Query         002461
Match_columns 919
No_of_seqs    572 out of 4053
Neff          7.5 
Searched_HMMs 13730
Date          Tue Mar 26 16:29:51 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002461.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1182-1186//hhsearch_scop/002461hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0       0       0  363.8  17.6  269  597-883     6-294 (299)
  2 d1opja_ d.144.1.7 (A:) Abelson 100.0       0       0  365.7  15.6  265  607-889    18-283 (287)
  3 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0       0       0  361.6  18.9  254  609-881     8-261 (263)
  4 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0       0       0  360.9  18.9  255  607-880    14-268 (272)
  5 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0       0       0  358.7  18.8  257  609-881    11-272 (276)
  6 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0       0       0  353.4  19.0  256  607-878    38-323 (325)
  7 d1mqba_ d.144.1.7 (A:) epha2 r 100.0       0       0  350.4  19.4  258  609-883    10-274 (283)
  8 d1nvra_ d.144.1.7 (A:) Cell cy 100.0       0       0  348.1  20.5  250  608-874     7-259 (271)
  9 d1fmka3 d.144.1.7 (A:249-533)  100.0       0       0  349.1  17.7  255  607-880    18-272 (285)
 10 d1yhwa1 d.144.1.7 (A:249-541)  100.0       0       0  344.3  20.6  247  608-874    22-269 (293)
 11 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0       0       0  345.1  19.9  250  609-878     7-257 (258)
 12 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0       0       0  345.1  19.1  249  612-880    13-268 (277)
 13 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0       0       0  345.7  17.9  252  611-881    13-271 (285)
 14 d1lufa_ d.144.1.7 (A:) Musk ty 100.0       0       0  346.2  17.1  258  608-881    15-301 (301)
 15 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0       0       0  341.0  20.8  257  608-881    29-293 (311)
 16 d2jfla1 d.144.1.7 (A:21-308) S 100.0       0       0  341.5  19.4  249  608-874    14-268 (288)
 17 d1xkka_ d.144.1.7 (A:) EGF rec 100.0       0       0  340.8  19.9  255  608-881    11-272 (317)
 18 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0       0       0  347.8  13.7  263  608-878     8-303 (322)
 19 d1t4ha_ d.144.1.7 (A:) Protein 100.0       0       0  338.0  20.0  246  609-874    12-265 (270)
 20 d2j4za1 d.144.1.7 (A:126-388)  100.0       0       0  339.2  18.8  243  608-874     8-254 (263)
 21 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0       0       0  338.0  19.5  254  609-881    13-285 (309)
 22 d1koaa2 d.144.1.7 (A:5915-6264 100.0       0       0  338.4  18.0  250  607-874    27-279 (350)
 23 d1byga_ d.144.1.7 (A:) Carboxy 100.0       0       0  337.7  17.7  249  609-882    10-260 (262)
 24 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0       0       0  340.2  15.4  247  608-874    10-260 (288)
 25 d1koba_ d.144.1.7 (A:) Twitchi 100.0       0       0  335.8  18.8  249  608-874    31-282 (352)
 26 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0       0       0  336.6  17.7  260  607-882    24-308 (311)
 27 d1ywna1 d.144.1.7 (A:818-1166) 100.0       0       0  334.9  18.8  260  607-882    14-297 (299)
 28 d1vjya_ d.144.1.7 (A:) Type I  100.0       0       0  334.6  18.7  269  608-883     5-299 (303)
 29 d1a06a_ d.144.1.7 (A:) Calmodu 100.0       0       0  336.3  17.1  248  608-874    11-263 (307)
 30 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0       0       0  336.3  16.9  243  608-874    17-266 (309)
 31 d2java1 d.144.1.7 (A:3-271) Se 100.0       0       0  339.8  12.9  251  608-874     6-265 (269)
 32 d1mp8a_ d.144.1.7 (A:) Focal a 100.0       0       0  337.1  15.0  259  607-885     8-272 (273)
 33 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0       0       0  334.3  16.7  259  607-882    14-297 (299)
 34 d1p4oa_ d.144.1.7 (A:) Insulin 100.0       0       0  335.0  16.0  259  609-883    23-296 (308)
 35 d1jksa_ d.144.1.7 (A:) Death-a 100.0       0       0  328.9  20.4  249  607-874    11-270 (293)
 36 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0       0       0  326.2  20.8  245  608-874     7-260 (337)
 37 d1fota_ d.144.1.7 (A:) cAMP-de 100.0       0       0  324.5  19.6  242  608-874     6-256 (316)
 38 d1omwa3 d.144.1.7 (A:186-549)  100.0       0       0  324.3  19.6  246  608-874     6-264 (364)
 39 d2ozaa1 d.144.1.7 (A:51-385) M 100.0       0       0  322.5  20.5  246  611-874    17-271 (335)
 40 d1u46a_ d.144.1.7 (A:) Activat 100.0       0       0  330.6  13.2  254  608-879    10-272 (273)
 41 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0       0       0  322.6  18.5  257  608-880     9-275 (277)
 42 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0       0       0  322.1  18.5  242  608-874    43-293 (350)
 43 d1ua2a_ d.144.1.7 (A:) Cell di 100.0       0       0  319.1  19.3  254  612-874     4-279 (299)
 44 d1xjda_ d.144.1.7 (A:) Protein 100.0       0       0  320.2  15.7  245  608-874     4-254 (320)
 45 d1phka_ d.144.1.7 (A:) gamma-s 100.0       0       0  314.9  19.7  248  608-874     5-269 (277)
 46 d1tkia_ d.144.1.7 (A:) Titin,  100.0       0       0  317.7  15.9  248  608-874     7-257 (321)
 47 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0       0       0  310.8  19.4  259  609-874     5-282 (298)
 48 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0       0       0  306.2  21.5  259  608-874     9-292 (305)
 49 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0       0       0  307.0  20.7  263  607-880    21-310 (350)
 50 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0       0       0  306.1  21.1  258  609-874     5-280 (286)
 51 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0       0       0  309.9  15.5  242  608-879     6-261 (273)
 52 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 2.8E-45       0  298.4  20.6  261  608-874    12-304 (318)
 53 d1ckia_ d.144.1.7 (A:) Casein  100.0 5.6E-45       0  297.3  18.5  260  608-881     9-278 (299)
 54 d1csna_ d.144.1.7 (A:) Casein  100.0 1.3E-44       0  294.9  20.4  258  608-881     7-278 (293)
 55 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 1.3E-44       0  294.9  20.4  260  608-874     4-282 (292)
 56 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 4.2E-45       0  297.9  17.8  250  608-874    26-291 (322)
 57 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 1.8E-44       0  293.9  20.8  254  607-874    36-318 (328)
 58 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 2.8E-45       0  299.2  15.9  260  608-874    10-294 (345)
 59 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 8.4E-45       0  296.1  18.2  258  608-879    20-307 (346)
 60 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 9.1E-44       0  289.5  16.7  254  609-874    20-310 (355)
 61 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 2.9E-43       0  286.3  12.0  258  608-878    20-306 (348)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0   3E-39 2.2E-43  261.1  15.7  263  608-879    15-334 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 4.6E-22 3.3E-26  153.1  10.4  170  609-800     3-190 (191)
 64 d1ogqa_ c.10.2.8 (A:) Polygala  99.8 2.4E-21 1.7E-25  148.6   9.3  126  399-528     2-135 (313)
 65 d1ogqa_ c.10.2.8 (A:) Polygala  99.3 3.6E-13 2.6E-17   97.2   4.2   92  444-539   219-312 (313)
 66 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.3 7.2E-12 5.3E-16   89.0   8.5   99  431-529     8-113 (192)
 67 d2ifga3 c.10.2.7 (A:36-191) Hi  99.1 2.6E-10 1.9E-14   79.2   9.0  107  424-535     3-118 (156)
 68 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.0   3E-10 2.2E-14   78.9   7.1   90  444-535    52-141 (192)
 69 d1p9ag_ c.10.2.7 (G:) von Will  99.0 6.7E-10 4.9E-14   76.7   8.2   89  444-535   122-210 (266)
 70 d1p9ag_ c.10.2.7 (G:) von Will  98.9 1.9E-09 1.4E-13   73.8   8.3   97  434-533    13-115 (266)
 71 d1xkua_ c.10.2.7 (A:) Decorin   98.9 5.2E-09 3.8E-13   71.1  10.0   84  431-515    10-99  (305)
 72 d1ozna_ c.10.2.7 (A:) Reticulo  98.9 1.3E-09 9.5E-14   74.8   6.1   89  445-535   152-240 (284)
 73 d1dcea3 c.10.2.2 (A:444-567) R  98.7 1.7E-08 1.3E-12   67.8   7.4   82  445-531    19-101 (124)
 74 d1dcea3 c.10.2.2 (A:444-567) R  98.7 1.1E-08 7.8E-13   69.1   6.1   76  449-529     1-76  (124)
 75 d1a9na_ c.10.2.4 (A:) Spliceso  98.7 2.4E-08 1.8E-12   66.9   6.5   82  444-528    16-97  (162)
 76 d1ozna_ c.10.2.7 (A:) Reticulo  98.6 3.5E-08 2.5E-12   65.9   6.7   85  444-528   127-211 (284)
 77 d1j7la_ d.144.1.6 (A:) Type II  98.6 7.4E-07 5.4E-11   57.5  13.3  132  616-755    23-212 (263)
 78 d1xkua_ c.10.2.7 (A:) Decorin   98.6 4.2E-08 3.1E-12   65.3   6.6   86  445-534   194-286 (305)
 79 d2omza2 c.10.2.1 (A:33-416) In  98.6 2.7E-08   2E-12   66.6   5.2   76  445-526   306-381 (384)
 80 d2omza2 c.10.2.1 (A:33-416) In  98.4 6.2E-07 4.5E-11   58.0   7.3   74  447-526   286-359 (384)
 81 d1a9na_ c.10.2.4 (A:) Spliceso  98.3 2.3E-07 1.6E-11   60.8   4.4   82  445-532    40-124 (162)
 82 d1h6ua2 c.10.2.1 (A:36-262) In  98.3 4.3E-07 3.2E-11   59.0   5.6   77  444-526   149-225 (227)
 83 d1nd4a_ d.144.1.6 (A:) Aminogl  98.3 6.1E-06 4.5E-10   51.8  11.2  130  613-755    17-204 (255)
 84 d1xwdc1 c.10.2.7 (C:18-259) Fo  98.2   6E-07 4.4E-11   58.1   5.1   97  431-527     8-112 (242)
 85 d2ifga3 c.10.2.7 (A:36-191) Hi  98.2 1.7E-06 1.3E-10   55.2   6.5   79  450-530    12-92  (156)
 86 d1h6ta2 c.10.2.1 (A:31-240) In  98.1 4.7E-06 3.4E-10   52.5   7.0   73  447-525   135-207 (210)
 87 d1h6ta2 c.10.2.1 (A:31-240) In  98.1 4.4E-06 3.2E-10   52.7   6.6   71  448-524    48-118 (210)
 88 d2omxa2 c.10.2.1 (A:37-235) In  98.1 7.1E-06 5.2E-10   51.3   7.4   58  446-507   128-185 (199)
 89 d2pula1 d.144.1.6 (A:5-396) Me  97.9 0.00015 1.1E-08   43.0  12.0   76  612-689    32-118 (392)
 90 d1jl5a_ c.10.2.6 (A:) Leucine   97.9 1.2E-05 8.9E-10   49.9   6.3   62  444-514   282-343 (353)
 91 d2omxa2 c.10.2.1 (A:37-235) In  97.9 2.4E-05 1.7E-09   48.1   7.5   57  447-507    41-97  (199)
 92 d1jl5a_ c.10.2.6 (A:) Leucine   97.8   6E-05 4.3E-09   45.6   8.0   73  445-531   263-335 (353)
 93 d1m9la_ c.10.3.1 (A:) Outer ar  97.8   2E-07 1.5E-11   61.1  -4.9   79  445-528    47-125 (198)
 94 d1h6ua2 c.10.2.1 (A:36-262) In  97.7 7.1E-05 5.2E-09   45.1   7.0   72  447-524   130-201 (227)
 95 d1m9la_ c.10.3.1 (A:) Outer ar  97.5 3.2E-06 2.3E-10   53.5  -1.7   63  461-526    39-101 (198)
 96 d1xwdc1 c.10.2.7 (C:18-259) Fo  97.4 0.00013 9.5E-09   43.4   5.9   78  445-524   152-231 (242)
 97 d1zyla1 d.144.1.6 (A:4-328) Rd  97.4  0.0014   1E-07   37.0  11.2  157  597-756     7-220 (325)
 98 d1koha1 c.10.2.3 (A:201-362) m  97.2 1.1E-05   8E-10   50.2  -1.6   71  461-533    56-128 (162)
 99 d1nw1a_ d.144.1.8 (A:) Choline  97.2  0.0036 2.6E-07   34.4  11.0   73  612-690    48-129 (395)
100 d1z7xw1 c.10.1.1 (W:1-460) Rib  97.0 9.2E-05 6.7E-09   44.4   1.3   17  466-482    51-67  (460)
101 d2astb2 c.10.1.3 (B:2136-2419)  96.8 5.9E-05 4.3E-09   45.6  -0.9   84  444-527    44-130 (284)
102 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.8   0.011 8.2E-07   31.2  13.5  155  598-755     3-212 (316)
103 d2astb2 c.10.1.3 (B:2136-2419)  96.8  0.0005 3.6E-08   39.8   3.7   80  446-525   148-232 (284)
104 d1koha1 c.10.2.3 (A:201-362) m  96.7 2.4E-05 1.7E-09   48.0  -3.4   79  445-524    64-152 (162)
105 d1z7xw1 c.10.1.1 (W:1-460) Rib  96.4 0.00011 7.9E-09   43.9  -1.6   63  446-508    55-126 (460)
106 d2ca6a1 c.10.1.2 (A:2-345) Rna  96.1 0.00051 3.7E-08   39.7   0.5   81  446-526    31-129 (344)
107 d2ca6a1 c.10.1.2 (A:2-345) Rna  95.0  0.0018 1.3E-07   36.2  -0.1   17  466-482   211-227 (344)
108 d1pgva_ c.10.1.1 (A:) Tropomod  93.7  0.0099 7.2E-07   31.6   1.4   63  446-508    15-86  (167)
109 d1pgva_ c.10.1.1 (A:) Tropomod  93.5  0.0066 4.8E-07   32.7   0.1   62  446-507    44-113 (167)
110 d1io0a_ c.10.1.1 (A:) Tropomod  90.1   0.021 1.5E-06   29.5  -0.5   85  446-530    17-114 (166)
111 d1io0a_ c.10.1.1 (A:) Tropomod  77.6   0.093 6.8E-06   25.5  -1.9   82  446-527    46-141 (166)

