+L+NMYSK G +
Sbjct: 313 YAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSI 361



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 5/219 (2%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + ++L H  ST +LLLG   HA+ L      + ++ + L+ MY +C     A   F+ +P
Sbjct: 212 YVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLP 271

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +++++SW +++ AY  +     E   +  +LF  L       +  T A  L  C     +
Sbjct: 272 EKNVVSWTAVMTAYTQN-----ERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAAL 326

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +   A+K G      V  AL+N+YSK G I +A  +F  M  RDVV W  ++  Y
Sbjct: 327 KNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGY 386

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           A +G   E   +F D+  + + P   +   VL   + LG
Sbjct: 387 AHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLG 425



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 176/404 (43%), Gaps = 53/404 (13%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           +G+  H   + S      ++ N ++ MY +C  +  A ++F+ +   D+ ++NS++  + 
Sbjct: 126 MGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFL 185

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             GE +        R+ RS+   +     ++   +L  C S+  +     VH  ALK  L
Sbjct: 186 DLGEFDGS-----IRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRL 240

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             + +V  ALV++Y K    R+A   F+ + E++VV W  ++ AY +N   E+   LF+D
Sbjct: 241 EQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLD 300

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
           L   G+ P++ +    L   + L   ++   + A A+K   +   S   + N  ++ Y +
Sbjct: 301 LEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALS---VCNALMNMYSK 357

Query: 310 VGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
            G  H A   F++M  R  V ++SV                +G   HG   +     A+ 
Sbjct: 358 SGSIHDAWRVFLSMPWRDVVSWNSVI---------------IGYAHHGLARE-----AMC 397

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL---PEGLH----LSKQIHVHAIKND 421
           V + ++        +  +     T   VL A + L    EGL+    + K++ +   +  
Sbjct: 398 VFHDML--------LAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREH 449

Query: 422 TVADSFVSTALIDVYCRNGSMAEAE-YLFENKDGFDLATWNAMI 464
                   T ++ + CR G + EAE ++  N  G D+  W +++
Sbjct: 450 Y-------TCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLL 486



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 120/250 (48%), Gaps = 5/250 (2%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L  GK +HA  +++    D+   + ++  Y KCG +  A+ +F+ +P+ + V+   ++SG
Sbjct: 27  LCTGKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSG 85

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
               G    AL++   ++ +    +E+  +  + A++ + +   GRQ H   +K      
Sbjct: 86  YASAGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEH 142

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
           P+V  +++ MY +C ++EDA  +F+ +   +   +N+M+ G    G  + ++++   M  
Sbjct: 143 PYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVG 202

Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
              + D V+++ VL  C+ T  +    +  H    K  +E  V   S LVD  G+    +
Sbjct: 203 EVEQWDHVSYVAVLGHCASTKELLLGCQ-VHAQALKRRLEQNVYVGSALVDMYGKCDCAR 261

Query: 748 EAGELILSMP 757
           +A      +P
Sbjct: 262 DAHSAFEVLP 271


>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 214/706 (30%), Positives = 353/706 (50%), Gaps = 80/706 (11%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY---SKFGKIREAKFLF 217
           T   LLK   + G +     +H + +K G     +++  L+ +Y    KF +I +    F
Sbjct: 23  TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-- 275
           DG    D+V+   M+ AY + G   +   LF ++      P+   V     +IS L K  
Sbjct: 83  DG---SDLVVSNCMISAYVQWGNLVQARLLFDEM------PERNEVSWS-ALISGLMKYG 132

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           R EE +  +       N   NVV W   +SG+++ G N  A++ F  ++ S V+ + VTF
Sbjct: 133 RVEESMWYFE-----RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTF 187

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
              + A     +  LG  I G  +K+GF   + V NSLI +  +MG              
Sbjct: 188 TSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMG-------------- 233

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
                      + L++++     K D V+     TA++D Y   G + EA  +F+     
Sbjct: 234 ----------EIDLARRVFDRMEKRDVVS----WTAILDAYVETGDLREARRIFDEMPER 279

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           +  +W+AMI  Y  S  + +AL+LFS M   G + +    A  + A   L  L  G  +H
Sbjct: 280 NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIH 339

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN------------------------ 551
            +  K G + D+ + S ++D+Y KCG   D + +F+                        
Sbjct: 340 GHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLE 399

Query: 552 -------DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                   IP  +DV+W T+I+G ++N + +  L +++ + +SG  P++ TF+ ++ A +
Sbjct: 400 ETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACA 459

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            + +L++G  +H  +IKL    D FVG +L DMYAKCG+I  +  +F++M  +N + W  
Sbjct: 460 SIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTV 519

Query: 665 MLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           M+ GLA+ G   E+L LFE+M +   V P+ +  + VL ACS+ GLV +    F+ M + 
Sbjct: 520 MIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKV 579

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           YGI+P+ +HY+ +VD L R+GR  EA E I ++PF+  A+   ALL  C+   D +  + 
Sbjct: 580 YGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAER 639

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            A+KL  L   +S+ YVLLSNI+A+A +W DV++ R  M+ K +KK
Sbjct: 640 TAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKK 685



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 236/610 (38%), Gaps = 134/610 (21%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   +   +  G   HA ++ +     R++   L+ +Y  C       ++  +    
Sbjct: 26  SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+  N +++AY   G     N+ +   LF  + E                         
Sbjct: 86  DLVVSNCMISAYVQWG-----NLVQARLLFDEMPE------------------------- 115

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
                    +  + W   +SG +     K+G++ E+ + F+    ++VV W   +  +  
Sbjct: 116 ---------RNEVSWSALISGLM-----KYGRVEESMWYFERNPFQNVVSWTAAISGFVR 161

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCV----------------LGVISDLGKRHEEQV 281
           NG   E   LF  L  SG+ P+D +   V                LG++   G  H   V
Sbjct: 162 NGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSV 221

Query: 282 QAYAIKLLL-------------YNNNSNVVLWNKKLSGYLQVGD---------------- 312
               I L L                  +VV W   L  Y++ GD                
Sbjct: 222 SNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNE 281

Query: 313 ---------------NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
                             A++ F  M++   + +   F   L+A+A    L+ G  IHG 
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGH 341

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
             K G    V +G+SLI++Y    C CG   D             L   L L K +    
Sbjct: 342 VTKIGIDKDVFIGSSLIDLY----CKCGKPDD-----------GRLVFDLILEKNV---- 382

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                        +++  Y  NG + E E LFE     +  +W  +I GY+ +    K L
Sbjct: 383 ---------VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVL 433

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           E+F+ +  SG+  ++ T ++ + AC  +  L +G  +H   +K G + D+ V + + DMY
Sbjct: 434 EVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMY 493

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFT- 595
            KCG +  ++ +F  +P  ++++WT MI G  ++G    +L ++ +M R S V P+E   
Sbjct: 494 AKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELML 553

Query: 596 FAILVKASSC 605
            ++L   S C
Sbjct: 554 LSVLFACSHC 563



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 127/556 (22%), Positives = 215/556 (38%), Gaps = 132/556 (23%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
             +S+L  + K+ F    S S   S++  ++   ++ L +    R+ +  +  D      
Sbjct: 202 LGMSILGLVVKAGFEHYLSVSN--SLITLSLRMGEIDLAR----RVFDRMEKRDVVSWTA 255

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++  Y   G L  ARR+FD+MP+R+ ISW++++A Y+ SG        E  +LF  + + 
Sbjct: 256 ILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAE-----EALKLFSKMVQE 310

Query: 154 ITFTSRL-----TLAPLLKL-CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             F   +     TL+ L  L  LS+G       +HG+  KIG+  D F+  +L+++Y K 
Sbjct: 311 -GFKPNISCFACTLSALASLRALSAGI-----NIHGHVTKIGIDKDVFIGSSLIDLYCKC 364

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           GK  + + +FD + E++VV W  M+  Y+ NG       L        L P+        
Sbjct: 365 GKPDDGRLVFDLILEKNVVCWNSMVGGYSING------RLEETEELFELIPE-------- 410

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                                       N V W   ++GYL+       +E F  ++ S 
Sbjct: 411 ---------------------------KNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSG 443

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
              +  TF   L A A   +L+ G  +HG  +K G    + VG +L +MY+K G      
Sbjct: 444 QTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG------ 497

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                + S  +    +PE   +S                   T +I     +G   E+  
Sbjct: 498 ----DIGSSKQVFERMPEKNEIS------------------WTVMIQGLAESGFAVESLI 535

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATAVKAC 502
           LFE  +       N ++   +L   SH     K L  F+ M                   
Sbjct: 536 LFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSME------------------ 577

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAW 561
                         Y +K   +   CV    +D+  + G + +A+     IP  P+  AW
Sbjct: 578 ------------KVYGIKPKGKHYTCV----VDLLSRSGRLYEAEEFIRTIPFQPEANAW 621

Query: 562 TTMISGCVDNGEEDLA 577
             ++SGC    +E +A
Sbjct: 622 AALLSGCKKYKDEKIA 637


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 209/706 (29%), Positives = 340/706 (48%), Gaps = 92/706 (13%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG-TT 358
           W   L+ Y Q G    A++ +  M   ++Q + V +   L A A    L  G+ IH   +
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRIS 148

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
              G    VI+ NSL+ MY+K G +                                   
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208

Query: 384 -----CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                  +     T  SVL A S+L   L   ++IH       T  D  +  AL+ +Y R
Sbjct: 209 RLYEDMDVEPSVRTFTSVLSACSNLGL-LDQGRKIHALISSRGTELDLSLQNALLTMYAR 267

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
              + +A  +F+     D+ +W+AMI  +  ++   +A+E +S M   G R +  T A+ 
Sbjct: 268 CKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASV 327

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           + AC  +  L+ G+ +H   + +G+++ L   + ++D+Y   G++ +A+S+F+ I   D+
Sbjct: 328 LLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDE 387

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHA 617
             WT +I G    G     L +Y +M+ +  VP  +  ++ ++ A + L A    RQ H+
Sbjct: 388 GLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHS 447

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           ++      SD  +  SLV+MY++ GN+E A  +F +M  R+T+ W  ++ G A+HG    
Sbjct: 448 DIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGL 507

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L L+++M+  G EP  +TF+ VL ACS+ GL  +  + F  ++  Y + P + HYS ++
Sbjct: 508 ALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCII 567

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D L RAGR  +A ELI +MP E +     +LLGA R+  D +     A ++  L+P D +
Sbjct: 568 DLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPA 627

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKK-------DPADL---------------- 834
           +YVLLSN+ A       + S R  M  + VKK       + AD                 
Sbjct: 628 SYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQE 687

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           IFA+++ L  +IKE GYVP+++ VL DV E+EKE  L  HSEKLA A+GLI+T P + + 
Sbjct: 688 IFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLR 747

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                               ++ +E +   ++RFH  RDG C C D
Sbjct: 748 IFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGD 793



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 140/620 (22%), Positives = 256/620 (41%), Gaps = 106/620 (17%)

Query: 29  RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
           R+L    +      ++   S   SS  +   LR      DL   +  H RI  ++   + 
Sbjct: 3   RSLAPAKVRRFQLKEEKAGSRFDSSGHYRDALRQC---QDLESVRQIHDRISGAAS-ANV 58

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FL N ++  Y +CGS+  AR  FD +  ++  SW S+L AYA +G               
Sbjct: 59  FLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGH-------------- 104

Query: 149 SLRESITFTSRLTLAP-------LLKLCLSSGYVWASETVHG-YALKIGLVWDEFVSGAL 200
             R ++    R+ L P       +L  C S   +   + +H   +   GL  D  +  +L
Sbjct: 105 -YRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSL 163

Query: 201 VNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
           + +Y+K G + +AK LF+ M  R V  W  M+ AYA++G  EE   L+ D+    + P  
Sbjct: 164 LTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSV 220

Query: 261 ESVQCVLGVISDL-----GKRHEEQVQAYAIKLLLYNNNS-------------------- 295
            +   VL   S+L     G++    + +   +L L   N+                    
Sbjct: 221 RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQR 280

Query: 296 ----NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
               +VV W+  ++ + +      AIE +  M    V+ +  TF   L A A   +L  G
Sbjct: 281 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 340

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------C 384
           + +H   L +G+   ++ G +L+++Y+  G +                            
Sbjct: 341 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 400

Query: 385 GLRTDQFTLASVLRASSSLPE----------------GLHLSKQIHVHAIKNDTVADSFV 428
           G RT    L   ++ ++ +P                     ++Q H     +  ++D  +
Sbjct: 401 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 460

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           +T+L+++Y R G++  A  +F+     D   W  +I GY        AL L+  M   G 
Sbjct: 461 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 520

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDA 546
              E+T    + AC    + +QGKQ+   +++S + +   ++  S I+D+  + G + DA
Sbjct: 521 EPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDA 579

Query: 547 QSIFNDIPA-PDDVAWTTMI 565
           + + N +P  P+DV W++++
Sbjct: 580 EELINAMPVEPNDVTWSSLL 599



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE  RQIH + I    S++ F+G  +V  Y KCG++  A   F  +  +N   W +ML  
Sbjct: 40  LESVRQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTA 98

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
            AQ+G+    L L++ M    ++P+ V +  VL AC+    + E       +    G++ 
Sbjct: 99  YAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKL 155

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
           +V   + L+    + G  ++A  L   M   + +S + A++ A    G  E    + E  
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWN-AMIAAYAQSGHFEEAIRLYED- 213

Query: 789 MALEP 793
           M +EP
Sbjct: 214 MDVEP 218


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 241/897 (26%), Positives = 404/897 (45%), Gaps = 179/897 (19%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV------------------- 201
            LA  L+ C S G +  +  +HG  + +GL    F+   L+                   
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 202 -------------NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
                        N Y+K G + +A+ LFD M  RDV  W  ++  Y +     +    F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 249 VDLHRSG-LCPDDESVQCVLGVISDLGKRH----------------EEQVQA-------- 283
           V +HRSG   P+  +  CV+     LG R                 +  V+         
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 284 -----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                +A +L        +   N  L+GY ++     AIE F +M     + D V++ + 
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDM----AERDVVSWNMM 241

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           +AA++ +  +     +                  ++ M+ K     G+R D  T  S L 
Sbjct: 242 IAALSQSGRVREALGL------------------VVEMHRK-----GVRLDSTTYTSSLT 278

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A + L   L   KQ+H   I++    D +V++ALI++Y + GS  EA+ +F +    +  
Sbjct: 279 ACARLFS-LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 337

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           +W  +I G +      K++ELF+ M      +D+  +AT +  C   + L  G+Q+H+  
Sbjct: 338 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC---------- 568
           +KSG    + VS+ ++ +Y KCG + +A+ +F+ +   D V+WT+MI+            
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457

Query: 569 ---------------------VDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCL 606
                                + +G E+  L +Y  M     V PD  T+  L +  + +
Sbjct: 458 EFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A + G QI  + +K     +  V  + + MY+KCG I +A  LF  ++ ++ V WNAM+
Sbjct: 518 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
            G +QHG G++  K F+DM + G +PD ++++ VLS CS++GLV E    F +M   +GI
Sbjct: 578 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 637

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P +EH+S +VD LGRAG   EA +LI  MP + +A +  ALL AC++ G+ E  +  A+
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAK 697

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
            +  L+  DS +Y+LL+ I++ A + DD    R  M+ K +KK+P               
Sbjct: 698 HVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK 757

Query: 832 AD--------LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
           AD         I  K++ L+++I   GYV             E  R+  +HSEKLA A+G
Sbjct: 758 ADDVSHPQVIAIRNKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFG 806

Query: 884 LISTP---PSSVI------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           ++S P   P  ++                  ++++E +  +  RFHH + G C C D
Sbjct: 807 IMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGD 863



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 182/721 (25%), Positives = 307/721 (42%), Gaps = 106/721 (14%)

Query: 72  GKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           G  + AR L  + I  P+    N +M  Y++ GSL  A  LFD+MP RD+ SWN++++ Y
Sbjct: 53  GALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGY 112

Query: 130 AHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
                  A    +G   F S+ R   +  +  T   ++K C + G    +  + G   K 
Sbjct: 113 FQ-----ARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKF 167

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFL-------------------------------F 217
               D  V  ALV+++ + G +  A  L                               F
Sbjct: 168 DFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYF 227

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL---- 273
           + M ERDVV W +M+ A +++G   E   L V++HR G+  D  +    L   + L    
Sbjct: 228 EDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLG 287

Query: 274 -GK-------RHEEQVQAYAIKLLL---------------YNN--NSNVVLWNKKLSGYL 308
            GK       R   Q+  Y    L+               +N+  + N V W   + G L
Sbjct: 288 WGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 347

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           Q      ++E F  M    +  D       ++      +L LG+Q+H   LKSG   A++
Sbjct: 348 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIV 407

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           V NSLI++Y+K G    L+  +F  +S+                         +  D   
Sbjct: 408 VSNSLISLYAKCG---DLQNAEFVFSSM-------------------------SERDIVS 439

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            T++I  Y + G++ +A   F+  D  +  TWNAM+  YI        L+++S M +  +
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499

Query: 489 -RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              D +T  T  + C  +   K G Q+  + +K+G  L++ V++  + MY KCG + +AQ
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +   D V+W  MI+G   +G    A   +  M   G  PD  ++  ++   S   
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAM 665
            +++G+     + ++   S      S +VD+  + G++ +A  L  +M M+ T  +W A+
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679

Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVE---PDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
           L     HGN E    L E    H  E   PDS +++ +    S  G   ++ +   LMR+
Sbjct: 680 LSACKIHGNDE----LAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 735

Query: 723 K 723
           K
Sbjct: 736 K 736



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 37/246 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL LG+  H+  L S       ++N+L+++Y++CG L  A  +F  M +RD++SW S++ 
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 128 AYAHSGEGNAENVTEGFRLFRSL--RESITFTSRL------------------------- 160
           AY+  G     N+ +    F  +  R +IT+ + L                         
Sbjct: 446 AYSQIG-----NIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 161 -----TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
                T   L + C   G     + + G+ +K GL+ +  V+ A + +YSK G+I EA+ 
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD +  +DVV W  M+  Y+++G G++    F D+   G  PD  S   VL   S  G 
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620

Query: 276 RHEEQV 281
             E ++
Sbjct: 621 VQEGKL 626



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 27/217 (12%)

Query: 68  DLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           D ++G +  A  ILN S      + N  +TMYS+CG +  A++LFD +  +D++SWN+++
Sbjct: 524 DQIIGHTVKAGLILNVS------VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE------- 179
             Y+  G G      +  + F  +         ++   +L  C  SG V   +       
Sbjct: 578 TGYSQHGMGK-----QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 632

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV-LWKVMLRAYAEN 238
            VHG  +  GL  + F    +V++  + G + EAK L D M  +    +W  +L A   +
Sbjct: 633 RVHG--ISPGL--EHF--SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 686

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           G  +E+  L          PD  S   +  + SD GK
Sbjct: 687 G-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGK 722


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 248/878 (28%), Positives = 381/878 (43%), Gaps = 182/878 (20%)

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           L + C +SG +  ++ +H    K G   ++ +   L++IY   G++  A  LFD +   +
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK---RHEEQV 281
           V  W  ++          +V  LF  +    + PD+ +   VL   S  GK   +  EQ+
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSG-GKAPFQVTEQI 134

Query: 282 QAYAIK-------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDN 313
            A  I              + LY+ N +V               V W   +SG  Q G  
Sbjct: 135 HAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRE 194

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             AI  F  M +S V      F   L+A    +   LG+Q+HG  +K G  S   V N+L
Sbjct: 195 DEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNAL 254

Query: 374 INMYSKMG----------------------CVCGL---------------------RTDQ 390
           + +YS+ G                       + GL                     + D 
Sbjct: 255 VTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
            T+AS+L A +S+  G +  KQ+H + IK    +D  +  +L+D+Y +   +  A   F 
Sbjct: 315 VTVASLLSACASVGAG-YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFL 373

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
             +  ++  WN M+  Y    N  ++  +F  M   G   ++ T  + ++ C  L  L  
Sbjct: 374 TTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDL 433

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G+Q+H   +KSGF+ ++ V S ++DMY K G +  A+ I   +   D V+WT MI+G   
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +     AL ++ +M   G+  D   F+  + A + + AL QG+QIHA       S D  +
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553

Query: 631 GIS-----LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           G +     L+ +Y+KCG+IEDA   F +M  +N V WNAM+ G +QHG G E + LFE+M
Sbjct: 554 GNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEM 613

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
           K  G+ P+ VTF+G +                        IEP+                
Sbjct: 614 KQLGLMPNHVTFVGEMP-----------------------IEPD---------------- 634

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
                           A + R LL AC V  + E G++ A  L+ LEP DS+ YVLLSN+
Sbjct: 635 ----------------AMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNM 678

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGL 842
           +A + +WD     R  MK + VKK+P                       A+ I+  ++ L
Sbjct: 679 YAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDL 738

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS---TPPSSVI------ 893
            +R  E GYV D   +L DVE+E+K+   Y HSEKLA A+GL+S   T P  VI      
Sbjct: 739 NERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVC 798

Query: 894 ------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                       +SN+  +   A RFHH   G+C C D
Sbjct: 799 NDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKD 836



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 219/469 (46%), Gaps = 48/469 (10%)

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-- 381
           IR+NVQ    T+L        + +L   +++H    KSGF    ++G+ LI++Y   G  
Sbjct: 6   IRANVQ----TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEV 61

Query: 382 --------------------CVCGL---------------------RTDQFTLASVLRAS 400
                                + GL                       D+ T ASVLRA 
Sbjct: 62  DNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRAC 121

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           S       +++QIH   I +   +   V   LID+Y +NG +  A+ +FE     D  +W
Sbjct: 122 SGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSW 181

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            AMI G   +    +A+ LF  MH S         ++ + AC  + + K G+Q+H + +K
Sbjct: 182 VAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK 241

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSI 580
            G   +  V + ++ +Y + G ++ A+ IF+ +   D +++ ++ISG    G  D AL +
Sbjct: 242 WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQL 301

Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
           + +M+L  + PD  T A L+ A + + A  +G+Q+H+ +IK+  SSD  +  SL+D+Y K
Sbjct: 302 FEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVK 361

Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
           C +IE A+  F   +  N VLWN MLV   Q GN  E+  +F  M+  G+ P+  T+  +
Sbjct: 362 CFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSI 421

Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           L  C+  G +    E  H    K G +  V   S L+D   + G    A
Sbjct: 422 LRTCTSLGALDLG-EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTA 469



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 2/275 (0%)

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA 542
           M   G R +  T     + C     L   K++HA   KSGF+ +  + S ++D+Y+  G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
           + +A  +F+DIP+ +   W  +ISG +        L ++  M    V PDE TFA +++A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 603 SSCLTA-LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVL 661
            S   A  +   QIHA +I     S P V   L+D+Y+K G+++ A ++F+++ ++++V 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMR 721
           W AM+ GL+Q+G  +E + LF  M    V P    F  VLSAC+   L     E  H   
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-EQLHGFI 239

Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
            K+G+  E    + LV    R G    A ++   M
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  L + S S   FLQ        +   + SILR   S   L LG+  H +++ S    +
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
            ++ + L+ MY++ G L  AR +  ++ + D++SW +++A Y        +   E  +LF
Sbjct: 450 VYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH-----DLFAEALKLF 504

Query: 148 RSLR------ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA--LKIGLVWDEFVSGA 199
           + +       ++I F+S ++    ++       + A   + GY+  L IG   +   S  
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG---NALASNV 561

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           L+ +YSK G I +AK  F  M E++VV W  M+  Y+++G+G E   LF ++ + GL P+
Sbjct: 562 LITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPN 621



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 39/299 (13%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           GK  H+ ++      D  +  +L+ +Y +C  +  A   F      +++ WN +L AY  
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G     N++E + +F  ++      ++ T   +L+ C S G +   E +H   +K G  
Sbjct: 393 LG-----NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQ 447

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
           ++ +V   L+++Y+K G++  A+ +   ++E DVV W  M+  Y ++    E   LF ++
Sbjct: 448 FNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEM 507

Query: 252 HRSGLCPDDESVQCVLGV---ISDLGKRHEEQVQAYA----------------IKLLLYN 292
              G+  D+      +     I  L +  +   Q+Y                 + + LY+
Sbjct: 508 ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYS 567

Query: 293 N---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
                             NVV WN  ++GY Q G    A+  F  M +  +  + VTF+
Sbjct: 568 KCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 626


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 219/740 (29%), Positives = 337/740 (45%), Gaps = 124/740 (16%)

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
           + N  + GY   G    AI  +V M+   V  +  TF   L+          G Q+HG+ 
Sbjct: 98  MLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSV 157

Query: 359 LKSGFYSAVIVGNSLINMYSKMG----------------------CVCG----------- 385
           +K G    V + N LI+ Y++ G                       +CG           
Sbjct: 158 VKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAV 217

Query: 386 ----------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
                     +R    T+  V+ A + L + L + +++  +  +     +  +  AL+D+
Sbjct: 218 SLFFEMVEAGIRPSSVTMVCVISACAKLRD-LDMGERVCAYIGELGLKLNKVMVNALVDM 276

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           Y + G++  A+ LF+     +L  +N ++  Y     + +AL +   M   G R D +T+
Sbjct: 277 YMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTM 336

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGA------------- 542
            +A+ A   L+ L  GK  H Y +++G E    + + I+DMY+KCG              
Sbjct: 337 LSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSN 396

Query: 543 ------------------MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
                             +  A  +FN IP  + V W TMISG V     + A+ ++ +M
Sbjct: 397 KTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREM 456

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           +  G+  D  T   +  A   L A E  + +H  + K     D  +  +LVDM+A+CG+ 
Sbjct: 457 QGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDP 516

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           + A  +F +M  R+   W A +  +A  GNGE    LF  M   GV+PD V F+ VL+AC
Sbjct: 517 QSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTAC 576

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           S+ G V +    F LM E +GI P++EHY  +VD LGRAG  +EA +LI SMP E +  +
Sbjct: 577 SHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVV 635

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
             +LL ACRV  + E   + AE++  L P  +  +VLLSNI+A+A +W DV   R  ++ 
Sbjct: 636 WGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLRE 695

Query: 825 KNVKKDPADLIFAKVEGLIK------------------------RIKEGGYVPDTDFVLL 860
           K V+K P      +V G+I                         R  + G++PD   VLL
Sbjct: 696 KGVRKVPGS-SSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLL 754

Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPS---------------------SVILSNKEP 899
           DV+E+EKE  L  HSEKLA A+GLI+T  S                     + I+ N+E 
Sbjct: 755 DVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREI 814

Query: 900 LYA--NRFHHLRDGMCPCAD 917
           +    NRFH  R G+C C D
Sbjct: 815 IVRDNNRFHFFRQGLCSCCD 834



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 164/613 (26%), Positives = 263/613 (42%), Gaps = 76/613 (12%)

Query: 103 SLVYARRLF-----DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITF 156
           SL YAR+ F     D   D  L   NS++  Y+ +G G      E   L+ R L   +T 
Sbjct: 75  SLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGR-----EAILLYVRMLVLGVT- 128

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
            +  T   +L  C           VHG  +K+GL  D F+   L++ Y++ G +     +
Sbjct: 129 PNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKV 188

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS----- 271
           F+GM ER+VV W  ++  YA     +E   LF ++  +G+ P   ++ CV+   +     
Sbjct: 189 FEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDL 248

Query: 272 DLGKRHEEQVQAYAIKL--LLYNN----------------------NSNVVLWNKKLSGY 307
           D+G+R    +    +KL  ++ N                       + N+VL+N  LS Y
Sbjct: 249 DMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNY 308

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            + G    A+     M++   + D VT L A++A A   +L  G+  HG  +++G     
Sbjct: 309 ARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWD 368

Query: 368 IVGNSLINMYSKMGCVCG---LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
            +GN +I+MY K    CG   +    F L S                        N TV 
Sbjct: 369 SIGNVIIDMYMK----CGKPEMACRVFDLMS------------------------NKTVV 400

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
                 +L   + RNG +  A  +F      +   WN MI G +  +    A+ELF  M 
Sbjct: 401 S---WNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQ 457

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             G + D +T+     ACG L   +  K +H Y  K+G   D+ +++ ++DM+ +CG   
Sbjct: 458 GEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQ 517

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
            A  +FN +   D  AWT  I      G  + A  +++QM + GV PD   F  ++ A S
Sbjct: 518 SAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACS 577

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWN 663
               +EQG  I + +     S        +VD+  + G + +A+ L K M M  N V+W 
Sbjct: 578 HGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWG 637

Query: 664 AMLVGLAQHGNGE 676
           ++L     H N E
Sbjct: 638 SLLAACRVHKNVE 650



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/561 (22%), Positives = 232/561 (41%), Gaps = 69/561 (12%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  ++      D F+ N L+  Y+ CG + +  ++F+ M +R+++SW S++  YA 
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR 209

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
                 +   E   LF  + E+    S +T+  ++  C     +   E V  Y  ++GL 
Sbjct: 210 -----GDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLK 264

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            ++ +  ALV++Y K G I  AK LFD   +R++VL+  +L  YA  G   E   +  ++
Sbjct: 265 LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM 324

Query: 252 HRSGLCPDDESVQCVLGVISDL-----GKRHEEQV------------------------Q 282
            + G  PD  ++   +   + L     GK     V                         
Sbjct: 325 LQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKP 384

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
             A ++    +N  VV WN   +G+++ GD   A E F  +   N  +            
Sbjct: 385 EMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVF------------ 432

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
                      I G   KS F  A       I ++ +M    G++ D+ T+  +  A   
Sbjct: 433 -------WNTMISGLVQKSLFEDA-------IELFREMQGE-GIKADRVTMMGIASACGY 477

Query: 403 L--PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           L  PE   L+K +H +  KN    D  ++TAL+D++ R G    A  +F      D++ W
Sbjct: 478 LGAPE---LAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAW 534

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
            A I    +  N   A  LF+ M   G + D +     + AC     ++QG  + +    
Sbjct: 535 TAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED 594

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G    +     ++D+  + G + +A  +   +P  P+DV W ++++ C     +++ ++
Sbjct: 595 HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAAC--RVHKNVEMA 652

Query: 580 IYHQMRLSGVVPDEFTFAILV 600
            Y   R++ + P      +L+
Sbjct: 653 TYAAERINELAPQRAGVHVLL 673



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 147/324 (45%), Gaps = 8/324 (2%)

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D  T  S L  S    + L+  KQ+H    KN         T L++      S    +Y
Sbjct: 19  ADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDY 78

Query: 448 ------LFENKDGFDLATW--NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAV 499
                 LF+     D A +  N++I GY  +    +A+ L+  M   G   +  T    +
Sbjct: 79  ARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVL 138

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
             C  +    +G Q+H   +K G E D+ + + ++  Y +CG M     +F  +   + V
Sbjct: 139 SGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVV 198

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT++I G         A+S++ +M  +G+ P   T   ++ A + L  L+ G ++ A +
Sbjct: 199 SWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYI 258

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            +L    +  +  +LVDMY KCG I+ A  LF +   RN VL+N +L   A+ G   E L
Sbjct: 259 GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 318

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSA 703
            + ++M   G  PD VT +  +SA
Sbjct: 319 AILDEMLQQGPRPDRVTMLSAISA 342



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 22/173 (12%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           L K  H  I  +    D  L   L+ M++RCG    A ++F+KM +RD+ +W + +   A
Sbjct: 483 LAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMA 542

Query: 131 HSGEGNAENVTEGFR--LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              EGN E  T  F   L + ++  +          +L  C   G V   + +H ++   
Sbjct: 543 M--EGNGEGATGLFNQMLIQGVKPDVVL-----FVQVLTACSHGGQV--EQGLHIFS--- 590

Query: 189 GLVWDEFVS------GALVNIYSKFGKIREAKFLFDGM-QERDVVLWKVMLRA 234
            L+ D  +S      G +V++  + G +REA  L   M  E + V+W  +L A
Sbjct: 591 -LMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 208/674 (30%), Positives = 331/674 (49%), Gaps = 111/674 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
           NVV WN  ++GYL  G++   +  F NM+   N   +   F  AL+A +           
Sbjct: 80  NVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACS----------- 128

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
           HG  +K G                                                 Q H
Sbjct: 129 HGGRVKEGM------------------------------------------------QCH 140

Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG---FDLATWNAMIFGYILSN 471
               K   V   +V +AL+ +Y R   +  A  + +   G    D+ ++N+++   + S 
Sbjct: 141 GLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESG 200

Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +A+E+   M       D +T    +  C  +  L+ G ++HA  ++ G   D  V S
Sbjct: 201 RGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGS 260

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++DMY KCG +++A+++F+ +   + V WT +++  + NG  + +L+++  M   G +P
Sbjct: 261 MLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLP 320

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           +E+TFA+L+ A + + AL  G  +HA + KL   +   V  +L++MY+K G+I+ +Y +F
Sbjct: 321 NEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVF 380

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
             M  R+ + WNAM+ G + HG G++ L++F+DM +    P+ VTFIGVLSA S+ GLV 
Sbjct: 381 TDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVK 440

Query: 712 EAYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
           E +    HLMR  + IEP +EHY+ +V  L RAG   EA   + +   +      R LL 
Sbjct: 441 EGFYYLNHLMR-NFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLN 499

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           AC V  + + G+ +AE ++ ++P D   Y LLSN++A A +WD V + R  M+ +N+KK+
Sbjct: 500 ACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKE 559

Query: 831 PA----DL-------------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
           P     D+                   I+ KV+ L+  IK  GYVP+   VL DVE+E+K
Sbjct: 560 PGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQK 619

Query: 868 ERALYYHSEKLARAYGLISTP---PSSVI------------------LSNKEPLY--ANR 904
           E  L YHSEKLA AYGL+  P   P  +I                  ++N+  +   ANR
Sbjct: 620 EGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANR 679

Query: 905 FHHLRDGMCPCADN 918
           FHH RDG C C D+
Sbjct: 680 FHHFRDGSCTCLDH 693



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 10/363 (2%)

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVS--TALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
           LP G  +  Q     I+N T   S +S   +L+ +Y + G +  A  LF+     ++ +W
Sbjct: 28  LPFGKAMHAQF---LIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSW 84

Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAM 519
           N ++ GY+   N  + L LF +M +      +E    TA+ AC     +K+G Q H    
Sbjct: 85  NVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLF 144

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP---DDVAWTTMISGCVDNGEEDL 576
           K G      V S ++ MY +C  +  A  + + +P     D  ++ ++++  V++G  + 
Sbjct: 145 KFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEE 204

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           A+ +  +M    V  D  T+  ++   + +  L+ G ++HA L++     D FVG  L+D
Sbjct: 205 AVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLID 264

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MY KCG + +A  +F  +  RN V+W A++    Q+G  EE+L LF  M   G  P+  T
Sbjct: 265 MYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYT 324

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           F  +L+AC+    +    +  H   EK G +  V   + L++   ++G    +  +   M
Sbjct: 325 FAVLLNACAGIAALRHG-DLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM 383

Query: 757 PFE 759
            + 
Sbjct: 384 IYR 386



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 158/350 (45%), Gaps = 39/350 (11%)

Query: 69  LLLGKSTHARILNSSQIPDRFLT---NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSI 125
           L  GK+ HA+ L  +Q  +       N+L+ +Y +CG L  AR LFD MP R+++SWN +
Sbjct: 28  LPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVL 87

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           +A Y H G  N   V   F+   SL+ +       T A  L  C   G V      HG  
Sbjct: 88  MAGYLHGG--NHLEVLVLFKNMVSLQNACPNEYVFTTA--LSACSHGGRVKEGMQCHGLL 143

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD---GMQERDVVLWKVMLRAYAENGFGE 242
            K GLV  ++V  ALV++YS+   +  A  + D   G    D+  +  +L A  E+G GE
Sbjct: 144 FKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGE 203

Query: 243 E---VFHLFVD----------LHRSGLCPDDESVQCVLGVISDL---GKRHEEQVQAYAI 286
           E   V    VD          +   GLC     +Q  L V + L   G   +E V +  I
Sbjct: 204 EAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLI 263

Query: 287 KLL-----LYN--------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV 333
            +      + N         N NVV+W   ++ YLQ G    ++  F  M R     +  
Sbjct: 264 DMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEY 323

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
           TF V L A AG   L  G  +H    K GF + VIV N+LINMYSK G +
Sbjct: 324 TFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSI 373



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 48/325 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR---DLISWNSILAA 128
           G   H  +     +  +++ + L+ MYSRC  +  A ++ D +P     D+ S+NS+L A
Sbjct: 136 GMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNA 195

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
              SG G      E   + R + +       +T   ++ LC     +     VH   L+ 
Sbjct: 196 LVESGRGE-----EAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRG 250

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GL++DEFV   L+++Y K G++  A+ +FDG+Q R+VV+W  ++ AY +NG+ EE  +LF
Sbjct: 251 GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLF 310

Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN-------------- 293
             + R G  P++ +   +L   + +   RH + + A   KL   N+              
Sbjct: 311 TCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKS 370

Query: 294 --------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                           +++ WN  + GY   G    A++ F +M+ +    + VTF+  L
Sbjct: 371 GSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVL 430

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFY 364
           +A +           H   +K GFY
Sbjct: 431 SAYS-----------HLGLVKEGFY 444



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 148/318 (46%), Gaps = 22/318 (6%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL LG   HAR+L    + D F+ + L+ MY +CG ++ AR +FD + +R+++ W +++ 
Sbjct: 236 DLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMT 295

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AY  +G        E   LF  +    T  +  T A LL  C     +   + +H    K
Sbjct: 296 AYLQNGY-----FEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEK 350

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
           +G      V  AL+N+YSK G I  +  +F  M  RD++ W  M+  Y+ +G G++   +
Sbjct: 351 LGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQV 410

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHE------EQVQAYAIKLLLYNNNSNVVLWN 301
           F D+  +  CP+  +   VL   S LG   E        ++ + I+  L +    V L +
Sbjct: 411 FQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLS 470

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
           +  +G L   +N         M  + V++D V +   L A     N +LG++I  + L+ 
Sbjct: 471 R--AGLLDEAENF--------MKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQM 520

Query: 362 GFYSAVIVGNSLINMYSK 379
             +  V     L NMY+K
Sbjct: 521 DPHD-VGTYTLLSNMYAK 537



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 192/468 (41%), Gaps = 95/468 (20%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL-HRSGLC 257
           +LV++Y K G++  A+ LFD M  R+VV W V++  Y   G   EV  LF ++      C
Sbjct: 55  SLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNAC 114

Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIK---------------LLLYNNNSNVVL--- 299
           P++      L   S  G R +E +Q + +                + +Y+  S+V L   
Sbjct: 115 PNEYVFTTALSACSH-GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 300 ---------------WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
                          +N  L+  ++ G    A+E    M+   V +D VT++  +   A 
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------------- 388
             +L LG ++H   L+ G      VG+ LI+MY K G V   R                 
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 389 ---------------------------DQFTLASVLRAS---SSLPEGLHLSKQIHVHAI 418
                                      +++T A +L A    ++L  G  L  ++     
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           KN  +    V  ALI++Y ++GS+  +  +F +    D+ TWNAMI GY       +AL+
Sbjct: 354 KNHVI----VRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQ 409

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGI 533
           +F  M ++ E  + +T    + A   L ++K+G       M  + ++ G E   C+ +  
Sbjct: 410 VFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVA-- 467

Query: 534 LDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSI 580
             +  + G + +A++         D VAW T+++ C  +   DL   I
Sbjct: 468 --LLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRI 513



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 7/211 (3%)

Query: 502 CGCLLMLKQGKQMHAYAM---KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
           C  +  L  GK MHA  +   ++     +   + ++ +YVKCG +  A+++F+ +P  + 
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           V+W  +++G +  G     L ++  M  L    P+E+ F   + A S    +++G Q H 
Sbjct: 82  VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM---DMRNTVLWNAMLVGLAQHGN 674
            L K       +V  +LV MY++C ++E A  +   +    + +   +N++L  L + G 
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           GEE +++   M    V  D VT++GV+  C+
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCA 232


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/562 (32%), Positives = 290/562 (51%), Gaps = 51/562 (9%)

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           P GL + KQIH HAI++   +++ V+TA+ ++Y + G +  AE +FE     +   W  +
Sbjct: 124 PSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGI 183

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           + GY  +     AL LF+ M   G  LDE   +  +KAC  L  L  G+Q+H + +K G 
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 243

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           E ++ V + ++D YVKC  +  A   F  I  P+DV+W+ +I+G    GE + AL  +  
Sbjct: 244 ESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFES 303

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           +R   V  + FT+  + +A S L     G Q HA+ IK    +      +++ MY++CG 
Sbjct: 304 LRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGR 363

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           ++ A  +F+ +D  + V W A++ G A  GN  E LKLF  M+  GV P++VTFI VL+A
Sbjct: 364 LDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTA 423

Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
           CS++GLV E  +    M   YG+   ++HY  +VD   RAG  +EA ELI SMPF   A 
Sbjct: 424 CSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAM 483

Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
             + LLG C    + E G+  AE L  L+P D++ Y+L+ N++A+  +W +  + R  M 
Sbjct: 484 SWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMA 543

Query: 824 RKNVKKD-----------------------PADLIFAKVEGLIKRI--KEGGYVPDTDFV 858
            +N++K+                         + I++K+E L   +  +E G + + D  
Sbjct: 544 ERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEED-- 601

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNK 897
            +     E++  L  HSE+LA A+GLISTP S+ +                     ++ +
Sbjct: 602 -VSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGR 660

Query: 898 EPLYAN--RFHHLRDGMCPCAD 917
           E +  +  RFHH + G C C D
Sbjct: 661 EIVVRDSFRFHHFKLGECSCND 682



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 230/532 (43%), Gaps = 97/532 (18%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L  G+  H ++  + + P  FL N+++ MY +CGSL  AR++FD+M +R+L+SWN+I++A
Sbjct: 26  LFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISA 85

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
           YA +G        +GF +F ++ E  T  +  T    L+  L+   +   + +H +A++ 
Sbjct: 86  YAENGV-----FDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRS 140

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
           GL  +  V+ A+ N+Y K G +  A+ +F+ M E++ V W  ++  Y +     +   LF
Sbjct: 141 GLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALF 200

Query: 249 VDLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQA--------- 283
             +   G+  D+     VL                G I  LG   E  V           
Sbjct: 201 AKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKC 260

Query: 284 ----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                A K   + +  N V W+  ++GY Q+G+   A++ F ++   +V  +S T+    
Sbjct: 261 SNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIF 320

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
            A +   + N G Q H   +KS   +     +++I MYS+ G     R D  T     R 
Sbjct: 321 QACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCG-----RLDYAT-----RV 370

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
             S+ +                   D+   TA+I  Y   G                   
Sbjct: 371 FESIDD------------------PDAVAWTAIIAGYAYQG------------------- 393

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
                       N+ +AL+LF  M   G R + +T    + AC    ++ +G+Q +  +M
Sbjct: 394 ------------NAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ-YLESM 440

Query: 520 KSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
            S + +   +     ++D+Y + G + +A  +   +P +PD ++W  ++ GC
Sbjct: 441 SSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGC 492



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV 559
           +ACG +  L  G+  H    ++       + + +L MY KCG++ DA+ +F+++   + V
Sbjct: 18  EACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLV 77

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +W T+IS   +NG  D    ++  M      P+  T+   +++    + LE G+QIH++ 
Sbjct: 78  SWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHA 137

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
           I+    S+  V  ++ +MY KCG +E A ++F++M  +N V W  ++VG  Q     + L
Sbjct: 138 IRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDAL 197

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYSFLVD 738
            LF  M   GVE D   F  VL AC+  GL    +    H    K G+E EV   + LVD
Sbjct: 198 ALFAKMVNEGVELDEYVFSIVLKACA--GLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/363 (20%), Positives = 149/363 (41%), Gaps = 35/363 (9%)

Query: 49  SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
           +  + S +   LR  ++ S L +GK  H+  + S    +  +   +  MY +CG L  A 
Sbjct: 107 TKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAE 166

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
            +F+KM +++ ++W  I+  Y       AE   +   LF  +            + +LK 
Sbjct: 167 LVFEKMSEKNAVAWTGIMVGYTQ-----AERQMDALALFAKMVNEGVELDEYVFSIVLKA 221

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C     +     +HG+ +K+GL  +  V   LV+ Y K   +  A   F+ + E + V W
Sbjct: 222 CAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSW 281

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL------GKRHEEQVQ 282
             ++  Y + G  EE    F  L    +  +  +   +    S L       + H + ++
Sbjct: 282 SALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIK 341

Query: 283 A-----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
           +                       YA ++    ++ + V W   ++GY   G+   A++ 
Sbjct: 342 SSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKL 401

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ-IHGTTLKSGFYSAVIVGNSLINMYS 378
           F  M    V+ ++VTF+  L A + +  +  G+Q +   +   G  + +   + ++++YS
Sbjct: 402 FRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYS 461

Query: 379 KMG 381
           + G
Sbjct: 462 RAG 464



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 19/213 (8%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y  +  F  +L  F      S   +S  + SI +   + +D   G   HA  + SS +  
Sbjct: 288 YCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAY 347

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
           +   + ++TMYSRCG L YA R+F+ + D D ++W +I+A YA+ G     N  E  +LF
Sbjct: 348 QHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQG-----NAPEALKLF 402

Query: 148 RSLRESITFTSRLTLAPLLKLCLSSG-------YVWASETVHGYALKIGLVWDEFVSGAL 200
           R +++     + +T   +L  C  SG       Y+ +  + +G A  I    D +    +
Sbjct: 403 RRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTI----DHY--DCM 456

Query: 201 VNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML 232
           V+IYS+ G ++EA  L   M    D + WK +L
Sbjct: 457 VDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%)

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
           M  +G+     ++  L +A   + +L  GR  H  + +   +   F+  S++ MY KCG+
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           + DA  +F +M  RN V WN ++   A++G  ++   +F +M     +P+  T+IG L +
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 207/642 (32%), Positives = 313/642 (48%), Gaps = 114/642 (17%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           M+R++V     +F + L + A +    LG+  H   +K GF   +I+   L++ Y+K+G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVG- 59

Query: 383 VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
                                   L  +K++ +   + D VA++    A+I    ++G +
Sbjct: 60  -----------------------DLKCAKRVFMGMPRRDVVANN----AMISALSKHGYV 92

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            EA  LF+N    +  +WN+MI  Y    + + A  +F                  VK  
Sbjct: 93  EEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFD--------------CNPVK-- 136

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI-PAPDDVAW 561
                                  D+   + I+D Y K   +V AQ +F  +  A + V W
Sbjct: 137 -----------------------DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTW 173

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            TMIS  V  GE   A+S++ QM+   V P E T   L+ A + L AL+ G  IH  +  
Sbjct: 174 NTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRT 233

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
                D  +G +L+DMY KCG +E A  +F  +  +N   WN+++VGL  +G GEE +  
Sbjct: 234 KRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAA 293

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F  M+  G++PD VTF+G+LS CS++GL+S     F  M   YG+EP VEHY  +VD LG
Sbjct: 294 FIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLG 353

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG  KEA ELI +MP + ++ +  +LL AC++  DT+ G+ V ++L+ L+P D   YV 
Sbjct: 354 RAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVF 413

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAK 838
           LSN++A+ ++WDDV + R  M ++ V K P                          I A 
Sbjct: 414 LSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAF 473

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE 898
           ++ + K +K  G+VP+T  VL D+EEEEKE A+ YHSE++A A+GL+STPP   I   K 
Sbjct: 474 LDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKN 533

Query: 899 -----------PLYAN------------RFHHLRDGMCPCAD 917
                       L +N            RFHH R+G C C D
Sbjct: 534 LRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCND 575



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/458 (22%), Positives = 181/458 (39%), Gaps = 91/458 (19%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              S+ + + +L+ C  SG     E  H   +K+G  +D  +   L++ Y+K G ++ AK
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV--LGVISD 272
            +F GM  RDVV    M+ A +++G+ EE  +LF ++     C  +  + C   LG I+ 
Sbjct: 66  RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINS 125

Query: 273 L--------------------GKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                                G    +Q+ A     LL  +  N V WN  +S Y+Q G+
Sbjct: 126 ARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGE 185

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
              AI  F  M   NV+   VT +  L+A A    L++G+ IHG          V++GN+
Sbjct: 186 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 245

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           LI+MY K G +                                     +   D F   + 
Sbjct: 246 LIDMYCKCGAL-------------------------------------EAAIDVFHGLSR 268

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
            +++C                      WN++I G  ++    +A+  F  M   G + D 
Sbjct: 269 KNIFC----------------------WNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDG 306

Query: 493 ITIATAVKACGCLLMLKQGKQ-----MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           +T    +  C    +L  G++     +  Y ++ G E   C    ++D+  + G + +A 
Sbjct: 307 VTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGC----MVDLLGRAGYLKEAL 362

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
            +   +P  P+ +   +++  C  + +  L   +  Q+
Sbjct: 363 ELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQL 400



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 31/197 (15%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N+++T Y + G +  AR +FD  P +D++SWN+I+  Y  S +  A    E F L  S R
Sbjct: 111 NSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVA--AQELFLLMGSAR 168

Query: 152 ESITFTS-----------------------------RLTLAPLLKLCLSSGYVWASETVH 182
            S+T+ +                              +T+  LL  C   G +   E +H
Sbjct: 169 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIH 228

Query: 183 GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGE 242
           GY     L  D  +  AL+++Y K G +  A  +F G+  +++  W  ++     NG GE
Sbjct: 229 GYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGE 288

Query: 243 EVFHLFVDLHRSGLCPD 259
           E    F+ + + G+ PD
Sbjct: 289 EAIAAFIVMEKEGIKPD 305



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 178/446 (39%), Gaps = 65/446 (14%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S + +  ILR    + +  LG++ H +I+      D  L   L+  Y++ G L  A+R+F
Sbjct: 9   SKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVF 68

Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLC 169
             MP RD+++ N++++A +  G      V E   LF ++  R S ++ S +T    L   
Sbjct: 69  MGMPRRDVVANNAMISALSKHGY-----VEEARNLFDNMTERNSCSWNSMITCYCKLGDI 123

