BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002460
(919 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/960 (56%), Positives = 663/960 (69%), Gaps = 109/960 (11%)
Query: 55 QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM 114
QWF LR+AI++SDL+LGK THARIL + P+RFL NNL++MYS+CGSL YARR+FDKM
Sbjct: 41 QWFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
PDRDL+SWNSILAAYA S E EN+ + F LFR LR+ + +TSR+TL+P+LKLCL SGY
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
VWASE+ HGYA KIGL DEFV+GALVNIY KFGK++E K LF+ M RDVVLW +ML+A
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQC---VLGVISDLGKRHEEQVQAYAIKLLLY 291
Y E GF EE L H SGL P++ +++ + G SD G QV+++A
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG-----QVKSFA------ 269
Query: 292 NNN-----SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
N N S ++ NK LS YL G ++CF +M+ S+V+ D VTF++ LA D
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329
Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------------------- 381
+L LGQQ+H LK G + V NSLINMY K+
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 382 ------------CV------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV 423
C+ CGL+ DQ+T+ SVL+A+SSLPEGL LSKQ+HVHAIK + V
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
+DSFVSTALID Y RN M EAE LFE + FDL WNAM+ GY S++ HK L+LF+ M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
H GER D+ T+AT K CG L + QGKQ+HAYA+KSG++LDL VSSGILDMYVKCG M
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
AQ F+ IP PDDVAWTTMISGC++NGEE+ A ++ QMRL GV+PDEFT A L KAS
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
SCLTALEQGRQIHAN +KL+C++DPFVG SLVDMYAKCG+I+DAY LFK+++M N WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
AMLVGLAQHG G+ETL+LF+ MK+ G++PD VTFIGVLSACS++GLVSEAY++ M
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
YGI+PE+EHYS L DALGRAG K+A LI SM EASASM+R LL ACRVQGDTETGK
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------- 832
VA KL+ LEP DSSAYVLLSN++AAA++WD++ AR MK VKKDP
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Query: 833 ------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
+LI+ KV+ +I+ IK+ GYVP+TDF L+DVEEEEKERALYYHSEKLA
Sbjct: 869 IFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAV 928
Query: 881 AYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
A+GL+STPPS+ I + N+E + ANRFH +DG+C C D
Sbjct: 929 AFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGD 988
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 300/966 (31%), Positives = 456/966 (47%), Gaps = 127/966 (13%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
G+ H++IL + L+ L Y G L A ++FD+MP+R + +WN ++ A
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA- 162
Query: 132 SGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVW-ASETVHGYALKIG 189
+ + E F LF R + E++T + T + +L+ C + E +H L G
Sbjct: 163 ----SRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
L V L+++YS+ G + A+ +FDG++ +D W M+ ++N E LF
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 250 DLHRSGLCPDDESVQCVL----------------GVISDLGKRHEEQVQAYAIKLLLYNN 293
D++ G+ P + VL G++ LG + V + L +
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 294 N-------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
N + V +N ++G Q G A+E F M ++ DS T +
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK--------------------- 379
A + L GQQ+H T K GF S + +L+N+Y+K
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 380 ---MGCVCGLRTD-------------------QFTLASVLRASSSLPEGLHLSKQIHVHA 417
M GL D Q+T S+L+ L + L L +QIH
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD-LELGEQIHSQI 516
Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
IK + +++V + LID+Y + G + A + G D+ +W MI GY N KAL
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
F M G R DE+ + AV AC L LK+G+Q+HA A SGF DL + ++ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
+CG + ++ F A D++AW ++SG +G + AL ++ +M G+ + FTF
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
VKA+S ++QG+Q+HA + K S+ V +L+ MYAKCG+I DA F ++ +
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
N V WNA++ ++HG G E L F+ M V P+ VT +GVLSACS+ GLV + F
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
M +YG+ P+ EHY +VD L RAG A E I MP + A + R LL AC V +
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------ 831
E G++ A L+ LEP DS+ YVLLSN++A + +WD R +MK K VKK+P
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 832 -----------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
AD I + L KR E GYV D +L +++ E+K+ ++ H
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 996
Query: 875 SEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDG 911
SEKLA ++GL+S P + I +SN+E + A RFHH G
Sbjct: 997 SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1056
Query: 912 MCPCAD 917
C C D
Sbjct: 1057 ACSCKD 1062
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 179/671 (26%), Positives = 302/671 (45%), Gaps = 78/671 (11%)
Query: 161 TLAPLLKLCL-SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDG 219
TL LL+ CL ++G + +H LK+GL + +S L + Y G + A +FD
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 220 MQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVL------GVISDL 273
M ER + W M++ A EVF LFV + + P++ + VL V D+
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 274 GKRHEEQVQAYAIK---------LLLYNNNSNVVL---------------WNKKLSGYLQ 309
++ ++ ++ + LY+ N V L W +SG +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
AI F +M + F L+A ++L +G+Q+HG LK GF S V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 370 GNSLINMYSKMGCVC-------------------------------------------GL 386
N+L+++Y +G + GL
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
D TLAS++ A S+ L +Q+H + K +++ + AL+++Y + + A
Sbjct: 386 EPDSNTLASLVVACSA-DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
F + ++ WN M+ Y L ++ + +F M ++ T + +K C L
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
L+ G+Q+H+ +K+ F+L+ V S ++DMY K G + A I D V+WTTMI+
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
G +D AL+ + QM G+ DE V A + L AL++G+QIHA SS
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624
Query: 627 D-PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
D PF +LV +Y++CG IE++Y+ F+Q + + + WNA++ G Q GN EE L++F M
Sbjct: 625 DLPFQN-ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
G++ ++ TF + A S T + + + H + K G + E E + L+ + G
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 746 TKEAGELILSM 756
+A + L +
Sbjct: 743 ISDAEKQFLEV 753
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 247/590 (41%), Gaps = 88/590 (14%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L L +G+ H +L D ++ N L+++Y G+L+ A +F M R
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
D +++N+++ + G G + LF+ + TLA L+ C + G ++
Sbjct: 353 DAVTYNTLINGLSQCGYGE-----KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +H Y K+G + + GAL+N+Y+K I A F + +VVLW VML AY
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
F +F + + P+ + +L LG EQ+ + IK
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 288 -------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
+L+ +VV W ++GY Q + A+ F M+ +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
+ D V A++A AG L GQQIH SGF S + N+L+ +YS+ G +
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
G+ + FT S ++A+S
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA- 706
Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
+ KQ+H K +++ V ALI +Y + GS+++AE F + +WNA+I
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG----KQMHA-YAMK 520
Y +AL+ F M S R + +T+ + AC + ++ +G + M++ Y +
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCV 569
E +CV +DM + G + A+ ++P PD + W T++S CV
Sbjct: 827 PKPEHYVCV----VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 214/464 (46%), Gaps = 43/464 (9%)
Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
+T ++ L L+ + SL EG +++H +K ++ +S L D Y G + A
Sbjct: 85 QTLKWLLEGCLKTNGSLDEG----RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC-GCL 505
+F+ + TWN MI N + LF M + +E T + ++AC G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
+ +Q+HA + G V + ++D+Y + G + A+ +F+ + D +W MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
SG N E A+ ++ M + G++P + F+ ++ A + +LE G Q+H ++KL S
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
SD +V +LV +Y GN+ A +F M R+ V +N ++ GL+Q G GE+ ++LF+ M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG-------------------- 725
G+EPDS T ++ ACS G + + H K G
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 726 --------IEPEVEH---YSFLVDALGRAGRTKEAGELILSMPFE---ASASMHRALLGA 771
+E EVE+ ++ ++ A G + + + M E + + ++L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYV--LLSNIFAAANQWD 813
C GD E G+ + +++ F +AYV +L +++A + D
Sbjct: 500 CIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLD 542
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 588 GVVPDEFTFAILVKASSCLT---ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
G+ P+ T L++ CL +L++GR++H+ ++KL S+ + L D Y G++
Sbjct: 79 GIRPNHQTLKWLLEG--CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
A+ +F +M R WN M+ LA E LF M + V P+ TF GVL AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
+ + E H G+ + L+D R G
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 236
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S ++ A T+++ GK HA I + + + N L++MY++CGS+ A + F ++ +
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSG---- 173
+ +SWN+I+ AY+ G G +E F + S + +TL +L C G
Sbjct: 757 NEVSWNAIINAYSKHGFG-----SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDK 811
Query: 174 ---YVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWK 229
Y + + +G + K + +V +V++ ++ G + AK M + D ++W+
Sbjct: 812 GIAYFESMNSEYGLSPKP----EHYV--CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 865
Query: 230 VMLRA---YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKR 276
+L A + GE H ++L P+D + +L + + K+
Sbjct: 866 TLLSACVVHKNMEIGEFAAHHLLELE-----PEDSATYVLLSNLYAVSKK 910
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 290/977 (29%), Positives = 468/977 (47%), Gaps = 142/977 (14%)
Query: 76 HARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEG 135
H+R+ + D +L NNL+ Y G V AR++FD+MP R+ +SW I++ Y+ +GE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 136 NAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA--SETVHGYALKIGLVWD 193
E R + + F+++ +L+ C G V +HG K+ D
Sbjct: 84 K-----EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 194 EFVSGALVNIYSK-FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
VS L+++Y K G + A F ++ ++ V W ++ Y++ G F +F +
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 253 RSGLCPDD---------------------ESVQCVL---GVISDL-------GKRHEEQV 281
G P + E + C + G+++DL +
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
+YA K+ N V N + G ++ A + F++M S + ++++ L++
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSS 317
Query: 342 -----VAGTDNLNLGQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLR------TD 389
+A L G+++HG + +G ++ +GN L+NMY+K G + R TD
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 390 Q-------------------------------------FTLASVLRASSSLPEGLHLSKQ 412
+ FTL S L + +SL L +Q
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA-KLGQQ 436
Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
IH ++K + VS AL+ +Y G + E +F + D +WN++I S
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 473 S-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
S +A+ F + +G++L+ IT ++ + A L + GKQ+H A+K+ + +
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN 556
Query: 532 GILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
++ Y KCG M + IF+ + D+V W +MISG + N AL + M +G
Sbjct: 557 ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQR 616
Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
D F +A ++ A + + LE+G ++HA ++ SD VG +LVDMY+KCG ++ A
Sbjct: 617 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 651 FKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGL 709
F M +RN+ WN+M+ G A+HG GEE LKLFE MK G PD VTF+GVLSACS+ GL
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
+ E +++F M + YG+ P +EH+S + D LGRAG + + I MP + + + R +L
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Query: 770 GA-CRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNV 827
GA CR G E GK AE L LEP ++ YVLL N++AA +W+D+ AR +MK +V
Sbjct: 797 GACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADV 856
Query: 828 KKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEE 864
KK+ AD+I+ K++ L +++++ GYVP T F L D+E+
Sbjct: 857 KKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQ 916
Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY----------------------- 901
E KE L YHSEKLA A+ L + S++ + + L
Sbjct: 917 ENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILR 976
Query: 902 -ANRFHHLRDGMCPCAD 917
+NRFHH +DG C C+D
Sbjct: 977 DSNRFHHFQDGACSCSD 993
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 176/714 (24%), Positives = 297/714 (41%), Gaps = 89/714 (12%)
Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
G+ A+ H K L D ++ L+N Y + G A+ +FD M R+ V W ++
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV---ISDLGKRHEEQVQ------A 283
Y+ NG +E D+ + G+ + + VL I +G Q+ +
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 284 YAIKLLLYN-----------------------NNSNVVLWNKKLSGYLQVGDNHGAIECF 320
YA+ ++ N N V WN +S Y Q GD A F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 321 VNMIRSNVQYDSVTF--LVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS 378
+M + TF LV A ++ L +QI T KSG + + VG+ L++ ++
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 379 KMGCVCGLRT----------------------------------DQFTLASVLRAS---- 400
K G + R D ++ V S
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
Query: 401 -SSLPE-------GLHLSKQIHVHAIKNDTVADSFV--STALIDVYCRNGSMAEAEYLFE 450
SS PE GL +++H H I V D V L+++Y + GS+A+A +F
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLV-DFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 451 NKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQ 510
D +WN+MI G + +A+E + M T+ +++ +C L K
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVD 570
G+Q+H ++K G +L++ VS+ ++ +Y + G + + + IF+ +P D V+W ++I G +
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALA 492
Query: 571 NGEEDL--ALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP 628
E L A+ + + +G + TF+ ++ A S L+ E G+QIH +K + + +
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 629 FVGISLVDMYAKCGNIEDAYILFKQM-DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
+L+ Y KCG ++ +F +M + R+ V WN+M+ G + + L L M
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
G DS + VLSA + + E H + +E +V S LVD + GR
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 748 EAGELILSMPFEASASMHRALLGACR-VQGDTETGKWVAEKLMALEPFDSSAYV 800
A +MP S S + + G R QG+ + KL P D +V
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFV 725
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 247/592 (41%), Gaps = 96/592 (16%)
Query: 63 AISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISW 122
+++ D+ L + I S + D F+ + L++ +++ GSL YAR++F++M R+ ++
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 123 NSILAAYAHSGEGNAENVTEGFRLFRSLRESI-----TFTSRLTLAPLLKLCLSSGYVWA 177
N ++ G E +LF + I ++ L+ P L G
Sbjct: 278 NGLMVGLVRQKWGE-----EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332
Query: 178 SETVHGYALKIGLVWDEFVSG---ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
E VHG+ + GLV +F+ G LVN+Y+K G I +A+ +F M ++D V W M+
Sbjct: 333 RE-VHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIKLLLYNN 293
+NG E + + R + P ++ L + L + +Q+ ++KL + N
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 294 --NSNVVLWNKKLSGYL--------------QVGDNH-------------GAIECFVNMI 324
SN ++ +GYL QV N A+ CF+N
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV- 383
R+ + + +TF L+AV+ LG+QIHG LK+ N+LI Y K G +
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569
Query: 384 -------------------------------------------CGLRTDQFTLASVLRAS 400
G R D F A+VL A
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629
Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
+S+ L ++H +++ +D V +AL+D+Y + G + A F + +W
Sbjct: 630 ASVAT-LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHAYAM 519
N+MI GY +AL+LF M G+ D +T + AC +L++G + H +M
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESM 747
Query: 520 KSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
+ L + S + D+ + G + + +P P+ + W T++ C
Sbjct: 748 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
++L S + L G HA + + D + + L+ MYS+CG L YA R F+ MP R
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLR-ESITFTSRLTLAPLLKLC-----LS 171
+ SWNS+++ YA G+G E +LF +++ + T +T +L C L
Sbjct: 684 NSYSWNSMISGYARHGQGE-----EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER-DVVLWKV 230
G+ Y L + + F + ++ + G++ + + + M + +V++W+
Sbjct: 739 EGFKHFESMSDSYGLAPRI--EHF--SCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 231 MLRAYAE-NG----FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQA 283
+L A NG G++ + L P++ +LG + G R E+ V+A
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLE-----PENAVNYVLLGNMYAAGGRWEDLVKA 847
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
SC+ R H+ L K D ++ +L++ Y + G+ A +F +M +RN V W
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLV 710
++ G +++G +E L DM G+ + F+ VL AC G V
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/838 (31%), Positives = 412/838 (49%), Gaps = 82/838 (9%)
Query: 68 DLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
+L K A +L +P D FLT +L++ YS GS+ A +LFD +P D++S N ++
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
+ Y E R F + + ++ ++ C + SE V + +
Sbjct: 123 SGYKQH-----RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTI 177
Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
K+G + E V AL++++SK + +A +F +V W ++ N VF
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD 237
Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK------------LLLYNN 293
LF ++ PD + VL + L K R + VQA IK + LY
Sbjct: 238 LFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
Query: 294 ---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVA 338
N +VV W LSGY + D A+E F M S V+ ++ T
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC-------------- 384
++A + Q+H KSGFY V +LI+MYSK G +
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQR 417
Query: 385 ------------------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIH 414
GLRTD+F++ S+L S+ + L+L KQ+H
Sbjct: 418 QNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCLNLGKQVH 473
Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
+ +K+ V D V ++L +Y + GS+ E+ LF+ D A W +MI G+
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
+A+ LFS M G DE T+A + C L +GK++H Y +++G + + + S ++
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593
Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
+MY KCG++ A+ +++ +P D V+ +++ISG +G ++ M +SG D F
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
+ ++KA++ G Q+HA + K+ ++P VG SL+ MY+K G+I+D F Q+
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
+ + + W A++ AQHG E L+++ MK G +PD VTF+GVLSACS+ GLV E+Y
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRV 774
+ + M + YGIEPE HY +VDALGR+GR +EA I +M + A + LL AC++
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 775 QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
G+ E GK A+K + LEP D+ AY+ LSNI A +WD+V R MK V+K+P
Sbjct: 834 HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/603 (23%), Positives = 265/603 (43%), Gaps = 91/603 (15%)
Query: 53 SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
S + S+L S L GK AR++ D F+ ++ +Y++CG + A +F
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
++P+ ++SW +L+ Y S + + +F+ +R S + T+ ++ C
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFS-----ALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLF---DGMQERDVVLWK 229
V + VH + K G D V+ AL+++YSK G I ++ +F D +Q +++V
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--N 422
Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS--DLGKRHEEQVQAYAIK 287
VM+ +++++ + LF + + GL D+ SV +L V+ +LGK QV Y +K
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGK----QVHGYTLK 478
Query: 288 -------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIEC 319
LY+ ++ W +SG+ + G AI
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
F M+ D T L + +L G++IHG TL++G + +G++L+NMYSK
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 380 MG-------------------------------------------CVCGLRTDQFTLASV 396
G + G D F ++S+
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFD 456
L+A ++L + L Q+H + K + V ++L+ +Y + GS+ + F +G D
Sbjct: 659 LKA-AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 457 LATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK-QMH 515
L W A+I Y +++AL++++ M G + D++T + AC ++++ ++
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEE 574
+ G E + ++D + G + +A+S N++ PD + W T+++ C +GE
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837
Query: 575 DLA 577
+L
Sbjct: 838 ELG 840
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 5/230 (2%)
Query: 49 SSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYAR 108
+S S ++L S L GK H L + L + L+ MYS+CGSL AR
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 109 RLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKL 168
+++D++P+ D +S +S+++ Y+ G + +GF LFR + S ++ +LK
Sbjct: 607 QVYDRLPELDPVSCSSLISGYSQHGL-----IQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 169 CLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLW 228
S VH Y KIGL + V +L+ +YSKFG I + F + D++ W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
++ +YA++G E ++ + G PD + VL S G E
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEE 771
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 269/870 (30%), Positives = 421/870 (48%), Gaps = 137/870 (15%)
Query: 175 VWASETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKF-----LFDGMQERDVVLW 228
+W ++ + K + + +G A V IY FG + ++ LFD RD +
Sbjct: 7 IWRPPSLENFKPKFRI----YANGVAQVRIYC-FGTVSSSRLYNAHNLFDKSPGRDRESY 61
Query: 229 KVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIK 287
+L ++ +G +E LF+++HR G+ D VL V + L + Q+ IK
Sbjct: 62 ISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK 121
Query: 288 LLLYNNNS----------------------------NVVLWNKKLSGYLQVGDNHGAIEC 319
++ S NVV W +SGY + N +
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
F+ M Q +S TF AL +A G Q+H +K+G + V NSLIN+Y K
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 380 MGCV---------------------------CGL----------------RTDQFTLASV 396
G V GL R + + ASV
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 397 LRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF- 455
++ ++L E L ++Q+H +K + D + TAL+ Y + +M +A LF+
Sbjct: 302 IKLCANLKE-LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
++ +W AMI G++ ++ +A++LFS M G R +E T + + A L + ++H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVH 416
Query: 516 AYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEED 575
A +K+ +E V + +LD YVK G + +A +F+ I D VAW+ M++G GE +
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 576 LALSIYHQMRLSGVVPDEFTFAILVKASSCLTA-LEQGRQIHANLIKLDCSSDPFVGISL 634
A+ ++ ++ G+ P+EFTF+ ++ + A + QG+Q H IK S V +L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 635 VDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
+ MYAK GNIE A +FK+ ++ V WN+M+ G AQHG + L +F++MK V+ D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL 754
VTFIGV +AC++ GLV E + F +M I P EH S +VD RAG+ ++A ++I
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 755 SMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDD 814
+MP A +++ R +L ACRV TE G+ AEK++A++P DS+AYVLLSN++A + W +
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 815 VTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGY 851
R M +NVKK+P D I+ K+E L R+K+ GY
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGY 776
Query: 852 VPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVIL----------------- 894
PDT +VL D+++E KE L HSE+LA A+GLI+TP S +L
Sbjct: 777 EPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKL 836
Query: 895 ----SNKEPLY--ANRFHHL-RDGMCPCAD 917
+E + +NRFHH DG+C C D
Sbjct: 837 IAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/591 (23%), Positives = 259/591 (43%), Gaps = 94/591 (15%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L+ + + D L G+ H + + + D + +L+ Y + + R++FD+M +R
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
++++W ++++ YA N+ N E LF ++ T + T A L + G
Sbjct: 158 NVVTWTTLISGYAR----NSMN-DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
VH +K GL VS +L+N+Y K G +R+A+ LFD + + VV W M+ YA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-LLYNNN- 294
NG E +F + + + + S V+ + ++L + R EQ+ +K L++ N
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 295 ---------------------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
NVV W +SG+LQ A++ F M R
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---- 383
V+ + T+ V L A+ ++H +K+ + + VG +L++ Y K+G V
Sbjct: 393 VRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 384 ---------------------------------------CGLRTDQFTLASVLRASSSLP 404
G++ ++FT +S+L ++
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
+ KQ H AIK+ + VS+AL+ +Y + G++ AE +F+ + DL +WN+MI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
GY + KAL++F M ++D +T AC ++++G++ ++
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR---- 624
Query: 525 LDLCVS------SGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTTMISGC 568
D ++ S ++D+Y + G + A + ++P P W T+++ C
Sbjct: 625 -DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 162/362 (44%), Gaps = 41/362 (11%)
Query: 52 SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
S S + S+++ + +L + H ++ + D+ + LM YS+C +++ A RLF
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 112 DKMP-DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCL 170
++ +++SW ++++ + + +G E V LF ++ + T + + L
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQN-DGKEEAVD----LFSEMKRKGVRPNEFTYS----VIL 404
Query: 171 SSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKV 230
++ V + VH +K V AL++ Y K GK+ EA +F G+ ++D+V W
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 231 MLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI--SDLGKRHEEQVQAYAIK- 287
ML YA+ G E +F +L + G+ P++ + +L V ++ +Q +AIK
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 288 ------------LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECF 320
L +Y N+ V WN +SGY Q G A++ F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 321 VNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNS-LINMYSK 379
M + V+ D VTF+ AA + G++ ++ + NS ++++YS+
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 380 MG 381
G
Sbjct: 645 AG 646
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/786 (31%), Positives = 379/786 (48%), Gaps = 117/786 (14%)
Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
+ +HG ++ + F+ +V+ Y+ A+ +FD + + ++ W +L AY++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVV 298
G E+ F L PD + V
Sbjct: 86 GLISEMESTFEKL------PDRDGVT---------------------------------- 105
Query: 299 LWNKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
WN + GY G A++ + M+R + VT + L + +++LG+QIHG
Sbjct: 106 -WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
+K GF S ++VG+ L+ MY+ +GC+ + + L
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD---------------------- 202
Query: 418 IKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKAL 477
+N + +S + L C G + +A LF + D +W AMI G + + +A+
Sbjct: 203 -RNTVMYNSLMGGLLA---C--GMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAI 255
Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
E F M G ++D+ + + ACG L + +GKQ+HA +++ F+ + V S ++DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
KC + A+++F+ + + V+WT M+ G G + A+ I+ M+ SG+ PD +T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
+ A + +++LE+G Q H I V SLV +Y KCG+I+D+ LF +M++R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
+ V W AM+ AQ G ET++LF+ M HG++PD VT GV+SACS GLV + F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
LM +YGI P + HYS ++D R+GR +EA I MPF A LL ACR +G+
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----- 832
E GKW AE L+ L+P + Y LLS+I+A+ +WD V R M+ KNVKK+P
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Query: 833 ------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYH 874
D I+AK+E L +I + GY PDT FV DVEE K + L YH
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYH 675
Query: 875 SEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRFHHLRDG 911
SE+LA A+GLI P I ++ +E L A RFH +DG
Sbjct: 676 SERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDG 735
Query: 912 MCPCAD 917
C C D
Sbjct: 736 TCSCGD 741
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 144/594 (24%), Positives = 236/594 (39%), Gaps = 149/594 (25%)
Query: 73 KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
K H I+ + P+ FL NN++ Y+ S YARR+FD++P +L SWN++L AY+ +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 133 G---------------EGNAENV-TEGFRLF-----------RSLRESITFTSRLTLAPL 165
G +G NV EG+ L +R+ +R+TL +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
LKL S+G+V + +HG +K+G V L+ +Y+ G I +AK +F G+ +R+
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 226 VL------------------------------WKVMLRAYAENGFGEEVFHLFVDLHRSG 255
V+ W M++ A+NG +E F ++ G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 256 LCPDDESVQCVLGVISDLGKRHE-EQVQA----------------------------YAI 286
L D VL LG +E +Q+ A YA
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 287 KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTD 346
+ NVV W + GY Q G A++ F++M RS + D T A++A A
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 347 NLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEG 406
+L G Q HG + SG V V NSL+ +Y K CG D L + +
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK----CGDIDDSTRLFNEM--------- 432
Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
V D+ TA++ Y + G E
Sbjct: 433 ---------------NVRDAVSWTAMVSAYAQFGRAVE---------------------- 455
Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
++LF M G + D +T+ + AC ++++G Q + M S + +
Sbjct: 456 ---------TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGIV 505
Query: 527 LCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
+ S ++D++ + G + +A N +P PD + WTT++S C + G ++
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 5/203 (2%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
GK HA I+ ++ ++ + L+ MY +C L YA+ +FD+M ++++SW +++ Y
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
+G E ++F ++ S TL + C + + HG A+ GL+
Sbjct: 349 TGRAE-----EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403
Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
VS +LV +Y K G I ++ LF+ M RD V W M+ AYA+ G E LF +
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Query: 252 HRSGLCPDDESVQCVLGVISDLG 274
+ GL PD ++ V+ S G
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAG 486
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 161/390 (41%), Gaps = 55/390 (14%)
Query: 47 FSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY 106
FS++ + ++L+ + S + LGK H +++ + + L+ MY+ G +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 107 ARRLFDKMPDRDLISWNSILAAYAHSG-----------------------EGNAEN--VT 141
A+++F + DR+ + +NS++ G +G A+N
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 142 EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
E FR ++ + +L C G + + +H ++ +V AL+
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
++Y K + AK +FD M++++VV W M+ Y + G EE +F+D+ RSG+ PD
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 262 SVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYN--------------- 292
++ + +++ E Q AI + LY
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
N + V W +S Y Q G I+ F M++ ++ D VT ++A + + GQ
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 353 QIHG-TTLKSGFYSAVIVGNSLINMYSKMG 381
+ T + G ++ + +I+++S+ G
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 65 STSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNS 124
+ S L G H + + S I ++N+L+T+Y +CG + + RLF++M RD +SW +
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 125 ILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGY 184
+++AYA G E +LF + + +TL ++ C +G V +
Sbjct: 443 MVSAYAQFGRA-----VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 185 AL-KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENG 239
+ G+V +++++S+ G++ EA +GM D + W +L A G
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 596 FAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
+++ +K L A Q R IH N+I+ + F+ ++V YA + A +F
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
++ N WN +L+ ++ G E FE + + D VT+ ++ S +GLV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGA 121
Query: 713 AYENFHLMREKY 724
A + ++ M +
Sbjct: 122 AVKAYNTMMRDF 133
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 267/857 (31%), Positives = 418/857 (48%), Gaps = 120/857 (14%)
Query: 181 VHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE-RDVVLWKVMLRAYAENG 239
+H + +GL +F SG L++ YS F + + +F + ++V LW ++RA+++NG
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 240 FGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNNN 294
E + L S + PD + V+ + ++G EQ+ + L+ N
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 295 S------------------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQY 330
+ ++V WN +SGY G A+E + + S +
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 331 DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM---------- 380
DS T L A + GQ +HG LKSG S V+V N L+ MY K
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 381 ------------GCVCG--------------------LRTDQFTLASVLRASSSLPEGLH 408
+CG + D T++SVLRA L + L
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRD-LS 324
Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYI 468
L+K I+ + +K V +S V LIDVY + G M A +F + + D +WN++I GYI
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 469 LSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
S + +A++LF M E+ D IT + L LK GK +H+ +KSG +DL
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
VS+ ++DMY KCG + D+ IF+ + D V W T+IS CV G+ L + QMR S
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
VVPD TF + + + L A G++IH L++ S+ +G +L++MY+KCG +E++
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
+F++M R+ V W M+ +G GE+ L+ F DM+ G+ PDSV FI ++ ACS++G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 709 LVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRAL 768
LV E F M+ Y I+P +EHY+ +VD L R+ + +A E I +MP + AS+ ++
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 769 LGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVK 828
L ACR GD ET + V+ +++ L P D +L SN +AA +WD V+ R +K K++
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744
Query: 829 KDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV-EE 864
K+P ++ I+ +E L + + GY+PD V ++ EE
Sbjct: 745 KNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEE 804
Query: 865 EEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY-- 901
EEK R + HSE+LA A+GL++T P + + + +E L
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864
Query: 902 ANRFHHLRDGMCPCADN 918
ANRFH +DG C C D
Sbjct: 865 ANRFHLFKDGTCSCKDR 881
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 170/740 (22%), Positives = 313/740 (42%), Gaps = 89/740 (12%)
Query: 59 ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKM-PDR 117
I R S+S+L + HA +++ F + L+ YS + +F ++ P +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
++ WNSI+ A++ +G E + LRES + T ++K C
Sbjct: 70 NVYLWNSIIRAFSKNGL-----FPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ V+ L +G D FV ALV++YS+ G + A+ +FD M RD+V W ++ Y+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKL-------- 288
+G+ EE ++ +L S + PD +V VL +L + Q + +A+K
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 289 --------LLYNNNSNV------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
L + ++ V +N + GYL++ ++ F+ +
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQF 303
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR- 387
+ D +T L A +L+L + I+ LK+GF V N LI++Y+K G + R
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 388 ------------------------------------------TDQFTLASVLRASSSLPE 405
D T ++ S+ L +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
L K +H + IK+ D VS ALID+Y + G + ++ +F + D TWN +I
Sbjct: 424 -LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
+ + L++ + M S D T + C L + GK++H ++ G+E
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
+L + + +++MY KCG + ++ +F + D V WT MI GE + AL + M
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGN 643
SG+VPD F ++ A S +++G + K DP + +VD+ ++
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM-KTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 644 IEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLS 702
I A + M ++ + +W ++L G+ E ++ + + PD + +L+