No 1  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=363.81  Aligned_cols=269  Identities=24%  Similarity=0.424  Sum_probs=213.4

Q ss_pred             CCCHHHHHHHHHHH-----------CCEECEECCEEEEEEEECC-CC---EEEEEEEECCCCC-CCHHHHHHHHHHHHCC
Q ss_conf             44887999987533-----------1412020747999999769-98---9999995058998-9133368999987403
Q 002461          597 QFTYSEIVDITNNF-----------HRILGKGGFGTVYHGYLAD-GS---EVAIKMLSASSSQ-GPKQFRTEAQLLMRVH  660 (919)
Q Consensus       597 ~~~~~el~~~t~~f-----------~~~LG~G~fG~Vyka~~~~-g~---~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~  660 (919)
                      .++++++.+++.+|           .+.||+|+||+||+|.+.. ++   .||||.+...... ..+.|.+|+.+|++++
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   85 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD   85 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHCHHHCHHHCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             88879899999604622080042785698027882999999957997889999999784459899999999999998579


Q ss_pred             CCCEEEEEEEEECCCEEEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEE
Q ss_conf             76031687676339908999983468882344200123468967699999999999999881699993530364330785
Q 002461          661 HRNLASLVGYCNDGGNVGLVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILL  740 (919)
Q Consensus       661 H~NIv~l~g~~~~~~~~~LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILl  740 (919)
                      |||||+++|++...+..++||||+++|+|.+++... ...++|..++.++.|+++||.|||   +++++||||||+|||+
T Consensus        86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl  161 (299)
T d1jpaa_          86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILV  161 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred             CCCCCCEEEEEEECCEEEEEEEECCCCCCEEEECCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCEEEE
T ss_conf             988861899996288779999722798530021045-679999999999999999889885---2798357615044898


Q ss_pred             CCCCCEEEECCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCC
Q ss_conf             8898489960376423488878743---115545865337443247889941468999999999992-999753487862
Q 002461          741 NEKMQAKLADFGFSKIFPAESESHI---STSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNT  816 (919)
Q Consensus       741 d~~~~vkI~DFGla~~~~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~  816 (919)
                      +.++.+||+|||+++.+........   .....|+..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..
T Consensus       162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~-~~  240 (299)
T d1jpaa_         162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT-NQ  240 (299)
T ss_dssp             CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HH
T ss_pred             CCCCCEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-HH
T ss_conf             89991998884431575677776536502566688300387888369978612144535789999867999999999-99


Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             0001223322368742233620004899367999999999529899899999999999999977557
Q 002461          817 HIVNRVCPFLERGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEME  883 (919)
Q Consensus       817 ~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~~  883 (919)
                      .+...+..    +         .+...+.+....+.+++.+||+.+|++||+|.||++.|+++++..
T Consensus       241 ~~~~~i~~----~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p  294 (299)
T d1jpaa_         241 DVINAIEQ----D---------YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP  294 (299)
T ss_dssp             HHHHHHHT----T---------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHC----C---------CCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCH
T ss_conf             99999973----7---------889997422699999999975879768929999999999984186


No 2  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=365.70  Aligned_cols=265  Identities=26%  Similarity=0.413  Sum_probs=216.7

Q ss_pred             HHHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             7533141202074799999976-998999999505899891333689999874037603168767633990899998346
Q 002461          607 TNNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      .+.+.+.||+|+||+||+|.+. +++.||||+++.. ....++|.+|+.++++++||||++++|++.+.+..++|+||++
T Consensus        18 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~   96 (287)
T d1opja_          18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   96 (287)
T ss_dssp             GEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCC-CCHHHHHHHHHHHHHHCCCCCEECCCCCEEECCEEEEEEECCC
T ss_conf             939865982088808999999999969999997776-1039999999999986799988267752745785478763146


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858898489960376423488878743
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHI  765 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~  765 (919)
                      +|+|.+++.......+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+++..... ....
T Consensus        97 ~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~-~~~~  172 (287)
T d1opja_          97 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTA  172 (287)
T ss_dssp             TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS-SSEE
T ss_pred             CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCC-CCEE
T ss_conf             760677753035541579999999999999788898---789305760457689989992898324454653788-7221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             11554586533744324788994146899999999999299975348786200012233223687422336200048993
Q 002461          766 STSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDT  845 (919)
Q Consensus       766 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~  845 (919)
                      .....|+..|+|||++.+..++.++|||||||++|||++|+.|+..+.+...+.+.+..    +         .....+.
T Consensus       173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~----~---------~~~~~~~  239 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----D---------YRMERPE  239 (287)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT----T---------CCCCCCT
T ss_pred             ECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC----C---------CCCCCCC
T ss_conf             03556654666927872799981043021789999998679988774259999999855----8---------8888874


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             67999999999529899899999999999999977557879999
Q 002461          846 NSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEMETAREQI  889 (919)
Q Consensus       846 ~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~~~~~~~~  889 (919)
                      .....+.+++.+||..+|++||+|.|+++.|+.+.+.....+..
T Consensus       240 ~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~~~~~~i  283 (287)
T d1opja_         240 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV  283 (287)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSSSCHHHHH
T ss_pred             CCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf             33099999999975779768939999999999998757777475


No 3  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=361.59  Aligned_cols=254  Identities=27%  Similarity=0.471  Sum_probs=209.7

Q ss_pred             HHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCC
Q ss_conf             33141202074799999976998999999505899891333689999874037603168767633990899998346888
Q 002461          609 NFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAYGN  688 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~Gs  688 (919)
                      .+.+.||+|+||+||+|.+.+++.||||+++.. ....++|.+|+.++++++||||++++|+|...+..++|+||+++|+
T Consensus         8 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~   86 (263)
T d1sm2a_           8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC   86 (263)
T ss_dssp             EEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             EEEEEEEECCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCCC
T ss_conf             888898208882999999889999999998788-6768999999999996689975653524315993379998369991


Q ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             23442001234689676999999999999998816999935303643307858898489960376423488878743115
Q 002461          689 LKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHISTS  768 (919)
Q Consensus       689 L~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~~~  768 (919)
                      |.+++... ...+++..++.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++...... ......
T Consensus        87 L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~-~~~~~~  161 (263)
T d1sm2a_          87 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG  161 (263)
T ss_dssp             HHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC----------------
T ss_pred             HHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHH---CCCEEECCCCHHHEEECCCCCEEECCCCHHEECCCCC-CEEECC
T ss_conf             89975201-347889999999999999877653---1643104431532666688776865532100236887-335043


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             54586533744324788994146899999999999299975348786200012233223687422336200048993679
Q 002461          769 IVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDTNSV  848 (919)
Q Consensus       769 ~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~~~  848 (919)
                      ..|+..|+|||++.+..++.++|||||||++|||+|+..|+........+.+.+..    +.         +...+....
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~----~~---------~~~~p~~~~  228 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----GF---------RLYKPRLAS  228 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH----TC---------CCCCCTTSC
T ss_pred             EECCCCCCCHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH----CC---------CCCCCCCCC
T ss_conf             00176667857860799984033210599999998789888778999999999980----68---------889954367


Q ss_pred             HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             999999995298998999999999999999775
Q 002461          849 WKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       849 ~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                      ..+.+++.+||+.+|++||+|+||++.|+++.+
T Consensus       229 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             999999999765797689199999999999985


No 4  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=360.86  Aligned_cols=255  Identities=27%  Similarity=0.442  Sum_probs=209.1

Q ss_pred             HHHHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             75331412020747999999769989999995058998913336899998740376031687676339908999983468
Q 002461          607 TNNFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      .+.+.+.||+|+||+||+|.+++++.||||+++.. ....+.|.+|+.++++++||||++++|++.+ +..++||||+++
T Consensus        14 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~   91 (272)
T d1qpca_          14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMEN   91 (272)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred             HEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEECC-CCEEEEEEECCC
T ss_conf             93886798107982899999999999999998647-6888999999999986799988578731045-976999995789


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787431
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIS  766 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~  766 (919)
                      |+|.+++.......+++..+++++.|+++||.|||   +++++||||||+|||++.++.+||+|||+++.... ......
T Consensus        92 g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~-~~~~~~  167 (272)
T d1qpca_          92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAR  167 (272)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS-SCEECC
T ss_pred             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHEEEECCCCEEECCCCCEEECCC-CCCCCC
T ss_conf             82888875147898878899999999999999997---48954675642251562024404234101477358-864420


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             15545865337443247889941468999999999992999753487862000122332236874223362000489936
Q 002461          767 TSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDTN  846 (919)
Q Consensus       767 ~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~  846 (919)
                      ....|+..|+|||++.+..++.++|||||||++|||+||+.|+..........+.+..    +.         +...+..
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~----~~---------~~~~p~~  234 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----GY---------RMVRPDN  234 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----TC---------CCCCCTT
T ss_pred             CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH----CC---------CCCCCCC
T ss_conf             3567744445828983799982456452579999999689888888899999999970----68---------8889655


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             7999999999529899899999999999999977
Q 002461          847 SVWKVAETAMECVPSISFQRPTMSHVVTELKKCL  880 (919)
Q Consensus       847 ~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~  880 (919)
                      ....+.+++.+||+.+|++||||.+|+++|+++.
T Consensus       235 ~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf             7199999999975889768939999999861132


No 5  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=358.74  Aligned_cols=257  Identities=30%  Similarity=0.494  Sum_probs=204.4

Q ss_pred             HHCCEECEECCEEEEEEEECCCCEEEEEEEECCC--CCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             3314120207479999997699899999950589--98913336899998740376031687676339908999983468
Q 002461          609 NFHRILGKGGFGTVYHGYLADGSEVAIKMLSASS--SQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      .+.+.||+|+||+||+|.++  ..||||+++...  ....+.|.+|+.++++++||||++++|++.+ +..++|+||+++
T Consensus        11 ~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~   87 (276)
T d1uwha_          11 TVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEG   87 (276)
T ss_dssp             CCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCE
T ss_pred             EEEEEEEECCCCEEEEEEEC--CEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CEEEEEEECCCC
T ss_conf             99889830788589999999--989999997346998999999999999984799878645679715-589999965899


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787431
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIS  766 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~  766 (919)
                      |+|.+++... ...+++..++.++.|+++||+|||   +++|+||||||+|||++.++.+||+|||+++...........
T Consensus        88 g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~  163 (276)
T d1uwha_          88 SSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF  163 (276)
T ss_dssp             EEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----------
T ss_pred             CCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHH---CCCEECCCCCHHHEEECCCCCEEECCCCCEEECCCCCCCCCC
T ss_conf             8889998523-578999999999999999988875---099951614789979818997887500221333556776312


Q ss_pred             CCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             15545865337443247---889941468999999999992999753487862000122332236874223362000489
Q 002461          767 TSIVGTVGYLDPEYYAS---NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       767 ~~~~gt~~Y~APE~l~~---~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                      ....||+.|+|||++.+   ..++.++|||||||++|||+||+.||........+...+..    +.    ..+.+. ..
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~----~~----~~p~~~-~~  234 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GY----LSPDLS-KV  234 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH----TS----CCCCGG-GS
T ss_pred             CCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC----CC----CCCCCH-HC
T ss_conf             5665574317999995056899995315163599999999788998998969999999965----88----898600-03


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             93679999999995298998999999999999999775
Q 002461          844 DTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                      .......+.+++.+||..+|++||||.|+++.|+.+.+
T Consensus       235 ~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             65554999999999758897689299999999999997


No 6  
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=353.38  Aligned_cols=256  Identities=26%  Similarity=0.442  Sum_probs=206.7

Q ss_pred             HHHHCCEECEECCEEEEEEEECC-C-----CEEEEEEEECC-CCCCCHHHHHHHHHHHHC-CCCCEEEEEEEEECCCEEE
Q ss_conf             75331412020747999999769-9-----89999995058-998913336899998740-3760316876763399089
Q 002461          607 TNNFHRILGKGGFGTVYHGYLAD-G-----SEVAIKMLSAS-SSQGPKQFRTEAQLLMRV-HHRNLASLVGYCNDGGNVG  678 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~~-g-----~~VAVK~l~~~-~~~~~~~f~~Ei~~L~~l-~H~NIv~l~g~~~~~~~~~  678 (919)
                      ...+.+.||+|+||+||+|.... +     ..||+|.+... .......+.+|+.++.++ +|||||++++++.+.+..+
T Consensus        38 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~  117 (325)
T d1rjba_          38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY  117 (325)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEE
T ss_conf             93970198307881999999857885542049999996633587899999999999997158996868778886299589


Q ss_pred             EEEEECCCCCHHHHHHCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
Q ss_conf             9998346888234420012---------------------3468967699999999999999881699993530364330
Q 002461          679 LVYEYMAYGNLKQYLFDET---------------------KEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTAN  737 (919)
Q Consensus       679 LV~E~~~~GsL~~~L~~~~---------------------~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~N  737 (919)
                      +||||+++|+|.++++...                     ...+++..++.++.|+++||+|||   +++|+||||||+|
T Consensus       118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~N  194 (325)
T d1rjba_         118 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARN  194 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGG
T ss_pred             EEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCHHC
T ss_conf             9997279995999998625777510221000012220012577899999999999999999997---3990505270321