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLW 228
            S+  ++    V     K  + W+  + G     Y K  ++  A+ LF  M   R+ V W
Sbjct: 124 NSARLMFDCNPV-----KDVVSWNAIIDG-----YCKSKQLVAAQELFLLMGSARNSVTW 173

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAY--- 284
             M+ AY + G       +F  +    + P + ++  +L   + LG     E +  Y   
Sbjct: 174 NTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRT 233

Query: 285 ---AIKLLLYN----------------------NNSNVVLWNKKLSGYLQVGDNHGAIEC 319
               I ++L N                      +  N+  WN  + G    G    AI  
Sbjct: 234 KRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAA 293

Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
           F+ M +  ++ D VTF+  L+  + +  L+ GQ+         ++S ++    L      
Sbjct: 294 FIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR---------YFSEMLGVYGLEPGVEH 344

Query: 380 MGCVCGLRTDQFTLASVL---RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV- 435
            GC+  L      L   L   RA    P  + L   +    I  DT     V+  L+++ 
Sbjct: 345 YGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELD 404

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWN 461
            C  G+     Y+F +     L+ W+
Sbjct: 405 PCDGGN-----YVFLSNLYASLSRWD 425



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 18/233 (7%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y     F  ++  F Q    +   +     S+L        L +G+  H  I       D
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             L N L+ MY +CG+L  A  +F  +  +++  WNSI+     +G G      E    F
Sbjct: 240 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGE-----EAIAAF 294

Query: 148 RSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
             + +       +T   +L  C     LS+G  + SE +  Y L+ G+  + +  G +V+
Sbjct: 295 IVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGV--EHY--GCMVD 350

Query: 203 IYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA---YAENGFGEEVFHLFVDL 251
           +  + G ++EA  L   M  + + ++   +LRA   + +   GE+V    ++L
Sbjct: 351 LLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLEL 403


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 300/580 (51%), Gaps = 53/580 (9%)

Query: 387 RTDQFTLASVLRASSS---LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           R ++F    V ++ SS   + EG    KQ H   +K+  ++  FV   L+ +Y       
Sbjct: 133 RPNEFVATVVFKSCSSSGRIEEG----KQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNG 188

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG 503
           EA  + ++    DL+ +++ + GY+      +  E+   M      LD IT  + ++ C 
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCS 248

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L  L   +Q+H+  ++ GF  ++  S  I++MY KCG ++ AQ +F++  A + V  TT
Sbjct: 249 NLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTT 308

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           ++     +   + AL+++ +M    V P+E+TFAI + + + L+ L+ G  +H  ++K  
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSG 368

Query: 624 CSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFE 683
             +   VG +LV+MYAK G+IEDA   F  M  R+ V WN M+ G + HG G E L+ F+
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFD 428

Query: 684 DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
            M   G  P+ +TFIGVL ACS+ G V +    F+ + +K+ ++P+++HY+ +V  L +A
Sbjct: 429 RMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKA 488

Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
           G  K+A + + + P E      RALL AC V+ +   GK VAE  +   P DS  YVLLS
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLS 548

Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVE 840
           NI A + +W+ V   R  M ++ VKK+P                         LI+AK++
Sbjct: 549 NIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIK 608

Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPL 900
            ++ +I+  GY PD   V  DV+EE++E  L YHSEKLA AYGL+ TP +S +   K   
Sbjct: 609 EVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVR 668

Query: 901 Y-----------------------ANRFHHLRDGMCPCAD 917
                                   +NRFHH RDG C C D
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCD 708



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 207/484 (42%), Gaps = 77/484 (15%)

Query: 162 LAPLLKLCLSSGYVWASETVHGYAL---KIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           L  LLK+C +S Y+   E++HG+ +   +     D +   +L+N+Y K G+   A+ +FD
Sbjct: 34  LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
            M ER+VV W  M++ Y  +GF  EV  LF  +  S     +E V  V+        R E
Sbjct: 94  LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153

Query: 279 EQVQAY------------------------------AIKLLLYNNNSNVVLWNKKLSGYL 308
           E  Q +                              AI++L      ++ +++  LSGYL
Sbjct: 154 EGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
           + G      E    M + ++  D++T+L  L   +   +LNL +QIH   ++ GF S V 
Sbjct: 214 ECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVE 273

Query: 369 VGNSLINMYSKMGCVC-GLRTDQFTLAS--VLRAS--------SSLPEGLHL-----SKQ 412
              ++INMY K G V    R    T A   VL  +         S  E L+L     +K+
Sbjct: 274 ASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333

Query: 413 I----HVHAIKNDTVAD----------------------SFVSTALIDVYCRNGSMAEAE 446
           +    +  AI  +++A+                        V  AL+++Y ++GS+ +A 
Sbjct: 334 VPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
             F      D+ TWN MI G+       + LE F  M  +GE  + IT    ++AC  + 
Sbjct: 394 KAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVG 453

Query: 507 MLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTM 564
            ++QG       MK    + DL   + I+ +  K G   DA+      P   D VAW  +
Sbjct: 454 FVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRAL 513

Query: 565 ISGC 568
           ++ C
Sbjct: 514 LNAC 517



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 166/358 (46%), Gaps = 38/358 (10%)

Query: 59  ILRHAISTSDLLLGKSTHARIL---NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           +L+   ++S L  G+S H  ++    SS+  D +  N+L+ +Y +CG  V AR++FD MP
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGY 174
           +R+++SW +++  Y +SG        E  +LF+S+  S  +  +      + K C SSG 
Sbjct: 97  ERNVVSWCAMMKGYQNSGFD-----FEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGR 151

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   +  HG  LK GL+  EFV   LV +YS      EA  + D +   D+ ++   L  
Sbjct: 152 IEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL------GKRHEEQVQ------ 282
           Y E G  +E   +   + +  L  D+ +    L + S+L       + H   V+      
Sbjct: 212 YLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSE 271

Query: 283 -----------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                             YA ++    +  N+VL    +  Y Q      A+  F  M  
Sbjct: 272 VEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDT 331

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             V  +  TF ++L ++A    L  G  +HG  LKSG+ + V+VGN+L+NMY+K G +
Sbjct: 332 KEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSI 389



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 5/368 (1%)

Query: 407 LHLSKQIHVHAI---KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           L   + IH H I   ++    D +   +LI++Y + G    A  +F+     ++ +W AM
Sbjct: 47  LRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAM 106

Query: 464 IFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           + GY  S    + L+LF  M  S E R +E       K+C     +++GKQ H   +KSG
Sbjct: 107 MKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSG 166

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
                 V + ++ MY  C    +A  + +D+P  D   +++ +SG ++ G       +  
Sbjct: 167 LMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLR 226

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           +M    +V D  T+   ++  S L  L   RQIH+ +++L  +S+     ++++MY KCG
Sbjct: 227 RMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCG 286

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            +  A  +F     +N VL   ++    Q  + EE L LF  M    V P+  TF   L+
Sbjct: 287 KVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLN 346

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
           + +   L+    +  H +  K G    V   + LV+   ++G  ++A +    M F    
Sbjct: 347 SIAELSLLKHG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405

Query: 763 SMHRALLG 770
           + +  + G
Sbjct: 406 TWNTMICG 413



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 9/299 (3%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S LR   +  DL L +  H+R++      +   +  ++ MY +CG ++YA+R+FD   
Sbjct: 240 YLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTH 299

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            ++++   +I+ AY        ++  E   LF  +       +  T A  L        +
Sbjct: 300 AQNIVLNTTIMDAYFQD-----KSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLL 354

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +HG  LK G      V  ALVN+Y+K G I +A+  F GM  RD+V W  M+  +
Sbjct: 355 KHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGF 414

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
           + +G G E    F  +  +G  P+  +   VL   S +G    EQ   Y  +L+   N  
Sbjct: 415 SHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVG--FVEQGLYYFNQLMKKFNVQ 472

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
             +     + G L         E F  M  + +++D V +   L A     N  LG+++
Sbjct: 473 PDLQHYTCIVGLLSKAGMFKDAEDF--MRTAPIEWDVVAWRALLNACYVRRNFRLGKKV 529


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 231/793 (29%), Positives = 376/793 (47%), Gaps = 43/793 (5%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           L K    S+S    + ++LR   +   L  G+  HA I++     +  L   +  MY+RC
Sbjct: 39  LDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARC 98

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
                A  LFD MPDR    WN ++  +       A+   +   L+R +    T  S   
Sbjct: 99  RCFDTAIALFDAMPDRRPFCWNVLMKEFL-----AADRPRDTLELYRRMSVENTQPSACG 153

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
               +  C     +    ++H Y +  G   +  +  ALV +Y++ G+I  A   FD  +
Sbjct: 154 FMWAIVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNR 212

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
           E     W  ++ A A  G       LF  + +   C D      +    +    R   Q+
Sbjct: 213 ELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQ-CSDRSCAIALGACAAAGHLRGGIQI 271

Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                K+    + + V++ N  +S Y++ G    A+  F +M   NV    V++   +AA
Sbjct: 272 HD---KIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNV----VSWTSMIAA 324

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
           VA T                G YS  +       ++  M    G+  ++ T ASV+ A +
Sbjct: 325 VAQT----------------GHYSFSV------KLFDGM-IAEGINPNEKTYASVVSAIA 361

Query: 402 SLPEG--LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN--KDGFDL 457
            L     L   ++IH     +   AD  V  +LI++Y R+G +AEA  +F++  ++   +
Sbjct: 362 HLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTV 421

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAY 517
            ++  MI  Y  + +  +ALE+F  M   G   +EIT AT + AC  +  L  G  +H  
Sbjct: 422 VSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHER 481

Query: 518 AMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDL 576
            ++SG +  D    + ++DMY KCG +  A  +F  +   D VAWTT+I+  V +G    
Sbjct: 482 MIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRA 541

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVD 636
           AL +Y +M  SG+ PD  T + L+ A + L  L  G +IH   ++     D     +L  
Sbjct: 542 ALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAA 601

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MYAKCG++E A  L+++    +   W +ML   +Q G     L+L+ +M++ GV P+ VT
Sbjct: 602 MYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVT 661

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           FI VL +CS  GLV+E  E FH +   YG +P  EH+  +VD LGRAG+ ++A EL+ SM
Sbjct: 662 FIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSM 721

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVT 816
           PF       ++LL +C++  D E G   AE L+ L+P  +S +V LS I+AAA +  D+ 
Sbjct: 722 PFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDID 781

Query: 817 SARGEMK-RKNVK 828
             + E+  R+ ++
Sbjct: 782 EIKRELALRRQIE 794


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 192/593 (32%), Positives = 302/593 (50%), Gaps = 69/593 (11%)

Query: 392 TLASVLRASSSLPEGL-HLSKQIHVHAIKNDTVADSFVSTALIDVYCR------------ 438
           +L + L++ + L  GL  L+  +H  AI++ + AD F + AL+++  +            
Sbjct: 51  SLPAALKSCAGL--GLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNG 108

Query: 439 ---NGSMAEAEY-----LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
               G +  A Y     +F+     D  +WN +I G        +AL +   M   G   
Sbjct: 109 PSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP 168

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           D  T++T +        +K+G  +H YA+K+GF+ D+ V S ++DMY  C  M  +  +F
Sbjct: 169 DTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVF 228

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           +     D V W +M++G   NG  + AL I+ +M  +GV P   TF+ L+ A   L+ L 
Sbjct: 229 DSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLR 288

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
            G+Q+HA LI+   + + F+  SL+DMY KCGN++ A  +F  +   + V W AM++G A
Sbjct: 289 LGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA 348

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
            HG   E   LFE M+   V+P+ +TF+ VL+ACS+ GLV   ++ F+ M  +YG  P +
Sbjct: 349 LHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSL 408

Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
           EH + L D LGRAG   EA   I  M  + ++S+   LL ACRV  +T   + VA+K+  
Sbjct: 409 EHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE 468

Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------ 832
           LEP    ++V+LSN+++A+ +W++    R  M+ K +KK+PA                  
Sbjct: 469 LEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDK 528

Query: 833 -----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST 887
                D I   +    +++   GYVP+ + VL D+EEE+K   L  HSEKLA  +G+IST
Sbjct: 529 SHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIIST 588

Query: 888 PPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           PP + I                     +  +E +    NRFH  +DG C C D
Sbjct: 589 PPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGD 641



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 22/250 (8%)

Query: 476 ALELFSHMHTSGERLDEI--TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
           A+ LF  M  S      +  ++  A+K+C  L +      +HA A++SG   D   ++ +
Sbjct: 31  AISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANAL 90

Query: 534 LDMYVK--------------------CGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           L++ +K                      A    + +F+++   D V+W T+I GC ++  
Sbjct: 91  LNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKR 150

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              ALS+  +M   G +PD FT + ++   +    +++G  +H   IK    +D FVG S
Sbjct: 151 HQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSS 210

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           L+DMYA C  ++ +  +F      + VLWN+ML G AQ+G+ EE L +F  M   GV P 
Sbjct: 211 LIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPV 270

Query: 694 SVTFIGVLSA 703
            VTF  ++ A
Sbjct: 271 PVTFSSLIPA 280



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 46/318 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           + V WN  + G  +   +  A+     M R     D+ T    L   A   ++  G  +H
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193

Query: 356 GTTLKSGFYSAVIVGNSLINMYS-------------------------------KMGCV- 383
           G  +K+GF + V VG+SLI+MY+                               + G V 
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253

Query: 384 -----------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
                       G+R    T +S++ A  +L   L L KQ+H + I+     + F+S++L
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNL-SLLRLGKQLHAYLIRARFNDNIFISSSL 312

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           ID+YC+ G++  A  +F      D+ +W AMI GY L   + +A  LF  M     + + 
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372

Query: 493 ITIATAVKACGCLLMLKQG-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
           IT    + AC    ++  G K  ++ + + GF   L   + + D   + G + +A +  +
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 432

Query: 552 DIP-APDDVAWTTMISGC 568
           ++   P    W+T++  C
Sbjct: 433 EMKIKPTSSVWSTLLRAC 450



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 157/383 (40%), Gaps = 80/383 (20%)

Query: 146 LFRSLRESITFTSRL--TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNI 203
           LF  +R S+   S +  +L   LK C   G    + ++H  A++ G   D F + AL+N+
Sbjct: 34  LFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNL 93

Query: 204 YSKF---------------GKIREAKF-----LFDGMQERDVVLWKVMLRAYAENGFGEE 243
             K                G +  A +     +FD M ERD V W  ++   AE+   +E
Sbjct: 94  CIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQE 153

Query: 244 VFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK-------------LL 289
              +  ++ R G  PD  ++  VL + ++    +    V  YAIK             + 
Sbjct: 154 ALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLID 213

Query: 290 LYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
           +Y N               + + VLWN  L+GY Q G    A+  F  M+++ V+   VT
Sbjct: 214 MYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVT 273

Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
           F   + A      L LG+Q+H   +++ F   + + +SLI+MY    C CG         
Sbjct: 274 FSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMY----CKCG--------- 320

Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
                       + +++++       D V+     TA+I  Y  +G   EA  LFE  + 
Sbjct: 321 -----------NVDIARRVFNGIQSPDIVS----WTAMIMGYALHGPTTEAFVLFERMEL 365

Query: 455 FDLATWNAMIFGYILSNNSHKAL 477
            ++   N + F  +L+  SH  L
Sbjct: 366 GNVKP-NHITFLAVLTACSHAGL 387



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 5/208 (2%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           +D+  G   H   + +    D F+ ++L+ MY+ C  + Y+ ++FD   D D + WNS+L
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSML 243

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           A YA +G     +V E   +FR + ++      +T + L+    +   +   + +H Y +
Sbjct: 244 AGYAQNG-----SVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLI 298

Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
           +     + F+S +L+++Y K G +  A+ +F+G+Q  D+V W  M+  YA +G   E F 
Sbjct: 299 RARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFV 358

Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLG 274
           LF  +    + P+  +   VL   S  G
Sbjct: 359 LFERMELGNVKPNHITFLAVLTACSHAG 386



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 131/322 (40%), Gaps = 54/322 (16%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRC---------------GSLVYA-----RRL 110
           L  S HA  + S    DRF  N L+ +  +                G L  A     R++
Sbjct: 67  LAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKV 126

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           FD+M +RD +SWN+++      G    +   E   + R +          TL+ +L +  
Sbjct: 127 FDEMLERDAVSWNTLIL-----GCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFA 181

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
               +     VHGYA+K G   D FV  +L+++Y+   ++  +  +FD   + D VLW  
Sbjct: 182 ECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNS 241

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLL 289
           ML  YA+NG  EE   +F  + ++G+ P   +   ++    +L   R  +Q+ AY I+  
Sbjct: 242 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 301

Query: 290 LYNN----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFV 321
             +N                            + ++V W   + GY   G    A   F 
Sbjct: 302 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 361

Query: 322 NMIRSNVQYDSVTFLVALAAVA 343
            M   NV+ + +TFL  L A +
Sbjct: 362 RMELGNVKPNHITFLAVLTACS 383


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 241/897 (26%), Positives = 404/897 (45%), Gaps = 179/897 (19%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV------------------- 201
            LA  L+ C S G +  +  +HG  + +GL    F+   L+                   
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 202 -------------NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
                        N Y+K G + +A+ LFD M  RDV  W  ++  Y +     +    F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 249 VDLHRSG-LCPDDESVQCVLGVISDLGKRH----------------EEQVQA-------- 283
           V +HRSG   P+  +  CV+     LG R                 +  V+         
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 284 -----YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                +A +L        +   N  L+GY ++     AIE F +M     + D V++ + 
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDM----AERDVVSWNMM 241

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
           +AA++ +  +     +                  ++ M+ K     G+R D  T  S L 
Sbjct: 242 IAALSQSGRVREALGL------------------VVEMHRK-----GVRLDSTTYTSSLT 278

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
           A + L   L   KQ+H   I++    D +V++ALI++Y + GS  EA+ +F +    +  
Sbjct: 279 ACARLFS-LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 337

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           +W  +I G +      K++ELF+ M      +D+  +AT +  C   + L  G+Q+H+  
Sbjct: 338 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397

Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGC---------- 568
           +KSG    + VS+ ++ +Y KCG + +A+ +F+ +   D V+WT+MI+            
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457

Query: 569 ---------------------VDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCL 606
                                + +G E+  L +Y  M     V PD  T+  L +  + +
Sbjct: 458 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A + G QI  + +K     +  V  + + MY+KCG I +A  LF  ++ ++ V WNAM+
Sbjct: 518 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
            G +QHG G++  K F+DM + G +PD ++++ VLS CS++GLV E    F +M   +GI
Sbjct: 578 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 637

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P +EH+S +VD LGRAG   EA +LI  MP + +A +  ALL AC++ G+ E  +  A+
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAK 697

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
            +  L+  DS +Y+LL+ I++ A + DD    R  M+ K +KK+P               
Sbjct: 698 HVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK 757

Query: 832 AD--------LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
           AD         I  K++ L+++I   GYV             E  R+  +HSEKLA A+G
Sbjct: 758 ADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFG 806

Query: 884 LISTP---PSSVI------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
           ++S P   P  ++                  ++++E +  +  RFHH + G C C D
Sbjct: 807 IMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGD 863



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 182/724 (25%), Positives = 307/724 (42%), Gaps = 106/724 (14%)

Query: 69  LLLGKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           L  G  + AR L  + I  P+    N +M  Y++ GSL  A  LFD+MP RD+ SWN+++
Sbjct: 50  LSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLM 109

Query: 127 AAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
           + Y       A    +G   F S+ R   +  +  T   ++K C + G    +  + G  
Sbjct: 110 SGYFQ-----ARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLF 164

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFL----------------------------- 216
            K     D  V  ALV+++ + G +  A  L                             
Sbjct: 165 WKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAI 224

Query: 217 --FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL- 273
             F+ M ERDVV W +M+ A +++G   E   L V++HR G+  D  +    L   + L 
Sbjct: 225 EYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLF 284

Query: 274 ----GK-------RHEEQVQAYAIKLLL---------------YNN--NSNVVLWNKKLS 305
               GK       R   Q+  Y    L+               +N+  + N V W   + 
Sbjct: 285 SLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIG 344

Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
           G LQ      ++E F  M    +  D       ++      +L LG+Q+H   LKSG   
Sbjct: 345 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNR 404

Query: 366 AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVAD 425
           A++V NSLI++Y+K G    L+  +F  +S+                         +  D
Sbjct: 405 AIVVSNSLISLYAKCG---DLQNAEFVFSSM-------------------------SERD 436

Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
               T++I  Y + G++ +A   F+     +  TWNAM+  YI        L+++S M +
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 486 SGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
             +   D +T  T  + C  +   K G Q+  + +K+G  L++ V++  + MY KCG + 
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 556

Query: 545 DAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
           +AQ +F+ +   D V+W  MI+G   +G    A   +  M   G  PD  ++  ++   S
Sbjct: 557 EAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS 616

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMRNTV-LW 662
               +++G+     + ++   S      S +VD+  + G++ +A  L  +M M+ T  +W
Sbjct: 617 HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 676

Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVE---PDSVTFIGVLSACSYTGLVSEAYENFHL 719
            A+L     HGN E    L E    H  E   PDS +++ +    S  G   ++ +   L
Sbjct: 677 GALLSACKIHGNDE----LAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732

Query: 720 MREK 723
           MR+K
Sbjct: 733 MRDK 736



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 37/246 (15%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL LG+  H+  L S       ++N+L+++Y++CG L  A  +F  M +RD++SW S++ 
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 128 AYAHSGEGNAENVTEGFRLFRSL--RESITFTSRL------------------------- 160
           AY+  G     N+ +    F  +  R +IT+ + L                         
Sbjct: 446 AYSQIG-----NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 161 -----TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
                T   L + C   G     + + G+ +K GL+ +  V+ A + +YSK G+I EA+ 
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           LFD +  +DVV W  M+  Y+++G G++    F D+   G  PD  S   VL   S  G 
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620

Query: 276 RHEEQV 281
             E ++
Sbjct: 621 VQEGKL 626



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 27/217 (12%)

Query: 68  DLLLGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           D ++G +  A  ILN S      + N  +TMYS+CG +  A++LFD +  +D++SWN+++
Sbjct: 524 DQIIGHTVKAGLILNVS------VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE------- 179
             Y+  G G      +  + F  +         ++   +L  C  SG V   +       
Sbjct: 578 TGYSQHGMGK-----QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 632

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV-LWKVMLRAYAEN 238
            VHG  +  GL  + F    +V++  + G + EAK L D M  +    +W  +L A   +
Sbjct: 633 RVHG--ISPGL--EHF--SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 686

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           G  +E+  L          PD  S   +  + SD GK
Sbjct: 687 G-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGK 722


>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
          Length = 628

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 178/527 (33%), Positives = 289/527 (54%), Gaps = 28/527 (5%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G  TD+FT   ++ A + L + L  ++++     + + ++ +     L   Y +NG +  
Sbjct: 71  GAATDRFTANHLMLAYADLGD-LTAARELFERIPRRNVMSWNI----LFGGYIKNGDLGG 125

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ATWNAM+ G        ++L  F  M   G   DE  + +  + C  
Sbjct: 126 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAG 185

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + + +++   +P+   V+  T+
Sbjct: 186 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 245

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G   NG+ + AL  +  MR  GV  D  TF   + + S L AL QG+QIH  ++K   
Sbjct: 246 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 305

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
                V   LV MY++CG + D+  +F      +T L +AM+     HG+G++ ++LF+ 
Sbjct: 306 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 365

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G EP  VTF+ +L ACS++GL  E  + F LM + YG++P V+HY+ +VD LGR+G
Sbjct: 366 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 425

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA  LILSMP      + + LL AC+ Q + +  + +A++++ L+P DS++YVLLSN
Sbjct: 426 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSN 485

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I A + +W DV+  R  M+  NV+K+P                          I   +E 
Sbjct: 486 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 545

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
           ++ +I++ GY PD   VL D+E+EEKE +L +HSEKLA A+  +S P
Sbjct: 546 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLP 592



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 32/268 (11%)

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGIL----DM--------------------------- 536
           L+  +Q+HA+A  SG   D   ++ ++    D+                           
Sbjct: 57  LRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG 116

Query: 537 YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTF 596
           Y+K G +  A+ +F+++P  +   W  M++G  + G ++ +L  +  MR  G+ PDEF  
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 176

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
             + +  + L  +  GRQ+HA +++     D  VG SL  MY +CG +++   + + +  
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
            + V  N ++ G  Q+G+ E  L+ F  M++ GV  D VTF+  +S+CS    +++  + 
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQG-QQ 295

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAG 744
            H    K G++  V   + LV    R G
Sbjct: 296 IHGQVMKAGVDKVVPVMTCLVHMYSRCG 323



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 143/361 (39%), Gaps = 77/361 (21%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV---------------QYDSVTFLV--- 337
           NV+ WN    GY++ GD  GA + F  M   NV                 +S+ F +   
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 165

Query: 338 ---------ALAAV----AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
                     L +V    AG  ++  G+Q+H   ++SG    + VG+SL +MY + GC+ 
Sbjct: 166 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 225

Query: 384 -------------------------------------CGLRT-----DQFTLASVLRASS 401
                                                C +R+     D  T  S + + S
Sbjct: 226 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   +QIH   +K        V T L+ +Y R G + ++E +F    G D    +
Sbjct: 286 DLA-ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI  Y    +  KA+ELF  M   G    ++T    + AC    + ++G        K+
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404

Query: 522 -GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALS 579
            G +  +   + ++D+  + G + +A+++   +P  PD V W T++S C      D+A  
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 464

Query: 580 I 580
           I
Sbjct: 465 I 465



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 142/395 (35%), Gaps = 70/395 (17%)

Query: 51  SSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S +++ FS L  A      L  +  HA    S    DRF  N+LM  Y+  G L  AR L
Sbjct: 41  SDAARLFSHLFRACRALRPL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 98

Query: 111 FDKMPDRDLISWNSILAAYAHSGE-GNAENV-------------------------TEGF 144
           F+++P R+++SWN +   Y  +G+ G A  +                          E  
Sbjct: 99  FERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESL 158

Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
             F  +R          L  + + C     V     VH Y ++ GL  D  V  +L ++Y
Sbjct: 159 GFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 218

Query: 205 SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ 264
            + G ++E + +   +    +V    ++    +NG  E     F  +   G+  D  +  
Sbjct: 219 MRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFV 278

Query: 265 CVLGVISDL-----GKRHEEQVQAYAI------------------------KLLLYNNNS 295
             +   SDL     G++   QV    +                        ++      S
Sbjct: 279 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 338

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNL 348
           +  L +  +S Y   G    AIE F  M+    +   VTFL  L A +       G D  
Sbjct: 339 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
            L  + +G       Y+ V      +++  + GC+
Sbjct: 399 ELMTKTYGMQPSVKHYTCV------VDLLGRSGCL 427



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L     +   +P  
Sbjct: 178 SVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 237

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
            ++S N+I+A    +G  ++E   E F + RS+    + +TF S ++       C     
Sbjct: 238 SIVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISS------CSDLAA 289

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +HG  +K G+     V   LV++YS+ G + +++ +F G    D  L   M+ A
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +   G  P D +   +L   S  G + EE +  + +    Y   
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLK-EEGMDCFELMTKTYGMQ 408

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G ++    +I S  +  D V +   L+A     N ++ ++
Sbjct: 409 PSV----KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 464

Query: 354 I 354
           I
Sbjct: 465 I 465



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 82/215 (38%), Gaps = 36/215 (16%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ L +A   L  L   RQ+HA       ++D F    L+  YA  G++  A  LF+++ 
Sbjct: 47  FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103

Query: 656 MRNTV-------------------------------LWNAMLVGLAQHGNGEETLKLFED 684
            RN +                                WNAM+ GL   G  EE+L  F D
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G+ PD      V   C+    V    +  H    + G++ ++   S L     R G
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ-VHAYVVRSGLDRDMCVGSSLAHMYMRCG 222

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTE 779
             +E GE +L M    S      ++      GD+E
Sbjct: 223 CLQE-GEAVLRMLPSLSIVSCNTIIAGRTQNGDSE 256


>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/590 (33%), Positives = 297/590 (50%), Gaps = 82/590 (13%)

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           ++K++H   IK+           LID Y + G + +A  LF+     D   W  ++    
Sbjct: 26  IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACN 85

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL--LMLKQGKQMHAYAMKSGFELD 526
           LSN  HKA  +   +   G + D    ++ +KAC  L  + +K GKQ+HA  + S F  D
Sbjct: 86  LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145

Query: 527 LCVSSGILDMYVK-------------------------------CGAMVDAQSIFNDIPA 555
             V S ++DMY K                                G  ++A  +F + P 
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPF 205

Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGRQ 614
            +  AWT +ISG V +G  + AL ++ +MR  GV + D    + +V A +     E G+Q
Sbjct: 206 KNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQ 265

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H  +I L   S  F+  +LVDMYAKC ++  A  +F +M  ++ V W +++VG AQHG 
Sbjct: 266 VHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGL 325

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
            EE L L++DM   GV+P+ VTF+G++ ACS+ GLVS+    F  M E +GI P ++HY+
Sbjct: 326 AEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYT 385

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            L+D   R+G   EA  LI +MP +       ALL AC+  G+T+    +A+ L+ L+P 
Sbjct: 386 CLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPE 445

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           D S+Y+LLSNI+A A  W++V+  R  M  K VKK P                       
Sbjct: 446 DPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPM 505

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
            D I   +  L   ++  GYVPDT  VLLD++++EKER L++HSE+LA AYGL+   P +
Sbjct: 506 KDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGT 565

Query: 892 VI---------------------LSNKEPLY---ANRFHHLRDGMCPCAD 917
            I                     ++++E +Y     R+HH +DG C C D
Sbjct: 566 TIRIVKNLRVCGDCHTVLKLISAITSRE-IYVRDVKRYHHFKDGKCSCND 614



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/533 (21%), Positives = 210/533 (39%), Gaps = 117/533 (21%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           SQ FS+ R      +  + K  HA+I+ S           L+  Y +CG L  A +LFD 
Sbjct: 14  SQLFSLGR-----KNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDA 68

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVT-EGFRLFRSLRESITFTSRLTLAPLLKLC--L 170
           +P +D ++W ++L+A       N  N+  + F +   +            + L+K C  L
Sbjct: 69  LPQQDHVAWATVLSA------CNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANL 122

Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
            S +V   + +H   L      D+ V  +LV++Y+KF      + +FD + E   + W  
Sbjct: 123 GSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTA 182

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLL 290
           M+  YA +G   E   LF +                                        
Sbjct: 183 MISGYARSGRKLEALELFRE---------------------------------------- 202

Query: 291 YNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY-DSVTFLVALAAVAGTDNLN 349
            +   N+  W   +SG +Q G+ + A+  FV M R  V   D +     + A A +    
Sbjct: 203 -SPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRE 261

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
           LG+Q+H   +  G+ S + + N+L++MY+K                              
Sbjct: 262 LGKQVHCVVITLGYESCLFISNALVDMYAKC----------------------------- 292

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
                     +D VA  +       ++C              KD   + +W ++I G   
Sbjct: 293 ----------SDVVAAKY-------IFCE----------MRRKD---VVSWTSIIVGTAQ 322

Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLC 528
              + +AL L+  M  +G + +E+T    + AC  + ++ +G+ +    ++  G    L 
Sbjct: 323 HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQ 382

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSI 580
             + +LD++ + G + +A+++   +P  PD+  W  ++S C  +G   +A+ I
Sbjct: 383 HYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRI 435



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 178/397 (44%), Gaps = 68/397 (17%)

Query: 30  NLP--SFSLSLLPFL----QKSHFSSSSSSSQWFSILRHA---ISTSDLLLGKSTHARIL 80
           NLP  +FS+SL P L    Q  HF         FS L  A   + +  + LGK  HAR L
Sbjct: 88  NLPHKAFSISL-PILHEGLQPDHFV--------FSSLIKACANLGSVHVKLGKQLHARFL 138

Query: 81  NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG----- 135
            S    D  + ++L+ MY++     Y R +FD + +   ISW ++++ YA SG       
Sbjct: 139 LSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALE 198

Query: 136 ---------------------NAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLCLSSG 173
                                 + N  +   LF  +R E ++    L L+ ++  C +S 
Sbjct: 199 LFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSA 258

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
                + VH   + +G     F+S ALV++Y+K   +  AK++F  M+ +DVV W  ++ 
Sbjct: 259 VRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIV 318

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDLGKRHEEQVQAYAIK 287
             A++G  EE   L+ D+  +G+ P++ +   ++      G++S      +  V+ + I+
Sbjct: 319 GTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIR 378

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTD 346
             L +    + L+++  SG+L   +         N+IR+  V+ D  T+   L+A     
Sbjct: 379 PSLQHYTCLLDLFSR--SGHLDEAE---------NLIRTMPVKPDEPTWAALLSACKHHG 427

Query: 347 NLNLGQQI--HGTTLKSGFYSAVIVGNSLINMYSKMG 381
           N  +  +I  H   LK    S+ I+   L N+Y+  G
Sbjct: 428 NTKMAVRIADHLLDLKPEDPSSYIL---LSNIYAGAG 461


>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 704

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 178/527 (33%), Positives = 289/527 (54%), Gaps = 28/527 (5%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G  TD+FT   ++ A + L + L  ++++     + + ++ +     L   Y +NG +  
Sbjct: 137 GAATDRFTANHLMLAYADLGD-LTAARELFERIPRRNVMSWNI----LFGGYIKNGDLGG 191

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  LF+     ++ATWNAM+ G        ++L  F  M   G   DE  + +  + C  
Sbjct: 192 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAG 251

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           L  +  G+Q+HAY ++SG + D+CV S +  MY++CG + + +++   +P+   V+  T+
Sbjct: 252 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 311

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I+G   NG+ + AL  +  MR  GV  D  TF   + + S L AL QG+QIH  ++K   
Sbjct: 312 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 371

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
                V   LV MY++CG + D+  +F      +T L +AM+     HG+G++ ++LF+ 
Sbjct: 372 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 431

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M   G EP  VTF+ +L ACS++GL  E  + F LM + YG++P V+HY+ +VD LGR+G
Sbjct: 432 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 491

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA  LILSMP      + + LL AC+ Q + +  + +A++++ L+P DS++YVLLSN
Sbjct: 492 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSN 551

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I A + +W DV+  R  M+  NV+K+P                          I   +E 
Sbjct: 552 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 611

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
           ++ +I++ GY PD   VL D+E+EEKE +L +HSEKLA A+  +S P
Sbjct: 612 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLP 658



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 35/276 (12%)

Query: 500 KACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL----DM------------------- 536
           +AC  L  L+Q   +HA+A  SG   D   ++ ++    D+                   
Sbjct: 118 RACRALRPLRQ---LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVM 174

Query: 537 --------YVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
                   Y+K G +  A+ +F+++P  +   W  M++G  + G ++ +L  +  MR  G
Sbjct: 175 SWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREG 234

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           + PDEF    + +  + L  +  GRQ+HA +++     D  VG SL  MY +CG +++  
Sbjct: 235 MHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGE 294

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            + + +   + V  N ++ G  Q+G+ E  L+ F  M++ GV  D VTF+  +S+CS   
Sbjct: 295 AVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLA 354

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
            +++  +  H    K G++  V   + LV    R G
Sbjct: 355 ALAQG-QQIHGQVMKAGVDKVVPVMTCLVHMYSRCG 389



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 142/365 (38%), Gaps = 85/365 (23%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV---------------QYDSVTFLV--- 337
           NV+ WN    GY++ GD  GA + F  M   NV                 +S+ F +   
Sbjct: 172 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 231

Query: 338 ---------ALAAV----AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
                     L +V    AG  ++  G+Q+H   ++SG    + VG+SL +MY + GC+ 
Sbjct: 232 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 291

Query: 384 -------------------------------------CGLRT-----DQFTLASVLRASS 401
                                                C +R+     D  T  S + + S
Sbjct: 292 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 351

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            L   L   +QIH   +K        V T L+ +Y R G + ++E +F    G D    +
Sbjct: 352 DL-AALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 410

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----MHA 516
           AMI  Y    +  KA+ELF  M   G    ++T    + AC    + ++G          
Sbjct: 411 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 470

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
           Y M+   +   CV    +D+  + G + +A+++   +P  PD V W T++S C      D
Sbjct: 471 YGMQPSVKHYTCV----VDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFD 526

Query: 576 LALSI 580
           +A  I
Sbjct: 527 MAERI 531



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 135/373 (36%), Gaps = 68/373 (18%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HA    S    DRF  N+LM  Y+  G L  AR LF+++P R+++SWN +   Y  +
Sbjct: 127 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 186

Query: 133 GE-GNAENV-------------------------TEGFRLFRSLRESITFTSRLTLAPLL 166
           G+ G A  +                          E    F  +R          L  + 
Sbjct: 187 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 246

Query: 167 KLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
           + C     V     VH Y ++ GL  D  V  +L ++Y + G ++E + +   +    +V
Sbjct: 247 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 306

Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYA 285
               ++    +NG  E     F  +   G+  D  +    +   SDL    + +Q+    
Sbjct: 307 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 366

Query: 286 IK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAI 317
           +K             + +Y+                 S+  L +  +S Y   G    AI
Sbjct: 367 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 426

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           E F  M+    +   VTFL  L A +       G D   L  + +G       Y+ V   
Sbjct: 427 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCV--- 483

Query: 371 NSLINMYSKMGCV 383
              +++  + GC+
Sbjct: 484 ---VDLLGRSGCL 493



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 17/301 (5%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+ R      D++ G+  HA ++ S    D  + ++L  MY RCG L     +   +P  
Sbjct: 244 SVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 303

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL---RESITFTSRLTLAPLLKLCLSSGY 174
            ++S N+I+A    +G  ++E   E F + RS+    + +TF S ++       C     
Sbjct: 304 SIVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISS------CSDLAA 355

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
           +   + +HG  +K G+     V   LV++YS+ G + +++ +F G    D  L   M+ A
Sbjct: 356 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 415

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNN 294
           Y  +G G++   LF  +   G  P D +   +L   S  G + EE +  + +    Y   
Sbjct: 416 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLK-EEGMDCFELMTKTYGMQ 474

Query: 295 SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +V    K  +  + +    G ++    +I S  +  D V +   L+A     N ++ ++
Sbjct: 475 PSV----KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAER 530

Query: 354 I 354
           I
Sbjct: 531 I 531



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 36/192 (18%)

Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
           F+ L +A   L  L   RQ+HA       ++D F    L+  YA  G++  A  LF+++ 
Sbjct: 113 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169

Query: 656 MRNTV-------------------------------LWNAMLVGLAQHGNGEETLKLFED 684
            RN +                                WNAM+ GL   G  EE+L  F D
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 229

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           M+  G+ PD      V   C+    V    +  H    + G++ ++   S L     R G
Sbjct: 230 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ-VHAYVVRSGLDRDMCVGSSLAHMYMRCG 288

Query: 745 RTKEAGELILSM 756
             +E GE +L M
Sbjct: 289 CLQE-GEAVLRM 299


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 220/730 (30%), Positives = 352/730 (48%), Gaps = 82/730 (11%)

Query: 182 HGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLF--DGMQERDVVLWKVMLRAYAEN 238
           H  +L  G +   F ++GAL+  Y+    I  A  +      + R   LW  + RA A  
Sbjct: 34  HAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASA 93

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL------GKRHEEQVQAYAIKLLL-- 290
               E   ++  + RSG+ PDD +    L   + +       K  E    A    LLL  
Sbjct: 94  ALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLAD 153

Query: 291 -YNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
            +  N+                        +VV WN  +S  L  G    A    V M+R
Sbjct: 154 VFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMR 213

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------ 379
           S V  +  + +  L A     +   G  +HG  LK G  S V +GN+L++MY K      
Sbjct: 214 SGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLES 273

Query: 380 -------------------MGCVC--GLRTD----------------QFTLASVLRASSS 402
                              +GC    G   D                  TL+S+L A   
Sbjct: 274 SMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVD 333

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
           L    HL K++H ++I+    +D F++  L+D+Y + G   +A  +FEN +  ++ +WNA
Sbjct: 334 LGY-FHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNA 392

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI     +    +A  L   M  +GE  +  T+   + AC  +  +K GKQ+HA++++  
Sbjct: 393 MIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRS 452

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
              DL VS+ ++D+Y KCG +  A+ IF D    D V++ T+I G   +     +L ++ 
Sbjct: 453 LMSDLFVSNALIDVYAKCGQLNLARYIF-DRSEKDGVSYNTLIVGYSQSQCCFESLHLFQ 511

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           QMRL+G+  D  +F   + A S L+A +QG++IH  L+K    S PF+  SL+D+Y K G
Sbjct: 512 QMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGG 571

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            ++ A  +F ++  ++   WN M++G   HG  +   +LF+ MK  G+E D V++I VLS
Sbjct: 572 MLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLS 631

Query: 703 ACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
            CS+ GLV    + F  M  +  I+P+  HY+ +VD LGRAG+  E+ E+I +MPF A++
Sbjct: 632 VCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANS 690

Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEM 822
            +  ALLG+CR+ GD E  +  AE L  L+P +S  Y LL N+++ +  W++    +  M
Sbjct: 691 DVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLM 750

Query: 823 KRKNVKKDPA 832
           K + V+K+PA
Sbjct: 751 KSRKVQKNPA 760



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 145/312 (46%), Gaps = 35/312 (11%)

Query: 71  LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           LGK  H   +  +   D F+ N LM MY++ G    A  +F+ +  R+++SWN+++A   
Sbjct: 339 LGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLT 398

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
            +G   AE   E FRL   ++++    +  TL  LL  C     V   + +H ++++  L
Sbjct: 399 QNG---AE--AEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSL 453

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           + D FVS AL+++Y+K G++  A+++FD   E+D V +  ++  Y+++    E  HLF  
Sbjct: 454 MSDLFVSNALIDVYAKCGQLNLARYIFD-RSEKDGVSYNTLIVGYSQSQCCFESLHLFQQ 512

Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLL------------------- 290
           +  +G+  D  S    L   S+L   +  +++    +K LL                   
Sbjct: 513 MRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGM 572

Query: 291 -------YN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                  +N     +V  WN  + GY   G    A E F  M    ++YD V+++  L+ 
Sbjct: 573 LDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSV 632

Query: 342 VAGTDNLNLGQQ 353
            +    ++ G++
Sbjct: 633 CSHGGLVDRGKK 644


>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
 gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
          Length = 762

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 210/663 (31%), Positives = 334/663 (50%), Gaps = 61/663 (9%)

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLGVIS-DLGKRHEE 279
            R+   W +M+R    +G G +   LF D+ R G   PDD ++  VL V   D+G  H  
Sbjct: 99  RRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCDVGTLHP- 157

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
                  KL      ++VV+ N  L  Y + G    A   F+ M       DS+T+    
Sbjct: 158 ----VVTKLGF---GASVVVCNTLLDAYCKQGFIAAARRVFLEM----PHRDSITYN--- 203

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
           A + G       Q  HG  L+   ++A+                 G+ T  FT +S+L  
Sbjct: 204 AMIMGCSR----QGRHGEALE--LFAAMRRE--------------GVDTSHFTFSSLLTV 243

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           ++ + + LHL +QIH   ++ +   + FV+ AL+D Y +  S+ + + LF+     D  +
Sbjct: 244 ATGMVD-LHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVS 302

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           +N MI     +     AL+LF  M T G     +  A+ +   G L  +K G+Q+HA  +
Sbjct: 303 YNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLI 362

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             G  L+  V + ++DMY KCG +  A++IF        ++WT +I+GCV NG+ + AL 
Sbjct: 363 LHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQ 422

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           ++  MR +G+ PD  T + ++K+SS L  +  GRQ+HA L K       F G +L+DMYA
Sbjct: 423 LFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYA 482

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           KCG +++A   F +M  +N++ WNA++   AQ+G  +  +++F+ M   G+ PD VTF+ 
Sbjct: 483 KCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLS 542

Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
           VL+AC + GL  E  + F LMR  Y + P  EHYS ++D LGRAG   +  ++I  MPFE
Sbjct: 543 VLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFE 602

Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
               +  ++L +CR+ G+ +     AEKL  + P D++AYV+LSNI+A A  W+     +
Sbjct: 603 DDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVK 662

Query: 820 GEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTD 856
             M+ + VKK+                         D I  ++E L + + + GY PDT 
Sbjct: 663 KIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYEPDTS 722

Query: 857 FVL 859
             L
Sbjct: 723 CAL 725



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 149/670 (22%), Positives = 253/670 (37%), Gaps = 159/670 (23%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           + N L+  Y + G +  ARR+F +MP RD I++N+++   +  G        E   LF +
Sbjct: 170 VCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHG-----EALELFAA 224

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +R     TS  T + LL +      +     +HG  ++     + FV+ AL++ YSK   
Sbjct: 225 MRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDS 284

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           + + K LFD M ERD V + VM+ A + N  G     LF D+   G          +L V
Sbjct: 285 LGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSV 344

Query: 270 ISDL-----GKRHEEQVQAYAIKL------------------------LLYNNNSNVVLW 300
              L     G++   Q+  + + L                          Y ++   + W
Sbjct: 345 AGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISW 404

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              ++G +Q G N  A++ F +M R+ +  D  T    + + +    + +G+Q+H    K
Sbjct: 405 TALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTK 464

Query: 361 SGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
           SG   +V  G++L++MY+K GC          L   +R  + +PE             KN
Sbjct: 465 SGHMPSVFSGSALLDMYAKCGC----------LDEAIRTFNEMPE-------------KN 501

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
                                                 TWNA+I  Y     +  A+ +F
Sbjct: 502 SI------------------------------------TWNAVISAYAQYGQAKNAIRMF 525

Query: 481 SHMHTSGERLDEITIATAVKACG-------CLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
             M   G   D +T  + + ACG       C+      +  + Y+M    E   CV    
Sbjct: 526 DSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMR--YYYSMSPWKEHYSCV---- 579

Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +D   + G     Q + +++P  DD + W++++  C   G +DLA       +L  +VP 
Sbjct: 580 IDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAE--KLFTMVPT 637

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           + T  ++                                  L ++YAK GN E A  + K
Sbjct: 638 DATAYVI----------------------------------LSNIYAKAGNWEGAARVKK 663

Query: 653 QMDMRNT----------VLWNAMLVGLAQHGN------GEETLKLFEDMKAHGVEPDSVT 696
            M  R            +     +     H N       +E  +L+E+M   G EPD+  
Sbjct: 664 IMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYEPDTSC 723

Query: 697 FIGVLSACSY 706
            + ++S   Y
Sbjct: 724 ALHMVSMVFY 733



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 152/335 (45%), Gaps = 53/335 (15%)

Query: 42  LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
           +  SHF+ SS       +L  A    DL LG+  H   + ++   + F+ N L+  YS+C
Sbjct: 230 VDTSHFTFSS-------LLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKC 282

Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSR-L 160
            SL   ++LFD+M +RD +S+N +++A + +  G         +LFR + +++ F  R L
Sbjct: 283 DSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGM-----ALQLFRDM-QTLGFDRRTL 336

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
             A LL +  +  ++     +H   +  GL  ++FV  AL+++YSK G +  AK +F   
Sbjct: 337 PYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYK 396

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV------QCVLGVISDLG 274
            ++  + W  ++    +NG  EE   LF D+ R+GL PD  +          L VI  +G
Sbjct: 397 SDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIG-IG 455

Query: 275 KRHEEQVQAY----------------------------AIKLLLYNNNSNVVLWNKKLSG 306
           +    Q+ AY                            AI+        N + WN  +S 
Sbjct: 456 R----QLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISA 511

Query: 307 YLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
           Y Q G    AI  F +M+   +  D VTFL  LAA
Sbjct: 512 YAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAA 546



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 5/223 (2%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S+L  A +   + +G+  HA+++      + F+ N L+ MYS+CG L  A+ +F    
Sbjct: 338 YASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKS 397

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D+  ISW +++     +G+       E  +LF  +R +     R T + ++K   S   +
Sbjct: 398 DKTAISWTALITGCVQNGQNE-----EALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVI 452

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                +H Y  K G +   F   AL+++Y+K G + EA   F+ M E++ + W  ++ AY
Sbjct: 453 GIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAY 512

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
           A+ G  +    +F  +   GLCPD  +   VL      G   E
Sbjct: 513 AQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEE 555


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 214/748 (28%), Positives = 348/748 (46%), Gaps = 127/748 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NVV +   +SG+ +      A+E F  M+ S ++ +  TF+  L A     +  LG Q+H
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV-------------------------------- 383
           G  +K G  S V + N+L+ +Y K G +                                
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279

Query: 384 -----------C-GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                      C GL+ D F+L+++L A +   + +   +Q+H  A+K    +   VS++
Sbjct: 280 EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMK-GQQLHALALKVGLESHLSVSSS 338

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI----------------------- 468
           LI  Y + GS  +   LFE     D+ TW  MI  Y+                       
Sbjct: 339 LIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISY 398

Query: 469 ------LSNN--SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
                 LS N    +ALELF  M   G  + + T+ + + ACG L   K  +Q+  + MK
Sbjct: 399 NAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMK 458

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLAL 578
            G   + C+ + ++DMY +CG M DA+ IF      +D     T+MI G   NG+ + A+
Sbjct: 459 FGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAI 518

Query: 579 SIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           S++H  +  G +V DE     ++     +   E G Q+H + +K    ++  VG + V M
Sbjct: 519 SLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSM 578

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+KC N++DA  +F  M+M++ V WN ++ G   H  G++ L +++ M+  G++PDS+TF
Sbjct: 579 YSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITF 638

Query: 698 IGVLSACSYT--GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
             ++SA  +T   LV      F  M  ++ I+P +EHY+  +  LGR G  +EA + I +
Sbjct: 639 ALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRN 698

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
           MP E    + RALL +CR+  +    K  A  ++A+EP D  +Y+L SN+++A+ +W   
Sbjct: 699 MPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYS 758

Query: 816 TSARGEMKRKNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYV 852
              R +M+ K  +K P+                         I++ +E LI    + GYV
Sbjct: 759 EKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYV 818