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV--SRRIIELNPDDPGY-SILA 718
Query: 703 ACSYTGLVSEAYENFHLMRE 722
+ +Y L ++ L+R+
Sbjct: 719 SNAYAAL--RKWDKVSLIRK 736
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 159/632 (25%), Positives = 281/632 (44%), Gaps = 85/632 (13%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+++ D +G + +IL+ D F+ N L+ MYSR G L AR++FD+MP R
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
DL+SWNS+++ Y+ G E ++ L+ S T++ +L + V
Sbjct: 171 DLVSWNSLISGYSSHG-----YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQ 225
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +HG+ALK G+ V+ LV +Y KF + +A+ +FD M RD V + M+ Y +
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVL---GVISDL-------------GKRHEEQV 281
EE +F++ + PD +V VL G + DL G E V
Sbjct: 286 LEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 282 QAYAIKLL-----------LYNNN--SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
+ I + ++N+ + V WN +SGY+Q GD A++ F M+
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------- 381
Q D +T+L+ ++ +L G+ +H +KSG + V N+LI+MY+K G
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 382 -------------------CV-CGLRTDQFTLASVLRASSSLPE---------------G 406
CV G + + +R S +P+
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
L K+IH ++ ++ + ALI++Y + G + + +FE D+ TW MI+
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584
Query: 467 YILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD 526
Y + KALE F+ M SG D + + AC ++ +G MK+ +++D
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFE-KMKTHYKID 643
Query: 527 LCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ 583
+ + ++D+ + + A+ +P PD W +++ C +G+ + A +
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV--S 701
Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
R+ + PD+ ++IL AS+ AL + ++
Sbjct: 702 RRIIELNPDDPGYSIL--ASNAYAALRKWDKV 731
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 205/415 (49%), Gaps = 9/415 (2%)
Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN- 451
++ L +SS+L E ++IH I + F S LID Y A + +F
Sbjct: 10 ISRALSSSSNLNE----LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
++ WN++I + + +ALE + + S D+ T + +KAC L + G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
++ + GFE DL V + ++DMY + G + A+ +F+++P D V+W ++ISG +
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
G + AL IYH+++ S +VPD FT + ++ A L ++QG+ +H +K +S V
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVE 691
LV MY K DA +F +MD+R++V +N M+ G + EE++++F + +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFK 304
Query: 692 PDSVTFIGVLSACSYTGLVSEA-YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
PD +T VL AC + +S A Y ++++ + +E V + L+D + G A
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITAR 362
Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNI 805
++ SM + + S + + G + E K ++ E D Y++L ++
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 255/855 (29%), Positives = 407/855 (47%), Gaps = 129/855 (15%)
Query: 59 ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
+L +++ G+ H ++ + + L+ MY++C + ARR+F+ + D +
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
+ W + + Y +G E +F +R+
Sbjct: 226 TVCWTCLFSGYVKAGLPE-----EAVLVFERMRDE------------------------- 255
Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
G D ++N Y + GK+++A+ LF M DVV W VM+ + +
Sbjct: 256 ----------GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR 305
Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYNN 293
G F ++ +S + ++ VL I DLG V A AIKL L +N
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL----VVHAEAIKLGLASN 361
Query: 294 ----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
N V WN + GY G++H +E F++M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-- 383
S D TF L+ A + +L +G Q H +K + VGN+L++MY+K G +
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 384 -----------------------------------------CGLRTDQFTLASVLRASSS 402
CG+ +D LAS L+A +
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
+ GL+ KQ+H ++K D ++LID+Y + G + +A +F + + + + NA
Sbjct: 542 V-HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
+I GY NN +A+ LF M T G EIT AT V+AC L G Q H K G
Sbjct: 601 LIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 523 FELD---LCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLAL 578
F + L +S +L MY+ M +A ++F+++ +P + WT M+SG NG + AL
Sbjct: 660 FSSEGEYLGIS--LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMY 638
Y +MR GV+PD+ TF +++ S L++L +GR IH+ + L D +L+DMY
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 639 AKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTF 697
AKCG+++ + +F +M R N V WN+++ G A++G E+ LK+F+ M+ + PD +TF
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 698 IGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
+GVL+ACS+ G VS+ + F +M +YGIE V+H + +VD LGR G +EA + I +
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897
Query: 758 FEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTS 817
+ A + +LLGACR+ GD G+ AEKL+ LEP +SSAYVLLSNI+A+ W+ +
Sbjct: 898 LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 957
Query: 818 ARGEMKRKNVKKDPA 832
R M+ + VKK P
Sbjct: 958 LRKVMRDRGVKKVPG 972
Score = 312 bits (800), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 339/682 (49%), Gaps = 59/682 (8%)
Query: 69 LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
L +GK+ H++ L + L N ++ +Y++C + YA + FD + ++D+ +WNS+L+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
Y+ G+ + R F SL E+ F ++ T + +L C V +H +K+
Sbjct: 135 YSSIGKPG-----KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
GL + + GALV++Y+K +I +A+ +F+ + + + V W + Y + G EE +F
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYL 308
+ G PD + V+ LGK + ++ L ++ +VV WN +SG+
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL------LFGEMSSPDVVAWNVMISGHG 303
Query: 309 QVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVI 368
+ G AIE F NM +S+V+ T L+A+ NL+LG +H +K G S +
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 369 VGNSLINMYSKMGCV-------------------------------------------CG 385
VG+SL++MYSK + G
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
D FT S+L ++ + L + Q H IK + FV AL+D+Y + G++ +A
Sbjct: 424 YNIDDFTFTSLL-STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
+FE D TWN +I Y+ N +A +LF M+ G D +A+ +KAC +
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
L QGKQ+H ++K G + DL S ++DMY KCG + DA+ +F+ +P V+ +I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
+G N E+ A+ ++ +M GV P E TFA +V+A +L G Q H + K S
Sbjct: 603 AGYSQNNLEE-AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Query: 626 SD-PFVGISLVDMYAKCGNIEDAYILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFE 683
S+ ++GISL+ MY + +A LF ++ ++ VLW M+ G +Q+G EE LK ++
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 684 DMKAHGVEPDSVTFIGVLSACS 705
+M+ GV PD TF+ VL CS
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCS 743
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/611 (23%), Positives = 253/611 (41%), Gaps = 84/611 (13%)
Query: 41 FLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSR 100
F S S+ S S+L ++L LG HA + + ++ ++L++MYS+
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 101 CGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRL 160
C + A ++F+ + +++ + WN+++ YAH+GE + V E LF ++ S
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE--SHKVME---LFMDMKSSGYNIDDF 429
Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
T LL C +S + H +K L + FV ALV++Y+K G + +A+ +F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEE 279
+RD V W ++ +Y ++ E F LF ++ G+ D + L + + G +
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 280 QVQAYAIKLLLYNN----------------------------NSNVVLWNKKLSGYLQVG 311
QV ++K L + +VV N ++GY Q
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-N 608
Query: 312 DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS-AVIVG 370
+ A+ F M+ V +TF + A ++L LG Q HG K GF S +G
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 371 NSLINMYSK---MGCVC-----------------------------------------GL 386
SL+ MY M C G+
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
DQ T +VLR S L L + IH D S LID+Y + G M +
Sbjct: 729 LPDQATFVTVLRVCSVLSS-LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 447 YLF-ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
+F E + ++ +WN++I GY + + AL++F M S DEIT + AC
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 506 LMLKQGKQMHAYAM-KSGFELDLCVSSGILDMYVKCGAMVDAQSIFN-DIPAPDDVAWTT 563
+ G+++ + + G E + + ++D+ + G + +A PD W++
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 564 MISGCVDNGEE 574
++ C +G++
Sbjct: 908 LLGACRIHGDD 918
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
L L+ GK +H+ ++ G + + + + I+D+Y KC + A+ F D D AW +M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSML 132
Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
S G+ L + + + + P++FTF+I++ + T +E GRQIH ++IK+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
+ + G +LVDMYAKC I DA +F+ + NTV W + G + G EE + +FE M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 686 KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGR 745
+ G PD + F+ V++ G + +A F M P+V ++ ++ G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGC 307
Query: 746 TKEAGELILSMPFEASASMHRALLGA 771
A E +M ++S R+ LG+
Sbjct: 308 ETVAIEYFFNMR-KSSVKSTRSTLGS 332
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/771 (32%), Positives = 385/771 (49%), Gaps = 79/771 (10%)
Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
+ +++ + K G + A+ LFD M +R VV W +++ YA N +E F LF + RS
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 257 C--PDDESVQCVLGVISD-LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDN 313
C PD + +L +D + + QV A+A+KL ++ N + + N L Y +V
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRRL 200
Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
A F + + DSVTF + L G + K G Y+ I
Sbjct: 201 DLACVLFEEI----PEKDSVTF----------NTLITGYE------KDGLYTESI----- 235
Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
+++ KM G + FT + VL+A L + L +Q+H ++ D+ V ++
Sbjct: 236 -HLFLKMR-QSGHQPSDFTFSGVLKAVVGLHD-FALGQQLHALSVTTGFSRDASVGNQIL 292
Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
D Y ++ + E LF+ D ++N +I Y ++ +L F M G
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
AT + L L+ G+Q+H A+ + + L V + ++DMY KC +A+ IF +
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 554 PAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
P V+WT +ISG V G L ++ +MR S + D+ TFA ++KAS+ +L G+
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
Q+HA +I+ + F G LVDMYAKCG+I+DA +F++M RN V WNA++ A +G
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
+GE + F M G++PDSV+ +GVL+ACS+ G V + E F M YGI P+ +HY
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEP 793
+ ++D LGR GR EA +L+ MPFE M ++L ACR+ + + AEKL ++E
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 794 F-DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-------------------- 832
D++AYV +SNI+AAA +W+ V + M+ + +KK PA
Sbjct: 653 LRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTH 712
Query: 833 ---DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPP 889
D I K+ L I+ GY PDT V+ DV+E+ K +L YHSE+LA A+ LISTP
Sbjct: 713 PNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPE 772
Query: 890 SS--VILSNKEPLY---------------------ANRFHHLRDGMCPCAD 917
V++ N +RFHH +G+C C D
Sbjct: 773 GCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGD 823
Score = 172 bits (437), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 252/568 (44%), Gaps = 90/568 (15%)
Query: 91 TNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSL 150
TN +++ + + G + AR LFD MPDR +++W ++ YA + + E F+LFR +
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNS-----HFDEAFKLFRQM 136
Query: 151 --RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEF--VSGALVNIYSK 206
S T +T LL C + A VH +A+K+G + F VS L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
++ A LF+ + E+D V + ++ Y ++G E HLF+ + +SG P D + V
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 267 LGVISDLGKRHE----EQVQAYAIK-------------LLLYNNNSNV------------ 297
L + L H+ +Q+ A ++ L Y+ + V
Sbjct: 257 LKAVVGL---HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 298 ---VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
V +N +S Y Q ++ F M + F L+ A +L +G+Q+
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 355 HGTTLKSGFYSAVIVGNSLINMYSK----------------------MGCVCG------- 385
H L + S + VGNSL++MY+K + G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 386 --------------LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTA 431
LR DQ T A+VL+AS+S L L KQ+H I++ + + F +
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFA-SLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 432 LIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
L+D+Y + GS+ +A +FE + +WNA+I + + + A+ F+ M SG + D
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 492 EITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
++I + AC ++QG + A + G + +LD+ + G +A+ +
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Query: 551 NDIP-APDDVAWTTMISGCVDNGEEDLA 577
+++P PD++ W+++++ C + + LA
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLA 640
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
++L A + S L +G+ H + L ++ + N+L+ MY++C A +F +P R
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
+SW ++++ Y G A G +LF +R S + T A +LK S +
Sbjct: 416 TTVSWTALISGYVQKGLHGA-----GLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +H + ++ G + + F LV++Y+K G I++A +F+ M +R+ V W ++ A+A+
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
NG GE F + SGL PD S+ VL S G
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 153/376 (40%), Gaps = 51/376 (13%)
Query: 34 FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
++ S+ FL+ S + +L+ + D LG+ HA + + D + N
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ 290
Query: 94 LMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRES 153
++ YS+ ++ R LFD+MP+ D +S+N ++++Y+ + + A FR + +
Sbjct: 291 ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA-----SLHFFREM-QC 344
Query: 154 ITFTSR-LTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
+ F R A +L + + + +H AL V +LV++Y+K E
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD 272
A+ +F + +R V W ++ Y + G LF + S L D + VL +
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 273 -----LGKRHEEQVQAY----------------------------AIKLLLYNNNSNVVL 299
LGK Q+ A+ A+++ + N V
Sbjct: 465 FASLLLGK----QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA-------GTDNLNLGQ 352
WN +S + GD AI F MI S +Q DSV+ L L A + GT+
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 353 QIHGTTLKSGFYSAVI 368
I+G T K Y+ ++
Sbjct: 581 PIYGITPKKKHYACML 596
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 512 KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDN 571
+++ A +K+GF+ D C S+ I++ ++ G + A+ +++++P + V+ TMISG V
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 572 GEE-------------------------------DLALSIYHQMRLSG--VVPDEFTFAI 598
G+ D A ++ QM S +PD TF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 599 LVKASSCLTALEQGR--QIHANLIKLDCSSDPFVGIS--LVDMYAKCGNIEDAYILFKQM 654
L+ C A+ Q Q+HA +KL ++PF+ +S L+ Y + ++ A +LF+++
Sbjct: 153 LLPG--CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
+++V +N ++ G + G E++ LF M+ G +P TF GVL A GL A
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFAL 268
Query: 715 -ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMP 757
+ H + G + + ++D + R E L MP
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 257/834 (30%), Positives = 407/834 (48%), Gaps = 140/834 (16%)
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EE 279
Q R W +LR+ + E +VD+ G+ PD+ + +L ++DL +
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 280 QVQAYAIK--------------LLLYN---------------NNSNVVLWNKKLSGYLQV 310
Q+ A+ K + LY + N V WN +S
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG---TDNLNLGQQIHGTTLKSGFYSAV 367
A+E F M+ NV+ S T + + A + + L +G+Q+H L+ G ++
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237
Query: 368 IVGNSLINMYSKMG-------------------------CVC------------------ 384
I+ N+L+ MY K+G +C
Sbjct: 238 II-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV-ADSFVSTALIDVYCRNGSMA 443
G+ D+FT++SVL A S L E L K++H +A+KN ++ +SFV +AL+D+YC +
Sbjct: 297 GVEPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 444 EAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKAC 502
+F+ + WNAMI GY + + +AL LF M S L + T+A V AC
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
+ + +H + +K G + D V + ++DMY + G + A IF + D V W
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 563 TMISGCVDNGEEDLALSIYHQM------------RLSGVVPDEFTFAILVKASSCLTALE 610
TMI+G V + + AL + H+M R+S + P+ T ++ + + L+AL
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALA 534
Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
+G++IHA IK + ++D VG +LVDMYAKCG ++ + +F Q+ +N + WN +++
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
HGNG+E + L M GV+P+ VTFI V +ACS++G+V E F++M+ YG+EP
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFE-ASASMHRALLGACRVQGDTETGKWVAEKLM 789
+HY+ +VD LGRAGR KEA +L+ MP + A +LLGA R+ + E G+ A+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 790 ALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP------------------ 831
LEP +S YVLL+NI+++A WD T R MK + V+K+P
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 832 -----ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLIS 886
++ + +E L +R+++ GYVPDT VL +VEE+EKE L HSEKLA A+G+++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 887 TPPSSVILSNKEPLYAN-----------------------RFHHLRDGMCPCAD 917
T P ++I K N RFH ++G C C D
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGD 888
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 154/351 (43%), Gaps = 58/351 (16%)
Query: 69 LLLGKSTHARIL-NSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
L GK HA L N S + F+ + L+ MY C ++ RR+FD M DR + WN+++A
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
Y+ + E+ E LF + ES + T+A ++ C+ SG E +HG+ +
Sbjct: 378 GYSQN-----EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
K GL D FV L+++YS+ GKI A +F M++RD+V W M+ Y + E+
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 247 LFVDLH-----------RSGLCPDDESVQCVL---GVISDLGKRHEEQVQAYAIKLLLYN 292
L + R L P+ ++ +L +S L K E + AYAIK L
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE--IHAYAIKNNLAT 550
Query: 293 N----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI 324
+ NV+ WN + Y G+ AI+ M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQI-------HGTTLKSGFYSAVI 368
V+ + VTF+ AA + + ++ G +I +G S Y+ V+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 187/442 (42%), Gaps = 85/442 (19%)
Query: 12 RHKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWF----------SILR 61
RHKH Y++ ++ T T ++ S ++S P S F S S S +W+ ++LR
Sbjct: 26 RHKHPYLLRATPTSAT-EDVAS-AVSGAP----SIFISQSRSPEWWIDLLRSKVRSNLLR 79
Query: 62 HAIST--------------------------SDLLLGKSTHARILNSSQIPDRF-LTNNL 94
A+ T D+ LGK HA + D + N L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 95 MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
+ +Y +CG ++FD++ +R+ +SWNS++++ + E FR + +
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC-----SFEKWEMALEAFRCMLDEN 194
Query: 155 TFTSRLTLAPLLKLC----LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
S TL ++ C + G + + VH Y L+ G + + F+ LV +Y K GK+
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQ-VHAYGLRKGEL-NSFIINTLVAMYGKLGKL 252
Query: 211 REAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVI 270
+K L RD+V W +L + +N E ++ G+ PD+ ++ VL
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 271 SDLGK-RHEEQVQAYAIK--------------LLLYNNNSNVV---------------LW 300
S L R +++ AYA+K + +Y N V+ LW
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
N ++GY Q + A+ F+ M S + +S T + A + + + IHG +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 360 KSGFYSAVIVGNSLINMYSKMG 381
K G V N+L++MYS++G
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLG 454
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 45 SHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSL 104
S S +S +IL + S L GK HA + ++ D + + L+ MY++CG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 105 VYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
+R++FD++P +++I+WN I+ AY G G E L R + + +T
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ-----EAIDLLRMMMVQGVKPNEVTFIS 623
Query: 165 LLKLCLSSGYVWASETVHGYALK--IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
+ C SG V + Y +K G+ +V++ + G+I+EA L + M
Sbjct: 624 VFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMP 681
Query: 223 RD 224
RD
Sbjct: 682 RD 683
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/709 (31%), Positives = 363/709 (51%), Gaps = 91/709 (12%)
Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
VL++ L G+ +V D A++ FV M +V+ F L L +G++IHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 358 TLKSGFYSAVIVGNSLINMYSKMG------------------------------------ 381
+KSGF + L NMY+K
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 382 -------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
C L+ T+ SVL A S+L + + K+IH +A+++ + +STAL+D
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSAL-RLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
+Y + GS+ A LF+ ++ +WN+MI Y+ + N +A+ +F M G + +++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
+ A+ AC L L++G+ +H +++ G + ++ V + ++ MY KC + A S+F +
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
+ V+W MI G NG AL+ + QMR V PD FT+ ++ A + L+ +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
IH +++ + FV +LVDMYAKCG I A ++F M R+ WNAM+ G HG
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
G+ L+LFE+M+ ++P+ VTF+ V+SACS++GLV + F++M+E Y IE ++HY
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579
Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
+VD LGRAGR EA + I+ MP + + +++ A+LGAC++ + + AE+L L P
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639
Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP----------------------- 831
D +VLL+NI+ AA+ W+ V R M R+ ++K P
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699
Query: 832 ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSS 891
+ I+A +E LI IKE GYVPDT+ V L VE + KE+ L HSEKLA ++GL++T +
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAGT 758
Query: 892 VI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
I ++ +E + + RFHH ++G C C D
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGD 807
Score = 172 bits (437), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 4/315 (1%)
Query: 394 ASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKD 453
A +L SSL E +QI KN + F T L+ ++CR GS+ EA +FE D
Sbjct: 41 ALLLERCSSLKE----LRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 454 GFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ 513
++ M+ G+ ++ KAL+ F M +K CG L+ GK+
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 514 MHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGE 573
+H +KSGF LDL +G+ +MY KC + +A+ +F+ +P D V+W T+++G NG
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 574 EDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGIS 633
+AL + M + P T ++ A S L + G++IH ++ S + +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 634 LVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
LVDMYAKCG++E A LF M RN V WN+M+ Q+ N +E + +F+ M GV+P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 694 SVTFIGVLSACSYTG 708
V+ +G L AC+ G
Sbjct: 337 DVSVMGALHACADLG 351
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 144/606 (23%), Positives = 256/606 (42%), Gaps = 106/606 (17%)
Query: 67 SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
++L +GK H ++ S D F L MY++C + AR++FD+MP+RDL+SWN+I+
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
A Y+ +G + +S+ E S +T+ +L + + + +HGYA+
Sbjct: 209 AGYSQNGMARM-----ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
+ G +S ALV++Y+K G + A+ LFDGM ER+VV W M+ AY +N +E
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ-VQAYAIKLLLYNNNSNV-------- 297
+F + G+ P D SV L +DLG + + +++L L N S V
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 298 --------------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
V WN + G+ Q G A+ F M V+ D+ T++
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVL 397
+ A+A + + IHG ++S V V +L++MY+K G
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA--------------- 488
Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGF 455
I + + D +++ V+T A+ID Y +G
Sbjct: 489 ---------------IMIARLIFDMMSERHVTTWNAMIDGYGTHG--------------- 518
Query: 456 DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMH 515
FG ALELF M + + +T + + AC +++ G +
Sbjct: 519 ---------FG-------KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 516 AYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDNG 572
Y MK + ++L + ++D+ + G + +A +P V + M+ C +
Sbjct: 563 -YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 621
Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILV-KASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
+ A RL + PD+ + +L+ + E+ Q+ ++++ P G
Sbjct: 622 NVNFAEKAAE--RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP--G 677
Query: 632 ISLVDM 637
S+V++
Sbjct: 678 CSMVEI 683
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/565 (23%), Positives = 245/565 (43%), Gaps = 79/565 (13%)
Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
K GL + F LV+++ ++G + EA +F+ + + VL+ ML+ +A+ ++
Sbjct: 61 FKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKAL 120
Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISD-----LGKR-HEEQVQA-YAIKLLLYNNNSN-- 296
FV + + P + +L V D +GK H V++ +++ L N
Sbjct: 121 QFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMY 180
Query: 297 --------------------VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFL 336
+V WN ++GY Q G A+E +M N++ +T +
Sbjct: 181 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 337 VALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV------------- 383
L AV+ +++G++IHG ++SGF S V + +L++MY+K G +
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 384 ------------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
G++ ++ L A + L + L + I
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD-LERGRFI 359
Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
H +++ + V +LI +YC+ + A +F L +WNAMI G+ +
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
AL FS M + + D T + + A L + K +H M+S + ++ V++ +
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
+DMY KCGA++ A+ IF+ + W MI G +G AL ++ +M+ + P+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 594 FTFAILVKASSCLTALEQGRQIHANLIK---LDCSSDPFVGISLVDMYAKCGNIEDAYIL 650
TF ++ A S +E G + + + ++ S D + ++VD+ + G + +A+
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG--AMVDLLGRAGRLNEAWDF 597
Query: 651 FKQMDMRNTV-LWNAMLVGLAQHGN 674
QM ++ V ++ AML H N
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKN 622
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 145/311 (46%), Gaps = 35/311 (11%)
Query: 63 AISTSDLL-LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLIS 121
A+S L+ +GK H + S ++ L+ MY++CGSL AR+LFD M +R+++S
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
WNS++ AY + EN E +F+ + + + +++ L C G + +
Sbjct: 305 WNSMIDAYVQN-----ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
H ++++GL + V +L+++Y K ++ A +F +Q R +V W M+ +A+NG
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ--------------------- 280
+ + F + + PD + V+ I++L H +
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 281 VQAYA------IKLLLYN--NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDS 332
V YA I L+++ + +V WN + GY G A+E F M + ++ +
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 333 VTFLVALAAVA 343
VTFL ++A +
Sbjct: 540 VTFLSVISACS 550
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/758 (30%), Positives = 380/758 (50%), Gaps = 80/758 (10%)
Query: 153 SITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIRE 212
+I R A LL+L S + VHG + GL D ++S L+N+YS+ G +
Sbjct: 38 TIGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97
Query: 213 AKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL-CPDDESVQCVLGVIS 271
A+ +F+ M ER++V W M+ A +G EE +F++ R+ P++ + + S
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 272 DL---GKRHEEQVQAYAIK-----------LLL--YNNNSNV---------------VLW 300
L G+ Q+Q++ +K LL+ Y + N+ V W
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
+SG +++G ++ +++ F ++ NV D L+A + L G+QIH L+
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 361 SGFYSAVIVGNSLINMYSKMGCVC------------------------------------ 384
G + N LI+ Y K G V
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337
Query: 385 -------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYC 437
GL+ D + +S+L + +SL L Q+H + IK + DS+V+ +LID+Y
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASL-HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 438 RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS---HKALELFSHMHTSGERLDEIT 494
+ + +A +F+ D+ +NAMI GY H+AL +F M R +T
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
+ ++A L L KQ+H K G LD+ S ++D+Y C + D++ +F+++
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
D V W +M +G V E + AL+++ +++LS PDEFTFA +V A+ L +++ G++
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
H L+K +P++ +L+DMYAKCG+ EDA+ F R+ V WN+++ A HG
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
G++ L++ E M + G+EP+ +TF+GVLSACS+ GLV + + F LM ++GIEPE EHY
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYV 695
Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
+V LGRAGR +A ELI MP + +A + R+LL C G+ E + AE + +P
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 755
Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
DS ++ +LSNI+A+ W + R MK + V K+P
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG 793
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 258/847 (30%), Positives = 387/847 (45%), Gaps = 158/847 (18%)
Query: 160 LTLAPLLKLCLS--------SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
L+L+ LL+LC + S + ++ VH +K GL++ ++ L+N+YSK G
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
A+ LFD M R W +L AY++ G + F L P +SV
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL------PQRDSVS------- 113
Query: 272 DLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYD 331
W + GY +G H AI +M++ ++
Sbjct: 114 ----------------------------WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 332 SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
T LA+VA T + G+++H +K G V V NSL+NMY+K CG
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK----CG------ 195
Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
+ V D A+I ++ + G M A FE
Sbjct: 196 ------------------DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ 237
Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHM-HTSGERLDEITIATAVKACGCLLMLKQ 510
D+ TWN+MI G+ +AL++FS M S D T+A+ + AC L L
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 511 GKQMHAYAMKSGFELDLCVSSGILDMYVKCGA---------------------------- 542
GKQ+H++ + +GF++ V + ++ MY +CG
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 543 -----MVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
M A++IF + D VAWT MI G +G A++++ M G P+ +T A
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDM- 656
++ +S L +L G+QIH + +K V +L+ MYAK GNI A F +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 657 RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYEN 716
R+TV W +M++ LAQHG+ EE L+LFE M G+ PD +T++GV SAC++ GLV++ +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 717 FHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQG 776
F +M++ I P + HY+ +VD GRAG +EA E I MP E +LL ACRV
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 777 DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---- 832
+ + GK AE+L+ LEP +S AY L+N+++A +W++ R MK VKK+
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 833 -------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYY 873
+ I+ ++ + IK+ GYVPDT VL D+EEE KE+ L +
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 874 HSEKLARAYGLISTPPSSVILSNKEPLYAN-----------------------RFHHLRD 910
HSEKLA A+GLISTP + + K N RFHH +D
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 911 GMCPCAD 917
G C C D
Sbjct: 778 GFCSCRD 784
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 39/236 (16%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDK---- 113
S+L + L +GK H+ I+ + + N L++MYSRCG + ARRL ++
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 114 -----------------------------MPDRDLISWNSILAAYAHSGEGNAENVTEGF 144
+ DRD+++W +++ Y G + E
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG-----SYGEAI 398
Query: 145 RLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY 204
LFRS+ + TLA +L + S + + +HG A+K G ++ VS AL+ +Y
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
+K G I A FD ++ ERD V W M+ A A++G EE LF + GL PD
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 151/386 (39%), Gaps = 90/386 (23%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
++L +T + GK H+ I+ + ++N+L+ MY++CG + A+ +FD+M R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 118 DLISWNSILAAYAHSGE-----GNAENVTE-----------GFR-----------LFRSL 150
D+ SWN+++A + G+ E + E GF + L
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS----- 205
R+S+ R TLA +L C + + + +H + + G V AL+++YS
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 206 ----------------------------KFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
K G + +AK +F +++RDVV W M+ Y +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCV-LGVISDLGKRHEEQVQAYAIK--------- 287
+G E +LF + G P+ ++ + S H +Q+ A+K
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 288 ----LLLYNNNSNV----------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
+ +Y N+ V W + Q G A+E F M+
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 328 VQYDSVTFLVALAAVAGTDNLNLGQQ 353
++ D +T++ +A +N G+Q
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ 536
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 363 bits (933), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 233/712 (32%), Positives = 363/712 (50%), Gaps = 90/712 (12%)
Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECF-VNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
N +V WN +SGY + G++ I CF + M+ S + D TF L A + G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 169
Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSK------------------MG---------CVC 384
+IH LK GF V V SLI++YS+ MG C
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSK-----------QIHVHAIKNDTVADSFVSTALI 433
G + TL++ LRA S+ LS IH ++IK+ ++ FVS LI
Sbjct: 230 GNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
D+Y G + + + +F+ DL +WN++I Y L+ +A+ LF M S + D +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFEL-DLCVSSGILDMYVKCGAMVDAQSIFND 552
T+ + L ++ + + + ++ G+ L D+ + + ++ MY K G + A+++FN
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALEQ 611
+P D ++W T+ISG NG A+ +Y+ M G + ++ T+ ++ A S AL Q
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
G ++H L+K D FV SL DMY KCG +EDA LF Q+ N+V WN ++
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
HG+GE+ + LF++M GV+PD +TF+ +LSACS++GLV E F +M+ YGI P ++
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
HY +VD GRAG+ + A + I SM + AS+ ALL ACRV G+ + GK +E L +
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA------------------- 832
EP +VLLSN++A+A +W+ V R K ++K P
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709
Query: 833 ----DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
+ ++ ++ L ++K GYVPD FVL DVE++EKE L HSE+LA A+ LI+TP
Sbjct: 710 HPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATP 769
Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
+ I ++ +E + +NRFHH ++G+C C D
Sbjct: 770 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGD 821
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/587 (24%), Positives = 244/587 (41%), Gaps = 88/587 (14%)
Query: 67 SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
++L K HAR++ S QI + ++ L+ +Y G++ AR FD + +RD+ +WN ++
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 127 AAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL 186
+ Y + GN+ V F LF L +T R T +LK C + V +H AL
Sbjct: 125 SGYGRA--GNSSEVIRCFSLFM-LSSGLTPDYR-TFPSVLKACRT---VIDGNKIHCLAL 177
Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
K G +WD +V+ +L+++YS++ + A+ LFD M RD+ W M+ Y ++G +E
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237
Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEE-QVQAYAIK-----LLLYNNN------ 294
L L D +V +L ++ G + + +Y+IK L +N
Sbjct: 238 LSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 295 -----------------SNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLV 337
+++ WN + Y AI F M S +Q D +T +
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSG-FYSAVIVGNSLINMYSKMGCVCGLR--------- 387