Q ss_pred             EEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCC
Q ss_conf             7858898489960376423488878743115545865337443247889941468999999999992-999753487862
Q 002461          738 ILLNEKMQAKLADFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNT  816 (919)
Q Consensus       738 ILld~~~~vkI~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~  816 (919)
                      ||++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus       195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHH
T ss_conf             44345982898514222204577861562343578765783887279999633030003999999838999999989899


Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             00012233223687422336200048993679999999995298998999999999999999
Q 002461          817 HIVNRVCPFLERGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKK  878 (919)
Q Consensus       817 ~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~  878 (919)
                      .+.+.+.    .+         .+...+......+.+++.+||+.+|++||||.||++.|..
T Consensus       275 ~~~~~~~----~~---------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         275 NFYKLIQ----NG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHH----TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHH----CC---------CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHC
T ss_conf             9999985----69---------9899887678999999999758896689399999999748


No 7  
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=350.44  Aligned_cols=258  Identities=26%  Similarity=0.415  Sum_probs=208.5

Q ss_pred             HHCCEECEECCEEEEEEEECCC-----CEEEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEE
Q ss_conf             3314120207479999997699-----89999995058998-91333689999874037603168767633990899998
Q 002461          609 NFHRILGKGGFGTVYHGYLADG-----SEVAIKMLSASSSQ-GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYE  682 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g-----~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E  682 (919)
                      ...++||+|+||+||+|.++..     ..||||+++..... ...+|.+|+.++++++||||++++|++.+....++|+|
T Consensus        10 ~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e   89 (283)
T d1mqba_          10 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE   89 (283)
T ss_dssp             EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEE
T ss_conf             86159811779099999996899878799999998844596899999999999985689878323677833880389997


Q ss_pred             ECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             34688823442001234689676999999999999998816999935303643307858898489960376423488878
Q 002461          683 YMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESE  762 (919)
Q Consensus       683 ~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~  762 (919)
                      |+.+|++.+.+.. ....++|..++.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.+.....
T Consensus        90 ~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          90 YMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             CCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             ECCCCCCHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCC
T ss_conf             2135740222102-3454208999999999998541212---12342576564427888998499845510300357876


Q ss_pred             -CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -7431155458653374432478899414689999999999929997534878620001223322368742233620004
Q 002461          763 -SHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEA  841 (919)
Q Consensus       763 -~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~  841 (919)
                       ........||..|+|||++.+..++.++|||||||++|||++|..|+........+.+.+..-             .+.
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-------------~~~  232 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-------------FRL  232 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-------------CCC
T ss_pred             CCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC-------------CCC
T ss_conf             5267426777734348888704999973556344898999996798865568999999998635-------------789


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             899367999999999529899899999999999999977557
Q 002461          842 NFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEME  883 (919)
Q Consensus       842 ~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~~  883 (919)
                      ..+......+.+++.+||..+|++||+|.||+++|+.+++..
T Consensus       233 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         233 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCC
T ss_conf             985045799999999977679768939999999999986695


No 8  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=348.12  Aligned_cols=250  Identities=22%  Similarity=0.316  Sum_probs=202.3

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCC-CCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             533141202074799999976-998999999505899-891333689999874037603168767633990899998346
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      +++.+.||+|+||+||+|... +|+.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf             08998972174809999999999979999998456641279999999999985799888469654046743679886458


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858898489960376423488878743
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHI  765 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~  765 (919)
                      +|+|.+++.  ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus        87 gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          87 GGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             TEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             CCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCCCC
T ss_conf             980899975--3799999999999999999999999---75983575468997887899879832314224046886531


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             115545865337443247889-9414689999999999929997534878620001223322368742233620004899
Q 002461          766 STSIVGTVGYLDPEYYASNRL-TEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFD  844 (919)
Q Consensus       766 ~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~  844 (919)
                      .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||....+..........   ....         ....
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~---~~~~---------~~~~  229 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTY---------LNPW  229 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHT---TCTT---------STTG
T ss_pred             CCCEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC---CCCC---------CCCC
T ss_conf             113255747428728618999997101617379999998299788889859999999863---8887---------8864


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             367999999999529899899999999999
Q 002461          845 TNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       845 ~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      ......+.+++.+|++.+|++||++.|+++
T Consensus       230 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         230 KKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             469999999999976799668909999961


No 9  
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=349.09  Aligned_cols=255  Identities=28%  Similarity=0.431  Sum_probs=210.8

Q ss_pred             HHHHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             75331412020747999999769989999995058998913336899998740376031687676339908999983468
Q 002461          607 TNNFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      .+.+.+.||+|+||+||+|.+++++.||||+++.. ....+.|.+|+.++++++|+|||+++|++.+ +..++|+||+++
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~   95 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK   95 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             HEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CCEEEEEEECCC
T ss_conf             97984699307980999999999999999998804-4888999999999986666788689999823-975999994479


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787431
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIS  766 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~  766 (919)
                      |+|.+++.......++|..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++.... ......
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~-~~~~~~  171 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTAR  171 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH---HHHEECCCCCCEEEEECCCCCEEECCCCHHHHCCC-CCCEEE
T ss_conf             94354200003553059999999999999999875---41143353123079998999299844255542568-873352


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             15545865337443247889941468999999999992999753487862000122332236874223362000489936
Q 002461          767 TSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDTN  846 (919)
Q Consensus       767 ~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~  846 (919)
                      ....|+..|+|||++....++.++||||||+++|||++|+.|+............+....             ....+..
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~-------------~~~~~~~  238 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPE  238 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------------CCCCCTT
T ss_pred             CCCCCCCCCCCHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC-------------CCCCCCC
T ss_conf             454556654580898379989177413235899999868999998888999999998268-------------9999832


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             7999999999529899899999999999999977
Q 002461          847 SVWKVAETAMECVPSISFQRPTMSHVVTELKKCL  880 (919)
Q Consensus       847 ~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~  880 (919)
                      ....+.+++.+||+.+|++||+|.+|+++|++..
T Consensus       239 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf             3799999999975669758919999999876662


No 10 
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=344.34  Aligned_cols=247  Identities=24%  Similarity=0.363  Sum_probs=202.7

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             53314120207479999997-69989999995058998913336899998740376031687676339908999983468
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      +.+.+.||+|+||+||+|.. .+|+.||+|+++.......+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g  101 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             CEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEECCC
T ss_conf             38878981285829999999899989999998430172799999999999867999880585779889998999970379


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787431
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIS  766 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~  766 (919)
                      |+|.+++..   ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+....  ...
T Consensus       102 g~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~--~~~  173 (293)
T d1yhwa1         102 GSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKR  173 (293)
T ss_dssp             CBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--CCB
T ss_pred             CCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCC--CCC
T ss_conf             808988641---59999999999999999999999---8797226776888688789968642515641321366--644


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             15545865337443247889941468999999999992999753487862000122332236874223362000489936
Q 002461          767 TSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDTN  846 (919)
Q Consensus       767 ~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~  846 (919)
                      ....||+.|+|||++.+..++.++||||+||++|||++|+.||........+...    ...+.. .     +  ..+..
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~~~~~~-~-----~--~~~~~  241 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI----ATNGTP-E-----L--QNPEK  241 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHHCSC-C-----C--SSGGG
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHH----HHCCCC-C-----C--CCCCC
T ss_conf             4444477736826644799880120313729999980488998997999999999----857999-8-----8--88553


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             7999999999529899899999999999
Q 002461          847 SVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       847 ~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      ....+.+++.+|+..+|++||++.|+++
T Consensus       242 ~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             7999999999986699668909999964


No 11 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=345.09  Aligned_cols=250  Identities=27%  Similarity=0.442  Sum_probs=207.0

Q ss_pred             HHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCC
Q ss_conf             33141202074799999976998999999505899891333689999874037603168767633990899998346888
Q 002461          609 NFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAYGN  688 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~Gs  688 (919)
                      .+.+.||+|+||+||+|+++++..||||+++... ...++|.+|+..+++++||||++++|+|.+.+..++|+||+++|+
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~   85 (258)
T d1k2pa_           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC   85 (258)
T ss_dssp             CCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEE
T ss_pred             EEEEEEECCCCEEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCC
T ss_conf             9968982078839999998899899999987475-778999999999996689860158899850781699997048993


Q ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             23442001234689676999999999999998816999935303643307858898489960376423488878743115
Q 002461          689 LKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHISTS  768 (919)
Q Consensus       689 L~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~~~  768 (919)
                      |.+++... ...+++..+.+++.|+++||.|||   +.+++||||||+|||++.++.+||+|||+++..... .......
T Consensus        86 l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~  160 (258)
T d1k2pa_          86 LLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVG  160 (258)
T ss_dssp             HHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS-SCCCCCC
T ss_pred             HHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCEEEEECCCCCEEECCCHHHEECCCC-CCEEECC
T ss_conf             88864102-467768999999999999999875---468434665413588769984798861442023578-7225246


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             545865337443247889941468999999999992-9997534878620001223322368742233620004899367
Q 002461          769 IVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDTNS  847 (919)
Q Consensus       769 ~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~~  847 (919)
                      ..|+..|+|||.+.+..++.++||||||+++|||+| |+.||.... ...+...+.    .+.         +...+...
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~-~~~~~~~i~----~~~---------~~~~p~~~  226 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIA----QGL---------RLYRPHLA  226 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-HHHHHHHHH----TTC---------CCCCCTTC
T ss_pred             CCCCCCCCCCHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCC-HHHHHHHHH----HCC---------CCCCCCCC
T ss_conf             5788775780786379988521033643246739755999988999-999999998----079---------78996546


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             9999999995298998999999999999999
Q 002461          848 VWKVAETAMECVPSISFQRPTMSHVVTELKK  878 (919)
Q Consensus       848 ~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~  878 (919)
                      ...+.+++.+||+.+|++||++.++++.|.+
T Consensus       227 ~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         227 SEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CHHHHHHHHHHCCCCHHHCCCHHHHHHHHHC
T ss_conf             5999999999766897689399999987418


No 12 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=345.11  Aligned_cols=249  Identities=25%  Similarity=0.421  Sum_probs=200.1

Q ss_pred             CEECEECCEEEEEEEECC---CCEEEEEEEECCCCC--CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             412020747999999769---989999995058998--913336899998740376031687676339908999983468
Q 002461          612 RILGKGGFGTVYHGYLAD---GSEVAIKMLSASSSQ--GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       612 ~~LG~G~fG~Vyka~~~~---g~~VAVK~l~~~~~~--~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      +.||+|+||+||+|.+++   ++.||||+++.....  ..++|.+|+.++++++||||++++|+|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCEEEEEECCCC
T ss_conf             7834587829999998169738599999988010898999999999999986799898527777505-977999974788


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC-CC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787-43
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES-HI  765 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~-~~  765 (919)
                      |+|.+++.  ....+++..++.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.+...... ..
T Consensus        92 g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf             96899975--2257899999999999999976687---479556777611310235675123413453313432344322


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             115545865337443247889941468999999999992-9997534878620001223322368742233620004899
Q 002461          766 STSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFD  844 (919)
Q Consensus       766 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~  844 (919)
                      .....||+.|+|||.+.+..++.++|||||||++|||++ |+.||.... ...+...+    ..+.         +...+
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~-~~~~~~~i----~~~~---------~~~~p  232 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAML----EKGE---------RMGCP  232 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHH----HTTC---------CCCCC
T ss_pred             CCCCCCCCEECCCHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC-HHHHHHHH----HCCC---------CCCCC
T ss_conf             4456778420391665379998434430340313289658999999989-99999999----8289---------99998


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             367999999999529899899999999999999977
Q 002461          845 TNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCL  880 (919)
Q Consensus       845 ~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~  880 (919)
                      ......+.+++.+||..+|++||+|.+|+++|+...
T Consensus       233 ~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHH
T ss_conf             656799999999975889768909899999852887


No 13 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=345.65  Aligned_cols=252  Identities=23%  Similarity=0.416  Sum_probs=201.9

Q ss_pred             CC-EECEECCEEEEEEEEC---CCCEEEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             14-1202074799999976---9989999995058998-91333689999874037603168767633990899998346
Q 002461          611 HR-ILGKGGFGTVYHGYLA---DGSEVAIKMLSASSSQ-GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       611 ~~-~LG~G~fG~Vyka~~~---~g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      .+ .||+|+||+||+|.++   ++..||||+++..... ..++|.+|+.++++++||||++++|++.. +..++||||++
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~   91 (285)
T d1u59a_          13 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAG   91 (285)
T ss_dssp             EEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC-CEEEEEEEECC
T ss_conf             78487306080999999960897689999998820397899999999999986799888068656036-80799998078


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC-C
Q ss_conf             888234420012346896769999999999999988169999353036433078588984899603764234888787-4
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES-H  764 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~-~  764 (919)
                      +|+|.+++.. .+..+++..+..++.|++.||.|||   +++++||||||+|||++.++.+||+|||+++.+...... .
T Consensus        92 ~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~  167 (285)
T d1u59a_          92 GGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  167 (285)
T ss_dssp             TEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred             CCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEECCCCCEEECCCHHHHCCCCCCCCCC
T ss_conf             9968997521-2569999999999999999878998---68810576764660454688542033134211554343211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3115545865337443247889941468999999999992-999753487862000122332236874223362000489
Q 002461          765 ISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       765 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                      ......|+..|+|||++.+..++.++|||||||++|||+| |+.||.... ...+...+    ..+..         ...
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-~~~~~~~i----~~~~~---------~~~  233 (285)
T d1u59a_         168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GPEVMAFI----EQGKR---------MEC  233 (285)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-THHHHHHH----HTTCC---------CCC
T ss_pred             CCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCC-HHHHHHHH----HCCCC---------CCC
T ss_conf             35621137433586887279999541232201789999938999999979-99999999----81899---------999


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             93679999999995298998999999999999999775
Q 002461          844 DTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                      +......+.+++.+||..+|++||+|.+|++.|+.+..
T Consensus       234 p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         234 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             97678999999999757797689099999999999999


No 14 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=346.20  Aligned_cols=258  Identities=29%  Similarity=0.474  Sum_probs=209.3