Query: 853 PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------- 893
           PDT FVL +VEE +K+  L+YHS KLA  +G++ T P   I                   
Sbjct: 819 PDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYV 878

Query: 894 --LSNKEPLYANR--FHHLRDGMCPCAD 917
             ++ ++ L  +   FH   DG C C D
Sbjct: 879 SIVTRRKILLRDTSGFHWFIDGQCSCTD 906



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 174/714 (24%), Positives = 316/714 (44%), Gaps = 99/714 (13%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           SLS   F  +S  +S S+ +  F +LR +    D  L ++ HA+ L   +  D FL N L
Sbjct: 79  SLSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLKLEE--DIFLGNAL 136

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           ++ Y + G +  A ++F  +   +++S+ ++++ ++ S   +     E   LF ++ +S 
Sbjct: 137 ISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWED-----EAVELFFAMLDSG 191

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              +  T   +L  C+ +        VHG  +K+GL+   F+  AL+ +Y K G +    
Sbjct: 192 IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVL 251

Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR-SGLCPDDESVQCVLGVISDL 273
            LF+ M ERD+  W  ++ +  +    +E F  F  +    GL  D  S+  +L   +  
Sbjct: 252 RLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGS 311

Query: 274 GKRHE-EQVQAYAIKLLLYNNNS----------------------------NVVLWNKKL 304
            K  + +Q+ A A+K+ L ++ S                            +V+ W   +
Sbjct: 312 VKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMI 371

Query: 305 SGYLQVGDNHGAIECFVNMIRSN-VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + Y++ G    A+E F  M + N + Y++V     LA ++  D+ +   ++    L+ G 
Sbjct: 372 TSYMEFGMLDSAVEVFNKMPKRNCISYNAV-----LAGLSRNDDGSRALELFIEMLEEGV 426

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
             +     S+I         CGL                  +   +S+QI    +K   +
Sbjct: 427 EISDCTLTSIIT-------ACGLL-----------------KSFKVSQQIQGFVMKFGIL 462

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENK--DGFDLATWNAMIFGYILSNNSHKALELFS 481
           ++S + TAL+D+Y R G M +AE +F  +  +    A   +MI GY  +   ++A+ LF 
Sbjct: 463 SNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFH 522

Query: 482 HMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
              + G   +DE+   + +  CG +   + G QMH +A+KSG   +  V +  + MY KC
Sbjct: 523 SGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKC 582

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             M DA  +FN +   D V+W  +++G V + + D AL I+ +M  +G+ PD  TFA+++
Sbjct: 583 WNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGI--------------SLVDMYAKCGNIED 646
            A             H  L  +D     FV +              S + +  + G +E+
Sbjct: 643 SAYK-----------HTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEE 691

Query: 647 AYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFI 698
           A    + M +   V +W A+L     + N  E L+         VEP D +++I
Sbjct: 692 AEQTIRNMPLEPDVYVWRALLNSCRINKN--ERLEKLAARNILAVEPKDPLSYI 743



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 43/411 (10%)

Query: 386 LRTDQFTLAS---VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSM 442
           L T   T+AS   +LR S+   +   L++ +H   +K +   D F+  ALI  Y + G +
Sbjct: 90  LNTSLSTIASPFDLLRLSTRYGDP-DLARAVHAQFLKLE--EDIFLGNALISAYLKLGLV 146

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
            +A+ +F      ++ ++ A+I G+  S+   +A+ELF  M  SG   +E T    + AC
Sbjct: 147 RDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTAC 206

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
              +  + G Q+H   +K G    + + + ++ +Y KCG +     +F ++P  D  +W 
Sbjct: 207 IRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWN 266

Query: 563 TMISGCVDNGEEDLALSIYHQMRL-SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
           T+IS  V   + D A   +  M+L  G+  D F+ + L+ A +      +G+Q+HA  +K
Sbjct: 267 TVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALK 326

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW------------------- 662
           +   S   V  SL+  Y KCG+  D   LF+ M +R+ + W                   
Sbjct: 327 VGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEV 386

Query: 663 ------------NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY--TG 708
                       NA+L GL+++ +G   L+LF +M   GVE    T   +++AC    + 
Sbjct: 387 FNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSF 446

Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
            VS+  + F +   K+GI       + LVD   R GR ++A ++      E
Sbjct: 447 KVSQQIQGFVM---KFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLE 494


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 203/618 (32%), Positives = 309/618 (50%), Gaps = 91/618 (14%)

Query: 385 GLRTDQFTLASVLRASSSLPEG---LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           G R D +T  ++L+A +    G      ++ +H H ++     ++ V+++L+  Y   G 
Sbjct: 14  GGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGD 73

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
            A A  L    D      WNA+I G+       ++   F  M  +G     +T  + + A
Sbjct: 74  GAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSA 131

Query: 502 CG-----CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC---------------- 540
           CG      LL    G Q+H   + SG   DL V + ++DMY +C                
Sbjct: 132 CGKGTRDVLL----GMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVR 187

Query: 541 ---------------GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
                          G + +A+ +F+ +P  D V+WT MI G V       AL ++ +M+
Sbjct: 188 SVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQ 247

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
            S V  DEFT   ++ A + L ALE G  +   + +     D FVG +L+DMY+KCG+IE
Sbjct: 248 YSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIE 307

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
            A  +FK M  R+   W A+++GLA +G  EE +++F  M      PD VTFIGVL+AC+
Sbjct: 308 RALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACT 367

Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
           + GLV +  E F  M E Y I P V HY  ++D LGRAG+  EA + I  MP   ++++ 
Sbjct: 368 HAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIW 427

Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
             LL ACRV G++E G+ VAE+L+ L+P +S  Y+LLSNI+A  N+W+DV   R  +  K
Sbjct: 428 GTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEK 487

Query: 826 NVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
            +KK+P                       +  I++K+E +I  +   GY PD   V ++V
Sbjct: 488 GIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEV 547

Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY 901
            E+EK++ LY+HSEKLA A+ L+S+ P++VI                     L  +E + 
Sbjct: 548 AEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVV 607

Query: 902 AN--RFHHLRDGMCPCAD 917
            +  RFHH R G C C D
Sbjct: 608 RDRTRFHHFRHGFCSCKD 625



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 37/273 (13%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRH-AISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           F  S   F+  +   ++ +   + S+L      T D+LLG   H R++ S  +PD  + N
Sbjct: 103 FGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVEN 162

Query: 93  NLMTMYSRC-------------------------------GSLVYARRLFDKMPDRDLIS 121
            L+ MY+ C                               G +  AR LFD+MP+RD +S
Sbjct: 163 ALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVS 222

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           W +++  Y       A    E   +FR ++ S       T+  ++  C   G +   E V
Sbjct: 223 WTAMIDGYVW-----AARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWV 277

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
             Y  + G+  D FV  AL+++YSK G I  A  +F GM  RD   W  ++   A NG+ 
Sbjct: 278 RVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYE 337

Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           EE   +F  + R    PD+ +   VL   +  G
Sbjct: 338 EEAIEMFHRMIRVSETPDEVTFIGVLTACTHAG 370



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 212/485 (43%), Gaps = 39/485 (8%)

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV-VLWKV 230
           SG    +  VH + +++G+  +  V+ +LV  Y+  G    A+ L   + E D  V W  
Sbjct: 36  SGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARAL---VGECDTPVAWNA 92

Query: 231 MLRAYAENG-FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLL 289
           ++  +   G FGE     FVD+ R+G  P   +    + V+S  GK   + +    +   
Sbjct: 93  LISGHNRGGRFGESCGS-FVDMARAGAAPTPVTY---VSVLSACGKGTRDVLLGMQVHGR 148

Query: 290 LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTD 346
           +  +    ++ + N  +  Y +  D   A + F  M +RS V + S   L  LA +   D
Sbjct: 149 VVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTS--LLSGLARLGQVD 206

Query: 347 -------NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
                   +     +  T +  G+  A     +L  M+ +M     +  D+FT+ SV+ A
Sbjct: 207 EARDLFDRMPERDTVSWTAMIDGYVWAARFREAL-EMFREMQ-YSNVSADEFTMVSVITA 264

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            + L   L + + + V+  +     D+FV  ALID+Y + GS+  A  +F+     D  T
Sbjct: 265 CAQLG-ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFT 323

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-----M 514
           W A+I G  ++    +A+E+F  M    E  DE+T    + AC    ++ +G++     +
Sbjct: 324 WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGE 573
            AY +        C    I+D+  + G + +A    + +P  P+   W T+++ C  +G 
Sbjct: 384 EAYNIAPNVVHYGC----IIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGN 439

Query: 574 EDLALSIYHQMRLSGVVPD-EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
            ++   +    RL  + P+    + +L    +     E  R++   +++     +P  G 
Sbjct: 440 SEIGELVAE--RLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEP--GC 495

Query: 633 SLVDM 637
           SL++M
Sbjct: 496 SLIEM 500



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 11/251 (4%)

Query: 476 ALELFSHMHTSGERLDEITIATAVKA----CGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
           A+  ++ M   G R D  T    +KA     G        + +HA+ ++ G   +  V+S
Sbjct: 3   AVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVAS 62

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++  Y   G    A+++  +   P  VAW  +ISG    G    +   +  M  +G  P
Sbjct: 63  SLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAAP 120

Query: 592 DEFTFAILVKASSCLTA-LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
              T+  ++ A    T  +  G Q+H  ++      D  V  +LVDMYA+C ++  A+ +
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKV 180

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M +R+ V W ++L GLA+ G  +E   LF+ M     E D+V++  ++    +    
Sbjct: 181 FDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP----ERDTVSWTAMIDGYVWAARF 236

Query: 711 SEAYENFHLMR 721
            EA E F  M+
Sbjct: 237 REALEMFREMQ 247



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 10/263 (3%)

Query: 577 ALSIYHQMRLSGVVPDEFTFAILVKASSCLT----ALEQGRQIHANLIKLDCSSDPFVGI 632
           A++ Y +M   G  PD +TF  L+KA +       +    R +HA++++L    +  V  
Sbjct: 3   AVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVAS 62

Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
           SLV  Y   G+   A  L  + D    V WNA++ G  + G   E+   F DM   G  P
Sbjct: 63  SLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAP 120

Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
             VT++ VLSAC             H      G+ P++   + LVD          A ++
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKV 180

Query: 753 ILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQW 812
              M   +  S    L G  R+ G  +  + + ++   +   D+ ++  + + +  A ++
Sbjct: 181 FDGMQVRSVVSWTSLLSGLARL-GQVDEARDLFDR---MPERDTVSWTAMIDGYVWAARF 236

Query: 813 DDVTSARGEMKRKNVKKDPADLI 835
            +      EM+  NV  D   ++
Sbjct: 237 REALEMFREMQYSNVSADEFTMV 259



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 18/235 (7%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           D Y     F  +L  F +  + + S+      S++        L +G+     +      
Sbjct: 228 DGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK 287

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
            D F+ N L+ MYS+CGS+  A  +F  M  RD  +W +I+   A +  G  E   E F 
Sbjct: 288 MDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVN--GYEEEAIEMFH 345

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYV-----WASETVHGYALKIGLVWDEFVSGAL 200
             R +R S T    +T   +L  C  +G V     +    +  Y +   +V      G +
Sbjct: 346 --RMIRVSET-PDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVH----YGCI 398

Query: 201 VNIYSKFGKIREAKFLFDGM-QERDVVLWKVML---RAYAENGFGEEVFHLFVDL 251
           +++  + GKI EA    D M    +  +W  +L   R +  +  GE V    ++L
Sbjct: 399 IDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLEL 453


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 203/657 (30%), Positives = 319/657 (48%), Gaps = 102/657 (15%)

Query: 357  TTLKSGFY---SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
            T L SGF    S+ +V      M +K  C      +Q+TL+S+ +  S L   L L K +
Sbjct: 359  TILISGFSRAGSSEVVFKLFREMRAKGAC-----PNQYTLSSLFKCCS-LDINLQLGKGV 412

Query: 414  HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
            H   ++N   AD  +  +++D+Y +      AE +FE  +  D+ +WN MI  Y+ + + 
Sbjct: 413  HAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDV 472

Query: 474  HKALELFSH-------------------------------MHTSGERLDEITIATAVKAC 502
             K+L++F                                 M   G     +T + A+   
Sbjct: 473  EKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILS 532

Query: 503  GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-------- 554
              L +++ G+Q+H   +K GF  D  + S +++MY KCG M +A  +  D+P        
Sbjct: 533  SSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGN 592

Query: 555  --------APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
                        V+W  M+SG V NG+ +  L  +  M    VV D  T   ++ A +  
Sbjct: 593  AGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANA 652

Query: 607  TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
              LE GR +HA   K+    D +VG SL+DMY+K G+++DA+ +F+Q +  N V W +M+
Sbjct: 653  GILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMI 712

Query: 667  VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
             G A HG G++ + LFE+M   G+ P+ VTF+GVL+AC + GL+ E    F +M++ Y I
Sbjct: 713  SGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCI 772

Query: 727  EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
             P VEH + +VD  GRAG   E    I         S+ ++ L +CR+  + E GKWV+E
Sbjct: 773  NPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSE 832

Query: 787  KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------- 832
             L+ + P D  AYVLLSN+ A+ ++WD+    R  M ++ +KK P               
Sbjct: 833  MLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFI 892

Query: 833  ---------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                     + I++ ++ LI R+KE GY  D   V+ DVEEE+ E  + +HSEKLA  +G
Sbjct: 893  MGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFG 952

Query: 884  LISTP---PSSVI------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
            +I+T    P  +I                  L ++E +  +  RFHH + G C C D
Sbjct: 953  IINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGD 1009



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 174/675 (25%), Positives = 301/675 (44%), Gaps = 96/675 (14%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+    IS     LG + HA  + +  +      N L+T+Y +  ++ +AR+LFD++P R
Sbjct: 295 SLFHSTISNGPPPLG-TLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQR 353

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           +  +W  +++ ++ +G  ++E V   F+LFR +R      ++ TL+ L K C     +  
Sbjct: 354 NTQTWTILISGFSRAG--SSEVV---FKLFREMRAKGACPNQYTLSSLFKCCSLDINLQL 408

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH + L+ G+  D  +  +++++Y K      A+ +F+ M E DVV W +M+ AY  
Sbjct: 409 GKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLR 468

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
            G  E+   +F                                      + L Y    +V
Sbjct: 469 AGDVEKSLDMF--------------------------------------RRLPYK---DV 487

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
           V WN  + G +Q G    A+E    M+    ++  VTF +AL   +    + LG+Q+HG 
Sbjct: 488 VSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGM 547

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
            LK GF     + +SL+ MY    C CG R D  ++               + K + +  
Sbjct: 548 VLKFGFCRDGFIRSSLVEMY----CKCG-RMDNASI---------------VLKDVPLDF 587

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
           +KN              V C+           E K G  + +W  M+ GY+ +      L
Sbjct: 588 LKNGNAG----------VTCK-----------ELKAG--IVSWGLMVSGYVWNGKYEDGL 624

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           + F  M      +D  T+ T + AC    +L+ G+ +HAY  K G  +D  V S ++DMY
Sbjct: 625 KTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMY 684

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            K G++ DA +IF     P+ V WT+MISGC  +G+   A+ ++ +M   G++P+E TF 
Sbjct: 685 SKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFL 744

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFV--GISLVDMYAKCGNI-EDAYILFKQM 654
            ++ A      LE+G + +  ++K     +P V    S+VD+Y + G++ E    +F+  
Sbjct: 745 GVLNACCHAGLLEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENG 803

Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
               T +W + L     H N E   K   +M       D   ++ + + C+      EA 
Sbjct: 804 ISHLTSVWKSFLSSCRLHKNVEMG-KWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAA 862

Query: 715 ENFHLMREKYGIEPE 729
               LM ++ GI+ +
Sbjct: 863 RVRSLMHQR-GIKKQ 876


>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/536 (35%), Positives = 284/536 (52%), Gaps = 49/536 (9%)

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGER 489
           A+++ YC NG + +A  LF      D+ +W ++I G   +  S++AL  F +M   SG  
Sbjct: 190 AMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVG 249

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF--ELDLCVSSGILDMYVKCGAMVDAQ 547
           +   T+   + A   +L    G Q+H    K GF   LD  VS+ ++  Y  C  M DA 
Sbjct: 250 ISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDAC 309

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F +    + V WT +++GC  N +   AL ++ +M    VVP+E +F   + +   L 
Sbjct: 310 KVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLE 369

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            LE+GR IHA  IK+   +  + G SLV MY+KCG I DA  +FK +  +N V WN+++V
Sbjct: 370 DLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIV 429

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G AQHG G   L LF++M   GVE D +T  G+LSACS +G++ +A   F     K  ++
Sbjct: 430 GCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMK 489

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
             VEHY+ +VD LGR G  +EA  L  SMP EA++ +   LL ACRV    +  +  A++
Sbjct: 490 LTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKR 549

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA--------------- 832
           +  +EP  S+AYVLLSN++A++ +W +V   R +MK   + K P                
Sbjct: 550 IFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLS 609

Query: 833 --------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL 884
                   + I+ K+  L  +++E GY+PD  F L DVE E+ E  L YHSE+LA A+GL
Sbjct: 610 ADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGL 669

Query: 885 ISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           +ST   S I                     + N+E +   ++RFHH ++G+C C D
Sbjct: 670 LSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGD 725



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 236/601 (39%), Gaps = 134/601 (22%)

Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL----RESITFTSRLTL 162
           AR +F+K+P   +  +  +L AYAH+      N+ E   LF  +    +++I++ S +  
Sbjct: 76  ARAVFNKIPSPHVSLYTKLLLAYAHN-----NNLHEAINLFNQIPSNTKDTISWNSVIKA 130

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ- 221
           +      + + +V A +       +  + W   + G L       G++ EA+  F+ M  
Sbjct: 131 S-----IICNDFVTAVKLFDEMPQRNSISWTTIIHGFLST-----GRVNEAERFFNAMPY 180

Query: 222 -ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
            ++DV  W  M+  Y  NG   +   LF  +                             
Sbjct: 181 VDKDVATWNAMVNGYCNNGRVNDALRLFCQMP---------------------------- 212

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQYDSVTFLVAL 339
                        + +V+ W   + G  + G ++ A+  F NM+  S V   S T +  L
Sbjct: 213 -------------SRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGL 259

Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
           +A A   +   G QIH    K GF                    CGL             
Sbjct: 260 SAAAKILDFYAGIQIHCCMFKFGF-------------------CCGL------------- 287

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
                                    D FVS +L+  Y     M +A  +F      ++  
Sbjct: 288 -------------------------DEFVSASLVTFYASCKRMGDACKVFGETVCKNVVV 322

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W A++ G  L++   +ALE+FS M       +E +  +A+ +C  L  L++G+ +HA  +
Sbjct: 323 WTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGI 382

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
           K G E  +   + ++ MY KCG + DA  +F  I   + V+W ++I GC  +G    AL 
Sbjct: 383 KMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALV 442

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVD 636
           ++ +M   GV  DE T   L+ A S    L++ R       +   +  + + +    +VD
Sbjct: 443 LFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYA--CMVD 500

Query: 637 MYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMKAHGVEP 692
           +  +CG +E+A  L   M +  N+++W  +L     H +    E   K   +M     EP
Sbjct: 501 VLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEM-----EP 555

Query: 693 D 693
           D
Sbjct: 556 D 556



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 37/345 (10%)

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           +N  +  A  +F       ++ +  ++  Y  +NN H+A+ LF+ + ++ +  D I+  +
Sbjct: 69  KNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTK--DTISWNS 126

Query: 498 AVKA---CGCLLM-------LKQGKQMHAYAMKSGF-------------------ELDLC 528
            +KA   C   +        + Q   +    +  GF                   + D+ 
Sbjct: 127 VIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVA 186

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLS 587
             + +++ Y   G + DA  +F  +P+ D ++WT++I G   NG+   AL  +  M   S
Sbjct: 187 TWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFS 246

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD--CSSDPFVGISLVDMYAKCGNIE 645
           GV     T    + A++ +     G QIH  + K    C  D FV  SLV  YA C  + 
Sbjct: 247 GVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMG 306

Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           DA  +F +   +N V+W A+L G   +    E L++F +M    V P+  +F   L++C 
Sbjct: 307 DACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSC- 365

Query: 706 YTGLVS-EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
             GL   E     H    K G+E  V   + LV    + G   +A
Sbjct: 366 -VGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDA 409



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 138/343 (40%), Gaps = 51/343 (14%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHA-RILNSSQIPDRFLT--NNLMTMYSRCGSLVYAR 108
           +S  W +I+   +ST     G+   A R  N+    D+ +   N ++  Y   G +  A 
Sbjct: 151 NSISWTTIIHGFLST-----GRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDAL 205

Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT----SRLTLAP 164
           RLF +MP RD+ISW SI+     +G+       +    F+++   + F+    S  TL  
Sbjct: 206 RLFCQMPSRDVISWTSIIVGLDRNGKS-----YQALFFFKNM---VGFSGVGISSTTLVC 257

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLV--WDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
            L         +A   +H    K G     DEFVS +LV  Y+   ++ +A  +F     
Sbjct: 258 GLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVC 317

Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV- 281
           ++VV+W  +L     N    E   +F ++ R  + P++ S    L     L    + +V 
Sbjct: 318 KNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVI 377

Query: 282 QAYAIKLLL----YNNNS------------------------NVVLWNKKLSGYLQVGDN 313
            A  IK+ L    Y  NS                        NVV WN  + G  Q G  
Sbjct: 378 HAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCG 437

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
             A+  F  M+R  V+ D +T    L+A + +  L   +   G
Sbjct: 438 TWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFG 480



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 41  FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
           F +   F+   + S + S L   +   DL  G+  HA  +        +  N+L+ MYS+
Sbjct: 343 FSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSK 402

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS-LRESITFTSR 159
           CG +  A  +F  + +++++SWNS++   A  G G     T    LF+  LRE +  +  
Sbjct: 403 CGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCG-----TWALVLFKEMLREGVE-SDE 456

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALK---IGLVWDEFVSGALVNIYSKFGKIREAKFL 216
           +TL  LL  C  SG +  +    GY  +   + L  + +    +V++  + G++ EA+ L
Sbjct: 457 ITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHY--ACMVDVLGRCGEVEEAEAL 514

Query: 217 FDGMQ-ERDVVLWKVMLRA 234
              M  E + ++W V+L A
Sbjct: 515 ATSMPVEANSMVWLVLLSA 533


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 200/597 (33%), Positives = 300/597 (50%), Gaps = 88/597 (14%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           + L +Q H   + +    ++F++  ++ +Y  +G +  A  +F+  D      +N++I  
Sbjct: 93  IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152

Query: 467 YI---LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           Y            LE ++ MH  G   D  T+   +K+C  L  +  G+ +H   ++ G 
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGL 212

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFN---------------------DIPAPDD---- 558
           E D  V + ++DMYVKCG + DA+ +F+                     +I   +D    
Sbjct: 213 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFER 272

Query: 559 ------VAWTTMISGCVDNGEEDLALSIYHQMRLSG--VVPDEFTFAILVKASSCLTALE 610
                 V+WT MISG   NG  + AL ++ +M   G  + P+  T   ++ A +   ALE
Sbjct: 273 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 332

Query: 611 QGRQIH--ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM--DMRNTVLWNAML 666
           +GR+IH  AN I L  +S   V  +L  MYAKC ++ +A   F  +  + +N + WN M+
Sbjct: 333 RGRRIHDFANGIGLHLNSS--VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMI 390

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
              A HG G E + +FE+M   GV+PD+VTF+G+LS CS++GL+     +F+ M   + +
Sbjct: 391 TAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSV 450

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
           EP VEHY+ +VD LGRAGR  EA ELI  MP +A  S+  ALL ACR   + E  +  A 
Sbjct: 451 EPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAAR 510

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP--------------- 831
           +L  LEP +S  YVLLSN++A A  W++V   R  +K + +KK P               
Sbjct: 511 RLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFM 570

Query: 832 --------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG 883
                   A  I+  +E L ++IK  GY+PDT FVL D+ EEEKE  L  HSEKLA A+G
Sbjct: 571 GADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFG 630

Query: 884 LISTPPSSVILSNKE---------------PLYA--------NRFHHLRDGMCPCAD 917
           L++T P  V+   K                 +Y         NRFH  +DG C C D
Sbjct: 631 LLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGD 687



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 176/394 (44%), Gaps = 39/394 (9%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGA---IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
           +N + +L+N  +  Y + G        +E +  M    +  D+ T    L + A    + 
Sbjct: 139 DNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVC 198

Query: 350 LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
           +G+ +HG  L+ G      VG SLI+MY K    CG+  D   L                
Sbjct: 199 MGRCVHGQGLRVGLEGDFYVGASLIDMYVK----CGVIGDARKL---------------F 239

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            K I         V D     ALI  Y + G +  AE LFE  +  ++ +W AMI GY  
Sbjct: 240 DKMI---------VRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQ 290

Query: 470 SNNSHKALELFSHMHTSGERLDE--ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           +  + +AL LF  M   G  +    +TI + + AC     L++G+++H +A   G  L+ 
Sbjct: 291 NGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNS 350

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIP--APDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
            V + +  MY KC ++V+A+  F+ I     + +AW TMI+    +G    A+SI+  M 
Sbjct: 351 SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENML 410

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGN 643
            +GV PD  TF  L+   S    ++ G   H N +    S +P V     +VD+  + G 
Sbjct: 411 RAGVQPDAVTFMGLLSGCSHSGLIDAGLN-HFNDMGTIHSVEPRVEHYACVVDLLGRAGR 469

Query: 644 IEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           + +A  L  QM M+    +W A+L     H N E
Sbjct: 470 LVEAKELISQMPMQAGPSVWGALLAACRSHRNLE 503



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 166/411 (40%), Gaps = 80/411 (19%)

Query: 32  PSFSLSLLPFLQK--SHFSSSSSSSQWFSIL-RHAISTSDLLLGKSTHARILNSSQIPDR 88
           PS +L L   LQ    HF   SS +  F  L RH      + LG+  HA+I+     P+ 
Sbjct: 57  PSLNLQLRILLQPILQHFPHPSSYAPIFQFLTRHNF----IKLGQQAHAQIVLHGLQPNA 112

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           FL   ++ MY+  G L  A  +FD++ +   + +NSI+ AY     G           + 
Sbjct: 113 FLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTR--HGXXXXXXXXLEAYA 170

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
            +          TL  +LK C     V     VHG  L++GL  D +V  +L+++Y K G
Sbjct: 171 RMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCG 230

Query: 209 KIREAKFLFDG-------------------------------MQERDVVLWKVMLRAYAE 237
            I +A+ LFD                                M+ R++V W  M+  Y +
Sbjct: 231 VIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQ 290

Query: 238 NGFGEEVFHLFVDLHRSG--LCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKL-- 288
           NGF E+   LF ++ + G  + P+  ++  VL   +     + G+R  +      + L  
Sbjct: 291 NGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNS 350

Query: 289 ------------------------LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                   ++  N  N++ WN  ++ Y   G    A+  F NM+
Sbjct: 351 SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENML 410

Query: 325 RSNVQYDSVTFLVALAAV-------AGTDNLNLGQQIHGTTLKSGFYSAVI 368
           R+ VQ D+VTF+  L+         AG ++ N    IH    +   Y+ V+
Sbjct: 411 RAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVV 461


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 210/694 (30%), Positives = 333/694 (47%), Gaps = 106/694 (15%)

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           ++ +   +Q DS  F  A+ +   ++++++   IH    ++G  S+  + N L+ M +K 
Sbjct: 35  LDSLEREIQSDS--FAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKH 89

Query: 381 GCVCGLRT----------------------------------------DQFTLASVLRAS 400
           G +C  R+                                           T A+ L A 
Sbjct: 90  GSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMTFATALSAC 149

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFV-STALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           SSL + L   ++IH     +  +  S +  TA+  +Y + G ++ A+ +F+     ++ +
Sbjct: 150 SSLGD-LQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVS 208

Query: 460 WNAMIFGYILSNNSH-KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
           WNA+I  Y  S +SH +AL+LF  M   G R    T    + AC  +  L++   +HA  
Sbjct: 209 WNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK---IHARI 265

Query: 519 MKSGFELDL---CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
           +++G + D+    V + +L+MY KCG++  A+ IF  +   D V+   MI+     G   
Sbjct: 266 VETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGK 325

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI-----KLDCSSDPFV 630
            ++ ++ +M L G+  D+ TFA ++ A SC  ALE G++IH  ++     +  C  +  V
Sbjct: 326 ESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVV 385

Query: 631 GISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
             +LV MY KCG +E A  +FK M  +N+V WNAML   A  G G+E           GV
Sbjct: 386 ETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGV 445

Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
           E DS +FI VL ACS++G++  AY++F LM   + + P  E+Y  +VD L R+GR  +A 
Sbjct: 446 ELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDAD 505

Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
           EL+ SMPF   A   R LLG CRVQG  E     AE+   LEP +++ Y LLS++++A  
Sbjct: 506 ELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATG 565

Query: 811 QWDDVTSARGEMKRKNVKK------------------------DPADLIFAKVEGLIKRI 846
           + D++   R  MK + ++K                           D I  +++ L   +
Sbjct: 566 KKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVEL 625

Query: 847 KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----- 901
           K+ G+VP TD V+ D++ E+KE  L  HSEKLA A+GLIST     +L  K         
Sbjct: 626 KQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCH 685

Query: 902 ------------------ANRFHHLRDGMCPCAD 917
                             ANRFH  + G C C D
Sbjct: 686 GAIKLISKLRSRVITVRDANRFHRFQSGTCSCGD 719



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 229/518 (44%), Gaps = 49/518 (9%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
           H +I  +      +L N L+ M ++ GSL  AR +FD +  +++ SWN I++AYAH G  
Sbjct: 64  HQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRG-- 121

Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG-YALKIGLVWDE 194
              + +    LF  +    T    +T A  L  C S G +     +H       G+    
Sbjct: 122 ---HPSTALHLFAKMDVPPT---AMTFATALSACSSLGDLQRGREIHARIKASRGIRPSV 175

Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG-EEVFHLFVDLHR 253
            +  A+ ++Y+K G +  AK +FD +  ++VV W  ++ AYA++G    +   LF  +  
Sbjct: 176 ILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAE 235

Query: 254 SGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
            G+ P   +   VLG  +D+     E++ A  ++  L  +  +V + N  L+ Y +    
Sbjct: 236 HGVRPCRATFVGVLGACNDVTSL--EKIHARIVETGLQFDVRDVGVQNALLNMYAKC--- 290

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
            G++E   ++ R   + D V+  V +A  A        QQ               +G   
Sbjct: 291 -GSLEVARDIFRKMQRRDQVSMNVMIATFA--------QQ--------------GLGKES 327

Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI-----KNDTVADSFV 428
           I ++ +M  + GL  D  T ASV+ A S     L   K+IH   +     +   + +  V
Sbjct: 328 IQVFREMD-LEGLPQDDTTFASVITACSCCG-ALEFGKRIHKRVVEPVLGRKCCLPNVVV 385

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
            TAL+ +Y + G++ +A+ +F+     +  +WNAM+          +A          G 
Sbjct: 386 ETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGV 445

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS--GILDMYVKCGAMVDA 546
            LD  +  + + AC    ML+     H   M S F+L     +   ++D+  + G + DA
Sbjct: 446 ELDSASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDA 504

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ 583
             + N +P +PD +AW T++ GC   G  + A S   Q
Sbjct: 505 DELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQ 542



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 164/346 (47%), Gaps = 37/346 (10%)

Query: 12  RHKHTY---VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSD 68
           +HK+ +   +I S++    +R  PS +L L      +      ++  + + L    S  D
Sbjct: 103 QHKNIFSWNIIISAYA---HRGHPSTALHLF-----AKMDVPPTAMTFATALSACSSLGD 154

Query: 69  LLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           L  G+  HARI  S  I P   L   + +MY++CG L  A+ +FD++P ++++SWN+++A
Sbjct: 155 LQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIA 214

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
           AYA SG  +     +   LF  + E      R T   +L  C     V + E +H   ++
Sbjct: 215 AYAQSGHSH----HQALDLFEKMAEHGVRPCRATFVGVLGAC---NDVTSLEKIHARIVE 267

Query: 188 IGL---VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEV 244
            GL   V D  V  AL+N+Y+K G +  A+ +F  MQ RD V   VM+  +A+ G G+E 
Sbjct: 268 TGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKES 327

Query: 245 FHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAI--KLLLYNNNSNV 297
             +F ++   GL  DD +   V+   S     + GKR  ++V    +  K  L     NV
Sbjct: 328 IQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCL----PNV 383

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           V+    +S Y + G    A   F  M   N    SV++   LAA A
Sbjct: 384 VVETALVSMYGKCGTLEQAKAVFKAMTTKN----SVSWNAMLAACA 425



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 32/181 (17%)

Query: 69  LLLGKSTHARIL-----NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
           L  GK  H R++         +P+  +   L++MY +CG+L  A+ +F  M  ++ +SWN
Sbjct: 359 LEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWN 418

Query: 124 SILAAYAHSGEGN------AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           ++LAA AH G+G+           EG  L     +S +F S      +L  C  SG +  
Sbjct: 419 AMLAACAHQGQGDEAAAFLRAAACEGVEL-----DSASFIS------VLIACSHSGML-- 465

Query: 178 SETVHGYALKIGLVWDEFVSGA-----LVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
            E  + +  ++ L   + V  A     +V++ ++ G++ +A  L + M    D + W+ +
Sbjct: 466 -EVAYDH-FQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTL 523

Query: 232 L 232
           L
Sbjct: 524 L 524


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/580 (31%), Positives = 309/580 (53%), Gaps = 46/580 (7%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +VV WN  +S +L       A +  ++M+RS V  +  + +  + A         G  +H
Sbjct: 141 DVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVH 200

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------------CGLRT 388
           G  LK+G  S V +GN+L++MY K G V                            GL  
Sbjct: 201 GLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYG 260

Query: 389 DQFTLASVLRASSSLPEGLHLS---------------KQIHVHAIKNDTVADSFVSTALI 433
           D   L   +     +P  + LS               +++H ++IK     D FV+ +L+
Sbjct: 261 DVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLV 320

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
           D+Y + GS+ +A  +FE  +  ++ +WNAMI   + +    +A  L   M   GE  + I
Sbjct: 321 DMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSI 380

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T+   + AC  +  LK GKQ+HA+++++G   DL +S+ ++DMY KCG +  AQSIF D+
Sbjct: 381 TLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DL 439

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              DDV++ T+I G   +     +L+++ Q+   G+  D  +F   + A + L++ +QG+
Sbjct: 440 SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGK 499

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           +IH  L++   S+ PF+  +L+ +Y K G ++ A  +F ++  ++   WN M++G   HG
Sbjct: 500 EIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHG 559

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF-HLMREKYGIEPEVEH 732
             +    LF+ MK HGV  D V++I VLS CS+ GLV    + F H++ +   +EP+  H
Sbjct: 560 QIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQN--LEPQQMH 617

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y+ +VD LGR+G+  E+ E+IL MPF A++ +  ALLGACR+ G+ E  ++ A+ L  L+
Sbjct: 618 YACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELK 677

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P  S  Y +L N++A A +W++    R  MK + V+K+PA
Sbjct: 678 PEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPA 717



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 250/582 (42%), Gaps = 86/582 (14%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   HA  L S  + D F  N L+  Y+ CG    ARR+FD+MP RD++SWNS+++++  
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL- 153

Query: 132 SGEGNAENVTEGFR--LFRSLRES--ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
                A  + +  R  L   +R    +   S +++ P   +    G+      VHG  LK
Sbjct: 154 -----ANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGF---GLGVHGLVLK 205

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
            GL     +  ALV++Y KFG +  +  +F+GM ER+ V W   +  +   G   +V  L
Sbjct: 206 TGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLAL 265

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK----LLLYNNNS------- 295
           F  +   G  P   ++  +L  + +LG      +V  Y+IK    L ++  NS       
Sbjct: 266 FRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAK 325

Query: 296 -----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            NVV WN  ++  +Q G    A    + M +     +S+T +  
Sbjct: 326 FGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNL 385

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT-------DQF 391
           L A +   +L  G+QIH  ++++G    + + N+LI+MY+K G +   ++       D  
Sbjct: 386 LPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDV 445

Query: 392 TLASVLRASSSLP---EGLHLSKQIHVHAIKNDTVA------------------------ 424
           +  +++   S  P   E L+L KQ+    I+ D ++                        
Sbjct: 446 SYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVL 505

Query: 425 -------DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                    F++  L+ +Y + G +  A  +F      D+A+WN MI GY +      A 
Sbjct: 506 VRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAF 565

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            LF  M   G   D ++    +  C    ++++GK+  ++ +    E      + ++D+ 
Sbjct: 566 HLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLL 625

Query: 538 VKCGAMVDAQSIFNDIP--APDDVAWTTMISGCVDNGEEDLA 577
            + G + ++  I  D+P  A  DV W  ++  C  +G  +LA
Sbjct: 626 GRSGQLTESVEIILDMPFHANSDV-WGALLGACRIHGNIELA 666


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 217/700 (31%), Positives = 344/700 (49%), Gaps = 68/700 (9%)

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
           V D +   A +    K G + EA  +FDGM ERDVV W  M+      GF E+   ++  
Sbjct: 35  VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 94

Query: 251 LHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA--------------------- 283
           +   G  P   ++  VL   S +     G R H   V+                      
Sbjct: 95  MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 154

Query: 284 ---YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
              Y +++    +  N V +   + G  +      A++ F  M    VQ DSV     L+
Sbjct: 155 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 214

Query: 341 AVA---GTDNLN------LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
             A   G D+L+      LG+QIH   L+ GF   + + NSL+ +Y+K            
Sbjct: 215 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAK--------NKDM 266

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS--TALID-------VYC----- 437
             A ++ A   +PE   +S  I +     +  +D  V   T + D       V C     
Sbjct: 267 NGAELIFAE--MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 324

Query: 438 ---RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
              R+G +     +F +     ++ WNAM+ GY    +  +A+  F  M     + D+ T
Sbjct: 325 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 384

Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
           ++  + +C  L  L+ GKQ+H   +++    +  + SG++ +Y +C  M  ++ IF+D  
Sbjct: 385 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 444

Query: 555 APDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQG 612
              D+A W +MISG   N  +  AL ++ +M  + V+ P+E +FA ++ + S L +L  G
Sbjct: 445 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 504

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           RQ H  ++K    SD FV  +L DMY KCG I+ A   F  +  +NTV+WN M+ G   +
Sbjct: 505 RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 564

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G G+E + L+  M + G +PD +TF+ VL+ACS++GLV    E    M+  +GIEPE++H
Sbjct: 565 GRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDH 624

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
           Y  +VD LGRAGR ++A +L  + P+++S+ +   LL +CRV GD    + VAEKLM L+
Sbjct: 625 YICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 684

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           P  S+AYVLLSN +++  QWDD  + +G M +  V K P 
Sbjct: 685 PQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 724



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 177/667 (26%), Positives = 296/667 (44%), Gaps = 82/667 (12%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAENVTEGFR 145
           D +L N L+ +Y  CG   YAR++FD+M  RD+ SWN+ L      G+ G A  V +G  
Sbjct: 6   DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMP 65

Query: 146 -------------------------LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
                                    +++ +       SR TLA +L  C           
Sbjct: 66  ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMR 125

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF-LFDGMQERDVVLWKVMLRAYAENG 239
            HG A+K GL  + FV  AL+++Y+K G I +    +F+ + + + V +  ++   A   
Sbjct: 126 CHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAREN 185

Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGV---------ISDL-GKRHEEQVQAYAIKLL 289
              E   +F  +   G+  D   +  +L +         +S++ G    +Q+   A++L 
Sbjct: 186 KVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLG 245

Query: 290 ----LYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIECFV 321
               L+ NNS                        NVV WN  + G+ Q   +  ++E   
Sbjct: 246 FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLT 305

Query: 322 NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF--YSAVIVGNSLINMYSK 379
            M  S  Q + VT +  L A   + ++  G++I  +  +     ++A++ G S    Y +
Sbjct: 306 RMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEE 365

Query: 380 MGCVCGLRTDQF-------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
              +   R  QF       T  SV+ +S +    L   KQIH   I+ +   +S + + L
Sbjct: 366 A--ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 423

Query: 433 IDVYCRNGSMAEAEYLFEN-KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL- 490
           I VY     M  +E +F++  +  D+A WN+MI G+  +    KAL LF  MH +     
Sbjct: 424 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 483

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
           +E + AT + +C  L  L  G+Q H   +KSG+  D  V + + DMY KCG +  A+  F
Sbjct: 484 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 543

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +   + V W  MI G   NG  D A+ +Y +M  SG  PD  TF  ++ A S    +E
Sbjct: 544 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 603

Query: 611 QGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLV 667
            G +I +++ ++    +P +   I +VD   + G +EDA  L +    + ++VLW  +L 
Sbjct: 604 TGLEILSSMQRIH-GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 662

Query: 668 GLAQHGN 674
               HG+
Sbjct: 663 SCRVHGD 669



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/587 (24%), Positives = 258/587 (43%), Gaps = 70/587 (11%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV-YARRLFDKMPD 116
           S+L       D + G   H   + +    + F+ N L++MY++CG +V Y  R+F+ +  
Sbjct: 109 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 168

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE------SITFTSRLTLAPLLKLCL 170
            + +S+ +++   A   +     V E  ++FR + E      S+  ++ L+++   + C 
Sbjct: 169 PNEVSYTAVIGGLARENK-----VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 223

Query: 171 SSGYVWASE---TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
           S   ++ +E    +H  AL++G   D  ++ +L+ IY+K   +  A+ +F  M E +VV 
Sbjct: 224 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 283

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
           W +M+  + +    ++       +  SG  P++ +   VLG     G     +    +I 
Sbjct: 284 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 343

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                   +V  WN  LSGY        AI  F  M   N++ D  T  V L++ A    
Sbjct: 344 ------QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF 397

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------MGC----VC 384
           L  G+QIHG  +++       + + LI +YS+                   + C    + 
Sbjct: 398 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 457

Query: 385 GLR----------------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
           G R                       ++ + A+VL + S L   LH  +Q H   +K+  
Sbjct: 458 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH-GRQFHGLVVKSGY 516

Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
           V+DSFV TAL D+YC+ G +  A   F+     +   WN MI GY  +    +A+ L+  
Sbjct: 517 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 576

Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCG 541
           M +SGE+ D IT  + + AC    +++ G ++ +   +  G E +L     I+D   + G
Sbjct: 577 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 636

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ-MRL 586
            + DA+ +    P     V W  ++S C  +G+  LA  +  + MRL
Sbjct: 637 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 683



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 10/306 (3%)

Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
           +V D +   A +   C+ G + EA  +F+     D+ +WN MI   +      KAL ++ 
Sbjct: 34  SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 93

Query: 482 HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCG 541
            M   G      T+A+ + AC  +L    G + H  A+K+G + ++ V + +L MY KCG
Sbjct: 94  RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 153

Query: 542 AMVD-AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
            +VD    +F  +  P++V++T +I G     +   A+ ++  M   GV  D    + ++
Sbjct: 154 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 213

Query: 601 KAS---------SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
             S         S +   E G+QIH   ++L    D  +  SL+++YAK  ++  A ++F
Sbjct: 214 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 273

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
            +M   N V WN M+VG  Q    +++++    M+  G +P+ VT I VL AC  +G V 
Sbjct: 274 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 333

Query: 712 EAYENF 717
                F
Sbjct: 334 TGRRIF 339



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 170/403 (42%), Gaps = 77/403 (19%)

Query: 522 GFELDLCVSSGILDMYVKC-------------------------------GAMVDAQSIF 550
           G + D  + + +LD+Y++C                               G + +A  +F
Sbjct: 2   GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61

Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
           + +P  D V+W  MIS  V  G E+ AL +Y +M   G +P  FT A ++ A S +    
Sbjct: 62  DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI-LFKQMDMRNTVLWNAMLVGL 669
            G + H   +K     + FVG +L+ MYAKCG I D  + +F+ +   N V + A++ GL
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 181

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS-ACSYTGL--VSEAYEN-----FHLMR 721
           A+     E +++F  M   GV+ DSV    +LS +    G   +SE Y N      H + 
Sbjct: 182 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 241

Query: 722 EKYGIE-----------------------------PEVE--HYSFLVDALGRAGRTKEAG 750
            + G                               PEV    ++ ++   G+  R+ ++ 
Sbjct: 242 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSV 301

Query: 751 ELILSMP---FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
           E +  M    F+ +     ++LGAC   GD ETG+ +   +   +P  S+   +LS  ++
Sbjct: 302 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP--QPSVSAWNAMLSG-YS 358

Query: 808 AANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGG 850
               +++  S   +M+ +N+K D   L          R  EGG
Sbjct: 359 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 401


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 186/534 (34%), Positives = 286/534 (53%), Gaps = 47/534 (8%)

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           A+I  YC NG + +A  LF      D+ +W++MI G   +  S +AL LF  M  SG  L
Sbjct: 186 AMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCL 245

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSI 549
               +   + A   +   + G Q+H    K G +  D  VS+ ++  Y  C  M  A  +
Sbjct: 246 SSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRV 305

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F ++     V WT +++G   N +   AL ++ +M    VVP+E +F   + +   L  +
Sbjct: 306 FGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDI 365

Query: 610 EQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGL 669
           E+G+ IHA  +K+   S  +VG SLV MY+KCG + DA  +FK ++ +N V WN+++VG 
Sbjct: 366 ERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGC 425

Query: 670 AQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPE 729
           AQHG G   L LF  M   GV+PD +T  G+LSACS++G++ +A   F    +K  +   
Sbjct: 426 AQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLT 485

Query: 730 VEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM 789
           +EHY+ +VD LGR G  +EA  +++SMP +A++ +  ALL ACR   + +  K  A ++ 
Sbjct: 486 IEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIF 545

Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
            +EP  S+AYVLLSN++A++++W +V   R +MK   V K P                  
Sbjct: 546 EIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSAD 605

Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
                A+ I+ K+E L  ++KE GYVPD  F L DVE E+KE  L YHSE+LA A+GL+S
Sbjct: 606 RSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLS 665

Query: 887 TPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           T   S I                     + ++E +   ++RFH  ++G+C C D
Sbjct: 666 TVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGD 719



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 226/504 (44%), Gaps = 55/504 (10%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           +++ Y++  ++REA  LF  +  +DVV W  +++     G       LF ++ R  +   
Sbjct: 92  MLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSW 151

Query: 260 DESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIEC 319
              V  +L     LG   E +   +A++ +    + +V  WN  + GY   G    A++ 
Sbjct: 152 TTLVDGLL----RLGIVQEAETLFWAMEPM----DRDVAAWNAMIHGYCSNGRVDDALQL 203

Query: 320 FVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
           F  M  R  + + S+        +AG D+    +Q      +    S V + + ++    
Sbjct: 204 FCQMPSRDVISWSSM--------IAGLDHNGKSEQAL-VLFRDMVASGVCLSSGVL---- 250

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIK-NDTVADSFVSTALIDVYC 437
               VCGL            A++ +P    +  QIH    K  D   D FVS +L+  Y 
Sbjct: 251 ----VCGLS-----------AAAKIP-AWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYA 294

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
               M  A  +F       +  W A++ GY L++   +ALE+F  M       +E +  +
Sbjct: 295 GCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTS 354

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A+ +C  L  +++GK +HA A+K G E    V   ++ MY KCG + DA  +F  I   +
Sbjct: 355 ALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKN 414

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---Q 614
            V+W ++I GC  +G    AL++++QM   GV PD  T   L+ A S    L++ R   +
Sbjct: 415 VVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFR 474

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHG 673
                  +  + + +   S+VD+  +CG +E+A  +   M M+ N+++W A+L    +H 
Sbjct: 475 YFGQKRSVTLTIEHYT--SMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHS 532

Query: 674 N----GEETLKLFEDMKAHGVEPD 693
           N         ++FE      +EPD
Sbjct: 533 NLDLAKRAANQIFE------IEPD 550



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 142/287 (49%), Gaps = 9/287 (3%)

Query: 421 DTVADSFVS--TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           D +    VS  T ++  Y +N  + EA  LF      D+ +WN++I G +   +   A +
Sbjct: 79  DQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARK 138

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LF  M     R   ++  T V     L ++++ + +  +AM+   + D+   + ++  Y 
Sbjct: 139 LFDEM----PRRTVVSWTTLVDGLLRLGIVQEAETLF-WAMEP-MDRDVAAWNAMIHGYC 192

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
             G + DA  +F  +P+ D ++W++MI+G   NG+ + AL ++  M  SGV         
Sbjct: 193 SNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVC 252

Query: 599 LVKASSCLTALEQGRQIHANLIKL-DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            + A++ + A   G QIH ++ KL D   D FV  SLV  YA C  +E A  +F ++  +
Sbjct: 253 GLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYK 312

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           + V+W A+L G   +    E L++F +M    V P+  +F   L++C
Sbjct: 313 SVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSC 359



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 41/335 (12%)

Query: 79  ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAE 138
           I +    P   L   ++  Y++   L  A  LF ++P +D++SWNSI+    H G+    
Sbjct: 77  IFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGD---- 132

Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSG 198
            +    +LF  +      +    +  LL+L    G V  +ET+  +A++  +  D     
Sbjct: 133 -IVTARKLFDEMPRRTVVSWTTLVDGLLRL----GIVQEAETLF-WAME-PMDRDVAAWN 185

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           A+++ Y   G++ +A  LF  M  RDV+ W  M+     NG  E+   LF D+  SG+C 
Sbjct: 186 AMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCL 245

Query: 259 DDESVQCVLGV----------------ISDLGKRH-EEQVQA-------------YAIKL 288
               + C L                  +  LG  H +E V A              A ++
Sbjct: 246 SSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRV 305

Query: 289 LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
                  +VV+W   L+GY     +  A+E F  M+R +V  +  +F  AL +  G +++
Sbjct: 306 FGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDI 365

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
             G+ IH   +K G  S   VG SL+ MYSK G V
Sbjct: 366 ERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYV 400