+ ++ ++ + + G TL+ G F + +GN+++ MY+K+G V R
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 388 -----------------------------------TDQFTLASVLRASSSLPEGLHLSKQ 412
+Q T SVL A S L +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ-AGALRQGMK 472
Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
+H +KN D FV T+L D+Y + G + +A LF + WN +I + +
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQ-MHAYAMKSGFELDLCVSS 531
KA+ LF M G + D IT T + AC ++ +G+ G L
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 532 GILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
++DMY + G + A + PD W ++S C +G DL
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 159/303 (52%), Gaps = 8/303 (2%)
Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
L +K +H + + + + +S L+++YC G++A A + F++ D+ WN MI G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 467 YILSNNSHKALELFS-HMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
Y + NS + + FS M +SG D T + +KAC ++ G ++H A+K GF
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMW 183
Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMR 585
D+ V++ ++ +Y + A+ +A+ +F+++P D +W MISG +G AL++ + +R
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
D T L+ A + +G IH+ IK S+ FV L+D+YA+ G +
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
D +F +M +R+ + WN+++ + + LF++M+ ++PD +T I + S S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 706 YTG 708
G
Sbjct: 360 QLG 362
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 36/326 (11%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L D G + H+ + + F++N L+ +Y+ G L +++FD+M R
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
DLISWNSI+ AY + E LF+ +R S LTL L + G + A
Sbjct: 312 DLISWNSIIKAYELN-----EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 178 SETVHGYALKIGLVWDEFVSG-ALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
+V G+ L+ G ++ G A+V +Y+K G + A+ +F+ + DV+ W ++ YA
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 237 ENGFGEEVFHLFVDLHRSG-LCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKLLLYNN- 293
+NGF E ++ + G + + + VL S G R ++ +K LY +
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 294 ---------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS 326
N V WN ++ + G A+ F M+
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 327 NVQYDSVTFLVALAAVAGTDNLNLGQ 352
V+ D +TF+ L+A + + ++ GQ
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQ 572
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 50 SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
+++ W S+L L G H R+L + D F+ +L MY +CG L A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
LF ++P + + WN+++A + G G + LF+ + + +T LL C
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGE-----KAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 170 LSSGYV----WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREA-KFLFDGMQERD 224
SG V W E + G+ G +V++Y + G++ A KF+ + D
Sbjct: 563 SHSGLVDEGQWCFEMMQ---TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 225 VVLWKVMLRAYAENG 239
+W +L A +G
Sbjct: 620 ASIWGALLSACRVHG 634
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 5/168 (2%)
Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
T L+ + +HA L+ + + LV++Y GN+ A F + R+ WN M+
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 667 VGLAQHGNGEETLKLFE-DMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
G + GN E ++ F M + G+ PD TF VL AC V + H + K+G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDG-NKIHCLALKFG 180
Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
+V + L+ R A L MP S + + G C+
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 239/722 (33%), Positives = 374/722 (51%), Gaps = 103/722 (14%)
Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
+VV W+ ++ Y G AI+ FV + + + + + A + +D + +G+
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 356 GTTLKSG-FYSAVIVGNSLINMYSK--------------------------------MG- 381
G +K+G F S V VG SLI+M+ K MG
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 382 -----------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
+ G +D+FTL+SV A + L E L L KQ+H AI++ V D V
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAEL-ENLSLGKQLHSWAIRSGLVDD--VEC 306
Query: 431 ALIDVYCR---NGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN-SHKALELFSHMHTS 486
+L+D+Y + +GS+ + +F+ + + +W A+I GY+ + N + +A+ LFS M T
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 487 GE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
G + T ++A KACG L + GKQ+ A K G + V++ ++ M+VK M D
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
AQ F + + V++ T + G N + A + ++ + FTFA L+ +
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
+ ++ +G QIH+ ++KL S + V +L+ MY+KCG+I+ A +F M+ RN + W +M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
+ G A+HG L+ F M GV+P+ VT++ +LSACS+ GLVSE + +F+ M E +
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
I+P++EHY+ +VD L RAG +A E I +MPF+A + R LGACRV +TE GK A
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666
Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD--------------- 830
K++ L+P + +AY+ LSNI+A A +W++ T R +MK +N+ K+
Sbjct: 667 RKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKF 726
Query: 831 --------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDV----EEEEKERALYYHSEKL 878
A I+ +++ LI IK GYVPDTD VL + +E EKER LY HSEK+
Sbjct: 727 YVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKI 786
Query: 879 ARAYGLISTPPSSVI---------------------LSNKEPLYA--NRFHHLRDGMCPC 915
A A+GLIST S + +S +E + NRFHH +DG C C
Sbjct: 787 AVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSC 846
Query: 916 AD 917
D
Sbjct: 847 ND 848
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/658 (23%), Positives = 287/658 (43%), Gaps = 90/658 (13%)
Query: 151 RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKI 210
R+ I +T + LLK C+ + + VH ++ + D + +L+++YSK G
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 211 REAKFLFDGMQ---ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDD------- 260
+A+ +F+ M+ +RDVV W M+ Y NG + +FV+ GL P+D
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 261 -------------------------ESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS 295
ES CV + D+ + E + A K+ +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN-AYKVFDKMSEL 232
Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
NVV W ++ +Q+G AI F++M+ S + D T +A A +NL+LG+Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 356 GTTLKSGF--------------------------------------YSAVIVG------- 370
++SG ++A+I G
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352
Query: 371 -NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
IN++S+M + + FT +S +A +L + + KQ+ A K ++S V+
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP-RVGKQVLGQAFKRGLASNSSVA 411
Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
++I ++ ++ M +A+ FE+ +L ++N + G + N +A +L S +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSI 549
+ T A+ + + +++G+Q+H+ +K G + V + ++ MY KCG++ A +
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 550 FNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTAL 609
FN + + ++WT+MI+G +G L ++QM GV P+E T+ ++ A S + +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 610 EQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-WNAML 666
+G + H N + D P + +VD+ + G + DA+ M + VL W L
Sbjct: 592 SEGWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Query: 667 VGLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
H N E L + ++ EP + + + AC+ G E+ E M+E+
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRRKMKER 706
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 164/739 (22%), Positives = 297/739 (40%), Gaps = 148/739 (20%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP-- 115
S+L+ I D LGK HAR++ PD L N+L+++YS+ G A +F+ M
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 116 -DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
RD++SW++++A Y ++G + ++F E + +++ C +S +
Sbjct: 127 GKRDVVSWSAMMACYGNNGRE-----LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 175 VWASETVHGYALKIG-LVWDEFVSGALVNIYSKFGKIREAKF-LFDGMQERDVVLWKVML 232
V G+ +K G D V +L++++ K E + +FD M E +VV W +M+
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241
Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLY 291
+ GF E F+D+ SG D ++ V ++L +Q+ ++AI+ L
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 292 NN-----------------------------NSNVVLWNKKLSGYLQVGD-NHGAIECFV 321
++ + +V+ W ++GY++ + AI F
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 322 NMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM 380
MI + +V+ + TF A A + +G+Q+ G K G S V NS+I+M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 381 --------------------------GCVCGLRTDQ-----------------FTLASVL 397
G L +Q FT AS+L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 398 RASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
+++ + +QIH +K + V ALI +Y + GS+ A +F + ++
Sbjct: 482 SGVANVG-SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG-----K 512
+W +MI G+ + + LE F+ M G + +E+T + AC + ++ +G
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDV-AWTTMISGCVDN 571
+ +K E C ++D+ + G + DA N +P DV W T + C +
Sbjct: 601 MYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Query: 572 GEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG 631
+L G+ +++LD ++P
Sbjct: 657 SNTEL-----------------------------------GKLAARKILELD-PNEPAAY 680
Query: 632 ISLVDMYAKCGNIEDAYILFKQMDMRNTVL-----W-------NAMLVGLAQHGNG---- 675
I L ++YA G E++ + ++M RN V W + VG H N
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740
Query: 676 EETLKLFEDMKAHGVEPDS 694
+E +L ++K G PD+
Sbjct: 741 DELDRLITEIKRCGYVPDT 759
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 19/402 (4%)
Query: 385 GLRT-DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMA 443
G+R D T +S+L+ S L K +H I+ D DS + +LI +Y ++G A
Sbjct: 56 GIRPMDSVTFSSLLK-SCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114
Query: 444 EAEYLFENKDGF---DLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
+AE +FE F D+ +W+AM+ Y + A+++F G ++ ++
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174
Query: 501 ACGCLLMLKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKC-GAMVDAQSIFNDIPAPDD 558
AC + G+ + MK+G FE D+CV ++DM+VK + +A +F+ + +
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHAN 618
V WT MI+ C+ G A+ + M LSG D+FT + + A + L L G+Q+H+
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 619 LIKLDCSSDPFVGISLVDMYAKC---GNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN- 674
I+ D V SLVDMYAKC G+++D +F +M+ + + W A++ G ++ N
Sbjct: 295 AIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352
Query: 675 GEETLKLFEDMKAHG-VEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE--KYGIEPEVE 731
E + LF +M G VEP+ TF AC G +S+ ++ + K G+
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
+ ++ ++ R ++A S+ + S + L G CR
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 6/249 (2%)
Query: 463 MIFGYILSNNSHKALELFSHMHTSGER-LDEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
+I ++ + + A+ M G R +D +T ++ +K+C + GK +HA ++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP---APDDVAWTTMISGCVDNGEEDLAL 578
E D + + ++ +Y K G A+ +F + D V+W+ M++ +NG E A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLD-CSSDPFVGISLVDM 637
++ + G+VP+++ + +++A S + GR L+K SD VG SL+DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 638 YAKCGN-IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVT 696
+ K N E+AY +F +M N V W M+ Q G E ++ F DM G E D T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 697 FIGVLSACS 705
V SAC+
Sbjct: 272 LSSVFSACA 280
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 42 LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRC 101
++ +HF+ SS+ + + SD +GK + + + N++++M+ +
Sbjct: 369 VEPNHFTFSSA-------FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 102 GSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLT 161
+ A+R F+ + +++L+S+N+ L G N + F+L + E S T
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFL-----DGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
A LL + G + E +H +K+GL ++ V AL+++YSK G I A +F+ M+
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
R+V+ W M+ +A++GF V F + G+ P++ + +L S +G
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 204/502 (40%), Gaps = 62/502 (12%)
Query: 307 YLQVGDNHGAIECFVNMIRSNVQ-YDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
+L GD GA+ M R ++ DSVTF L + + LG+ +H ++
Sbjct: 36 HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP 95
Query: 366 AVIVGNSLINMYSKMGCVCGLR-----TDQFTLASVLRASSSLP----EGLHLSK-QIHV 415
++ NSLI++YSK G +F V+ S+ + G L ++ V
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 416 HAIKNDTVADSFVSTALIDVYCRNG---SMAEAEYLFENKDGF---DLATWNAMIFGYIL 469
++ V + + TA+I C N + F K G D+ ++I ++
Sbjct: 156 EFLELGLVPNDYCYTAVIRA-CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 470 SNNS-HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-- 526
NS A ++F M L+ +T + C + ++ + + SGFE D
Sbjct: 215 GENSFENAYKVFDKM----SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 527 -----------------------LCVSSG--------ILDMYVKC---GAMVDAQSIFND 552
+ SG ++DMY KC G++ D + +F+
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 553 IPAPDDVAWTTMISGCVDNGE-EDLALSIYHQMRLSG-VVPDEFTFAILVKASSCLTALE 610
+ ++WT +I+G + N A++++ +M G V P+ FTF+ KA L+
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 611 QGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLA 670
G+Q+ K +S+ V S++ M+ K +EDA F+ + +N V +N L G
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 671 QHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
++ N E+ KL ++ + + TF +LS + G + + E H K G+
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQ 509
Query: 731 EHYSFLVDALGRAGRTKEAGEL 752
+ L+ + G A +
Sbjct: 510 PVCNALISMYSKCGSIDTASRV 531
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 577 ALSIYHQMRLSGVVP-DEFTFAILVKASSCLTA--LEQGRQIHANLIKLDCSSDPFVGIS 633
A+S M G+ P D TF+ L+K SC+ A G+ +HA LI+ D D + S
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLK--SCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 634 LVDMYAKCGN---IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV 690
L+ +Y+K G+ ED + ++ R+ V W+AM+ +G + +K+F + G+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 691 EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAG 750
P+ + V+ ACS + V + + E +V L+D + + E
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 751 ELILSMPFEASASMHRALLGACRVQG-DTETGKWVAEKLMALEPFDSSAYVLLSNIFAAA 809
+ E + ++ C G E ++ + M L F+S + LS++F+A
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD--MVLSGFESDKFT-LSSVFSAC 279
Query: 810 NQWDDVT 816
+ ++++
Sbjct: 280 AELENLS 286
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 362 bits (928), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 243/776 (31%), Positives = 365/776 (47%), Gaps = 148/776 (19%)
Query: 283 AYAIKLL--LYNNNSNVVLWNKKLSGYLQVGDNHGAIEC---FVNMIRSNVQYDSVTFLV 337
++A+ LL +++ V WN + Y GDN A +C F M + D+ TF
Sbjct: 76 SHAVSLLRRFPPSDAGVYHWNSLIRSY---GDNGCANKCLYLFGLMHSLSWTPDNYTFPF 132
Query: 338 ALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK------------------ 379
A ++ G+ H +L +GF S V VGN+L+ MYS+
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 380 --------------------------MGCVCGLRTDQFTLASVLRASSSLPEGLH-LSKQ 412
M G R D TL +VL +SL G H L KQ
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL--GTHSLGKQ 250
Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
+H A+ ++ + + FV L+D+Y + G M EA +F N D+ +WNAM+ GY
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 473 SHKALELFSHMH-----------------------------------TSGERLDEITIAT 497
A+ LF M +SG + +E+T+ +
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 498 AVKACGCLLMLKQGKQMHAYAMKSGFEL-------DLCVSSGILDMYVKCGAMVDAQSIF 550
+ C + L GK++H YA+K +L + V + ++DMY KC + A+++F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 551 NDIPAP--DDVAWTTMISGCVDNGEEDLALSIYHQM--RLSGVVPDEFTFAILVKASSCL 606
+ + D V WT MI G +G+ + AL + +M P+ FT + + A + L
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
Query: 607 TALEQGRQIHANLIKLDCSSDP-FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
AL G+QIHA ++ ++ P FV L+DMYAKCG+I DA ++F M +N V W ++
Sbjct: 491 AALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSL 550
Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYG 725
+ G HG GEE L +F++M+ G + D VT + VL ACS++G++ + E F+ M+ +G
Sbjct: 551 MTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFG 610
Query: 726 IEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVA 785
+ P EHY+ LVD LGRAGR A LI MP E + A L CR+ G E G++ A
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAA 670
Query: 786 EKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-------------- 831
EK+ L +Y LLSN++A A +W DVT R M+ K VKK P
Sbjct: 671 EKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTF 730
Query: 832 ---------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAY 882
A I+ + ++RIK+ GYVP+T F L DV++EEK+ L+ HSEKLA AY
Sbjct: 731 FVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAY 790
Query: 883 GLISTPPSSVILSNKEPLY-----------------------ANRFHHLRDGMCPC 915
G+++TP + I K ++RFHH ++G C C
Sbjct: 791 GILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 180/635 (28%), Positives = 300/635 (47%), Gaps = 79/635 (12%)
Query: 90 LTNNLMTMYSRCGSLVYARRLFDKMPDRD--LISWNSILAAYAHSGEGNAENVTEGFRLF 147
LT++L++ Y G L +A L + P D + WNS++ +Y +G N + LF
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN-----KCLYLF 115
Query: 148 RSLRESITFTS-RLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK 206
L S+++T T + K C V E+ H +L G + + FV ALV +YS+
Sbjct: 116 -GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 207 FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC-PDDESVQC 265
+ +A+ +FD M DVV W ++ +YA+ G + +F + C PD+ ++
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 266 VLGVISDLGKRH-EEQVQAYAIKLLLYNNN----------------------------SN 296
VL + LG +Q+ +A+ + N +
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
VV WN ++GY Q+G A+ F M ++ D VT+ AA++G LG
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW---SAAISGYAQRGLG----- 346
Query: 357 TTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
Y A+ V +++ G++ ++ TL SVL +S+ +H K+IH +
Sbjct: 347 -------YEALGVCRQMLS--------SGIKPNEVTLISVLSGCASVGALMH-GKEIHCY 390
Query: 417 AI-------KNDTVADSFVSTALIDVYCRNGSMAEAEYLFE--NKDGFDLATWNAMIFGY 467
AI KN ++ V LID+Y + + A +F+ + D+ TW MI GY
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 468 ILSNNSHKALELFSHM--HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE- 524
+++KALEL S M R + TI+ A+ AC L L+ GKQ+HAYA+++
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
+ L VS+ ++DMY KCG++ DA+ +F+++ A ++V WT++++G +G + AL I+ +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIK--LDCSSDPFVGISLVDMYAKCG 642
R G D T +++ A S ++QG + + N +K S P LVD+ + G
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGME-YFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 643 NIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
+ A L ++M M V+W A L HG E
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 252/573 (43%), Gaps = 109/573 (19%)
Query: 67 SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSIL 126
S + G+S HA L + I + F+ N L+ MYSRC SL AR++FD+M D++SWNSI+
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 127 AAYAHSGEGNAENVTEGFRLF-RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYA 185
+YA G+ +F R E +TL +L C S G + +H +A
Sbjct: 201 ESYAKLGKPKV-----ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 186 LKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVF 245
+ ++ + FV LV++Y+K G + EA +F M +DVV W M+ Y++ G E+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 246 HLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLS 305
LF E++Q IK+ +VV W+ +S
Sbjct: 316 RLF------------------------------EKMQEEKIKM-------DVVTWSAAIS 338
Query: 306 GYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL------ 359
GY Q G + A+ M+ S ++ + VT + L+ A L G++IH +
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398
Query: 360 -KSGFYSAVIVGNSLINMYSKMGCV----------------------------------- 383
K+G +V N LI+MY+K V
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 384 ------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS-FVST 430
C R + FT++ L A +SL L + KQIH +A++N A FVS
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASL-AALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
LID+Y + GS+++A +F+N + TW +++ GY + +AL +F M G +L
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 491 DEITIATAVKACGCLLMLKQG-----KQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
D +T+ + AC M+ QG + + + G E C ++D+ + G +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC----LVDLLGRAGRLNA 633
Query: 546 AQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
A + ++P P V W +S C +G+ +L
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 159/306 (51%), Gaps = 8/306 (2%)
Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLAT--WNAMIFGYILSNNSHKALELFSHMHT 485
+++ LI Y G ++ A L D WN++I Y + ++K L LF MH+
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
D T KACG + ++ G+ HA ++ +GF ++ V + ++ MY +C ++ D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASS 604
A+ +F+++ D V+W ++I G+ +AL ++ +M G PD T ++ +
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
L G+Q+H + + + FVG LVDMYAKCG +++A +F M +++ V WNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE-- 722
M+ G +Q G E+ ++LFE M+ ++ D VT+ +S + GL YE + R+
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL---GYEALGVCRQML 357
Query: 723 KYGIEP 728
GI+P
Sbjct: 358 SSGIKP 363
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 360 bits (923), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 298/551 (54%), Gaps = 47/551 (8%)
Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
+H H +++ D + L+++Y + GS+ EA +FE D TW +I GY +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
AL F+ M G +E T+++ +KA G Q+H + +K GF+ ++ V S
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
+LD+Y + G M DAQ +F+ + + +DV+W +I+G + AL ++ M G P
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFK 652
F++A L A S LEQG+ +HA +IK F G +L+DMYAK G+I DA +F
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 653 QMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE 712
++ R+ V WN++L AQHG G+E + FE+M+ G+ P+ ++F+ VL+ACS++GL+ E
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 713 AYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGAC 772
+ + LM+ K GI PE HY +VD LGRAG A I MP E +A++ +ALL AC
Sbjct: 382 GWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
Query: 773 RVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
R+ +TE G + AE + L+P D +V+L NI+A+ +W+D R +MK VKK+PA
Sbjct: 441 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 500
Query: 833 -----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKER 869
+ I K E ++ +IKE GYVPDT V++ V+++E+E
Sbjct: 501 CSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREV 560
Query: 870 ALYYHSEKLARAYGLISTPPSSVILSNKEPLY-----------------------ANRFH 906
L YHSEK+A A+ L++TPP S I K NRFH
Sbjct: 561 NLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFH 620
Query: 907 HLRDGMCPCAD 917
H +DG C C D
Sbjct: 621 HFKDGNCSCKD 631
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 182/370 (49%), Gaps = 45/370 (12%)
Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------------- 383
G+ +H L+S F +++GN+L+NMY+K G +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 384 ----C------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSF 427
C G ++FTL+SV++A+++ G Q+H +K ++
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC-CGHQLHGFCVKCGFDSNVH 197
Query: 428 VSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSG 487
V +AL+D+Y R G M +A+ +F+ + + +WNA+I G+ + + KALELF M G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
R + A+ AC L+QGK +HAY +KSG +L + +LDMY K G++ DA+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 548 SIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLT 607
IF+ + D V+W ++++ +G A+ + +MR G+ P+E +F ++ A S
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNT-VLWNAML 666
L++G + + K + + +++VD+ + G++ A ++M + T +W A+L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 667 VGLAQHGNGE 676
H N E
Sbjct: 438 NACRMHKNTE 447
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 125/217 (57%)
Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
T +K C +L QG+ +HA+ ++S F D+ + + +L+MY KCG++ +A+ +F +P
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIH 616
D V WTT+ISG + AL ++QM G P+EFT + ++KA++ G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
+K S+ VG +L+D+Y + G ++DA ++F ++ RN V WNA++ G A+ E
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
+ L+LF+ M G P ++ + ACS TG + +
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 34/342 (9%)
Query: 69 LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
L+ G+ HA IL S D + N L+ MY++CGSL AR++F+KMP RD ++W ++++
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
Y+ + + F + + TL+ ++K + +HG+ +K
Sbjct: 136 YSQH-----DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190
Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
G + V AL+++Y+++G + +A+ +FD ++ R+ V W ++ +A E+ LF
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 249 VDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAI----KLLLYNNNS-------- 295
+ R G P S + G S G + + V AY I KL+ + N+
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 296 ----------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
+VV WN L+ Y Q G A+ F M R ++ + ++FL L
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370
Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
A + + L+ G + K G +++++ + G
Sbjct: 371 TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 37 SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
+LL F Q F S + S+++ A + G H + + + + L+
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 97 MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
+Y+R G + A+ +FD + R+ +SWN+++A +A + LF+ +
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS-----GTEKALELFQGMLRDGFR 259
Query: 157 TSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFL 216
S + A L C S+G++ + VH Y +K G F L+++Y+K G I +A+ +
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 217 FDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
FD + +RDVV W +L AYA++GFG+E F ++ R G+ P++ S VL S G
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 161/436 (36%), Gaps = 93/436 (21%)
Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
LLK C + VH + L+ D + L+N+Y+K G + EA+ +F+ M +RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE---EQV 281
V W ++ Y+++ + F + R G P++ ++ V+ + +R Q+
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGCCGHQL 183
Query: 282 QAYAIK-------------LLLYNN---------------NSNVVLWNKKLSGYLQVGDN 313
+ +K L LY + N V WN ++G+ +
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 314 HGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSL 373
A+E F M+R + ++ A + T L G+ +H +KSG GN+L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 374 INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
++MY+K G + H +++I K D V
Sbjct: 304 LDMYAKSGSI------------------------HDARKIFDRLAKRDVV---------- 329
Query: 434 DVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEI 493
+WN+++ Y +A+ F M G R +EI
Sbjct: 330 -------------------------SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 494 TIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDI 553
+ + + AC +L +G + K G + ++D+ + G + A ++
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Query: 554 P-APDDVAWTTMISGC 568
P P W +++ C
Sbjct: 425 PIEPTAAIWKALLNAC 440
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 587 SGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIED 646
S + D + L+K + L QGR +HA++++ D +G +L++MYAKCG++E+
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 647 AYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA--- 703
A +F++M R+ V W ++ G +QH + L F M G P+ T V+ A
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 704 -------------CSYTGLVSEAYENFHLMR--EKYGIEPEVE------------HYSFL 736
C G S + L+ +YG+ + + ++ L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 737 VDALGRAGRTKEAGELILSM---PFEASASMHRALLGACRVQGDTETGKWV-------AE 786
+ R T++A EL M F S + +L GAC G E GKWV E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 787 KLMAL 791
KL+A
Sbjct: 294 KLVAF 298
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 360 bits (923), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 238/850 (28%), Positives = 401/850 (47%), Gaps = 125/850 (14%)
Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL- 251
D+ + ++ +Y+ G +++F+FD ++ +++ W ++ +Y+ N +EV F+++
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 252 HRSGLCPDDESVQCVLGV---ISDLG---KRHEEQVQAYAIKLLLYNN------------ 293
+ L PD + CV+ +SD+G H V+ ++ + N
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 294 -----------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN----VQYDSVTFLVA 338
N+V WN + + G + + M+ N D T +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT---------- 388
L A + LG+ +HG +K +++ N+L++MYSK GC+ +
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 389 --------------DQFTLASVLRAS---------------SSLPEGLHLS-----KQIH 414
D VLR +++P H S K++H
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 415 VHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH 474
+++K + V + V+ A + Y + GS++ A+ +F + +WNA+I G+ SN+
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
+L+ M SG D T+ + + AC L L+ GK++H + +++ E DL V +L
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538
Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
+Y+ CG + Q++F+ + V+W T+I+G + NG D AL ++ QM L G+
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598
Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
+ + A S L +L GR+ HA +K D F+ SL+DMYAK G+I + +F +
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAY 714
++T WNAM++G HG +E +KLFE+M+ G PD +TF+GVL+AC+++GL+ E
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718
Query: 715 ENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELIL-SMPFEASASMHRALLGACR 773
M+ +G++P ++HY+ ++D LGRAG+ +A ++ M EA + ++LL +CR
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA- 832
+ + E G+ VA KL LEP YVLLSN++A +W+DV R M +++KD
Sbjct: 779 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 838
Query: 833 ------DLIFAKVEG----------------LIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
+F+ V G L +I + GY PDT V D+ EEEK
Sbjct: 839 SWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ 898
Query: 871 LYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA------------NRFHH 907
L HSEKLA YGLI T + I N L + RFHH
Sbjct: 899 LRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHH 958
Query: 908 LRDGMCPCAD 917
++G+C C D
Sbjct: 959 FKNGVCSCGD 968
Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 201/737 (27%), Positives = 323/737 (43%), Gaps = 121/737 (16%)
Query: 52 SSSQWFSILRHAI--------STSDLLLGKSTHARILNSSQIP-DRFLTNNLMTMYSRCG 102
SSS F ++R A+ D+ +G+ H + S+++ D L ++TMY+ CG
Sbjct: 75 SSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCG 134
Query: 103 SLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTL 162
S +R +FD + ++L WN+++++Y+ + + V E F + + T
Sbjct: 135 SPDDSRFVFDALRSKNLFQWNAVISSYSRNEL--YDEVLETF--IEMISTTDLLPDHFTY 190
Query: 163 APLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQE 222
++K C V VHG +K GLV D FV ALV+ Y G + +A LFD M E
Sbjct: 191 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250
Query: 223 RDVVLWKVMLRAYAENGFGEEVFHLFVDLHR----SGLCPDDESVQCVLGVIS-----DL 273
R++V W M+R +++NGF EE F L ++ PD ++ VL V + L
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 274 GKRHEEQVQAYAIKLLL----------------------------YNNNSNVVLWNKKLS 305
GK V +A+KL L NNN NVV WN +
Sbjct: 311 GK----GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 366
Query: 306 GYLQVGDNHGAIECFVNMIR--SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGF 363
G+ GD HG + M+ +V+ D VT L A+ L +++H +LK F
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Query: 364 YSAVIVGNSLINMYSKMGC----------------------------------------- 382
+V N+ + Y+K G
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 383 --VCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNG 440
+ GL D FT+ S+L A S L + L L K++H I+N D FV +++ +Y G
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKL-KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 441 SMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVK 500
+ + LF+ + L +WN +I GY+ + +AL +F M G +L I++
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 501 ACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA 560
AC L L+ G++ HAYA+K E D ++ ++DMY K G++ + +FN + +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 561 WTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLI 620
W MI G +G A+ ++ +M+ +G PD+ TF LTA IH L
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL------GVLTACNHSGLIHEGLR 719
Query: 621 KLDCSSDPFVGIS--------LVDMYAKCGNIEDAY-ILFKQMDMRNTV-LWNAMLVGLA 670
LD F G+ ++DM + G ++ A ++ ++M V +W ++L
Sbjct: 720 YLDQMKSSF-GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 671 QHGN---GEET-LKLFE 683
H N GE+ KLFE
Sbjct: 779 IHQNLEMGEKVAAKLFE 795
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 8/289 (2%)
Query: 508 LKQGKQMHAYAMKSG-FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
++ G+++H S D + + I+ MY CG+ D++ +F+ + + + W +IS
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 567 GCVDNGEEDLALSIYHQM-RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
N D L + +M + ++PD FT+ ++KA + ++ + G +H ++K
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV 219
Query: 626 SDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDM 685
D FVG +LV Y G + DA LF M RN V WN+M+ + +G EE+ L +M
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 279
Query: 686 KAHGVE----PDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
+ PD T + VL C+ + + H K ++ E+ + L+D
Sbjct: 280 MEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
+ G A ++I M + ++G +GDT V +++A
Sbjct: 339 KCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 116/271 (42%), Gaps = 46/271 (16%)
Query: 46 HFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL----------- 94
H S + + W +++ ++D L H ++ S +PD F +L
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 95 ------------------------MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
+++Y CG L + LFD M D+ L+SWN+++ Y
Sbjct: 514 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 573
Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRL---TLAPLLKLCLSSGYVWASETVHGYALK 187
+G + R R+ + + +L ++ P+ C + H YALK
Sbjct: 574 QNGFPD--------RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
L D F++ +L+++Y+K G I ++ +F+G++E+ W M+ Y +G +E L
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 685
Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
F ++ R+G PDD + VL + G HE
Sbjct: 686 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHE 716
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 245/840 (29%), Positives = 385/840 (45%), Gaps = 158/840 (18%)
Query: 166 LKLCLS--SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQER 223
L+LCL + + VHG + G + L+++Y K ++ A+ LFD + E
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 224 DVVLWKVMLRAYAENG---FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
D + M+ Y +G VF ++ +C D
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFE------KAPVCMRD-------------------- 112
Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
V++N ++G+ D + AI F M + D+ TF LA
Sbjct: 113 ----------------TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156
Query: 341 AVA-GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRA 399
+A D+ Q H LKSG V N+L+++YSK
Sbjct: 157 GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK-------------------- 196
Query: 400 SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLA 458
+S P LH ++++ ++ D + T ++ Y +NG E L E D L
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERS----WTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
+NAMI GY+ +ALE+ M +SG LDE T + ++AC +L+ GKQ+HAY
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 519 MKS---GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTT------------ 563
++ F D + ++ +Y KCG +A++IF +PA D V+W
Sbjct: 313 LRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 564 -------------------MISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
MISG +NG + L ++ M+ G P ++ F+ +K+ +
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 605 CLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNA 664
L A G+Q HA L+K+ S G +L+ MYAKCG +E+A +F+ M ++V WNA
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKY 724
++ L QHG+G E + ++E+M G+ PD +T + VL+ACS+ GLV + + F M Y
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVY 548
Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWV 784
I P +HY+ L+D L R+G+ +A +I S+PF+ +A + ALL CRV G+ E G
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIA 608