Q ss_pred             HHHCCEECEECCEEEEEEEEC------CCCEEEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEE
Q ss_conf             533141202074799999976------9989999995058998-913336899998740376031687676339908999
Q 002461          608 NNFHRILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLV  680 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV  680 (919)
                      .++.+.||+|+||+||+|++.      +++.||||+++..... ..++|.+|++++++++|+||++++++|......+++
T Consensus        15 ~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v   94 (301)
T d1lufa_          15 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL   94 (301)
T ss_dssp             CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE
T ss_conf             38867982078839999998887657788299999988210857999999999999966899765524666059803899


Q ss_pred             EEECCCCCHHHHHHCCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEE
Q ss_conf             98346888234420012----------------------34689676999999999999998816999935303643307
Q 002461          681 YEYMAYGNLKQYLFDET----------------------KEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANI  738 (919)
Q Consensus       681 ~E~~~~GsL~~~L~~~~----------------------~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NI  738 (919)
                      +|++++|+|.+++....                      ...+++..++.++.|++.||+|||   +++++||||||+||
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivHrDlKp~NI  171 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNC  171 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred             EEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCCCE
T ss_conf             981589929999985275542100001110012103467889899999999999999855413---57868548840116


Q ss_pred             EECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             85889848996037642348887874311554586533744324788994146899999999999299975348786200
Q 002461          739 LLNEKMQAKLADFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHI  818 (919)
Q Consensus       739 Lld~~~~vkI~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~l  818 (919)
                      |++.++.+||+|||+++.+.............|+..|+|||.+.+..++.++|||||||++|||++|..|+..+.+....
T Consensus       172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~  251 (301)
T d1lufa_         172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV  251 (301)
T ss_dssp             EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             EECCCCCEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf             89899928983314421136776411157777676767989972688980563025236299998068999999899999


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             012233223687422336200048993679999999995298998999999999999999775
Q 002461          819 VNRVCPFLERGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       819 v~~v~~~~~~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                      ...+.    .+....         .+......+.+++.+||+.+|++||+|.||+++|+++.+
T Consensus       252 ~~~v~----~~~~~~---------~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         252 IYYVR----DGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHHHH----TTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHH----CCCCCC---------CCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCC
T ss_conf             99997----399788---------873252999999999748896579399999999998429


No 15 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=341.04  Aligned_cols=257  Identities=28%  Similarity=0.452  Sum_probs=205.8

Q ss_pred             HHHCCEECEECCEEEEEEEECCC----CEEEEEEEECCCC-CCCHHHHHHHHHHHHCCCCCEEEEEEEEEC-CCEEEEEE
Q ss_conf             53314120207479999997699----8999999505899-891333689999874037603168767633-99089999
Q 002461          608 NNFHRILGKGGFGTVYHGYLADG----SEVAIKMLSASSS-QGPKQFRTEAQLLMRVHHRNLASLVGYCND-GGNVGLVY  681 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~~g----~~VAVK~l~~~~~-~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~-~~~~~LV~  681 (919)
                      .+|.++||+|+||+||+|.+.++    ..||||+++.... ...++|.+|++++++++||||++++|++.. ++..++|+
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             ECCCEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEE
T ss_conf             52666981368809999999779987999999998843697899999999999986789998678678980699438999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             83468882344200123468967699999999999999881699993530364330785889848996037642348887
Q 002461          682 EYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAES  761 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~  761 (919)
                      ||+++|+|.+++.. ....+++..+++++.|++.||.|||   +.+++||||||+|||+++++.+||+|||+++......
T Consensus       109 E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         109 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             ECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             EEEECCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCHHHEEECCCCCEEEECCCCHHHCCCCC
T ss_conf             87406741442101-3454048999999999887652003---3676257766875767799988991065232255665


Q ss_pred             CC--CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             87--4311554586533744324788994146899999999999299975348786200012233223687422336200
Q 002461          762 ES--HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRL  839 (919)
Q Consensus       762 ~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l  839 (919)
                      ..  .......|+..|+|||.+.+..++.++||||||+++|||++|+.|+.......+...++.    .+.-.       
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~----~g~~~-------  253 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL----QGRRL-------  253 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHH----TTCCC-------
T ss_pred             CCCCEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH----CCCCC-------
T ss_conf             5531002565556455676887437999745746619999999978999988899999999998----08988-------


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             048993679999999995298998999999999999999775
Q 002461          840 EANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       840 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                        ..+......+.+++.+||..+|++||+|.||++.|+.+++
T Consensus       254 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         254 --LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             --9964475999999999768897689399999999999997


No 16 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=341.54  Aligned_cols=249  Identities=23%  Similarity=0.318  Sum_probs=201.0

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             533141202074799999976-9989999995058998913336899998740376031687676339908999983468
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      +++.+.||+|+||+||+|... ++..||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEECCCC
T ss_conf             59847993077819999999999939999998728999999999999999867999988498898009958999962799


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787431
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIS  766 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~  766 (919)
                      |+|.+++... ...+++..+..++.|++.||.|||   +++|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        94 g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--~~~~  167 (288)
T d2jfla1          94 GAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRR  167 (288)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH--HHHH
T ss_pred             CCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEEECCHHHEEECCCCCEEEEECHHHHCCCCC--CCCC
T ss_conf             8188999862-899999999999999999999999---889887140700314878999899716123035778--6410


Q ss_pred             CCCCCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1554586533744324-----78899414689999999999929997534878620001223322368742233620004
Q 002461          767 TSIVGTVGYLDPEYYA-----SNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEA  841 (919)
Q Consensus       767 ~~~~gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~  841 (919)
                      ....||+.|+|||++.     ...++.++|||||||++|||++|+.||........+....     .+....+.      
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~-----~~~~~~~~------  236 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA-----KSEPPTLA------  236 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH-----HSCCCCCS------
T ss_pred             CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-----CCCCCCCC------
T ss_conf             0102562647999983202578888806657878999999820889999989999999997-----07998777------


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             899367999999999529899899999999999
Q 002461          842 NFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       842 ~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                       .+......+.+++.+||+.+|++|||+.|+++
T Consensus       237 -~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         237 -QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             -SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             -65669999999999976699668919999962


No 17 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=340.78  Aligned_cols=255  Identities=27%  Similarity=0.437  Sum_probs=204.0

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCC----EEEEEEEECC-CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEE
Q ss_conf             533141202074799999976-998----9999995058-9989133368999987403760316876763399089999
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGS----EVAIKMLSAS-SSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVY  681 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~----~VAVK~l~~~-~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~  681 (919)
                      +.+.+.||+|+||+||+|.+. +|+    .||+|+++.. .....++|.+|+.++++++||||++++|+|.+. ..++++
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~   89 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIT   89 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC-CEEEEE
T ss_conf             9783198208992999999958998898999999965134979999999999999867998881589999619-836999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             83468882344200123468967699999999999999881699993530364330785889848996037642348887
Q 002461          682 EYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAES  761 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~  761 (919)
                      |++.+|+|.+++... ...+++..+++++.|++.||.|||   +++++||||||+|||++.++.+||+|||+++......
T Consensus        90 e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          90 QLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             ECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EECCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCHHHCCEECCCCCEEEECCCCCEECCCCC
T ss_conf             842687401011133-457999999999999999999998---7695047621203116799875860255222335444


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8743115545865337443247889941468999999999992-999753487862000122332236874223362000
Q 002461          762 ESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLE  840 (919)
Q Consensus       762 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~  840 (919)
                      .........||..|+|||++.++.++.++|||||||++|||+| |++||.. .....+...+    ..+         .+
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~-~~~~~~~~~i----~~~---------~~  231 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASEISSIL----EKG---------ER  231 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-SCGGGHHHHH----HHT---------CC
T ss_pred             CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHH----HCC---------CC
T ss_conf             532236510586446708874699983565440799999999779999999-9989999999----759---------98


Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             48993679999999995298998999999999999999775
Q 002461          841 ANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       841 ~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                      ...+......+.+++.+||..+|++||+|.|+++.|+.+..
T Consensus       232 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             99985568999999998478993469199999999999875


No 18 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=347.82  Aligned_cols=263  Identities=23%  Similarity=0.327  Sum_probs=202.8

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             53314120207479999997-69989999995058998-91333689999874037603168767633990899998346
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ-GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      +...+.||+|+||+||+|.. .+|+.||+|+++..... ....+.+|+.+++.++||||+++++++.+.++.++||||++
T Consensus         8 y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~   87 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD   87 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCC
T ss_conf             88978971277809999999899969999998754097899999999999986799999949999998999999997679


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858898489960376423488878743
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHI  765 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~  765 (919)
                      +|+|.+++..  ...+++..+..++.|++.||.|||+  +.+|+||||||+|||++.++.+||+|||+|+.+..    ..
T Consensus        88 gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~----~~  159 (322)
T d1s9ja_          88 GGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SM  159 (322)
T ss_dssp             TEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----HT
T ss_pred             CCCHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHH--HCCEECCCCCHHHEEECCCCCEEEEECCCCCCCCC----CC
T ss_conf             9868998742--4999999999999999999999998--59997144577994687899899954877625678----86


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC---------------
Q ss_conf             11554586533744324788994146899999999999299975348786200012233223687---------------
Q 002461          766 STSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGD---------------  830 (919)
Q Consensus       766 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~---------------  830 (919)
                      .....||..|+|||++.+..++.++||||+||++|||++|+.||.....................               
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS  239 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------
T ss_pred             CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             21113771411946875899894888998999999999888998998878999999887517754577421233322111


Q ss_pred             ----------CCCCCCCCCC---CCCC-HHHHHHHHHHHHHCCCCCCCCCCCHHHHHH--HHHH
Q ss_conf             ----------4223362000---4899-367999999999529899899999999999--9999
Q 002461          831 ----------VRSIVDPRLE---ANFD-TNSVWKVAETAMECVPSISFQRPTMSHVVT--ELKK  878 (919)
Q Consensus       831 ----------l~~iiD~~l~---~~~~-~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~--~Le~  878 (919)
                                ..+..+....   ...+ ......+.+++.+|+..+|++|||+.|+++  .+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             ------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHCHHHCC
T ss_conf             1222354134778876650268766764448999999999986899467908999960986476


No 19 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=338.02  Aligned_cols=246  Identities=28%  Similarity=0.458  Sum_probs=193.7

Q ss_pred             HHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCC--CCCHHHHHHHHHHHHCCCCCEEEEEEEEEC----CCEEEEEE
Q ss_conf             33141202074799999976-998999999505899--891333689999874037603168767633----99089999
Q 002461          609 NFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEAQLLMRVHHRNLASLVGYCND----GGNVGLVY  681 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~--~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~----~~~~~LV~  681 (919)
                      .|.+.||+|+||+||+|... ++..||+|++.....  ...+.+.+|++++++++||||+++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEEE
T ss_conf             85169700828499999999999599999985122798999999999999985799985069999840334588899999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEC-CCCCEEEECCCCCCCCCCC
Q ss_conf             834688823442001234689676999999999999998816999935303643307858-8984899603764234888
Q 002461          682 EYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLN-EKMQAKLADFGFSKIFPAE  760 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld-~~~~vkI~DFGla~~~~~~  760 (919)
                      ||+++|+|.+++..  ...+++..+..++.|+++||+|||+. ..+|+||||||+|||++ +++.+||+|||+++.... 
T Consensus        92 E~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~-  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  167 (270)
T ss_dssp             ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             ECCCCCCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCHHHCEEECCCCCEEEEECCCCEECCC-
T ss_conf             57898948999751--35546999999999999999999978-997996876743511667999889800576542368-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78743115545865337443247889941468999999999992999753487862000122332236874223362000
Q 002461          761 SESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLE  840 (919)
Q Consensus       761 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~  840 (919)
                         .......||+.|+|||++.+ .++.++|||||||++|||++|+.||....+...+.+.+..    +...    +.+.
T Consensus       168 ---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~----~~~~----~~~~  235 (270)
T d1t4ha_         168 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS----GVKP----ASFD  235 (270)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT----TCCC----GGGG
T ss_pred             ---CCCCCCCCCCCCCCHHHHCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC----CCCC----CCCC
T ss_conf             ---76677553813008988478-9998671100799999998788999876559999999973----8998----6567


Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             4899367999999999529899899999999999
Q 002461          841 ANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       841 ~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                          ......+.+++.+|+..+|++|||+.|+++
T Consensus       236 ----~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         236 ----KVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             ----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             ----557899999999976379758929999967


No 20 
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=339.24  Aligned_cols=243  Identities=28%  Similarity=0.429  Sum_probs=200.7

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECC---CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             533141202074799999976-9989999995058---998913336899998740376031687676339908999983
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~---~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      +.+.+.||+|+||+||+|... +++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEE
T ss_conf             69988985177858999999899949999998168856768999999999999856888888599999989998999850


Q ss_pred             CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             46888234420012346896769999999999999988169999353036433078588984899603764234888787
Q 002461          684 MAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       684 ~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +++|+|.+++..  ...+++..+..++.|++.||+|||   +++++||||||+|||++.++.+||+|||+++.....   
T Consensus        88 ~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~---  159 (263)
T d2j4za1          88 APLGTVYRELQK--LSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---  159 (263)
T ss_dssp             CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC---
T ss_pred             CCCCCHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEEEECCCCCEECCCCCEEECCCCEEEECCCC---
T ss_conf             479858988750--489999999999999999999999---889465220234414668998711555633544888---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247889941468999999999992999753487862000122332236874223362000489
Q 002461          764 HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                       ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.    .+..          .+
T Consensus       160 -~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~----~~~~----------~~  223 (263)
T d2j4za1         160 -RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS----RVEF----------TF  223 (263)
T ss_dssp             -CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHH----TTCC----------CC
T ss_pred             -CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHH----CCCC----------CC
T ss_conf             -5235578876349999758998931440467599999832999988899-999999997----1899----------99


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             9367999999999529899899999999999
Q 002461          844 DTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      +......+.+++.+|+..+|++|||+.|+++
T Consensus       224 p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         224 PDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             8668999999999976479768909999971


No 21 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=337.99  Aligned_cols=254  Identities=28%  Similarity=0.461  Sum_probs=206.1