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 11/268 (4%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D F++ +L+T Y+ C  +  A R+F ++  + ++ W ++L  Y     G  +   E   +
Sbjct: 282 DEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGY-----GLNDKHREALEV 336

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
           F  +       +  +    L  C     +   + +H  A+K+GL    +V G+LV +YSK
Sbjct: 337 FGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSK 396

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G + +A ++F G+ E++VV W  ++   A++G G     LF  + R G+ PD  +V  +
Sbjct: 397 CGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGL 456

Query: 267 LGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
           L   S     H   +Q        +    +V L  +  +  + V    G +E    ++ S
Sbjct: 457 LSACS-----HSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMS 511

Query: 327 -NVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             ++ +S+ +L  L+A     NL+L ++
Sbjct: 512 MPMKANSMVWLALLSACRKHSNLDLAKR 539



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 123/301 (40%), Gaps = 61/301 (20%)

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR 151
           N ++  Y   G +  A +LF +MP RD+ISW+S++A   H+G+       +   LFR + 
Sbjct: 185 NAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSE-----QALVLFRDMV 239

Query: 152 ESITFTSRLTLAPLLKLCLSSGYV------------W-ASETVHGYALKIG-LVWDEFVS 197
            S              +CLSSG +            W     +H    K+G   +DEFVS
Sbjct: 240 AS-------------GVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVS 286

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
            +LV  Y+   ++  A  +F  +  + VV+W  +L  Y  N    E   +F ++ R  + 
Sbjct: 287 ASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVV 346

Query: 258 PDDESVQCVLGVISDLGKRHEEQV-QAYAIKL-------------LLYN----------- 292
           P++ S    L     L      +V  A A+K+             ++Y+           
Sbjct: 347 PNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYV 406

Query: 293 ----NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
               N  NVV WN  + G  Q G    A+  F  M+R  V  D +T    L+A + +  L
Sbjct: 407 FKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGML 466

Query: 349 N 349
            
Sbjct: 467 Q 467



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 37/190 (19%)

Query: 545 DAQSIFNDIPAP-------------------------------DDVAWTTMISGCVDNGE 573
           +A++IF+ IP P                               D V+W ++I GC+  G+
Sbjct: 73  EARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGD 132

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
              A  ++ +M    VV    ++  LV     L  +++   +   +  +D   D     +
Sbjct: 133 IVTARKLFDEMPRRTVV----SWTTLVDGLLRLGIVQEAETLFWAMEPMD--RDVAAWNA 186

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           ++  Y   G ++DA  LF QM  R+ + W++M+ GL  +G  E+ L LF DM A GV   
Sbjct: 187 MIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLS 246

Query: 694 SVTFIGVLSA 703
           S   +  LSA
Sbjct: 247 SGVLVCGLSA 256



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 13/186 (6%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           S + S L       D+  GK  HA  +        ++  +L+ MYS+CG +  A  +F  
Sbjct: 350 SSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKG 409

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSS 172
           + +++++SWNS++   A  G G          LF + LRE +     +T+  LL  C  S
Sbjct: 410 INEKNVVSWNSVIVGCAQHGCG-----MWALALFNQMLREGVD-PDGITVTGLLSACSHS 463

Query: 173 GYVWASETVHGY---ALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLW 228
           G +  +     Y      + L  + + S  +V++  + G++ EA+ +   M  + + ++W
Sbjct: 464 GMLQKARCFFRYFGQKRSVTLTIEHYTS--MVDVLGRCGELEEAEAVVMSMPMKANSMVW 521

Query: 229 KVMLRA 234
             +L A
Sbjct: 522 LALLSA 527



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
           ++  YA+   + +A  LF+++  ++ V WN+++ G    G+     KLF++M    V   
Sbjct: 92  MLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTV--- 148

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
            V++  ++      G+V EA   F  M     ++ +V  ++ ++      GR  +A +L 
Sbjct: 149 -VSWTTLVDGLLRLGIVQEAETLFWAMEP---MDRDVAAWNAMIHGYCSNGRVDDALQLF 204

Query: 754 LSMP 757
             MP
Sbjct: 205 CQMP 208


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/585 (32%), Positives = 305/585 (52%), Gaps = 46/585 (7%)

Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVN-MIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           N   + L N  ++GY +      A+  F   M    ++ DS T+   L A  G   + LG
Sbjct: 66  NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK------------------MGC-----VC---- 384
           Q IH   +K G    ++VG+SL+ MY+K                  + C      C    
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185

Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
                           G   D  T+ + + + + L + L   ++IH   + +    DSFV
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLD-LDRGREIHKELVNSGFRMDSFV 244

Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
           S AL+D+Y + G +  A  +FE      +  WN+MI GY    +    ++LF  M++ G 
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGV 304

Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
           +    T+ + + AC     L +GK +H Y +++  + D+ ++S ++D+Y KCG +  A++
Sbjct: 305 KPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAET 364

Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
           IF  +P    V+W  MISG V  G+   AL ++ +M  S V PD  TF  ++ A S L A
Sbjct: 365 IFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAA 424

Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
           LE+GR+IH  +++ +  ++  V  +L+DMYAKCG +E+A+ +FK +  R+ V W +M+  
Sbjct: 425 LEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITA 484

Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
              HG   E L+LF +M    V+PD VTF+ +LSACS+ GLV +   +F+ M   YGI P
Sbjct: 485 YGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIP 544

Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMP-FEASASMHRALLGACRVQGDTETGKWVAEK 787
            +EHYS L+  LGRAGR  EA E++ S P       +   L  ACR+  + + G  +AE 
Sbjct: 545 RIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAEN 604

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L+  +P DSS Y++LSN++A+  +WD+V   R +MK   +KK+P 
Sbjct: 605 LIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPG 649



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 153/670 (22%), Positives = 272/670 (40%), Gaps = 96/670 (14%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           + +   +LR ++++  L  GK  H +++      D ++  NL+++Y  C    YA+ +FD
Sbjct: 3   ARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFD 62

Query: 113 KMPDRDLISW-NSILAAYAHSGE-GNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC 169
            + +   IS  N ++A Y  +     A  + +    +  L+ +S T+ S      +LK C
Sbjct: 63  VIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPS------VLKAC 116

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
                V   + +H   +K GL+ D  V  +LV +Y+K  +   A  LFD M ++DV  W 
Sbjct: 117 GGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWN 176

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESV-----QCVLGVISDLGKR-HEEQVQA 283
            ++  Y ++G  EE    F  + R G  PD  ++      C   +  D G+  H+E V +
Sbjct: 177 TVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS 236

Query: 284 -----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                                   AI++     N  VV WN  ++GY   GD    I+ F
Sbjct: 237 GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLF 296

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M    V+    T    L A + +  L  G+ +HG  +++     + + +SL+++Y K 
Sbjct: 297 KRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKC 356

Query: 381 GCVCGLRT-------------------------------------------DQFTLASVL 397
           G V    T                                           D  T  SVL
Sbjct: 357 GKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVL 416

Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
            A S L   L   ++IH   ++ +   +  V  AL+D+Y + G++ EA  +F+     DL
Sbjct: 417 AACSQLA-ALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDL 475

Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----K 512
            +W +MI  Y      ++ALELF+ M  S  + D +T    + AC    ++  G     +
Sbjct: 476 VSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQ 535

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVD 570
            ++ Y +    E   C    ++ +  + G + +A  I    P   D     +T+ S C  
Sbjct: 536 MINVYGIIPRIEHYSC----LITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRL 591

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +   DL + I   + +     D  T+ IL    +     ++ R + + +  L    +P  
Sbjct: 592 HKNLDLGVEIAENL-IDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNP-- 648

Query: 631 GISLVDMYAK 640
           G S +++  K
Sbjct: 649 GCSWIEINEK 658


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 201/605 (33%), Positives = 314/605 (51%), Gaps = 66/605 (10%)

Query: 367 VIVGNSLINMYSKMGCV-CGLRT-------DQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           VI  N LI  Y + G +   +R           T  S+L A +  P     ++Q+     
Sbjct: 41  VIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP 100

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           + +TV+ +     ++  +  +  + +A   F++    D+A+WN MI          +A  
Sbjct: 101 QPNTVSYNI----MLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARR 156

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
           LFS M      +    + +   ACG L    +    +A  M+S     +   + ++  Y+
Sbjct: 157 LFSAM-PEKNCVSWSAMVSGYVACGDLDAAVEC--FYAAPMRS-----VITWTAMITGYM 208

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           K G +  A+ +F ++     V W  MI+G V+NG  +  L ++  M  +GV P+  +   
Sbjct: 209 KFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTS 268

Query: 599 LVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRN 658
           ++   S L+AL+ G+Q+H  + K   SSD   G SLV MY+KCG+++DA+ LF Q+  ++
Sbjct: 269 VLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKD 328

Query: 659 TVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFH 718
            V WNAM+ G AQHG G++ L+LF++MK  G++PD +TF+ VL AC++ GLV    + F+
Sbjct: 329 VVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFN 388

Query: 719 LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDT 778
            MR  +GIE + EHY+ +VD LGRAG+  EA +LI SMPF+   +++  LLGACR+  + 
Sbjct: 389 TMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNL 448

Query: 779 ETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------ 832
              ++ A+ L+ L+P  ++ YV L+N++AA N+WD V S R  MK  NV K P       
Sbjct: 449 NLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEI 508

Query: 833 -----------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHS 875
                              I  K++ L K++K  GYVPD +FVL DV EE KE+ L +HS
Sbjct: 509 NSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHS 568

Query: 876 EKLARAYGLISTP---PSSVI------------------LSNKEPLYAN--RFHHLRDGM 912
           EKLA A+GL+  P   P  V                   +  +E +  +  RFHH +DG 
Sbjct: 569 EKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGF 628

Query: 913 CPCAD 917
           C C D
Sbjct: 629 CSCRD 633



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 193/512 (37%), Gaps = 100/512 (19%)

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
           TH    N++ +     +N L+  Y RCG +  A R+F+ M  +  ++WNSILAA+A    
Sbjct: 31  THQHEFNNNNV---IASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKK-P 86

Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH-------GYALK 187
           G+ E   +   LF  + +  T +  + LA     C      W    VH          LK
Sbjct: 87  GHFEYARQ---LFEKIPQPNTVSYNIMLA-----CH-----WHHLGVHDARGFFDSMPLK 133

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
               W+  +S       ++ G + EA+ LF  M E++ V W  M+  Y   G        
Sbjct: 134 DVASWNTMISA-----LAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACG-------- 180

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
             DL  +  C     ++ V+   + +    +      A +L    +   +V WN  ++GY
Sbjct: 181 --DLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGY 238

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
           ++ G     +  F  M+ + V+ ++++    L   +    L LG+Q+H    K    S  
Sbjct: 239 VENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDT 298

Query: 368 IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
             G SL++MYSK    CG   D + L                                 F
Sbjct: 299 TAGTSLVSMYSK----CGDLKDAWEL---------------------------------F 321

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +     DV C                      WNAMI GY       KAL LF  M   G
Sbjct: 322 IQIPRKDVVC----------------------WNAMISGYAQHGAGKKALRLFDEMKKEG 359

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAMVDA 546
            + D IT    + AC    ++  G Q      +  G E      + ++D+  + G + +A
Sbjct: 360 LKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEA 419

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
             +   +P  P    + T++  C  +   +LA
Sbjct: 420 VDLIKSMPFKPHPAIYGTLLGACRIHKNLNLA 451



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 56/287 (19%)

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN-GEEDLALSIYHQM 584
           ++  S+ ++  YV+CG +  A  +F D+     V W ++++      G  + A  ++ ++
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 585 RLSGVV---------------------------PDEFTFAILVKASSCLTALEQGRQIHA 617
                V                            D  ++  ++ A + +  + + R++ +
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159

Query: 618 NLIKLDCSS-----------------------DPFVGI----SLVDMYAKCGNIEDAYIL 650
            + + +C S                        P   +    +++  Y K G +E A  L
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F++M MR  V WNAM+ G  ++G  E+ L+LF  M   GV+P++++   VL  CS    +
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
            +  +  H +  K  +  +    + LV    + G  K+A EL + +P
Sbjct: 280 -QLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 5/118 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L    + S L LGK  H  +       D     +L++MYS+CG L  A  LF ++P +
Sbjct: 268 SVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK 327

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D++ WN++++ YA  G G      +  RLF  +++       +T   +L  C  +G V
Sbjct: 328 DVVCWNAMISGYAQHGAGK-----KALRLFDEMKKEGLKPDWITFVAVLLACNHAGLV 380


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 200/613 (32%), Positives = 313/613 (51%), Gaps = 84/613 (13%)

Query: 385 GLRTDQFTLASVLRASS---SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGS 441
           GL  D+F+   +L+A S   SL EGL    +IH  A K    +D FV T L+ +Y   G 
Sbjct: 117 GLAVDRFSFPPLLKALSRVKSLVEGL----EIHGLAAKLGFDSDPFVQTGLVRMYAACGR 172

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +AEA  +F+     D+ TW+ MI GY  S   + AL LF  M       DE+ ++T + A
Sbjct: 173 IAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSA 232

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM------------------ 543
           CG    L  GK +H + M++   +D  + S ++ MY  CG+M                  
Sbjct: 233 CGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVAS 292

Query: 544 -------------VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
                         +A+S+FN +   D V W+ MISG  ++     AL+++++M+  G+ 
Sbjct: 293 TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+ T   ++ A + L AL+Q + IH  + K        +  +L++MYAKCG++E A  +
Sbjct: 353 PDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRI 412

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F +M  +N + W  M+   A HG+    L+ F  M+   +EP+ +TF+GVL ACS+ GLV
Sbjct: 413 FDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLV 472

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F+ M  ++ I P+  HY  +VD  GRA   +EA EL+ +MP   +  +  +L+ 
Sbjct: 473 EEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMA 532

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           ACRV G+ E G++ A++L+ L+P    A+V LSNI+A A +W+DV   R  MK K + K+
Sbjct: 533 ACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKE 592

Query: 831 P-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
                                   AD I+ K+  ++ ++K  GY P+T  +L+D+EEEEK
Sbjct: 593 RGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEK 652

Query: 868 ERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLYAN--R 904
           +  + +HSEKLA  YGL+     S I                     +  +E +  +  R
Sbjct: 653 KEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTR 712

Query: 905 FHHLRDGMCPCAD 917
           FHH +DG+C C D
Sbjct: 713 FHHYKDGVCSCKD 725



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 188/398 (47%), Gaps = 37/398 (9%)

Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR-NGSMAEAEYLFE 450
           TL S L +++SL    HL KQ+H   +++     + +   L+   C  + S+  A  +F 
Sbjct: 25  TLFSALSSATSLT---HL-KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFN 80

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                +    N  +     S    K L ++  M T G  +D  +    +KA   +  L +
Sbjct: 81  LIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE 140

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
           G ++H  A K GF+ D  V +G++ MY  CG + +A+ +F+ +   D V W+ MI G   
Sbjct: 141 GLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQ 200

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +G  + AL ++ +M+   V PDE   + ++ A      L  G+ IH  +++ +   DP +
Sbjct: 201 SGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHL 260

Query: 631 GISLVDMYAKCGN-------------------------------IEDAYILFKQMDMRNT 659
             +LV MYA CG+                               IE+A  +F QM  ++ 
Sbjct: 261 QSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDL 320

Query: 660 VLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHL 719
           V W+AM+ G A+  + +E L LF +M++ G++PD VT + V++AC++ G + +A +  HL
Sbjct: 321 VCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA-KWIHL 379

Query: 720 MREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
             +K G    +   + L++   + G  + A  +   MP
Sbjct: 380 FVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMP 417



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 129/550 (23%), Positives = 242/550 (44%), Gaps = 34/550 (6%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCG---SLVYARRLFDK 113
           FS L  A S + L   K  HA+IL S    DR  +  +  + S C    SL YA  +F+ 
Sbjct: 27  FSALSSATSLTHL---KQVHAQILRSKL--DRSTSLLVKLVISSCALSSSLDYALSVFNL 81

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +P  +    N  L   + S     E   +   ++  +R       R +  PLLK      
Sbjct: 82  IPKPETHLCNRFLRELSRS-----EEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVK 136

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +HG A K+G   D FV   LV +Y+  G+I EA+ +FD M  RDVV W +M+ 
Sbjct: 137 SLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMID 196

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
            Y ++G   +   LF ++    + PD+  +  VL      G        +Y   +  +  
Sbjct: 197 GYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGN------LSYGKMIHDFIM 250

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            +N+V+     S  + +  + G+++  +N+       + V     +   +    +   + 
Sbjct: 251 ENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARS 310

Query: 354 IHGTTLKSGF--YSAVIVG-------NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLP 404
           +    +K     +SA+I G          +N++++M  + G++ DQ T+ SV+ A + L 
Sbjct: 311 VFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSL-GIKPDQVTMLSVITACAHLG 369

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             L  +K IH+   KN       ++ ALI++Y + GS+  A  +F+     ++ +W  MI
Sbjct: 370 -ALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMI 428

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
             + +  ++  AL  F  M       + IT    + AC    ++++G+++    +     
Sbjct: 429 SAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNI 488

Query: 525 LDLCVSSG-ILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYH 582
               V  G ++D++ +   + +A  +   +P AP+ + W ++++ C  +GE  + L  + 
Sbjct: 489 TPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE--IELGEFA 546

Query: 583 QMRLSGVVPD 592
             RL  + PD
Sbjct: 547 AKRLLELDPD 556



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 26/298 (8%)

Query: 15  HTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKS 74
           H  V+  S   D Y     F+ +LL F +  +++         ++L       +L  GK 
Sbjct: 185 HRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244

Query: 75  THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH--- 131
            H  I+ ++ + D  L + L+TMY+ CGS+  A  LF+KM  ++L++  +++  Y+    
Sbjct: 245 IHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQ 304

Query: 132 -----------------------SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
                                  SG   +++  E   LF  ++       ++T+  ++  
Sbjct: 305 IENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITA 364

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C   G +  ++ +H +  K G      ++ AL+ +Y+K G +  A+ +FD M  ++V+ W
Sbjct: 365 CAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISW 424

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI 286
             M+ A+A +G        F  +    + P+  +   VL   S  G   E +   Y++
Sbjct: 425 TCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSM 482


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 301/585 (51%), Gaps = 48/585 (8%)

Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
           ++ +   LWN  + GY   G   G +E +  M+R  V+ D  TF   L A A    +  G
Sbjct: 2   HHRTTAFLWNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKG 60

Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------------------- 384
           +++HG+ +K GF S V VGN+L++ Y   G +                            
Sbjct: 61  REVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVN 120

Query: 385 -----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            GL+ +  T++S L     L E     +++H  +I+    +D F
Sbjct: 121 GWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVEL-EFFKAGREVHGSSIRMGLESDIF 179

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           ++ +LID+Y ++G   EA  +F   D  ++ +WNAMI  +  +     A+ L   M   G
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYG 239

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           E  + +T    + AC  + +++ GK++HA ++  G   DL VS+ + DMY K G +  A+
Sbjct: 240 ELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLAR 299

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
           ++F D    D+V++  +I G     +   +LS++ +M+L G+  D  +F   + A + LT
Sbjct: 300 NVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLT 358

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           A++QG++IH  L++       FV  SL+D Y KCG I  A  +F +M  ++   WN M++
Sbjct: 359 AIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMIL 418

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
           G    G  +  + LFE+M+   VE DSV+FI VLSACS+ GL+ +  + F  ++ + GIE
Sbjct: 419 GYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIE 477

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEK 787
           P   HY+ +VD LGRAG  +EA ELI  +P    A++  ALLGACR+ G+ E   W AE 
Sbjct: 478 PTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEH 537

Query: 788 LMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
           L  L+P  S  Y LLSN++A   +WD+    R  MK + VKK P 
Sbjct: 538 LFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPG 582



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 232/526 (44%), Gaps = 81/526 (15%)

Query: 227 LWKVMLRAYAENGFGE--EVFHLFVDLHRSGLCPDDESVQCVLGVISD-LGKRHEEQVQA 283
           LW  ++R Y+  G G   EV++  V   R G+ PDD +   VL   +D    R   +V  
Sbjct: 9   LWNTLIRGYSIAGVGGGLEVYNQMV---RIGVRPDDHTFPFVLKACADAFEVRKGREVHG 65

Query: 284 YAIKL-------------LLYNN---------------NSNVVLWNKKLSGYLQVGDNH- 314
             +KL               Y N                 ++V WN  + G   V   H 
Sbjct: 66  SVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMI-GVFSVNGWHY 124

Query: 315 -GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
             A++ F  MI   ++ +S+T    L  +   +    G+++HG++++ G  S + + NSL
Sbjct: 125 RDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 184

Query: 374 INMYSKMG----------------------CVCGLRTDQFTLASV-----LRASSSLPEG 406
           I+MY+K G                       +     ++F L +V     ++    LP  
Sbjct: 185 IDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNS 244

Query: 407 LHLS---------------KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
           +  +               K+IH  +I      D FVS AL D+Y ++G +  A  +F+ 
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT 304

Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
               D  ++N +I G+  +++  ++L LFS M   G + D ++   A+ AC  L  +KQG
Sbjct: 305 SLR-DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQG 363

Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
           K++H + ++  F + L V++ +LD Y KCG +  A++IF+ +   D  +W TMI G    
Sbjct: 364 KEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGML 423

Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
           GE D A+ ++  MR   V  D  +F  ++ A S    LE+GR+    L            
Sbjct: 424 GELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHY 483

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGE 676
             +VD+  + G +E+A  L K + +  +  +W A+L     +GN E
Sbjct: 484 ACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLE 529



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 258/592 (43%), Gaps = 98/592 (16%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +L+      ++  G+  H  ++      D F+ N L++ Y  CG L  A R+FD+MP++D
Sbjct: 47  VLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKD 106

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           L+SWN+++  ++ +G     +  +   +FR + +     + +T++  L + +   +  A 
Sbjct: 107 LVSWNTMIGVFSVNG----WHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAG 162

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
             VHG ++++GL  D F++ +L+++Y+K G   EA  +F  +  ++VV W  M+  +A+N
Sbjct: 163 REVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQN 222

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLL----LYNN 293
            F      L   +   G  P+  +   VL   + +G  R  +++ A +I +     L+ +
Sbjct: 223 RFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVS 282

Query: 294 NS---------------NV--------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
           N+               NV        V +N  + G+ Q  D   ++  F  M    ++ 
Sbjct: 283 NALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQ 342

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           D+V+F+ AL+A A    +  G++IHG  L+  F+  + V NSL++ Y+K G + GL  + 
Sbjct: 343 DNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRI-GLARNI 401

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
           F                          + N  VA       +I  Y   G +  A  LFE
Sbjct: 402 FD------------------------RMTNKDVAS---WNTMILGYGMLGELDTAIDLFE 434

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
           N    D+  ++++ F  +LS  SH  L     +    +  DE+      KA G      +
Sbjct: 435 NMRKDDV-EYDSVSFIAVLSACSHGGL-----LEKGRKYFDEL------KARGI-----E 477

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
             QMH   M              +D+  + G M +A  +   +P  PD   W  ++  C 
Sbjct: 478 PTQMHYACM--------------VDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACR 523

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
             G  +L L+ +    L  + P+   +  L+   S + A E GR   AN I+
Sbjct: 524 IYG--NLELAAWAAEHLFELKPEHSGYYTLL---SNMYA-ETGRWDEANRIR 569


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 203/613 (33%), Positives = 308/613 (50%), Gaps = 83/613 (13%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
           G   D+F+   +L+A S L   L+L  +IH  A K     AD F+ +ALI +Y   G + 
Sbjct: 110 GFPLDRFSFPPLLKAVSKL-SALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIM 168

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSHMHTSGERLDEITIATAVKA 501
           +A +LF+     D+ TWN MI GY  S N+H    L+L+  M TSG   D I + T + A
Sbjct: 169 DARFLFDKMSHRDVVTWNIMIDGY--SQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSA 226

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA------ 555
           C     L  GK +H +   +GF +   + + +++MY  CGAM  A+ +++ +P+      
Sbjct: 227 CAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVS 286

Query: 556 -------------------------PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
                                     D V W+ MISG  ++ +   AL ++++M+   +V
Sbjct: 287 TAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIV 346

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           PD+ T   ++ A + + AL Q + IH    K        +  +L+DMYAKCGN+  A  +
Sbjct: 347 PDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREV 406

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F+ M  +N + W++M+   A HG+ +  + LF  MK   +EP+ VTFIGVL ACS+ GLV
Sbjct: 407 FENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLV 466

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  + F  M  ++ I P+ EHY  +VD   RA   ++A ELI +MPF  +  +  +L+ 
Sbjct: 467 EEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMS 526

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
           AC+  G+ E G++ A +L+ LEP    A V+LSNI+A   +WDDV   R  MK K V K+
Sbjct: 527 ACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKE 586

Query: 831 PA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEK 867
            A                       D I+ K++ ++ ++K  GY P T  +L+D+EEEEK
Sbjct: 587 KACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEK 646

Query: 868 ERALYYHSEKLARAYGLISTPPSSVILSNK-----EPLYA------------------NR 904
           +  + +HSEKLA  YGLI     S I   K     E  ++                   R
Sbjct: 647 KEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTR 706

Query: 905 FHHLRDGMCPCAD 917
           FHH   G+C C D
Sbjct: 707 FHHFNGGICSCRD 719



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 236/506 (46%), Gaps = 66/506 (13%)

Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------GVISDLG 274
           +LR ++     E    L++ L R+G   D  S   +L                G+ S  G
Sbjct: 86  LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFG 145

Query: 275 KRHEEQ-VQAYAIKL-----------LLYNNNS--NVVLWNKKLSGYLQVGDNHGAIECF 320
             H +  +Q+  I +            L++  S  +VV WN  + GY Q       ++ +
Sbjct: 146 FFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLY 205

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
             M  S  + D++     L+A A   NL+ G+ IH     +GF     +  SL+NMY+  
Sbjct: 206 EEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANC 265

Query: 381 GCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
           G                         +HL+++++        V    VSTA++  Y + G
Sbjct: 266 G------------------------AMHLAREVYDQLPSKHMV----VSTAMLSGYAKLG 297

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
            + +A ++F+     DL  W+AMI GY  S    +AL+LF+ M       D+IT+ + + 
Sbjct: 298 MVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVIS 357

Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
           AC  +  L Q K +H YA K+GF   L +++ ++DMY KCG +V A+ +F ++P  + ++
Sbjct: 358 ACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVIS 417

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W++MI+    +G+ D A++++H+M+   + P+  TF  ++ A S    +E+G++  +++I
Sbjct: 418 WSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMI 477

Query: 621 ---KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGE 676
              ++    + +    +VD+Y +  ++  A  L + M    N ++W +++     HG  E
Sbjct: 478 NEHRISPQREHYG--CMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIE 535

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLS 702
             L  F   +   +EPD    + VLS
Sbjct: 536 --LGEFAATRLLELEPDHDGALVVLS 559



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 162/387 (41%), Gaps = 78/387 (20%)

Query: 87  DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
           D F+ + L+ MY+ CG ++ AR LFDKM  RD+++WN ++  Y+ +      +     +L
Sbjct: 150 DPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNA-----HYDHVLKL 204

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY-- 204
           +  ++ S T    + L  +L  C  +G +   + +H +    G      +  +LVN+Y  
Sbjct: 205 YEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYAN 264

Query: 205 -----------------------------SKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
                                        +K G +++A+F+FD M E+D+V W  M+  Y
Sbjct: 265 CGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGY 324

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIK-----LL 289
           AE+    E   LF ++ R  + PD  ++  V+   +++G   + + +  YA K      L
Sbjct: 325 AESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTL 384

Query: 290 LYNN-----------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
             NN                         NV+ W+  ++ +   GD   AI  F  M   
Sbjct: 385 PINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQ 444

Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGL 386
           N++ + VTF+  L A +    +  GQ+         F+S++I  + +       GC+   
Sbjct: 445 NIEPNGVTFIGVLYACSHAGLVEEGQK---------FFSSMINEHRISPQREHYGCM--- 492

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQI 413
             D +  A+ LR +  L E +     +
Sbjct: 493 -VDLYCRANHLRKAMELIETMPFPPNV 518



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 122/557 (21%), Positives = 207/557 (37%), Gaps = 137/557 (24%)

Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
           +L YA  LF  +P+      N +L  ++       EN      L+  LR +     R + 
Sbjct: 64  ALDYALSLFSHIPNPPTRFSNQLLRQFSRGP--TPENT---LSLYLHLRRNGFPLDRFSF 118

Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVW-DEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
            PLLK       +     +HG A K G    D F+  AL+ +Y+  G+I +A+FLFD M 
Sbjct: 119 PPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMS 178

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV------------ 269
            RDVV W +M+  Y++N   + V  L+ ++  SG  PD   +  VL              
Sbjct: 179 HRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKA 238

Query: 270 ----ISDLGKRHEEQVQAYAIKLL-----------LYNN--NSNVVLWNKKLSGYLQVG- 311
               I D G R    +Q   + +            +Y+   + ++V+    LSGY ++G 
Sbjct: 239 IHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGM 298

Query: 312 ------------------------------DNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
                                             A++ F  M R  +  D +T L  ++A
Sbjct: 299 VQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISA 358

Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
            A    L   + IH    K+GF   + + N+LI+MY+K G +   R              
Sbjct: 359 CANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKARE------------- 405

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
                            +N    +    +++I+ +  +G    A  LF      ++   N
Sbjct: 406 ---------------VFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEP-N 449

Query: 462 AMIFGYILSNNSHKAL-----ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA 516
            + F  +L   SH  L     + FS M      ++E  I+   +  GC+           
Sbjct: 450 GVTFIGVLYACSHAGLVEEGQKFFSSM------INEHRISPQREHYGCM----------- 492

Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNGEED 575
                            +D+Y +   +  A  +   +P P +V  W +++S C ++GE  
Sbjct: 493 -----------------VDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGE-- 533

Query: 576 LALSIYHQMRLSGVVPD 592
           + L  +   RL  + PD
Sbjct: 534 IELGEFAATRLLELEPD 550



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 105/199 (52%), Gaps = 7/199 (3%)

Query: 84  QIPDRFL--TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           Q+P + +  +  +++ Y++ G +  AR +FD+M ++DL+ W+++++ YA S +       
Sbjct: 277 QLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQP-----L 331

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
           E  +LF  ++       ++T+  ++  C + G +  ++ +H YA K G      ++ AL+
Sbjct: 332 EALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALI 391

Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
           ++Y+K G + +A+ +F+ M  ++V+ W  M+ A+A +G  +    LF  +    + P+  
Sbjct: 392 DMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGV 451

Query: 262 SVQCVLGVISDLGKRHEEQ 280
           +   VL   S  G   E Q
Sbjct: 452 TFIGVLYACSHAGLVEEGQ 470


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 240/820 (29%), Positives = 390/820 (47%), Gaps = 85/820 (10%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           M DR   SWN  +A YA +G     +      +FR++        R++   +L    S G
Sbjct: 1   MADRSPFSWNLAIAEYARNG-----HHARALEIFRAMALEGVAPDRVSCIAILDAFASLG 55

Query: 174 YVWASETVHGYALKI-GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
            +   E  H    +  GL  D  V+ A++ +Y++ G +  A+  FD M  R+VV W  M+
Sbjct: 56  DLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMI 115

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIK 287
            AYA+ G   +   LFV +   G+  +  +   VL   +      LGK   E++ A  + 
Sbjct: 116 AAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLL 175

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
                   +V+L N  ++ Y + G+   A E F  M   N    +VT+   +AA +  D 
Sbjct: 176 ------GDDVILGNTIVNMYGKCGEVDLAREVFERMEAKN----AVTWNTMIAACSRHDR 225

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
                       K  F    ++G   ++         GLR ++ TL SV+ A + + + +
Sbjct: 226 -----------YKEAF---ALLGEMDLD---------GLRPNKITLVSVIDACAWM-QSI 261

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
              + +H         +D+ V+ AL+++Y + G +  A +  E  +  D  +W  ++  Y
Sbjct: 262 VRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAY 321

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
               +  +A+ +   M   G +LD  T    +++C  +  L  G+++H    +SG ELD 
Sbjct: 322 ARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDP 381

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCV--DNGEEDLALSIYHQM 584
            + + ++DMY KCG    A+  F+ +    DV  W  +++  V  D G+E   L I+ +M
Sbjct: 382 VLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKE--TLGIFARM 439

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI------KLDCSSDPFVGISLVDMY 638
            L GV PD  TF  ++ A + L AL  GR  H+ ++      +   +S   +  S+++MY
Sbjct: 440 SLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMY 499

Query: 639 AKCGNIEDAYILF---KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
           AKCG++ DA   F   ++    + V W+AM+   +Q G  EE L+ F  M+  GV+PDSV
Sbjct: 500 AKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSV 559

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
           +F+  ++ CS++GLV EA   F  +R  +GI P   H++ LVD L RAG  +EA  L+  
Sbjct: 560 SFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRR 619

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
            P  A  S    LL ACR  GD E  + VA +L +L     SAY LL+++F  + +WDDV
Sbjct: 620 APLGAHHSTWMTLLSACRTYGDLERARRVAARLASLRS--GSAYSLLASVFCLSRKWDDV 677

Query: 816 TSARGEMKRKNVKKDPA------------------------DLIFAKVEGLIKRIKEGGY 851
            +AR  +  +     P                         + IFA++E L   I++ GY
Sbjct: 678 RNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGY 737

Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
             D    + D  E+EK+  L YHSEK+A  +GLISTP  +
Sbjct: 738 ERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGT 777



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 137/611 (22%), Positives = 253/611 (41%), Gaps = 108/611 (17%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQI-PDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
            +IL    S  DL  G+  H  +  +S +  D  +   ++TMY+RCGS+ +ARR FD M 
Sbjct: 45  IAILDAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMV 104

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
            R+++SW++++AAYA  G        +   LF  +       + +T   +L  C S   +
Sbjct: 105 VRNVVSWSAMIAAYAQRGHPG-----DALELFVRMDHEGVKANAITFVSVLDACASMRAI 159

Query: 176 WASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
              +++H   +  GL+ D+ + G  +VN+Y K G++  A+ +F+ M+ ++ V W  M+ A
Sbjct: 160 ALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAA 219

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL----------------------GVISD 272
            + +   +E F L  ++   GL P+  ++  V+                      G+ SD
Sbjct: 220 CSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESD 279

Query: 273 ----------LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVN 322
                      GK  + +   +A++ +      + + W   L+ Y + G    AI     
Sbjct: 280 NTVANALVNLYGKCGKLRAARHALEGI---ETRDKISWTTLLAAYARHGHGKRAIAVIKR 336

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG- 381
           M    V+ DS TF+  L +      L LG++IH    +SG     ++  +L++MY K G 
Sbjct: 337 MDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGN 396

Query: 382 -------------------------------------------CVCGLRTDQFTLASVLR 398
                                                       + G+  D  T  S+L 
Sbjct: 397 PDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILD 456

Query: 399 ASSSLPEGLHLSKQIHVHAI------KNDTVADSFVSTALIDVYCRNGSMAEAEYLF--- 449
           A +SL   L L +  H   +      +    +   ++T++I++Y + GS+A+A+  F   
Sbjct: 457 ACASLA-ALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKA 515

Query: 450 ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLK 509
                 D+  W+AM+  Y     S +AL  F  M   G + D ++  +A+  C       
Sbjct: 516 RRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCS-----H 570

Query: 510 QGKQMHAYAMKSGFELDLCVS------SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
            G    A A  +    D  ++      + ++D+  + G + +A+++    P       W 
Sbjct: 571 SGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWM 630

Query: 563 TMISGCVDNGE 573
           T++S C   G+
Sbjct: 631 TLLSACRTYGD 641


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 206/727 (28%), Positives = 354/727 (48%), Gaps = 101/727 (13%)

Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
           A++L    N ++  LWN  + G+   G    A++ +  M+ + V+ D+ T+   + +VAG
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
             +L  G++IH   +K GF S V V NSLI++Y K+GC                      
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202

Query: 384 ----------------------CGLRTDQFTLASVLRASSSL--PEGLHLSKQIHVHAIK 419
                                 CG + D+F+  S L A S +  P+   + K+IH HA++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK---MGKEIHCHAVR 259

Query: 420 NDT-VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
           +     D  V T+++D+Y + G ++ AE +F      ++  WN MI  Y  +     A  
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319

Query: 479 LFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
            F  M   +G + D IT    + A   L    +G+ +H YAM+ GF   + + + ++DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
            +CG +  A+ IF+ +   + ++W ++I+  V NG+   AL ++ ++  S +VPD  T A
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435

Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
            ++ A +   +L +GR+IHA ++K    S+  +  SLV MYA CG++EDA   F  + ++
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495

Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
           + V WN++++  A HG G  ++ LF +M A  V P+  TF  +L+ACS +G+V E +E F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555

Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
             M+ +YGI+P +EHY  ++D +GR G    A   +  MPF  +A +  +LL A R   D
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615

Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-DLIF 836
               ++ AE++  +E  ++  YVLL N++A A +W+DV   +  M+ K + +  +   + 
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675

Query: 837 AKVEGLIKRIKEGGYVPDTD-FVLLDV------EEE----------------EKERALYY 873
           AK +  +    +  +V     + +LDV      EE+                 +  +   
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRR 735

Query: 874 HSEKLARAYGLISTPPSSVI---------------------LSNKEPLYANR--FHHLRD 910
           HS +LA  +GLIST     +                     L+ +E +  +   FHH  +
Sbjct: 736 HSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSN 795

Query: 911 GMCPCAD 917
           G C C +
Sbjct: 796 GRCSCGN 802



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/555 (22%), Positives = 242/555 (43%), Gaps = 107/555 (19%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +++     S L  GK  HA ++    + D ++ N+L+++Y + G    A ++F++MP+RD
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           ++SWNS+++ Y   G+G +        LF+ + +      R +    L  C         
Sbjct: 196 IVSWNSMISGYLALGDGFS-----SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250

Query: 179 ETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           + +H +A++  +   D  V  +++++YSK+G++  A+ +F+GM +R++V W VM+  YA 
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310

Query: 238 NGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK--------- 287
           NG   + F  F  +  ++GL PD  +   +L   + L  R    +  YA++         
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR---TIHGYAMRRGFLPHMVL 367

Query: 288 ----LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
               + +Y                   NV+ WN  ++ Y+Q G N+ A+E F  +  S++
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427

Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
             DS T    L A A + +L+ G++IH   +KS ++S  I+ NSL++MY+    +CG   
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA----MCG--- 480

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
                             L  +++   H +  D V                         
Sbjct: 481 -----------------DLEDARKCFNHILLKDVV------------------------- 498

Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
                     +WN++I  Y +      ++ LFS M  S    ++ T A+ + AC    M+
Sbjct: 499 ----------SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548

Query: 509 KQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
            +G +        Y +  G E   C    +LD+  + G    A+    ++P  P    W 
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGC----MLDLIGRTGNFSAAKRFLEEMPFVPTARIWG 604

Query: 563 TMISGCVDNGEEDLA 577
           ++++   ++ +  +A
Sbjct: 605 SLLNASRNHKDITIA 619



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           SIL     +  L  G+  HA I+ S    +  + N+L+ MY+ CG L  AR+ F+ +  +
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           D++SWNSI+ AYA  G G          LF  +  S    ++ T A LL  C  SG V
Sbjct: 496 DVVSWNSIIMAYAVHGFGRI-----SVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 216/722 (29%), Positives = 339/722 (46%), Gaps = 92/722 (12%)

Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
           +A K+       +V  WN  + GY + G    A++ +  M+ +  + D  TF   L +  
Sbjct: 147 HAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCG 206

Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG---------------------- 381
           G  +L +G+++H   L+ G    V V N+L+ MY+K G                      
Sbjct: 207 GVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNA 266

Query: 382 ----------CVCGLR-----------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKN 420
                     C  GL             +  T+ SV  AS  L + L  +K+IH  A+K 
Sbjct: 267 MIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD-LDFAKEIHALAVKR 325

Query: 421 DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
               D     +LI +Y   G M EA  +F   +  D  +W AMI GY  +    KALE++
Sbjct: 326 GFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY 385

Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
           + M  +    D++T+A+A+ AC  L  L  G ++H  A   GF   + V++ +++MY K 
Sbjct: 386 ALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKS 445

Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
             +  A  +F  +P  D ++W++MI+G   N +   AL  +  M L+ V P+  TF   +
Sbjct: 446 KIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAAL 504

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A +   +L  G++IHA++++   +S+ +V  +L+D+Y KCG    A+  F     ++ V
Sbjct: 505 AACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVV 564

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            WN ML G   HG+G+  L  F +M   G  PD VTF+ +L  CS  G+VS+ +E FH M
Sbjct: 565 SWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSM 624

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
            EKY I P ++HY+ +VD L R GR  E    I  MP    A++  ALL  CR+  + E 
Sbjct: 625 TEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIEL 684

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD---------- 830
           G+  A+ ++ LEP D+  +VLLS+++A A  W +V+  R  M+ K ++ D          
Sbjct: 685 GELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKG 744

Query: 831 -------------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                            I   ++G+ +R+K  G+ P   + L D +E  K+  L  HSE+
Sbjct: 745 AIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLED-KEVSKDDVLCGHSER 803

Query: 878 LARAYGLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCP 914
           LA A+GLI+T P + I   K                              FHH RDG C 
Sbjct: 804 LAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCS 863

Query: 915 CA 916
           C 
Sbjct: 864 CG 865



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 157/620 (25%), Positives = 265/620 (42%), Gaps = 100/620 (16%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N +++M  R G   +A ++F KMP+RD+ SWN ++  Y     G A  + E   L+  
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGY-----GKAGFLEEALDLYHR 185

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +  +       T   +L+ C     +     VH + L+ GL  +  V  ALV +Y+K G 
Sbjct: 186 MLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGD 245

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD---DESVQCV 266
           +  A+ +FDGM   D + W  M+  + EN   E    LF+ +    + P+     SV   
Sbjct: 246 VEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA 305

Query: 267 LGVISDLGKRHEEQVQAYAIK-------------LLLYNN---------------NSNVV 298
            G++SDL     +++ A A+K             + +Y++                 + +
Sbjct: 306 SGLLSDL--DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAM 363

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W   +SGY + G    A+E +  M  +NV  D VT   ALAA A    L++G ++H   
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELA 423

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
              GF   ++V N+L+ MY+K   +                           K I V   
Sbjct: 424 TSKGFIRYIVVANALVEMYAKSKII--------------------------EKAIEVFKY 457

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
             D   D    +++I  +C N                               + + +AL 
Sbjct: 458 MPDK--DVISWSSMIAGFCFN-------------------------------HKNFEALY 484

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYV 538
            F HM  +  + + +T   A+ AC     L+ GK++HA+ ++ G   +  V + +LD+YV
Sbjct: 485 YFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYV 543

Query: 539 KCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAI 598
           KCG    A + F      D V+W  M++G V +G  D+ALS +++M  +G  PDE TF  
Sbjct: 544 KCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVA 603

Query: 599 LVKASSCLTALEQGRQI-HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
           L+   S    + QG ++ H+   K     +      +VD+ ++ G + + Y    +M + 
Sbjct: 604 LLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPIT 663

Query: 658 -NTVLWNAMLVGLAQHGNGE 676
            +  +W A+L G   H N E
Sbjct: 664 PDAAVWGALLNGCRIHRNIE 683



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 239/545 (43%), Gaps = 104/545 (19%)

Query: 59  ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           +LR      DL +G+  HA +L      +  + N L+TMY++CG +  AR++FD M   D
Sbjct: 201 VLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTD 260

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV--- 175
            ISWN+++A +  + E  A     G  LF  + E     + +T+     + ++SG +   
Sbjct: 261 CISWNAMIAGHFENHECEA-----GLELFLHMLEDEVEPNLMTIT---SVTVASGLLSDL 312

Query: 176 -WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
            +A E +H  A+K G   D     +L+ +YS  G++ EA  +F  M+ RD + W  M+  
Sbjct: 313 DFAKE-IHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISG 371

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG------KRHE---------- 278
           Y +NGF ++   ++  +  + + PDD +V   L   + LG      K HE          
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431

Query: 279 -------------EQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                         ++   AI++  Y  + +V+ W+  ++G+     N  A+  F +M+ 
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML- 490

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
           ++V+ +SVTF+ ALAA A T +L  G++IH   L+ G  S   V N+L+++Y K G   G
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQT-G 549

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
               QF              G H +K +    +  + +   FV+    D+          
Sbjct: 550 YAWAQF--------------GAHGTKDV----VSWNIMLAGFVAHGHGDI---------- 581

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
                      L+ +N M+                     +GE  DE+T    +  C   
Sbjct: 582 ----------ALSFFNEML--------------------ETGEHPDEVTFVALLCGCSRA 611

Query: 506 LMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTT 563
            M+ QG ++ H+   K     +L   + ++D+  + G + +  +  N +P  PD   W  
Sbjct: 612 GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGA 671

Query: 564 MISGC 568
           +++GC
Sbjct: 672 LLNGC 676



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 145/269 (53%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  A++ +  R G    A  +F      D+ +WN M+ GY  +    +AL+L+  M  +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R D  T    +++CG +  L  G+++HA+ ++ G  +++ V + ++ MY KCG +  A+
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +   D ++W  MI+G  +N E +  L ++  M    V P+  T   +  AS  L+
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
            L+  ++IHA  +K   ++D     SL+ MY+  G + +A  +F +M+ R+ + W AM+ 
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           G  ++G  ++ L+++  M+ + V PD VT
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVT 399



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 18/254 (7%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            ++ACG           HA A    F L L   + +L M V+ G    A  +F  +P  D
Sbjct: 113 GLRACG-----------HADAAHGTFGLRL--GNAMLSMLVRFGETWHAWKVFAKMPERD 159

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
             +W  M+ G    G  + AL +YH+M  +G  PD +TF  ++++   +  L  GR++HA
Sbjct: 160 VFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHA 219

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           ++++     +  V  +LV MYAKCG++E A  +F  M + + + WNAM+ G  ++   E 
Sbjct: 220 HVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEA 279

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA--YENFHLMREKYGIEPEVEHYSF 735
            L+LF  M    VEP+ +T   V  A   +GL+S+    +  H +  K G   +V   + 
Sbjct: 280 GLELFLHMLEDEVEPNLMTITSVTVA---SGLLSDLDFAKEIHALAVKRGFATDVAFCNS 336

Query: 736 LVDALGRAGRTKEA 749
           L+      GR  EA
Sbjct: 337 LIQMYSSLGRMGEA 350


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 229/767 (29%), Positives = 343/767 (44%), Gaps = 165/767 (21%)

Query: 199 ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP 258
           A+V  Y +  + REA  LF+ M +R+ V W  ++  + +NG   E   +F  +      P
Sbjct: 60  AMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTM------P 113

Query: 259 DDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIE 318
           D                                    NVV W   + GY++ GD   A  
Sbjct: 114 D-----------------------------------RNVVSWTSMVRGYVRNGDVAEAER 138

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
            F +M   NV    V++ V L  +     ++  +++     +      V+   ++I  Y 
Sbjct: 139 LFWHMPHKNV----VSWTVMLGGLLQEGRVDDARKLFDMMPEKD----VVAVTNMIGGYC 190

Query: 379 KMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYC 437
           + G     R D+                          A+ ++    + V+ TA++  Y 
Sbjct: 191 EEG-----RLDE------------------------ARALFDEMPKRNVVTWTAMVSGYA 221

Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIAT 497
           RNG +  A  LFE     +  +W AM+ GY  S    +A  LF  M              
Sbjct: 222 RNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVK----------- 270

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
            V  C  ++M              GF L+              G +  A+ +F  +   D
Sbjct: 271 PVVVCNEMIM--------------GFGLN--------------GEVDKARRVFKGMKERD 302

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           +  W+ MI      G E  AL ++ +M+  G+  +  +   ++     L +L+ G+Q+HA
Sbjct: 303 NGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHA 362

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            L++ +   D +V   L+ MY KCGN+  A  +F +  +++ V+WN+M+ G +QHG GEE
Sbjct: 363 QLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEE 422

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L +F DM + GV PD VTFIGVLSACSY+G V E  E F  M+ KY +EP +EHY+ LV
Sbjct: 423 ALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLV 482

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGRA +  EA +L+  MP E  A +  ALLGACR     +  +   EKL  LEP ++ 
Sbjct: 483 DLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAG 542

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------------D 833
            YVLLSN++A   +W DV   R ++K ++V K P                          
Sbjct: 543 PYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQP 602

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PS 890
           +I   +E L   ++E GY PD  FVL DV+EEEK  +L YHSEKLA AYGL+  P   P 
Sbjct: 603 IIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPI 662

Query: 891 SVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            V+                  ++ +E +   ANRFHH +DG C C D
Sbjct: 663 RVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKD 709



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 253/584 (43%), Gaps = 104/584 (17%)

Query: 98  YSRCGSLVYARRLFDK--MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESIT 155
           Y+R G L +AR++FD+  +P R + SWN+++AAY       A    E   LF  + +  T
Sbjct: 32  YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYF-----EARQPREALLLFEKMPQRNT 86

Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
            +                                  W+  +SG + N     G + EA+ 
Sbjct: 87  VS----------------------------------WNGLISGHIKN-----GMLSEARR 107

Query: 216 LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK 275
           +FD M +R+VV W  M+R Y  NG   E   LF  +    +     S   +LG +   G+
Sbjct: 108 VFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV----SWTVMLGGLLQEGR 163

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
             +      A KL       +VV     + GY + G    A   F  M + NV    VT+
Sbjct: 164 VDD------ARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV----VTW 213

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSG--FYSAVIVGNSLINMYSKMGCVCGLRTDQFTL 393
              ++  A    +++ +++     +     ++A+++G                    +T 
Sbjct: 214 TAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLG--------------------YTH 253

Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
           +  +R +SSL + +               V    V   +I  +  NG + +A  +F+   
Sbjct: 254 SGRMREASSLFDAM--------------PVKPVVVCNEMIMGFGLNGEVDKARRVFKGMK 299

Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
             D  TW+AMI  Y       +AL LF  M   G  L+  ++ + +  C  L  L  GKQ
Sbjct: 300 ERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQ 359