Query: 785 AEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD-------------- 830
A+KL L P Y+LLSN+ AA QW++V R M+ + VKK+
Sbjct: 609 ADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHT 668
Query: 831 ---------PADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEE-EKERALYYHSEKLAR 880
A+ ++ ++ L K ++ GYVPDT FVL DVE + KE L HSEK+A
Sbjct: 669 FLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAV 728
Query: 881 AYGLISTPPSSVI---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
A+GL+ PP + I + ++ + + RFHH R+G C C +
Sbjct: 729 AFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGN 788
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 175/683 (25%), Positives = 298/683 (43%), Gaps = 118/683 (17%)
Query: 86 PDRFLTNNLMTMYSRCGSLVYARRLFDKMPD--RDLISWNSILAAYAHSGEG-NAENV-- 140
PD+ +++ Y G + AR +F+K P RD + +N+++ ++H+ +G +A N+
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 141 ---TEGFRLFRSLRESITFTSRLTLAPLL----KLCLSSGYVWASETVHGYALKIGLVWD 193
EGF+ ++ TF S L L+ K C+ H ALK G +
Sbjct: 138 KMKHEGFK-----PDNFTFASVLAGLALVADDEKQCVQ---------FHAAALKSGAGYI 183
Query: 194 EFVSGALVNIYSKFGK----IREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
VS ALV++YSK + A+ +FD + E+D W M+ Y +NG+
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY--------- 234
Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
DLG EE ++ ++N +V +N +SGY+
Sbjct: 235 ---------------------FDLG---EELLEG-------MDDNMKLVAYNAMISGYVN 263
Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
G A+E M+ S ++ D T+ + A A L LG+Q+H L+ +S
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHF 322
Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
NSL+++Y K G K AI A VS
Sbjct: 323 DNSLVSLYYKCG-----------------------------KFDEARAIFEKMPAKDLVS 353
Query: 430 -TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
AL+ Y +G + EA+ +F+ ++ +W MI G + + L+LFS M G
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
+ + A+K+C L G+Q HA +K GF+ L + ++ MY KCG + +A+
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473
Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
+F +P D V+W +I+ +G A+ +Y +M G+ PD T ++ A S
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGL 533
Query: 609 LEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
++QGR+ ++ ++ +D + L+D+ + G DA + + + + T +W A
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEA 591
Query: 665 MLVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMREK 723
+L G HGN E L + K G+ P+ T++ + + + TG E LMR++
Sbjct: 592 LLSGCRVHGNME--LGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Query: 724 --------YGIEPEVEHYSFLVD 738
IE E + ++FLVD
Sbjct: 650 GVKKEVACSWIEMETQVHTFLVD 672
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 27/243 (11%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S++R + L LGK HA +L F N+L+++Y +CG AR +F+KMP +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 118 DLISWNSILAAYAHSGE------------------------GNAENV--TEGFRLFRSLR 151
DL+SWN++L+ Y SG G AEN EG +LF ++
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
+ +K C G + H LKIG AL+ +Y+K G +
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 212 EAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVIS 271
EA+ +F M D V W ++ A ++G G E ++ ++ + G+ PD ++ VL S
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 272 DLG 274
G
Sbjct: 530 HAG 532
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 193/465 (41%), Gaps = 103/465 (22%)
Query: 76 HARILNSSQIPDRFLTNNLMTMYSRCGS----LVYARRLFDKMPDRDLISWNSILAAYAH 131
HA L S ++N L+++YS+C S L AR++FD++ ++D SW +++ Y
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 132 SG---------EGNAENVT------------------EGFRLFRSLRESITFTSRLTLAP 164
+G EG +N+ E + R + S T
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 165 LLKLCLSSGYVWASETVHGYALK------------IGLVW-----------------DEF 195
+++ C ++G + + VH Y L+ + L + +
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL 351
Query: 196 VS-GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
VS AL++ Y G I EAK +F M+E++++ W +M+ AENGFGEE LF + R
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
G P D + + + LG Q Y +LL +S++ N ++ Y +
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNG--QQYHAQLLKIGFDSSLSAGNALITMYAKC---- 465
Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
G +E + R+ DSV++ +AA LGQ HG +
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAA--------LGQHGHGA--------------EAV 503
Query: 375 NMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTV------ADSFV 428
++Y +M G+R D+ TL +VL A S L Q + +TV AD +
Sbjct: 504 DVYEEM-LKKGIRPDRITLLTVLTACSHAG----LVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLA-TWNAMIFGYILSNN 472
LID+ CR+G ++AE + E+ A W A++ G + N
Sbjct: 559 R--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 357 bits (915), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 231/739 (31%), Positives = 354/739 (47%), Gaps = 101/739 (13%)
Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRS-NV 328
+SDLG + YA + L +V L+N + G+ H ++ F ++ +S ++
Sbjct: 62 LSDLGAIY------YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDL 115
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM-------- 380
+ +S T+ A++A +G + G+ IHG + G S +++G++++ MY K
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 381 --------------GCVCGLRT----------------------DQFTLASVLRASSSLP 404
+ G R D TL +L A + L
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 405 EGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMI 464
E L L QIH A K + +V T I +Y + G + LF D+ +NAMI
Sbjct: 236 E-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
GY + + +L LF + SG RL T+ + V G L+++ +H Y +KS F
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFL 351
Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
VS+ + +Y K + A+ +F++ P +W MISG NG + A+S++ +M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
+ S P+ T ++ A + L AL G+ +H + D S +V +L+ MYAKCG+I
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
+A LF M +N V WN M+ G HG G+E L +F +M G+ P VTF+ VL AC
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
S+ GLV E E F+ M +YG EP V+HY+ +VD LGRAG + A + I +M E +S+
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
LLGACR+ DT + V+EKL L+P + +VLLSNI +A + + R K+
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
+ + K P I+ K+E L +++E GY P+T+ L D
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHD 711
Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEPLY-------------------- 901
VEEEE+E + HSE+LA A+GLI+T P + I K
Sbjct: 712 VEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIV 771
Query: 902 ---ANRFHHLRDGMCPCAD 917
ANRFHH +DG+C C D
Sbjct: 772 VRDANRFHHFKDGVCSCGD 790
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 148/625 (23%), Positives = 261/625 (41%), Gaps = 90/625 (14%)
Query: 52 SSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLF 111
S + + + + S S L THA+I+ D L L S G++ YAR +F
Sbjct: 19 SKNTYLDFFKRSTSISHL---AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 112 DKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLS 171
+ D+ +N ++ ++ + E+ +F LR+S + + +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVN-----ESPHSSLSVFAHLRKSTDLKPNSSTYAF-AISAA 129
Query: 172 SGYV--WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
SG+ A +HG A+ G + + +V +Y KF ++ +A+ +FD M E+D +LW
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189
Query: 230 VMLRAYAENGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIK 287
M+ Y +N E +F DL + S D ++ +L +++L + R Q+ + A K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Query: 288 LLLYNNN----------------------------SNVVLWNKKLSGYLQVGDNHGAIEC 319
Y+++ ++V +N + GY G+ ++
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309
Query: 320 FVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK 379
F ++ S + S T LV+L V+G +L L IHG LKS F S V +L +YSK
Sbjct: 310 FKELMLSGARLRSST-LVSLVPVSG--HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSK 366
Query: 380 MGCV---------------------------CGLRTDQFTLASVLRASSSLPE------- 405
+ + GL D +L ++ S P
Sbjct: 367 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 406 --------GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL 457
L L K +H D + +VSTALI +Y + GS+AEA LF+ +
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 458 ATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM-HA 516
TWN MI GY L +AL +F M SG +T + AC ++K+G ++ ++
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 517 YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEED 575
+ GFE + + ++D+ + G + A + P W T++ C + + +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 606
Query: 576 LALSIYHQMRLSGVVPDEFTFAILV 600
LA ++ +L + PD + +L+
Sbjct: 607 LARTV--SEKLFELDPDNVGYHVLL 629
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 162/388 (41%), Gaps = 52/388 (13%)
Query: 47 FSSSSSSSQWFSILRHAISTSDLLLGKSTHA---------------RILNSSQIPD---- 87
FS + S S+ H ++DL ST+A R+++ + D
Sbjct: 93 FSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152
Query: 88 -RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
L +N++ MY + + AR++FD+MP++D I WN++++ Y + E E ++
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN-----EMYVESIQV 207
Query: 147 FRSL-RESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
FR L ES T TL +L + +H A K G ++V +++YS
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSG---------- 255
K GKI+ LF ++ D+V + M+ Y NG E LF +L SG
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327
Query: 256 LCPDDESVQCVLGVISDLGK----RHEEQVQAY------------AIKLLLYNNNSNVVL 299
L P + + + K H A A KL + ++
Sbjct: 328 LVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 300 WNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTL 359
WN +SGY Q G AI F M +S + VT L+A A L+LG+ +H
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 360 KSGFYSAVIVGNSLINMYSKMGCVCGLR 387
+ F S++ V +LI MY+K G + R
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEAR 475
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 27 TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIP 86
T L ++SL +QKS FS + + IL L LGK H + ++
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTIT--CILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 87 DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRL 146
+++ L+ MY++CGS+ ARRLFD M ++ ++WN++++ Y G+G E +
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ-----EALNI 508
Query: 147 FRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYAL-KIGLVWDEFVSGALVNIYS 205
F + S + +T +L C +G V + + + + G +V+I
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 206 KFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
+ G ++ A + M E +W+ +L A
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 355 bits (911), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 361/710 (50%), Gaps = 95/710 (13%)
Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
+ WN ++ + GD G+I F M+ S V+ DS TF + + +++ G+Q+HG
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFTLASVLR--------ASSSLPE-G 406
LKSGF VGNSL+ Y K V R D+ T V+ S+ L E G
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 407 LHLSKQIHVHAIKND--TVADSFVSTA-----------------------------LIDV 435
L + Q+ V I+ D T+ F A L+D+
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
Y + G + A+ +F + ++ +MI GY + +A++LF M G D T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
+ C +L +GK++H + ++ D+ VS+ ++DMY KCG+M +A+ +F+++
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYH----QMRLSGVVPDEFTFAILVKASSCLTALEQ 611
D ++W T+I G N + ALS+++ + R S PDE T A ++ A + L+A ++
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVACVLPACASLSAFDK 517
Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
GR+IH +++ SD V SLVDMYAKCG + A++LF + ++ V W M+ G
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 672 HGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVE 731
HG G+E + LF M+ G+E D ++F+ +L ACS++GLV E + F++MR + IEP VE
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 732 HYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMAL 791
HY+ +VD L R G +A I +MP A++ ALL CR+ D + + VAEK+ L
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Query: 792 EPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFA---- 837
EP ++ YVL++NI+A A +W+ V R + ++ ++K+P ++ A
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 838 -----KVEGLIKRIK----EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
+E +++++ E GY P T + L+D EE EKE AL HSEKLA A G+IS+
Sbjct: 758 NPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSG 817
Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPC 915
+I L+ +E + +NRFH +DG C C
Sbjct: 818 HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
Score = 233 bits (593), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 195/679 (28%), Positives = 322/679 (47%), Gaps = 59/679 (8%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L+ + L GK I + + D L + L MY+ CG L A R+FD++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
+ WN ++ A SG+ + LF+ + S T + + K S V
Sbjct: 159 KALFWNILMNELAKSGD-----FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
E +HG+ LK G V +LV Y K ++ A+ +FD M ERDV+ W ++ Y
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISD-----LGKRHEEQVQAYAIKLLLYN 292
NG E+ +FV + SG+ D ++ V +D LG+ V + +K
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR----AVHSIGVKACFSR 329
Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLG 351
+ N L Y + GD A F M RS V Y S+ A +AG + + L
Sbjct: 330 EDR---FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG-EAVKLF 385
Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
+++ + Y+ V N C R L EG K
Sbjct: 386 EEMEEEGISPDVYTVTAVLN----------CCARYRL--------------LDEG----K 417
Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSN 471
++H +ND D FVS AL+D+Y + GSM EAE +F D+ +WN +I GY +
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 472 NSHKALELFSHMHTSGERL--DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
+++AL LF ++ +R DE T+A + AC L +G+++H Y M++G+ D V
Sbjct: 478 YANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
++ ++DMY KCGA++ A +F+DI + D V+WT MI+G +G A+++++QMR +G+
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596
Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDA 647
DE +F L+ A S +++G + N+++ +C +P V +VDM A+ G++ A
Sbjct: 597 EADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 648 YILFKQMDM-RNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSY 706
Y + M + + +W A+L G H + + K+ E K +EP++ + VL A Y
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE--KVFELEPENTGYY-VLMANIY 712
Query: 707 TGLVSEAYENFHLMREKYG 725
+E +E +R++ G
Sbjct: 713 AE--AEKWEQVKRLRKRIG 729
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 192/382 (50%), Gaps = 12/382 (3%)
Query: 379 KMGCVCG-LRTDQFTLASVLRA---SSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALID 434
K+ CV G D TL SVL+ S SL +G K++ N V DS + + L
Sbjct: 82 KLLCVSGKWDIDPRTLCSVLQLCADSKSLKDG----KEVDNFIRGNGFVIDSNLGSKLSL 137
Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
+Y G + EA +F+ WN ++ S + ++ LF M +SG +D T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
+ K+ L + G+Q+H + +KSGF V + ++ Y+K + A+ +F+++
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
D ++W ++I+G V NG + LS++ QM +SG+ D T + + + GR
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
+H+ +K S + +L+DMY+KCG+++ A +F++M R+ V + +M+ G A+ G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK-YGIEPEVEHY 733
E +KLFE+M+ G+ PD T VL+ C+ L+ E ++E G + V +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 734 SFLVDALGRAGRTKEAGELILS 755
L+D + G +EA EL+ S
Sbjct: 438 --LMDMYAKCGSMQEA-ELVFS 456
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 352 bits (904), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 230/762 (30%), Positives = 368/762 (48%), Gaps = 84/762 (11%)
Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
R L E+I RL+L LL+ C + + + VH + + + D + ++ +Y+
Sbjct: 28 RFLEETIP--RRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC 83
Query: 208 GKIREAKFLFDGMQER--DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
G + +F + R + W ++ ++ NG + + + G+ PD + C
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 266 VLG----------------VISDLGKRHEEQVQAYAIKLLLYNNNSNV------------ 297
++ +S LG E V + IK L +V
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 298 -VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
V+WN L+GY + G I+ F M + ++VTF L+ A ++LG Q+HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG---------------------CVC----------- 384
+ SG + NSL++MYSK G C+
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 385 -----------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALI 433
G+ D T +S+L + S E L KQIH + +++ D F+++ALI
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKF-ENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 434 DVY--CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLD 491
D Y CR SMA+ +F + D+ + AMI GY+ + +LE+F + +
Sbjct: 383 DAYFKCRGVSMAQN--IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 492 EITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFN 551
EIT+ + + G LL LK G+++H + +K GF+ + ++DMY KCG M A IF
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 552 DIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQ 611
+ D V+W +MI+ C + A+ I+ QM +SG+ D + + + A + L +
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560
Query: 612 GRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQ 671
G+ IH +IK +SD + +L+DMYAKCGN++ A +FK M +N V WN+++
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620
Query: 672 HGNGEETLKLFEDM-KAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
HG +++L LF +M + G+ PD +TF+ ++S+C + G V E F M E YGI+P+
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ 680
Query: 731 EHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMA 790
EHY+ +VD GRAGR EA E + SMPF A + LLGACR+ + E + + KLM
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740
Query: 791 LEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
L+P +S YVL+SN A A +W+ VT R MK + V+K P
Sbjct: 741 LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPG 782
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 221/512 (43%), Gaps = 45/512 (8%)
Query: 270 ISDLGKRHEEQVQAYAIKLLLYNNNSNVV-LWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
IS + KR + Y L L N++ + ++LS LQ N N++R
Sbjct: 3 ISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNP-------NLLRQGK 55
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQ-QIHGTTLKSG--FYS---------------AVIVG 370
Q + + +++ + TD LG + G+ G FY + V
Sbjct: 56 QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115
Query: 371 NSLIN----MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA-- 424
N L+N Y KM C G+ D T +++A +L K +DTV+
Sbjct: 116 NGLLNQALAFYFKMLCF-GVSPDVSTFPCLVKACVAL-------KNFKGIDFLSDTVSSL 167
Query: 425 ----DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELF 480
+ FV+++LI Y G + LF+ D WN M+ GY ++ F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 481 SHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
S M + +T + C L++ G Q+H + SG + + + + +L MY KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 541 GAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILV 600
G DA +F + D V W MISG V +G + +L+ +++M SGV+PD TF+ L+
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 601 KASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV 660
+ S LE +QIH +++ S D F+ +L+D Y KC + A +F Q + + V
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 661 LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLM 720
++ AM+ G +G ++L++F + + P+ +T + +L L + H
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL-LALKLGRELHGF 466
Query: 721 REKYGIEPEVEHYSFLVDALGRAGRTKEAGEL 752
K G + ++D + GR A E+
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 228/683 (33%), Positives = 347/683 (50%), Gaps = 78/683 (11%)
Query: 284 YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
YAI + N+++WN G+ D A++ +V MI + +S TF L + A
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
+ GQQIHG LK G + V SLI+MY + G R +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG-----RLED------------- 187
Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVS-TALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
H + + + VS TALI Y G + A+ LF+ D+ +WNA
Sbjct: 188 -----------AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
MI GY + N +ALELF M + R DE T+ T V AC ++ G+Q+H + G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH 582
F +L + + ++D+Y KCG + A +F +P D ++W T+I G AL ++
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL--DCSSDPFVGISLVDMYAK 640
+M SG P++ T ++ A + L A++ GR IH + K ++ + SL+DMYAK
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
CG+IE A+ +F + ++ WNAM+ G A HG + + LF M+ G++PD +TF+G+
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476
Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
LSACS++G++ F M + Y + P++EHY ++D LG +G KEA E+I M E
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP 536
Query: 761 SASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARG 820
+ +LL AC++ G+ E G+ AE L+ +EP + +YVLLSNI+A+A +W++V R
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRA 596
Query: 821 EMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDF 857
+ K +KK P I+ +E + +++ G+VPDT
Sbjct: 597 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Query: 858 VLLDVEEEEKERALYYHSEKLARAYGLISTPPSS--VILSN------------------K 897
VL ++EEE KE AL +HSEKLA A+GLIST P + I+ N K
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716
Query: 898 EPLYA---NRFHHLRDGMCPCAD 917
+ A RFHH RDG+C C D
Sbjct: 717 REIIARDRTRFHHFRDGVCSCND 739
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/559 (23%), Positives = 242/559 (43%), Gaps = 50/559 (8%)
Query: 164 PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN---IYSKFGKIREAKFLFDGM 220
P L L + + + +H +KIGL + L+ + F + A +F +
Sbjct: 35 PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-E 279
QE ++++W M R +A + L+V + GL P+ + VL + E +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 280 QVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVAL 339
Q+ + +KL + ++ + +S Y+Q G A + F + D V++ +
Sbjct: 155 QIHGHVLKL---GCDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALI 207
Query: 340 AAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG------------CVCGLR 387
A + Q++ V+ N++I+ Y++ G +R
Sbjct: 208 KGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 388 TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEY 447
D+ T+ +V+ A + + L +Q+H+ + ++ + ALID+Y + G + A
Sbjct: 264 PDESTMVTVVSACAQ-SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 448 LFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLM 507
LFE D+ +WN +I GY N +AL LF M SGE +++T+ + + AC L
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 508 LKQGKQMHAYAMK--SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
+ G+ +H Y K G + + ++DMY KCG + A +FN I +W MI
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
G +G D + ++ +MR G+ PD+ TF L+ A S L+ GR I + + D
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ-DYK 501
Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMR--------NTVLWNAMLVGLAQHGNG 675
P + ++D+ G LFK+ + + V+W ++L HGN
Sbjct: 502 MTPKLEHYGCMIDLLGHSG-------LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 676 EETLKLFEDMKAHGVEPDS 694
E E++ +EP++
Sbjct: 555 ELGESFAENLIK--IEPEN 571
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 57/343 (16%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
G+ H +L D ++ +L++MY + G L A ++FDK P RD++S+ +++ YA
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 132 SG------------------------EGNAE--NVTEGFRLFRSLRESITFTSRLTLAPL 165
G G AE N E LF+ + ++ T+ +
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 166 LKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDV 225
+ C SG + VH + G + + AL+++YSK G++ A LF+ + +DV
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 226 VLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG----------- 274
+ W ++ Y +E LF ++ RSG P+D ++ +L + LG
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 275 --KRHEEQVQAYAIKLLLYNNNS------------NVVL------WNKKLSGYLQVGDNH 314
KR + A +++ L + + N +L WN + G+ G
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
+ + F M + +Q D +TF+ L+A + + L+LG+ I T
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 71 LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
LG+ H I + + + N L+ +YS+CG L A LF+++P +D+ISWN+++ Y
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK--I 188
H E LF+ + S + +T+ +L C G + +H Y K
Sbjct: 344 H-----MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
G+ + +L+++Y+K G I A +F+ + + + W M+ +A +G + F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 249 VDLHRSGLCPDDESVQCVLGVIS-----DLGK 275
+ + G+ PDD + +L S DLG+
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 314/560 (56%), Gaps = 53/560 (9%)
Query: 411 KQIHVHAIKND-TVADSFVSTALIDVYCRNGS---MAEAEYLFEN-KDGFDLATWNAMIF 465
+QIH +I++ +++D+ + LI S M+ A +F + ++ WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 466 GYILSNNSHKALELFSHMHTSG-ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
GY NS A L+ M SG D T +KA + ++ G+ +H+ ++SGF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 525 LDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQM 584
+ V + +L +Y CG + A +F+ +P D VAW ++I+G +NG+ + AL++Y +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
G+ PD FT L+ A + + AL G+++H +IK+ + + L+D+YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA-HGVEPDSVTFIGVLSA 703
E+A LF +M +N+V W +++VGLA +G G+E ++LF+ M++ G+ P +TF+G+L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
CS+ G+V E +E F MRE+Y IEP +EH+ +VD L RAG+ K+A E I SMP + +
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
+ R LLGAC V GD++ ++ +++ LEP S YVLLSN++A+ +W DV R +M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 824 RKNVKKDP-----------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLL 860
R VKK P +D I+AK++ + R++ GYVP V +
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 861 DVEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEP 899
DVEEEEKE A+ YHSEK+A A+ LISTP S I + N+E
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 900 LYAN--RFHHLRDGMCPCAD 917
+ + RFHH ++G C C D
Sbjct: 574 VVRDRSRFHHFKNGSCSCQD 593
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 177/332 (53%), Gaps = 12/332 (3%)
Query: 369 VGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADS 426
+GNS+ ++Y +M + D T +++A +++ + + L + IH I++ +
Sbjct: 98 IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD-VRLGETIHSVVIRSGFGSLI 156
Query: 427 FVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTS 486
+V +L+ +Y G +A A +F+ DL WN++I G+ + +AL L++ M++
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216
Query: 487 GERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDA 546
G + D TI + + AC + L GK++H Y +K G +L S+ +LD+Y +CG + +A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 547 QSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLS-GVVPDEFTFAILVKASSC 605
+++F+++ + V+WT++I G NG A+ ++ M + G++P E TF ++ A S
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 606 LTALEQGRQIHANL---IKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVL 661
+++G + + K++ + F +VD+ A+ G ++ AY K M M+ N V+
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFG--CMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 662 WNAMLVGLAQHGNGEETLKLFEDMKAHGVEPD 693
W +L HG+ + L F ++ +EP+
Sbjct: 395 WRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 7/220 (3%)
Query: 57 FSILRHAIST-SDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
+ L A++T +D+ LG++ H+ ++ S ++ N+L+ +Y+ CG + A ++FDKMP
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
++DL++WNS++ +A +G+ E L+ + T+ LL C G +
Sbjct: 184 EKDLVAWNSVINGFAENGKPE-----EALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
+ VH Y +K+GL + S L+++Y++ G++ EAK LFD M +++ V W ++
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 236 AENGFGEEVFHLFVDLHRS-GLCPDDESVQCVLGVISDLG 274
A NGFG+E LF + + GL P + + +L S G
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 173/417 (41%), Gaps = 65/417 (15%)
Query: 57 FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
FSI RH +S SD LGK +++ P + YA ++F K+
Sbjct: 39 FSI-RHGVSISDAELGKHLIFYLVSLPSPP----------------PMSYAHKVFSKIEK 81
Query: 117 R-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP-LLKLCLSSGY 174
++ WN+++ YA G N F L+R +R S P L+K +
Sbjct: 82 PINVFIWNTLIRGYAEIG-----NSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD 136
Query: 175 VWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRA 234
V ET+H ++ G +V +L+++Y+ G + A +FD M E+D+V W ++
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196
Query: 235 YAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIKLLLYNN 293
+AENG EE L+ +++ G+ PD ++ +L + +G ++V Y IK+ L N
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 294 --NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
+SNV+ L Y + G A F M+ N + +V LA
Sbjct: 257 LHSSNVL-----LDLYARCGRVEEAKTLFDEMVDKN-SVSWTSLIVGLAV---------- 300
Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS---LPEGLH 408
+GF G I ++ M GL + T +L A S + EG
Sbjct: 301 ---------NGF------GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 409 LSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA-EYLFENKDGFDLATWNAMI 464
+++ K + + F ++D+ R G + +A EY+ ++ W ++
Sbjct: 346 YFRRMR-EEYKIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L L LGK H ++ + +N L+ +Y+RCG + A+ LFD+M D+
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI-TFTSRLTLAPLLKLC-----LS 171
+ +SW S++ A +G G E LF+ + + +T +L C +
Sbjct: 287 NSVSWTSLIVGLAVNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 341
Query: 172 SGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM-QERDVVLWKV 230
G+ + Y KI + F G +V++ ++ G++++A M + +VV+W+
Sbjct: 342 EGFEYFRRMREEY--KIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 231 MLRAYAENG 239
+L A +G
Sbjct: 398 LLGACTVHG 406
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 345 bits (884), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 244/756 (32%), Positives = 368/756 (48%), Gaps = 127/756 (16%)
Query: 273 LGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR-SNVQY- 330
L + + Q+Q K LL +S++ WN +S Y++ G + A+ F M R S+V Y
Sbjct: 40 LKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN 99
Query: 331 -------------------------DSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
D V++ V + NL +++ +
Sbjct: 100 GMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD--- 156
Query: 366 AVIVGNSLINMYSKMGCVCGLRT--DQF---------TLASVLRASSSLPEGLHLSKQIH 414
V N++++ Y++ GCV R+ D+ L S +S + E L K
Sbjct: 157 -VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 415 VHA-----------IKNDTVADS---FVSTALIDV---------YCRNGSMAEAEYLFEN 451
A +K + ++ F S + DV Y ++G + EA LF+
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
D+ TW AM+ GYI + +A ELF M E +A V QG
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV----------QG 325
Query: 512 KQMHAYAMKSGFELDLCVS----SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
++M K F++ C + + ++ Y +CG + +A+++F+ +P D V+W MI+G
Sbjct: 326 ERMEM--AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 568 CVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSD 627
+G AL ++ QM G + +F+ + + + ALE G+Q+H L+K +
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 628 PFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
FVG +L+ MY KCG+IE+A LFK+M ++ V WN M+ G ++HG GE L+ FE MK
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 688 HGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTK 747
G++PD T + VLSACS+TGLV + + F+ M + YG+ P +HY+ +VD LGRAG +
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 748 EAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFA 807
+A L+ +MPFE A++ LLGA RV G+TE + A+K+ A+EP +S YVLLSN++A
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 808 AANQWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIK 844
++ +W DV R M+ K VKK P D IFA +E L
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683
Query: 845 RIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLI---STPPSSVILS------ 895
R+K+ GYV T VL DVEEEEKER + YHSE+LA AYG++ S P VI +
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743
Query: 896 --NKEPLYA------------NRFHHLRDGMCPCAD 917
N A NRFHH +DG C C D
Sbjct: 744 CHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGD 779
Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 168/624 (26%), Positives = 276/624 (44%), Gaps = 86/624 (13%)
Query: 71 LGKSTHARILNSSQIP-------DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWN 123
L ++T +I S P D N ++ Y R G A R+F +MP +S+N
Sbjct: 40 LKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN 99
Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW------A 177
+++ Y +GE F L R L + + ++ ++K GYV A
Sbjct: 100 GMISGYLRNGE---------FELARKLFDEMPERDLVSWNVMIK-----GYVRNRNLGKA 145
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
E + W+ +SG Y++ G + +A+ +FD M E++ V W +L AY +
Sbjct: 146 RELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
N EE LF L S C+LG K E A + N +V
Sbjct: 201 NSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVE------ARQFFDSMNVRDV 250
Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGT 357
V WN ++GY Q G A + F S VQ D T+ T
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLF---DESPVQ-DVFTW---------------------T 285
Query: 358 TLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHA 417
+ SG+ +V + ++ KM ++ + ++L A E + ++K++
Sbjct: 286 AMVSGYIQNRMVEEAR-ELFDKMP-----ERNEVSWNAML-AGYVQGERMEMAKELF--- 335
Query: 418 IKNDTVADSFVST--ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHK 475
D + VST +I Y + G ++EA+ LF+ D +W AMI GY S +S +
Sbjct: 336 ---DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 476 ALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILD 535
AL LF M G RL+ + ++A+ C ++ L+ GKQ+H +K G+E V + +L
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
MY KCG++ +A +F ++ D V+W TMI+G +G ++AL + M+ G+ PD+ T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQ 653
++ A S +++GRQ + + D P +VD+ + G +EDA+ L K
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQ-DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 654 MDMR-NTVLWNAMLVGLAQHGNGE 676
M + +W +L HGN E
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTE 595
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 241/537 (44%), Gaps = 45/537 (8%)
Query: 55 QWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLT--NNLMTMYSRCGSLVYARRLFD 112
+W S+ + + + L G+ AR L ++P+R L N ++ Y R +L AR LF+
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKL-FDEMPERDLVSWNVMIKGYVRNRNLGKARELFE 150
Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
MP+RD+ SWN++L+ YA +G V + +F + E + L+ ++
Sbjct: 151 IMPERDVCSWNTMLSGYAQNG-----CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKME 205
Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
++ +AL + W+ + G + K KI EA+ FD M RDVV W ++
Sbjct: 206 EACMLFKSRENWAL---VSWNCLLGG-----FVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYN 292
YA++G +E LF D+ VQ V + + + ++ A +L
Sbjct: 258 TGYAQSGKIDEARQLF----------DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
N V WN L+GY+Q A E F M NV T+ + A ++ +
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAK 363
Query: 353 QIHGTTLKSG--FYSAVIVGNS-------LINMYSKMGCVCGLRTDQFTLASVLRASSSL 403
+ K ++A+I G S + ++ +M G R ++ + +S L + +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADV 422
Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
L L KQ+H +K FV AL+ +YC+ GS+ EA LF+ G D+ +WN M
Sbjct: 423 V-ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
I GY AL F M G + D+ T+ + AC ++ +G+Q + Y M +
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YFYTMTQDY 540
Query: 524 EL--DLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
+ + + ++D+ + G + DA ++ ++P PD W T++ +G +LA
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 37 SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
+L F+Q + S + S L L LGK H R++ F+ N L+
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 97 MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITF 156
MY +CGS+ A LF +M +D++SWN+++A Y+ G G R F S++
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV-----ALRFFESMKREGLK 507
Query: 157 TSRLTLAPLLKLCLSSGYV-WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
T+ +L C +G V + + G++ + +V++ + G + +A
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567
Query: 216 LFDGMQ-ERDVVLWKVMLRAYAENGFGE 242
L M E D +W +L A +G E
Sbjct: 568 LMKNMPFEPDAAIWGTLLGASRVHGNTE 595
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 246/879 (27%), Positives = 411/879 (46%), Gaps = 124/879 (14%)
Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWD-EFVSGALVNIYSKFGKIREAKFLFDGM 220
A +L+LC V +H K ++ +F++G LV +Y K G + +A+ +FD M
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-RHEE 279
+R W M+ AY NG L+ ++ G+ S +L + L R
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 280 QVQAYAIKL-------------LLYNNNSNV----------------VLWNKKLSGYLQV 310
++ + +KL +Y N ++ VLWN LS Y
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 311 GDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSA-VIV 369