Q ss_pred             HHCCEECEECCEEEEEEEECC-CC--EEEEEEEECCC-CCCCHHHHHHHHHHHHC-CCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             331412020747999999769-98--99999950589-98913336899998740-376031687676339908999983
Q 002461          609 NFHRILGKGGFGTVYHGYLAD-GS--EVAIKMLSASS-SQGPKQFRTEAQLLMRV-HHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~-g~--~VAVK~l~~~~-~~~~~~f~~Ei~~L~~l-~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      ++.+.||+|+||+||+|.+.+ +.  .||||+++... ....+.|.+|++++.++ +||||++++|++...+..++|+||
T Consensus        13 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey   92 (309)
T d1fvra_          13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   92 (309)
T ss_dssp             EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             EEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEE
T ss_conf             88779820788289999998999699999999782338579999999999998622899883678888418736999980


Q ss_pred             CCCCCHHHHHHCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEE
Q ss_conf             4688823442001--------------23468967699999999999999881699993530364330785889848996
Q 002461          684 MAYGNLKQYLFDE--------------TKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLA  749 (919)
Q Consensus       684 ~~~GsL~~~L~~~--------------~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~  749 (919)
                      +++|+|.++++..              ....+++..++.++.|++.||.|||   +++++||||||+|||++.++.+||+
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             CCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEEECCCCCEEEC
T ss_conf             2898699998640355555123101234578999999999999999987663---0895455505204898688763874


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCC
Q ss_conf             03764234888787431155458653374432478899414689999999999929997534878620001223322368
Q 002461          750 DFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERG  829 (919)
Q Consensus       750 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~  829 (919)
                      |||+++.....   .......|+..|+|||.+....++.++||||||+++|||++|..|+..+.+...+.+.+.+-.   
T Consensus       170 DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~---  243 (309)
T d1fvra_         170 DFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---  243 (309)
T ss_dssp             CTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC---
T ss_pred             CCCCCCCCCCC---CCCCCEECCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC---
T ss_conf             34432244422---345530137755553875269999622153138899999836899999999999999998268---


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             7422336200048993679999999995298998999999999999999775
Q 002461          830 DVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       830 ~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                                +...+......+.+++.+||+.+|++||+|.||++.|+.+++
T Consensus       244 ----------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         244 ----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             ----------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             ----------888876678999999999767896689499999999999986


No 22 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=0  Score=338.39  Aligned_cols=250  Identities=22%  Similarity=0.320  Sum_probs=201.6

Q ss_pred             HHHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             753314120207479999997-6998999999505899891333689999874037603168767633990899998346
Q 002461          607 TNNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      .+.+.+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCC
T ss_conf             75898898407681999999889998999999845243169999999999986799799929999998999999998579


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECC--CCCEEEECCCCCCCCCCCCCC
Q ss_conf             888234420012346896769999999999999988169999353036433078588--984899603764234888787
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNE--KMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~--~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +|+|.+++... ...+++..+..++.|++.||.|||   +.+++||||||+|||++.  ++.+||+|||+++.+...   
T Consensus       107 gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~---  179 (350)
T d1koaa2         107 GGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---  179 (350)
T ss_dssp             SCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT---
T ss_pred             CCCHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCEEEEECHHHEEECCCCCCEEEEEECCHHEECCCC---
T ss_conf             98899999762-378999999999999999999997---56976000154673641688986999545210442565---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247889941468999999999992999753487862000122332236874223362000489
Q 002461          764 HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                      .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+..    ....  .+....   
T Consensus       180 ~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~----~~~~--~~~~~~---  249 (350)
T d1koaa2         180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-DDETLRNVKS----CDWN--MDDSAF---  249 (350)
T ss_dssp             SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHH----TCCC--SCCGGG---
T ss_pred             CCCCEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHH----CCCC--CCCCCC---
T ss_conf             43200068624218899758998726765546599999985989989979-9999999984----7889--894223---


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             9367999999999529899899999999999
Q 002461          844 DTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                       ......+.+++.+|+..+|++|||+.|+++
T Consensus       250 -~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         250 -SGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             -GGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -CCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             -589999999999975689667908999862


No 23 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=337.65  Aligned_cols=249  Identities=29%  Similarity=0.447  Sum_probs=205.4

Q ss_pred             HHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC-CCEEEEEEEECCCC
Q ss_conf             33141202074799999976998999999505899891333689999874037603168767633-99089999834688
Q 002461          609 NFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCND-GGNVGLVYEYMAYG  687 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~-~~~~~LV~E~~~~G  687 (919)
                      .+.+.||+|+||.||+|.++ |+.||||+++..  ...+.+.+|+.++++++||||++++|+|.+ .+..++|+||+++|
T Consensus        10 ~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_          10 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             EEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             EEEEEEECCCCEEEEEEEEC-CEEEEEEEECCH--HHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCC
T ss_conf             88579820798089999999-909999998857--779999999999986789898549878872389289999636999


Q ss_pred             CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             82344200123468967699999999999999881699993530364330785889848996037642348887874311
Q 002461          688 NLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIST  767 (919)
Q Consensus       688 sL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~~  767 (919)
                      +|.+++.......++|..+++++.|++.||.|||   +.+++||||||+|||++.++.+|++|||+++.....     ..
T Consensus        87 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~-----~~  158 (262)
T d1byga_          87 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QD  158 (262)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred             CHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC---CCCEECCCCCHHHHEECCCCCEEECCCCCCEECCCC-----CC
T ss_conf             8999987457888899999999999985232113---376553666567601468997763245600344787-----76


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             5545865337443247889941468999999999992-999753487862000122332236874223362000489936
Q 002461          768 SIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFDTN  846 (919)
Q Consensus       768 ~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~~~  846 (919)
                      ...++..|+|||++.+..++.++||||||+++|||+| |++|+.. .+..++..++..    +.         +...+..
T Consensus       159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~-~~~~~~~~~i~~----~~---------~~~~~~~  224 (262)
T d1byga_         159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRVEK----GY---------KMDAPDG  224 (262)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT-SCGGGHHHHHTT----TC---------CCCCCTT
T ss_pred             CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHC----CC---------CCCCCCC
T ss_conf             556664677817872798885887775799999999789999999-999999999980----89---------9999765


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             799999999952989989999999999999997755
Q 002461          847 SVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEM  882 (919)
Q Consensus       847 ~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~  882 (919)
                      ....+.+++.+||..+|.+||+|.+++++|+.++..
T Consensus       225 ~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         225 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf             799999999997566976893999999999999867


No 24 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=340.16  Aligned_cols=247  Identities=27%  Similarity=0.401  Sum_probs=204.1

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECC---CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             53314120207479999997-69989999995058---998913336899998740376031687676339908999983
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSAS---SSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~---~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      +.+.+.||+|+||+||+|.. .+++.||||+++..   .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy   89 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY   89 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEC
T ss_conf             78988985087909999999899979999998657755777899999999999876888861799999989988999970


Q ss_pred             CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             46888234420012346896769999999999999988169999353036433078588984899603764234888787
Q 002461          684 MAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       684 ~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +++|+|.+++.  ..+.+++.....++.|++.||.|||   +.+|+||||||+|||+++++.+||+|||+++.+......
T Consensus        90 ~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          90 AKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             CCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHC---CCCEECCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCC
T ss_conf             48987777653--1599999999999999999997621---650884767741236688853886032102422567764


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247889941468999999999992999753487862000122332236874223362000489
Q 002461          764 HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                      .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+.    .+..          .+
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-~~~~~~i~----~~~~----------~~  229 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-YLIFQKII----KLEY----------DF  229 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH----TTCC----------CC
T ss_pred             CCCCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH----CCCC----------CC
T ss_conf             333555677552584400268989666230456999998038899899599-99999997----1899----------99


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             9367999999999529899899999999999
Q 002461          844 DTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      +......+.+++.+|++.+|++|||+.|+..
T Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         230 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCHHHHCC
T ss_conf             8547999999999985579768919789737


No 25 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=0  Score=335.84  Aligned_cols=249  Identities=19%  Similarity=0.302  Sum_probs=201.6

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             53314120207479999997-69989999995058998913336899998740376031687676339908999983468
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      +++.+.||+|+||.||+|.. .+|+.||+|+++.........+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  110 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  110 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCC
T ss_conf             59989993177829999999899979999998872646799999999999867997989199999989999999982899


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEC--CCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             8823442001234689676999999999999998816999935303643307858--89848996037642348887874
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLN--EKMQAKLADFGFSKIFPAESESH  764 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld--~~~~vkI~DFGla~~~~~~~~~~  764 (919)
                      |+|.+.+.. ....+++.....++.|++.||.|||   +.+|+||||||+|||++  .++.+||+|||+++.+...   .
T Consensus       111 g~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~---~  183 (352)
T d1koba_         111 GELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---E  183 (352)
T ss_dssp             CBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT---S
T ss_pred             CHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCCC---C
T ss_conf             808888986-3899899999999999999999999---77926513144553113467884899525630343788---7


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             31155458653374432478899414689999999999929997534878620001223322368742233620004899
Q 002461          765 ISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFD  844 (919)
Q Consensus       765 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~  844 (919)
                      ......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.    .+..      .......
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i~----~~~~------~~~~~~~  252 (352)
T d1koba_         184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVK----RCDW------EFDEDAF  252 (352)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHH----HCCC------CCCSSTT
T ss_pred             CEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH----HCCC------CCCCCCC
T ss_conf             20100476453489997479989763338989999999968899899799-99999998----4788------9893002


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             367999999999529899899999999999
Q 002461          845 TNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       845 ~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      ......+.+++.+|+..+|.+||++.|+++
T Consensus       253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             479999999999975699668918999960


No 26 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=336.63  Aligned_cols=260  Identities=26%  Similarity=0.406  Sum_probs=209.1

Q ss_pred             HHHHCCEECEECCEEEEEEEEC------CCCEEEEEEEECCCCC-CCHHHHHHHHHHHHC-CCCCEEEEEEEEECCCEEE
Q ss_conf             7533141202074799999976------9989999995058998-913336899998740-3760316876763399089
Q 002461          607 TNNFHRILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEAQLLMRV-HHRNLASLVGYCNDGGNVG  678 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l-~H~NIv~l~g~~~~~~~~~  678 (919)
                      .+.+.+.||+|+||.||+|.+.      .++.||||+++..... ....|.+|+.++..+ +||||++++|+|......+
T Consensus        24 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~  103 (311)
T d1t46a_          24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL  103 (311)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEE
T ss_conf             96985498206882999999806644778869999998742487799999999999876269998878998983199789


Q ss_pred             EEEEECCCCCHHHHHHCCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECC
Q ss_conf             9998346888234420012----------------346896769999999999999988169999353036433078588
Q 002461          679 LVYEYMAYGNLKQYLFDET----------------KEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNE  742 (919)
Q Consensus       679 LV~E~~~~GsL~~~L~~~~----------------~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~  742 (919)
                      +++||+++|+|.++++...                ...+++..+..++.|+++||+|||   +++++||||||+|||++.
T Consensus       104 lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~~  180 (311)
T d1t46a_         104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTH  180 (311)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEET
T ss_pred             EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCCCCCCCCC
T ss_conf             99973799879999985356654444453322233458899999999999999999887---579266624102100002


Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHCC
Q ss_conf             98489960376423488878743115545865337443247889941468999999999992999753487862-00012
Q 002461          743 KMQAKLADFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNT-HIVNR  821 (919)
Q Consensus       743 ~~~vkI~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~-~lv~~  821 (919)
                      ++.+|++|||+++...............|++.|+|||++.+..++.++||||||+++|||+|++.|+....... .+.+.
T Consensus       181 ~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~  260 (311)
T d1t46a_         181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM  260 (311)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred             CCCCCCCCCCHHEECCCCCCCEEEEECCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             57521023401023367886158620135968767788617999974001025899999985899887789989999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             2332236874223362000489936799999999952989989999999999999997755
Q 002461          822 VCPFLERGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEM  882 (919)
Q Consensus       822 v~~~~~~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~  882 (919)
                      +             +...+...+......+.+++.+||+.+|++||+|.+|+++|++.+..
T Consensus       261 i-------------~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         261 I-------------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             H-------------HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H-------------HCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCC
T ss_conf             8-------------66898898543659999999997577965792999999999876534


No 27 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=334.89  Aligned_cols=260  Identities=27%  Similarity=0.435  Sum_probs=203.8

Q ss_pred             HHHHCCEECEECCEEEEEEEEC------CCCEEEEEEEECCCCC-CCHHHHHHHHHHHHC-CCCCEEEEEEEEECC-CEE
Q ss_conf             7533141202074799999976------9989999995058998-913336899998740-376031687676339-908
Q 002461          607 TNNFHRILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEAQLLMRV-HHRNLASLVGYCNDG-GNV  677 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l-~H~NIv~l~g~~~~~-~~~  677 (919)
                      .+.+.+.||+|+||.||+|...      +++.||||+++..... ..+.+..|...+.++ +|+||+.+++++... ...
T Consensus        14 ~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~   93 (299)
T d1ywna1          14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL   93 (299)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCC
T ss_pred             HEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEE
T ss_conf             97984498416783999999867775557839999998600171789999999999886149984997411540479757


Q ss_pred             EEEEEECCCCCHHHHHHCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCC
Q ss_conf             99998346888234420012--------------3468967699999999999999881699993530364330785889
Q 002461          678 GLVYEYMAYGNLKQYLFDET--------------KEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEK  743 (919)
Q Consensus       678 ~LV~E~~~~GsL~~~L~~~~--------------~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~  743 (919)
                      ++|+||+++|+|.++++...              ...+++..++.++.|+++||.|||   +++|+||||||+|||++.+
T Consensus        94 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~~~  170 (299)
T d1ywna1          94 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEK  170 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGG
T ss_pred             EEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCEEECCC
T ss_conf             9999845899299999853666665322202332146899999999999999999887---3797178677310657799