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +HA  ++S F+ DL V+S ++ MYVKCG +V A+ +FN  P  D V W +MI+G   +G 
Sbjct: 360 VHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGL 419

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            + AL+++H M  SGV PD+ TF  ++ A S    +++G ++      + C      GI 
Sbjct: 420 GEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFET---MKCKYQVEPGIE 476

Query: 634 ----LVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQH 672
               LVD+  +   + +A  L ++M M  + ++W A+L     H
Sbjct: 477 HYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTH 520



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 52/339 (15%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQI------PDRFLTNNLMTMYSRCGSLVYARR 109
           W    ++ +S + +L G     R+ ++ ++       D     N++  Y   G L  AR 
Sbjct: 141 WHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARA 200

Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLK 167
           LFD+MP R++++W ++++ YA +G+     V    +LF  +  R  +++T     A LL 
Sbjct: 201 LFDEMPKRNVVTWTAMVSGYARNGK-----VDVARKLFEVMPERNEVSWT-----AMLLG 250

Query: 168 LCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
              S     AS       +K  +V +E + G  +N     G++ +A+ +F GM+ERD   
Sbjct: 251 YTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLN-----GEVDKARRVFKGMKERDNGT 305

Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAI 286
           W  M++ Y   G+  E   LF  + R GL  +  S+  VL V   L    H +QV A  +
Sbjct: 306 WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLV 365

Query: 287 K-------------LLLYNNNSN---------------VVLWNKKLSGYLQVGDNHGAIE 318
           +             + +Y    N               VV+WN  ++GY Q G    A+ 
Sbjct: 366 RSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALN 425

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
            F +M  S V  D VTF+  L+A + +  +  G ++  T
Sbjct: 426 VFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFET 464



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 206/525 (39%), Gaps = 109/525 (20%)

Query: 84  QIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT 141
           ++P R     N L++ + + G L  ARR+FD MPDR+++SW S++  Y  +G     +V 
Sbjct: 80  KMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNG-----DVA 134

Query: 142 EGFRLFRSLRESITFTSRLTLAPLLK------------LCLSSGYVWASETVHGYALKIG 189
           E  RLF  +      +  + L  LL+            +      V  +  + GY  +  
Sbjct: 135 EAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGR 194

Query: 190 L-----VWDEFVS------GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
           L     ++DE          A+V+ Y++ GK+  A+ LF+ M ER+ V W  ML  Y  +
Sbjct: 195 LDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHS 254

Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
           G   E   LF  +      P    V C   +I   G   E        K +   +N    
Sbjct: 255 GRMREASSLFDAM------PVKPVVVCN-EMIMGFGLNGEVDKARRVFKGMKERDNGT-- 305

Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTT 358
            W+  +  Y + G    A+  F  M R  +  +  + +  L+      +L+ G+Q+H   
Sbjct: 306 -WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQL 364

Query: 359 LKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAI 418
           ++S F   + V + LI MY K G             +++RA           KQ+     
Sbjct: 365 VRSEFDQDLYVASVLITMYVKCG-------------NLVRA-----------KQV----- 395

Query: 419 KNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
                   F    L DV   N                      +MI GY       +AL 
Sbjct: 396 --------FNRFPLKDVVMWN----------------------SMITGYSQHGLGEEALN 425

Query: 479 LFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH-----AYAMKSGFELDLCVSSGI 533
           +F  M +SG   D++T    + AC     +K+G ++       Y ++ G E   C    +
Sbjct: 426 VFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYAC----L 481

Query: 534 LDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
           +D+  +   + +A  +   +P  PD + W  ++  C  + + DLA
Sbjct: 482 VDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLA 526



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 68/321 (21%)

Query: 23  FTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL--RHAISTSDLLLGKSTHARIL 80
           F    ++N+ S+++ L   LQ+     +    + F ++  +  ++ ++++ G     R+ 
Sbjct: 140 FWHMPHKNVVSWTVMLGGLLQEGRVDDAR---KLFDMMPEKDVVAVTNMIGGYCEEGRLD 196

Query: 81  NSSQIPDRFLTNNLMTM------YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
            +  + D     N++T       Y+R G +  AR+LF+ MP+R+ +SW ++L  Y HSG 
Sbjct: 197 EARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGR 256

Query: 135 --------------------------GNAENVTEGFRLFRSLR----------------- 151
                                     G    V +  R+F+ ++                 
Sbjct: 257 MREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERK 316

Query: 152 ----ESITFTSRL----------TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
               E++    R+          +L  +L +C+S   +   + VH   ++     D +V+
Sbjct: 317 GYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVA 376

Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
             L+ +Y K G +  AK +F+    +DVV+W  M+  Y+++G GEE  ++F D+  SG+ 
Sbjct: 377 SVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVP 436

Query: 258 PDDESVQCVLGVISDLGKRHE 278
           PDD +   VL   S  GK  E
Sbjct: 437 PDDVTFIGVLSACSYSGKVKE 457



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 15/184 (8%)

Query: 57  FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
            S+L   +S + L  GK  HA+++ S    D ++ + L+TMY +CG+LV A+++F++ P 
Sbjct: 342 ISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPL 401

Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
           +D++ WNS++  Y+  G G      E   +F  +  S      +T   +L  C  SG V 
Sbjct: 402 KDVVMWNSMITGYSQHGLGE-----EALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVK 456

Query: 177 AS----ETVH-GYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKV 230
                 ET+   Y ++ G+  + +    LV++  +  ++ EA  L + M  E D ++W  
Sbjct: 457 EGLELFETMKCKYQVEPGI--EHY--ACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGA 512

Query: 231 MLRA 234
           +L A
Sbjct: 513 LLGA 516



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 20/211 (9%)

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEE 677
           ++L C++     I+    YA+ G ++ A  +F +  +  R    WNAM+    +     E
Sbjct: 17  VRLQCTTSSSYAIAC---YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPRE 73

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L LFE M     + ++V++ G++S     G++SEA   F  M ++      V  ++ +V
Sbjct: 74  ALLLFEKMP----QRNTVSWNGLISGHIKNGMLSEARRVFDTMPDR-----NVVSWTSMV 124

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP-FDS 796
               R G   EA  L   MP +   S    +LG    +G  +     A KL  + P  D 
Sbjct: 125 RGYVRNGDVAEAERLFWHMPHKNVVSW-TVMLGGLLQEGRVDD----ARKLFDMMPEKDV 179

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
            A   +   +    + D+  +   EM ++NV
Sbjct: 180 VAVTNMIGGYCEEGRLDEARALFDEMPKRNV 210


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 186/586 (31%), Positives = 304/586 (51%), Gaps = 64/586 (10%)

Query: 387 RTDQFTLASVLR---ASSSLPEGLHLSKQIHVHA-IKNDTVADSFVSTALIDVYCRNGSM 442
           R D  +L  +++      +   G  + + +  H  + +D     FVS +L  +Y + G +
Sbjct: 61  RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120

Query: 443 AEAEYLFENKDGFDLATWNAMIFGYILSN-NSHKALELFSHMHTSGERLDEITIATAVKA 501
            +A  +F+     ++ TW  ++     ++    +AL     M   G   +  T ++ + A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C    ML     +HA  +K+G + D+ V S ++D YVK G +   + +F+++   D V W
Sbjct: 181 CTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237

Query: 562 TTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK 621
            ++I+G   +G+   A+ ++ +M+ +G   ++ T   +++A + +  LE GRQ+HA+++K
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
            D   D  +  +L+DMY KCG++EDA  LF +M  R+ + W+ M+ GLAQ+G   E L++
Sbjct: 298 YD--RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV 355

Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
           F+ MK+ GV P+ VT +GVL ACS+ GLV + +  F  M+  +GI+PE EH++ +VD LG
Sbjct: 356 FDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415

Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
           RAG+  EA E I  M  E  + + R LLGACR+  +     + A +++ LEP D  A VL
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVL 475

Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
           LSN +A   QW D       M+ + ++K+P                       +D I  +
Sbjct: 476 LSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQE 535

Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYG--------------- 883
           +  LI RIK  GYVP T+FVL D+  E+KE  L YHSEK+A  +G               
Sbjct: 536 LNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKN 595

Query: 884 ------------LISTPPSSVILSNKEPLYANRFHHLRDGMCPCAD 917
                       L+S     VI+  ++P+   RFHH +DG C C D
Sbjct: 596 LRICGDCHAFAKLVSKSEGRVIVI-RDPV---RFHHFQDGACSCGD 637



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 76/451 (16%)

Query: 332 SVTFLVALAAVAGTDN----LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
           S+T LV L    GT +    ++   + HG     G    + V NSL +MY+K G +    
Sbjct: 66  SLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDG-AGGLFVSNSLASMYAKFGLLDDAL 124

Query: 384 ----------------------------------------CGLRTDQFTLASVLRASSSL 403
                                                    G+  + +T +SVL A ++ 
Sbjct: 125 RMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTT- 183

Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           P  L     +H   +K    +D FV ++LID Y + G +     +F+     DL  WN++
Sbjct: 184 PGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSI 240

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I G+  S +   A+ELF  M  +G   ++ T+ + ++AC  ++ML+ G+Q+HA+ +K  +
Sbjct: 241 IAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--Y 298

Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
           + DL + + +LDMY KCG++ DA ++F+ +P  D ++W+TM+SG   NG+   AL ++  
Sbjct: 299 DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDL 358

Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------LV 635
           M+  GV P+  T   ++ A S    +E G     ++ +L        GI         +V
Sbjct: 359 MKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRL-------FGIQPEREHHNCMV 411

Query: 636 DMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           D+  + G +++A      M +  ++V+W  +L     H N   +L  +   +   +EPD 
Sbjct: 412 DLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNA--SLAAYAAREILKLEPDD 469

Query: 695 VTFIGVLSACSYTGLV--SEAYENFHLMREK 723
                VL + +Y  L   ++A + +  MR++
Sbjct: 470 -QGARVLLSNTYADLRQWTDAEKPWKAMRDR 499



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 34/282 (12%)

Query: 89  FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
           F++N+L +MY++ G L  A R+FD MP R++++W +++AA A S +G  +   E  R   
Sbjct: 105 FVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALA-SADGRKQ---EALRFLV 160

Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFG 208
           ++R      +  T + +L  C + G + A   VH   +K GL  D FV  +L++ Y K G
Sbjct: 161 AMRRDGVAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLG 217

Query: 209 KIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
            +   + +FD M  RD+V+W  ++  +A++G G     LF+ +  +G   +  ++  VL 
Sbjct: 218 DLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLR 277

Query: 269 -----VISDLGKRHEEQVQAYAIKLLLYN----------------------NNSNVVLWN 301
                V+ + G++    V  Y   L+L+N                         +V+ W+
Sbjct: 278 ACTGMVMLEAGRQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWS 337

Query: 302 KKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
             +SG  Q G +  A+  F  M    V  + VT +  L A +
Sbjct: 338 TMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACS 379



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 9/236 (3%)

Query: 39  LPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMY 98
           L FL        + ++  FS +  A +T  +L   + HA  + +    D F+ ++L+  Y
Sbjct: 156 LRFLVAMRRDGVAPNAYTFSSVLGACTTPGML--TAVHASTVKAGLDSDVFVRSSLIDAY 213

Query: 99  SRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTS 158
            + G L   RR+FD+M  RDL+ WNSI+A +A SG+G          LF  ++++   ++
Sbjct: 214 VKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDG-----VGAIELFMRMKDAGFSSN 268

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
           + TL  +L+ C     + A   VH + LK     D  +  AL+++Y K G + +A  LF 
Sbjct: 269 QGTLTSVLRACTGMVMLEAGRQVHAHVLKYDR--DLILHNALLDMYCKCGSLEDADALFH 326

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            M +RDV+ W  M+   A+NG   E   +F  +   G+ P+  ++  VL   S  G
Sbjct: 327 RMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAG 382



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 184/473 (38%), Gaps = 93/473 (19%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE-----FVSGALVNIYSKFGKIREAK 214
           ++L  L+KLC+  G       +H +    G +  +     FVS +L ++Y+KFG + +A 
Sbjct: 65  VSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDAL 124

Query: 215 FLFDGMQERDVVLWKVMLRAYAE-NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
            +FDGM  R+VV W  ++ A A  +G  +E     V + R G+ P+  +   VLG  +  
Sbjct: 125 RMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTP 184

Query: 274 G---KRHEEQVQA--------------YAIKLLLYNNNSNV---------VLWNKKLSGY 307
           G     H   V+A                +KL   +    V         V+WN  ++G+
Sbjct: 185 GMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGF 244

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAV 367
            Q GD  GAIE F+ M  +    +  T    L A  G   L  G+Q+H   LK  +   +
Sbjct: 245 AQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDL 302

Query: 368 IVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
           I+ N+L++MY    C CG   D   L              H   Q        D ++ S 
Sbjct: 303 ILHNALLDMY----CKCGSLEDADAL-------------FHRMPQ-------RDVISWST 338

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           + + L     +NG   EA  +F+      +A  +  + G + + +    +E   H   S 
Sbjct: 339 MVSGL----AQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSM 394

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           +RL  I        C   L+ + GK   A     G  L+                     
Sbjct: 395 KRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLE--------------------- 433

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
                   PD V W T++  C     ++ +L+ Y    +  + PD+    +L+
Sbjct: 434 --------PDSVIWRTLLGAC--RMHKNASLAAYAAREILKLEPDDQGARVLL 476


>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
          Length = 608

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 184/586 (31%), Positives = 292/586 (49%), Gaps = 79/586 (13%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +++H   +K            L+  Y R+  + +A   F++    DL  ++A++     S
Sbjct: 21  RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHS 80

Query: 471 NNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
           ++    L L   M +    R D   +A+   A G L  L+ G+Q+HA+   S +  D  V
Sbjct: 81  SDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVV 140

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
            S ++DMY KCG   DA+ +F+ I   + V WT +ISG   NG    AL ++  M   G+
Sbjct: 141 KSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGL 200

Query: 590 --------------------------------VPDEFTFAILVKASSCLTALEQGRQIHA 617
                                           + D F  A ++  ++ L AL  GRQ+H 
Sbjct: 201 FTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHG 260

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +++L   S   VG +LVDMY+KC +I  A  +F+ + +R+ + W  +LVG AQHG  EE
Sbjct: 261 FVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEE 320

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
              L+  M   G++P+ VTF+G++ ACS+ GLV +  + F  M+ +YG++P V+HY+  +
Sbjct: 321 VFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYL 380

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D L R+G   EA +LI +MP+E   +   ALL AC+   DT+    VA+ L+ L P D S
Sbjct: 381 DLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPS 440

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADL 834
            Y+LLSN++A   +WD V   R  M    ++K P                        + 
Sbjct: 441 TYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEE 500

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           I   +E L+  +++ GYVPDT  V+ D+EE EKE+ L+ HSE+LA A+G++ +PP SVI 
Sbjct: 501 ITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIR 560

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                               ++ ++ +   A+RFHH  DG C C++
Sbjct: 561 VVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSE 606



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/515 (22%), Positives = 206/515 (40%), Gaps = 115/515 (22%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           +  HAR+L             L++ Y+R   L  ARR FD  P RDL  ++++LAA +HS
Sbjct: 21  RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHS 80

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
              + E V    R  R L +         LA L         +     +H +        
Sbjct: 81  --SDPELVLPLLR--RMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSA 136

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  V  +L+++Y K G  ++A+ +FD +  ++ V+W  ++  YA NG   E   LF  + 
Sbjct: 137 DNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMP 196

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
             GL                                           W   +SG+++ G+
Sbjct: 197 AHGL-----------------------------------------FTWTALISGFVKAGN 215

Query: 313 NHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
             GA+  FV M R +++ +D+      +   A    L LG+Q+HG  ++ GF S++IVGN
Sbjct: 216 YTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGN 275

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           +L++MYSK               S + ++  + EG+              TV D    T 
Sbjct: 276 ALVDMYSK--------------CSDIHSAREVFEGI--------------TVRDVISWTT 307

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
           ++        + EA++                         + +   L++ M  +G + +
Sbjct: 308 IL--------VGEAQH-----------------------GRAEEVFALYNRMLLAGMKPN 336

Query: 492 EITIATAVKACGCLLMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           E+T    + AC    ++++G+Q+       Y MK G +   C     LD+  + G + +A
Sbjct: 337 EVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTC----YLDLLSRSGYLSEA 392

Query: 547 QSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSI 580
           + +   +P  PD+  W  ++S C  + +  + L +
Sbjct: 393 EKLITTMPYEPDEATWGALLSACKKHNDTQMCLRV 427



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 27/219 (12%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L LG+  HA    S    D  + ++L+ MY +CG    AR++FD +  ++ + W ++++ 
Sbjct: 119 LRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISG 178

Query: 129 YAH--------------------------SGEGNAENVTEGFRLFRSLR-ESITFTSRLT 161
           YA                           SG   A N T    LF  +R + I       
Sbjct: 179 YASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFV 238

Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
           LA ++        +     +HG+ +++G +    V  ALV++YSK   I  A+ +F+G+ 
Sbjct: 239 LATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGIT 298

Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD 260
            RDV+ W  +L   A++G  EEVF L+  +  +G+ P++
Sbjct: 299 VRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNE 337



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 15/183 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +++  A   + L+LG+  H  ++    +    + N L+ MYS+C  +  AR +F+ +  R
Sbjct: 241 TVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVR 300

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D+ISW +IL   A    G AE V   F L+  +  +    + +T   L+  C  +G V  
Sbjct: 301 DVISWTTILVGEAQ--HGRAEEV---FALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQK 355

Query: 178 SETV-----HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVM 231
              +       Y +K G+    +     +++ S+ G + EA+ L   M  E D   W  +
Sbjct: 356 GRQLFDSMKREYGMKPGV--QHYT--CYLDLLSRSGYLSEAEKLITTMPYEPDEATWGAL 411

Query: 232 LRA 234
           L A
Sbjct: 412 LSA 414


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 206/619 (33%), Positives = 307/619 (49%), Gaps = 95/619 (15%)

Query: 385 GLRTDQFT----LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
           G   D +T    L +V R SS+ P      + +H H +K     ++ V+T+L+  Y   G
Sbjct: 38  GAMPDAYTFPPLLKAVARGSSAAP-----VRAVHAHVVKFGMGRNAHVATSLVTAYAAGG 92

Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
             A A  L   ++      WNA+I G+       +A   F  M  +G     +T  + + 
Sbjct: 93  DGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLS 152

Query: 501 ACG-----CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC--------------- 540
           ACG      LL    G Q+H   + SG   DL V + ++DMY +C               
Sbjct: 153 ACGKGTGDVLL----GMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQV 208

Query: 541 ----------------GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
                           G + +A+ +F  +P  D V+WT MI G V       AL ++ +M
Sbjct: 209 RSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREM 268

Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
           + S V  DEFT   ++ A + L ALE G  +   + +     D FVG +L+DMY+KCG+I
Sbjct: 269 QCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSI 328

Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
           E A  +FK M  R+   W A+++GLA +G GEE +++F  M      PD VTFIGVL+AC
Sbjct: 329 ERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTAC 388

Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
           ++ GLV +  E F  MRE Y I P V HY  ++D  GRAG+  EA + I  MP   ++++
Sbjct: 389 THAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTI 448

Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
              LL ACRV G++E G+ V E+L+ ++P +S+ Y LLSNI+A  N+W+DV   R  +  
Sbjct: 449 WGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIME 508

Query: 825 KNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
           K +KK+P                       +  I+ K+E +I  +   GY PD   V ++
Sbjct: 509 KGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVE 568

Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPL 900
           V EEEK++ L++HSEKLA A+ L+S+ P++VI                     L  +E +
Sbjct: 569 VAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVV 628

Query: 901 YAN--RFHHLRDGMCPCAD 917
             +  RFHH R G C C D
Sbjct: 629 VRDRTRFHHFRHGFCSCKD 647



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 186/402 (46%), Gaps = 51/402 (12%)

Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-GTD 346
           LL        V+WN  +SG+ +      A   FV+M R+      VT++  L+A   GT 
Sbjct: 100 LLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTG 159

Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
           ++ LG Q+HG  + SG    + V N+L++MY++               + + ++  L +G
Sbjct: 160 DVLLGMQVHGRVVGSGVLPDLRVENALVDMYAE--------------CADMESAWKLFDG 205

Query: 407 LHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
           + +                S VS T+L+    R G + EA  LF      D  +W AMI 
Sbjct: 206 MQVR---------------SVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMID 250

Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
           GY+ +    +ALE+F  M  S    DE T+ + + AC  L  L+ G+ +  Y  + G ++
Sbjct: 251 GYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKM 310

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
           D  V + ++DMY KCG++  A  +F D+   D   WT +I G   NG  + A+ ++H+M 
Sbjct: 311 DAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMI 370

Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQ----------IHANLIKLDCSSDPFVGISLV 635
                PDE TF  ++ A +    +++GR+          I  N++   C         ++
Sbjct: 371 GVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGC---------II 421

Query: 636 DMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           D++ + G I +A     QM M  N+ +W  +L     HGN E
Sbjct: 422 DLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSE 463



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 38/298 (12%)

Query: 9   LKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRH-AISTS 67
           L  R + T V++++      R    F  +   F+  +   ++ +   + S+L      T 
Sbjct: 101 LSERERDTPVVWNALISGHNR-CRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTG 159

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC-------------------------- 101
           D+LLG   H R++ S  +PD  + N L+ MY+ C                          
Sbjct: 160 DVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLS 219

Query: 102 -----GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
                G +  AR LF +MP+RD +SW +++  Y       A    E   +FR ++ S   
Sbjct: 220 GLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQ-----AARFREALEMFREMQCSNVS 274

Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
               T+  ++  C   G +   E V  Y  + G+  D FV  AL+++YSK G I  A  +
Sbjct: 275 ADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDV 334

Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           F  M  RD   W  ++   A NG+GEE   +F  +      PD+ +   VL   +  G
Sbjct: 335 FKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAG 392



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 122/570 (21%), Positives = 219/570 (38%), Gaps = 115/570 (20%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           ++ HA ++      +  +  +L+T Y+  G    AR L  +      + WN+++     S
Sbjct: 63  RAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALI-----S 117

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-LSSGYVWASETVHGYALKIGLV 191
           G        E    F  +  +    + +T   +L  C   +G V     VHG  +  G++
Sbjct: 118 GHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVL 177

Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
            D  V  ALV++Y++   +  A  LFDGMQ R VV W  +L      G  +E   LF   
Sbjct: 178 PDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLF--- 234

Query: 252 HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVG 311
              G  P+ ++V                                    W   + GY+Q  
Sbjct: 235 ---GRMPERDTVS-----------------------------------WTAMIDGYVQAA 256

Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGN 371
               A+E F  M  SNV  D  T +  + A A    L +G+ +     + G      VGN
Sbjct: 257 RFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGN 316

Query: 372 SLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
           +LI+MYSK G                    S+   L + K +H                 
Sbjct: 317 ALIDMYSKCG--------------------SIERALDVFKDMH----------------- 339

Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
                              ++D F   TW A+I G  ++    +A+E+F  M    E  D
Sbjct: 340 -------------------HRDKF---TWTAIILGLAVNGYGEEAIEMFHRMIGVSETPD 377

Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSI 549
           E+T    + AC    ++ +G++    +M+  + +  ++     I+D++ + G + +A   
Sbjct: 378 EVTFIGVLTACTHAGLVDKGREFF-LSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDA 436

Query: 550 FNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT-FAILVKASSCLT 607
            + +P  P+   W T+++ C  +G  ++   +    RL  + P+  T + +L    +   
Sbjct: 437 IDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTE--RLLQMDPENSTVYTLLSNIYAKCN 494

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
             E  R++   +++     +P  G SL++M
Sbjct: 495 RWEDVRRLRHTIMEKGIKKEP--GCSLIEM 522



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 9/270 (3%)

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
           C+    ED A++ Y +M   G +PD +TF  L+KA +  ++    R +HA+++K     +
Sbjct: 19  CLVAARED-AVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRN 77

Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
             V  SLV  YA  G+   A  L  + +    V+WNA++ G  +     E    F DM  
Sbjct: 78  AHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMAR 137

Query: 688 HGVEPDSVTFIGVLSACSY-TGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
            G  P  VT++ VLSAC   TG V    +  H      G+ P++   + LVD        
Sbjct: 138 AGAAPTPVTYVSVLSACGKGTGDVLLGMQ-VHGRVVGSGVLPDLRVENALVDMYAECADM 196

Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP-FDSSAYVLLSNI 805
           + A +L   M   +  S    L G  R+    E     A  L    P  D+ ++  + + 
Sbjct: 197 ESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE-----ARDLFGRMPERDTVSWTAMIDG 251

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPADLI 835
           +  A ++ +      EM+  NV  D   ++
Sbjct: 252 YVQAARFREALEMFREMQCSNVSADEFTMV 281



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 102/259 (39%), Gaps = 15/259 (5%)

Query: 26  DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQI 85
           D Y     F  +L  F +    + S+      S++        L +G+     +      
Sbjct: 250 DGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK 309

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
            D F+ N L+ MYS+CGS+  A  +F  M  RD  +W +I+   A +G G  E   E F 
Sbjct: 310 MDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYG--EEAIEMFH 367

Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIY 204
               + E+      +T   +L  C  +G V    E          +  +    G +++++
Sbjct: 368 RMIGVSET---PDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLF 424

Query: 205 SKFGKIREAKFLFDGM-QERDVVLWKVML---RAYAENGFGEEVFHLFVDLHRSGLCPDD 260
            + GKI EA    D M    +  +W  +L   R +  +  GE V    + +      P++
Sbjct: 425 GRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMD-----PEN 479

Query: 261 ESVQCVLGVISDLGKRHEE 279
            +V  +L  I     R E+
Sbjct: 480 STVYTLLSNIYAKCNRWED 498


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 203/649 (31%), Positives = 303/649 (46%), Gaps = 124/649 (19%)

Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
           D   L +  ++  +LP    L++ +H  A  +    D FV+++L+  Y R G+   A  L
Sbjct: 19  DPHLLPTAFKSCPTLP----LARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARAL 74

Query: 449 FEN-----------------------------------KDGF---DLATWNAMIFGYILS 470
           F+                                    +DG    ++ TWN ++ G   S
Sbjct: 75  FDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRS 134

Query: 471 NNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
             +  A+   + MH  G  R D   ++ A+ A G + ++  G+Q+H YA+K+G   D CV
Sbjct: 135 GRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACV 194

Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDD------------------------------- 558
            + ++DMY KCG   +   +F++    D                                
Sbjct: 195 VTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGV 254

Query: 559 ----VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
               V+WT++++ CV NG++  A+  + +M+  G  P+  T   ++ A + + AL  GR 
Sbjct: 255 ELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRS 314

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
            H   ++     D +V  +LVDMYAKCG ++DA I+F  M  RN V WNAM+ G A +G 
Sbjct: 315 AHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGE 374

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
               + +F  M     +PD VTF  +L+AC+  GL  E    F  M  +YG+ P +EHY+
Sbjct: 375 AVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYA 434

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
            +V  LGRAG+  EA +LI  MPFE  A +  +LLG+CRV G+ +  +  AEKL  LEP 
Sbjct: 435 CMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPE 494

Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
           ++  YVLLSNI+A+   WD V   R  MK   +KK+                        
Sbjct: 495 NAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPM 554

Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
              I  K+  L  ++++ G+VP TDFVL DVEE+EK+  L  HSEKLA A GLIST P +
Sbjct: 555 MTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGT 614

Query: 892 VILSNK---------EPLY--------------ANRFHHLRDGMCPCAD 917
            +   K         E +                NRFHH   G C C D
Sbjct: 615 TLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGD 663



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 181/427 (42%), Gaps = 64/427 (14%)

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           L  YL++G    A   F  M R        + LVA  A  G D     + +       G 
Sbjct: 59  LHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARG-DAEGAWRLLEEMRRDGGV 117

Query: 364 YSAVIVGNSLINMYSKMG----CVCGL---------RTDQFTLASVLRASSSLPEGL-HL 409
              VI  N L++  ++ G     V  L         R D   ++  L A   +  GL  +
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDV--GLVSV 175

Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
            +Q+H +A+K    AD+ V TALID+Y + G  AE   +F+     D+A+ NA+I G  L
Sbjct: 176 GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAG--L 233

Query: 470 SNNSH-------------------------------------KALELFSHMHTSGERLDE 492
           S N+                                      +A+E F  M   G   + 
Sbjct: 234 SRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNS 293

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           +TI   + A   +  L  G+  H +A++ GF  D+ VSS ++DMY KCG + DA+ IF+ 
Sbjct: 294 VTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDT 353

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
           + + + V+W  MI G    GE   A+ ++H M      PD  TF  L+ A +     E+G
Sbjct: 354 MVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEG 413

Query: 613 R----QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLV 667
           R    ++H N   +    + +    +V +  + G +++AY L   M    +  +W ++L 
Sbjct: 414 RHYFKEMH-NEYGVSPRMEHYA--CMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLG 470

Query: 668 GLAQHGN 674
               HGN
Sbjct: 471 SCRVHGN 477



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 193/457 (42%), Gaps = 68/457 (14%)

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRAY 235
           +  +H  A   GL  D FV+ +L++ Y + G    A+ LFDGM   +R VV W  ++ A+
Sbjct: 36  ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAH 95

Query: 236 AENGFGEEVFHLFVDLHRSG-------------------------------------LCP 258
           A  G  E  + L  ++ R G                                     L P
Sbjct: 96  AARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRP 155

Query: 259 DDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
           D   V C L  + D+G     +Q+  YA+K       ++  +    +  Y + G     +
Sbjct: 156 DATGVSCALSAVGDVGLVSVGQQLHGYAVKA---GCRADACVVTALIDMYGKCGQAAEVV 212

Query: 318 ECFVNMIRSNVQYDSVTFLVA-LAAVAGT--------DNLNLGQQIHGTTLKSGFYSAVI 368
             F     S++   S   L+A L+  A          + ++ G +++  +  S     V 
Sbjct: 213 RVFDE--SSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQ 270

Query: 369 VGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
            G  L  +  + +M    G   +  T+  VL A +++   +H  +  H  A++   + D 
Sbjct: 271 NGKDLEAVEFFREMQAQ-GTEPNSVTIPCVLPAFANVAALMH-GRSAHCFALRKGFLHDV 328

Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
           +VS+AL+D+Y + G + +A  +F+     ++ +WNAMI GY +   +  A+ +F  M   
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKC 388

Query: 487 GERLDEITIATAVKACGCLLMLKQG----KQMH-AYAMKSGFELDLCVSSGILDMYVKCG 541
            ++ D +T    + AC    + ++G    K+MH  Y +    E   C    ++ +  + G
Sbjct: 389 KQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYAC----MVTLLGRAG 444

Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            + +A  + +D+P  PD   W +++  C  +G  DLA
Sbjct: 445 KLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)

Query: 78  RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR----DLISWNSILAAYAHSG 133
           R+ + S   D    N L+   SR   +  A RLF +  DR    +++SW SI+A    +G
Sbjct: 213 RVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNG 272

Query: 134 EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD 193
           +       E    FR ++   T  + +T+  +L    +   +    + H +AL+ G + D
Sbjct: 273 KD-----LEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHD 327

Query: 194 EFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHR 253
            +VS ALV++Y+K G++++A+ +FD M  R+VV W  M+  YA  G       +F  + +
Sbjct: 328 VYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLK 387

Query: 254 SGLCPDDESVQCVLGVISDLGKRHE 278
               PD  +  C+L   +  G   E
Sbjct: 388 CKQKPDMVTFTCLLAACTQAGLTEE 412



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 6/169 (3%)

Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
           S++H +R     PD        K  SC T L   R +HA       + DPFV  SL+  Y
Sbjct: 6   SLHHFLRHVSFPPDPHLLPTAFK--SCPT-LPLARALHAVAEVSGLARDPFVASSLLHAY 62

Query: 639 AKCGNIEDAYILFKQM--DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH-GVEPDSV 695
            + G   +A  LF  M    R  V W+A++   A  G+ E   +L E+M+   GVEP+ +
Sbjct: 63  LRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVI 122

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           T+ G++S  + +G   +A      M  +  + P+    S  + A+G  G
Sbjct: 123 TWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVG 171



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L+ G+S H   L    + D ++++ L+ MY++CG +  AR +FD M  R+++SWN+++  
Sbjct: 309 LMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGG 368

Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-- 186
           YA  GE           +F S+ +       +T   LL  C  +G     E  H +    
Sbjct: 369 YAMYGEA-----VNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLT--EEGRHYFKEMH 421

Query: 187 -KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG----- 239
            + G+         +V +  + GK+ EA  L   M  E D  +W  +L +   +G     
Sbjct: 422 NEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481

Query: 240 --FGEEVFHL 247
               E++FHL
Sbjct: 482 EVAAEKLFHL 491


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 216/752 (28%), Positives = 359/752 (47%), Gaps = 112/752 (14%)

Query: 265 CVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
           C LGV + L          +A +L+      N V +N  +S Y + G    A+E F    
Sbjct: 45  CRLGVGAPL----------HAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARAR 94

Query: 325 RS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG-- 381
            +  ++ D  T+  ALAA +   +L  G+ +H  T+  G  + V + NSL +MY+  G  
Sbjct: 95  AAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEM 154

Query: 382 -----------------------------------------CVCGLRTDQFTLASVLRAS 400
                                                    C  GL  + F L S+++  
Sbjct: 155 GEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCC 214

Query: 401 SSLPE-GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           +S  + G H+++ +H   +K    AD F+++A+ID+Y + G++  A  LF++    ++  
Sbjct: 215 ASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIV 274

Query: 460 WNAMIFGY------ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
           +NAMI G+      +    S +AL L+S M + G +  E T ++ ++AC        GKQ
Sbjct: 275 FNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQ 334

Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
           +H   +K  F  D  + S ++D+Y   G M D    F  +P  D V WT+MISGCV N  
Sbjct: 335 IHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNEL 394

Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
            + AL ++ +    G+ PD FT + ++ A + L     G QI    IK   +    +G S
Sbjct: 395 FEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNS 454

Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
            + M A+ G+++     F++M+ R+ V W+A++   AQHG   + L++F +M    V P+
Sbjct: 455 FIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPN 514

Query: 694 SVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELI 753
            VTF+ VL+ACS+ GLV +    + +M+ +YG+ P ++H + +VD LGRAGR  +A   I
Sbjct: 515 EVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFI 574

Query: 754 LSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWD 813
               F   A + R+LL +CR+ GD E G+ VA+++M LEP  S++YV+L N++  A +  
Sbjct: 575 RDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELS 634

Query: 814 DVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGG 850
             +  R  MK + VKK+P                       ++ I+ K+  ++ +I++  
Sbjct: 635 LASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEK-- 692

Query: 851 YVPDTDFVLL--DVEEEEKERALYYHSEKLARAYGLISTPPSSVIL-------------- 894
            + +TD      D     ++  +  HSEK+A A+G+I  P S+ I               
Sbjct: 693 -LANTDNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHST 751

Query: 895 -------SNKEPLYAN--RFHHLRDGMCPCAD 917
                   N+E +  +  RFHH R G C C D
Sbjct: 752 MKLISGSENREIILRDGIRFHHFRGGSCSCGD 783



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 249/586 (42%), Gaps = 93/586 (15%)

Query: 74  STHARILNSSQIPDRFLTNNLMTMYSR--CGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           + HA I  +      FL N+L+  Y R   G+ ++A RL D+MP R+ +S+N ++++Y+ 
Sbjct: 20  AVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSR 79

Query: 132 SG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
           +G  G A       R    LR       R T A  L  C  +  +   + VH   +  GL
Sbjct: 80  AGLPGRALETFARARAAAGLR-----VDRFTYAAALAACSRALDLRTGKAVHAMTVLDGL 134

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
               F+S +L ++Y+  G++ EA+ +FD  +E D V W  +L  Y   G  EE   +F  
Sbjct: 135 GNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSL 194

Query: 251 LHRSGLCPDDESVQCVLGVI---SDLGKRHEEQVQA--------------------YAIK 287
           +   GL  +  ++  ++      SD+G+   E V                      YA +
Sbjct: 195 MCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKR 254

Query: 288 LLLYNN--------NSNVVLWNKKLSGYLQ----VGD--NHGAIECFVNMIRSNVQYDSV 333
             L N         + NV+++N  ++G+ +    VG   +  A+  +  M    +Q    
Sbjct: 255 GALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEF 314

Query: 334 TFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC----------- 382
           TF   L A         G+QIHG  LK  F+    +G++LI++YS  GC           
Sbjct: 315 TFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSL 374

Query: 383 -------------------------------VC-GLRTDQFTLASVLRASSSLPEGLHLS 410
                                          +C GL+ D FT++SV+ A +SL       
Sbjct: 375 PKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVA-RTG 433

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           +QI   AIK      + +  + I +  R+G +      F+  +  D+ +W+A+I  +   
Sbjct: 434 EQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQH 493

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
             +  AL +F+ M  +    +E+T    + AC    ++  G + +   MK+ + L   + 
Sbjct: 494 GCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEI-MKNEYGLSPTIK 552

Query: 531 --SGILDMYVKCGAMVDAQSIFNDIPAPDD-VAWTTMISGCVDNGE 573
             + ++D+  + G + DA++   D    DD V W ++++ C  +G+
Sbjct: 553 HVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGD 598



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 42/351 (11%)

Query: 68  DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           DL  GK+ HA  +        FL+N+L +MY+ CG +  ARR+FD   + D +SWNS+L+
Sbjct: 118 DLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLS 177

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA--SETVHGYA 185
            Y  +G        E  ++F  +       +   L  ++K C S   V    +E VHG  
Sbjct: 178 GYVRAGARE-----ETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA--ENGFGEE 243
           +K GL  D F++ A++++Y+K G +  A  LF  + + +V+++  M+  +   E   G+E
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKE 292

Query: 244 V----FHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIK------- 287
           V      L+ ++   G+ P + +   +L   +       GK+   QV  ++         
Sbjct: 293 VSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGS 352

Query: 288 --LLLYNNN---------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
             + LY+++                ++V W   +SG +Q      A+  F   I   ++ 
Sbjct: 353 ALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKP 412

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
           D  T    + A A       G+QI    +K GF     +GNS I+M ++ G
Sbjct: 413 DLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSG 463



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 32/318 (10%)

Query: 58  SILRHAISTSDL--LLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           SI++   S SD+   + ++ H  ++ +    D FL + ++ MY++ G+L  A  LF  +P
Sbjct: 209 SIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP 268

Query: 116 DRDLISWNSILAAYAHSGEGNAENVT-EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
           D ++I +N+++A +        + V+ E   L+  ++      S  T + +L+ C  +G 
Sbjct: 269 DPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGE 328

Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
               + +HG  LK     D+++  AL+++YS  G + +    F  + ++D+V W  M+  
Sbjct: 329 FGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISG 388

Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYN- 292
             +N   E+   LF +    GL PD  ++  V+   + L   R  EQ+Q  AIK      
Sbjct: 389 CVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRF 448

Query: 293 ---------------------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                       + +VV W+  +S + Q G    A+  F  M+ 
Sbjct: 449 TAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMN 508

Query: 326 SNVQYDSVTFLVALAAVA 343
           + V  + VTFL  L A +
Sbjct: 509 AKVAPNEVTFLNVLTACS 526


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 190/546 (34%), Positives = 284/546 (52%), Gaps = 55/546 (10%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H H +K+    DS++  +LI +Y     +  A+ LF      D+ +WNAMI GY+    
Sbjct: 22  VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGE 81

Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
                 +F  M       D I+  T +     +  + + K++         E +L   + 
Sbjct: 82  MGHTRMVFDRMVCR----DVISWNTIINGYAIVGKIDEAKRL----FDEMPERNLVSWNS 133

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
           +L  +VKCG + +A  +F+++P  D V+W +M++     G+ + AL+++ QMR  GV P 
Sbjct: 134 MLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPT 193

Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
           E T   L+ A + L AL++G  +H  +       +  VG +LVDMYAKCG I  A  +F 
Sbjct: 194 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 253

Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
            M+ ++ + WN ++ G+A HG+ +E  +LF++MK   VEP+ +TF+ +LSACS+ G+V E
Sbjct: 254 AMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDE 313

Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
             +    M   YGIEP+VEHY  ++D L RAG  +EA ELI +MP E + S   ALLG C
Sbjct: 314 GQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGC 373

Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP- 831
           R+ G+ E G+ V ++L+ L+P  S  Y+LLSNI+AAA +WDD    R  MK   + K P 
Sbjct: 374 RIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPG 433

Query: 832 ----------------------ADLIFAKVEGLIKRIKEG-GYVPDTDFVLLDVEEEEKE 868
                                 ++ I+ K+  +  R+K   GY  DT  VLLD+EEE+KE
Sbjct: 434 VSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKE 493

Query: 869 RALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA--------NRF 905
            AL  HSEKLA AYGL+       I   K                 +Y         NRF
Sbjct: 494 HALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRF 553

Query: 906 HHLRDG 911
           HH  DG
Sbjct: 554 HHFEDG 559



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 189/427 (44%), Gaps = 54/427 (12%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
           +T   ++K C  S   W    VH + +K G   D ++  +L+++Y+    +  AK LF  
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE 279
             +RDVV W  M+  Y + G   E+ H  +   R  +C D  S   ++   + +GK  E 
Sbjct: 61  CSDRDVVSWNAMIDGYVKRG---EMGHTRMVFDRM-VCRDVISWNTIINGYAIVGKIDE- 115

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVA 338
                A +L       N+V WN  LSG+++ G+   A   F  M  R  V ++S   ++A
Sbjct: 116 -----AKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNS---MLA 167

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
             A  G  N  L                         ++ +M  V G++  + T+ S+L 
Sbjct: 168 CYAQCGKPNEALA------------------------LFDQMRAV-GVKPTEATVVSLLS 202

Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTV--ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
           A + L     L K +H+H   ND     +S V TAL+D+Y + G ++ A  +F   +  D
Sbjct: 203 ACAHLGA---LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 259

Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-- 514
           +  WN +I G  +  +  +A +LF  M  +    ++IT    + AC    M+ +G+++  
Sbjct: 260 VLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLD 319

Query: 515 ---HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVD 570
               +Y ++   E   CV    +D+  + G + +A  +   +P  P+  A   ++ GC  
Sbjct: 320 CMSSSYGIEPKVEHYDCV----IDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRI 375

Query: 571 NGEEDLA 577
           +G  +L 
Sbjct: 376 HGNFELG 382



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 152/313 (48%), Gaps = 12/313 (3%)

Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
           +T    +KAC    +   G  +H + +KSGFE D  + + ++ +Y     +  A+ +F+ 
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
               D V+W  MI G V  GE      ++ +M    V  D  ++  ++   + +  +++ 
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEA 116

Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
           +++   + + +  S      S++  + KCGN+E+A+ LF +M  R+ V WN+ML   AQ 
Sbjct: 117 KRLFDEMPERNLVS----WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172

Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
           G   E L LF+ M+A GV+P   T + +LSAC++ G + +   + H       IE     
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGL-HLHTYINDNRIEVNSIV 231

Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL--MA 790
            + LVD   + G+   A ++  +M  +   + +  + G   + G  +  + + +++   +
Sbjct: 232 GTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMA-IHGHVKEAQQLFKEMKEAS 290

Query: 791 LEPFDSSAYVLLS 803
           +EP D +   +LS
Sbjct: 291 VEPNDITFVAMLS 303



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 8/213 (3%)

Query: 70  LLGKSTHARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
           ++GK   A+ L   ++P+R L   N++++ + +CG++  A  LF +MP RD++SWNS+LA
Sbjct: 109 IVGKIDEAKRL-FDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLA 167

Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
            YA  G+ N     E   LF  +R      +  T+  LL  C   G +     +H Y   
Sbjct: 168 CYAQCGKPN-----EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIND 222

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
             +  +  V  ALV++Y+K GKI  A  +F+ M+ +DV+ W  ++   A +G  +E   L
Sbjct: 223 NRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQL 282

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           F ++  + + P+D +   +L   S  G   E Q
Sbjct: 283 FKEMKEASVEPNDITFVAMLSACSHAGMVDEGQ 315



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 157/367 (42%), Gaps = 70/367 (19%)

Query: 40  PFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS 99
           PF+ K+    + SS  WF +L               H  ++ S    D ++ N+L+ +Y+
Sbjct: 4   PFVIKA---CNESSVTWFGLL--------------VHTHVVKSGFECDSYIVNSLIHLYA 46

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRESITFTS 158
               L  A++LF    DRD++SWN+++  Y   GE G+   V +  R+    R+ I++ +
Sbjct: 47  NGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFD--RMV--CRDVISWNT 102

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLV-WDEFVSGALVNIYSKFGKIREAKFLF 217
            +    ++      G +  ++ +     +  LV W+  +SG     + K G + EA  LF
Sbjct: 103 IINGYAIV------GKIDEAKRLFDEMPERNLVSWNSMLSG-----FVKCGNVEEAFGLF 151

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG--- 274
             M  RDVV W  ML  YA+ G   E   LF  +   G+ P + +V  +L   + LG   
Sbjct: 152 SEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALD 211

Query: 275 -----------KRHEEQ-------VQAYA------IKLLLYN--NNSNVVLWNKKLSGYL 308
                       R E         V  YA      +   ++N   + +V+ WN  ++G  
Sbjct: 212 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMA 271

Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKS 361
             G    A + F  M  ++V+ + +TF+  L+A +    ++ GQ++       +G   K 
Sbjct: 272 IHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKV 331

Query: 362 GFYSAVI 368
             Y  VI
Sbjct: 332 EHYDCVI 338


>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 212/706 (30%), Positives = 352/706 (49%), Gaps = 80/706 (11%)

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY---SKFGKIREAKFLF 217
           T   LLK   + G +     +H + +K G     +++  L+ +Y    KF +I +    F
Sbjct: 23  TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82

Query: 218 DGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-- 275
           DG    D+V+   M+ AY + G   +   LF ++      P+   V     +IS L K  
Sbjct: 83  DG---SDLVVSNCMISAYVQWGNLVQARLLFDEM------PERNEVSWS-ALISGLMKYG 132

Query: 276 RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTF 335
           R EE +  +       N   NVV W   +SG+++ G N  A++ F  ++ S V+ + VTF
Sbjct: 133 RVEESMWYFE-----RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTF 187

Query: 336 LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS 395
              + A     +  LG  I G  +K+GF   + V NSLI +  +MG              
Sbjct: 188 TSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMG-------------- 233

Query: 396 VLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF 455
                      + L++++     K D V+     TA++D Y   G + EA  +F+     
Sbjct: 234 ----------EIDLARRVFDRMEKRDVVS----WTAILDAYVETGDLREARRIFDEMPER 279

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           +  +W+AMI  Y  S  + +AL+LFS M   G + +    A  + A   L  L  G  +H
Sbjct: 280 NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIH 339

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN------------------------ 551
            +  K G + D+ + S ++D+Y KCG   D + +F+                        
Sbjct: 340 GHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLE 399

Query: 552 -------DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
                   IP  +D +W T+J+G ++N + +  L +++ + +SG  P++ TF+ ++ A +
Sbjct: 400 EXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACA 459

Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
            + +L++G  +H  +IKL    D FVG +L DMYAKCG+I  +  +F++M  +N + W  
Sbjct: 460 SIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTV 519

Query: 665 MLVGLAQHGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
           M+ GLA+ G   E+L LFE+M +   V P+ +  + VL ACS+ GLV +    F+ M + 
Sbjct: 520 MIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKV 579

Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
           YGI+P+ +HY+ +VD L R+GR  EA E I ++PF+  A+   ALL  C+   D +  + 
Sbjct: 580 YGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAER 639

Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
            A+KL  L   +S+ YVLLSNI+A+A +W DV++ R  M+ K +KK
Sbjct: 640 TAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKK 685



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 134/610 (21%), Positives = 236/610 (38%), Gaps = 134/610 (21%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+   +   +  G   HA ++ +     R++   L+ +Y  C       ++  +    
Sbjct: 26  SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           DL+  N +++AY   G     N+ +   LF  + E                         
Sbjct: 86  DLVVSNCMISAYVQWG-----NLVQARLLFDEMPE------------------------- 115

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
                    +  + W   +SG +     K+G++ E+ + F+    ++VV W   +  +  
Sbjct: 116 ---------RNEVSWSALISGLM-----KYGRVEESMWYFERNPFQNVVSWTAAISGFVR 161

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCV----------------LGVISDLGKRHEEQV 281
           NG   E   LF  L  SG+ P+D +   V                LG++   G  H   V
Sbjct: 162 NGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSV 221

Query: 282 QAYAIKLLL-------------YNNNSNVVLWNKKLSGYLQVGD---------------- 312
               I L L                  +VV W   L  Y++ GD                
Sbjct: 222 SNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNE 281

Query: 313 ---------------NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
                             A++ F  M++   + +   F   L+A+A    L+ G  IHG 
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGH 341

Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
             K G    V +G+SLI++Y    C CG   D             L   L L K +    
Sbjct: 342 VTKIGIDKDVFIGSSLIDLY----CKCGKPDD-----------GRLVFDLILEKNV---- 382

Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                        +++  Y  NG + E E LFE     +  +W  +J GY+ +    K L
Sbjct: 383 ---------VCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVL 433

Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
           E+F+ +  SG+  ++ T ++ + AC  +  L +G  +H   +K G + D+ V + + DMY
Sbjct: 434 EVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMY 493

Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM-RLSGVVPDEFT- 595
            KCG +  ++ +F  +P  ++++WT MI G  ++G    +L ++ +M R S V P+E   
Sbjct: 494 AKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELML 553

Query: 596 FAILVKASSC 605
            ++L   S C
Sbjct: 554 LSVLFACSHC 563



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 127/556 (22%), Positives = 216/556 (38%), Gaps = 132/556 (23%)

Query: 34  FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
             +S+L  + K+ F    S S   S++  ++   ++ L +    R+ +  +  D      
Sbjct: 202 LGMSILGLVVKAGFEHYLSVSN--SLITLSLRMGEIDLAR----RVFDRMEKRDVVSWTA 255

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++  Y   G L  ARR+FD+MP+R+ ISW++++A Y+ SG        E  +LF  + + 
Sbjct: 256 ILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAE-----EALKLFSKMVQE 310