G + +E F M + +S T + AL A G LG++IH + LKS +S+ + V
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 370 GNSLINMYSKMG-------------------------------------------CVCGL 386
N+LI MY++ G G
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
++D+ ++ S++ AS L L ++H + IK+ ++ V LID+Y +
Sbjct: 383 KSDEVSMTSIIAASGRL-SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 441
Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
F DL +W +I GY ++ +ALELF + +DE+ + + ++A L
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501
Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
+ K++H + ++ G LD + + ++D+Y KC M A +F I D V+WT+MIS
Sbjct: 502 SMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMIS 560
Query: 567 GCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSS 626
NG E A+ ++ +M +G+ D ++ A++ L+AL +GR+IH L++
Sbjct: 561 SSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 620
Query: 627 DPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMK 686
+ + +++VDMYA CG+++ A +F +++ + + + +M+ HG G+ ++LF+ M+
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 680
Query: 687 AHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRT 746
V PD ++F+ +L ACS+ GL+ E +M +Y +EP EHY LVD LGRA
Sbjct: 681 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740
Query: 747 KEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIF 806
EA E + M E +A + ALL ACR + E G+ A++L+ LEP + VL+SN+F
Sbjct: 741 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 800
Query: 807 AAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAKVEGLI 843
A +W+DV R +MK ++K P + I+ K+ +
Sbjct: 801 AEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVT 860
Query: 844 KRI-KEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---- 898
+++ +E GYV DT FVL +V+E EK + L+ HSE++A AYGL+ TP + + K
Sbjct: 861 RKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVC 920
Query: 899 -----------PLY--------ANRFHHLRDGMCPCADN 918
L+ ANRFHH G+C C D+
Sbjct: 921 RDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDS 959
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 200/732 (27%), Positives = 332/732 (45%), Gaps = 99/732 (13%)
Query: 30 NLPSFSLSLLPFLQKSHFSSSSSSSQWFSIL------RHAISTSDLLLGKSTHARILNS- 82
L F L Q+ S ++S + F+ + R A+S G+ H+RI +
Sbjct: 56 KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQ-----GRQLHSRIFKTF 110
Query: 83 SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTE 142
FL L+ MY +CGSL A ++FD+MPDR +WN+++ AY +GE
Sbjct: 111 PSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEP-----AS 165
Query: 143 GFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVN 202
L+ ++R + LLK C + + +H +K+G F+ ALV+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 203 IYSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
+Y+K + A+ LFDG QE+ D VLW +L +Y+ +G E LF ++H +G P+
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 262 SVQCVLGVI-----SDLGKRHEEQV-------------------------QAYAIKLLLY 291
++ L + LGK V A ++L
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 292 NNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLG 351
NN++VV WN + GY+Q A+E F +MI + + D V+ +AA NL G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 352 QQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC--------------------------- 384
++H +K G+ S + VGN+LI+MYSK C
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
+ D+ L S+LRASS L L + K+IH H ++ + D+ +
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML-IVKEIHCHILRKGLL-DTVI 523
Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
L+DVY + +M A +FE+ G D+ +W +MI L+ N +A+ELF M +G
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
D + + + A L L +G+++H Y ++ GF L+ ++ ++DMY CG + A++
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
+F+ I + +T+MI+ +G A+ ++ +MR V PD +F L+ A S
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 703
Query: 609 LEQGR---QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTV-LWNA 664
L++GR +I + +L+ + +V LVDM + + +A+ K M T +W A
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEHYV--CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761
Query: 665 MLVGLAQHGNGE 676
+L H E
Sbjct: 762 LLAACRSHSEKE 773
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 129/243 (53%), Gaps = 7/243 (2%)
Query: 478 ELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS--GFELDLCVSSGILD 535
E F + S A ++ CG + QG+Q+H+ K+ FELD ++ ++
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVF 124
Query: 536 MYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFT 595
MY KCG++ DA+ +F+++P AW TMI V NGE AL++Y MR+ GV +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 596 FAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMD 655
F L+KA + L + G ++H+ L+KL S F+ +LV MYAK ++ A LF
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 656 MR-NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC---SYTGLVS 711
+ + VLWN++L + G ETL+LF +M G P+S T + L+AC SY L
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 712 EAY 714
E +
Sbjct: 305 EIH 307
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 185/395 (46%), Gaps = 20/395 (5%)
Query: 379 KMGCVCGLRTDQFTLASVLRASSSLP------------EGLHLSKQIHVHAIKN-DTVAD 425
K+ C G+ T+ F V +S + + +Q+H K +
Sbjct: 56 KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL 115
Query: 426 SFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
F++ L+ +Y + GS+ +AE +F+ WN MI Y+ + AL L+ +M
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
G L + +KAC L ++ G ++H+ +K G+ + + ++ MY K +
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 546 AQSIFNDIPAPDD-VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASS 604
A+ +F+ D V W +++S +G+ L ++ +M ++G P+ +T + A
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 605 CLTALEQGRQIHANLIKLDC-SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
+ + G++IHA+++K SS+ +V +L+ MY +CG + A + +QM+ + V WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSE--AYENFHLMR 721
+++ G Q+ +E L+ F DM A G + D V+ +++A +G +S A H
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA---SGRLSNLLAGMELHAYV 412
Query: 722 EKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSM 756
K+G + ++ + L+D + T G L M
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Score = 42.0 bits (97), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 20/181 (11%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
G+ H +L + + ++ MY+ CG L A+ +FD++ + L+ + S++ AY
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665
Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC-----LSSGYVWASETVHGYAL 186
G G A LF +R ++ LL C L G + H Y L
Sbjct: 666 HGCGKA-----AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720
Query: 187 KIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVML---RAYAENGFG 241
+ W E LV++ + + EA F F M E +W +L R+++E G
Sbjct: 721 E---PWPEHYV-CLVDMLGRANCVVEA-FEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 775
Query: 242 E 242
E
Sbjct: 776 E 776
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 343 bits (881), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/554 (35%), Positives = 299/554 (53%), Gaps = 46/554 (8%)
Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
+K H I+ D D + LI+ Y + G + A +F+ L +WN MI Y
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
+ +AL++F M G + E TI++ + ACG + K++H ++K+ +L+L V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
+ +LD+Y KCG + DA +F + V W++M++G V N + AL +Y + + +
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYI 649
++FT + ++ A S L AL +G+Q+HA + K S+ FV S VDMYAKCG++ ++YI
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 650 LFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGL 709
+F ++ +N LWN ++ G A+H +E + LFE M+ G+ P+ VTF +LS C +TGL
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 710 VSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALL 769
V E F LMR YG+ P V HYS +VD LGRAG EA ELI S+PF+ +AS+ +LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 770 GACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKK 829
+CRV + E + AEKL LEP ++ +VLLSNI+AA QW+++ +R ++ +VKK
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 499
Query: 830 -------DPADL----------------IFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEE 866
D D I + ++ L+ + ++ GY P + L DVE +
Sbjct: 500 VRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGK 559
Query: 867 KERALYYHSEKLARAYGLISTPPSS---------VILSNKEPLYA--------------N 903
KE L HSEKLA +GL+ P SS + + E + A N
Sbjct: 560 KEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVN 619
Query: 904 RFHHLRDGMCPCAD 917
RFHH DG C C D
Sbjct: 620 RFHHFSDGHCSCGD 633
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
+ K H ++ E D+ + + +++ Y KCG + A+ +F+ + V+W TMI
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
N E AL I+ +MR G EFT + ++ A + +++H +K + +
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG 689
VG +L+D+YAKCG I+DA +F+ M +++V W++M+ G Q+ N EE L L+ +
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 690 VEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
+E + T V+ ACS + E + H + K G V S VD + G +E+
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 192/476 (40%), Gaps = 103/476 (21%)
Query: 124 SILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHG 183
S+LA+Y + E V+ G R S F++R + +L+LC +G V ++ HG
Sbjct: 39 SVLASY------DQEEVSPG-------RYSNEFSNRNLVHEILQLCARNGAVMEAKACHG 85
Query: 184 YALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEE 243
++I L D + L+N YSK G + A+ +FDGM ER +V W M+ Y N E
Sbjct: 86 KIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESE 145
Query: 244 VFHLFVDLHRSGLCPDDESVQCVL---GVISD---LGKRHEEQVQAY------------- 284
+F+++ G + ++ VL GV D K H V+
Sbjct: 146 ALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLD 205
Query: 285 ----------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
A+++ + + V W+ ++GY+Q + A+ + R +++ + T
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLA 394
+ A + L G+Q+H KSGF S V V +S ++MY+K CG + + +
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK----CGSLRESYIIF 321
Query: 395 SVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDG 454
S ++ KN + ++ +S + ++ E LFE
Sbjct: 322 SEVQE-------------------KNLELWNTIISG-----FAKHARPKEVMILFEK--- 354
Query: 455 FDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQM 514
M G +E+T ++ + CG ++++G++
Sbjct: 355 ----------------------------MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Query: 515 HAYAMKS-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGC 568
+ G ++ S ++D+ + G + +A + IP P W ++++ C
Sbjct: 387 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 34/324 (10%)
Query: 59 ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
IL+ ++ K+ H +I+ D L N L+ YS+CG + AR++FD M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
L+SWN+++ Y + +E +F +R S T++ +L C +
Sbjct: 127 LVSWNTMIGLYTRN-----RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 179 ETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
+ +H ++K + + +V AL+++Y+K G I++A +F+ MQ++ V W M+ Y +N
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIKLLLYNN---- 293
EE L+ R L + ++ V+ S+L E +Q+ A K +N
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 294 ------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ 329
N+ LWN +SG+ + + F M + +
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 330 YDSVTFLVALAAVAGTDNLNLGQQ 353
+ VTF L+ T + G++
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRR 385
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L D L K H + + + ++ L+ +Y++CG + A ++F+ M D+
Sbjct: 167 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
++W+S++A Y + +N E L+R + ++ TL+ ++ C + +
Sbjct: 227 SSVTWSSMVAGYVQN-----KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +H K G + FV+ + V++Y+K G +RE+ +F +QE+++ LW ++ +A+
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNV 297
+ +EV LF + + G+ P++ + +L V G EE + + + Y + NV
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV-EEGRRFFKLMRTTYGLSPNV 400
Query: 298 V 298
V
Sbjct: 401 V 401
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 608 ALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLV 667
A+ + + H +I++D D + L++ Y+KCG +E A +F M R+ V WN M +
Sbjct: 76 AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM-I 134
Query: 668 GLAQHGNGE-ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE--NFHLMREKY 724
GL E E L +F +M+ G + T VLSAC G+ +A E H + K
Sbjct: 135 GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKT 191
Query: 725 GIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
I+ + + L+D + G K+A ++ SM ++S + + G
Sbjct: 192 CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 18 VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
V +SS +N ++ +LL + + S + S++ + + L+ GK HA
Sbjct: 229 VTWSSMVAGYVQN-KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287
Query: 78 RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
I S + F+ ++ + MY++CGSL + +F ++ +++L WN+I++ +A
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK- 346
Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
E LF +++ + +T + LL +C +G V
Sbjct: 347 ----EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/649 (30%), Positives = 319/649 (49%), Gaps = 117/649 (18%)
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
GL D L ++ + + L + KQIH + + D+FV ++ +Y R G M +
Sbjct: 111 GLIPDSHVLPNLFKVCAEL-SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 445 AEYLFENKDGFDLAT-----------------------------------WNAMIFGYIL 469
A +F+ D+ T WN ++ G+
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
S +A+ +F +H G D++T+++ + + G ML G+ +H Y +K G D CV
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDD------------------------------- 558
S ++DMY K G + S+FN +
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 559 ----VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
V+WT++I+GC NG++ AL ++ +M+++GV P+ T ++ A + AL GR
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409
Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
H +++ + VG +L+DMYAKCG I + I+F M +N V WN+++ G + HG
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYS 734
+E + +FE + ++PD ++F +LSAC GL E ++ F +M E+YGI+P +EHYS
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529
Query: 735 FLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPF 794
+V+ LGRAG+ +EA +LI MPFE + + ALL +CR+Q + + + AEKL LEP
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589
Query: 795 DSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA---------------------- 832
+ YVLLSNI+AA W +V S R +M+ +KK+P
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Query: 833 -DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP--- 888
D I K++ + K +++ G+ P+ DF L DVEE+E+E+ L+ HSEKLA +GL++TP
Sbjct: 650 IDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709
Query: 889 PSSVI------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
P VI + +E NRFHH +DG+C C D
Sbjct: 710 PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758
Score = 186 bits (472), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 145/601 (24%), Positives = 268/601 (44%), Gaps = 82/601 (13%)
Query: 75 THARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGE 134
HARIL S D +++ L+ YS A + +PD + S++S++ A
Sbjct: 37 AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT---- 92
Query: 135 GNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE 194
A+ T+ +F + L L K+C + +H + GL D
Sbjct: 93 -KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 195 FVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRS 254
FV G++ ++Y + G++ +A+ +FD M ++DVV +L AYA G EEV + ++ S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 255 GLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
G+ +N+V WN LSG+ + G +
Sbjct: 212 GI-------------------------------------EANIVSWNGILSGFNRSGYHK 234
Query: 315 GAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLI 374
A+ F + D VT L +V ++ LN+G+ IHG +K G V +++I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 375 NMYSKMGCVCGLRT--DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTAL 432
+MY K G V G+ + +QF + ++ V A
Sbjct: 295 DMYGKSGHVYGIISLFNQFEM------------------------------MEAGVCNAY 324
Query: 433 IDVYCRNGSMAEAEYLF----ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
I RNG + +A +F E ++ +W ++I G + +ALELF M +G
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
+ + +TI + + ACG + L G+ H +A++ ++ V S ++DMY KCG + +Q
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
+FN +P + V W ++++G +G+ +SI+ + + + PD +F L+ A +
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAM 665
++G + + ++ + P + +V++ + G +++AY L K+M ++ +W A+
Sbjct: 505 TDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 666 L 666
L
Sbjct: 564 L 564
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 160/354 (45%), Gaps = 36/354 (10%)
Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
+ Q H +K+ D ++S LI Y +A+ + ++ + +++++I+
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
+ +++ +FS M + G D + K C L K GKQ+H + SG ++D V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPD-------------------------------- 557
+ MY++CG M DA+ +F+ + D
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 558 ---DVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
V+W ++SG +G A+ ++ ++ G PD+ T + ++ + L GR
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 615 IHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGN 674
IH +IK D V +++DMY K G++ LF Q +M + NA + GL+++G
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 675 GEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
++ L++FE K +E + V++ +++ C+ G EA E F M + G++P
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP 386
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 67/341 (19%)
Query: 71 LGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
+GK H S D F+ ++ MY RCG + AR++FD+M D+D+++ +++L AYA
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 131 HSG-----------------EGNA---ENVTEGFRLFRSLRESITFTSRL---------- 160
G E N + GF +E++ ++
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
T++ +L S + +HGY +K GL+ D+ V A++++Y K G + LF+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
+ + + + + NG ++ +F +L K +
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMF-----------------------ELFKEQTME 350
Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
+ NVV W ++G Q G + A+E F M + V+ + VT L
Sbjct: 351 L--------------NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMG 381
A L G+ HG ++ V VG++LI+MY+K G
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 13/217 (5%)
Query: 70 LLGKSTHA----RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR----DLIS 121
+ GKS H + N ++ + + N +T SR G + A +F+ ++ +++S
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 122 WNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETV 181
W SI+A A +G+ E LFR ++ + + +T+ +L C + + +
Sbjct: 356 WTSIIAGCAQNGKD-----IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 182 HGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFG 241
HG+A+++ L+ + V AL+++Y+K G+I ++ +F+ M +++V W ++ ++ +G
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 242 EEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHE 278
+EV +F L R+ L PD S +L +G E
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 247/853 (28%), Positives = 400/853 (46%), Gaps = 134/853 (15%)
Query: 87 DRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG------EGNAENV 140
+R LT + Y R S Y +++ +++ + A G + +A +
Sbjct: 18 NRCLTEKIS--YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMI 75
Query: 141 TEGFRLFRSLRESITFTSRLTLAPLLKLCLSS-GYVWASETVHGYALKIGLVWDEFVSGA 199
GFR + L LL++ +S +V AS L+ + W++ ++G
Sbjct: 76 ISGFR-----------PTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING- 123
Query: 200 LVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
YSK + +A F+ M RDVV W ML Y +NG + +FVD+ R G+ D
Sbjct: 124 ----YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 260 DESVQCVLGVISDL----------------------------------GKRHEEQVQAYA 285
+ +L V S L GKR E +
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE-----S 234
Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGT 345
+++ N V W+ ++G +Q A++ F M + N + L + A
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV---------------------- 383
L LG Q+H LKS F + IV + ++MY+K +
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 384 ---------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
GL D+ +L+ V RA + L +GL QI+ AIK+
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA-LVKGLSEGLQIYGLAIKSSL 413
Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
D V+ A ID+Y + ++AEA +F+ D +WNA+I + + ++ L LF
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 483 MHTSGERLDEITIATAVKAC--GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKC 540
M S DE T + +KAC G L G ++H+ +KSG + V ++DMY KC
Sbjct: 474 MLRSRIEPDEFTFGSILKACTGGSL---GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 530
Query: 541 GAMVDAQSIFNDIPAPDDVA--------------------WTTMISGCVDNGEEDLALSI 580
G + +A+ I + +V+ W ++ISG V + + A +
Sbjct: 531 GMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQML 590
Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAK 640
+ +M G+ PD+FT+A ++ + L + G+QIHA +IK + SD ++ +LVDMY+K
Sbjct: 591 FTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSK 650
Query: 641 CGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGV 700
CG++ D+ ++F++ R+ V WNAM+ G A HG GEE ++LFE M ++P+ VTFI +
Sbjct: 651 CGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710
Query: 701 LSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEA 760
L AC++ GL+ + E F++M+ YG++P++ HYS +VD LG++G+ K A ELI MPFEA
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 761 SASMHRALLGACRV-QGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
+ R LLG C + + + E + L+ L+P DSSAY LLSN++A A W+ V+ R
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830
Query: 820 GEMKRKNVKKDPA 832
M+ +KK+P
Sbjct: 831 RNMRGFKLKKEPG 843
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 321/612 (52%), Gaps = 64/612 (10%)
Query: 364 YSAVIVGNSLIN-------MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
++A+I G S N MYS M + + D FT +L+A S L L + + +H
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQ-LARVSPDSFTFPHLLKACSGLSH-LQMGRFVHAQ 144
Query: 417 AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDL-----ATWNAMIFGYILSN 471
+ AD FV LI +Y + + A +FE G L +W A++ Y +
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE---GLPLPERTIVSWTAIVSAYAQNG 201
Query: 472 NSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSS 531
+ALE+FS M + D + + + + A CL LKQG+ +HA +K G E++ +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
+ MY KCG + A+ +F+ + +P+ + W MISG NG A+ ++H+M V P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILF 651
D + + A + + +LEQ R ++ + + D D F+ +L+DM+AKCG++E A ++F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 652 KQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVS 711
+ R+ V+W+AM+VG HG E + L+ M+ GV P+ VTF+G+L AC+++G+V
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 712 EAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGA 771
E + F+ M + + I P+ +HY+ ++D LGRAG +A E+I MP + ++ ALL A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 772 CRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP 831
C+ E G++ A++L +++P ++ YV LSN++AAA WD V R MK K + KD
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 832 A-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKE 868
+ I +VE + R+KEGG+V + D L D+ +EE E
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620
Query: 869 RALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPLY--ANRF 905
L HSE++A AYGLISTP + + L ++E + NRF
Sbjct: 621 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 680
Query: 906 HHLRDGMCPCAD 917
HH +DG+C C D
Sbjct: 681 HHFKDGVCSCGD 692
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 5/342 (1%)
Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
KQIH + F+ T LI G + A +F++ + WNA+I GY +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
N+ AL ++S+M + D T +KAC L L+ G+ +HA + GF+ D+ V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDD--VAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
+G++ +Y KC + A+++F +P P+ V+WT ++S NGE AL I+ QMR
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
V PD ++ A +CL L+QGR IHA+++K+ +P + ISL MYAKCG + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTG 708
ILF +M N +LWNAM+ G A++G E + +F +M V PD+++ +SAC+ G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 709 LVSEAYENF-HLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
+ +A + ++ R Y +V S L+D + G + A
Sbjct: 338 SLEQARSMYEYVGRSDY--RDDVFISSALIDMFAKCGSVEGA 377
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 36/346 (10%)
Query: 73 KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
K HAR+L FL L+ S G + +AR++FD +P + WN+I+ Y+ +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
+ + ++ +++ + T LLK C ++ VH ++G
Sbjct: 98 -----NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQ--ERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
D FV L+ +Y+K ++ A+ +F+G+ ER +V W ++ AYA+NG E +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 251 LHRSGLCPDDESVQCVLGVISDLGK-RHEEQVQAYAIKL-------LLYNNNS------- 295
+ + + PD ++ VL + L + + A +K+ LL + N+
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 296 --------------NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
N++LWN +SGY + G AI+ F MI +V+ D+++ A++A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
A +L + ++ +S + V + ++LI+M++K G V G R
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 510 QGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCV 569
Q KQ+HA + G + + + ++ G + A+ +F+D+P P W +I G
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 570 DNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF 629
N AL +Y M+L+ V PD FTF L+KA S L+ L+ GR +HA + +L +D F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 630 VGISLVDMYAKCGNIEDAYILFKQMDM--RNTVLWNAMLVGLAQHGNGEETLKLFEDMKA 687
V L+ +YAKC + A +F+ + + R V W A++ AQ+G E L++F M+
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 688 HGVEPDSVTFIGVLSA 703
V+PD V + VL+A
Sbjct: 216 MDVKPDWVALVSVLNA 231
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 36/314 (11%)
Query: 59 ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD--KMPD 116
+L+ S L +G+ HA++ D F+ N L+ +Y++C L AR +F+ +P+
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
R ++SW +I++AYA +GE E +F +R+ + L +L +
Sbjct: 185 RTIVSWTAIVSAYAQNGEP-----MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
++H +K+GL + + +L +Y+K G++ AK LFD M+ +++LW M+ YA
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 237 ENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK----------------RHEEQ 280
+NG+ E +F ++ + PD S+ + + +G R +
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 281 VQAYAIKL-----------LLYNN--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSN 327
+ + I + L+++ + +VV+W+ + GY G AI + M R
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 328 VQYDSVTFLVALAA 341
V + VTFL L A
Sbjct: 420 VHPNDVTFLGLLMA 433
Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L DL G+S HA ++ + L +L TMY++CG + A+ LFDKM
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
+LI WN++++ YA +G E +F + +++ + C G +
Sbjct: 287 NLILWNAMISGYAKNGYAR-----EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +++ Y + D F+S AL+++++K G + A+ +FD +RDVV+W M+ Y
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 238 NGFGEEVFHLFVDLHRSGLCPDD 260
+G E L+ + R G+ P+D
Sbjct: 402 HGRAREAISLYRAMERGGVHPND 424
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 340 bits (871), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 308/582 (52%), Gaps = 58/582 (9%)
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
GL D T + +++ S +H I H N F+ LI++Y + + +
Sbjct: 56 GLWADSATYSELIKCCIS-NRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
A LF+ ++ +W MI Y KALEL M R + T ++ +++C
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN- 173
Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
+ + +H +K G E D+ V S ++D++ K G DA S+F+++ D + W ++
Sbjct: 174 --GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
I G N D+AL ++ +M+ +G + ++ T +++A + L LE G Q H +++K D
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 290
Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
D + +LVDMY KCG++EDA +F QM R+ + W+ M+ GLAQ+G +E LKLFE
Sbjct: 291 -QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 685 MKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAG 744
MK+ G +P+ +T +GVL ACS+ GL+ + + F M++ YGI+P EHY ++D LG+AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 745 RTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSN 804
+ +A +L+ M E A R LLGACRVQ + ++ A+K++AL+P D+ Y LLSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 805 IFAAANQWDDVTSARGEMKRKNVKKDPA-------DLIFA----------------KVEG 841
I+A + +WD V R M+ + +KK+P I A K+
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 842 LIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNK---- 897
LI R+ GYVP+T+FVL D+E E+ E +L +HSEKLA A+GL++ P VI K
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRI 589
Query: 898 ----------------------EPLYANRFHHLRDGMCPCAD 917
+P+ R+HH +DG C C D
Sbjct: 590 CGDCHVFCKLASKLEIRSIVIRDPI---RYHHFQDGKCSCGD 628
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 172/388 (44%), Gaps = 48/388 (12%)
Query: 475 KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGIL 534
+A++ + + G D T + +K C + +G + + +G + + + ++
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 535 DMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEF 594
+MYVK + DA +F+ +P + ++WTTMIS AL + M V P+ +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 595 TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQM 654
T++ +++ SC + R +H +IK SD FV +L+D++AK G EDA +F +M
Sbjct: 164 TYSSVLR--SC-NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 655 DMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS--------- 705
+ ++WN+++ G AQ+ + L+LF+ MK G + T VL AC+
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 706 ------------------------YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
G + +A F+ M+E+ +V +S ++ L
Sbjct: 281 QAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-----DVITWSTMISGLA 335
Query: 742 RAGRTKEAGELILSMPFEASASMHRALLG---ACRVQGDTETGKWV---AEKLMALEPFD 795
+ G ++EA +L M + + ++G AC G E G + +KL ++P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV- 394
Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMK 823
Y + ++ A + DD EM+
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEME 422
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 199/493 (40%), Gaps = 96/493 (19%)
Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVS 197
++ + SL+ + T + L+K C+S+ V + + G F+
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99
Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
L+N+Y KF + +A LFD M +R+V+ W M+ AY++ ++ L V + R +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 258 PDDESVQCVL--------------GVISDLGKRHEEQVQAYAIKLL-----------LYN 292
P+ + VL G+I + G + V++ I + +++
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 293 N--NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
+ ++WN + G+ Q + A+E F M R+ + T L A G L L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 351 GQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLS 410
G Q H +K + +I+ N+L++MY C CG +L LR + + E
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMY----CKCG------SLEDALRVFNQMKER---- 322
Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
D+ TW+ MI G +
Sbjct: 323 ---------------------------------------------DVITWSTMISGLAQN 337
Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
S +AL+LF M +SG + + ITI + AC +L+ G + +MK + +D
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVRE 396
Query: 531 --SGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLS 587
++D+ K G + DA + N++ PD V W T++ C + ++ L+ Y ++
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC--RVQRNMVLAEYAAKKVI 454
Query: 588 GVVP-DEFTFAIL 599
+ P D T+ +L
Sbjct: 455 ALDPEDAGTYTLL 467
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 50/375 (13%)
Query: 18 VIFSSFTKDTY-RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTH 76
++ S FT+ Y R+LP ++ + LQ + S++ + +++ IS + G
Sbjct: 28 LLLSEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSAT--YSELIKCCISNRAVHEGNLIC 84
Query: 77 ARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
+ + P FL N L+ MY + L A +LFD+MP R++ISW ++++AY+
Sbjct: 85 RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC--KI 142
Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
+ E L LR+++ + T + +L+ C V +H +K GL D FV
Sbjct: 143 HQKALELLVLM--LRDNVR-PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFV 196
Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
AL+++++K G+ +A +FD M D ++W ++ +A+N + LF + R+G
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 257 CPDDESVQCVLGVIS-----DLGKRHEEQVQAYAIKLLLYN------------------- 292
+ ++ VL + +LG + + Y L+L N
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 293 ---NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN 349
+V+ W+ +SG Q G + A++ F M S + + +T + L A +
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS------ 370
Query: 350 LGQQIHGTTLKSGFY 364
H L+ G+Y
Sbjct: 371 -----HAGLLEDGWY 380
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 336 bits (861), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 224/760 (29%), Positives = 365/760 (48%), Gaps = 83/760 (10%)
Query: 156 FTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKF 215
+TS T LLK C + + +T+HG + +G +D F++ +LVN+Y K G + A
Sbjct: 57 WTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQ 116
Query: 216 LFDGMQE-------RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLG 268
+FDG + RDV +W M+ Y + +E F + G+ PD S+ V+
Sbjct: 117 VFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVS 176
Query: 269 VISDLGK-RHEE--QVQAYAIK-----------------------------LLLYNNNSN 296
V+ G R EE Q+ + ++ + + SN
Sbjct: 177 VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSN 236
Query: 297 VVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHG 356
VVLWN + G+ G +++ ++ ++V+ S +F AL A + ++N G+QIH
Sbjct: 237 VVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296
Query: 357 TTLKSGFYSAVIVGNSLINMYSKMG----------CVCGLRTDQFT-------------- 392
+K G ++ V SL++MYSK G CV R + +
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 393 ---LASVLRASSSLPEGLHLS---------------KQIHVHAIKNDTVADSFVSTALID 434
L +R S LP+ LS K +H K + S + +AL+
Sbjct: 357 ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416
Query: 435 VYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL--DE 492
+Y + G +A +F++ + D+ W ++I G + +AL++F M + L D
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 493 ITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFND 552
+ + AC L L+ G Q+H +K+G L++ V S ++D+Y KCG A +F
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 553 IPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQG 612
+ + VAW +MIS N +L++ +++ M G+ PD + ++ A S +L +G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
+ +H ++L SD + +L+DMY KCG + A +FK+M ++ + WN M+ G H
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
G+ L LF++MK G PD VTF+ ++SAC+++G V E F M++ YGIEP +EH
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
Y+ +VD LGRAG +EA I +MP EA +S+ LL A R + E G AEKL+ +E
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776
Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
P S YV L N++ A ++ G MK K + K P
Sbjct: 777 PERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPG 816
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 190/779 (24%), Positives = 337/779 (43%), Gaps = 105/779 (13%)
Query: 41 FLQKSHFSSSSSSSQWF--------SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTN 92
+LQ H S S F S+L+ + ++L GK+ H ++ D F+
Sbjct: 40 YLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIAT 99
Query: 93 NLMTMYSRCGSLVYARRLFD-------KMPDRDLISWNSILAAYAHSGEGNAENVTEGFR 145
+L+ MY +CG L YA ++FD + RD+ WNS++ Y EG
Sbjct: 100 SLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF-----KFRRFKEGVG 154
Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE--TVHGYALKIGLVWDEFVSGALVNI 203
FR + +L+ ++ + G E +HG+ L+ L D F+ AL+++
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 204 YSKFGKIREAKFLFDGMQER-DVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDES 262
Y KFG +A +F ++++ +VVLW VM+ + +G E L++ + + S
Sbjct: 215 YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 263 VQCVLGVISDL-GKRHEEQVQAYAIKLLLYNN---------------------------- 293
LG S Q+ +K+ L+N+
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 294 NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQ 353
+ + +WN ++ Y + + A++ F M + +V DS T ++ + N G+
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 354 IHGTTLKSGFYSAVIVGNSLINMYSKMGC-------------------------VC---- 384
+H K S + ++L+ +YSK GC +C
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 385 ----------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFV 428