Q ss_pred             CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCHHCCC
Q ss_conf             8489960376423488878743115545865337443247889941468999999999992999-753487862000122
Q 002461          744 MQAKLADFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLP-AIIRGYNNTHIVNRV  822 (919)
Q Consensus       744 ~~vkI~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~-p~~~~~~~~~lv~~v  822 (919)
                      +.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|.. ||........+...+
T Consensus       171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~  250 (299)
T d1ywna1         171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL  250 (299)
T ss_dssp             GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred             CCEEECCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             82898457520011356652224751667210203686468899663221367899999868899998999899999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             332236874223362000489936799999999952989989999999999999997755
Q 002461          823 CPFLERGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEM  882 (919)
Q Consensus       823 ~~~~~~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~  882 (919)
                          ..+..         ...+......+.+++.+||+.+|++||+|.|+++.|+++++.
T Consensus       251 ----~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         251 ----KEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             ----HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HCCCC---------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf             ----63898---------888865789999999997677966791999999999799867


No 28 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=334.62  Aligned_cols=269  Identities=23%  Similarity=0.365  Sum_probs=199.6

Q ss_pred             HHHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHH--HHHHHHHCCCCCEEEEEEEEECCC----EEEEEE
Q ss_conf             53314120207479999997699899999950589989133368--999987403760316876763399----089999
Q 002461          608 NNFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRT--EAQLLMRVHHRNLASLVGYCNDGG----NVGLVY  681 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~--Ei~~L~~l~H~NIv~l~g~~~~~~----~~~LV~  681 (919)
                      +-+.+.||+|+||.||+|++ +|+.||||+++...   ...+..  |+..+..++||||++++++|...+    ..++|+
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EEEEEEEEECCCEEEEEEEE-CCEEEEEEEECCCC---HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEE
T ss_conf             99988982078819999999-99899999987200---467999999999962799868326889983798604899999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-----CCCCEEEECCCCCEEEECCCCCEEEECCCCCCC
Q ss_conf             834688823442001234689676999999999999998816-----999935303643307858898489960376423
Q 002461          682 EYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHG-----CKPPIIHRDVKTANILLNEKMQAKLADFGFSKI  756 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~-----~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~  756 (919)
                      ||+++|+|.++++.   ..++|..+++++.|+|.||.|||+.     .+++|+||||||+|||++.++.+||+|||+++.
T Consensus        81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~  157 (303)
T d1vjya_          81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEEECCCCCC
T ss_conf             64669898999865---899989999999999999999887665204689866153173135786887768876386623


Q ss_pred             CCCCCCC--CCCCCCCCCCCCCCCCCCCCCC------CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCC---
Q ss_conf             4888787--4311554586533744324788------9941468999999999992999753487862000122332---
Q 002461          757 FPAESES--HISTSIVGTVGYLDPEYYASNR------LTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPF---  825 (919)
Q Consensus       757 ~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~------~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~---  825 (919)
                      .......  .......||+.|+|||++....      ++.++|||||||++|||+||..|+................   
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~  237 (303)
T d1vjya_         158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             CCCCCCCEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCH
T ss_conf             46777620013552503547678221056545467776750122015999999962899887663112410122556430


Q ss_pred             ---CCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             ---236874223362000489-9367999999999529899899999999999999977557
Q 002461          826 ---LERGDVRSIVDPRLEANF-DTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEME  883 (919)
Q Consensus       826 ---~~~~~l~~iiD~~l~~~~-~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~~  883 (919)
                         ..........+|.+.... ..+....+.+++.+||..+|++||+|.||++.|+++.+.+
T Consensus       238 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHC
T ss_conf             99999987502468887765577689999999999976069858959999999999888865


No 29 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=336.29  Aligned_cols=248  Identities=21%  Similarity=0.377  Sum_probs=200.8

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCC-CCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             533141202074799999976-998999999505899-891333689999874037603168767633990899998346
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~-~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      +++.+.||+|+||+||+|... +++.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~   90 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS   90 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCC
T ss_conf             69988994065839999999999989999998157731289999999999986799899919899998998889885268


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEC---CCCCEEEECCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858---898489960376423488878
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLN---EKMQAKLADFGFSKIFPAESE  762 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld---~~~~vkI~DFGla~~~~~~~~  762 (919)
                      +|+|.+++..  ...+++.....++.|++.||.|||   +.+++||||||+|||+.   +++.+||+|||+++.....  
T Consensus        91 gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~--  163 (307)
T d1a06a_          91 GGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--  163 (307)
T ss_dssp             SCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             CCCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHH---HCEEEEEEECCCCEEECCCCCCCEEEEECCCEEEECCCC--
T ss_conf             9848886530--367887899999999999987524---130556870463001104688824998315435872589--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             74311554586533744324788994146899999999999299975348786200012233223687422336200048
Q 002461          763 SHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEAN  842 (919)
Q Consensus       763 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~  842 (919)
                       .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+..    +..      .....
T Consensus       164 -~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-~~~~~~i~~----~~~------~~~~~  231 (307)
T d1a06a_         164 -SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND-AKLFEQILK----AEY------EFDSP  231 (307)
T ss_dssp             ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHT----TCC------CCCTT
T ss_pred             -CEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHC----CCC------CCCCC
T ss_conf             -704400328422591887379998078734515999999859799999899-999999861----687------77876


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             99367999999999529899899999999999
Q 002461          843 FDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       843 ~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      ........+.+++.+|+..+|++|||+.|+++
T Consensus       232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             66678999999999976089757918999862


No 30 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=336.25  Aligned_cols=243  Identities=29%  Similarity=0.378  Sum_probs=195.2

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCC---CHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             53314120207479999997-699899999950589989---13336899998740376031687676339908999983
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG---PKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~---~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      +...+.||+|+||+||+|.. .+++.||||+++......   .+.+.+|+.++++++||||+++++++.+.+..++|+||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEE
T ss_conf             67627970188809999999899939999998444435889999999999999977899982389999989988999980


Q ss_pred             CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             46888234420012346896769999999999999988169999353036433078588984899603764234888787
Q 002461          684 MAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       684 ~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +++|+|..++.  ....+++..+..++.|++.||.|||   +++|+||||||+|||++.++.+||+|||+++....    
T Consensus        97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----  167 (309)
T d1u5ra_          97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----  167 (309)
T ss_dssp             CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred             CCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCCCEEEECCCCCEEEEECCCCCCCCC----
T ss_conf             69994578997--3799999999999999999999998---68976667884217987999789844365334677----


Q ss_pred             CCCCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247---889941468999999999992999753487862000122332236874223362000
Q 002461          764 HISTSIVGTVGYLDPEYYAS---NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLE  840 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~---~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~  840 (919)
                        .....||+.|+|||++.+   ..++.++|||||||++|||++|+.||........ ...+   .. +...     .+.
T Consensus       168 --~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~-~~~i---~~-~~~~-----~~~  235 (309)
T d1u5ra_         168 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHI---AQ-NESP-----ALQ  235 (309)
T ss_dssp             --BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHH---HH-SCCC-----CCS
T ss_pred             --CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHH---HH-CCCC-----CCC
T ss_conf             --8731347663688998346788867214545589999999878899999799999-9999---82-8999-----888


Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             4899367999999999529899899999999999
Q 002461          841 ANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       841 ~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                         .......+.+++.+|+..+|++|||+.|+++
T Consensus       236 ---~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         236 ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             ---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf             ---7888999999999977379657918999971


No 31 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=339.82  Aligned_cols=251  Identities=24%  Similarity=0.379  Sum_probs=199.6

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC--CCHHHHHHHHHHHHCCCCCEEEEEEEEEC--CCEEEEEEE
Q ss_conf             53314120207479999997-69989999995058998--91333689999874037603168767633--990899998
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ--GPKQFRTEAQLLMRVHHRNLASLVGYCND--GGNVGLVYE  682 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~--~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~--~~~~~LV~E  682 (919)
                      +++.+.||+|+||+||+|.. .+|+.||+|.++.....  ..+.+.+|++++++++||||+++++++.+  .+..++|||
T Consensus         6 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmE   85 (269)
T d2java1           6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   85 (269)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEE
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEE
T ss_conf             79967983088919999999999979999998746579799999999999999778999824899999178998999995


Q ss_pred             ECCCCCHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCEEEECCCCCEEEECCCCCEEEECCCCCCCCC
Q ss_conf             346888234420012--346896769999999999999988169--9993530364330785889848996037642348
Q 002461          683 YMAYGNLKQYLFDET--KEALSWKDRLQIAVDAAQGLEYLHHGC--KPPIIHRDVKTANILLNEKMQAKLADFGFSKIFP  758 (919)
Q Consensus       683 ~~~~GsL~~~L~~~~--~~~ls~~~~~~ia~qia~aL~yLH~~~--~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~  758 (919)
                      |+++|+|.+++....  ...+++..++.++.|++.||.|||+..  ..+|+||||||+|||++.++.+||+|||+++.+.
T Consensus        86 y~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  165 (269)
T d2java1          86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  165 (269)
T ss_dssp             CCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-
T ss_pred             CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEECCCEEECC
T ss_conf             68999389999851545789999999999999999999999716778878858676542574788857980010003224


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             88787431155458653374432478899414689999999999929997534878620001223322368742233620
Q 002461          759 AESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPR  838 (919)
Q Consensus       759 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~  838 (919)
                      ..  ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+...+    ..+....     
T Consensus       166 ~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~-~~~~~~~i----~~~~~~~-----  233 (269)
T d2java1         166 HD--TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-QKELAGKI----REGKFRR-----  233 (269)
T ss_dssp             ------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHH----HHTCCCC-----
T ss_pred             CC--CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCC-HHHHHHHH----HCCCCCC-----
T ss_conf             57--775566778823279999839999938988752789999801889989989-99999999----7189988-----


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             004899367999999999529899899999999999
Q 002461          839 LEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       839 l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                          .+......+.+++.+|+..+|++||++.|+++
T Consensus       234 ----~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         234 ----IPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf             ----97435999999999976799557918999972


No 32 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=337.11  Aligned_cols=259  Identities=24%  Similarity=0.385  Sum_probs=205.6

Q ss_pred             HHHHCCEECEECCEEEEEEEECC----CCEEEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEE
Q ss_conf             75331412020747999999769----989999995058998-9133368999987403760316876763399089999
Q 002461          607 TNNFHRILGKGGFGTVYHGYLAD----GSEVAIKMLSASSSQ-GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVY  681 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~~----g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~  681 (919)
                      .+++.+.||+|+||.||+|.+..    +..||+|.++..... ..+.|.+|+.++++++||||++++|++. .+..++|+
T Consensus         8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~   86 (273)
T d1mp8a_           8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM   86 (273)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             HEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE-CCEEEEEE
T ss_conf             96987799307882999999936996449999999365668799999999999998689999856988995-37479999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             83468882344200123468967699999999999999881699993530364330785889848996037642348887
Q 002461          682 EYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAES  761 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~  761 (919)
                      ||+++|+|.+++.. ....+++..++.++.|+++||.|||   +.+++||||||+||+++.++.+||+|||+++..... 
T Consensus        87 E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~-  161 (273)
T d1mp8a_          87 ELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-  161 (273)
T ss_dssp             ECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHC---CCCEECCCCCHHHEEECCCCCEEECCCHHHEECCCC-
T ss_conf             84069807765422-4789999999999999987752302---267441410265532067896787650342133677-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8743115545865337443247889941468999999999992-999753487862000122332236874223362000
Q 002461          762 ESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLE  840 (919)
Q Consensus       762 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~  840 (919)
                      .........|++.|+|||++.+..++.++|||||||++|||++ |.+||.... ...+...+.    .+...        
T Consensus       162 ~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~-~~~~~~~i~----~~~~~--------  228 (273)
T d1mp8a_         162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIE----NGERL--------  228 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-GGGHHHHHH----TTCCC--------
T ss_pred             CCEECCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-HHHHHHHHH----CCCCC--------
T ss_conf             62330540058310326675169988745244424789999826999988899-999999998----18999--------


Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             489936799999999952989989999999999999997755787
Q 002461          841 ANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEMETA  885 (919)
Q Consensus       841 ~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~~~~  885 (919)
                       ..+......+.+++.+||..+|++||++.||++.|+.+++.+.+
T Consensus       229 -~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k~  272 (273)
T d1mp8a_         229 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA  272 (273)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf             -89877799999999997687976892999999999999778617


No 33 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=334.32  Aligned_cols=259  Identities=28%  Similarity=0.456  Sum_probs=208.2

Q ss_pred             HHHHCCEECEECCEEEEEEEECC--------CCEEEEEEEECCCCC-CCHHHHHHHHHHHHC-CCCCEEEEEEEEECCCE
Q ss_conf             75331412020747999999769--------989999995058998-913336899998740-37603168767633990
Q 002461          607 TNNFHRILGKGGFGTVYHGYLAD--------GSEVAIKMLSASSSQ-GPKQFRTEAQLLMRV-HHRNLASLVGYCNDGGN  676 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~~--------g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l-~H~NIv~l~g~~~~~~~  676 (919)
                      .+.+.+.||+|+||.||+|....        +..||||+++..... ...++.+|...+.++ +||||++++++|.+.+.
T Consensus        14 ~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~   93 (299)
T d1fgka_          14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP   93 (299)
T ss_dssp             GEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCE
T ss_conf             96970098516782899999857875556675499999988112868899999999999981399969734652201886


Q ss_pred             EEEEEEECCCCCHHHHHHCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECC
Q ss_conf             899998346888234420012--------------346896769999999999999988169999353036433078588
Q 002461          677 VGLVYEYMAYGNLKQYLFDET--------------KEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNE  742 (919)
Q Consensus       677 ~~LV~E~~~~GsL~~~L~~~~--------------~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~  742 (919)
                      .++||||+++|+|.+++....              ...+++..++.++.|++.||.|||   +.+++||||||+|||++.
T Consensus        94 ~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl~~  170 (299)
T d1fgka_          94 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTE  170 (299)
T ss_dssp             CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECT
T ss_pred             EEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEEEECCCCEEECC
T ss_conf             89999736999099999860677643222334574346799999999999999998766---379786302210224547


Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCC
Q ss_conf             98489960376423488878743115545865337443247889941468999999999992-99975348786200012
Q 002461          743 KMQAKLADFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNR  821 (919)
Q Consensus       743 ~~~vkI~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~  821 (919)
                      ++.+||+|||+++...............|+..|+|||.+.++.++.++||||||+++|||++ |.+||.. .....+.+.
T Consensus       171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~-~~~~~~~~~  249 (299)
T d1fgka_         171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKL  249 (299)
T ss_dssp             TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHH
T ss_pred             CCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHH
T ss_conf             8976762211101135555543146678884663266751798882555477588888740179898999-999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             2332236874223362000489936799999999952989989999999999999997755
Q 002461          822 VCPFLERGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEM  882 (919)
Q Consensus       822 v~~~~~~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~  882 (919)
                      +    ..+.         ....+......+.+++.+||+.+|++|||+.||++.|++++.+
T Consensus       250 i----~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         250 L----KEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             H----HTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H----HCCC---------CCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf             9----7288---------8898743529999999997667976793999999999888604


No 34 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=334.98  Aligned_cols=259  Identities=26%  Similarity=0.403  Sum_probs=207.9

Q ss_pred             HHCCEECEECCEEEEEEEEC------CCCEEEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEE
Q ss_conf             33141202074799999976------9989999995058998-9133368999987403760316876763399089999
Q 002461          609 NFHRILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVY  681 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~------~g~~VAVK~l~~~~~~-~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~  681 (919)
                      .+.+.||+|+||+||+|.+.      +++.||||+++..... ....|.+|+.++++++||||++++|+|......++|+
T Consensus        23 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~  102 (308)
T d1p4oa_          23 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM  102 (308)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEE
T ss_conf             88359820788189999987864477896899999870128689999999999999769998841254784288106777


Q ss_pred             EECCCCCHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCC
Q ss_conf             8346888234420012--------34689676999999999999998816999935303643307858898489960376
Q 002461          682 EYMAYGNLKQYLFDET--------KEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGF  753 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~--------~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGl  753 (919)
                      ||+++|+|.+++....        ...+++..+.+++.|+++||.|||   +.+++||||||+|||++.++.+||+|||+
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~DFGl  179 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM  179 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             EECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECEECCCCEEECCCCEEEEEECCC
T ss_conf             604899889998750332113444688799999999999999999876---47965432867754035996499942454


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
Q ss_conf             42348887874311554586533744324788994146899999999999299975348786200012233223687422
Q 002461          754 SKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRS  833 (919)
Q Consensus       754 a~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~  833 (919)
                      ++...............|++.|+|||.+.+..++.++||||||+++|||+||+.++..+.........+.    .+... 
T Consensus       180 a~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~----~~~~~-  254 (308)
T d1p4oa_         180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EGGLL-  254 (308)
T ss_dssp             CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH----TTCCC-
T ss_pred             CEECCCCCCEEECCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH----HCCCC-
T ss_conf             2023577630313402316323788887369988333444378999999968999999989999999998----08888-


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             33620004899367999999999529899899999999999999977557
Q 002461          834 IVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLEME  883 (919)
Q Consensus       834 iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~~~  883 (919)
                              ..+......+.+++.+||+.+|++||+|.+|+++|++.++..
T Consensus       255 --------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~  296 (308)
T d1p4oa_         255 --------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  296 (308)
T ss_dssp             --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             --------CCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCC
T ss_conf             --------886335399999999975779658939999999978761778


No 35 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=328.86  Aligned_cols=249  Identities=21%  Similarity=0.320  Sum_probs=199.5

Q ss_pred             HHHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC------CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
Q ss_conf             753314120207479999997-69989999995058998------91333689999874037603168767633990899
Q 002461          607 TNNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ------GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGL  679 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~------~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~L  679 (919)
                      .+++.+.||+|+||+||+|.. .+|+.||||+++.....      ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf             77982798117895999999999998999999875663213406899999999999986799899938899997998999


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC----CEEEECCCCCC
Q ss_conf             99834688823442001234689676999999999999998816999935303643307858898----48996037642
Q 002461          680 VYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKM----QAKLADFGFSK  755 (919)
Q Consensus       680 V~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~----~vkI~DFGla~  755 (919)
                      ||||+++|+|.+++..  .+.+++..+..++.|++.||+|||   +.+++||||||+|||++.++    .+|++|||+++
T Consensus        91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEECCCCCCCCCHHCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCCCEEEEECCCCCCCCEEECCHHHHH
T ss_conf             9986778643100103--564215578999999999987666---25422113330127982589866646964334421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
Q ss_conf             34888787431155458653374432478899414689999999999929997534878620001223322368742233
Q 002461          756 IFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIV  835 (919)
Q Consensus       756 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~ii  835 (919)
                      .....   .......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.    .+...  .
T Consensus       166 ~~~~~---~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-~~~~~~i~----~~~~~--~  235 (293)
T d1jksa_         166 KIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVS----AVNYE--F  235 (293)
T ss_dssp             ECTTS---CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH----TTCCC--C
T ss_pred             HCCCC---CCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHH----HCCCC--C
T ss_conf             05777---631224777743099998189999766522140999999708899889999-99999998----16888--8


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             620004899367999999999529899899999999999
Q 002461          836 DPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       836 D~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      .+...    ......+.+++.+|+..+|++||++.|+++
T Consensus       236 ~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         236 EDEYF----SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CHHHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHC----CCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             70104----788999999999986389668919999961


No 36 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=326.21  Aligned_cols=245  Identities=22%  Similarity=0.311  Sum_probs=200.3

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECC---CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             53314120207479999997-69989999995058---998913336899998740376031687676339908999983
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSAS---SSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~---~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      +++.+.||+|+||.||+|+. .+|+.||+|++++.   .....+.+.+|+.+|+.++||||+++++++.+....++|+||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey   86 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEC
T ss_conf             28988983176849999999899989999998156544979999999999999867999887787640356421110003


Q ss_pred             CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             46888234420012346896769999999999999988169999353036433078588984899603764234888787
Q 002461          684 MAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       684 ~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +++|+|.+++..  ...+++.....++.|++.||.|||   +++++||||||+|||++.++.+||+|||+++.....  .
T Consensus        87 ~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~--~  159 (337)
T d1o6la_          87 ANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--G  159 (337)
T ss_dssp             CTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT--T
T ss_pred             CCCCCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHEEECCCCCEEEEECCCCCCCCCC--C
T ss_conf             579860555532--567759999999999965211343---159622464777847658998888205652003567--8


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247889941468999999999992999753487862000122332236874223362000489
Q 002461          764 HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                      .......||+.|+|||++.+..++.++||||+||++|||++|++||..... ..+.+.+    ..+.+          .+
T Consensus       160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~-~~~~~~i----~~~~~----------~~  224 (337)
T d1o6la_         160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI----LMEEI----------RF  224 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH----HHCCC----------CC
T ss_pred             CCCCCCEECHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCH-HHHHHHH----HCCCC----------CC
T ss_conf             620551008899666650489888333102230678899878999999699-9999998----52899----------89


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHH
Q ss_conf             9367999999999529899899999-----999999
Q 002461          844 DTNSVWKVAETAMECVPSISFQRPT-----MSHVVT  874 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RPs-----m~eVv~  874 (919)
                      +......+.+++..|+..+|.+||+     +.|+++
T Consensus       225 p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCCCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHC
T ss_conf             866899999999866638934422565234999972


No 37 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=324.46  Aligned_cols=242  Identities=25%  Similarity=0.363  Sum_probs=198.7

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECC---CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             53314120207479999997-69989999995058---998913336899998740376031687676339908999983
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSAS---SSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~---~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      +++.+.||+|+||+||+|.. .+|+.||+|+++..   .....+.+.+|+.+++.++||||+++++++.+.+..++|+||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCEEEEEEEE
T ss_conf             08888972076808999999899979999998457754889999999999999863696753303568528800567650


Q ss_pred             CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             46888234420012346896769999999999999988169999353036433078588984899603764234888787
Q 002461          684 MAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       684 ~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +++|+|..++.  ....+++.....++.|++.||.|||   +++|+||||||+|||++.++.+||+|||+++.....   
T Consensus        86 ~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~---  157 (316)
T d1fota_          86 IEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---  157 (316)
T ss_dssp             CCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred             CCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHC---CCCEECCCCCCHHEEECCCCCEEEECCCCCEEECCC---
T ss_conf             37863223432--2221110079999999987655412---476770556810503868998898317521671245---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247889941468999999999992999753487862000122332236874223362000489
Q 002461          764 HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                        .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.    .+..          .+
T Consensus       158 --~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-~~~~~~i~----~~~~----------~~  220 (316)
T d1fota_         158 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKIL----NAEL----------RF  220 (316)
T ss_dssp             --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHH----HCCC----------CC
T ss_pred             --CCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCH-HHHHHHHH----CCCC----------CC
T ss_conf             --6434576343599998389998043046533368999759899999699-99999997----0898----------89


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCC-----CHHHHHH
Q ss_conf             936799999999952989989999-----9999999
Q 002461          844 DTNSVWKVAETAMECVPSISFQRP-----TMSHVVT  874 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RP-----sm~eVv~  874 (919)
                      +......+.+++.+|+..+|.+|+     ++.++++
T Consensus       221 p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         221 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHC
T ss_conf             977899999999999544997666431021999981


No 38 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=0  Score=324.33  Aligned_cols=246  Identities=23%  Similarity=0.300  Sum_probs=191.4

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCC---CCCCHHHHHH---HHHHHHCCCCCEEEEEEEEECCCEEEEE
Q ss_conf             533141202074799999976-99899999950589---9891333689---9998740376031687676339908999
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTE---AQLLMRVHHRNLASLVGYCNDGGNVGLV  680 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~---~~~~~~f~~E---i~~L~~l~H~NIv~l~g~~~~~~~~~LV  680 (919)
                      +.+.+.||+|+||.||+|+.. +|+.||+|++....   ......+.+|   +.+++.++||||+++++++...+..++|
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
T ss_conf             85101884288909999999999979999998458754266799999999999998508998588999999989988999


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             98346888234420012346896769999999999999988169999353036433078588984899603764234888
Q 002461          681 YEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAE  760 (919)
Q Consensus       681 ~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~  760 (919)
                      |||+++|+|.+++..  ...+++..+..++.|++.||.|||   +++++||||||+|||++.++.+||+|||+++.+...
T Consensus        86 mE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             ECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             EEECCCCCHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCC
T ss_conf             991489838999873--255327899999999999999999---779622044422167858896798220102333788


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78743115545865337443247-88994146899999999999299975348786200012233223687422336200
Q 002461          761 SESHISTSIVGTVGYLDPEYYAS-NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRL  839 (919)
Q Consensus       761 ~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l  839 (919)
                          ......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ... +........      .  
T Consensus       161 ----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~-~~~~~~~~~------~--  226 (364)
T d1omwa3         161 ----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHE-IDRMTLTMA------V--  226 (364)
T ss_dssp             ----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC-HHH-HHHHSSSCC------C--
T ss_pred             ----CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH-HHH-HHHHCCCCC------C--
T ss_conf             ----64331134554216876038999844104677899999985999888899899-999-998604688------8--


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHH
Q ss_conf             04899367999999999529899899999-----999999
Q 002461          840 EANFDTNSVWKVAETAMECVPSISFQRPT-----MSHVVT  874 (919)
Q Consensus       840 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPs-----m~eVv~  874 (919)
                        ..+......+.+++.+|+..+|++||+     ++|+++
T Consensus       227 --~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         227 --ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             --CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             --CCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHC
T ss_conf             --78877899999999998566988808874357999974


No 39 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=322.53  Aligned_cols=246  Identities=23%  Similarity=0.335  Sum_probs=193.4

Q ss_pred             CCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHC-CCCCEEEEEEEEEC----CCEEEEEEEEC
Q ss_conf             14120207479999997-69989999995058998913336899998740-37603168767633----99089999834
Q 002461          611 HRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRV-HHRNLASLVGYCND----GGNVGLVYEYM  684 (919)
Q Consensus       611 ~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l-~H~NIv~l~g~~~~----~~~~~LV~E~~  684 (919)
                      .++||+|+||.||+|.. .+++.||||+++.     ...+.+|+.++.++ +||||+++++++.+    ....++||||+
T Consensus        17 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~   91 (335)
T d2ozaa1          17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL   91 (335)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEEECCCEEEEEEEECCCCCEEEEEEECC-----CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECC
T ss_conf             0796545486999999889998999999897-----47799999999986699997829899950346897899999778


Q ss_pred             CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECC---CCCEEEECCCCCCCCCCCC
Q ss_conf             6888234420012346896769999999999999988169999353036433078588---9848996037642348887
Q 002461          685 AYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNE---KMQAKLADFGFSKIFPAES  761 (919)
Q Consensus       685 ~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~---~~~vkI~DFGla~~~~~~~  761 (919)
                      ++|+|.+++.......+++.....++.|++.||+|||   +.+++||||||+|||++.   ++.+||+|||+++......
T Consensus        92 ~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~  168 (335)
T d2ozaa1          92 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN  168 (335)
T ss_dssp             CSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC
T ss_pred             CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             9984999998627877579999999999999999999---7698644410022011355556631135455123336888


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             87431155458653374432478899414689999999999929997534878620001223322368742233620004
Q 002461          762 ESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEA  841 (919)
Q Consensus       762 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~  841 (919)
                         ......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ....+......+... ...+.   
T Consensus       169 ---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~-~~~~~~~~i~~~~~~-~~~~~---  240 (335)
T d2ozaa1         169 ---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYE-FPNPE---  240 (335)
T ss_dssp             ---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------CCCSCSSS-CCTTH---
T ss_pred             ---CCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHH-HHHHHHHHHHCCCCC-CCCCC---
T ss_conf             ---6432267756379277748988888888764516778865889988988778-899999998538888-89854---


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             899367999999999529899899999999999
Q 002461          842 NFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       842 ~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                        .......+.+++.+|+..+|++||++.|+++
T Consensus       241 --~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         241 --WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             --HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             --3469999999999975699657909999970