Query: 154 ITFTSRL-----TLAPLLKL-CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
             F   +     TL+ L  L  LS+G       +HG+  KIG+  D F+  +L+++Y K 
Sbjct: 311 -GFKPNISCFACTLSALASLRALSAGI-----NIHGHVTKIGIDKDVFIGSSLIDLYCKC 364

Query: 208 GKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL 267
           GK  + + +FD + E++VV W  M+  Y+ NG  EE   LF  +       +D S   +J
Sbjct: 365 GKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPE----KNDXSWGTIJ 420

Query: 268 GVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                 G    EQ +                                  +E F  ++ S 
Sbjct: 421 A-----GYLENEQCEK--------------------------------VLEVFNTLLVSG 443

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
              +  TF   L A A   +L+ G  +HG  +K G    + VG +L +MY+K G      
Sbjct: 444 QTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG------ 497

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                + S  +    +PE   +S                   T +I     +G   E+  
Sbjct: 498 ----DIGSSKQVFERMPEKNEIS------------------WTVMIQGLAESGFAVESLI 535

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSH-----KALELFSHMHTSGERLDEITIATAVKAC 502
           LFE  +       N ++   +L   SH     K L  F+ M                   
Sbjct: 536 LFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSME------------------ 577

Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAW 561
                         Y +K   +   CV    +D+  + G + +A+     IP  P+  AW
Sbjct: 578 ------------KVYGIKPKGKHYTCV----VDLLSRSGRLYEAEEFIRTIPFQPEANAW 621

Query: 562 TTMISGCVDNGEEDLA 577
             ++SGC    +E +A
Sbjct: 622 AALLSGCKKYKDEKIA 637


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 192/592 (32%), Positives = 312/592 (52%), Gaps = 81/592 (13%)

Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
           L  +K +H H +K   V    ++  L++VY + G+ + A  +F+     D   W +++  
Sbjct: 19  LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78

Query: 467 YILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
              +N S K L +FS + +S   R D+   +  VKAC  L  +  G+Q+H + + S +  
Sbjct: 79  LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138

Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL------- 578
           D  V S ++DMY KCG +  A+++F+ I   + ++WT M+SG   +G ++ AL       
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198

Query: 579 ------------------------SIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGR 613
                                   S++ +MR   V + D    + +V A + L A   GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q+H  +I L   S  F+  +L+DMYAKC ++  A  +F +M  R+ V W +++VG+AQHG
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             E+ L L++DM +HGV+P+ VTF+G++ ACS+ G V +  E F  M + YGI P ++HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM-ALE 792
           + L+D LGR+G   EA  LI +MPF        ALL AC+ QG  + G  +A+ L+ + +
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438

Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFA----- 837
             D S Y+LLSNI+A+A+ W  V+ AR ++    V+KDP           ++ +A     
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498

Query: 838 ----KVEGLIKRIKE-----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
                +  L+K+++E      GYVPDT ++L D++E+EKE+ L++HSE+ A AYGL+   
Sbjct: 499 PLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAV 558

Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
           P + I                     ++ +E +   A R+HH + G C C D
Sbjct: 559 PGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCND 610



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 127/566 (22%), Positives = 224/566 (39%), Gaps = 113/566 (19%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L   K+ HA I+    +    L N L+ +Y +CG+  +A ++FD+MP RD I+W S+L A
Sbjct: 19  LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78

Query: 129 YAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
              +   G   +V         LR           + L+K C + G +     VH + + 
Sbjct: 79  LNQANLSGKTLSVFSSVGSSSGLR-----PDDFVFSALVKACANLGSIDHGRQVHCHFIV 133

Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
                DE V  +LV++Y+K G +  AK +FD ++ ++ + W  M+  YA++G  EE   L
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193

Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
           F                 +L V                          N+  W   +SG+
Sbjct: 194 FR----------------ILPV-------------------------KNLYSWTALISGF 212

Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN---LGQQIHGTTLKSGFY 364
           +Q G    A   F  M R  V  D +  LV  + V    NL     G+Q+HG  +  GF 
Sbjct: 213 VQSGKGLEAFSVFTEMRRERV--DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD 270

Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
           S V + N+LI+MY+K   V                          +K I       D V+
Sbjct: 271 SCVFISNALIDMYAKCSDVIA------------------------AKDIFSRMRHRDVVS 306

Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
                T+LI    ++G   +A  L+++                               M 
Sbjct: 307 ----WTSLIVGMAQHGQAEKALALYDD-------------------------------MV 331

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAM 543
           + G + +E+T    + AC  +  +++G+++     K  G    L   + +LD+  + G +
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391

Query: 544 VDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
            +A+++ + +P  PD+  W  ++S C   G   + + I   +  S  + D  T+ +L   
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 451

Query: 603 SSCLTALEQGRQIHANLIKLDCSSDP 628
            +  +   +  +    L +++   DP
Sbjct: 452 YASASLWGKVSEARRKLGEMEVRKDP 477


>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 195/554 (35%), Positives = 283/554 (51%), Gaps = 78/554 (14%)

Query: 442 MAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA 501
           +A A+ +F +      + +N++I     S    +AL L+  M  SG + D +T    +KA
Sbjct: 116 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 175

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY---------------------VKC 540
           C    +   G  +H + +KSGFE D  + S ++ +Y                     V  
Sbjct: 176 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 235

Query: 541 GAMVD----------AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
            AM+D          A+ +F+ +   D ++W TMI+G    G+ + AL+++ QMR  GV 
Sbjct: 236 NAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVK 295

Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
           P E T   L+ A + L AL++G  +H  +       +  VG +LVDMYAKCG I  A  +
Sbjct: 296 PTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQV 355

Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
           F  M+ ++ + WN ++ G+A HGN +E  +LF++MK  GVEP+ +TF+ +LSACS+ G+V
Sbjct: 356 FNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 415

Query: 711 SEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            E  +    M   YGIEP+VEHY  ++D L RAG  +EA ELI +MP E + S   ALLG
Sbjct: 416 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLG 475

Query: 771 ACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
            CR+ G+ E G+ V ++L+ L+P  S  Y+LLSNI+AAA +WDD    R  MK   + K 
Sbjct: 476 GCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKV 535

Query: 831 P-----------------------ADLIFAKVEGLIKRIKEG-GYVPDTDFVLLDVEEEE 866
           P                       ++ I+ K+  +  R+K   GY  DT  VLLD+EEE+
Sbjct: 536 PGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEED 595

Query: 867 KERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA--------N 903
           KE AL  HSEKLA AYGL+       I   K                 +Y         N
Sbjct: 596 KEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRN 655

Query: 904 RFHHLRDGMCPCAD 917
           RFHH  DG C C D
Sbjct: 656 RFHHFEDGECSCLD 669



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 181/403 (44%), Gaps = 44/403 (10%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
           AYA  +  +  N    L+N  +           A+  +  M++S ++ D +T+   + A 
Sbjct: 117 AYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKAC 176

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
             +     G  +H   +KSGF     + +SLI++Y+  G   G     F L S       
Sbjct: 177 NESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYAN-GKDLGAAKQLFNLCSA------ 229

Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
                                 D     A+ID Y ++  M  A  +F+     D+ +WN 
Sbjct: 230 ---------------------RDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNT 268

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY +    ++AL LF  M   G +  E T+ + + AC  L  L +G  +H Y   + 
Sbjct: 269 MINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNR 328

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
            E++  V + ++DMY KCG +  A  +FN + + D +AW T+I+G   +G    A  ++ 
Sbjct: 329 IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFK 388

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS--------L 634
           +M+ +GV P++ TF  ++ A S    +++G+++      LDC S  + GI         +
Sbjct: 389 EMKEAGVEPNDITFVAILSACSHAGMVDEGQKL------LDCMSSSY-GIEPKVEHYGCV 441

Query: 635 VDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
           +D+ A+ G +E+A  L   M M  N     A+L G   HGN E
Sbjct: 442 IDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 484



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 48/296 (16%)

Query: 2   YTQLQANLKPRHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILR 61
           +T LQ+ LKP H             TY           PF+ K+    + SS  WF +L 
Sbjct: 155 HTMLQSGLKPDHM------------TY-----------PFVIKA---CNESSVTWFGLLV 188

Query: 62  HA------------ISTSDLLL---GKSTHA--RILNSSQIPDRFLTNNLMTMYSRCGSL 104
           H             I +S + L   GK   A  ++ N     D    N ++  Y +   +
Sbjct: 189 HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 248

Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
            +AR +FD+M  RD+ISWN+++  YA  G+ N     E   LF  +R      +  T+  
Sbjct: 249 GHARMVFDRMVCRDVISWNTMINGYAICGKPN-----EALALFDQMRAVGVKPTEATVVS 303

Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
           LL  C   G +     +H Y     +  +  V  ALV++Y+K GKI  A  +F+ M+ +D
Sbjct: 304 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 363

Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           V+ W  ++   A +G  +E   LF ++  +G+ P+D +   +L   S  G   E Q
Sbjct: 364 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQ 419



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 100/484 (20%), Positives = 176/484 (36%), Gaps = 123/484 (25%)

Query: 104 LVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLA 163
           L YA+ +F  + +     +NS++ A + S     +   E   L+ ++ +S      +T  
Sbjct: 116 LAYAKTIFHHLQNPPPSLYNSLIRALSSS-----KTPLEALPLYHTMLQSGLKPDHMTYP 170

Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
            ++K C  S   W    VH + +K G   D ++  +L+++Y+    +  AK LF+    R
Sbjct: 171 FVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR 230

Query: 224 DVVLWKVMLRAY---AENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
           DVV W  M+  Y    E G    VF   V       C D                     
Sbjct: 231 DVVSWNAMIDGYVKHVEMGHARMVFDRMV-------CRD--------------------- 262

Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                           V+ WN  ++GY   G  + A+  F  M    V+    T +  L+
Sbjct: 263 ----------------VISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLS 306

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLAS-VLRA 399
           A A    L+ G  +H     +      IVG +L++MY+K G        + +LA+ V  A
Sbjct: 307 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCG--------KISLATQVFNA 358

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
             S                      D      +I     +G++ EA+ LF+         
Sbjct: 359 MES---------------------KDVLAWNTIIAGMAIHGNVKEAQQLFKE-------- 389

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM----- 514
                                  M  +G   ++IT    + AC    M+ +G+++     
Sbjct: 390 -----------------------MKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMS 426

Query: 515 HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGE 573
            +Y ++   E   CV    +D+  + G + +A  +   +P  P+  A   ++ GC  +G 
Sbjct: 427 SSYGIEPKVEHYGCV----IDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGN 482

Query: 574 EDLA 577
            +L 
Sbjct: 483 FELG 486


>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 182/561 (32%), Positives = 286/561 (50%), Gaps = 65/561 (11%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
           KQ+H H +K ++   S   + +  V   N S + A+ +F+  D  ++  WN  +  +   
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
           ++   A+ LF  +       D  T +  +KAC  LL ++ GK +H Y  K G + ++ + 
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDV------------------------------- 559
           + I+ +Y  CG +  A+ +F+ +P  D +                               
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 560 AWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
           +WT+MI G    G+   A+ ++ +M  +G++P+E T   ++ A + +  L  GR+IH   
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 620 IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETL 679
            +     +  V  +L+DMY KCG +EDA  +F  M+ R  V W+AM+ GLA HG  E+ L
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 680 KLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDA 739
            LF  M   GV+P++VTFIG+L ACS+ G+V +  + F  M   YGI P +EHY  +VD 
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDL 391

Query: 740 LGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAY 799
             RAG  +EA E I++MP   +  +  ALLG C+V  + +  +     L  L+P +   Y
Sbjct: 392 FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYY 451

Query: 800 VLLSNIFAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
           V+LSNI+A A +W+DV   R  M+ +              E L++R+K  GYVP+T  VL
Sbjct: 452 VVLSNIYAEAGRWEDVARVRKLMRDR-----------GTWEKLLQRMKLKGYVPNTSVVL 500

Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKE 898
           LD+EE++KE+ LY HSEKLA  +GLI T P +VI                     +S +E
Sbjct: 501 LDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTRE 560

Query: 899 PLY--ANRFHHLRDGMCPCAD 917
            +    NRFH  ++G C C D
Sbjct: 561 IVVRDRNRFHCFKNGSCSCGD 581



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/620 (22%), Positives = 246/620 (39%), Gaps = 153/620 (24%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
           K  HA +L ++        + + ++ +   S  YA+ +F  +   ++  WN+ L ++A  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA-E 90

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
           G+  A+ ++    LF  LRE        T + +LK C     V   + VHGY  K+GL  
Sbjct: 91  GDSPADAIS----LFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQS 146

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           + F+   +V++Y+  G+I  A+ +FD M +RDV+ W +M+    + G  E  + LF ++ 
Sbjct: 147 NMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEM- 205

Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
                P+                                    NV  W   + GY Q G 
Sbjct: 206 -----PE-----------------------------------RNVRSWTSMIGGYAQCGK 225

Query: 313 NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS 372
           +  AI+ F+ M  + +  + VT +  L A A   NL LG++IH  + +SG+   + V N+
Sbjct: 226 SKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNT 285

Query: 373 LINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
           LI+MY K GC          L    R   ++ E   +S                   +A+
Sbjct: 286 LIDMYVKCGC----------LEDACRIFDNMEERTVVS------------------WSAM 317

Query: 433 IDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDE 492
           I     +G   +A           LA +N MI                     +G + + 
Sbjct: 318 IAGLAAHGRAEDA-----------LALFNKMI--------------------NTGVKPNA 346

Query: 493 ITIATAVKACGCLLMLKQGKQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
           +T    + AC  + M+++G++  A     Y +    E   C    ++D++ + G + +A 
Sbjct: 347 VTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC----MVDLFSRAGLLQEAH 402

Query: 548 SIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
               ++P AP+ V W  ++ GC           ++  ++L                    
Sbjct: 403 EFIMNMPIAPNGVVWGALLGGC----------KVHKNVKL-------------------- 432

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            A E  R     L KLD  +D +  + L ++YA+ G  ED   + K M  R T  W  +L
Sbjct: 433 -AEEATRH----LSKLDPLNDGYY-VVLSNIYAEAGRWEDVARVRKLMRDRGT--WEKLL 484

Query: 667 VGLAQHGNGEETLKLFEDMK 686
             +   G    T  +  DM+
Sbjct: 485 QRMKLKGYVPNTSVVLLDME 504



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 28/269 (10%)

Query: 32  PSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT 91
           P+ ++SL  F +   F  S        +L+      D+  GK  H  +       + FL 
Sbjct: 94  PADAISL--FYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 92  NNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA----------AYAHSGEGNAENV- 140
           N ++ +Y+ CG +  AR++FDKMP RD+I+WN ++A          AY    E    NV 
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 141 ---------------TEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
                           E   LF  + ++    + +T+  +L  C   G +     +H ++
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
            + G   +  V   L+++Y K G + +A  +FD M+ER VV W  M+   A +G  E+  
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLG 274
            LF  +  +G+ P+  +   +L   S +G
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMG 360


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 175/508 (34%), Positives = 283/508 (55%), Gaps = 47/508 (9%)

Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
           D+ +W ++I GY  ++   +AL L   M     + +  T A+ +KA G       G+Q+H
Sbjct: 5   DMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 64

Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
           A  +K  +  D+ V S +LDMY +CG M  A ++F+ + + + V+W  +I+G    G+ +
Sbjct: 65  ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 124

Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLV 635
             L ++ +M+ +G     FT++ +  A + + ALEQG+ +HA++IK       FVG +++
Sbjct: 125 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 184

Query: 636 DMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
           DMYAK G++ DA  +F  +D ++ V WN+ML   AQ+G G E +  FE+M+  GV  + +
Sbjct: 185 DMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 244

Query: 696 TFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILS 755
           TF+ +L+ACS+ GLV E  + F +M+E + +EPE++HY  +VD LGRAG   +A   I  
Sbjct: 245 TFLSILTACSHGGLVKEGKQYFDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 303

Query: 756 MPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDV 815
           MP + +A++  ALLG+CR+  + + G++ A+ +  L+P D+   VLL NI+A+  QWD  
Sbjct: 304 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 363

Query: 816 TSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYV 852
              R  MK   VKK+PA                       + I+ K E +  +I++ GYV
Sbjct: 364 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 423

Query: 853 PDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------------------- 893
           P+TD+VLL V+E+E++  L YHSEK+A A+ LI+ P  + I                   
Sbjct: 424 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYI 483

Query: 894 --LSNKEPLY--ANRFHHLRDGMCPCAD 917
             +  +E +    NRFHH   G C C D
Sbjct: 484 SKVFEREIVVRDTNRFHHFSSGSCSCGD 511



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 160/296 (54%), Gaps = 10/296 (3%)

Query: 386 LRTDQFTLASVLRAS-SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
            + + FT AS+L+A+ +S   G+   +QIH   +K D   D +V +AL+D+Y R G M  
Sbjct: 37  FKPNGFTFASLLKAAGASASSGI--GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDM 94

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A  +F+  +  +  +WNA+I G+    +    L +F+ M  +G      T ++   A   
Sbjct: 95  AIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAG 154

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           +  L+QGK +HA+ +KSG  L   V + ILDMY K G+M+DA+ +F+ +   D V W +M
Sbjct: 155 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSM 214

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--- 621
           ++     G    A++ + +MR  GV  ++ TF  ++ A S    +++G+Q + +++K   
Sbjct: 215 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ-YFDMMKEHN 273

Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAMLVGLAQHGNGE 676
           L+   D +V  ++VD+  + G + DA +   +M M+ T  +W A+L     H N +
Sbjct: 274 LEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 327



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 45/313 (14%)

Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
           W   ++GY Q      A+   + M+R   + +  TF   L A   + +  +G+QIH  T+
Sbjct: 9   WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68

Query: 360 KSGFYSAVIVGNSLINMYSKMGCV------------------------------------ 383
           K  ++  V VG++L++MY++ G +                                    
Sbjct: 69  KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 128

Query: 384 -------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
                   G     FT +SV  A + +   L   K +H H IK+     +FV   ++D+Y
Sbjct: 129 MFAEMQRNGFEATHFTYSSVFSAIAGIG-ALEQGKWVHAHMIKSGERLSAFVGNTILDMY 187

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            ++GSM +A  +F++ D  DL TWN+M+  +       +A+  F  M   G  L++IT  
Sbjct: 188 AKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFL 247

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-A 555
           + + AC    ++K+GKQ      +   E ++     ++D+  + G + DA      +P  
Sbjct: 248 SILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMK 307

Query: 556 PDDVAWTTMISGC 568
           P    W  ++  C
Sbjct: 308 PTAAVWGALLGSC 320



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 105/199 (52%), Gaps = 5/199 (2%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S+L+ A +++   +G+  HA  +      D ++ + L+ MY+RCG +  A  +FD++  +
Sbjct: 46  SLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK 105

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + +SWN+++A +A  G+G          +F  ++ +    +  T + +       G +  
Sbjct: 106 NGVSWNALIAGFARKGDGETT-----LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 160

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            + VH + +K G     FV   ++++Y+K G + +A+ +FD + ++D+V W  ML A+A+
Sbjct: 161 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQ 220

Query: 238 NGFGEEVFHLFVDLHRSGL 256
            G G E    F ++ + G+
Sbjct: 221 YGLGREAVTHFEEMRKCGV 239



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 34/269 (12%)

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           M  RD+ SW S++A YA +   +         L    +      +  T A LLK   +S 
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFK-----PNGFTFASLLKAAGASA 55

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
                E +H   +K     D +V  AL+++Y++ G++  A  +FD ++ ++ V W  ++ 
Sbjct: 56  SSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIA 115

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE------------EQV 281
            +A  G GE    +F ++ R+G      +   V   I+ +G   +            E++
Sbjct: 116 GFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL 175

Query: 282 QAY-----------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
            A+                 A K+  + +  ++V WN  L+ + Q G    A+  F  M 
Sbjct: 176 SAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMR 235

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           +  V  + +TFL  L A +    +  G+Q
Sbjct: 236 KCGVHLNQITFLSILTACSHGGLVKEGKQ 264



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 5/139 (3%)

Query: 37  SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
           +LL F +       ++   + S+         L  GK  HA ++ S +    F+ N ++ 
Sbjct: 126 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 185

Query: 97  MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
           MY++ GS++ AR++FD +  +DL++WNS+L A+A  G G  E VT     F  +R+    
Sbjct: 186 MYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGR-EAVTH----FEEMRKCGVH 240

Query: 157 TSRLTLAPLLKLCLSSGYV 175
            +++T   +L  C   G V
Sbjct: 241 LNQITFLSILTACSHGGLV 259


>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 174/455 (38%), Positives = 254/455 (55%), Gaps = 48/455 (10%)

Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA--PDDVAWTTMISGC 568
           G+  H   MK GFE D+ + +G+LD Y K G + +A+++F+++     + V W TMIS  
Sbjct: 49  GEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAY 108

Query: 569 VDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
           V  GE   A+S++ QM+   V P E T   L+ A + L AL+ G  IH  +       D 
Sbjct: 109 VQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDV 168

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAH 688
            +G +L+DMY KCG +E A  +F  +  +N   WN+++VGL  +G GEE +  F  M+  
Sbjct: 169 VLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKE 228

Query: 689 GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKE 748
           G++PD VTF+G+LS CS++GL+S     F  M   YG+EP VEHY  +VD LGRAG  KE
Sbjct: 229 GIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKE 288

Query: 749 AGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAA 808
           A ELI +MP + ++ +  +LL AC++  DT+ G+ V ++L+ L+P D   YV LSN++A+
Sbjct: 289 ALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYAS 348

Query: 809 ANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKR 845
            ++WDDV + R  M ++ V K P                          I A ++ + K 
Sbjct: 349 LSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKE 408

Query: 846 IKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE------- 898
           +K  G+VP+T  VL D+EEEEKE A+ YHSE++A A+GL+STPP   I   K        
Sbjct: 409 LKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDC 468

Query: 899 ----PLYAN------------RFHHLRDGMCPCAD 917
                L +N            RFHH R+G C C D
Sbjct: 469 HSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCND 503



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 143/303 (47%), Gaps = 17/303 (5%)

Query: 373 LINMYSKMGCVCGLRTDQF---TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
            +  YS M     LR D     T  S++  S ++     L +  H   +K     D  + 
Sbjct: 14  FLGFYSGM-----LRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQ 68

Query: 430 TALIDVYCRNGSMAEAEYLFEN--KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           T L+D Y ++G + EA  LF+N  +   +  TWN MI  Y+       A+ +F  M +  
Sbjct: 69  TGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSEN 128

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            +  E+T+ + + AC  L  L  G+ +H Y      ++D+ + + ++DMY KCGA+  A 
Sbjct: 129 VKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAI 188

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +   +   W ++I G   NG  + A++ +  M   G+ PD  TF  ++   S   
Sbjct: 189 DVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 248

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
            L  G++  + ++ +    +P V     +VD+  + G +++A  L + M M+     N+M
Sbjct: 249 LLSAGQRYFSEMLGVY-GLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSM 303

Query: 666 LVG 668
           ++G
Sbjct: 304 VLG 306



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 9/211 (4%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           S + +  ILR    + +  LG++ H +I+      D  L   L+  Y++ G +  AR LF
Sbjct: 29  SKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLF 88

Query: 112 DKMPDRDL--ISWNSILAAYAHSGE-GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
           D M +R+   ++WN++++AY   GE G A        +F+ ++      + +T+  LL  
Sbjct: 89  DNMTERNSNSVTWNTMISAYVQCGEFGTA------ISMFQQMQSENVKPTEVTMVSLLSA 142

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C   G +   E +HGY     L  D  +  AL+++Y K G +  A  +F G+  +++  W
Sbjct: 143 CAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 202

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
             ++     NG GEE    F+ + + G+ PD
Sbjct: 203 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 2/133 (1%)

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L  Y  M  + V+P + +F++++++ +     + G   H  ++K+    D  +   L+D 
Sbjct: 15  LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74

Query: 638 YAKCGNIEDAYILFKQMDMR--NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSV 695
           YAK G +E+A  LF  M  R  N+V WN M+    Q G     + +F+ M++  V+P  V
Sbjct: 75  YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134

Query: 696 TFIGVLSACSYTG 708
           T + +LSAC++ G
Sbjct: 135 TMVSLLSACAHLG 147



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 49/342 (14%)

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
              S+ + + +L+ C  SG     E  H   +K+G  +D  +   L++ Y+K G + EA+
Sbjct: 26  VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEAR 85

Query: 215 FLFDGMQERDV--VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
            LFD M ER+   V W  M+ AY + G       +F  +    + P + ++  +L   + 
Sbjct: 86  NLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAH 145

Query: 273 LGK-RHEEQVQAY------AIKLLLYN----------------------NNSNVVLWNKK 303
           LG     E +  Y       I ++L N                      +  N+  WN  
Sbjct: 146 LGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSI 205

Query: 304 LSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
           + G    G    AI  F+ M +  ++ D VTF+  L+  + +  L+ GQ+         +
Sbjct: 206 IVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR---------Y 256

Query: 364 YSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL---RASSSLPEGLHLSKQIHVHAIKN 420
           +S ++    L       GC+  L      L   L   RA    P  + L   +    I  
Sbjct: 257 FSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHK 316

Query: 421 DTVADSFVSTALIDV-YCRNGSMAEAEYLFENKDGFDLATWN 461
           DT     V+  L+++  C  G+     Y+F +     L+ W+
Sbjct: 317 DTKLGEQVTQQLLELDPCDGGN-----YVFLSNLYASLSRWD 353



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 18/233 (7%)

Query: 28  YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
           Y     F  ++  F Q    +   +     S+L        L +G+  H  I       D
Sbjct: 108 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 167

Query: 88  RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
             L N L+ MY +CG+L  A  +F  +  +++  WNSI+     +G G      E    F
Sbjct: 168 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGE-----EAIAAF 222

Query: 148 RSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
             + +       +T   +L  C     LS+G  + SE +  Y L+ G+  + +  G +V+
Sbjct: 223 IVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGV--EHY--GCMVD 278

Query: 203 IYSKFGKIREAKFLFDGMQER-DVVLWKVMLRA---YAENGFGEEVFHLFVDL 251
           +  + G ++EA  L   M  + + ++   +LRA   + +   GE+V    ++L
Sbjct: 279 LLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLEL 331


>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 613

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/572 (35%), Positives = 286/572 (50%), Gaps = 62/572 (10%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           LA   RA   L +  HL  +I           D+     L+  +  +G    A  LF + 
Sbjct: 55  LAGYARALGRLADARHLFDRI--------PTPDAVSYNTLLSCHFASGDADGARRLFASM 106

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              D+ +WN M+ G   S    +A  +F  M       + ++    V    C   +   +
Sbjct: 107 PVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR----NSVSWNAMVSGFACSRDMSAAE 162

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           +    A + G   D  + + ++  Y+  G +V A   F  +P  + V+W  +++G V N 
Sbjct: 163 EWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNS 219

Query: 573 EEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
             D AL ++  M R + V P+  T + ++   S L+AL  G+QIH   +KL  S +  VG
Sbjct: 220 HADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVG 279

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            SLV MY KCG++  A  LF +M  R+ V WNAM+ G AQHG+G+E + LFE MK  GVE
Sbjct: 280 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+ +TF+ VL+AC +TGL       F  M+E YGIEP V+HYS +VD L RAG+ + A +
Sbjct: 340 PNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVD 399

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           LI SMPFE   S +  LL ACRV  + E  +  A KL+  +P  + AYV L+NI+A ANQ
Sbjct: 400 LIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQ 459

Query: 812 WDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKE 848
           WDDV+  R  MK   V K P                         LI  K+  L +R+K 
Sbjct: 460 WDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKA 519

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------- 893
            GYVPD DFVL DV+E  K + L  HSEKLA ++GLIST P   +               
Sbjct: 520 MGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNA 579

Query: 894 ------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                 + ++E +  +  RFHH R G C C D
Sbjct: 580 AKVISKIEDREIILRDTTRFHHFRGGHCSCGD 611



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 11/208 (5%)

Query: 81  NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENV 140
           N+ +  D  L   +++ Y   G++V A   F+ MP R+L+SWN+++A Y  +   +    
Sbjct: 167 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHAD---- 222

Query: 141 TEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
            +  RLFR++ RE+    +  TL+ +L  C +   +   + +H + +K+ L  +  V  +
Sbjct: 223 -DALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTS 281

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           LV++Y K G +  A  LF  M  RDVV W  M+  YA++G G+E  +LF  +   G+ P+
Sbjct: 282 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 341

Query: 260 DES-----VQCVLGVISDLGKRHEEQVQ 282
             +       C+   + D G R  E +Q
Sbjct: 342 WITFVAVLTACIHTGLCDFGIRCFEGMQ 369



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 181/486 (37%), Gaps = 126/486 (25%)

Query: 92  NNLMTMYSRC-GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           N L+  Y+R  G L  AR LFD++P  D +S+N++L+ +  SG+ +        RLF S+
Sbjct: 52  NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGAR-----RLFASM 106

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                        P+  +                     + W+  VSG      SK G +
Sbjct: 107 -------------PVRDV---------------------VSWNTMVSG-----LSKSGAV 127

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
            EAK +F  M  R+ V W  M+  +A +         F +    G   D      ++   
Sbjct: 128 EEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGY 184

Query: 271 SDLGK--RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SN 327
            D+G   +  E  +A  ++        N+V WN  ++GY++      A+  F  M+R +N
Sbjct: 185 MDIGNVVKAIEYFEAMPVR--------NLVSWNAVVAGYVKNSHADDALRLFRTMVREAN 236

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           VQ ++ T    L   +    L  G+QIH   +K      + VG SL++MY    C CG  
Sbjct: 237 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMY----CKCG-- 290

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                          L     L  ++H      D VA                       
Sbjct: 291 --------------DLSSACKLFGEMHTR----DVVA----------------------- 309

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG---- 503
                       WNAMI GY    +  +A+ LF  M   G   + IT    + AC     
Sbjct: 310 ------------WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 357

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
           C   ++  + M       G E  +   S ++D+  + G +  A  +   +P  P   A+ 
Sbjct: 358 CDFGIRCFEGMQEL---YGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYG 414

Query: 563 TMISGC 568
           T+++ C
Sbjct: 415 TLLAAC 420



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 52/337 (15%)

Query: 71  LGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           LG+   AR + +    PD    N L++ +   G    ARRLF  MP RD++SWN++++  
Sbjct: 62  LGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGL 121

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-I 188
           + SG   A    +   L   +R S+++ + ++         S     A E       K  
Sbjct: 122 SKSG---AVEEAKAVFLAMPVRNSVSWNAMVS-----GFACSRDMSAAEEWFRNAPEKGD 173

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            ++W   VSG     Y   G + +A   F+ M  R++V W  ++  Y +N   ++   LF
Sbjct: 174 AVLWTAMVSG-----YMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLF 228

Query: 249 VDLHR-SGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN------------- 293
             + R + + P+  ++  VL   S+L      +Q+  + +KL L  N             
Sbjct: 229 RTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCK 288

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            +VV WN  +SGY Q GD   AI  F  M    V+ + +TF+  
Sbjct: 289 CGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAV 348

Query: 339 LAAVAGTDNLNLG-------QQIHGTTLKSGFYSAVI 368
           L A   T   + G       Q+++G   +   YS ++
Sbjct: 349 LTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMV 385


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 198/608 (32%), Positives = 309/608 (50%), Gaps = 54/608 (8%)

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
           G+  GA++   ++    +    V +   L         N G QIH   +KSG      VG
Sbjct: 97  GELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVG 156

Query: 371 NSLINMYSKMGC--------------------------------------------VCGL 386
           NSL+ +Y K+G                                               G+
Sbjct: 157 NSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGV 216

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
             + FTL++V++A S L + L L +  H   +     ++  +++ALID++ RN ++ +A 
Sbjct: 217 EPNAFTLSAVIKACSELGD-LKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDAR 275

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS-GERLDEITIATAVKACGCL 505
            LF+     D   W ++I     ++   +AL  F  M    G   D  T  T + ACG L
Sbjct: 276 QLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNL 335

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             LKQGK++HA  + +GF  ++ V S ++DMY KCG++ ++Q IF+ +P  + V+W+ ++
Sbjct: 336 GRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALL 395

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
            G   NG+    + I+ +M       D + F  +++  + L A+ QG+++H   I+    
Sbjct: 396 GGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGW 451

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
            D  V  +LVD+YAKCG IE A  +F QM +RN + WN+M+ G AQ+G GEE L++F  M
Sbjct: 452 RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQM 511

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              G++PD ++FIG+L ACS+ GLV E  E F  M + YGI+  +EHYS +VD LGRAG 
Sbjct: 512 VKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGL 571

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
            +EA  LI +  F   +S+  ALLGAC    + E  + +A+++M LEP    +YVLL+N+
Sbjct: 572 LEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANV 631

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPADLIFAKVEGLIKRIK-EGGYVP-DTDFVLLDVE 863
           + A  +W+D    R  MK + V K P          L      E   VP +++F  LDVE
Sbjct: 632 YKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFDFENSLVPGESNF--LDVE 689

Query: 864 EEEKERAL 871
           E +  R L
Sbjct: 690 ELQMARYL 697



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 211/509 (41%), Gaps = 86/509 (16%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGS-LVYARRLFDKMPDRDLISWNSILAAYA 130
           G   HA ++ S    DRF+ N+L+T+Y + G+     R++FD +  +D+ISW S+++ Y 
Sbjct: 137 GLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYV 196

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
             G+           LF  +       +  TL+ ++K C   G +      HG  L  G 
Sbjct: 197 RVGK-----PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGF 251

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             +  ++ AL++++ +   + +A+ LFD + E D + W  ++ A   N F +E    F  
Sbjct: 252 DSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYS 311

Query: 251 LHRS-GLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNN-------------- 294
           + R  G+CPD  +   VL    +LG+ +  ++V A  I      N               
Sbjct: 312 MQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCG 371

Query: 295 --------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
                          N V W+  L GY Q GD    I+ F    R   + D   F   L 
Sbjct: 372 SVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIF----RKMEKVDLYCFGTILR 427

Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLR 398
             AG   +  G+++H   ++ G +  VIV ++L+++Y+K GC+   +T  DQ  + +++ 
Sbjct: 428 TCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLIT 487

Query: 399 ASSSL---------PEGLHLSKQIHVHAIKNDTVA------------------DSFVS-- 429
            +S +          E L +  Q+    IK D ++                  + F+S  
Sbjct: 488 WNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMT 547

Query: 430 ------------TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
                       + ++D+  R G + EAE L E  D  D ++  A + G   +  +++  
Sbjct: 548 KDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIA 607

Query: 478 ELFSHMHTSGE---RLDEITIATAVKACG 503
           E  +      E    L  + +A   KA G
Sbjct: 608 ERIAKRVMELEPDYHLSYVLLANVYKAVG 636



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 138/322 (42%), Gaps = 31/322 (9%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           ++++      DL LG+  H  +L      +  + + L+ M+ R  +L  AR+LFD++ + 
Sbjct: 225 AVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEP 284

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVW 176
           D I W SI++A   +     +   E  R F S+ R+        T   +L  C + G + 
Sbjct: 285 DAICWTSIISALTRN-----DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK 339

Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
             + VH   +  G   +  V  +LV++Y K G + E++ +FD M  ++ V W  +L  Y 
Sbjct: 340 QGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYC 399

Query: 237 ENGFGEEVFHLFVDLHRSGL-CPDDESVQCV-LGVISDLGKRHEEQVQA----------- 283
           +NG  + V  +F  + +  L C       C  L  +    + H + ++            
Sbjct: 400 QNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESA 459

Query: 284 ------------YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
                       YA  +       N++ WN  + G+ Q G    A+  F  M++  ++ D
Sbjct: 460 LVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPD 519

Query: 332 SVTFLVALAAVAGTDNLNLGQQ 353
            ++F+  L A +    ++ G++
Sbjct: 520 YISFIGILFACSHRGLVDEGRE 541



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 15/183 (8%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           +ILR     + +  GK  H + +      D  + + L+ +Y++CG + YA+ +FD+MP R
Sbjct: 424 TILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVR 483

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV-- 175
           +LI+WNS++  +A +G G      E  R+F  + +       ++   +L  C   G V  
Sbjct: 484 NLITWNSMIGGFAQNGRGE-----EALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 538

Query: 176 ---WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVM 231
              +       Y +K+G+   E  S  +V++  + G + EA+ L +    R D  LW  +
Sbjct: 539 GREYFISMTKDYGIKVGI---EHYS-CMVDLLGRAGLLEEAEILIETSDFRDDSSLWAAL 594

Query: 232 LRA 234
           L A
Sbjct: 595 LGA 597



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 2/183 (1%)

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV 630
           +GE   AL +   +    +      +A L++  + + A   G QIHA++IK     D FV
Sbjct: 96  SGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFV 155

Query: 631 GISLVDMYAKCG-NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           G SL+ +Y K G +  +   +F  + +++ + W +M+ G  + G    +L+LF  M A+G
Sbjct: 156 GNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYG 215

Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
           VEP++ T   V+ ACS  G +      FH +    G +      S L+D  GR     +A
Sbjct: 216 VEPNAFTLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 274

Query: 750 GEL 752
            +L
Sbjct: 275 RQL 277


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 212/736 (28%), Positives = 354/736 (48%), Gaps = 100/736 (13%)

Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVA 338
           ++  +A +LL     +N V +N  +  Y + G    ++E F    RS  V+ D  T+  A
Sbjct: 61  RLGGHARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAA 120

Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------- 383
           LAA +    L  G+ +H  ++  G    V V NSL++MY++ G +               
Sbjct: 121 LAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDD 180

Query: 384 ----------------------------CGLRTDQFTLASVLR--ASSSLPEGLHLSKQI 413
                                        G+  + F L SV++  A S  P  + ++  +
Sbjct: 181 VSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPV-MDIAAAV 239

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY------ 467
           H   +K    +D F+++A++ +Y + G+++EA  LF++    ++  +NAMI G       
Sbjct: 240 HGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAA 299

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
           + ++   +AL L+S + + G    E T ++ ++AC     ++ GKQ+H   +K  F+ D 
Sbjct: 300 VGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD 359

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
            + S ++D+Y+  G M D    F  +P  D V WT MISGCV N   + AL+++H++  +
Sbjct: 360 FIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGA 419

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           G+ PD FT + ++ A + L     G QI     K        +G S + MYA+ G++  A
Sbjct: 420 GLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAA 479

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
              F++M+  + V W+A++   AQHG   + L+ F +M    V P+ +TF+GVL+ACS+ 
Sbjct: 480 VRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHG 539

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV E  + +  M+E+Y + P ++H + +VD LGRAGR  +A   I    F     + R+
Sbjct: 540 GLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRS 599

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LL +CR+  D E G+ VA+++M L+P  S++YV L NI+  A +    +  R  MK + V
Sbjct: 600 LLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGV 659

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
           KK+P                       ++ I++K+  ++ +I +     D      D   
Sbjct: 660 KKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDK-LTATDASSTKSDDTI 718

Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVIL--------------------SNKEPLY--- 901
             ++  + +HSEKLA A GLI  P S+ I                     S K  +    
Sbjct: 719 RNEQSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRD 778

Query: 902 ANRFHHLRDGMCPCAD 917
           A RFHH RDG C CAD
Sbjct: 779 AIRFHHFRDGSCSCAD 794



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 146/596 (24%), Positives = 258/596 (43%), Gaps = 99/596 (16%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           L H  S S      + HA I+ +   P  FL N L+  Y R G   +ARRL D+MP  + 
Sbjct: 21  LHHLRSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNA 78

Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
           +S+N ++ AY+ +G+  A   T      R+ R +     R T A  L  C  +G +   +
Sbjct: 79  VSFNLLIDAYSRAGQPEASLET----FARARRSAGVRADRFTYAAALAACSRAGRLREGK 134

Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
            VH  ++  G+    FVS +LV++Y++ G + +A+ +FD   ERD V W  ++  Y   G
Sbjct: 135 AVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAG 194

Query: 240 FGEEVFHLFVDLHRSGL-------------CP-DDESVQ--------CVL--GVISD--- 272
             +++  +F  + RSG+             C   D+ V         CV+  G  SD   
Sbjct: 195 AQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFL 254

Query: 273 ----LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ----VGDN--HGAIECFVN 322
               +G   ++   + A+ L     + NVV++N  ++G  +    VG +    A+  +  
Sbjct: 255 ASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSE 314

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGC 382
           +    ++    TF   + A     ++  G+QIHG  LK  F     +G++LI++Y   GC
Sbjct: 315 VQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGC 374

Query: 383 V-------------------------------------------CGLRTDQFTLASVLRA 399
           +                                            GL+ D FT++SV+ A
Sbjct: 375 MEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNA 434

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
            +SL       +QI   A K+     + +  + I +Y R+G +  A   F+  +  D+ +
Sbjct: 435 CASLAVA-RTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVS 493

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           W+A+I  +     +  AL  F+ M  +    +EIT    + AC    ++ +G + +   M
Sbjct: 494 WSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYE-TM 552

Query: 520 KSGFELDLCVS--SGILDMYVKCGAMVDAQ-----SIFNDIPAPDDVAWTTMISGC 568
           K  + L   +   + ++D+  + G + DA+     SIF+D P    V W ++++ C
Sbjct: 553 KEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP----VIWRSLLASC 604



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 11/305 (3%)

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
           +H H ++       F+   L+  YCR G    A  L +     +  ++N +I  Y  +  
Sbjct: 36  VHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93

Query: 473 SHKALELFSHMHTS-GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +LE F+    S G R D  T A A+ AC     L++GK +HA ++  G    + VS+
Sbjct: 94  PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153

Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
            ++ MY +CG M  A+ +F+     DDV+W  ++SG V  G +D  L ++  MR SG+  
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213

Query: 592 DEFTFAILVK--ASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
           + F    ++K  A S    ++    +H  ++K    SD F+  ++V MYAK G + +A  
Sbjct: 214 NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVA 273

Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNG------EETLKLFEDMKAHGVEPDSVTFIGVLSA 703
           LFK +   N V++NAM+ GL +           E L L+ ++++ G+EP   TF  V+ A
Sbjct: 274 LFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRA 333

Query: 704 CSYTG 708
           C+  G
Sbjct: 334 CNLAG 338


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 196/623 (31%), Positives = 321/623 (51%), Gaps = 82/623 (13%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
            + IHG  +K+GF+  + V   L+N+YSK G +                           
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G     +TL  VL A SSL + +   KQ+H + IK     D+ 
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL-QSIEFGKQVHAYLIKYHIDFDTS 195

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  +L   Y +   +  A   F+     D+ +W ++I     +  + ++L  F  M + G
Sbjct: 196 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 255

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + +E T+ + + AC  +L L  G Q+H+ ++K G+   + + + I+ +Y+KCG +++AQ
Sbjct: 256 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 315

Query: 548 SIFNDIPAPDDVAWTTMISG---CVDNGEEDLA--------LSIYHQMRLSGVVPDEFTF 596
            +F  +   + V W  MI+G    +D  E+D+A        L+++ ++  SG+ PD FTF
Sbjct: 316 KLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTF 375

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           + ++   S L ALEQG QIH  +IK    +D  VG +LV MY KCG+I+ A   F +M  
Sbjct: 376 SSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 435

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           R  + W +M+ G A+HG  ++ L+LFEDM+  G++P+ VTF+GVLSACS+ GL  EA   
Sbjct: 436 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 495

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F LM+++Y I+P ++H++ L+D   R GR +EA +++  M FE + ++   L+  CR  G
Sbjct: 496 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 555

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK------- 829
            ++ G + AE+L+ L+P D   YV L N+  +A +W DV+  R  MK + V K       
Sbjct: 556 KSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWI 615

Query: 830 ---------DPADL-------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL-- 871
                     P D        ++  +E ++  +K  GY P  D V +  +EE +ER L  
Sbjct: 616 SIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIED-VEVIEKEENEERVLSS 674

Query: 872 -YYHSEKLARAYGLISTPPSSVI 893
              HSEKLA A+GL++ P ++ I
Sbjct: 675 TVLHSEKLAIAFGLLNLPTATPI 697



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 134/589 (22%), Positives = 249/589 (42%), Gaps = 136/589 (23%)

Query: 53  SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
           SS +F +L+  I  +     +  H  I+ +    D F+   L+ +YS+CG +  A ++FD
Sbjct: 58  SSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFD 117

Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
            +P R++ +W ++L  Y  +      +     +LF  + E+  + S  TL  +L  C S 
Sbjct: 118 NLPRRNVNAWTTLLTGYVQNS-----HPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
             +   + VH Y +K  + +D  +  +L + YSKF ++  A   F  ++E+DV+ W  ++
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232

Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQ-----CVLGVISDLGKRHEEQVQAYAIK 287
            +  +NG        F+D+   G+ P++ ++      C + +  DLG     Q+ + +IK
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLG----AQIHSLSIK 288

Query: 288 L-----LLYNNNS-----------------------NVVLWNKKLSGYLQVGD------- 312
           L     +L  N+                        N+V WN  ++G+ ++ D       
Sbjct: 289 LGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVA 348

Query: 313 ----NHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
                  A+  F  + RS ++ D  TF   L+  +    L  G+QIHG  +KSG  + V+
Sbjct: 349 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVV 408

Query: 369 VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
           VG +L++MY+K G             S+ +AS +  E                  + + +
Sbjct: 409 VGTALVSMYNKCG-------------SIDKASKAFLE----------------MPSRTMI 439

Query: 429 S-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           S T++I  + R+G                                S +AL+LF  M   G
Sbjct: 440 SWTSMITGFARHGL-------------------------------SQQALQLFEDMRLVG 468

Query: 488 ERLDEITIATAVKACGCL-----------LMLKQGKQMHAYAMKSGFELDLCVSSGILDM 536
            + +++T    + AC              LM KQ      Y +K   +   C    ++DM
Sbjct: 469 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQ------YNIKPVMDHFAC----LIDM 518

Query: 537 YVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           Y++ G + +A  + + +   P++  W+ +I+GC  +G+ DL      Q+
Sbjct: 519 YLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQL 567



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 111/195 (56%)

Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
           + + +H + +K+GF  DL V + ++++Y KCG M  A  +F+++P  +  AWTT+++G V
Sbjct: 76  EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 135

Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
            N    LAL ++ +M  +G  P  +T  I++ A S L ++E G+Q+HA LIK     D  
Sbjct: 136 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 195

Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
           +G SL   Y+K   +E A   FK +  ++ + W +++     +G    +L  F DM + G
Sbjct: 196 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 255

Query: 690 VEPDSVTFIGVLSAC 704
           ++P+  T   VLSAC
Sbjct: 256 MKPNEYTLTSVLSAC 270



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%)

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           + R IH +++K     D FV   LV++Y+KCG +E A+ +F  +  RN   W  +L G  
Sbjct: 76  EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 135

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           Q+ +    L+LF  M   G  P + T   VL+ACS
Sbjct: 136 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 170


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 196/623 (31%), Positives = 321/623 (51%), Gaps = 82/623 (13%)

Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
            + IHG  +K+GF+  + V   L+N+YSK G +                           
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142

Query: 384 ----------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
                            G     +TL  VL A SSL + +   KQ+H + IK     D+ 
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL-QSIEFGKQVHAYLIKYHIDFDTS 201

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  +L   Y +   +  A   F+     D+ +W ++I     +  + ++L  F  M + G
Sbjct: 202 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 261

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            + +E T+ + + AC  +L L  G Q+H+ ++K G+   + + + I+ +Y+KCG +++AQ
Sbjct: 262 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 321

Query: 548 SIFNDIPAPDDVAWTTMISG---CVDNGEEDLA--------LSIYHQMRLSGVVPDEFTF 596
            +F  +   + V W  MI+G    +D  E+D+A        L+++ ++  SG+ PD FTF
Sbjct: 322 KLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTF 381

Query: 597 AILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM 656
           + ++   S L ALEQG QIH  +IK    +D  VG +LV MY KCG+I+ A   F +M  
Sbjct: 382 SSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 441

Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
           R  + W +M+ G A+HG  ++ L+LFEDM+  G++P+ VTF+GVLSACS+ GL  EA   
Sbjct: 442 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 501

Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
           F LM+++Y I+P ++H++ L+D   R GR +EA +++  M FE + ++   L+  CR  G
Sbjct: 502 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 561

Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK------- 829
            ++ G + AE+L+ L+P D   YV L N+  +A +W DV+  R  MK + V K       
Sbjct: 562 KSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWI 621

Query: 830 ---------DPADL-------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERAL-- 871
                     P D        ++  +E ++  +K  GY P  D V +  +EE +ER L  
Sbjct: 622 SIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIED-VEVIEKEENEERVLSS 680

Query: 872 -YYHSEKLARAYGLISTPPSSVI 893
              HSEKLA A+GL++ P ++ I
Sbjct: 681 TVLHSEKLAIAFGLLNLPTATPI 703



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/641 (22%), Positives = 268/641 (41%), Gaps = 141/641 (21%)

Query: 5   LQANLKPRHKHTYVIFSSFTKDT----YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL 60
           L+    PR +H+   F    KD      +N     L+++   ++    +   SS +F +L
Sbjct: 13  LKLETHPRKRHSTASFPLNDKDKSVGFQKNHSLIQLNVVD-AEEPKLGTRIESSYYFPLL 71

Query: 61  RHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLI 120
           +  I  +     +  H  I+ +    D F+   L+ +YS+CG +  A ++FD +P R++ 
Sbjct: 72  QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVN 131

Query: 121 SWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET 180
           +W ++L  Y  +      +     +LF  + E+  + S  TL  +L  C S   +   + 
Sbjct: 132 AWTTLLTGYVQNS-----HPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 186

Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGF 240
           VH Y +K  + +D  +  +L + YSKF ++  A   F  ++E+DV+ W  ++ +  +NG 
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 246

Query: 241 GEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKL-----LL 290
                  F+D+   G+ P++ ++  VL         DLG     Q+ + +IKL     +L
Sbjct: 247 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLG----AQIHSLSIKLGYGSSIL 302

Query: 291 YNNNS-----------------------NVVLWNKKLSGYLQVGD-----------NHGA 316
             N+                        N+V WN  ++G+ ++ D              A
Sbjct: 303 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362