L+ D + SV A + L E L Q+H IK V + FV
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL-EALRFGLQVHGSMIKTGLVLNVFV 513
Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
++LID+Y + G A +F + ++ WN+MI Y +N +++LF+ M + G
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI 573
Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
D ++I + + A L +GK +H Y ++ G D + + ++DMYVKCG A++
Sbjct: 574 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
IF + + W MI G +G+ ALS++ +M+ +G PD+ TF L+ A +
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693
Query: 609 LEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAM 665
+E+G+ I +K D +P + ++VD+ + G +E+AY K M + ++ +W +
Sbjct: 694 VEEGKNIF-EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCL 752
Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMREK 723
L H N E L + K +EP+ T++ +++ GL +EA + LM+EK
Sbjct: 753 LSASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 235/517 (45%), Gaps = 62/517 (11%)
Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSV-TFLVALAAVAGTDNLNLGQQIHGTTL 359
N + +Q G+ A+ + S+ + SV TF L A + NL+ G+ IHG+ +
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 360 KSGFYSAVIVGNSLINMYSK---------------------------------------- 379
G+ + SL+NMY K
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 380 -----MGC-----VCGLRTDQFTLASVLRASSSLPEG---LHLSKQIHVHAIKNDTVADS 426
+GC V G+R D F+L+ V+ S EG KQIH ++N DS
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVV--SVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 427 FVSTALIDVYCRNGSMAEAEYLF-ENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHT 485
F+ TALID+Y + G +A +F E +D ++ WN MI G+ S +L+L+
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
+ +L + A+ AC G+Q+H +K G D V + +L MY KCG + +
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSC 605
A+++F+ + W M++ +N AL ++ MR V+PD FT + ++ S
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 606 LTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAM 665
L G+ +HA L K S + +L+ +Y+KCG DAY++FK M+ ++ V W ++
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 666 LVGLAQHGNGEETLKLFEDMK--AHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMRE 722
+ GL ++G +E LK+F DMK ++PDS V +AC+ GL + + H
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA--GLEALRFGLQVHGSMI 503
Query: 723 KYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
K G+ V S L+D + G + A ++ SM E
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 184/370 (49%), Gaps = 17/370 (4%)
Query: 354 IHGTTLKSGFYSAVIVGNSL--INMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSK 411
I ++ SG + + G L +++YSK T FT S+L+A S+L L K
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTN-LSYGK 80
Query: 412 QIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLF----ENKDGF---DLATWNAMI 464
IH + D F++T+L+++Y + G + A +F +++ G D+ WN+MI
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 465 FGYILSNNSHKALELFSHMHTSGERLD--EITIATAVKACGCLLMLKQGKQMHAYAMKSG 522
GY + + F M G R D ++I +V ++GKQ+H + +++
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 523 FELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIY 581
+ D + + ++DMY K G +DA +F +I +V W MI G +G + +L +Y
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 582 HQMRLSGV--VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYA 639
+ + V V FT A+ + S + GRQIH +++K+ +DP+V SL+ MY+
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGF--GRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
KCG + +A +F + + +WNAM+ A++ G L LF M+ V PDS T
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 700 VLSACSYTGL 709
V+S CS GL
Sbjct: 379 VISCCSVLGL 388
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 30 NLPSFSLSLLPF-LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
NLP S+ L L + F S S + S+L ST+ LL GKS H L D
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSIT---SVLVAISSTASLLKGKSLHGYTLRLGIPSDT 612
Query: 89 FLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFR 148
L N L+ MY +CG YA +F KM + LI+WN ++ Y G+ LF
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGD-----CITALSLFD 667
Query: 149 SLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK-IGLVWDEFVSGALVNIYSKF 207
++++ +T L+ C SG+V + + + + G+ + +V++ +
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 208 GKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
G + EA M E D +W +L A
Sbjct: 728 GLLEEAYSFIKAMPIEADSSIWLCLLSA 755
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/703 (30%), Positives = 357/703 (50%), Gaps = 105/703 (14%)
Query: 309 QVGDNHGAIECFVNMIRSNVQYD--SVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS- 365
Q+ HG +MIR+ D S + L A+AA++ +L +++ K ++
Sbjct: 45 QLKQTHG------HMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 366 ------------AVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
V+ + ++M S+ C +++T +++A++ + L L + +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCY----PNKYTFPFLIKAAAEV-SSLSLGQSL 153
Query: 414 HVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNS 473
H A+K+ +D FV+ +LI Y G + A +F D+ +WN+MI G++ +
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 474 HKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGI 533
KALELF M + + +T+ + AC + L+ G+Q+ +Y ++ ++L +++ +
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 534 LDMYVKCGAMVDAQSIF-------------------------------NDIPAPDDVAWT 562
LDMY KCG++ DA+ +F N +P D VAW
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIK 621
+IS NG+ + AL ++H+++L + ++ T + A + + ALE GR IH+ + K
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 622 LDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKL 681
+ V +L+ MY+KCG++E + +F ++ R+ +W+AM+ GLA HG G E + +
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 682 FEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALG 741
F M+ V+P+ VTF V ACS+TGLV EA FH M YGI PE +HY+ +VD LG
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Query: 742 RAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVL 801
R+G ++A + I +MP S S+ ALLGAC++ + + +L+ LEP + A+VL
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 573
Query: 802 LSNIFAAANQWDDVTSARGEMKRKNVKKDP-----------------------ADLIFAK 838
LSNI+A +W++V+ R M+ +KK+P ++ ++ K
Sbjct: 574 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633
Query: 839 VEGLIKRIKEGGYVPDTDFVLLDVEEEE-KERALYYHSEKLARAYGLISTPPSSVI---- 893
+ +++++K GY P+ VL +EEEE KE++L HSEKLA YGLIST VI
Sbjct: 634 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 693
Query: 894 -----------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
L ++E + + RFHH R+G C C D
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/577 (22%), Positives = 251/577 (43%), Gaps = 44/577 (7%)
Query: 19 IFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHAR 78
IFS+ + P+FS P ++++ S+ S++ +S L K TH
Sbjct: 3 IFSTAQPLSLPRHPNFSNPNQP-------TTNNERSRHISLIERCVSLRQL---KQTHGH 52
Query: 79 ILNSSQIPDRFLTNNLMTM--YSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGN 136
++ + D + + L M S SL YAR++FD++P + +WN+++ AYA
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA----SG 108
Query: 137 AENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFV 196
+ V + + ES + ++ T L+K + +++HG A+K + D FV
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168
Query: 197 SGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGL 256
+ +L++ Y G + A +F ++E+DVV W M+ + + G ++ LF + +
Sbjct: 169 ANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 257 CPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNN-NSNVVLWNKKLSGYLQVGDNHG 315
S ++GV+S K + + N N N+ L N L Y + G
Sbjct: 229 ---KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 285
Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
A F M + D+VT+ L A +++ +++ L S ++ N+LI+
Sbjct: 286 AKRLFDAM----EEKDNVTWTTMLDGYAISEDYEAAREV----LNSMPQKDIVAWNALIS 337
Query: 376 MYSKMG-------------CVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
Y + G ++ +Q TL S L A + + L L + IH + K+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG-ALELGRWIHSYIKKHGI 396
Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
+ V++ALI +Y + G + ++ +F + + D+ W+AMI G + ++A+++F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCG 541
M + + + +T AC ++ + + + H G + + I+D+ + G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 542 AMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLA 577
+ A +P P + W ++ C + +LA
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYA--KCGNIEDAYILFKQMDMRNTVLWNA 664
+L Q +Q H ++I+ SDP+ L M A ++E A +F ++ N+ WN
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 665 MLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSA 703
++ A + ++ F DM + P+ TF ++ A
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 333 bits (854), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 207/640 (32%), Positives = 321/640 (50%), Gaps = 75/640 (11%)
Query: 325 RSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVC 384
R N+ ++ F + + +L G+Q+H + SGF S + N L++MYSK+G
Sbjct: 37 RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLG--- 93
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
S + + + ++S I LI+ Y R G +
Sbjct: 94 -------DFPSAVAVYGRMRKKNYMSSNI------------------LINGYVRAGDLVN 128
Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
A +F+ L TWNAMI G I + + L LF MH G DE T+ +
Sbjct: 129 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 188
Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
L + G+Q+H Y +K G ELDL V+S + MY++ G + D + + +P + VAW T+
Sbjct: 189 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 248
Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
I G NG + L +Y M++SG P++ TF ++ + S L QG+QIHA IK+
Sbjct: 249 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308
Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
SS V SL+ MY+KCG + DA F + + + V+W++M+ HG G+E ++LF
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368
Query: 685 MKAH-GVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRA 743
M +E + V F+ +L ACS++GL + E F +M EKYG +P ++HY+ +VD LGRA
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428
Query: 744 GRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLS 803
G +A +I SMP + + + LL AC + + E + V ++++ ++P DS+ YVLL+
Sbjct: 429 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 488
Query: 804 NIFAAANQWDDVTSARGEMKRKNVKKD-----------------------PADLIFAKVE 840
N+ A+A +W DV+ R M+ KNVKK+ + I++ ++
Sbjct: 489 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLK 548
Query: 841 GLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI------- 893
L +K GY PDT VL D++EEEKE L HSEKLA A+ L+ P + I
Sbjct: 549 ELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLR 608
Query: 894 --------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
+ N+E +RFHH +G C C D
Sbjct: 609 VCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 648
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 176/404 (43%), Gaps = 67/404 (16%)
Query: 42 LQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYS-- 99
Q+ + +++S + ++ + L GK H ++ S D+F+ N+LM+MYS
Sbjct: 33 FQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKL 92
Query: 100 -----------------------------RCGSLVYARRLFDKMPDRDLISWNSILAAYA 130
R G LV AR++FD+MPDR L +WN+++A
Sbjct: 93 GDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA--- 149
Query: 131 HSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
G E EG LFR + TL + V + +HGY +K GL
Sbjct: 150 --GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 207
Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
D V+ +L ++Y + GK+++ + + M R++V W ++ A+NG E V +L+
Sbjct: 208 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 267
Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHE-EQVQAYAIK-------------LLLYNN--- 293
+ SG P+ + VL SDL R + +Q+ A AIK + +Y+
Sbjct: 268 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 327
Query: 294 ------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALA 340
+ + V+W+ +S Y G AIE F M ++N++ + V FL L
Sbjct: 328 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 387
Query: 341 AVAGTDNLNLGQQIHGTTL-KSGFYSAVIVGNSLINMYSKMGCV 383
A + + + G ++ + K GF + ++++ + GC+
Sbjct: 388 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 431
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 333 bits (854), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 318/582 (54%), Gaps = 47/582 (8%)
Query: 296 NVVLWNKKLSGYLQVG---DNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
+VV WN ++GY Q G ++ ++ F M ++ ++ T A + + +G+
Sbjct: 79 DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138
Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCV-CGLRT-------DQFTLASVLRAS---- 400
Q H +K + + V SL+ MY K G V GL+ + +T ++++
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 401 ------------------------------SSLPEGLH--LSKQIHVHAIKNDTVADSFV 428
SSL ++ L +QIH IKN + +
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGE 488
S AL+ +Y + S+ EA +F++ + TW+AM+ GY + S +A++LFS M ++G
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 489 RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQS 548
+ E TI + AC + L++GKQ+H++ +K GFE L ++ ++DMY K G + DA+
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Query: 549 IFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA 608
F+ + D WT++ISG V N + + AL +Y +M+ +G++P++ T A ++KA S L
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 609 LEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVG 668
LE G+Q+H + IK + +G +L MY+KCG++ED ++F++ ++ V WNAM+ G
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 669 LAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEP 728
L+ +G G+E L+LFE+M A G+EPD VTF+ ++SACS+ G V + F++M ++ G++P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 729 EVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKL 788
+V+HY+ +VD L RAG+ KEA E I S + + R LL AC+ G E G + EKL
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
Query: 789 MALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKD 830
MAL +SS YV LS I+ A + DV M+ V K+
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 168/636 (26%), Positives = 290/636 (45%), Gaps = 88/636 (13%)
Query: 177 ASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYA 236
A VHG ++ G + LVN Y+K GK+ +A +F+ + +DVV W ++ Y+
Sbjct: 32 AGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYS 91
Query: 237 ENG---FGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAI------- 286
+NG V LF ++ + P+ ++ + S L + QA+A+
Sbjct: 92 QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL-QSSTVGRQAHALVVKMSSF 150
Query: 287 -----------------------KLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
K+ Y N W+ +SGY G AI+ F
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 324 IRSNVQ-YDS-VTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-- 379
+R + DS F L+++A T + LG+QIH T+K+G V + N+L+ MYSK
Sbjct: 211 LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCE 270
Query: 380 -MGCVC----------------------------------------GLRTDQFTLASVLR 398
+ C G++ ++T+ VL
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
A S + L KQ+H +K F +TAL+D+Y + G +A+A F+ D+A
Sbjct: 331 ACSDICY-LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVA 389
Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
W ++I GY+ ++++ +AL L+ M T+G ++ T+A+ +KAC L L+ GKQ+H +
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL 578
+K GF L++ + S + MY KCG++ D +F P D V+W MISG NG+ D AL
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 579 SIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR---QIHANLIKLDCSSDPFVGISLV 635
++ +M G+ PD+ TF ++ A S +E+G + ++ I LD D + +V
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA--CMV 567
Query: 636 DMYAKCGNIEDAYILFKQMDMRNTV-LWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDS 694
D+ ++ G +++A + ++ + + LW +L HG E + E + A G +S
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG-SRES 626
Query: 695 VTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEV 730
T++ + + G + + + MR G+ EV
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRAN-GVSKEV 661
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 266/633 (42%), Gaps = 85/633 (13%)
Query: 60 LRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDL 119
L H +L+ G++ H +I+ + N L+ Y++CG L A +F+ + +D+
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80
Query: 120 ISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASE 179
+SWNS++ Y+ +G G + + T +LFR +R + TLA + K S
Sbjct: 81 VSWNSLITGYSQNG-GISSSYTV-MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138
Query: 180 TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENG 239
H +K+ D +V +LV +Y K G + + +F M ER+ W M+ YA G
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 240 FGEE---VFHLFVDLHRSGLCPD------------------DESVQCVLGVISDLG--KR 276
EE VF+LF+ G D + C+ LG
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 277 HEEQVQAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
V Y A K+ + + N + W+ ++GY Q G++ A++ F M + +
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----- 383
+ T + L A + L G+Q+H LK GF + +L++MY+K GC+
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Query: 384 --------------------------------------CGLRTDQFTLASVLRASSSLPE 405
G+ + T+ASVL+A SSL
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
L L KQ+H H IK+ + + +AL +Y + GS+ + +F D+ +WNAMI
Sbjct: 439 -LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497
Query: 466 GYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
G + +ALELF M G D++T + AC +++G + M L
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGL 556
Query: 526 DLCVS--SGILDMYVKCGAMVDAQSIFNDIPAPDDVA-WTTMISGCVDNGEEDLALSIYH 582
D V + ++D+ + G + +A+ + W ++S C ++G+ +L +Y
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG--VYA 614
Query: 583 QMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
+L + E + V+ S TAL + R +
Sbjct: 615 GEKLMALGSRESS--TYVQLSGIYTALGRMRDV 645
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 160/322 (49%), Gaps = 8/322 (2%)
Query: 429 STALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS---NNSHKALELFSHMHT 485
+ L++ Y + G +A+A +F D+ +WN++I GY + ++S+ ++LF M
Sbjct: 52 ANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRA 111
Query: 486 SGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVD 545
+ T+A KA L G+Q HA +K D+ V + ++ MY K G + D
Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 546 AQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYH---QMRLSGVVPDEFTFAILVKA 602
+F +P + W+TM+SG G + A+ +++ + + G D + F ++ +
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSS 230
Query: 603 SSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLW 662
+ + GRQIH IK + +LV MY+KC ++ +A +F RN++ W
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 663 NAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMRE 722
+AM+ G +Q+G E +KLF M + G++P T +GVL+ACS + E + H
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLL 349
Query: 723 KYGIEPEVEHYSFLVDALGRAG 744
K G E + + LVD +AG
Sbjct: 350 KLGFERHLFATTALVDMYAKAG 371
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 152/323 (47%), Gaps = 34/323 (10%)
Query: 50 SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
S S + ++L +T + LG+ H + + + L+N L+TMYS+C SL A +
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277
Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
+FD DR+ I+W++++ Y+ +GE E +LF + + S T+ +L C
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGES-----LEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWK 229
Y+ + +H + LK+G F + ALV++Y+K G + +A+ FD +QERDV LW
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 230 VMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK- 287
++ Y +N EE L+ + +G+ P+D ++ VL S L +QV + IK
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 288 ---------------------------LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECF 320
+ N +VV WN +SG G A+E F
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 321 VNMIRSNVQYDSVTFLVALAAVA 343
M+ ++ D VTF+ ++A +
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACS 535
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 508 LKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISG 567
L G+ +H +++G + ++ +++ Y KCG + A SIFN I D V+W ++I+G
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 568 CVDNG---EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
NG + ++ +MR ++P+ +T A + KA S L + GRQ HA ++K+
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLK---L 681
D +V SLV MY K G +ED +F M RNT W+ M+ G A G EE +K L
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 682 FEDMKAHGVEPDSVTFIGVLS---ACSYTGL 709
F K G + D V F VLS A Y GL
Sbjct: 210 FLREKEEGSDSDYV-FTAVLSSLAATIYVGL 239
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 331 bits (848), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/662 (30%), Positives = 325/662 (49%), Gaps = 89/662 (13%)
Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT----------------- 388
D + +H +K G+ S VG +LIN YS G V RT
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 389 ----------DQFTLASVLRASSSLPE---------------GLHLSKQIHVHAIKNDTV 423
D L S +R + +P +K +H +K V
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 424 ADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHM 483
D V L+ +Y + G M++A +F D+ W+ MI + + ++A++LF M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 484 HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAM 543
+ +E T+++ + C G+Q+H +K GF+LD+ VS+ ++D+Y KC M
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 544 VDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKAS 603
A +F ++ + ++V+W T+I G + GE A S++ + + V E TF+ + A
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 604 SCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWN 663
+ L +++ G Q+H IK + + V SL+DMYAKCG+I+ A +F +M+ + WN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 664 AMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREK 723
A++ G + HG G + L++ + MK +P+ +TF+GVLS CS GL+ + E F M
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 724 YGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKW 783
+GIEP +EHY+ +V LGR+G+ +A +LI +P+E S + RA+L A Q + E +
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 784 VAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------- 832
AE+++ + P D + YVL+SN++A A QW +V S R MK VKK+P
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Query: 833 ------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLAR 880
LI +E L + GYVPD + VLLD+++EEK++ L+ HSE+LA
Sbjct: 700 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 759
Query: 881 AYGLISTPPS------------------------SVILSNKEPLYANRFHHLRDGMCPCA 916
AYGL+ P S S++ + NRFHH G+C C
Sbjct: 760 AYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCG 819
Query: 917 DN 918
D+
Sbjct: 820 DH 821
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 142/599 (23%), Positives = 251/599 (41%), Gaps = 84/599 (14%)
Query: 53 SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
S + ++LR I +D + K+ H IL D F TN L+ Y + G A LFD
Sbjct: 49 SHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
+MP+R+ +S+ ++ YA + L+ L + LKL +S
Sbjct: 109 EMPERNNVSFVTLAQGYA---------CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSL 159
Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
+H +K+G + FV AL+N YS G + A+ +F+G+ +D+V+W ++
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPD----DESVQCVLGVIS-DLGKRHEEQV------ 281
Y ENG+ E+ L + +G P+ D +++ +G+ + D K Q+
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 282 ----------QAY--------AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
Q Y A K+ ++VV W+ ++ + Q G + A++ F+ M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKM--- 380
+ V + T L A LG+Q+HG +K GF + V N+LI++Y+K
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 381 -------------------GCVCG---------------------LRTDQFTLASVLRAS 400
+ G + + T +S L A
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 401 SSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
+SL + L Q+H AIK + VS +LID+Y + G + A+ +F + D+A+W
Sbjct: 460 ASLAS-MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
NA+I GY +AL + M + + +T + C ++ QG++ ++
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 521 S-GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
G E L + ++ + + G + A + IP P + W M+S ++ E+ A
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFA 637
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 35 SLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNL 94
SL LL ++ + F ++ + + + L+ +I K H +IL + + D + L
Sbjct: 231 SLKLLSCMRMAGFMPNNYT--FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 95 MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
+ +Y++ G + A ++F++MP D++ W+ ++A + +G N E LF +RE+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN-----EAVDLFIRMREAF 343
Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
+ TL+ +L C E +HG +K+G D +VS AL+++Y+K K+ A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
LF + ++ V W ++ Y G G + F +F + R+ + + + LG + L
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 275 KRH-EEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNM 323
QV AIK NN V + N + Y + GD A F M
Sbjct: 464 SMDLGVQVHGLAIKT---NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 28 YRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPD 87
Y NL + F + S + + S L S + + LG H + ++
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 88 RFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
++N+L+ MY++CG + +A+ +F++M D+ SWN++++ Y+ G G + R+
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR-----QALRIL 538
Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK---IGLVWDEFVSGALVNIY 204
+++ + LT +L C ++G + + ++ I + + +V +
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT--CMVRLL 596
Query: 205 SKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
+ G++ +A L +G+ E V++W+ ML A
Sbjct: 597 GRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/648 (30%), Positives = 336/648 (51%), Gaps = 69/648 (10%)
Query: 316 AIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLIN 375
A+ FV M S D F L + +L G+ +HG ++ G + GN+L+N
Sbjct: 89 ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148
Query: 376 MYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDV 435
MY+K+ G+ + SV +P+ S D A++ + ID
Sbjct: 149 MYAKL---LGMGSK----ISVGNVFDEMPQRTSNSGD-------EDVKAETCIMPFGIDS 194
Query: 436 YCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
R +FE D+ ++N +I GY S AL + M T+ + D T+
Sbjct: 195 VRR---------VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
++ + + + +GK++H Y ++ G + D+ + S ++DMY K + D++ +F+ +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 556 PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQI 615
D ++W ++++G V NG + AL ++ QM + V P F+ ++ A + L L G+Q+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 616 HANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNG 675
H +++ S+ F+ +LVDMY+KCGNI+ A +F +M++ + V W A+++G A HG+G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 676 EETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSF 735
E + LFE+MK GV+P+ V F+ VL+ACS+ GLV EA+ F+ M + YG+ E+EHY+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFD 795
+ D LGRAG+ +EA I M E + S+ LL +C V + E + VAEK+ ++ +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 796 SSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------------------- 832
AYVL+ N++A+ +W ++ R M++K ++K PA
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 833 DLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSV 892
D I ++ +++++++ GYV DT VL DV+EE K L+ HSE+LA A+G+I+T P +
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665
Query: 893 I---------------------LSNKEPLYAN--RFHHLRDGMCPCAD 917
I ++ +E + + RFHH G C C D
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGD 713
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 38/383 (9%)
Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
+KQ+H I+ +++ + S +I +Y + EA LF+ + W ++I +
Sbjct: 24 AKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
+ KAL F M SG D + +K+C ++ L+ G+ +H + ++ G + DL
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 530 SSGILDMYVKC---GAMVDAQSIFNDIPA------------------------------- 555
+ +++MY K G+ + ++F+++P
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 556 --PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGR 613
D V++ T+I+G +G + AL + +M + + PD FT + ++ S + +G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
+IH +I+ SD ++G SLVDMYAK IED+ +F ++ R+ + WN+++ G Q+G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
E L+LF M V+P +V F V+ AC++ + + H + G +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIA 381
Query: 734 SFLVDALGRAGRTKEAGELILSM 756
S LVD + G K A ++ M
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRM 404
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 68 DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
D++ GK H ++ D ++ ++L+ MY++ + + R+F ++ RD ISWNS++A
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
Y +G N E RLFR + + + + ++ C + + +HGY L+
Sbjct: 317 GYVQNGRYN-----EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
G + F++ ALV++YSK G I+ A+ +FD M D V W ++ +A +G G E L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
F ++ R G+ P+ + VL S +G E A+ +N+ + V N++L Y
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDE----AWG----YFNSMTKVYGLNQELEHY 483
Query: 308 LQVGD---NHGAIECFVNMI-RSNVQYDSVTFLVALAAVAGTDNLNLGQQI 354
V D G +E N I + V+ + L++ + NL L +++
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 152/375 (40%), Gaps = 70/375 (18%)
Query: 34 FSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNN 93
FS +L F++ + + S+L+ DL G+S H I+ D + N
Sbjct: 86 FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 94 LMTMYSRC---GSLVYA---------------------------------RRLFDKMPDR 117
LM MY++ GS + RR+F+ MP +
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
D++S+N+I+A YA SG + R+ R + + TL+ +L + V
Sbjct: 206 DVVSYNTIIAGYAQSGM-----YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +HGY ++ G+ D ++ +LV++Y+K +I +++ +F + RD + W ++ Y +
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 238 NGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRH-EEQVQAYAIK--------- 287
NG E LF + + + P + V+ + L H +Q+ Y ++
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 288 ----LLLYNNNSNV---------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
+ +Y+ N+ V W + G+ G H A+ F M R V
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 329 QYDSVTFLVALAAVA 343
+ + V F+ L A +
Sbjct: 441 KPNQVAFVAVLTACS 455
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 171/404 (42%), Gaps = 73/404 (18%)
Query: 50 SSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARR 109
SSS + +++++ K HA+ + + + + ++++Y+ L A
Sbjct: 2 SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLLHEALL 60
Query: 110 LFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLC 169
LF + +++W S++ + + ++ F +R S +LK C
Sbjct: 61 LFKTLKSPPVLAWKSVIRCFT-----DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSC 115
Query: 170 LSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSK----------------------- 206
+ E+VHG+ +++G+ D + AL+N+Y+K
Sbjct: 116 TMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSN 175
Query: 207 --------------FGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
FG I + +F+ M +DVV + ++ YA++G E+ + ++
Sbjct: 176 SGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 253 RSGLCPDDESVQCVLGVISD-LGKRHEEQVQAYAIK-------------LLLYNNNSNV- 297
+ L PD ++ VL + S+ + +++ Y I+ + +Y ++ +
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 298 --------------VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
+ WN ++GY+Q G + A+ F M+ + V+ +V F + A A
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA 354
Query: 344 GTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLR 387
L+LG+Q+HG L+ GF S + + ++L++MYSK G + R
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 40/292 (13%)
Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
I T +K + Q KQ+HA +++ L +S ++ +Y + +A +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 555 APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQ 614
+P +AW ++I D AL+ + +MR SG PD F ++K+ + + L G
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 615 IHANLIKLDCSSDPFVGISLVDMYAK---------CGN---------------------- 643
+H +++L D + G +L++MYAK GN
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 644 -----IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFI 698
I+ +F+ M ++ V +N ++ G AQ G E+ L++ +M ++PDS T
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 699 GVLSACS-YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEA 749
VL S Y ++ + +++R+ GI+ +V S LVD ++ R +++
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDS 296
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 329 bits (844), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 197/581 (33%), Positives = 291/581 (50%), Gaps = 49/581 (8%)
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
G+ + FT +A +SL + KQIH A+K + D FV + D+YC+ +
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPV-TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
A LF+ +L TWNA I + +A+E F + IT + AC
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 505 LLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTM 564
L L G Q+H ++SGF+ D+ V +G++D Y KC + ++ IF ++ + V+W ++
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 565 ISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
++ V N E++ A +Y + R V +F + ++ A + + LE GR IHA+ +K
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
FVG +LVDMY KCG IED+ F +M +N V N+++ G A G + L LFE+
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 685 MKAHGV--EPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGR 742
M G P+ +TF+ +LSACS G V + F MR YGIEP EHYS +VD LGR
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 743 AGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLL 802
AG + A E I MP + + S+ AL ACR+ G + G AE L L+P DS +VLL
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521
Query: 803 SNIFAAANQWDDVTSARGEMKRKNVK-------------------KDPADLIFAKVEGLI 843
SN FAAA +W + + R E+K +K KD + ++ +++ +
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581
Query: 844 KRIKE----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKEP 899
+++ GY PD L D+EEEEK + +HSEKLA A+GL+S P S I K
Sbjct: 582 AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 641
Query: 900 LYA-----------------------NRFHHLRDGMCPCAD 917
NRFH +DG+C C D
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 181/409 (44%), Gaps = 9/409 (2%)
Query: 407 LHLSKQIHVHAIKN-DTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIF 465
+ L + +H +K D+ F++ LI++Y + A + ++ +W ++I
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 466 GYILSNNSH--KALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
G L+ N H AL F M G ++ T A KA L + GKQ+HA A+K G
Sbjct: 82 G--LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
LD+ V DMY K DA+ +F++IP + W IS V +G A+ + +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
R P+ TF + A S L G Q+H +++ +D V L+D Y KC
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
I + I+F +M +N V W +++ Q+ E+ L+ + VE VLSA
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319
Query: 704 CS-YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASA 762
C+ GL E + H K +E + S LVD G+ G +++ + MP E +
Sbjct: 320 CAGMAGL--ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNL 376
Query: 763 SMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQ 811
+L+G QG + + E++ + Y+ ++ +A ++
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 41/358 (11%)
Query: 59 ILRHAISTSDLLLGKSTHARILNS-SQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
+L++AIS S + LG+ HARI+ + P FL N L+ MYS+ AR + P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
+++SW S+++ A +G + V F +R + T K S
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVE-----FFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +H A+K G + D FV + ++Y K +A+ LFD + ER++ W +
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 238 NGFGEEVFHLFVDLHRS-------------GLCPD-------------------DESVQC 265
+G E F++ R C D D V
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
G+I GK +Q+++ I + N V W ++ Y+Q ++ A ++ +
Sbjct: 247 CNGLIDFYGKC--KQIRSSEI-IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV 383
V+ L+A AG L LG+ IH +K+ + VG++L++MY K GC+
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 69 LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
L LG H +L S D + N L+ Y +C + + +F +M ++ +SW S++AA
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 129 YAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKI 188
Y + E +V L+ R+ I TS ++ +L C + ++H +A+K
Sbjct: 285 YVQNHEDEKASV-----LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 189 GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLF 248
+ FV ALV++Y K G I +++ FD M E+++V ++ YA G + LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 249 VDLHRSGLCP 258
++ G P
Sbjct: 400 EEMAPRGCGP 409
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+L + L LG+S HA + + F+ + L+ MY +CG + + + FD+MP++