Query: 317 IECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINM 376
           +  F  + RS ++ D  TF   L+  +    L  G+QIHG  +KSG  + V+VG +L++M
Sbjct: 363 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 422

Query: 377 YSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDV 435
           Y+K    CG         S+ +AS +  E                  + + +S T++I  
Sbjct: 423 YNK----CG---------SIDKASKAFLE----------------MPSRTMISWTSMITG 453

Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
           + R+G                                S +AL+LF  M   G + +++T 
Sbjct: 454 FARHGL-------------------------------SQQALQLFEDMRLVGIKPNQVTF 482

Query: 496 ATAVKACGCL-----------LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV 544
              + AC              LM KQ      Y +K   +   C    ++DMY++ G + 
Sbjct: 483 VGVLSACSHAGLADEALYYFELMQKQ------YNIKPVMDHFAC----LIDMYLRLGRVE 532

Query: 545 DAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
           +A  + + +   P++  W+ +I+GC  +G+ DL      Q+
Sbjct: 533 EAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQL 573



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 119/218 (54%)

Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
           G R++       ++ C    +  + + +H + +K+GF  DL V + ++++Y KCG M  A
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
             +F+++P  +  AWTT+++G V N    LAL ++ +M  +G  P  +T  I++ A S L
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
            ++E G+Q+HA LIK     D  +G SL   Y+K   +E A   FK +  ++ + W +++
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
                +G    +L  F DM + G++P+  T   VLSAC
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 276



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%)

Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
           + R IH +++K     D FV   LV++Y+KCG +E A+ +F  +  RN   W  +L G  
Sbjct: 82  EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 141

Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
           Q+ +    L+LF  M   G  P + T   VL+ACS
Sbjct: 142 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 176


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 201/579 (34%), Positives = 281/579 (48%), Gaps = 85/579 (14%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G+R +++T   VL+A S L   +    +IH HA      +D FV TAL+D Y + G + E
Sbjct: 104 GVRPNKYTYPFVLKACSGLL-AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           A+ LF +    D+  WNAMI G  L      A++L   M   G   +  TI   +  C C
Sbjct: 163 AQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQC 222

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           LL                                       A+ IF+ +   ++V+W+ M
Sbjct: 223 LLY--------------------------------------ARKIFDVMGVRNEVSWSAM 244

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I G V +     AL I+  M+LSG+ PD  T   ++ A S L AL+ G   H  LI    
Sbjct: 245 IGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF 304

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           ++D  +  +L+DMY+KCG I  A  +F +MD  + V WNAM++G   HG G E L LF D
Sbjct: 305 ATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 364

Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
           + A G++PD +TFI +LS+CS++GLV E    F  M   + I P +EH   +VD LGRAG
Sbjct: 365 LLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAG 424

Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
              EA   I +MPFE    +  ALL ACR+  + E G+ V++K+ +L P  +  +VLLSN
Sbjct: 425 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSN 484

Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEG 841
           I++AA +WDD    R   K   +KK P                          I  K+E 
Sbjct: 485 IYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEE 544

Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY 901
           L+  +K  GY  +  FV  DVEEEEKE+ L YHSEKLA A+G+++      IL  K    
Sbjct: 545 LLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRV 604

Query: 902 -----------------------ANRFHHLRDGMCPCAD 917
                                  ANRFHH ++G C C D
Sbjct: 605 CGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGD 643



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 47/373 (12%)

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLAT 459
           S SL E    +K+IH H +KN + ADS V   L  +Y     +  A  LF+      +  
Sbjct: 21  SKSLTE----AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL 76

Query: 460 WNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAM 519
           WN +I  Y  +     A++L+  M   G R ++ T    +KAC  LL ++ G ++H++A 
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136

Query: 520 KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALS 579
             G E D+ V + ++D Y KCG +V+AQ +F+ +   D VAW  MI+GC   G  D A+ 
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQ 196

Query: 580 IYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
           +  QM+  G+ P+  T   ++    CL                              +YA
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTCQCL------------------------------LYA 226

Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
           +         +F  M +RN V W+AM+ G       +E L +F  M+  G++PD  T +G
Sbjct: 227 R--------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLG 278

Query: 700 VLSACSYTGLVSEAY--ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           VL ACS+   +   +    + ++R   G   +    + L+D   + G+   A E+   M 
Sbjct: 279 VLPACSHLAALQHGFCSHGYLIVR---GFATDTLICNALIDMYSKCGKISFAREVFNRMD 335

Query: 758 FEASASMHRALLG 770
                S +  ++G
Sbjct: 336 RHDIVSWNAMIIG 348



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 14/328 (4%)

Query: 54  SQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           + +  +L   I +  L   K  H   L ++   D  + + L  +Y  C  +V ARRLFD+
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 114 MPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG 173
           +P+  +I WN I+ AYA +G  +         L+ S+       ++ T   +LK C    
Sbjct: 69  IPNPSVILWNQIIRAYAWNGPFDG-----AIDLYHSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 174 YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
            +     +H +A   GL  D FV  ALV+ Y+K G + EA+ LF  M  RDVV W  M+ 
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
             +  G  ++   L + +   G+CP+  ++  VL            Q   YA K+     
Sbjct: 184 GCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC---------QCLLYARKIFDVMG 234

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
             N V W+  + GY+       A++ F  M  S +  D  T L  L A +    L  G  
Sbjct: 235 VRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 294

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMG 381
            HG  +  GF +  ++ N+LI+MYSK G
Sbjct: 295 SHGYLIVRGFATDTLICNALIDMYSKCG 322



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 191/409 (46%), Gaps = 25/409 (6%)

Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
           N +V+LWN+ +  Y   G   GAI+ + +M+   V+ +  T+   L A +G   +  G +
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
           IH      G  S V V  +L++ Y+K    CG+  +   L S +     +     ++   
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAK----CGILVEAQRLFSSMSHRDVVAWNAMIAG-C 185

Query: 414 HVHAIKNDTVADSFVSTALIDVYCRN-----GSMAEAEYLFENKDGFDL------ATWNA 462
            ++ + +D V    +     +  C N     G +   + L   +  FD+       +W+A
Sbjct: 186 SLYGLCDDAV--QLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSA 243

Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
           MI GY+ S+   +AL++F  M  SG   D  T+   + AC  L  L+ G   H Y +  G
Sbjct: 244 MIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 303

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           F  D  + + ++DMY KCG +  A+ +FN +   D V+W  MI G   +G    AL ++H
Sbjct: 304 FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFH 363

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFV--GISLVDMYAK 640
            +   G+ PD+ TF  L+ + S    + +GR +  + +  D S  P +   I +VD+  +
Sbjct: 364 DLLALGLKPDDITFICLLSSCSHSGLVMEGR-LWFDAMSRDFSIVPRMEHCICMVDILGR 422

Query: 641 CGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGN---GEETLKLFEDM 685
            G I++A+   + M     V +W+A+L     H N   GEE  K  + +
Sbjct: 423 AGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSL 471



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 91  TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           ++ ++ +   C  L+YAR++FD M  R+ +SW++++  Y  S     + + E   +FR +
Sbjct: 210 SSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS-----DCMKEALDIFRMM 264

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
           + S       T+  +L  C     +      HGY +  G   D  +  AL+++YSK GKI
Sbjct: 265 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 324

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
             A+ +F+ M   D+V W  M+  Y  +G G E   LF DL   GL PDD +  C+L   
Sbjct: 325 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 384

Query: 271 SDLG 274
           S  G
Sbjct: 385 SHSG 388



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 2/169 (1%)

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
           +L + ++IH + +K   ++D  V   L  +Y  C  +  A  LF ++   + +LWN ++ 
Sbjct: 23  SLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIR 82

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIE 727
             A +G  +  + L+  M   GV P+  T+  VL ACS    + +  E  H   + +G+E
Sbjct: 83  AYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-IHSHAKMFGLE 141

Query: 728 PEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
            +V   + LVD   + G   EA  L  SM      + + A++  C + G
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN-AMIAGCSLYG 189



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 32/189 (16%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G  +H  ++      D  + N L+ MYS+CG + +AR +F++M   D++SWN+++  Y  
Sbjct: 292 GFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGI 351

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
            G G      E   LF  L         +T   LL  C  SG V             G +
Sbjct: 352 HGLG-----MEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVME-----------GRL 395

Query: 192 WDEFVSG------------ALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVML---RAY 235
           W + +S              +V+I  + G I EA      M  E DV +W  +L   R +
Sbjct: 396 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 455

Query: 236 AENGFGEEV 244
                GEEV
Sbjct: 456 KNIELGEEV 464


>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
          Length = 662

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/572 (35%), Positives = 286/572 (50%), Gaps = 62/572 (10%)

Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
           LA   RA   L +  HL  +I           D+     L+  +  +G    A  LF + 
Sbjct: 104 LAGYARALGRLADARHLFDRI--------PTPDAVSYNTLLSCHFASGDADGARRLFASM 155

Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
              D+ +WN M+ G   S    +A  +F  M       + ++    V    C   +   +
Sbjct: 156 PVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR----NSVSWNAMVSGFACSRDMSAAE 211

Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
           +    A + G   D  + + ++  Y+  G +V A   F  +P  + V+W  +++G V N 
Sbjct: 212 EWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNS 268

Query: 573 EEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
             D AL ++  M R + V P+  T + ++   S L+AL  G+QIH   +KL  S +  VG
Sbjct: 269 HADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVG 328

Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
            SLV MY KCG++  A  LF +M  R+ V WNAM+ G AQHG+G+E + LFE MK  GVE
Sbjct: 329 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 388

Query: 692 PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGE 751
           P+ +TF+ VL+AC +TGL       F  M+E YGIEP V+HYS +VD L RAG+ + A +
Sbjct: 389 PNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVD 448

Query: 752 LILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
           LI SMPFE   S +  LL ACRV  + E  +  A KL+  +P  + AYV L+NI+A ANQ
Sbjct: 449 LIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQ 508

Query: 812 WDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKE 848
           WDDV+  R  MK   V K P                         LI  K+  L +R+K 
Sbjct: 509 WDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKA 568

Query: 849 GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------------- 893
            GYVPD DFVL DV+E  K + L  HSEKLA ++GLIST P   +               
Sbjct: 569 MGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNA 628

Query: 894 ------LSNKEPLYAN--RFHHLRDGMCPCAD 917
                 + ++E +  +  RFHH R G C C D
Sbjct: 629 AKVISKIEDREIILRDTTRFHHFRGGHCSCGD 660



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 11/208 (5%)

Query: 81  NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENV 140
           N+ +  D  L   +++ Y   G++V A   F+ MP R+L+SWN+++A Y  +   +    
Sbjct: 216 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHAD---- 271

Query: 141 TEGFRLFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGA 199
            +  RLFR++ RE+    +  TL+ +L  C +   +   + +H + +K+ L  +  V  +
Sbjct: 272 -DALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTS 330

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
           LV++Y K G +  A  LF  M  RDVV W  M+  YA++G G+E  +LF  +   G+ P+
Sbjct: 331 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 390

Query: 260 DES-----VQCVLGVISDLGKRHEEQVQ 282
             +       C+   + D G R  E +Q
Sbjct: 391 WITFVAVLTACIHTGLCDFGIRCFEGMQ 418



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 180/486 (37%), Gaps = 126/486 (25%)

Query: 92  NNLMTMYSRC-GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
           N L+  Y+R  G L  AR LFD++P  D +S+N++L+ +  SG+ +        RLF S+
Sbjct: 101 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGAR-----RLFASM 155

Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
                                              ++  + W+  VSG      SK G +
Sbjct: 156 ----------------------------------PVRDVVSWNTMVSG-----LSKSGAV 176

Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
            EAK +F  M  R+ V W  M+  +A +         F +    G   D      ++   
Sbjct: 177 EEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGY 233

Query: 271 SDLGK--RHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SN 327
            D+G   +  E  +A  ++        N+V WN  ++GY++      A+  F  M+R +N
Sbjct: 234 MDIGNVVKAIEYFEAMPVR--------NLVSWNAVVAGYVKNSHADDALRLFRTMVREAN 285

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           VQ ++ T    L   +    L  G+QIH   +K      + VG SL++MY    C CG  
Sbjct: 286 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMY----CKCG-- 339

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                          L     L  ++H      D VA                       
Sbjct: 340 --------------DLSSACKLFGEMHT----RDVVA----------------------- 358

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACG---- 503
                       WNAMI GY    +  +A+ LF  M   G   + IT    + AC     
Sbjct: 359 ------------WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 406

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
           C   ++  + M       G E  +   S ++D+  + G +  A  +   +P  P   A+ 
Sbjct: 407 CDFGIRCFEGMQEL---YGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYG 463

Query: 563 TMISGC 568
           T+++ C
Sbjct: 464 TLLAAC 469



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 52/337 (15%)

Query: 71  LGKSTHAR-ILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           LG+   AR + +    PD    N L++ +   G    ARRLF  MP RD++SWN++++  
Sbjct: 111 LGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGL 170

Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-I 188
           + SG   A    +   L   +R S+++ + ++         S     A E       K  
Sbjct: 171 SKSG---AVEEAKAVFLAMPVRNSVSWNAMVS-----GFACSRDMSAAEEWFRNAPEKGD 222

Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
            ++W   VSG     Y   G + +A   F+ M  R++V W  ++  Y +N   ++   LF
Sbjct: 223 AVLWTAMVSG-----YMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLF 277

Query: 249 VDLHR-SGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN------------- 293
             + R + + P+  ++  VL   S+L      +Q+  + +KL L  N             
Sbjct: 278 RTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCK 337

Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
                            +VV WN  +SGY Q GD   AI  F  M    V+ + +TF+  
Sbjct: 338 CGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAV 397

Query: 339 LAAVAGTDNLNLG-------QQIHGTTLKSGFYSAVI 368
           L A   T   + G       Q+++G   +   YS ++
Sbjct: 398 LTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMV 434


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 230/827 (27%), Positives = 387/827 (46%), Gaps = 149/827 (18%)

Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG---- 255
           ++N Y K G++ +A  LF  M  RDV  W  ++  Y ++         FV +HRSG    
Sbjct: 77  MLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSP 136

Query: 256 --------------LCPDDESVQCVLGVISDLGKRHEEQVQA-------------YAIKL 288
                         L     ++Q +LG++   G + +  V A              A +L
Sbjct: 137 NAFTFAYAMKSCGALGERSLALQ-LLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRL 195

Query: 289 LLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNL 348
            +      +   N  L GY++      A+E F +M     + D V++ + ++A++     
Sbjct: 196 FVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSM----PERDVVSWNMMVSALS----- 246

Query: 349 NLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLH 408
                      +SG     +  + +++M SK     G+R D  T  S L A + L   L 
Sbjct: 247 -----------QSGRVREAL--DMVVDMQSK-----GVRLDSTTYTSSLTACARL-SSLR 287

Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
             KQ+H   I+N    D +V++AL+++Y + G   EA+ +F +    +   W  +I G++
Sbjct: 288 WGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFL 347

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
                 +++ELF+ M      LD+  +AT +  C   + L  G+Q+H+  +KSG    + 
Sbjct: 348 QHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG--------------------- 567
           VS+ ++ MY KC  +  A+SIF  +   D V+WT+MI+                      
Sbjct: 408 VSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKN 467

Query: 568 ----------CVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
                      + +G E+  L +Y+ M     V PD  T+  L K  + L A + G QI 
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQII 527

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
              +K+    D  V  +++ MY+KCG I +A  +F  +++++ V WNAM+ G +QHG G+
Sbjct: 528 GRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGK 587

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + +++F+D+   G +PD ++++ VLS CS++GLV E    F +M+  + I P +EH+S +
Sbjct: 588 QAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCM 647

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG   EA +LI  MP + +A +  ALL AC++ G+ E  +  A+ +  L+  DS
Sbjct: 648 VDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDS 707

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------AD-------- 833
            +Y+L++ I+A A + DD    R  M+ K +KK+P               AD        
Sbjct: 708 GSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVI 767

Query: 834 LIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP---PS 890
            I  K++ L+++I   GYV             +  R+  +HSEKLA A+GL+S P   P 
Sbjct: 768 AIRKKLDELMEKIARLGYV-----------RTDSPRSEIHHSEKLAVAFGLMSLPAWMPI 816

Query: 891 SVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
            ++                  ++ +E +   A RFHH   G C C D
Sbjct: 817 HIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGD 863



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 176/705 (24%), Positives = 303/705 (42%), Gaps = 104/705 (14%)

Query: 86  PDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
           P+    N ++  Y + G L  A  LF +MP RD+ SWN++++ Y  S     +       
Sbjct: 69  PNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQS-----QQYLASLE 123

Query: 146 LFRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
            F S+ R   +  +  T A  +K C + G    +  + G   K G   D  V+ ALV+++
Sbjct: 124 SFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMF 183

Query: 205 SKFG----------KIREAKF---------------------LFDGMQERDVVLWKVMLR 233
            + G          +I+E                        LFD M ERDVV W +M+ 
Sbjct: 184 VRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVS 243

Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLL--- 289
           A +++G   E   + VD+   G+  D  +    L   + L   R  +Q+ A  I+ L   
Sbjct: 244 ALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCI 303

Query: 290 -----------------------LYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                  ++N  ++ N V W   ++G+LQ G    ++E F  M 
Sbjct: 304 DPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMR 363

Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
              +  D       ++      +L LG+Q+H   LKSG   AV+V NSLI+MY+K     
Sbjct: 364 AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKC---- 419

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
                               + L  ++ I     + D V+     T++I  + + G++A+
Sbjct: 420 --------------------DNLQSAESIFRFMNEKDIVS----WTSMITAHSQVGNIAK 455

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACG 503
           A   F+     ++ TWNAM+  YI        L +++ M +  + R D +T  T  K C 
Sbjct: 456 AREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCA 515

Query: 504 CLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT 563
            L   K G Q+    +K G  LD  V++ ++ MY KCG +++A+ +F+ +   D V+W  
Sbjct: 516 DLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 575

Query: 564 MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD 623
           MI+G   +G    A+ I+  +   G  PD  ++  ++   S    +++G+     + ++ 
Sbjct: 576 MITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVH 635

Query: 624 CSSDPFVGIS-LVDMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKL 681
             S      S +VD+  + G++ +A  L  +M M+ T  +W A+L     HGN E    L
Sbjct: 636 NISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNE----L 691

Query: 682 FEDMKAHGVE---PDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
            E    H  E   PDS +++ +    +  G   ++ +   LMR+K
Sbjct: 692 AELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 736



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 63/384 (16%)

Query: 355 HGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG--LHLSKQ 412
           HG  +  G  SAV + N+L++ Y   G                    +LP+   L L+  
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCG--------------------ALPDARRLLLTDI 66

Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
            H + I ++          +++ Y + G +++A  LF      D+A+WN ++ GY  S  
Sbjct: 67  AHPNVITHNV---------MLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQ 117

Query: 473 SHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
              +LE F  MH SG+   +  T A A+K+CG L       Q+     K G + D  V++
Sbjct: 118 YLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAA 177

Query: 532 GILDMYVKCGAM------------------------------VD-AQSIFNDIPAPDDVA 560
            ++DM+V+CG +                              VD A  +F+ +P  D V+
Sbjct: 178 ALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVS 237

Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
           W  M+S    +G    AL +   M+  GV  D  T+   + A + L++L  G+Q+HA +I
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297

Query: 621 KLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK 680
           +     DP+V  +LV++YAKCG  ++A  +F  +  RN V W  ++ G  QHG   E+++
Sbjct: 298 RNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVE 357

Query: 681 LFEDMKAHGVEPDSVTFIGVLSAC 704
           LF  M+A  +  D      ++S C
Sbjct: 358 LFNQMRAELMTLDQFALATLISGC 381



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 142/643 (22%), Positives = 250/643 (38%), Gaps = 156/643 (24%)

Query: 33  SFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
           S +L LL  +QK  F S   S    +++   +    + L      RI    + P  F  N
Sbjct: 155 SLALQLLGMVQK--FGSQDDSDVAAALVDMFVRCGTVDLASRLFVRI----KEPTIFCRN 208

Query: 93  NLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN------AENVTEGFRL 146
           +++  Y +   + +A  LFD MP+RD++SWN +++A + SG          +  ++G RL
Sbjct: 209 SMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 268

Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
                +S T+TS LT    L     S   W  + +H   ++     D +V+ ALV +Y+K
Sbjct: 269 -----DSTTYTSSLTACARL-----SSLRWGKQ-LHAQVIRNLPCIDPYVASALVELYAK 317

Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
            G  +EAK +F+ + +R+ V W V++  + ++G   E   LF  +    +  D  ++  +
Sbjct: 318 CGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATL 377

Query: 267 L-GVISD----LGKR------HEEQVQAYAI------------------KLLLYNNNSNV 297
           + G  S     LG++         Q+QA  +                   +  + N  ++
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDI 437

Query: 298 VLWNKKLSGYLQVGD---------------------------NHGAIECFVNMI-----R 325
           V W   ++ + QVG+                            HGA E  + M       
Sbjct: 438 VSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSE 497

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
            +V+ D VT++      A      LG QI G T+K G      V N++I MYSK G +  
Sbjct: 498 KDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILE 557

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
            R                           V    N  V D     A+I  Y ++G   +A
Sbjct: 558 ARK--------------------------VFDFLN--VKDIVSWNAMITGYSQHGMGKQA 589

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F++                IL                 G + D I+    +  C   
Sbjct: 590 IEIFDD----------------ILKR---------------GAKPDYISYVAVLSGCSHS 618

Query: 506 LMLKQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDV 559
            ++++GK         + +  G E   C    ++D+  + G + +A+ + +++P  P   
Sbjct: 619 GLVQEGKSYFDMMKRVHNISPGLEHFSC----MVDLLGRAGHLTEAKDLIDEMPMKPTAE 674

Query: 560 AWTTMISGCVDNGEEDLA-LSIYHQMRLSGVVPDEFTFAILVK 601
            W  ++S C  +G  +LA L+  H   L    PD  ++ ++ K
Sbjct: 675 VWGALLSACKIHGNNELAELAAKHVFELDS--PDSGSYMLMAK 715



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 129/319 (40%), Gaps = 67/319 (21%)

Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ-------- 547
           A A+++CG    L   + +H   +  G    + + + +L  Y+ CGA+ DA+        
Sbjct: 8   ADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIA 67

Query: 548 ------------------------SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
                                    +F  +PA D  +W T++SG   + +   +L  +  
Sbjct: 68  HPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVS 127

Query: 584 MRLSG-VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           M  SG   P+ FTFA  +K+   L       Q+   + K     D  V  +LVDM+ +CG
Sbjct: 128 MHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCG 187

Query: 643 NIEDA---------------------YI----------LFKQMDMRNTVLWNAMLVGLAQ 671
            ++ A                     Y+          LF  M  R+ V WN M+  L+Q
Sbjct: 188 TVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247

Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEV 730
            G   E L +  DM++ GV  DS T+   L+AC+    +    + +  ++R    I+P V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYV 307

Query: 731 EHYSFLVDALGRAGRTKEA 749
              S LV+   + G  KEA
Sbjct: 308 A--SALVELYAKCGCFKEA 324


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/581 (31%), Positives = 296/581 (50%), Gaps = 54/581 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
           G++ D FT   +++A S L        +IH   +K    +  F+S +LI +Y +      
Sbjct: 5   GIQPDNFTFPFIIKACSCLRH-FEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYEL 63

Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
           +  +F+     +  +W+A+I   +  +   +   LF  M + G R     I  A+    C
Sbjct: 64  SRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM---AC 120

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
           +   ++   ++   +++G + D  V S    M+ +CG +  A+ +F+ I + D V W T 
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           I   V       AL +  QM L G+ PD  T   +++A S L + +    +H  +I    
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGF 239

Query: 625 SSDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
             +  + +  +L+D+Y KCG++  A  +F  M  RN + W+AM+ G   HG G E L LF
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
           + MKA  V+PD +TF+ +LSACS++GLV+E +E F+ M   +G+ P  EHY+ +VD LGR
Sbjct: 300 DQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGR 358

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AG+  EA + I  MP   +A++  ALLGACR+  + +  + VA  L  L+P ++  YV+L
Sbjct: 359 AGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVIL 418

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKK-----------------------DPADLIFAKV 839
            NI+    +  +  S R  MK + VKK                          DLI++++
Sbjct: 419 YNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSEL 478

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------ 893
           E L+ RI++ GY PD +FVL DV+EE KE  LY HSEKLA  +GL++  P SVI      
Sbjct: 479 ERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNL 538

Query: 894 ---------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                          ++ +E +   A+RFHH ++G C C D
Sbjct: 539 RVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRD 579



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 180/412 (43%), Gaps = 48/412 (11%)

Query: 323 MIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-- 380
           M+R  +Q D+ TF   + A +   +   G +IH   +K G+ S V + NSLI MY K   
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 381 ------------------------GCVCGLRTDQ-FTLASVLRASSSLP-EGLHLSKQIH 414
                                    C+   R  + F+L   + +  S P  G  L+    
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120

Query: 415 VHA-----------IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
           V +           ++N    D  V +A   ++ R G +  A  LF+     DL TW   
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
           I  Y+ ++   +AL L   M   G   D IT+   ++AC  L   +    +H   + +GF
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-ITTGF 239

Query: 524 ELD--LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
             +  L V + ++D+YVKCG++  A+ +F+ +   + + W+ MISG   +G    AL+++
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK-LDCSSDPFVGISLVDMYAK 640
            QM+ S V PD  TF  ++ A S    + +G +   ++ +    +  P     +VD+  +
Sbjct: 300 DQMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGR 358

Query: 641 CGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN---GEETLKLFEDMKAH 688
            G +++A    ++M +R N  +W A+L     H N    E   +   D+  H
Sbjct: 359 AGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPH 410



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/487 (21%), Positives = 202/487 (41%), Gaps = 80/487 (16%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S LRH         G   H  ++        F++N+L+TMY +C     +R++FD+MPD+
Sbjct: 21  SCLRH------FEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDK 74

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           + +SW++I+ A         +   EGF LFR +    +  SR  +   +  C+ S     
Sbjct: 75  NAVSWSAIIGACLQD-----DRCKEGFSLFRQMLSEGSRPSRGAILNAMA-CVRSHE--E 126

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           ++ V+   ++ GL +D+ V  A   ++++ G++  A+ LFDG+  +D+V W   + AY +
Sbjct: 127 ADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVK 186

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQ--------------- 282
                E   L   +   G+ PD  ++  V+   S L       +                
Sbjct: 187 ADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLA 246

Query: 283 ---------------AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
                           YA K+       N++ W+  +SGY   G    A+  F  M +++
Sbjct: 247 VETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KAS 305

Query: 328 VQYDSVTFLVALAAVA-------GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
           V+ D +TF+  L+A +       G +  N   +  G T +   Y+ ++    ++    K+
Sbjct: 306 VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMV---DILGRAGKL 362

Query: 381 GCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS---------TA 431
              C      F     +R ++++   L  + +IH++    + VA +              
Sbjct: 363 DEAC-----DFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVI 417

Query: 432 LIDVYCRNGSMAEAE---YLFENKD-----GFDLATWNAMIFGYILSNNSHKALELFSHM 483
           L ++Y   G   EA+    L +N+      G+ +      ++ ++  + SH   +L   +
Sbjct: 418 LYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDL---I 474

Query: 484 HTSGERL 490
           ++  ERL
Sbjct: 475 YSELERL 481



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 27/249 (10%)

Query: 160 LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
            T   ++K C    +      +H   +K G     F+S +L+ +Y K  K   ++ +FD 
Sbjct: 11  FTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDE 70

Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCP-------------DDESVQCV 266
           M +++ V W  ++ A  ++   +E F LF  +   G  P               E    V
Sbjct: 71  MPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSHEEADDV 130

Query: 267 LGVISDLGKRHEEQVQAYAIKLL-----------LYNN--NSNVVLWNKKLSGYLQVGDN 313
             V+ + G   ++ VQ+ A  +            L++   + ++V W   +  Y++    
Sbjct: 131 YRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMP 190

Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNS 372
             A+     M+   +  D++T L  + A +   +  L   +HG      FY+ ++ V  +
Sbjct: 191 LEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETA 250

Query: 373 LINMYSKMG 381
           LI++Y K G
Sbjct: 251 LIDLYVKCG 259


>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 297/558 (53%), Gaps = 44/558 (7%)

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN-GSMAEA 445
           R  +F  ASV+  S+S  +G    +Q+H  A+K    +  +V   LI +YCR+ G   EA
Sbjct: 152 RPTEFAFASVI--STSGGDG-DCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGTDEA 208

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKA-CGC 504
             ++E     +L +WN MI G+ +    ++ALE+FS MH  G R D  T+       CG 
Sbjct: 209 WNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLCGM 268

Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMV-DAQSIFNDIPAPDDV-AWT 562
              L+   Q+     K+GF  ++ V +G++  Y   G  V D   IF ++    DV +WT
Sbjct: 269 GDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDVVSWT 328

Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
            +I+   +   E+ A  ++ Q     + PD   F+I++KA + L        + ++++K+
Sbjct: 329 GIIAVFAERDPEE-AFLLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQSHVLKV 387

Query: 623 DCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLF 682
               D  +  +L+   A+CG++  +   F ++  R+TV WN+ML   A HG G+E L+LF
Sbjct: 388 GFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLF 447

Query: 683 EDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
             M A   +PD  TF+ ++SACS+ G+V E  + F  M   +GI P+++HY+ +VD LGR
Sbjct: 448 SQMDA---QPDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMVDILGR 504

Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
           AGR  EA ELI  MP E  + +  ALLG CR  G+T+  K  A KL  L+P +S  Y+L+
Sbjct: 505 AGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLAAVKLKELDPNNSLGYILM 564

Query: 803 SNIFAAANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKV 839
           SNIF+    +++    R EM+RK V+K+P                        + + A++
Sbjct: 565 SNIFSTNGHFNEARLIRREMERKTVRKEPGLSWIQVGNQVHEFASGGQQHPEKEALCARL 624

Query: 840 EGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEP 899
           E L++++K+ GYVP     L D+E+E KE  LYYHSEK+A  + L+          N   
Sbjct: 625 EELVRQLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKMALVFSLM----------NAGS 674

Query: 900 LYANRFHHLRDGMCPCAD 917
           +Y+NRFHH +  +C C D
Sbjct: 675 IYSNRFHHFKAKVCSCND 692



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 197/473 (41%), Gaps = 70/473 (14%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+V W   +S Y Q G        F +M+   + +    F  A        + + G+Q+H
Sbjct: 120 NIVSWTALVSRYAQHGWPDECFRVFTDML---ICHRPTEFAFASVISTSGGDGDCGRQVH 176

Query: 356 GTTLKSGFYSAVIVGNSLI--------------NMYSKMG----------------CVCG 385
              +K+ F S V VGN LI              N+Y  MG                C CG
Sbjct: 177 ALAVKTSFDSCVYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCG 236

Query: 386 --------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
                         +R D+ TL ++      + +GL    Q+     K   +++  V T 
Sbjct: 237 NRALEIFSQMHFGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTG 296

Query: 432 LIDVYCR-NGSMAEAEYLFENKDGF-DLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
           L+  Y    G + +   +F   DG  D+ +W  +I       +  +A  LF         
Sbjct: 297 LVKAYSSLGGEVNDCYRIFLELDGRQDVVSWTGII-AVFAERDPEEAFLLFRQFLRECLA 355

Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
            D    +  +KAC  L        + ++ +K GFE D+ +++ ++    +CG++  ++  
Sbjct: 356 PDRHMFSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQA 415

Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
           F+ I + D V+W +M+     +G+   AL ++ QM      PD  TF  L+ A S    +
Sbjct: 416 FDKIGSRDTVSWNSMLKAYAMHGQGKEALQLFSQMDAQ---PDGATFVALISACSHAGMV 472

Query: 610 EQGRQI-------HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
           E+G +I       H  + +LD  +       +VD+  + G I +A  L  +M M  ++++
Sbjct: 473 EEGAKIFEAMSNNHGIVPQLDHYA------CMVDILGRAGRIYEAKELIDKMPMEPDSMV 526

Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEP-DSVTFIGVLSACSYTGLVSEA 713
           W+A+L G  +H  GE        +K   ++P +S+ +I + +  S  G  +EA
Sbjct: 527 WSALLGGCRKH--GETKFAKLAAVKLKELDPNNSLGYILMSNIFSTNGHFNEA 577



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 121/549 (22%), Positives = 209/549 (38%), Gaps = 120/549 (21%)

Query: 72  GKSTHARIL--NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAY 129
           G + H  +L  N +   + FLTN+++ MY++CG L YA + FD+M +R+++SW ++++ Y
Sbjct: 72  GPALHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRY 131

Query: 130 AHSGEGNAENVTEGFRLFRSL-----RESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
           A  G  +     E FR+F  +          F S ++         S G       VH  
Sbjct: 132 AQHGWPD-----ECFRVFTDMLICHRPTEFAFASVIS--------TSGGDGDCGRQVHAL 178

Query: 185 ALKIGLVWDEFVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           A+K       +V   L+ +Y +  G   EA  +++ M  R++V W  M+  +   G G  
Sbjct: 179 AVKTSFDSCVYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNR 238

Query: 244 VFHLFVDLHRSG--------------LCPDDESVQCVL-------------------GVI 270
              +F  +H  G              LC   + ++C                     G++
Sbjct: 239 ALEIFSQMHFGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLV 298

Query: 271 SDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
                   E    Y I L L +   +VV W   ++ + +  D   A   F   +R  +  
Sbjct: 299 KAYSSLGGEVNDCYRIFLEL-DGRQDVVSWTGIIAVFAER-DPEEAFLLFRQFLRECLAP 356

Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQ 390
           D   F + L A AG         +    LK GF   +++ N+LI+  ++ G V       
Sbjct: 357 DRHMFSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVA------ 410

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFE 450
                             LSKQ        DTV+      +++  Y  +G   E      
Sbjct: 411 ------------------LSKQAFDKIGSRDTVS----WNSMLKAYAMHGQGKE------ 442

Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
                                    AL+LFS M     + D  T    + AC    M+++
Sbjct: 443 -------------------------ALQLFSQMDA---QPDGATFVALISACSHAGMVEE 474

Query: 511 G-KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
           G K   A +   G    L   + ++D+  + G + +A+ + + +P  PD + W+ ++ GC
Sbjct: 475 GAKIFEAMSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALLGGC 534

Query: 569 VDNGEEDLA 577
             +GE   A
Sbjct: 535 RKHGETKFA 543



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 6/238 (2%)

Query: 510 QGKQMHAYAM--KSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
            G  +H + +      + +L +++ +++MY KCG +  A   F+++   + V+WT ++S 
Sbjct: 71  HGPALHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSR 130

Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
              +G  D    ++  M +    P EF FA ++  S      + GRQ+HA  +K    S 
Sbjct: 131 YAQHGWPDECFRVFTDMLICH-RPTEFAFASVISTSG--GDGDCGRQVHALAVKTSFDSC 187

Query: 628 PFVGISLVDMYAK-CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
            +VG  L+ MY + CG  ++A+ +++ M  RN V WN M+ G    G G   L++F  M 
Sbjct: 188 VYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMH 247

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
             G+  D  T + + S     G   E       +  K G   E+E  + LV A    G
Sbjct: 248 FGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLG 305


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 307/562 (54%), Gaps = 51/562 (9%)

Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
             L   +Q+H   +        +++T L+ +Y R G++ +A  + +     ++ +W AMI
Sbjct: 49  RALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMI 108

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG--KQMHAYAMKSG 522
            GY  +    +A +LF  M  +G   +E T+A+ + +C     + Q   KQ+HA+A+K  
Sbjct: 109 SGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKN 168

Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
           FEL + V S +LDMY +   + +A+ +F+ +PA D V++TT++SG    G ++ AL+++ 
Sbjct: 169 FELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFR 228

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCG 642
           Q+   G+  ++ TF++L+ A S L++++ G+Q+H  +++ +      +  SL+DMY+KCG
Sbjct: 229 QLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCG 288

Query: 643 NIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
            +  +  +F  M  R+ V WNAML+G  +HG   E ++LF  M    V+PDSVT + VL 
Sbjct: 289 KLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKVKPDSVTLLAVLL 347

Query: 703 ACSYTGLVSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEAS 761
             S+ GLV E  + F H+++E+  +    +HY  ++D LGR+G+ ++A  LI  MPF+ +
Sbjct: 348 GYSHGGLVDEGLDMFDHIVKEQSTL-LNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPT 406

Query: 762 ASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGE 821
            ++  +LLGACRV  +   G++VA+KL  +EP ++  YV+LSNI+AAA  W DV   R  
Sbjct: 407 RAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKL 466

Query: 822 MKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFV 858
           M +K V K+P                        + I  K+  +   IK  G+VPD   V
Sbjct: 467 MLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLSCV 526

Query: 859 LLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA- 902
           L DV++E+KER L  HSEKLA  +GL+STP    I   K                 +Y  
Sbjct: 527 LHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGR 586

Query: 903 -------NRFHHLRDGMCPCAD 917
                  NRFH + +G C C D
Sbjct: 587 EISLRDKNRFHLITEGACTCGD 608



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 147/279 (52%), Gaps = 5/279 (1%)

Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPD 557
           A+  C     L++G+Q+HA  + +G+   L +++ ++ MY +CGA+ DA ++ + +P  +
Sbjct: 41  AITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERN 100

Query: 558 DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG--RQI 615
            V+WT MISG   N     A  ++  M  +G  P+EFT A ++ + +    + Q   +Q+
Sbjct: 101 VVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQV 160

Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
           HA  IK +     FVG SL+DMYA+  NI++A  +F  +  R+ V +  +L G  + G  
Sbjct: 161 HAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLD 220

Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY-ENFHLMREKYGIEPEVEHYS 734
           EE L LF  +   G++ + VTF  +L+A S  GL S  Y +  H +  +  +   +   +
Sbjct: 221 EEALNLFRQLYNEGMQCNQVTFSVLLNALS--GLSSMDYGKQVHGLILRRELPFFMALQN 278

Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
            L+D   + G+   +  +  +MP  +  S +  L+G  R
Sbjct: 279 SLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGR 317



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 44/335 (13%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  HAR++ +   P  +L   L+ MY+RCG+L  A  + D MP+R+++SW ++++ Y+ 
Sbjct: 54  GRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQ 113

Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASET--VHGYALKIG 189
           +     E   E + LF  +  +    +  TLA +L  C  S  +   +   VH +A+K  
Sbjct: 114 N-----ERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKN 168

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
                FV  +L+++Y++   I+EA+ +FD +  RDVV +  +L  Y   G  EE  +LF 
Sbjct: 169 FELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFR 228

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAYAIKL-------------------- 288
            L+  G+  +  +   +L  +S L    + +QV    ++                     
Sbjct: 229 QLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCG 288

Query: 289 -LLYNNN-------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
            LLY+          +VV WN  L GY + G  +  ++ F  M    V+ DSVT L  L 
Sbjct: 289 KLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTLLAVLL 347

Query: 341 AVA-------GTDNLNLGQQIHGTTLKSGFYSAVI 368
             +       G D  +   +   T L +  Y  VI
Sbjct: 348 GYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVI 382



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 64/350 (18%)

Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
           C+    +     VH   +  G     +++  LV +Y++ G + +A  + DGM ER+VV W
Sbjct: 45  CVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSW 104

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---EQVQAYA 285
             M+  Y++N    E + LF+ + R+G  P++ ++  VL   +     H+   +QV A+A
Sbjct: 105 TAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFA 164

Query: 286 IK-------------LLLYNNNSN---------------VVLWNKKLSGYLQVGDNHGAI 317
           IK             L +Y  + N               VV +   LSGY ++G +  A+
Sbjct: 165 IKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEAL 224

Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
             F  +    +Q + VTF V L A++G  +++ G+Q+HG  L+      + + NSLI+MY
Sbjct: 225 NLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMY 284

Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVY 436
           SK G           L    R   ++PE                    S VS  A++  Y
Sbjct: 285 SKCG----------KLLYSRRVFDNMPE-------------------RSVVSWNAMLMGY 315

Query: 437 CRNGSMAEAEYLFE---NKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
            R+G   E   LF    +K   D  T  A++ GY       + L++F H+
Sbjct: 316 GRHGMAYEVVQLFRFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHI 365



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 49/320 (15%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ--Q 353
           NVV W   +SGY Q      A + F+ M+R+  + +  T    L +  G+  ++  Q  Q
Sbjct: 100 NVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQ 159

Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGCVC----------------------------- 384
           +H   +K  F   + VG+SL++MY++   +                              
Sbjct: 160 VHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGL 219

Query: 385 --------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
                         G++ +Q T + +L A S L   +   KQ+H   ++ +      +  
Sbjct: 220 DEEALNLFRQLYNEGMQCNQVTFSVLLNALSGL-SSMDYGKQVHGLILRRELPFFMALQN 278

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +LID+Y + G +  +  +F+N     + +WNAM+ GY     +++ ++LF  M     + 
Sbjct: 279 SLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKVKP 337

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG-ILDMYVKCGAMVDAQSI 549
           D +T+   +       ++ +G  M  + +K    L      G ++D+  + G +  A  +
Sbjct: 338 DSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLL 397

Query: 550 FNDIP-APDDVAWTTMISGC 568
              +P  P    W +++  C
Sbjct: 398 IQKMPFQPTRAIWGSLLGAC 417


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/636 (29%), Positives = 317/636 (49%), Gaps = 68/636 (10%)

Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
           + W   +SGY+   +   A+  F  M +   +  D     +AL A     +++ G+ +HG
Sbjct: 33  ISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHG 92

Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG-----CVC----GLRT------------------- 388
            ++K+ F ++V VG++L++MY K+G     C+      LR                    
Sbjct: 93  YSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKE 152

Query: 389 ---------------DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
                          D +T +S L+A +     L+  ++IH   +K    A SFV+  L 
Sbjct: 153 ALAYFSDMWIQKVGCDTYTFSSALKACAD-SGALNYGREIHCQTLKKGFTAVSFVANTLA 211

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y + G +     LFE+    D+ +W  +I   +       A++ F  M  +    +E 
Sbjct: 212 TMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEF 271

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T A  +  C  L  ++ G+Q+HA+ ++ G    L V++ I+ MY KC  +  A ++F  +
Sbjct: 272 TFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGL 331

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              D ++W+TMISG    G  + A      MR  G  P+EF FA ++     +  LEQG+
Sbjct: 332 SRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGK 391

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           Q+HA+++ +    +  V  +L++MY+KCG+I++A  +F + +  N V W AM+ G A+HG
Sbjct: 392 QLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHG 451

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +E + LF+ +   G+ PDSVTFI VL+ACS+ GLV   +  F+ + + + I P  +HY
Sbjct: 452 YSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY 511

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
             ++D L RAGR  +A  +I SMPF+    +   LL ACR+ GD + GK  AEK++ L+P
Sbjct: 512 GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDP 571

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFAKVEGLIKRI 846
             +  ++ L+N++AA  +W +    R  MK K V K+P        D + A V G  +  
Sbjct: 572 NCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSG-DRSH 630

Query: 847 KEGGYVPDT---------------DFVLLDVEEEEK 867
            EG Y+ D                DF+L +V+E ++
Sbjct: 631 PEGEYIYDVLDLLASQAEMHMQEMDFLLNEVQESQR 666



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 236/554 (42%), Gaps = 87/554 (15%)

Query: 100 RCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTS 158
           + G L  AR+LFDKM  RD ISW +I++ Y      N  N TE   LF  +  E      
Sbjct: 13  KTGHLNNARQLFDKMLQRDEISWTTIISGYV-----NGMNTTEALSLFSKMWVEPGLHMD 67

Query: 159 RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFD 218
              L+  LK C  +  V   E++HGY++K   V   FV  ALV++Y K GK+ E   +F 
Sbjct: 68  PFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFK 127

Query: 219 GMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG---- 274
            M  R+VV W  ++      G+ +E    F D+    +  D  +    L   +D G    
Sbjct: 128 EMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNY 187

Query: 275 --KRHEEQVQA-----------------------YAIKLLLYNNNSNVVLWNKKLSGYLQ 309
             + H + ++                        Y ++L       +VV W   +   +Q
Sbjct: 188 GREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQ 247

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
           +G    A++ F  M  ++V  +  TF   ++  A    +  G+Q+H   ++ G   ++ V
Sbjct: 248 IGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSV 307

Query: 370 GNSLINMYSKM-------------------------------GC------------VCGL 386
            NS++ MYSK                                GC              G 
Sbjct: 308 ANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGP 367

Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
           R ++F  ASVL    ++   L   KQ+H H +      ++ V +ALI++Y + GS+ EA 
Sbjct: 368 RPNEFAFASVLSVCGNMAI-LEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEAS 426

Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
            +F+  +  ++ +W AMI GY     S +A++LF  +   G R D +T    + AC    
Sbjct: 427 KIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAG 486

Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSG----ILDMYVKCGAMVDAQSIFNDIP-APDDVAW 561
           ++  G   H +   S     +C S      ++D+  + G + DA+S+   +P   DDV W
Sbjct: 487 LVDLG--FHYFNSLSKVH-QICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVW 543

Query: 562 TTMISGCVDNGEED 575
           +T++  C  +G+ D
Sbjct: 544 STLLRACRIHGDVD 557



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 154/323 (47%), Gaps = 34/323 (10%)

Query: 58  SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
           S L+    +  L  G+  H + L        F+ N L TMY++CG L Y  RLF+ M  R
Sbjct: 174 SALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQR 233

Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
           D++SW +I+ +    G+   EN  + FR    +RE+    +  T A ++  C + G +  
Sbjct: 234 DVVSWTTIIMSNVQIGQ--EENAVKAFR---RMRETDVSPNEFTFAAVISGCATLGRIEW 288

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
            E +H + ++ GLV    V+ +++ +YSK  ++  A  +F G+  RD++ W  M+  YA+
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNNN-- 294
            G GEE F     + R G  P++ +   VL V  ++    + +Q+ A+ + + L  N   
Sbjct: 349 GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMV 408

Query: 295 --------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                     +N+V W   ++GY + G +  AI+ F  + +  +
Sbjct: 409 QSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468

Query: 329 QYDSVTFLVALAAVAGTDNLNLG 351
           + DSVTF+  LAA +    ++LG
Sbjct: 469 RPDSVTFIAVLAACSHAGLVDLG 491



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 1/184 (0%)

Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVP 591
           +L   VK G + +A+ +F+ +   D+++WTT+ISG V+      ALS++ +M +  G+  
Sbjct: 7   VLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHM 66

Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
           D F  ++ +KA     ++  G  +H   +K D  +  FVG +LVDMY K G +++  I+F
Sbjct: 67  DPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVF 126

Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
           K+M +RN V W A++ GL + G  +E L  F DM    V  D+ TF   L AC+ +G ++
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALN 186

Query: 712 EAYE 715
              E
Sbjct: 187 YGRE 190


>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/588 (32%), Positives = 286/588 (48%), Gaps = 82/588 (13%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF---DLATWNAMIFGY 467
           K IH H ++     D F ++ LI  +C + +     Y           +L  +NA+I G 
Sbjct: 34  KIIHAHMLRTHLFFDVFAASRLI-AFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGC 92

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
             S N   +   +      G   D IT    VKAC  L     G Q H  A+K GFE D 
Sbjct: 93  STSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDF 152

Query: 528 CVSSGILDMYV-------------------------------KCGAMVDAQSIFNDIPAP 556
            V + ++ MY                                +CG    A+ +F+ +P  
Sbjct: 153 YVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPER 212

Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
           + V W+TMISG   N   + A+  +  ++  GVV +E     ++ + + L AL  G + H
Sbjct: 213 NLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAH 272

Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
             +++   S +  +G ++VDMYA+CGN+E A ++F+Q+  ++ + W A++ GLA HG  E
Sbjct: 273 EYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAE 332

Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFL 736
           + L  F +M   G  P  +TF  VL+ACS+ G+V    E F  M+  +G+EP +EHY  +
Sbjct: 333 KALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCM 392

Query: 737 VDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDS 796
           VD LGRAG+ ++A + +L MP + +A + RALLGACR+  + E G+ V + L+ ++P  S
Sbjct: 393 VDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYS 452

Query: 797 SAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------ADLIFAKVE 840
             YVLLSNI+A AN+W DVT  R  MK K V+K P                 D    ++E
Sbjct: 453 GHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIE 512

Query: 841 G--------LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGL--ISTPPS 890
                    ++ +IK  GYV +T   + D++EEEKE AL+ HSEKLA AYG+  I  P  
Sbjct: 513 KIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTP 572

Query: 891 SVILSNKEPLY---------------------ANRFHHLRDGMCPCAD 917
             I+ N                           NRFHH ++G C C D
Sbjct: 573 IRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMD 620



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 5/181 (2%)

Query: 94  LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
           ++  Y RCG    AR LFD+MP+R+L++W+++++ YA +         +    F +L+  
Sbjct: 189 MIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNN-----CFEKAVETFEALQAE 243

Query: 154 ITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
               +   +  ++  C   G +   E  H Y ++  L  +  +  A+V++Y++ G + +A
Sbjct: 244 GVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKA 303

Query: 214 KFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL 273
             +F+ + E+DV+ W  ++   A +G+ E+    F ++ + G  P D +   VL   S  
Sbjct: 304 VMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHA 363

Query: 274 G 274
           G
Sbjct: 364 G 364



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 105/501 (20%), Positives = 187/501 (37%), Gaps = 111/501 (22%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMT--MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  HA +L +    D F  + L+   + S    L YA R+  ++ + +L  +N+++    
Sbjct: 34  KIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALI---- 89

Query: 131 HSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
             G   +EN    F  + ++LR  +     +T   L+K C            HG A+K G
Sbjct: 90  -RGCSTSENPENSFHYYIKALRFGL-LPDNITHPFLVKACAQLENAPMGMQTHGQAIKHG 147

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
              D +V  +LV++Y+  G I  A+ +F  M   DVV W  M+  Y              
Sbjct: 148 FEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGY-------------- 193

Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
             HR   C D +S +       +L  R  E+               N+V W+  +SGY +
Sbjct: 194 --HR---CGDAKSAR-------ELFDRMPER---------------NLVTWSTMISGYAR 226