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSL--RESITFTSRLTLAPLLKLCLSSGYV 175
+L++ NS++ YAH G+ V LF + R + +T LL C +G V
Sbjct: 375 NLVTRNSLIGGYAHQGQ-----VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 328 bits (841), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 303/558 (54%), Gaps = 54/558 (9%)
Query: 411 KQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILS 470
+++H H IK + +++ T L+ Y + + +A + + ++ +W AMI Y +
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 471 NNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS 530
+S +AL +F+ M S + +E T AT + +C L GKQ+H +K ++ + V
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 531 SGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVV 590
S +LDMY K G + +A+ IF +P D V+ T +I+G G ++ AL ++H++ G+
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 591 PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI---SLVDMYAKCGNIEDA 647
P+ T+A L+ A S L L+ G+Q H ++++ + PF + SL+DMY+KCGN+ A
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRREL---PFYAVLQNSLIDMYSKCGNLSYA 308
Query: 648 YILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHG-VEPDSVTFIGVLSACSY 706
LF M R + WNAMLVG ++HG G E L+LF M+ V+PD+VT + VLS CS+
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 707 TGLVSEAYENFH-LMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
+ F ++ +YG +P EHY +VD LGRAGR EA E I MP + +A +
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
+LLGACRV + G+ V +L+ +EP ++ YV+LSN++A+A +W DV + R M +K
Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQK 488
Query: 826 NVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLDV 862
V K+P + + AK++ + ++K+ GYVPD VL DV
Sbjct: 489 AVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV 548
Query: 863 EEEEKERALYYHSEKLARAYGLISTPPSSVI-----------LSNKEPLYA--------- 902
+EE+KE+ L HSEKLA +GLI+T I N +++
Sbjct: 549 DEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSL 608
Query: 903 ---NRFHHLRDGMCPCAD 917
NRFH + DG+C C D
Sbjct: 609 RDKNRFHQIVDGICSCGD 626
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 152/275 (55%), Gaps = 7/275 (2%)
Query: 499 VKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDD 558
+ AC L+ G+++HA+ +K+ + + + +L Y KC + DA+ + +++P +
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 559 VAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTA--LEQGRQIH 616
V+WT MIS G AL+++ +M S P+EFTFA ++ +SC+ A L G+QIH
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVL--TSCIRASGLGLGKQIH 176
Query: 617 ANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGE 676
++K + S FVG SL+DMYAK G I++A +F+ + R+ V A++ G AQ G E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 677 ETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYE-NFHLMREKYGIEPEVEHYSF 735
E L++F + + G+ P+ VT+ +L+A S L+ + + H++R + +++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS-- 294
Query: 736 LVDALGRAGRTKEAGELILSMPFEASASMHRALLG 770
L+D + G A L +MP + S + L+G
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 329
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 387 RTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAE 446
+ ++FT A+VL S GL L KQIH +K + + FV ++L+D+Y + G + EA
Sbjct: 150 KPNEFTFATVL-TSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208
Query: 447 YLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLL 506
+FE D+ + A+I GY +ALE+F +H+ G + +T A+ + A L
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA 268
Query: 507 MLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMIS 566
+L GKQ H + ++ + + ++DMY KCG + A+ +F+++P ++W M+
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 567 GCVDNGEEDLALSIYHQMR-LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCS 625
G +G L ++ MR V PD T ++ S + G I ++ +
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG 388
Query: 626 SDPFVGI--SLVDMYAKCGNIEDAYILFKQMDMRNT 659
+ P +VDM + G I++A+ K+M + T
Sbjct: 389 TKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 35/302 (11%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
G+ HA ++ + +P +L L+ Y +C L AR++ D+MP+++++SW ++++ Y+
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
+G +E +F + S + T A +L C+ + + + +HG +K
Sbjct: 131 TGHS-----SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
FV +L+++Y+K G+I+EA+ +F+ + ERDVV ++ YA+ G EE +F L
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 252 HRSGLCPDDESVQCVLGVISDLG-KRHEEQVQAYAIK-------------LLLYNNNSNV 297
H G+ P+ + +L +S L H +Q + ++ + +Y+ N+
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 298 ---------------VLWNKKLSGYLQVGDNHGAIECFVNMI-RSNVQYDSVTFLVALAA 341
+ WN L GY + G +E F M V+ D+VT L L+
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 342 VA 343
+
Sbjct: 366 CS 367
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 142/345 (41%), Gaps = 61/345 (17%)
Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
A K+L NVV W +S Y Q G + A+ F M+RS+ + + TF L +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------C------------ 384
L LG+QIHG +K + S + VG+SL++MY+K G + C
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 385 -----------------------GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKND 421
G+ + T AS+L A S L H KQ H H ++ +
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH-GKQAHCHVLRRE 284
Query: 422 TVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFS 481
+ + +LID+Y + G+++ A LF+N +WNAM+ GY + LELF
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 482 HMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMH------AYAMKSGFELDLCVSSGIL 534
M + D +T+ + C M G + Y K G E C I+
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC----IV 400
Query: 535 DMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGC-----VDNGE 573
DM + G + +A +P+ P +++ C VD GE
Sbjct: 401 DMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
++L I S L LGK H I+ + F+ ++L+ MY++ G + AR +F+ +P+R
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
D++S +I+A YA G E +F L + +T A LL +
Sbjct: 218 DVVSCTAIIAGYAQLGLDE-----EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 178 SETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ H + L+ L + + +L+++YSK G + A+ LFD M ER + W ML Y++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 238 NGFGEEVFHLF 248
+G G EV LF
Sbjct: 333 HGLGREVLELF 343
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 327 bits (837), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 236/799 (29%), Positives = 377/799 (47%), Gaps = 131/799 (16%)
Query: 243 EVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNS--NVVLW 300
++FH L + GL D ++ ++ +LG R + ++A K + N+ S ++
Sbjct: 49 KMFHR--SLTKQGLDNDVSTITKLVARSCELGTR---ESLSFA-KEVFENSESYGTCFMY 102
Query: 301 NKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLK 360
N + GY G + AI F+ M+ S + D TF L+A A + G QIHG +K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 361 SGFYSAVIVGNSLINMYSKMG----------------------CVCGLRTDQF------- 391
G+ + V NSL++ Y++ G +CG F
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 392 ---------------TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
T+ V+ A + L E L ++++ + + + +AL+D+Y
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKL-EDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
+ ++ A+ LF+ +L NAM Y+ + +AL +F+ M SG R D I++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
+A+ +C L + GK H Y +++GFE + + ++DMY+KC A IF+ +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 557 DDVAWTTMISGCVDNGEEDLALSIYHQMR----------LSGVV---------------- 590
V W ++++G V+NGE D A + M +SG+V
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 591 ------PDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
D T + A L AL+ + I+ + K D +G +LVDM+++CG+
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
E A +F + R+ W A + +A GN E ++LF+DM G++PD V F+G L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
S+ GLV + E F+ M + +G+ PE HY +VD LGRAG +EA +LI MP E + +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
+LL ACRVQG+ E + AEK+ L P + +YVLLSN++A+A +W+D+ R MK
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 825 KNVKKDPADL-----------------------IFAKVEGLIKRIKEGGYVPDTDFVLLD 861
K ++K P I A ++ + +R G+VPD VL+D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761
Query: 862 VEEEEKERALYYHSEKLARAYGLISTPPSSVI---------------------LSNKEPL 900
V+E+EK L HSEKLA AYGLIS+ + I + N+E +
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821
Query: 901 YA--NRFHHLRDGMCPCAD 917
NRFH++R G C C D
Sbjct: 822 LRDNNRFHYIRQGKCSCGD 840
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 230/537 (42%), Gaps = 62/537 (11%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
G H I+ D F+ N+L+ Y+ CG L AR++FD+M +R+++SW S++ YA
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 132 SGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLV 191
A++ + F FR +R+ + +T+ ++ C + E V+ + G+
Sbjct: 213 --RDFAKDAVDLF--FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 192 WDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDL 251
++ + ALV++Y K I AK LFD ++ L M Y G E +F +
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 252 HRSGLCPDDESVQCVLGVISDL-----GKRHEEQV------------------------Q 282
SG+ PD S+ + S L GK V Q
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 283 AYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAV 342
A ++ +N VV WN ++GY++ G+ A E F M N+
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI-------------- 434
Query: 343 AGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSS 402
+ T+ SG + + I ++ M G+ D T+ S+ A
Sbjct: 435 -----------VSWNTIISGLVQGSLFEEA-IEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 403 LPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNA 462
L L L+K I+ + KN D + T L+D++ R G A +F + D++ W A
Sbjct: 483 LG-ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 463 MIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-S 521
I ++ N+ +A+ELF M G + D + A+ AC +++QGK++ +K
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
G + ++D+ + G + +A + D+P P+DV W ++++ C G ++A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 49/316 (15%)
Query: 68 DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
DL G+ +A I NS + + + L+ MY +C ++ A+RLFD+ +L N++ +
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 128 AYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
Y G E +F + +S R+++ + C + ++ HGY L+
Sbjct: 311 NYVRQGL-----TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 188 IGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFH 246
G WD + AL+++Y K + A +FD M + VV W ++ Y ENG + +
Sbjct: 366 NGFESWDN-ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 247 LFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSG 306
F + P+ N+V WN +SG
Sbjct: 425 TFETM------PE-----------------------------------KNIVSWNTIISG 443
Query: 307 YLQVGDNHGAIECFVNM-IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYS 365
+Q AIE F +M + V D VT + +A L+L + I+ K+G
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 366 AVIVGNSLINMYSKMG 381
V +G +L++M+S+ G
Sbjct: 504 DVRLGTTLVDMFSRCG 519
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 68 DLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILA 127
++L GKS H +L + + N L+ MY +C A R+FD+M ++ +++WNSI+A
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 128 AYAHSGEGNA----------ENVT----------------EGFRLFRSLRESITFTSR-L 160
Y +GE +A +N+ E +F S++ + +
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
T+ + C G + ++ ++ Y K G+ D + LV+++S+ G A +F+ +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPD 259
RDV W + A A G E LF D+ GL PD
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 306/620 (49%), Gaps = 87/620 (14%)
Query: 380 MGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRN 439
+ C L + + S L+ S E KQIH +K + DS+ T + +C +
Sbjct: 4 ISCSFSLEHNLYETMSCLQRCSKQEE----LKQIHARMLKTGLMQDSYAITKFLS-FCIS 58
Query: 440 GSMAE----AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITI 495
+ ++ A+ +F+ D D WN MI G+ S+ ++L L+ M S + T
Sbjct: 59 STSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTF 118
Query: 496 ATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA 555
+ +KAC L ++ Q+HA K G+E D+ + +++ Y G A +F+ IP
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 556 PDDVAWTTMISGCVDNGEEDLALSIY-------------------------------HQM 584
PDDV+W ++I G V G+ D+AL+++ H+M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 585 RLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI 644
+ S V PD + A + A + L ALEQG+ IH+ L K D +G L+DMYAKCG +
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEM 298
Query: 645 EDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSAC 704
E+A +FK + ++ W A++ G A HG+G E + F +M+ G++P+ +TF VL+AC
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 705 SYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASM 764
SYTGLV E F+ M Y ++P +EHY +VD LGRAG EA I MP + +A +
Sbjct: 359 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Query: 765 HRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKR 824
ALL ACR+ + E G+ + E L+A++P+ YV +NI A +WD R MK
Sbjct: 419 WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 478
Query: 825 KNVKKDPA-----------------------DLIFAKVEGLIKRIKEGGYVPDTDFVLLD 861
+ V K P + I +K + ++++E GYVP+ + +LLD
Sbjct: 479 QGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLD 538
Query: 862 -VEEEEKERALYYHSEKLARAYGLISTPPSSVILSNKE---------------PLYA--- 902
V+++E+E ++ HSEKLA YGLI T P ++I K +Y
Sbjct: 539 LVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDI 598
Query: 903 -----NRFHHLRDGMCPCAD 917
RFHH RDG C C D
Sbjct: 599 VMRDRTRFHHFRDGKCSCGD 618
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 183/391 (46%), Gaps = 35/391 (8%)
Query: 293 NNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
+ + LWN + G+ + ++ + M+ S+ +++ TF L A +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 353 QIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQ 412
QIH K G+ + V NSLIN Y+ G F LA +L +PE
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTG--------NFKLAHLL--FDRIPE------- 178
Query: 413 IHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNN 472
D ++I Y + G M A LF + +W MI GY+ ++
Sbjct: 179 -----------PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADM 227
Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSG 532
+ +AL+LF M S D +++A A+ AC L L+QGK +H+Y K+ +D +
Sbjct: 228 NKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV 287
Query: 533 ILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPD 592
++DMY KCG M +A +F +I AWT +ISG +G A+S + +M+ G+ P+
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 593 EFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI--SLVDMYAKCGNIEDAYIL 650
TF ++ A S +E+G+ I ++ + D + P + +VD+ + G +++A
Sbjct: 348 VITFTAVLTACSYTGLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 651 FKQMDMR-NTVLWNAMLVGLAQHGN---GEE 677
++M ++ N V+W A+L H N GEE
Sbjct: 407 IQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/528 (21%), Positives = 196/528 (37%), Gaps = 121/528 (22%)
Query: 73 KSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDKMPDRDLISWNSILAAY 129
K HAR+L + + D + ++ S L YA+ +FD D WN ++ +
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 130 AHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIG 189
+ S E L++ + S + T LLK C + + +H K+G
Sbjct: 91 SCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 190 LVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFV 249
D + +L+N Y+ G + A LFD + E D V W +++ Y + G + LF
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 250 DLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQ 309
+ N + W +SGY+Q
Sbjct: 206 KM-----------------------------------------AEKNAISWTTMISGYVQ 224
Query: 310 VGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIV 369
N A++ F M S+V+ D+V+ AL+A A L G+ IH K+ ++
Sbjct: 225 ADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVL 284
Query: 370 GNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS 429
G LI+MY+K G + E L + K I +++
Sbjct: 285 GCVLIDMYAKCG--------------------EMEEALEVFKNIKKKSVQ---------- 314
Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGER 489
W A+I GY + +A+ F M G +
Sbjct: 315 -----------------------------AWTALISGYAYHGHGREAISKFMEMQKMGIK 345
Query: 490 LDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVS--SGILDMYVKCGAMVDAQ 547
+ IT + AC ++++GK + Y+M+ + L + I+D+ + G + +A+
Sbjct: 346 PNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Query: 548 SIFNDIP-APDDVAWTTMISGC-----VDNGEED----LALSIYHQMR 585
++P P+ V W ++ C ++ GEE +A+ YH R
Sbjct: 405 RFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGR 452
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 26/277 (9%)
Query: 37 SLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMT 96
SLL + + S+ ++ + S+L+ + S HA+I D + N+L+
Sbjct: 99 SLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLIN 158
Query: 97 MYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSG-------------EGNAENVT-- 141
Y+ G+ A LFD++P+ D +SWNS++ Y +G E NA + T
Sbjct: 159 SYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTM 218
Query: 142 -----------EGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGL 190
E +LF ++ S ++LA L C G + + +H Y K +
Sbjct: 219 ISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI 278
Query: 191 VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
D + L+++Y+K G++ EA +F ++++ V W ++ YA +G G E F++
Sbjct: 279 RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFME 338
Query: 251 LHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
+ + G+ P+ + VL S G E ++ Y+++
Sbjct: 339 MQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 322 bits (826), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 297/573 (51%), Gaps = 51/573 (8%)
Query: 393 LASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENK 452
L+ +LRASSS P+ L K+IH ++ + + T L++ G M A +F+
Sbjct: 13 LSELLRASSSKPKQL---KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM 69
Query: 453 DGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGK 512
+ WN + GY+ + ++L L+ M G R DE T VKA L G
Sbjct: 70 HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF 129
Query: 513 QMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNG 572
+HA+ +K GF V++ ++ MY+K G + A+ +F + D VAW ++ CV G
Sbjct: 130 ALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG 189
Query: 573 EEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGI 632
+AL +++M V D FT ++ A L +LE G +I+ K + + V
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 633 SLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEP 692
+ +DM+ KCGN E A +LF++M RN V W+ M+VG A +G+ E L LF M+ G+ P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 693 DSVTFIGVLSACSYTGLVSEAYENFHLMREK--YGIEPEVEHYSFLVDALGRAGRTKEAG 750
+ VTF+GVLSACS+ GLV+E F LM + +EP EHY+ +VD LGR+G +EA
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369
Query: 751 ELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAAN 810
E I MP E + ALLGAC V D G+ VA+ L+ P S +VLLSNI+AAA
Sbjct: 370 EFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAG 429
Query: 811 QWDDVTSARGEMKRKNVKKDPA-----------------------DLIFAKVEGLIKRIK 847
+WD V R +M++ KK A I+ K++ ++K+I+
Sbjct: 430 KWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
Query: 848 EGGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTPPSSVI-------------- 893
+ GYVPDT V DVE EEKE +L +HSEKLA A+GLI P I
Sbjct: 490 KMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHA 549
Query: 894 -------LSNKEPLY--ANRFHHLRDGMCPCAD 917
L++ E + NRFHH R+G+C C +
Sbjct: 550 FSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKE 582
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 169/391 (43%), Gaps = 22/391 (5%)
Query: 13 HKHTYVIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLG 72
HK ++++ K RN F SLL + + + +++ D G
Sbjct: 70 HKPRIFLWNTLFKGYVRNQLPFE-SLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG 128
Query: 73 KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
+ HA ++ + L+ MY + G L A LF+ M +DL++WN+ LA +
Sbjct: 129 FALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188
Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
G N+ E F + +++ F S T+ +L C G + E ++ A K +
Sbjct: 189 G--NSAIALEYFN--KMCADAVQFDS-FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
+ V A ++++ K G A+ LF+ M++R+VV W M+ YA NG E LF +
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
GL P+ + VL S G +E + L++ +N+ N+ + + + +
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGK---RYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 313 NHGAIECFVNMIRS-NVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS----GFYSAV 367
G +E I+ V+ D+ + L A A ++ LGQ++ +++ G Y +
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420
Query: 368 IVGNSLINMYSKMG---CVCGLRTDQFTLAS 395
L N+Y+ G CV +R+ L +
Sbjct: 421 -----LSNIYAAAGKWDCVDKVRSKMRKLGT 446
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 35/338 (10%)
Query: 53 SSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFD 112
+ Q S L A S+ L K HA +L + L L+ G + YAR++FD
Sbjct: 9 TKQMLSELLRASSSKPKQL-KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67
Query: 113 KMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSS 172
+M + WN++ Y + + E L++ +R+ T ++K
Sbjct: 68 EMHKPRIFLWNTLFKGYVRN-----QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122
Query: 173 GYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVML 232
G +H + +K G V+ LV +Y KFG++ A+FLF+ MQ +D+V W L
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFL 182
Query: 233 RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGK-----------RHEE-- 279
+ G F + + D +V +L LG R EE
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 280 ---QVQAYAIKLLLYNNNS-------------NVVLWNKKLSGYLQVGDNHGAIECFVNM 323
V+ + + L N+ NVV W+ + GY GD+ A+ F M
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 324 IRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKS 361
++ + VTFL L+A + +N G++ ++S
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 312/616 (50%), Gaps = 84/616 (13%)
Query: 385 GLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAE 444
G R DQF+ +L+A S + L ++H A K T+ D FV T +D+Y G +
Sbjct: 106 GGRLDQFSFLPILKAVSKV-SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 164
Query: 445 AEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGC 504
A +F+ D+ TWN MI Y +A +LF M S DE+ + V ACG
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 505 LLMLKQGKQMHAYAMKSGFELD-------------------------------LCVSSGI 533
++ + ++ + +++ +D L VS+ +
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 534 LDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDE 593
+ Y KCG + DAQ IF+ D V WTTMIS V++ AL ++ +M SG+ PD
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 594 FTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQ 653
+ ++ A + L L++ + +H+ + S+ + +L++MYAKCG ++ +F++
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 654 MDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEA 713
M RN V W++M+ L+ HG + L LF MK VEP+ VTF+GVL CS++GLV E
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 714 YENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACR 773
+ F M ++Y I P++EHY +VD GRA +EA E+I SMP ++ + +L+ ACR
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 774 VQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDP-- 831
+ G+ E GK+ A++++ LEP A VL+SNI+A +W+DV + R M+ KNV K+
Sbjct: 525 IHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGL 584
Query: 832 ---------------------ADLIFAKVEGLIKRIKEGGYVPDTDFVLLDVEEEEKERA 870
++ I+AK++ ++ ++K GYVPD VL+DVEEEEK+
Sbjct: 585 SRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDL 644
Query: 871 LYYHSEKLARAYGLISTPPSS--------VILSN-------------------KEPLYAN 903
+ +HSEKLA +GL++ I+ N +E + +
Sbjct: 645 VLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRD 704
Query: 904 --RFHHLRDGMCPCAD 917
RFH ++G+C C D
Sbjct: 705 RTRFHCYKNGLCSCRD 720
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 32/319 (10%)
Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
S+ + + + G RLD+ + +KA + L +G ++H A K D V
Sbjct: 89 SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV 148
Query: 530 SSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGV 589
+G +DMY CG + A+++F+++ D V W TMI G D A ++ +M+ S V
Sbjct: 149 ETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV 208
Query: 590 VPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDP--------------------- 628
+PDE +V A + R I+ LI+ D D
Sbjct: 209 MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE 268
Query: 629 ----------FVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEET 678
FV ++V Y+KCG ++DA ++F Q + ++ V W M+ + +E
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 679 LKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVD 738
L++FE+M G++PD V+ V+SAC+ G++ +A + H G+E E+ + L++
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALIN 387
Query: 739 ALGRAGRTKEAGELILSMP 757
+ G ++ MP
Sbjct: 388 MYAKCGGLDATRDVFEKMP 406
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 195/456 (42%), Gaps = 79/456 (17%)
Query: 18 VIFSSFTKDTYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
++F+ F +D R+ + ++L + + H + IL+ S L G H
Sbjct: 77 IVFNPFLRDLSRSSEPRA-TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 78 RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
+ + D F+ M MY+ CG + YAR +FD+M RD+++WN+++ Y G
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL--- 192
Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDE--- 194
V E F+LF +++S + L ++ C +G + + ++ + ++ + D
Sbjct: 193 --VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 195 ----------------------------FVSGALVNIYSKFGKIREAKFLFDGMQERDVV 226
FVS A+V+ YSK G++ +A+ +FD +++D+V
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 227 LWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG-----KRHEEQV 281
W M+ AY E+ + +E +F ++ SG+ PD S+ V+ ++LG K +
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 282 QAYAIKLLLYNNNS------------------------NVVLWNKKLSGYLQVGDNHGAI 317
++ L NN+ NVV W+ ++ G+ A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
F M + NV+ + VTF+ L + + + G++I ++++ ++
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI---------FASMTDEYNITPKL 481
Query: 378 SKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQI 413
GC+ D F A++LR + + E + ++ +
Sbjct: 482 EHYGCM----VDLFGRANLLREALEVIESMPVASNV 513
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 222/507 (43%), Gaps = 43/507 (8%)
Query: 106 YARRLFDKMPDR-DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAP 164
YA +F +P + I +N L + S E A ++ +R + + P
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRA-----TILFYQRIRHVGGRLDQFSFLP 116
Query: 165 LLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERD 224
+LK ++ +HG A KI + D FV +++Y+ G+I A+ +FD M RD
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 225 VVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAY 284
VV W M+ Y G +E F LF ++ S + P DE + C ++S G+ +
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-DEMILC--NIVSACGRTGNMRYNRA 233
Query: 285 AIKLLLYNN-NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVA 343
+ L+ N+ + L ++ Y G A E F M N+ V+ A V+
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL-------FVSTAMVS 286
Query: 344 G---TDNLNLGQQIHGTTLK------SGFYSAVIVGN---SLINMYSKMGCVCGLRTDQF 391
G L+ Q I T K + SA + + + ++ +M C G++ D
Sbjct: 287 GYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVV 345
Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN 451
++ SV+ A ++L L +K +H N ++ ++ ALI++Y + G + +FE
Sbjct: 346 SMFSVISACANLG-ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 452 KDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQG 511
++ +W++MI + + AL LF+ M +E+T + C ++++G
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 512 KQMHA-----YAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMI 565
K++ A Y + E C ++D++ + + +A + +P A + V W +++
Sbjct: 465 KKIFASMTDEYNITPKLEHYGC----MVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520
Query: 566 SGCVDNGEEDLALSIYHQMRLSGVVPD 592
S C +GE L L + R+ + PD
Sbjct: 521 SACRIHGE--LELGKFAAKRILELEPD 545
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 33/269 (12%)
Query: 57 FSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPD 116
FS++ + L K H+ I + + + N L+ MY++CG L R +F+KMP
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVW 176
R+++SW+S++ A + GE ++ LF +++ + +T +L C SG V
Sbjct: 408 RNVVSWSSMINALSMHGEA-----SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 177 ASETVHGYALKIGLVWDEFV-------SGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLW 228
+ + + DE+ G +V+++ + +REA + + M +VV+W
Sbjct: 463 EGKKI------FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 229 KVML---RAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYA 285
++ R + E G+ ++L PD + L ++S++ R +
Sbjct: 517 GSLMSACRIHGELELGKFAAKRILELE-----PDHDG---ALVLMSNIYAREQRWEDVRN 568
Query: 286 IKLLLYNNNSNVVLWNKKLSGYLQVGDNH 314
I+ ++ N V K LS Q G +H
Sbjct: 569 IRRVMEEKN---VFKEKGLSRIDQNGKSH 594
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 319 bits (817), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 327/627 (52%), Gaps = 60/627 (9%)
Query: 346 DNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPE 405
D + + TL SG+ A +++ ++ +M + G D FTL+ ++ A +
Sbjct: 98 DEIPQPDTVSYNTLISGYADARETFAAMV-LFKRMRKL-GFEVDGFTLSGLIAACC---D 152
Query: 406 GLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGF-DLATWNAMI 464
+ L KQ+H ++ + S V+ A + Y + G + EA +F D D +WN+MI
Sbjct: 153 RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMI 212
Query: 465 FGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFE 524
Y KAL L+ M G ++D T+A+ + A L L G+Q H +K+GF
Sbjct: 213 VAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFH 272
Query: 525 LDLCVSSGILDMYVKCGA---MVDAQSIFNDIPAPDDVAWTTMISGCVDNGE-EDLALSI 580
+ V SG++D Y KCG M D++ +F +I +PD V W TMISG N E + A+
Sbjct: 273 QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKS 332
Query: 581 YHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPF-VGISLVDMYA 639
+ QM+ G PD+ +F + A S L++ Q +QIH IK S+ V +L+ +Y
Sbjct: 333 FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 640 KCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIG 699
K GN++DA +F +M N V +N M+ G AQHG+G E L L++ M G+ P+ +TF+
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452
Query: 700 VLSACSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFE 759
VLSAC++ G V E E F+ M+E + IEPE EHYS ++D LGRAG+ +EA I +MP++
Sbjct: 453 VLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
Query: 760 ASASMHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSAR 819
+ ALLGACR + + A +LM ++P ++ YV+L+N++A A +W+++ S R
Sbjct: 513 PGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVR 572
Query: 820 GEMKRKNVKKDPA---------DLIFAK--------------VEGLIKRIKEGGYVPDTD 856
M+ K ++K P +F +E ++K++K+ GYV D
Sbjct: 573 KSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKK 632
Query: 857 FVLLDVEEEEKERA---LYYHSEKLARAYGLISTPPSS--VILSN--------------- 896
+ ++ +E + L +HSEKLA A+GL+ST V++ N
Sbjct: 633 WAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMS 692
Query: 897 ----KEPLYAN--RFHHLRDGMCPCAD 917
+E + + RFH +DG C C D
Sbjct: 693 AVAGREIIVRDNLRFHCFKDGKCSCGD 719
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/566 (24%), Positives = 243/566 (42%), Gaps = 97/566 (17%)
Query: 161 TLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGM 220
T LL ++ ++ +++H +K + ++S VN+YSK G++ A+ F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 221 QERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
+E +V + V+++AYA++ LF ++ + PD
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PD--------------------- 104
Query: 281 VQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
V +N +SGY + A+ F M + + D T +A
Sbjct: 105 ----------------TVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIA 148
Query: 341 AVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV----------------- 383
A D ++L +Q+H ++ GF S V N+ + YSK G +
Sbjct: 149 ACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 384 ---------------------------CGLRTDQFTLASVLRASSSLPEGLHLSKQIHVH 416
G + D FTLASVL A +SL + L +Q H
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL-DHLIGGRQFHGK 265
Query: 417 AIKNDTVADSFVSTALIDVYCRNG---SMAEAEYLFENKDGFDLATWNAMIFGYILSNN- 472
IK +S V + LID Y + G M ++E +F+ DL WN MI GY ++
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 473 SHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELD-LCVSS 531
S +A++ F M G R D+ + AC L Q KQ+H A+KS + + V++
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 532 GILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVP 591
++ +Y K G + DA+ +F+ +P + V++ MI G +G AL +Y +M SG+ P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 592 DEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYAKCGNIEDAYI 649
++ TF ++ A + +++G++ + N +K +P ++D+ + G +E+A
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQE-YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 650 LFKQMDMR-NTVLWNAMLVGLAQHGN 674
M + +V W A+L +H N
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKN 530
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 36/372 (9%)
Query: 339 LAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLR 398
L +VA D L G+ +H +KS S+ + N +N+YSK G + + A
Sbjct: 16 LKSVAERD-LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCG--------RLSYARAAF 66
Query: 399 ASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLA 458
S+ P + F ++ Y ++ + A LF+ D
Sbjct: 67 YSTEEP--------------------NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 459 TWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYA 518
++N +I GY + + A+ LF M G +D T++ + AC + L KQ+H ++
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFS 164
Query: 519 MKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPA-PDDVAWTTMISGCVDNGEEDLA 577
+ GF+ V++ + Y K G + +A S+F + D+V+W +MI + E A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224
Query: 578 LSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDM 637
L++Y +M G D FT A ++ A + L L GRQ H LIK + VG L+D
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDF 284
Query: 638 YAKCGNIE---DAYILFKQMDMRNTVLWNAMLVGLAQHGN-GEETLKLFEDMKAHGVEPD 693
Y+KCG + D+ +F+++ + V+WN M+ G + + EE +K F M+ G PD
Sbjct: 285 YSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPD 344
Query: 694 SVTFIGVLSACS 705
+F+ V SACS
Sbjct: 345 DCSFVCVTSACS 356
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/591 (23%), Positives = 236/591 (39%), Gaps = 142/591 (24%)
Query: 59 ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVY------------ 106
+L +++ DL GKS HA + S +L+N+ + +YS+CG L Y
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 107 -------------------ARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLF 147
AR+LFD++P D +S+N++++ YA + E A V LF
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV-----LF 128
Query: 148 RSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKF 207
+ +R+ TL+ L+ C V + +H +++ G V+ A V YSK
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 208 GKIREAKFLFDGMQE-RDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCV 266
G +REA +F GM E RD V W M+ AY ++ G + L+ ++ G D ++ V
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 267 LGVISDL----GKRHEEQVQAYAIKLLLYNN----------------------------- 293
L ++ L G R Q IK + N
Sbjct: 247 LNALTSLDHLIGGR---QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 294 --NSNVVLWNKKLSGY-LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNL 350
+ ++V+WN +SGY + + A++ F M R + D +F+ +A + + +
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 363
Query: 351 GQQIHGTTLKSGFYSAVI-VGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHL 409
+QIHG +KS S I V N+LI++Y K G L +PE
Sbjct: 364 CKQIHGLAIKSHIPSNRISVNNALISLYYKSG----------NLQDARWVFDRMPE---- 409
Query: 410 SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYIL 469
++A+ SF +I Y ++G EA
Sbjct: 410 -----LNAV-------SF--NCMIKGYAQHGHGTEA------------------------ 431
Query: 470 SNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCV 529
L L+ M SG ++IT + AC + +G Q + MK F+++
Sbjct: 432 -------LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEA 483
Query: 530 S--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
S ++D+ + G + +A+ + +P P VAW ++ C + LA
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGS---LVYARRLFDKM 114
S+L S L+ G+ H +++ + + + + L+ YS+CG + + ++F ++
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304
Query: 115 PDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGY 174
DL+ WN++++ Y+ N E E + FR ++ + + C +
Sbjct: 305 LSPDLVVWNTMISGYSM----NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 175 VWASETVHGYALKIGLVWDEF-VSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLR 233
+ +HG A+K + + V+ AL+++Y K G +++A+++FD M E + V + M++
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 234 AYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQ 280
YA++G G E L+ + SG+ P+ + VL + GK E Q
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQ 467
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 32/147 (21%)
Query: 590 VPDEF-TFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNI---- 644