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
                 A+E F  +    V  +    +  +++ A    L +G++ H   +++     +I+
Sbjct: 227 NNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLIL 286

Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
           G ++++MY++ G           +   +     LPE                        
Sbjct: 287 GTAVVDMYARCG----------NVEKAVMVFEQLPEK----------------------- 313

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
               DV C                      W A+I G  +   + KAL  FS M   G  
Sbjct: 314 ----DVLC----------------------WTALIAGLAMHGYAEKALWYFSEMAKKGFV 347

Query: 490 LDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
             +IT    + AC    M+++G ++  +     G E  L     ++D+  + G +  A+ 
Sbjct: 348 PRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEK 407

Query: 549 IFNDIPA-PDDVAWTTMISGC 568
               +P  P+   W  ++  C
Sbjct: 408 FVLKMPVKPNAPIWRALLGAC 428



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 32/200 (16%)

Query: 69  LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
           L +G+  H  ++ +    +  L   ++ MY+RCG++  A  +F+++P++D++ W +++A 
Sbjct: 265 LAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAG 324

Query: 129 YAHSGEGN------AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
            A  G         +E   +GF     +   ITFT+ LT       C  +G V       
Sbjct: 325 LAMHGYAEKALWYFSEMAKKGF-----VPRDITFTAVLT------ACSHAGMV-----ER 368

Query: 183 GYALKIGLVWDEFVS------GALVNIYSKFGKIREA-KFLFDGMQERDVVLWKVML--- 232
           G  +   +  D  V       G +V++  + GK+R+A KF+     + +  +W+ +L   
Sbjct: 369 GLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGAC 428

Query: 233 RAYAENGFGEEVFHLFVDLH 252
           R +     GE V  + +++ 
Sbjct: 429 RIHKNVEVGERVGKILLEMQ 448


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 291/572 (50%), Gaps = 68/572 (11%)

Query: 407 LHLSKQIH--VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
           L   KQ+H  V  +  D +    V  ++ID+Y + G + EA  +F      ++ +WNAMI
Sbjct: 20  LDQGKQVHGVVEKLGFDVIX--VVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMI 77

Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
            GY    N  +AL LF  M   GE  D  T ++++KAC C     +G Q+HA  ++ GF 
Sbjct: 78  AGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFP 137

Query: 525 L--DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
                 V+  ++D+YVKC  M +A+ +F+ I     ++W+T+I G         A+ ++ 
Sbjct: 138 YLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFR 197

Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF------VGISLVD 636
           ++R S    D F  + ++   +    LEQG+Q+HA  IK+     P+      V  S++D
Sbjct: 198 ELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKV-----PYGLLEMSVANSVLD 252

Query: 637 MYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
           MY KCG   +A  LF++M  RN V W  M+ G  +HG G + ++LF +M+ +G+EPDSVT
Sbjct: 253 MYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVT 312

Query: 697 FIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
           ++ VLSACS++GL+ E  + F ++     I+P+VEHY+ +VD LGR GR KEA  LI  M
Sbjct: 313 YLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKM 372

Query: 757 PFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVT 816
           P + +  + + LL  CR+ GD E GK V E L+  E  + + YV++SN++A A  W +  
Sbjct: 373 PLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESE 432

Query: 817 SARGEMKRKNVKK---------DPADLIFAKVEG--------------LIKRIKEG-GYV 852
             R  +KRK +KK         D    IF   +G              + KR+KE  GYV
Sbjct: 433 KIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYV 492

Query: 853 PDTDFVLLDVEEEEKERALYYHSEKLARAYGLIST----PPSSVILSNKEPLY------- 901
              +F L DVEEE K  +L  HSEKLA    L+          VI   K           
Sbjct: 493 HSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAF 552

Query: 902 ----------------ANRFHHLRDGMCPCAD 917
                           ANRFH   +G+C C D
Sbjct: 553 IKGLSKVLKIAFVVRDANRFHRFENGLCSCGD 584



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 193/380 (50%), Gaps = 55/380 (14%)

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------------CG 385
           L+ G+Q+HG   K GF    +VGNS+I+MYSK G V                       G
Sbjct: 20  LDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAG 79

Query: 386 LRTDQ-----FTLASVLRASSSLPEGLHLSK---------------QIHVHAIKND--TV 423
              ++       L   +R    +P+G   S                QIH   I++    +
Sbjct: 80  YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYL 139

Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
           A S V+ AL+D+Y +   MAEA  +F+  +   + +W+ +I GY   +N  +A++LF  +
Sbjct: 140 AQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFREL 199

Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE-LDLCVSSGILDMYVKCGA 542
             S  R+D   +++ +       +L+QGKQMHAY +K  +  L++ V++ +LDMY+KCG 
Sbjct: 200 RESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGL 259

Query: 543 MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
            V+A ++F ++   + V+WT MI+G   +G  + A+ ++++M+ +G+ PD  T+  ++ A
Sbjct: 260 TVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSA 319

Query: 603 SSCLTALEQGRQIHANLIKLDCSSD---PFVG--ISLVDMYAKCGNIEDAYILFKQMDMR 657
            S    +++G++  + L    CS+    P V     +VD+  + G +++A  L ++M ++
Sbjct: 320 CSHSGLIKEGKKYFSIL----CSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLK 375

Query: 658 -NTVLWNAMLVGLAQHGNGE 676
            N  +W  +L     HG+ E
Sbjct: 376 PNVGIWQTLLSVCRMHGDVE 395



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 142/260 (54%), Gaps = 8/260 (3%)

Query: 502 CGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAW 561
           C    +L QGKQ+H    K GF++   V + ++DMY KCG + +A  +FN +P  + ++W
Sbjct: 14  CSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISW 73

Query: 562 TTMISGCVD--NGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANL 619
             MI+G  +  NGEE  AL+++ +MR  G VPD +T++  +KA SC  A  +G QIHA L
Sbjct: 74  NAMIAGYTNERNGEE--ALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAAL 131

Query: 620 IK--LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
           I+      +   V  +LVD+Y KC  + +A  +F +++ ++ + W+ +++G AQ  N +E
Sbjct: 132 IRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKE 191

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSFL 736
            + LF +++      D      ++   +   L+ +  + + + ++  YG+  E+   + +
Sbjct: 192 AMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LEMSVANSV 250

Query: 737 VDALGRAGRTKEAGELILSM 756
           +D   + G T EA  L   M
Sbjct: 251 LDMYMKCGLTVEADALFREM 270



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 156/335 (46%), Gaps = 38/335 (11%)

Query: 52  SSSQWFSILRHAISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRL 110
           S S+  + + +  S   LL  GK  H  +          + N+++ MYS+CG +  A R+
Sbjct: 2   SESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARV 61

Query: 111 FDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
           F+ +P R++ISWN+++A Y      N  N  E   LFR +RE        T +  LK C 
Sbjct: 62  FNTLPVRNVISWNAMIAGYT-----NERNGEEALNLFREMREKGEVPDGYTYSSSLKACS 116

Query: 171 SSGYVWASETVHGYALKIGLVW--DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
            +        +H   ++ G  +     V+GALV++Y K  ++ EA+ +FD ++E+ V+ W
Sbjct: 117 CADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSW 176

Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK 287
             ++  YA+    +E   LF +L  S    D   +  ++GV +D     + +Q+ AY IK
Sbjct: 177 STLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIK 236

Query: 288 -----LLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAIE 318
                L +   NS                        NVV W   ++GY + G  + A+E
Sbjct: 237 VPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVE 296

Query: 319 CFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
            F  M  + ++ DSVT+L  L+A + +  +  G++
Sbjct: 297 LFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKK 331



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 55/336 (16%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           NV+ WN  ++GY    +   A+  F  M       D  T+  +L A +  D    G QIH
Sbjct: 69  NVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIH 128

Query: 356 GTTLKSGF--YSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASV--------------- 396
              ++ GF   +   V  +L+++Y K   +   R   D+    SV               
Sbjct: 129 AALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDN 188

Query: 397 ----------LRASSSLPEGLHLS---------------KQIHVHAIKND-TVADSFVST 430
                     LR S    +G  LS               KQ+H + IK    + +  V+ 
Sbjct: 189 LKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVAN 248

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
           +++D+Y + G   EA+ LF      ++ +W  MI GY      +KA+ELF+ M  +G   
Sbjct: 249 SVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEP 308

Query: 491 DEITIATAVKACGCLLMLKQGKQMHAY-----AMKSGFELDLCVSSGILDMYVKCGAMVD 545
           D +T    + AC    ++K+GK+  +       +K   E   C    ++D+  + G + +
Sbjct: 309 DSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYAC----MVDLLGRGGRLKE 364

Query: 546 AQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSI 580
           A+++   +P   +V  W T++S C  +G+ ++   +
Sbjct: 365 AKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQV 400


>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/578 (33%), Positives = 300/578 (51%), Gaps = 52/578 (8%)

Query: 391 FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY--- 447
             L +V+ A  S+     L  QIH H I+   +    VS   +     +G + +A Y   
Sbjct: 1   MALETVISAIKSVSHKTRL-LQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQR 59

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
            F       ++ +N MI    +S++  K L L+  M   G   D ++ + AVK+C   L 
Sbjct: 60  FFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLY 119

Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
           L  G Q+H    K G + D  + + ++D+Y  C    DA  +F+++P  D VAW  MIS 
Sbjct: 120 LPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISC 179

Query: 568 CVDNGEEDLALSIYHQMRLSG--VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
           C+ N     ALS++  M+ S     PD+ T  +L++A + L ALE G +IH  +++    
Sbjct: 180 CIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYR 239

Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
               +  SL+ MY++CG ++ AY +FK M  +N V W+AM+ GLA +G G E ++ FE+M
Sbjct: 240 DALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEM 299

Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
              GV PD  TF GVLSACSY+G+V E    FH M  ++G+ P V HY  +VD LGRAG 
Sbjct: 300 LRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGL 359

Query: 746 TKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
             +A +LI+SM  +  ++M R LLGACR+ G    G+ V   L+ L+  ++  YVLL NI
Sbjct: 360 LDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNI 419

Query: 806 FAAANQWDDVTSARGEMKRKNVKKDPA----------------DL-------IFAKVEGL 842
           +++A  W+ V   R  MK K+++  P                 D+       I+  ++ +
Sbjct: 420 YSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEI 479

Query: 843 IKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI--------- 893
             +++  GYV +    L  ++++EK   L +HSEKLA A+G+++TPP +++         
Sbjct: 480 NHQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVC 539

Query: 894 ------------LSNKEPLYA--NRFHHLRDGMCPCAD 917
                       + N++ +    NRFHH R G C C+D
Sbjct: 540 VDCHNFLKLFSGVYNRDVVLRDHNRFHHFRGGRCSCSD 577



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 7/202 (3%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G   H  I       D  L   +M +YS C     A ++FD+MP RD ++WN +++    
Sbjct: 123 GVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIR 182

Query: 132 SGEGNAENVTEGFRLFRSLRESI--TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
           +         +   LF  ++ S        +T   LL+ C     +   E +HGY ++ G
Sbjct: 183 NNR-----TRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERG 237

Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
                 +  +L+++YS+ G + +A  +F GM  ++VV W  M+   A NG+G E    F 
Sbjct: 238 YRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFE 297

Query: 250 DLHRSGLCPDDESVQCVLGVIS 271
           ++ R G+ PDD++   VL   S
Sbjct: 298 EMLRIGVLPDDQTFTGVLSACS 319



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 102/471 (21%), Positives = 188/471 (39%), Gaps = 67/471 (14%)

Query: 76  HARILNSSQIPDRFLTNNLMTMYSRCGSL---VYARRLFDKMPDRDLISWNSILAAYAHS 132
           HA I+ ++ I    ++   ++  +  G L    Y++R F ++    +  +N+++ A + S
Sbjct: 23  HAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSHPLVSHYNTMIRACSMS 82

Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
                ++  +G  L+R +R        L+ +  +K C+   Y+     VH    K G  W
Sbjct: 83  -----DSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQW 137

Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
           D  +  A++++YS   +  +A  +FD M  RD V W VM+     N    +   LF  + 
Sbjct: 138 DTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQ 197

Query: 253 RSGLCPDDESVQCVL------------------GVISDLGKRH-----EEQVQAY----- 284
            S    + + V C+L                  G I + G R         +  Y     
Sbjct: 198 GSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGC 257

Query: 285 ---AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
              A ++     N NVV W+  +SG    G    AIE F  M+R  V  D  TF   L+A
Sbjct: 258 LDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSA 317

Query: 342 VAGTDNLNLGQQ-IHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRAS 400
            + +  ++ G    H  + + G    V     ++++  + G +   +  Q  ++ V++  
Sbjct: 318 CSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLL--DKAYQLIMSMVVKPD 375

Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVS---------TALIDVYCRNG---SMAEAEYL 448
           S++   L  + +IH H    + V    +            L+++Y   G    +AE   L
Sbjct: 376 STMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKL 435

Query: 449 FENKD-----GFDLATWNAMIFGYILSNNSH-KALELFSHMHTSGERLDEI 493
            +NK      G         +  +++ + SH +  E++       E LDEI
Sbjct: 436 MKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIY-------ETLDEI 479



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 10/222 (4%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           +LSL   +Q S +           +L+     + L  G+  H  I+         L N+L
Sbjct: 189 ALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSL 248

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           ++MYSRCG L  A  +F  M +++++SW+++++  A +G G      E    F  +    
Sbjct: 249 ISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGR-----EAIEAFEEMLRIG 303

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASET-VHGYALKIGLVWDEFVSGALVNIYSKFGKIREA 213
                 T   +L  C  SG V    +  H  + + G+  +    G +V++  + G + +A
Sbjct: 304 VLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKA 363

Query: 214 KFLFDGMQER-DVVLWKVML---RAYAENGFGEEVFHLFVDL 251
             L   M  + D  +W+ +L   R +     GE V    ++L
Sbjct: 364 YQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIEL 405


>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 185/604 (30%), Positives = 308/604 (50%), Gaps = 54/604 (8%)

Query: 292 NNNSN----VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
           NN  N    +V+WN  LS Y + G+   A + F +M       D++++   ++ + G  +
Sbjct: 80  NNRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMPMK----DTISWNSRISGLLGNGD 135

Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGL 407
           + +G ++     +SG Y                      + DQ TL +VL A    PE  
Sbjct: 136 IEMGFRVFKQLYESGIY----------------------QFDQATLTTVLTACDK-PEFC 172

Query: 408 HLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGY 467
           ++SK IH          +  V  ALI  Y R G  +    +F+     ++ TW A+I G 
Sbjct: 173 YVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGL 232

Query: 468 ILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDL 527
                  ++L+LF  M       + +T  +++ AC  L  +++G+Q+H    K G   DL
Sbjct: 233 SQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDL 292

Query: 528 CVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
           C+ S ++DMY KCG++ DA  IF      D+V+ T ++ G   NG E+ ++ ++ +M  +
Sbjct: 293 CIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKN 352

Query: 588 GVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDA 647
           GVV D    + ++      T+L  G+QIH+ +IK    S+ FV   L++MY+KCG+++D+
Sbjct: 353 GVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDS 412

Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYT 707
             +F  M  RN+V WN+M+   A+HGNG   L+L+E+M+  GV P  VTF+ +L AC++ 
Sbjct: 413 IKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHV 472

Query: 708 GLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRA 767
           GLV +       M + YGI P +EHY+ +VD +GRAG   EA + I  +P +    + +A
Sbjct: 473 GLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQA 532

Query: 768 LLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
           LLGAC + G++E GK+ A +L    P   + Y+LL+NI+++  +W +      +MK   V
Sbjct: 533 LLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGV 592

Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
            K+                        A++I+  +  L K + + GYVPD  F+L  +++
Sbjct: 593 TKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKRFILYYLDQ 652

Query: 865 EEKE 868
             KE
Sbjct: 653 HGKE 656



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 225/561 (40%), Gaps = 108/561 (19%)

Query: 69  LLLGKSTHARILNSSQIPDR----------FLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
           L LG S HA I+ +    D            + N+L++MYSRCG L  A ++FD MP +D
Sbjct: 60  LHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMPMKD 119

Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLCLSSGYVWA 177
            ISWNS ++    +G+     +  GFR+F+ L ES  +   + TL  +L  C    + + 
Sbjct: 120 TISWNSRISGLLGNGD-----IEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYV 174

Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
           S+ +H      G   +  V  AL+  Y + G     + +FD M E++VV W  ++   ++
Sbjct: 175 SKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQ 234

Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN--- 293
             F EE   LF  +    + P+  +    L   S L   R   Q+     KL ++ +   
Sbjct: 235 GQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCI 294

Query: 294 -------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
                                      + V     L G  Q G    +I+ FV M+++ V
Sbjct: 295 ESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGV 354

Query: 329 QYDSVTFLVALAAVAGTD-NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
             D    + A+  V G D +L LG+QIH   +K  F S   V N LINMYSK    CG  
Sbjct: 355 VIDP-NMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSK----CGDL 409

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
            D       ++    +P+                   +S    ++I  + R+G       
Sbjct: 410 DDS------IKIFCWMPQ------------------RNSVSWNSMIAAFARHG------- 438

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                                   N  +AL+L+  M   G    ++T  + + AC  + +
Sbjct: 439 ------------------------NGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGL 474

Query: 508 LKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
           +++G   + + A   G    +   + ++DM  + G + +A+     +P  P  + W  ++
Sbjct: 475 VEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 534

Query: 566 SGCVDNGEEDLALSIYHQMRL 586
             C  +G  ++     +Q+ L
Sbjct: 535 GACSIHGNSEMGKYAANQLFL 555



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 12/297 (4%)

Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD----------LCVSSGIL 534
           TS   ++++ I+  +  CG    L  G  +HA  +K+   LD          + V + +L
Sbjct: 37  TSKFAINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLL 96

Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DE 593
            MY +CG + DA  +F+ +P  D ++W + ISG + NG+ ++   ++ Q+  SG+   D+
Sbjct: 97  SMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQ 156

Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
            T   ++ A          + IH+ +       +  VG +L+  Y +CG       +F +
Sbjct: 157 ATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDE 216

Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
           M  +N V W A++ GL+Q    EE+LKLF  M+   V+P+S+T++  L ACS    + E 
Sbjct: 217 MSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREG 276

Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
            +  H +  K G+  ++   S L+D   + G  ++A ++  S       SM   L+G
Sbjct: 277 RQ-IHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVG 332



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)

Query: 63  AISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
            I TS L LGK  H+ I+  S   + F+ N L+ MYS+CG L  + ++F  MP R+ +SW
Sbjct: 369 GIDTS-LALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSW 427

Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVH 182
           NS++AA+A  G G     +   +L+  +R    + + +T   LL  C   G V   E   
Sbjct: 428 NSMIAAFARHGNG-----SRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLV---EKGM 479

Query: 183 GYA------LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD-VVLWKVMLRAY 235
           G+         IG   + +    +V++  + G + EAK   + + E+  +++W+ +L A 
Sbjct: 480 GFLESMAKDYGIGPRMEHY--ACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGAC 537

Query: 236 AENGFGE 242
           + +G  E
Sbjct: 538 SIHGNSE 544


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 225/852 (26%), Positives = 390/852 (45%), Gaps = 94/852 (11%)

Query: 60  LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
           ++ ++   ++      H   L +  +     + +L T+YS+ G    +R LF+ + +RD+
Sbjct: 104 IKLSLEKPNIFTATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDV 163

Query: 120 ISWNSILAAYAHSGEGNA-ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
           I+WN+I++A   S E        E F+  + +++   F S   L  +  L     +    
Sbjct: 164 IAWNAIISA---SLENKCYRTAVEFFQ--KMIKDQTRFDSTTLLLVVSTLSHLKNF-GQG 217

Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR--EAKFLFDGMQERDVVLWKVMLRAYA 236
             +H  ++K G++ D  +  AL+N+Y+K G +   +++ LF+ M+ +DVV W  ++R   
Sbjct: 218 RVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCL 277

Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNNNS 295
            NG  E+    F  ++ S    D  S+ C +   S LG+    E +    IKL  Y +NS
Sbjct: 278 YNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLG-YKDNS 336

Query: 296 -------------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
                                          ++V WN  + GY    + H A +  V M 
Sbjct: 337 FVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQ 396

Query: 325 RSNV-QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY-SAVIVGNSLINMYSKMGC 382
            +   Q D VT    L   A       G+ IHG  ++       + + N LI+MYSK   
Sbjct: 397 TTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNV 456

Query: 383 V-------------------------------------------CGLRTDQFTLASVLRA 399
           V                                           CG      T+ ++L +
Sbjct: 457 VEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSS 516

Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFDLA 458
            +S    L+  K +H+  +K+  +  + +  +L+ +Y  +G +      L EN    D+A
Sbjct: 517 CNS-ANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIA 575

Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAY 517
           +WN +I G +  +   +ALE F  M        D IT+   + A   + +L QGK +H+ 
Sbjct: 576 SWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSL 635

Query: 518 AMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLA 577
           A+KS F  D  V + ++ MY +C  +  A+ +F      +   W  MIS    N E   A
Sbjct: 636 ALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREA 695

Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
           L ++  ++     P+EFT   ++ A + +  L  G+Q+H    +     + F+  +LVD+
Sbjct: 696 LELFRHLQFK---PNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDL 752

Query: 638 YAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
           Y+ CG +++A  +F+    ++   WN+M+     HGNGE+ ++LF +M   G++    TF
Sbjct: 753 YSTCGRLDNAVKVFRH-SQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTF 811

Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
           + +LSACS++GLV++  + +  M EKYGI+PE EH  ++V+ L R+GR  EA +    + 
Sbjct: 812 VSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQ 871

Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
             AS+ +   LL  C   G+ E GK VAEKL  +EP +   Y+ L+N++ AA  W D T 
Sbjct: 872 SNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATD 931

Query: 818 ARGEMKRKNVKK 829
            R  +  + ++K
Sbjct: 932 LRQYIHDQGLRK 943



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 187/735 (25%), Positives = 295/735 (40%), Gaps = 130/735 (17%)

Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
           C     A  LFDKMP R+            H  E + + V +                  
Sbjct: 72  CRCFCIAINLFDKMPQRNF-----------HVREVHFDLVVD------------------ 102

Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
                +KL L    ++ +  VH  ALK G +     S +L  +YSK G    ++ LF+ +
Sbjct: 103 ----CIKLSLEKPNIFTATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHI 158

Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
             RDV+ W  ++ A  EN         F  + +     D  ++  V+  +S L    + +
Sbjct: 159 HNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGR 218

Query: 281 V-------QAYAIKLLLYN------------NNS------------NVVLWNKKLSGYLQ 309
           V           + + L N            N+S            +VV WN  + G L 
Sbjct: 219 VIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLY 278

Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFY--SAV 367
            GD   ++  F  M  S  + D V+   A++A +    L  G+ IHG  +K G+   S V
Sbjct: 279 NGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFV 338

Query: 368 IVGNSLINMYSK-----------------------------------------------M 380
            V NSLI++YS+                                                
Sbjct: 339 SVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTT 398

Query: 381 GCVCGLRTDQFTLASVLRASSSL---PEGLHLSKQIHVHAIKNDTVADSF-VSTALIDVY 436
           GC    + D  TL ++L   + L    EG    + IH +AI+   V D   +   LID+Y
Sbjct: 399 GC---FQPDIVTLTTMLPLCAELMLYREG----RTIHGYAIRRHMVPDHLPLRNGLIDMY 451

Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
            +   + +AE LF +    DL +WNAMI GY  +    KA  LF  +   G+     T+ 
Sbjct: 452 SKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVF 511

Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
             + +C     L  GK +H + +KSGF     + + ++ MY+  G +    SI  +  + 
Sbjct: 512 AILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSI 571

Query: 557 DDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQ 614
            D+A W T+I GCV   +   AL  +  MR       D  T   ++ A + +  L QG+ 
Sbjct: 572 ADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKS 631

Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
           +H+  +K    SD  V  SL+ MY +C +I  A  +FK   + N   WN M+  L+ +  
Sbjct: 632 LHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKE 691

Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
             E L+LF  ++    +P+  T + VLSAC+  G++    +  H    +YG +      +
Sbjct: 692 SREALELFRHLQ---FKPNEFTIVSVLSACTRIGVLIHG-KQVHGYTFRYGYQQNSFISA 747

Query: 735 FLVDALGRAGRTKEA 749
            LVD     GR   A
Sbjct: 748 ALVDLYSTCGRLDNA 762



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 153/348 (43%), Gaps = 53/348 (15%)

Query: 63  AISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
           A++  +LL  GKS H+  L S    D  + N+L+TMY RC  +  AR++F      +L +
Sbjct: 619 AVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCT 678

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
           WN +++A +H+ E       E   LFR L+      +  T+  +L  C   G +   + V
Sbjct: 679 WNCMISALSHNKESR-----EALELFRHLQFK---PNEFTIVSVLSACTRIGVLIHGKQV 730

Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
           HGY  + G   + F+S ALV++YS  G++  A  +F   Q+ +   W  M+ AY  +G G
Sbjct: 731 HGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQKSESA-WNSMIAAYGNHGNG 789

Query: 242 E---EVFHLFVDL----------------HRSGLCPDDESVQCVLGVISDLGKRHEEQVQ 282
           E   E+FH   DL                  SGL   ++ +Q    ++   G + E + Q
Sbjct: 790 EKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLV--NQGLQYYECMLEKYGIKPEAEHQ 847

Query: 283 AYAIKLLL--------------YNNNSNVVLWNKKLS-----GYLQVGDNHGAIECFVNM 323
            Y + +L                 +N++  +W   LS     G L++G      E    M
Sbjct: 848 VYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKK--VAEKLFEM 905

Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL-KSGFYSAVIVG 370
              NV Y      + +AA +  D  +L Q IH   L K   YS + VG
Sbjct: 906 EPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRKCAGYSLIDVG 953



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 135/340 (39%), Gaps = 40/340 (11%)

Query: 52  SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
           SSS  F+IL    S + L  GKS H   L S  +    L N+LM MY   G L     + 
Sbjct: 506 SSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSIL 565

Query: 112 DKMPD-RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFT-SRLTLAPLLKLC 169
            +     D+ SWN+I+      G    +   E    F  +R+  +F    +TL  +L   
Sbjct: 566 QENSSIADIASWNTIIV-----GCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAV 620

Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
            +   +   +++H  ALK     D  V  +L+ +Y +   I  A+ +F      ++  W 
Sbjct: 621 ANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWN 680

Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR-HEEQVQAY---- 284
            M+ A + N    E   LF  L      P++ ++  VL   + +G   H +QV  Y    
Sbjct: 681 CMISALSHNKESREALELFRHLQFK---PNEFTIVSVLSACTRIGVLIHGKQVHGYTFRY 737

Query: 285 ------------------------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
                                   A+K+  ++  S    WN  ++ Y   G+   AIE F
Sbjct: 738 GYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQKSESA-WNSMIAAYGNHGNGEKAIELF 796

Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
             M    ++    TF+  L+A + +  +N G Q +   L+
Sbjct: 797 HEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLE 836


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/586 (31%), Positives = 306/586 (52%), Gaps = 54/586 (9%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           N+V +   ++GY Q G    AI  ++ M++ ++  D   F   + A A + ++ LG+Q+H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG----------------------CVCGL------- 386
              +K    S +I  N+LI MY +                         + G        
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251

Query: 387 ---------------RTDQFTLASVLRASSSL--PEGLHLSKQIHVHAIKNDTVADSFVS 429
                            +++   S L+A SSL  P+      QIH   IK++   ++   
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD---YGSQIHGLCIKSELAGNAIAG 308

Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSHMHTSG 487
            +L D+Y R G +  A  +F+  +  D A+WN +I G  L+NN +  +A+ +FS M +SG
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG--LANNGYADEAVSVFSQMRSSG 366

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
              D I++ + + A    + L QG Q+H+Y +K GF  DL V + +L MY  C  +    
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426

Query: 548 SIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
           ++F D     D V+W T+++ C+ + +    L ++  M +S   PD  T   L++    +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486

Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
           ++L+ G Q+H   +K   + + F+   L+DMYAKCG++  A  +F  MD R+ V W+ ++
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546

Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
           VG AQ G GEE L LF++MK+ G+EP+ VTF+GVL+ACS+ GLV E  + +  M+ ++GI
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606

Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
            P  EH S +VD L RAGR  EA   I  M  E    + + LL AC+ QG+    +  AE
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666

Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
            ++ ++PF+S+A+VLL ++ A++  W++    R  MK+ +VKK P 
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 257/598 (42%), Gaps = 82/598 (13%)

Query: 56  WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
           + S++    S+  L  G+  H  ILNS+   D  L N++++MY +CGSL  AR +FD MP
Sbjct: 70  YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129

Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
           +R+L+S+ S++  Y+ +G+G      E  RL+  + +      +     ++K C SS  V
Sbjct: 130 ERNLVSYTSVITGYSQNGQG-----AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184

Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
              + +H   +K+          AL+ +Y +F ++ +A  +F G+  +D++ W  ++  +
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244

Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESV--QCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
           ++ GF  E      ++   G+   +E +    +    S L   +  Q+    IK  L  N
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304

Query: 294 ----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
                                         +   WN  ++G    G    A+  F  M  
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364

Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS------- 378
           S    D+++    L A      L+ G QIH   +K GF + + V NSL+ MY+       
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424

Query: 379 -------------------------------------KMGCVCGLRTDQFTLASVLRASS 401
                                                K+  V     D  T+ ++LR   
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484

Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
            +   L L  Q+H +++K     + F+   LID+Y + GS+ +A  +F++ D  D+ +W+
Sbjct: 485 EI-SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-YAMK 520
            +I GY  S    +AL LF  M ++G   + +T    + AC  + ++++G +++A    +
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603

Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
            G        S ++D+  + G + +A+   +++   PD V W T++S C   G   LA
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 167/319 (52%), Gaps = 6/319 (1%)

Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
           LRT   +L     +S SL +G    ++IH H + ++   D+ ++  ++ +Y + GS+ +A
Sbjct: 67  LRT-YISLICACSSSRSLAQG----RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDA 121

Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
             +F+     +L ++ ++I GY  +    +A+ L+  M       D+    + +KAC   
Sbjct: 122 REVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181

Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
             +  GKQ+HA  +K      L   + ++ MYV+   M DA  +F  IP  D ++W+++I
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241

Query: 566 SGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
           +G    G E  ALS   +M   GV  P+E+ F   +KA S L   + G QIH   IK + 
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL 301

Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
           + +   G SL DMYA+CG +  A  +F Q++  +T  WN ++ GLA +G  +E + +F  
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQ 361

Query: 685 MKAHGVEPDSVTFIGVLSA 703
           M++ G  PD+++   +L A
Sbjct: 362 MRSSGFIPDAISLRSLLCA 380



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 470 SNNSHKALELFSHMH-TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
           SN   +ALE F      S  ++   T  + + AC     L QG+++H + + S  + D  
Sbjct: 44  SNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI 103

Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
           +++ IL MY KCG++ DA+ +F+ +P  + V++T++I+G   NG+   A+ +Y +M    
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED 163

Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
           +VPD+F F  ++KA +  + +  G+Q+HA +IKL+ SS      +L+ MY +   + DA 
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223

Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDSVTFIGVLSACS 705
            +F  + M++ + W++++ G +Q G   E L   ++M + GV  P+   F   L ACS
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 192/603 (31%), Positives = 287/603 (47%), Gaps = 96/603 (15%)

Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRN--GSMAEAEYLFENKDGFDLATWNAMIFGYI 468
           KQIH   IK   + +  +   ++   C    G M  A  LF+      + +WN M  GY 
Sbjct: 31  KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90

Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
                   + L+  M     + D  T     K     + L+ G+++H + +K G + ++ 
Sbjct: 91  RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVF 150

Query: 529 VSSGILDMYVKCG---------------------AMVD---------------------- 545
             + +++MY  CG                     AM+                       
Sbjct: 151 AHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNT 210

Query: 546 -----AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
                A+  F+ +P  D V+WT MI G +       AL ++ +M+ S + PDEFT   ++
Sbjct: 211 GQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVL 270

Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
            A + L ALE G  I   + K    +D FVG +L+DMY KCGN+E A  +F  +  R+  
Sbjct: 271 TACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKF 330

Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
            W AM+VGLA +G GEE L +F  M    V PD VT++GVLSAC++TG+V E  + F  M
Sbjct: 331 TWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASM 390

Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTET 780
             ++GIEP + HY  +VD LG+AG  KEA E+I +MP + ++ +  ALLGACR+  D E 
Sbjct: 391 TARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEM 450

Query: 781 GKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------- 832
            +   E+++ LEP + + YVL  NI+AA N+WD +   R  M  + +KK P         
Sbjct: 451 AERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNG 510

Query: 833 ---------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEK 877
                            I+ K+  +   +K  GY P+T  V LD+ EE+KE A+Y HSEK
Sbjct: 511 IVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEK 570

Query: 878 LARAYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCP 914
           LA A+GLI++ P   I                     + ++E +  +  RFHH R G C 
Sbjct: 571 LAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCS 630

Query: 915 CAD 917
           C D
Sbjct: 631 CKD 633



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 197/407 (48%), Gaps = 17/407 (4%)

Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
            YA +L       +V  WN    GY ++      +  ++ M+  NV+ D  T+       
Sbjct: 65  CYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGF 124

Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
             +  L LG+++H   +K G  S V   N+LINMYS    +CGL      +A  +   S 
Sbjct: 125 TRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYS----LCGL----IDMARGIFDMSC 176

Query: 403 LPEGLHLSKQIH-VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
             + +  +  I   + IK D ++     TA++  +   G +  A   F      D  +W 
Sbjct: 177 KSDVVTWNAMISGYNRIKKDVIS----WTAIVTGFVNTGQVDAARKYFHKMPERDHVSWT 232

Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
           AMI GY+  N   +AL LF  M TS  + DE T+ + + AC  L  L+ G+ +  Y  K+
Sbjct: 233 AMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKN 292

Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
             + D  V + ++DMY KCG +  A SIFN +P  D   WT M+ G   NG  + AL+++
Sbjct: 293 KVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMF 352

Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYA 639
            QM  + V PDE T+  ++ A +    +++G++  A++       +P +     +VD+  
Sbjct: 353 SQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARH-GIEPNIAHYGCMVDLLG 411

Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDM 685
           K G++++A+ + K M M+ N+++W A+L     H + E   +  E +
Sbjct: 412 KAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQI 458



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 119/516 (23%), Positives = 200/516 (38%), Gaps = 92/516 (17%)

Query: 73  KSTHARILNSSQIPDRFLTNNLMTMYS--RCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
           K  H+R + +  I +  + N +++       G + YAR+LFD +P+  + SWN +   Y+
Sbjct: 31  KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90

Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
                       G  L+  + E        T   L K    S  +     +H + +K GL
Sbjct: 91  RIACPKL-----GVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGL 145

Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
             + F   AL+N+YS  G I  A+ +FD   + DVV W  M+  Y  N   ++V      
Sbjct: 146 DSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY--NRIKKDVI----- 198

Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQV 310
                      S   ++    + G     QV A A K        + V W   + GYL++
Sbjct: 199 -----------SWTAIVTGFVNTG-----QVDA-ARKYFHKMPERDHVSWTAMIDGYLRL 241

Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
                A+  F  M  S ++ D  T +  L A A    L LG+ I     K+   +   VG
Sbjct: 242 NCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVG 301

Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
           N+LI+MY K G           +   L   ++LP+                         
Sbjct: 302 NALIDMYFKCG----------NVEMALSIFNTLPQ------------------------- 326

Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
                                +D F   TW AM+ G  ++    +AL +FS M  +    
Sbjct: 327 ---------------------RDKF---TWTAMVVGLAINGCGEEALNMFSQMLKASVTP 362

Query: 491 DEITIATAVKACGCLLMLKQGKQMHA-YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
           DE+T    + AC    M+ +GK+  A    + G E ++     ++D+  K G + +A  I
Sbjct: 363 DEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEI 422

Query: 550 FNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQM 584
             ++P  P+ + W  ++  C  + + ++A     Q+
Sbjct: 423 IKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQI 458



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 21/241 (8%)

Query: 4   QLQANLKPRHKHTYVIFSSFTK--DTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILR 61
           Q+ A  K  HK       S+T   D Y  L  +  +L+ F +              S+L 
Sbjct: 212 QVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLT 271

Query: 62  HAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
                  L LG+     I  +    D F+ N L+ MY +CG++  A  +F+ +P RD  +
Sbjct: 272 ACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFT 331

Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV------ 175
           W +++   A +G G      E   +F  + ++      +T   +L  C  +G V      
Sbjct: 332 WTAMVVGLAINGCGE-----EALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKF 386

Query: 176 WASETV-HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKVMLR 233
           +AS T  HG    I         G +V++  K G ++EA  +   M  + + ++W  +L 
Sbjct: 387 FASMTARHGIEPNIAHY------GCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLG 440

Query: 234 A 234
           A
Sbjct: 441 A 441


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 203/714 (28%), Positives = 337/714 (47%), Gaps = 99/714 (13%)

Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
           +V  WN  + GY + G    A+  +  M+ + ++ +  TF   L   AG  ++  G++IH
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221

Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--------------------------- 388
              ++ GF S V VGN+LI MY K G +   R                            
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281

Query: 389 DQFTLASVLRASSSLPEGL---------------HLSKQIHVHAIKNDTVADSFVSTALI 433
           +   L S++R  S  P+ +                L + +H + +K++   D  ++ +LI
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341

Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
            +Y   G + EAE +F   +  D+ +W AMI   +      KA+E +  M   G   DEI
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEI 401

Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
           T+ + + AC C+  L  G ++H  A+K+G    + VS+ ++DMY KC  + +A  +F +I
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461

Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
              + V+WT++I G   N     AL  + QM+ S + P+  T   ++ A + + AL +G+
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGK 520

Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
           +IHA+ ++     D F+  +++DMY +CG    A   F     ++   WN +L G AQ G
Sbjct: 521 EIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQG 579

Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
             +  ++LF+ M    + PD +TFI +L ACS +G+V+E  E F++M+ KY + P ++HY
Sbjct: 580 QAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHY 639

Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
           + +VD LGRAG+  +A + I  MP    A++  ALL ACR+  + E G+  A+++   + 
Sbjct: 640 ACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDN 699

Query: 794 FDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP---------------------- 831
                Y+LL N++A    WD V+  R  M+ + +  DP                      
Sbjct: 700 KSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHS 759

Query: 832 -ADLIFAKVEGLIKRIKEGGYVP-DTDFVLLDVEEEEKERALYY--HSEKLARAYGLIST 887
            +  I   ++G   ++KE G+    + F      E E  RA  +  HSE+ A A+GLI+T
Sbjct: 760 QSKEINGVLDGFCSKMKENGFGNLKSSF----TSEIESSRADIFCGHSERQAIAFGLINT 815

Query: 888 PPSSVILSNKEPLY------------------------ANRFHHLRDGMCPCAD 917
            P   I   K  LY                           +HH +DG+C C D
Sbjct: 816 APGMPIWVTKN-LYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGD 868



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 239/553 (43%), Gaps = 82/553 (14%)

Query: 90  LTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRS 149
           L N L++M+ R G+L+ A  +F KM +RD+ SWN ++  YA +G        E   L+  
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAG-----CFDEALNLYHR 188

Query: 150 LRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGK 209
           +  +    +  T   +LK C     +   + +H + ++ G   D  V  AL+ +Y K G 
Sbjct: 189 MLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248

Query: 210 IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV 269
           I  A+ LFD M +RD + W  M+  Y ENG G E   LF  +    + PD  ++  V   
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308

Query: 270 ISDL-GKRHEEQVQAYAIK-------------LLLYNN---------------NSNVVLW 300
              L  +R    V  Y +K             + +Y++               + +VV W
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSW 368

Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
              ++  +       A+E +  M    +  D +T +  L+A A   +L+LG ++H   +K
Sbjct: 369 TAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428

Query: 361 SGFYSAVIVGNSLINMYSKMGCV----------------------CGLRTDQ-------- 390
           +G  S VIV NSLI+MYSK  CV                       GLR +         
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488

Query: 391 ------------FTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCR 438
                        TL SVL A + +   L   K+IH HA++     D F+  A++D+Y R
Sbjct: 489 FRQMKESMKPNSVTLISVLSACARIG-ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVR 547

Query: 439 NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATA 498
            G    A   F N    D+  WN ++ GY     +  A+ELF  M       DEIT  + 
Sbjct: 548 CGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA- 555
           + AC    M+ +G + +   MK+ + L  +L   + ++D+  + G + DA     D+P  
Sbjct: 607 LCACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIR 665

Query: 556 PDDVAWTTMISGC 568
           PD   W  +++ C
Sbjct: 666 PDAAIWGALLNAC 678



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 154/281 (54%)

Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
           +  AL+ ++ R G++ +A Y+F      D+ +WN ++ GY  +    +AL L+  M  + 
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
            R +  T  + +K C  +  + +GK++HA+ ++ GFE D+ V + ++ MYVKCG + +A+
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253

Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
            +F+ +P  D ++W  MISG  +NG     L ++  MR   V PD  T   +  A   L 
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
               GR +H  ++K +   D  +  SL+ MY+  G +E+A  +F +M+ ++ V W AM+ 
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 668 GLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
            L  H    + ++ ++ M+  G+ PD +T + VLSAC+  G
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIG 414



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 114/190 (60%), Gaps = 2/190 (1%)

Query: 517 YAMKSGFELDLCVSSG--ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEE 574
           Y + S  +  LCV  G  +L M+V+ G ++DA  +F  +   D  +W  ++ G    G  
Sbjct: 120 YELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCF 179

Query: 575 DLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISL 634
           D AL++YH+M  + + P+ +TF  ++K  + ++ + +G++IHA++I+    SD  VG +L
Sbjct: 180 DEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNAL 239

Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
           + MY KCG+I +A +LF +M  R+ + WNAM+ G  ++G G E L+LF  M+   V+PD 
Sbjct: 240 ITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDL 299

Query: 695 VTFIGVLSAC 704
           +T   V SAC
Sbjct: 300 ITMTTVASAC 309



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 35  SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
           S   L F ++   S   +S    S+L        L+ GK  HA  L +    D FL N +
Sbjct: 482 SFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 95  MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
           + MY RCG  V A   F+    +D+ +WN +L  YA  G+           LF  + E  
Sbjct: 542 LDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKL-----AVELFDKMLELE 595

Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL---KIGLVWDEFVSGALVNIYSKFGKIR 211
                +T   LL  C  SG V  +E +  + +   K  L  +      +V+I  + G++ 
Sbjct: 596 IHPDEITFISLLCACSKSGMV--TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLD 653

Query: 212 EA-KFLFDGMQERDVVLWKVMLRA 234
           +A  F+ D     D  +W  +L A
Sbjct: 654 DAYDFIQDMPIRPDAAIWGALLNA 677


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 195/586 (33%), Positives = 315/586 (53%), Gaps = 53/586 (9%)

Query: 385 GLRTDQFTLASVLRASSSLPEG-LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
           G R D+ T + +L A + +    +   ++IH +A  +  + +  V TA+I +Y + G + 
Sbjct: 24  GERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLD 83

Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM--HTSGERLDEITIATAVKA 501
           +A   FE     +  TWNAM+  Y L     +ALELF  M   +   R D+ + + A++A
Sbjct: 84  DARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEA 143

Query: 502 CGCLLMLKQGKQMHAYAMKSGFEL--DLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDD 558
           C  L  L+QG+++H    + G EL  D+ V + +L+MY KCG + +A+ +F+ I    D 
Sbjct: 144 CSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADS 203

Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHA 617
           V W  MI+    +G    AL +Y  M   + + P + TF  ++   + L+AL+QGR IHA
Sbjct: 204 VCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHA 263

Query: 618 NLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
            +   +  ++  V  +LV MY KCG +++A  +F  M +++ + WN ++   A HG+ ++
Sbjct: 264 RVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQ 323

Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLV 737
            L L+++M   GV+P  VTF+G+LSACS+ GLV++  + F+ M++ + I+P V H+  ++
Sbjct: 324 ALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCII 383

Query: 738 DALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSS 797
           D LGR GR  EA  ++ SMP +A+A    +LLGAC+  GD + G   A++++   P+ S 
Sbjct: 384 DLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSG 443

Query: 798 AYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADL 834
            YVLLSNI+AAA +W DV   R  M  + VKK P                        + 
Sbjct: 444 GYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEE 503

Query: 835 IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI- 893
           I+ ++  +++ +K  GYVPDT  V  D+EEEEKE  L  HSEKLA  YG +  P  S++ 
Sbjct: 504 IYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLR 563

Query: 894 --------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
                               ++ ++ +   A RFH   +G C C D
Sbjct: 564 IVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRD 609



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 5/206 (2%)

Query: 571 NGEEDLALSIYHQMRLSGVVPDEFTFAILV--KASSCLTALEQGRQIHANLIKLDCSSDP 628
           NG    AL  + +M  SG  PD  TF++++   A     A++QGR+IH          + 
Sbjct: 7   NGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNV 66

Query: 629 FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM--K 686
            VG +++ MY KCG ++DA   F+++  +N+V WNAM+      G   E L+LF +M  +
Sbjct: 67  VVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCER 126

Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM-REKYGIEPEVEHYSFLVDALGRAGR 745
           +    PD  +F   + ACS    + +  E   ++ RE   +  +V   + L++   + G 
Sbjct: 127 SRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGD 186

Query: 746 TKEAGELILSMPFEASASMHRALLGA 771
            +EA ++  S+  +A +    A++ A
Sbjct: 187 LEEARKVFDSIRHDADSVCWNAMIAA 212



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/489 (20%), Positives = 188/489 (38%), Gaps = 107/489 (21%)

Query: 126 LAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY--VWASETVHG 183
           +AA++H+G       +E    FR + +S     R+T + +L      G   +     +H 
Sbjct: 1   MAAFSHNG-----CHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHR 55

Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
           YA   GL+ +  V  A++++Y K G++ +A+  F+ +Q ++ V W  M+  Y  +G   E
Sbjct: 56  YARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDRE 115

Query: 244 VFHLFVDL---HRSGLCPDDESVQCVLGVISDL----------------GKRHEEQVQAY 284
              LF ++    RS   PD  S    +   S+L                GK   + V   
Sbjct: 116 ALELFREMCERSRSAR-PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVG 174

Query: 285 AIKLLLYN----------------NNSNVVLWNKKLSGYLQVGDNHGAIECFVNM-IRSN 327
              L +Y+                ++++ V WN  ++ Y Q G    A++ + +M   ++
Sbjct: 175 TALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTD 234

Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
           +     TF+  +   A    L  G+ IH     + F + ++V N+L++MY K GC+    
Sbjct: 235 LAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCL---- 290

Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
                                            D   D F S  L D             
Sbjct: 291 ---------------------------------DEALDVFHSMKLKDEI----------- 306

Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
                      +WN +I  Y    +S +AL L+  M   G +  E+T    + AC    +
Sbjct: 307 -----------SWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGL 355

Query: 508 LKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTM 564
           +  G   + Y M+    +   V     I+D+  + G + +A+ +   +P   + V W ++
Sbjct: 356 VADGLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSL 414

Query: 565 ISGCVDNGE 573
           +  C  +G+
Sbjct: 415 LGACKTHGD 423



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 10/223 (4%)

Query: 57  FSILRHAIST-SDLLLGKSTHARILNSSQI--PDRFLTNNLMTMYSRCGSLVYARRLFDK 113
           FSI   A S   DL  G+  H  +    +    D  +   L+ MYS+CG L  AR++FD 
Sbjct: 137 FSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDS 196

Query: 114 MP-DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL-TLAPLLKLCLS 171
           +  D D + WN+++AAYA  G G      +   L+RS+ ++     +  T   ++ +C  
Sbjct: 197 IRHDADSVCWNAMIAAYAQHGRGK-----QALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 251

Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVM 231
              +     +H          +  VS ALV++Y K G + EA  +F  M+ +D + W  +
Sbjct: 252 LSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTI 311

Query: 232 LRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
           + +YA +G  ++   L+ ++   G+ P + +   +L   S  G
Sbjct: 312 ISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGG 354



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 133/269 (49%), Gaps = 14/269 (5%)

Query: 72  GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
           G+  H     S  +P+  +   +++MY +CG L  AR  F+++  ++ ++WN+++  Y  
Sbjct: 50  GREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKL 109

Query: 132 SGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
            G        E   LFR +  R       + + +  ++ C +   +     +H    + G
Sbjct: 110 DGRDR-----EALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREG 164

Query: 190 --LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVFH 246
             L  D  V  AL+N+YSK G + EA+ +FD ++ + D V W  M+ AYA++G G++   
Sbjct: 165 KELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALD 224

Query: 247 LFVDLH-RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
           L+  +H  + L P   +   V+ V ++L     +Q +A   ++   N ++N+++ N  + 
Sbjct: 225 LYRSMHDTTDLAPKQGTFVTVIDVCAELSAL--KQGRAIHARVRATNFDANLLVSNALVH 282

Query: 306 GYLQVGDNHGAIECFVNM-IRSNVQYDSV 333
            Y + G    A++ F +M ++  + ++++
Sbjct: 283 MYGKCGCLDEALDVFHSMKLKDEISWNTI 311



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 9/176 (5%)

Query: 67  SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
           S L  G++ HAR+  ++   +  ++N L+ MY +CG L  A  +F  M  +D ISWN+I+
Sbjct: 253 SALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTII 312

Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
           ++YA+ G  +     +   L++ +       + +T   LL  C   G V A    + Y +
Sbjct: 313 SSYAYHGHSD-----QALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLV-ADGLDYFYRM 366

Query: 187 KIGLVWDEFVS--GALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
           +        V   G ++++  + G++ EA+ +   M  + + V W  +L A   +G
Sbjct: 367 QDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 422


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.135    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,059,770,498
Number of Sequences: 23463169
Number of extensions: 584200102
Number of successful extensions: 1597833
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8888
Number of HSP's successfully gapped in prelim test: 2896
Number of HSP's that attempted gapping in prelim test: 1339281
Number of HSP's gapped (non-prelim): 90569
length of query: 919
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 767
effective length of database: 8,792,793,679
effective search space: 6744072751793
effective search space used: 6744072751793
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)