P +F TF L+ S L G+ +HA +K +S ++ V++Y+KCG +
Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 645 ----------------------EDAYI-----LFKQMDMRNTVLWNAMLVGLAQHGNGEE 677
+D+ I LF ++ +TV +N ++ G A
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 678 TLKLFEDMKAHGVEPDSVTFIGVLSAC 704
+ LF+ M+ G E D T G+++AC
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAAC 150
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 318 bits (816), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 227/727 (31%), Positives = 338/727 (46%), Gaps = 76/727 (10%)
Query: 139 NVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWD-EFVS 197
N + F L S +++ R LL+ C S +G LK G + V+
Sbjct: 6 NSSYRFYLSSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVA 65
Query: 198 GALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLC 257
L+ +YS+ GK+ A+ LFD M +R+ W M+ Y +G F +
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMM 119
Query: 258 PDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAI 317
P+ + + V+S K E V A +L +VV N L GY+ G A+
Sbjct: 120 PERDGYSWNV-VVSGFAKAGELSV---ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEAL 175
Query: 318 ECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMY 377
F + N D++T L A A + L G+QIH L G + +SL+N+Y
Sbjct: 176 RLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVY 232
Query: 378 SKMGCVCG-LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVY 436
+K CG LR + L + P+ LS ALI Y
Sbjct: 233 AK----CGDLRMASYMLEQIRE-----PDDHSLS--------------------ALISGY 263
Query: 437 CRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIA 496
G + E+ LF+ K + WN+MI GYI +N +AL LF+ M R D T+A
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLA 322
Query: 497 TAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP 556
+ AC L L+ GKQMH +A K G D+ V+S +LDMY KCG+ ++A +F+++ +
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 557 DDV-------------------------------AWTTMISGCVDNGEEDLALSIYHQMR 585
D + +W +M +G NG L +HQM
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 586 LSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIE 645
+ DE + + ++ A + +++LE G Q+ A + SD V SL+D+Y KCG +E
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 646 DAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACS 705
+F M + V WN+M+ G A +G G E + LF+ M G+ P +TF+ VL+AC+
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 706 YTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMH 765
Y GLV E + F M+ +G P+ EH+S +VD L RAG +EA L+ MPF+ SM
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMW 622
Query: 766 RALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRK 825
++L C G GK AEK++ LEP +S AYV LS IFA + W+ R M+
Sbjct: 623 SSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMREN 682
Query: 826 NVKKDPA 832
NV K+P
Sbjct: 683 NVTKNPG 689
Score = 219 bits (558), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 170/658 (25%), Positives = 311/658 (47%), Gaps = 93/658 (14%)
Query: 73 KSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHS 132
K T R + D + N +++ +++ G L ARRLF+ MP++D+++ NS+L Y +
Sbjct: 109 KGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 133 GEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVW 192
G E RLF+ L S +TL +LK C + + +H L G+
Sbjct: 169 GYAE-----EALRLFKELNFS---ADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC 220
Query: 193 DEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLH 252
D ++ +LVN+Y+K G +R A ++ + ++E
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIRE------------------------------ 250
Query: 253 RSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGD 312
PDD S+ ++ ++ G+ +E + L +N V+LWN +SGY+
Sbjct: 251 -----PDDHSLSALISGYANCGRVNESR------GLFDRKSNRCVILWNSMISGYIA--- 296
Query: 313 NHGAIECFV--NMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVG 370
N+ +E V N +R+ + DS T + A G L G+Q+H K G ++V
Sbjct: 297 NNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356
Query: 371 NSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVST 430
++L++MYSK G S E L ++ + D+ +
Sbjct: 357 STLLDMYSKCG--------------------SPMEACKLFSEVESY--------DTILLN 388
Query: 431 ALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERL 490
++I VY G + +A+ +FE + L +WN+M G+ + + + LE F MH
Sbjct: 389 SMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT 448
Query: 491 DEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIF 550
DE+++++ + AC + L+ G+Q+ A A G + D VSS ++D+Y KCG + + +F
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 551 NDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALE 610
+ + D+V W +MISG NG+ A+ ++ +M ++G+ P + TF +++ A + +E
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 611 QGRQIHANLIKLDCSSDP----FVGISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAM 665
+GR++ ++ K+D P F +VD+ A+ G +E+A L ++M + +W+++
Sbjct: 569 EGRKLFESM-KVDHGFVPDKEHFS--CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSI 625
Query: 666 LVGLAQHGNGEETLKLFEDMKAHGVEPD-SVTFIGVLSACSYTGLVSEAYENFHLMRE 722
L G +G K E K +EP+ SV ++ + + + +G + LMRE
Sbjct: 626 LRGCVANGYKAMGKKAAE--KIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 221/549 (40%), Gaps = 141/549 (25%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYA---------- 107
++L+ L GK HA+IL D + ++L+ +Y++CG L A
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 108 ---------------------RRLFDKMPDRDLISWNSILAAYAHSGEGNAENVT-EGFR 145
R LFD+ +R +I WNS+++ Y A N+ E
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI------ANNMKMEALV 305
Query: 146 LFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYS 205
LF +R SR TLA ++ C+ G++ + +H +A K GL+ D V+ L+++YS
Sbjct: 306 LFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 206 KFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQC 265
K G EA LF ++ D +L M++ Y C
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVY---------------------------FSC 397
Query: 266 VLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
G I D KR E+++ N +++ WN +G+ Q G +E F M +
Sbjct: 398 --GRIDD-AKRVFERIE-----------NKSLISWNSMTNGFSQNGCTVETLEYFHQMHK 443
Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCG 385
++ D V+ ++A A +L LG+Q+ G S +V +SLI++Y C CG
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY----CKCG 499
Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
+ +++ +K+D V ++I Y NG EA
Sbjct: 500 F--------------------VEHGRRVFDTMVKSDEVP----WNSMISGYATNGQGFEA 535
Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
++LF M +G R +IT + AC
Sbjct: 536 -------------------------------IDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 506 LMLKQGKQM-HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAP-DDVAWTT 563
++++G+++ + + GF D S ++D+ + G + +A ++ ++P D W++
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 564 MISGCVDNG 572
++ GCV NG
Sbjct: 625 ILRGCVANG 633
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S++ S S L LG+ AR D+ ++++L+ +Y +CG + + RR+FD M
Sbjct: 455 SVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS 514
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWA 177
D + WNS+++ YA +G+G E LF+ + + +++T +L C G V
Sbjct: 515 DEVPWNSMISGYATNGQG-----FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEE 569
Query: 178 SETVHGYALKI--GLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ-ERDVVLWKVMLRA 234
+ ++K+ G V D+ +V++ ++ G + EA L + M + D +W +LR
Sbjct: 570 GRKLF-ESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
Query: 235 YAENGF 240
NG+
Sbjct: 629 CVANGY 634
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 224/760 (29%), Positives = 363/760 (47%), Gaps = 99/760 (13%)
Query: 162 LAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIY----------------- 204
LA LL+ + + +HG+ +++G+ D ++ L+++Y
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 205 --------------SKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVD 250
K G + EA +FDGM ERDVV W M+ GF E+ ++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 251 LHRSGLCPDDESVQCVLGVISDL-----GKR-HEEQVQA--------------------- 283
+ G P ++ VL S + G R H V+
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 284 ---YAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALA 340
Y +++ + N V + + G + A++ F M VQ DSV L+
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 341 AVA---GTDNLN------LGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQF 391
A G D+L+ LG+QIH L+ GF + + NSL+ +Y+K
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAK--------NKDM 300
Query: 392 TLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVS--TALID-------VYC----- 437
A ++ A +PE +S I + + +D V T + D V C
Sbjct: 301 NGAELIFAE--MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 438 ---RNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEIT 494
R+G + +F + ++ WNAM+ GY + +A+ F M + D+ T
Sbjct: 359 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418
Query: 495 IATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP 554
++ + +C L L+ GKQ+H +++ + + SG++ +Y +C M ++ IF+D
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478
Query: 555 APDDVA-WTTMISGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQG 612
D+A W +MISG N + AL ++ +M + V+ P+E +FA ++ + S L +L G
Sbjct: 479 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 538
Query: 613 RQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQH 672
RQ H ++K SD FV +L DMY KCG I+ A F + +NTV+WN M+ G +
Sbjct: 539 RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 598
Query: 673 GNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEH 732
G G+E + L+ M + G +PD +TF+ VL+ACS++GLV E M+ +GIEPE++H
Sbjct: 599 GRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDH 658
Query: 733 YSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLMALE 792
Y +VD LGRAGR ++A +L + P+++S+ + LL +CRV GD + VAEKLM L+
Sbjct: 659 YICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718
Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
P S+AYVLLSN +++ QWDD + +G M + V K P
Sbjct: 719 PQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 185/696 (26%), Positives = 306/696 (43%), Gaps = 82/696 (11%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
S+LR L GK H I+ D +L N L+ +Y CG YAR++FD+M R
Sbjct: 11 SLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR 70
Query: 118 DLISWNSILAAYAHSGE-GNAENVTEGFR-------------------------LFRSLR 151
D+ SWN+ L G+ G A V +G +++ +
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 152 ESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIR 211
SR TLA +L C HG A+K GL + FV AL+++Y+K G I
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 212 EAKF-LFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGV- 269
+ +F+ + + + V + ++ A E +F + G+ D + +L +
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 270 --------ISDL-GKRHEEQVQAYAIKLL----LYNNNS--------------------- 295
+S++ G +Q+ A++L L+ NNS
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 296 ---NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQ 352
NVV WN + G+ Q + ++E M S Q + VT + L A + ++ G+
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 353 QIHGTTLKSGF--YSAVIVGNSLINMYSKMGCVCGLRTDQF-------TLASVLRASSSL 403
+I + + ++A++ G S Y + + R QF T SV+ +S +
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEA--ISNFRQMQFQNLKPDKTTLSVILSSCAR 428
Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFEN-KDGFDLATWNA 462
L KQIH I+ + +S + + LI VY M +E +F++ + D+A WN+
Sbjct: 429 LRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNS 488
Query: 463 MIFGYILSNNSHKALELFSHMHTSGERL-DEITIATAVKACGCLLMLKQGKQMHAYAMKS 521
MI G+ + KAL LF MH + +E + AT + +C L L G+Q H +KS
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS 548
Query: 522 GFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIY 581
G+ D V + + DMY KCG + A+ F+ + + V W MI G NG D A+ +Y
Sbjct: 549 GYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 582 HQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVG--ISLVDMYA 639
+M SG PD TF ++ A S +E G +I +++ ++ +P + I +VD
Sbjct: 609 RKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH-GIEPELDHYICIVDCLG 667
Query: 640 KCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGN 674
+ G +EDA L + + ++VLW +L HG+
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/587 (24%), Positives = 258/587 (43%), Gaps = 70/587 (11%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLV-YARRLFDKMPD 116
S+L D + G H + + + F+ N L++MY++CG +V Y R+F+ +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 117 RDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRE------SITFTSRLTLAPLLKLCL 170
+ +S+ +++ A + V E ++FR + E S+ ++ L+++ + C
Sbjct: 203 PNEVSYTAVIGGLARENK-----VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 171 SSGYVWASE---TVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVL 227
S ++ +E +H AL++G D ++ +L+ IY+K + A+ +F M E +VV
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 228 WKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK 287
W +M+ + + ++ + SG P++ + VLG G + +I
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 288 LLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDN 347
+V WN LSGY AI F M N++ D T V L++ A
Sbjct: 378 ------QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF 431
Query: 348 LNLGQQIHGTTLKSGFYSAVIVGNSLINMYSK-------------------MGC----VC 384
L G+QIHG +++ + + LI +YS+ + C +
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 491
Query: 385 GLR----------------------TDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDT 422
G R ++ + A+VL + S L LH +Q H +K+
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH-GRQFHGLVVKSGY 550
Query: 423 VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSH 482
V+DSFV TAL D+YC+ G + A F+ + WN MI GY + +A+ L+
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 483 MHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK-SGFELDLCVSSGILDMYVKCG 541
M +SGE+ D IT + + AC +++ G ++ + + G E +L I+D + G
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 670
Query: 542 AMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQ-MRL 586
+ DA+ + P V W ++S C +G+ LA + + MRL
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 717
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 236/802 (29%), Positives = 378/802 (47%), Gaps = 105/802 (13%)
Query: 180 TVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAEN 238
T+HG +K GL D V A + Y + + A LFD M +RD + W ++ +
Sbjct: 8 TIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRS 67
Query: 239 GFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDL-GKRHEEQVQAYAIKLLLYNNNSNV 297
G E+ LF ++ SG D ++ +L V S+ G Q+ Y ++L L SNV
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL---ESNV 124
Query: 298 VLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQ-YDSV-TFLVALAAVAGTDNLNLGQQIH 355
+ N + Y + G + + F +M N+ ++S+ + L V D + L ++
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYV--DDAIGLLDEME 182
Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMGC------------VCGLRTDQFTLASVLRASSSL 403
LK ++ NSL++ Y+ G + GL+ +++S+L+A +
Sbjct: 183 ICGLKPD----IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE- 237
Query: 404 PEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAM 463
P L L K IH + ++N D +V T LID+Y + G + A +F+ D ++ WN++
Sbjct: 238 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 464 IFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGF 523
+ G + A L M G + D IT + L GK A
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL-----GKPEKA------- 345
Query: 524 ELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQ 583
LD+ G M + AP+ V+WT + SGC NG AL ++ +
Sbjct: 346 -LDVI------------GKMKEKGV------APNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 584 MRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGN 643
M+ GV P+ T + L+K CL+ L G+++H ++ + D +V +LVDMY K G+
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 644 IEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSA 703
++ A +F + ++ WN ML+G A G GEE + F M G+EPD++TF VLS
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 704 CSYTGLVSEAYENFHLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASAS 763
C +GLV E ++ F LMR +YGI P +EH S +VD LGR+G EA + I +M + A+
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566
Query: 764 MHRALLGACRVQGDTETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMK 823
+ A L +C++ D E + ++L LEP +S+ Y+++ N+++ N+W+DV R M+
Sbjct: 567 IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 626
Query: 824 RKNVK------------------------KDPADLIFAKVEGLIKRIKEGGYVPDTDFVL 859
V+ D D+ F ++ L+ +K+ GYVPDT +
Sbjct: 627 NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYF-ELYKLVSEMKKSGYVPDTSCIH 685
Query: 860 LDVEEEEKERALYYHSEKLARAYGLISTP---PSSV------------------ILSNKE 898
D+ + EKE+ L H+EKLA YGLI P V +L N+E
Sbjct: 686 QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNRE 745
Query: 899 PLYAN--RFHHLRDGMCPCADN 918
+ R HH RDG C C D+
Sbjct: 746 IVLQEGARVHHFRDGKCSCNDS 767
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 269/597 (45%), Gaps = 59/597 (9%)
Query: 95 MTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESI 154
M Y RC SL +A +LFD+MP RD ++WN I+ SG N E E LFR ++ S
Sbjct: 30 MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG--NWEKAVE---LFREMQFSG 84
Query: 155 TFTSRLTLAPLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAK 214
T+ LL++C + +HGY L++GL + + +L+ +YS+ GK+ ++
Sbjct: 85 AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 215 FLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLG 274
+F+ M++R++ W +L +Y + G+ ++ L ++ GL PD
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD--------------- 189
Query: 275 KRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVT 334
+V WN LSGY G + AI M + ++ + +
Sbjct: 190 ----------------------IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 335 FLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT--DQFT 392
L AVA +L LG+ IHG L++ + V V +LI+MY K G + R D
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 393 LASVLRASSSLPEGLHL------SKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA- 445
+++ A +SL GL ++ + + K D+ +L Y G +A
Sbjct: 288 AKNIV-AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 446 ---EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKAC 502
+ E ++ +W A+ G + N AL++F M G + T++T +K
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 503 GCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWT 562
GCL +L GK++H + ++ D V++ ++DMY K G + A IF I +W
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466
Query: 563 TMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCLTALEQGRQIHANLIKL 622
M+ G G + ++ + M +G+ PD TF ++ +++G + + +L++
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMRS 525
Query: 623 DCSSDPFVG--ISLVDMYAKCGNIEDAYILFKQMDMR-NTVLWNAMLVGLAQHGNGE 676
P + +VD+ + G +++A+ + M ++ + +W A L H + E
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLE 582
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/585 (21%), Positives = 233/585 (39%), Gaps = 101/585 (17%)
Query: 72 GKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAH 131
G+ H +L + + N+L+ MYSR G L +R++F+ M DR+L SWNSIL++Y
Sbjct: 108 GRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK 167
Query: 132 SG----------EGNAENVTEGFRLFRSL----------RESITFTSRLTLA-------- 163
G E + + SL +++I R+ +A
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 164 --PLLKLCLSSGYVWASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQ 221
LL+ G++ + +HGY L+ L +D +V L+++Y K G + A+ +FD M
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 222 ERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQV 281
+++V W ++ + ++ L + + + G+ PD + + + LGK E+
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK--PEKA 345
Query: 282 QAYAIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAA 341
K+ NVV W SG + G+ A++ F+ M V ++ T L
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 342 VAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASS 401
+ L+ G+++HG L+ V +L++MY K G
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG-------------------- 445
Query: 402 SLPEGLHLSKQIHVH-AIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATW 460
L I + IKN ++A +W
Sbjct: 446 ------DLQSAIEIFWGIKNKSLA----------------------------------SW 465
Query: 461 NAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMK 520
N M+ GY + + + FS M +G D IT + + C ++++G + + M+
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMR 524
Query: 521 SGFELDLCVS--SGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
S + + + S ++D+ + G + +A + PD W +S C DL
Sbjct: 525 SRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC--KIHRDLE 582
Query: 578 LSIYHQMRLSGVVP-DEFTFAILVKASSCLTALEQGRQIHANLIK 621
L+ RL + P + + +++ S L E +I NL++
Sbjct: 583 LAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR-NLMR 626
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 71/317 (22%)
Query: 29 RNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHARILNSSQIPDR 88
+ L ++++L +Q + S+SS S+L+ L LGK+ H IL + D
Sbjct: 203 KGLSKDAIAVLKRMQIAGLKPSTSSIS--SLLQAVAEPGHLKLGKAIHGYILRNQLWYDV 260
Query: 89 FLTNNLMTMYSRCGSLVYARRLFDKMPDR------------------------------- 117
++ L+ MY + G L YAR +FD M +
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 118 ----DLISWNSILAAYAHSG--------------EGNAENVTEGFRLFRSLRESITFTSR 159
D I+WNS+ + YA G +G A NV +F ++ F +
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 160 L----------------TLAPLLKL--CLSSGYVWASETVHGYALKIGLVWDEFVSGALV 201
L T++ LLK+ CLS + + + VHG+ L+ L+ D +V+ ALV
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLS--LLHSGKEVHGFCLRKNLICDAYVATALV 438
Query: 202 NIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHLFVDLHRSGLCPDDE 261
++Y K G ++ A +F G++ + + W ML YA G GEE F + +G+ PD
Sbjct: 439 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 498
Query: 262 SVQCVLGVISDLGKRHE 278
+ VL V + G E
Sbjct: 499 TFTSVLSVCKNSGLVQE 515
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 19 IFSSFTKD-TYRNLPSFSLSLLPFLQKSHFSSSSSSSQWFSILRHAISTSDLLLGKSTHA 77
IFS +K+ +RN +L F++ +++ ++L+ S L GK H
Sbjct: 367 IFSGCSKNGNFRN------ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420
Query: 78 RILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAAYAHSGEGNA 137
L + I D ++ L+ MY + G L A +F + ++ L SWN +L YA G G
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE- 479
Query: 138 ENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
EG F + E+ +T +L +C +SG V
Sbjct: 480 ----EGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLV 513
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 316 bits (809), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 206/727 (28%), Positives = 354/727 (48%), Gaps = 101/727 (13%)
Query: 285 AIKLLLYNNNSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAG 344
A++L N ++ LWN + G+ G A++ + M+ + V+ D+ T+ + +VAG
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 345 TDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCV--------------------- 383
+L G++IH +K GF S V V NSLI++Y K+GC
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 384 ----------------------CGLRTDQFTLASVLRASSSL--PEGLHLSKQIHVHAIK 419
CG + D+F+ S L A S + P+ + K+IH HA++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK---MGKEIHCHAVR 259
Query: 420 NDT-VADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALE 478
+ D V T+++D+Y + G ++ AE +F ++ WN MI Y + A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 479 LFSHM-HTSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMY 537
F M +G + D IT + A L +G+ +H YAM+ GF + + + ++DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 538 VKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFA 597
+CG + A+ IF+ + + ++W ++I+ V NG+ AL ++ ++ S +VPD T A
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 598 ILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMR 657
++ A + +L +GR+IHA ++K S+ + SLV MYA CG++EDA F + ++
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 658 NTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENF 717
+ V WN++++ A HG G ++ LF +M A V P+ TF +L+ACS +G+V E +E F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 718 HLMREKYGIEPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGD 777
M+ +YGI+P +EHY ++D +GR G A + MPF +A + +LL A R D
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 778 TETGKWVAEKLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA-DLIF 836
++ AE++ +E ++ YVLL N++A A +W+DV + M+ K + + + +
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 837 AKVEGLIKRIKEGGYVPDTD-FVLLDV------EEE----------------EKERALYY 873
AK + + + +V + +LDV EE+ + +
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRR 735
Query: 874 HSEKLARAYGLISTPPSSVI---------------------LSNKEPLYANR--FHHLRD 910
HS +LA +GLIST + L+ +E + + FHH +
Sbjct: 736 HSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSN 795
Query: 911 GMCPCAD 917
G C C +
Sbjct: 796 GRCSCGN 802
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/555 (22%), Positives = 242/555 (43%), Gaps = 107/555 (19%)
Query: 59 ILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRD 118
+++ S L GK HA ++ + D ++ N+L+++Y + G A ++F++MP+RD
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 119 LISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWAS 178
++SWNS+++ Y G+G + LF+ + + R + L C
Sbjct: 196 IVSWNSMISGYLALGDGFS-----SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 179 ETVHGYALKIGL-VWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAE 237
+ +H +A++ + D V +++++YSK+G++ A+ +F+GM +R++V W VM+ YA
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 238 NGFGEEVFHLFVDL-HRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIK--------- 287
NG + F F + ++GL PD + +L + L R + YA++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR---TIHGYAMRRGFLPHMVL 367
Query: 288 ----LLLYNN---------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNV 328
+ +Y NV+ WN ++ Y+Q G N+ A+E F + S++
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 329 QYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYSKMGCVCGLRT 388
DS T L A A + +L+ G++IH +KS ++S I+ NSL++MY+ +CG
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA----MCG--- 480
Query: 389 DQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYL 448
L +++ H + D V
Sbjct: 481 -----------------DLEDARKCFNHILLKDVV------------------------- 498
Query: 449 FENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLML 508
+WN++I Y + ++ LFS M S ++ T A+ + AC M+
Sbjct: 499 ----------SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 509 KQGKQM-----HAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWT 562
+G + Y + G E C +LD+ + G A+ ++P P W
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGC----MLDLIGRTGNFSAAKRFLEEMPFVPTARIWG 604
Query: 563 TMISGCVDNGEEDLA 577
++++ ++ + +A
Sbjct: 605 SLLNASRNHKDITIA 619
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 58 SILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDR 117
SIL + L G+ HA I+ S + + N+L+ MY+ CG L AR+ F+ + +
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 118 DLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
D++SWNSI+ AYA G G LF + S ++ T A LL C SG V
Sbjct: 496 DVVSWNSIIMAYAVHGFGRI-----SVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 312/592 (52%), Gaps = 81/592 (13%)
Query: 407 LHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFG 466
L +K +H H +K V ++ L++VY + G+ + A +F+ D W +++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 467 YILSNNSHKALELFSHMHTSGE-RLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFEL 525
+N S K L +FS + +S R D+ + VKAC L + G+Q+H + + S +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 526 DLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLAL------- 578
D V S ++DMY KCG + A+++F+ I + ++WT M+SG +G ++ AL
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 579 ------------------------SIYHQMRLSGV-VPDEFTFAILVKASSCLTALEQGR 613
S++ +MR V + D + +V A + L A GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 614 QIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHG 673
Q+H +I L S F+ +L+DMYAKC ++ A +F +M R+ V W +++VG+AQHG
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 674 NGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGIEPEVEHY 733
E+ L L++DM +HGV+P+ VTF+G++ ACS+ G V + E F M + YGI P ++HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 734 SFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAEKLM-ALE 792
+ L+D LGR+G EA LI +MPF ALL AC+ QG + G +A+ L+ + +
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 793 PFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA----------DLIFA----- 837
D S Y+LLSNI+A+A+ W V+ AR ++ V+KDP ++ +A
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498
Query: 838 ----KVEGLIKRIKE-----GGYVPDTDFVLLDVEEEEKERALYYHSEKLARAYGLISTP 888
+ L+K+++E GYVPDT ++L D++E+EKE+ L++HSE+ A AYGL+
Sbjct: 499 PLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAV 558
Query: 889 PSSVI---------------------LSNKEPLY--ANRFHHLRDGMCPCAD 917
P + I ++ +E + A R+HH + G C C D
Sbjct: 559 PGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCND 610
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/566 (22%), Positives = 224/566 (39%), Gaps = 113/566 (19%)
Query: 69 LLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMPDRDLISWNSILAA 128
L K+ HA I+ + L N L+ +Y +CG+ +A ++FD+MP RD I+W S+L A
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 129 YAHSG-EGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYVWASETVHGYALK 187
+ G +V LR + L+K C + G + VH + +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLR-----PDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 188 IGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAYAENGFGEEVFHL 247
DE V +LV++Y+K G + AK +FD ++ ++ + W M+ YA++G EE L
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 248 FVDLHRSGLCPDDESVQCVLGVISDLGKRHEEQVQAYAIKLLLYNNNSNVVLWNKKLSGY 307
F +L V N+ W +SG+
Sbjct: 194 FR----------------ILPV-------------------------KNLYSWTALISGF 212
Query: 308 LQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLN---LGQQIHGTTLKSGFY 364
+Q G A F M R V D + LV + V NL G+Q+HG + GF
Sbjct: 213 VQSGKGLEAFSVFTEMRRERV--DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD 270
Query: 365 SAVIVGNSLINMYSKMGCVCGLRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVA 424
S V + N+LI+MY+K V +K I D V+
Sbjct: 271 SCVFISNALIDMYAKCSDVIA------------------------AKDIFSRMRHRDVVS 306
Query: 425 DSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMH 484
T+LI ++G +A L+++ M
Sbjct: 307 ----WTSLIVGMAQHGQAEKALALYDD-------------------------------MV 331
Query: 485 TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKS-GFELDLCVSSGILDMYVKCGAM 543
+ G + +E+T + AC + +++G+++ K G L + +LD+ + G +
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 544 VDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKA 602
+A+++ + +P PD+ W ++S C G + + I + S + D T+ +L
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 451
Query: 603 SSCLTALEQGRQIHANLIKLDCSSDP 628
+ + + + L +++ DP
Sbjct: 452 YASASLWGKVSEARRKLGEMEVRKDP 477
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 313 bits (803), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 306/586 (52%), Gaps = 54/586 (9%)
Query: 296 NVVLWNKKLSGYLQVGDNHGAIECFVNMIRSNVQYDSVTFLVALAAVAGTDNLNLGQQIH 355
N+V + ++GY Q G AI ++ M++ ++ D F + A A + ++ LG+Q+H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 356 GTTLKSGFYSAVIVGNSLINMYSKMG----------------------CVCGL------- 386
+K S +I N+LI MY + + G
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 387 ---------------RTDQFTLASVLRASSSL--PEGLHLSKQIHVHAIKNDTVADSFVS 429
+++ S L+A SSL P+ QIH IK++ ++
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD---YGSQIHGLCIKSELAGNAIAG 308
Query: 430 TALIDVYCRNGSMAEAEYLFENKDGFDLATWNAMIFGYILSNNSH--KALELFSHMHTSG 487
+L D+Y R G + A +F+ + D A+WN +I G L+NN + +A+ +FS M +SG
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG--LANNGYADEAVSVFSQMRSSG 366
Query: 488 ERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQ 547
D I++ + + A + L QG Q+H+Y +K GF DL V + +L MY C +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 548 SIFNDIPA-PDDVAWTTMISGCVDNGEEDLALSIYHQMRLSGVVPDEFTFAILVKASSCL 606
++F D D V+W T+++ C+ + + L ++ M +S PD T L++ +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 607 TALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAML 666
++L+ G Q+H +K + + F+ L+DMYAKCG++ A +F MD R+ V W+ ++
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 667 VGLAQHGNGEETLKLFEDMKAHGVEPDSVTFIGVLSACSYTGLVSEAYENFHLMREKYGI 726
VG AQ G GEE L LF++MK+ G+EP+ VTF+GVL+ACS+ GLV E + + M+ ++GI
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 727 EPEVEHYSFLVDALGRAGRTKEAGELILSMPFEASASMHRALLGACRVQGDTETGKWVAE 786
P EH S +VD L RAGR EA I M E + + LL AC+ QG+ + AE
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 787 KLMALEPFDSSAYVLLSNIFAAANQWDDVTSARGEMKRKNVKKDPA 832
++ ++PF+S+A+VLL ++ A++ W++ R MK+ +VKK P
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/598 (23%), Positives = 257/598 (42%), Gaps = 82/598 (13%)
Query: 56 WFSILRHAISTSDLLLGKSTHARILNSSQIPDRFLTNNLMTMYSRCGSLVYARRLFDKMP 115
+ S++ S+ L G+ H ILNS+ D L N++++MY +CGSL AR +FD MP
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 116 DRDLISWNSILAAYAHSGEGNAENVTEGFRLFRSLRESITFTSRLTLAPLLKLCLSSGYV 175
+R+L+S+ S++ Y+ +G+G E RL+ + + + ++K C SS V
Sbjct: 130 ERNLVSYTSVITGYSQNGQG-----AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 176 WASETVHGYALKIGLVWDEFVSGALVNIYSKFGKIREAKFLFDGMQERDVVLWKVMLRAY 235
+ +H +K+ AL+ +Y +F ++ +A +F G+ +D++ W ++ +
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 236 AENGFGEEVFHLFVDLHRSGLCPDDESV--QCVLGVISDLGKRHEEQVQAYAIKLLLYNN 293
++ GF E ++ G+ +E + + S L + Q+ IK L N
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 294 ----------------------------NSNVVLWNKKLSGYLQVGDNHGAIECFVNMIR 325
+ WN ++G G A+ F M
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 326 SNVQYDSVTFLVALAAVAGTDNLNLGQQIHGTTLKSGFYSAVIVGNSLINMYS------- 378
S D+++ L A L+ G QIH +K GF + + V NSL+ MY+
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 379 -------------------------------------KMGCVCGLRTDQFTLASVLRASS 401
K+ V D T+ ++LR
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484
Query: 402 SLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEAEYLFENKDGFDLATWN 461
+ L L Q+H +++K + F+ LID+Y + GS+ +A +F++ D D+ +W+
Sbjct: 485 EI-SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 462 AMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCLLMLKQGKQMHA-YAMK 520
+I GY S +AL LF M ++G + +T + AC + ++++G +++A +
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 521 SGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIP-APDDVAWTTMISGCVDNGEEDLA 577
G S ++D+ + G + +A+ +++ PD V W T++S C G LA
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 167/319 (52%), Gaps = 6/319 (1%)
Query: 386 LRTDQFTLASVLRASSSLPEGLHLSKQIHVHAIKNDTVADSFVSTALIDVYCRNGSMAEA 445
LRT +L +S SL +G ++IH H + ++ D+ ++ ++ +Y + GS+ +A
Sbjct: 67 LRT-YISLICACSSSRSLAQG----RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDA 121
Query: 446 EYLFENKDGFDLATWNAMIFGYILSNNSHKALELFSHMHTSGERLDEITIATAVKACGCL 505
+F+ +L ++ ++I GY + +A+ L+ M D+ + +KAC
Sbjct: 122 REVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181
Query: 506 LMLKQGKQMHAYAMKSGFELDLCVSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMI 565
+ GKQ+HA +K L + ++ MYV+ M DA +F IP D ++W+++I
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241
Query: 566 SGCVDNGEEDLALSIYHQMRLSGVV-PDEFTFAILVKASSCLTALEQGRQIHANLIKLDC 624
+G G E ALS +M GV P+E+ F +KA S L + G QIH IK +
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL 301
Query: 625 SSDPFVGISLVDMYAKCGNIEDAYILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFED 684
+ + G SL DMYA+CG + A +F Q++ +T WN ++ GLA +G +E + +F
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQ 361
Query: 685 MKAHGVEPDSVTFIGVLSA 703
M++ G PD+++ +L A
Sbjct: 362 MRSSGFIPDAISLRSLLCA 380
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 133/238 (55%), Gaps = 2/238 (0%)
Query: 470 SNNSHKALELFSHMH-TSGERLDEITIATAVKACGCLLMLKQGKQMHAYAMKSGFELDLC 528
SN +ALE F S ++ T + + AC L QG+++H + + S + D
Sbjct: 44 SNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI 103
Query: 529 VSSGILDMYVKCGAMVDAQSIFNDIPAPDDVAWTTMISGCVDNGEEDLALSIYHQMRLSG 588
+++ IL MY KCG++ DA+ +F+ +P + V++T++I+G NG+ A+ +Y +M
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED 163
Query: 589 VVPDEFTFAILVKASSCLTALEQGRQIHANLIKLDCSSDPFVGISLVDMYAKCGNIEDAY 648
+VPD+F F ++KA + + + G+Q+HA +IKL+ SS +L+ MY + + DA
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 649 ILFKQMDMRNTVLWNAMLVGLAQHGNGEETLKLFEDMKAHGV-EPDSVTFIGVLSACS 705
+F + M++ + W++++ G +Q G E L ++M + GV P+ F L ACS
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 333,099,213
Number of Sequences: 539616
Number of extensions: 13959427
Number of successful extensions: 42699
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 31800
Number of HSP's gapped (non-prelim): 3151
length of query: 919
length of database: 191,569,459
effective HSP length: 127
effective length of query: 792
effective length of database: 123,038,227
effective search space: 97446275784
effective search space used: 97446275784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)