No 40 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=330.60  Aligned_cols=254  Identities=24%  Similarity=0.386  Sum_probs=201.3

Q ss_pred             HHHCCEECEECCEEEEEEEECC--C--CEEEEEEEECCCC---CCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEE
Q ss_conf             5331412020747999999769--9--8999999505899---8913336899998740376031687676339908999
Q 002461          608 NNFHRILGKGGFGTVYHGYLAD--G--SEVAIKMLSASSS---QGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLV  680 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~~--g--~~VAVK~l~~~~~---~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV  680 (919)
                      +.+.+.||+|+||+||+|.+..  +  ..||||+++....   ...++|.+|+.++++++||||++++|++.+ ...++|
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv   88 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMV   88 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             EEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-CCHHEE
T ss_conf             1997898038883999999988999079999999983555798999999999999986899998789877740-100114


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             98346888234420012346896769999999999999988169999353036433078588984899603764234888
Q 002461          681 YEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAE  760 (919)
Q Consensus       681 ~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~  760 (919)
                      +||+++|++.+.+... ...+++..++.++.|++.||.|||   +++++||||||+|||++.++.+||+|||+++.....
T Consensus        89 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          89 TELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             EEEECCCCHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEEEECHHHHCCCCCCCEEECCCHHHHHCCCC
T ss_conf             6542386125444212-689999999999999999998752---178752056688815655654332561155530358


Q ss_pred             CCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             7874-3115545865337443247889941468999999999992-9997534878620001223322368742233620
Q 002461          761 SESH-ISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELIT-GLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPR  838 (919)
Q Consensus       761 ~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELlt-G~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~  838 (919)
                      .... ......|+..|+|||++.+..++.++||||||+++|||+| |+.||... +......++..   .+.        
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~-~~~~~~~~i~~---~~~--------  232 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDK---EGE--------  232 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHT---SCC--------
T ss_pred             CCCCEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHH---CCC--------
T ss_conf             875265476325731079999837999942156614899999996899999996-99999999984---799--------


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             00489936799999999952989989999999999999997
Q 002461          839 LEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKC  879 (919)
Q Consensus       839 l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~  879 (919)
                       +..........+.+++.+||..+|++||+|.||.+.|++.
T Consensus       233 -~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         233 -RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHC
T ss_conf             -9998544539999999997688966792999999999964


No 41 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=322.59  Aligned_cols=257  Identities=25%  Similarity=0.370  Sum_probs=203.0

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCC---CHHHHHHHHHHHHCCCCCEEEEEEEEECCC----EEEE
Q ss_conf             53314120207479999997-699899999950589989---133368999987403760316876763399----0899
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG---PKQFRTEAQLLMRVHHRNLASLVGYCNDGG----NVGL  679 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~---~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~----~~~L  679 (919)
                      +.+.+.||+|+||.||+|.. .+|+.||+|+++......   ...+.+|+.+++.++||||+++++++....    ..++
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEE
T ss_conf             69868996089929999999999989999998556646989999999999999856999887311435432688766999


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCC
Q ss_conf             99834688823442001234689676999999999999998816999935303643307858898489960376423488
Q 002461          680 VYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPA  759 (919)
Q Consensus       680 V~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~  759 (919)
                      ||||+++|+|.+++.  ..+.+++.....++.|++.||+|||   +.+++||||||+|||++.+...+++|||.+.....
T Consensus        89 vmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          89 VMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEECCCCCEEHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCC
T ss_conf             997788987101120--3589999999999999999999998---57952763467556657543201003444322123


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             87-87431155458653374432478899414689999999999929997534878620001223322368742233620
Q 002461          760 ES-ESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPR  838 (919)
Q Consensus       760 ~~-~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~  838 (919)
                      .. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..........    .....+...    + 
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~----~~~~~~~~~----~-  234 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIP----P-  234 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHHCCCCC----G-
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHH----HHHHCCCCC----C-
T ss_conf             5443333464257624369999839999966320265289999976979989969999999----998469999----7-


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHH
Q ss_conf             00489936799999999952989989999-9999999999977
Q 002461          839 LEANFDTNSVWKVAETAMECVPSISFQRP-TMSHVVTELKKCL  880 (919)
Q Consensus       839 l~~~~~~~~~~~l~~li~~Cl~~~P~~RP-sm~eVv~~Le~~~  880 (919)
                        ..........+.+++.+|+..+|++|| +++++.+.|..++
T Consensus       235 --~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         235 --SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             --GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             --CHHCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHH
T ss_conf             --10034789999999999866797677739999999999975


No 42 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=322.09  Aligned_cols=242  Identities=23%  Similarity=0.327  Sum_probs=198.3

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECC---CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf             533141202074799999976-9989999995058---998913336899998740376031687676339908999983
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEY  683 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~---~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~  683 (919)
                      +++.+.||+|+||.||+|... +|+.||||+++..   .....+.+.+|+.+++.++||||+++++++......++|+|+
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~  122 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf             08988961176808999999899989999998267745889999999999999974877274034444322222322223


Q ss_pred             CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             46888234420012346896769999999999999988169999353036433078588984899603764234888787
Q 002461          684 MAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESES  763 (919)
Q Consensus       684 ~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~  763 (919)
                      +.+|+|.+++..  ...+++.....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+...   
T Consensus       123 ~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~---  194 (350)
T d1rdqe_         123 VAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---  194 (350)
T ss_dssp             CTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred             CCCCCHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHCCCCCCCCEEEEECEEEEECCCC---
T ss_conf             346622666751--589899999999999999899998---599861767999936077897886101033322566---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43115545865337443247889941468999999999992999753487862000122332236874223362000489
Q 002461          764 HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANF  843 (919)
Q Consensus       764 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~  843 (919)
                        .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.    .+..          ..
T Consensus       195 --~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~-~~~~~~~i~----~~~~----------~~  257 (350)
T d1rdqe_         195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIV----SGKV----------RF  257 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHH----HCCC----------CC
T ss_pred             --CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-HHHHHHHHH----CCCC----------CC
T ss_conf             --643367635678899717998853311450078999975889989959-999999986----1798----------89


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCC-----CHHHHHH
Q ss_conf             936799999999952989989999-----9999999
Q 002461          844 DTNSVWKVAETAMECVPSISFQRP-----TMSHVVT  874 (919)
Q Consensus       844 ~~~~~~~l~~li~~Cl~~~P~~RP-----sm~eVv~  874 (919)
                      +......+.+++..|+..+|.+|+     ++.++++
T Consensus       258 p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHC
T ss_conf             766899999999998340998606553454999971


No 43 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=319.11  Aligned_cols=254  Identities=25%  Similarity=0.295  Sum_probs=194.0

Q ss_pred             CEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC-----CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             4120207479999997-69989999995058998-----91333689999874037603168767633990899998346
Q 002461          612 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ-----GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       612 ~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~-----~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      ++||+|+||+||+|.. .+|+.||||+++.....     ..+.+.+|+.+++.++||||+++++++...+..++||||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             EEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHHC
T ss_conf             38512728299999999999699999984202124567999999999999986799998689854225874022045534


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858898489960376423488878743
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHI  765 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~  765 (919)
                      ++.+....  .....+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++......  ..
T Consensus        84 ~~~~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~--~~  156 (299)
T d1ua2a_          84 TDLEVIIK--DNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--RA  156 (299)
T ss_dssp             EEHHHHHT--TCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC--CC
T ss_pred             CHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHH---CCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC--CC
T ss_conf             50776554--12667789999999999999998863---1635503577625885377841146576100057875--54


Q ss_pred             CCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCC------------
Q ss_conf             1155458653374432478-899414689999999999929997534878620001223322368742------------
Q 002461          766 STSIVGTVGYLDPEYYASN-RLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVR------------  832 (919)
Q Consensus       766 ~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~------------  832 (919)
                      .....||..|+|||++... .++.++||||+||++|||++|++||....+ .+....+.+........            
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T d1ua2a_         157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYV  235 (299)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             CCCEECCHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCH-HHHHHHHHHHCCCCCHHHCCCHHCCCHHH
T ss_conf             33020473336399972677888056436304289999859699999999-99999999851899725452100021344


Q ss_pred             ---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             ---233620004899367999999999529899899999999999
Q 002461          833 ---SIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       833 ---~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                         ......+.. ........+.+++.+|+..+|++|||+.|+++
T Consensus       236 ~~~~~~~~~~~~-~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         236 TFKSFPGIPLHH-IFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCCCCCCHHH-HCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHCCCCCCCHHH-HCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             303478988678-56568999999999976389456908999967


No 44 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=320.16  Aligned_cols=245  Identities=22%  Similarity=0.328  Sum_probs=196.2

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECC---CCCCCHHHHHHHHHHH-HCCCCCEEEEEEEEECCCEEEEEEE
Q ss_conf             533141202074799999976-9989999995058---9989133368999987-4037603168767633990899998
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEAQLLM-RVHHRNLASLVGYCNDGGNVGLVYE  682 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~---~~~~~~~f~~Ei~~L~-~l~H~NIv~l~g~~~~~~~~~LV~E  682 (919)
                      +.+.+.||+|+||+||+|+.. +++.||||++++.   .....+.+..|..++. .++||||+++++++.+++..++|+|
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEE
T ss_conf             18865894087828999999999989999998055533848999999999999984799968789889704983167775


Q ss_pred             ECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             34688823442001234689676999999999999998816999935303643307858898489960376423488878
Q 002461          683 YMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESE  762 (919)
Q Consensus       683 ~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~  762 (919)
                      |+++|+|.+++..  ...+++.....++.|++.||.|||   +++++||||||+|||++.++.+||+|||+++.....  
T Consensus        84 y~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~--  156 (320)
T d1xjda_          84 YLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--  156 (320)
T ss_dssp             CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred             ECCCCCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCCCCEEECCCCCEECCCCCHHHHCCCC--
T ss_conf             0379808998640--478999999999999999999998---689340347654044448996301555302323566--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             74311554586533744324788994146899999999999299975348786200012233223687422336200048
Q 002461          763 SHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEAN  842 (919)
Q Consensus       763 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~  842 (919)
                      ........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...+...+    ..+.      +    .
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~-~~~~~~~i----~~~~------~----~  221 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD-EEELFHSI----RMDN------P----F  221 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHH----HHCC------C----C
T ss_pred             CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHH----HCCC------C----C
T ss_conf             533454578777689999827998832320112278989873889999989-99999999----7189------9----8


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCHH-HHHH
Q ss_conf             9936799999999952989989999999-9999
Q 002461          843 FDTNSVWKVAETAMECVPSISFQRPTMS-HVVT  874 (919)
Q Consensus       843 ~~~~~~~~l~~li~~Cl~~~P~~RPsm~-eVv~  874 (919)
                      ++......+.+++.+|+..+|++||++. ++++
T Consensus       222 ~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf             975679999999999654489878388999980


No 45 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=0  Score=314.89  Aligned_cols=248  Identities=25%  Similarity=0.339  Sum_probs=197.6

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCC---------CHHHHHHHHHHHHCC-CCCEEEEEEEEECCCE
Q ss_conf             53314120207479999997-699899999950589989---------133368999987403-7603168767633990
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG---------PKQFRTEAQLLMRVH-HRNLASLVGYCNDGGN  676 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~---------~~~f~~Ei~~L~~l~-H~NIv~l~g~~~~~~~  676 (919)
                      +++.+.||+|+||+||+|+. .+|+.+|||+++......         .+.+.+|+.++++++ ||||+++++++.+.+.
T Consensus         5 y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~   84 (277)
T d1phka_           5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   84 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
T ss_conf             88852884176849999999999989999999624464114788899999999999999985079974799762146760


Q ss_pred             EEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCC
Q ss_conf             89999834688823442001234689676999999999999998816999935303643307858898489960376423
Q 002461          677 VGLVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKI  756 (919)
Q Consensus       677 ~~LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~  756 (919)
                      .++||||+++|+|.+++..  ...+++..+..++.|+++||+|||   +.+++||||||+|||++.++.+||+|||+++.
T Consensus        85 ~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          85 FFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             EEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEECCCCCHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCEEEECCCCCEEECCCHHEEE
T ss_conf             5999976898668999986--599999999999999999999998---75994323462548986899838712403167


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC
Q ss_conf             488878743115545865337443247------88994146899999999999299975348786200012233223687
Q 002461          757 FPAESESHISTSIVGTVGYLDPEYYAS------NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGD  830 (919)
Q Consensus       757 ~~~~~~~~~~~~~~gt~~Y~APE~l~~------~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~  830 (919)
                      .....   ......|+..|+|||.+.+      ..++.++||||+||++|||++|+.||...... ...+.+    ..+.
T Consensus       160 ~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~-~~~~~i----~~~~  231 (277)
T d1phka_         160 LDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LMLRMI----MSGN  231 (277)
T ss_dssp             CCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH----HHTC
T ss_pred             CCCCC---CEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCHH-HHHHHH----HHCC
T ss_conf             26887---213452467888988860534456788992331856560231032288898899999-999999----8189


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             42233620004899367999999999529899899999999999
Q 002461          831 VRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       831 l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      ..      ............+.+++.+|++.+|++||++.|+++
T Consensus       232 ~~------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         232 YQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CC------CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             88------898543468999999999976589668919999973


No 46 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=317.69  Aligned_cols=248  Identities=16%  Similarity=0.258  Sum_probs=197.4

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             533141202074799999976-9989999995058998913336899998740376031687676339908999983468
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      +.+.+.||+|+||+||+|... +++.||+|+++... .....+.+|+.+|+.++||||+++++++.+.+..++||||+++
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~g   85 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG   85 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEECCCC
T ss_conf             588789831778399999998999699999975786-6599999999999857997989098999889988999953899


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCC--CCEEEECCCCCCCCCCCCCCC
Q ss_conf             882344200123468967699999999999999881699993530364330785889--848996037642348887874
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEK--MQAKLADFGFSKIFPAESESH  764 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~--~~vkI~DFGla~~~~~~~~~~  764 (919)
                      |+|.+++... ...+++.....++.|++.||.|||   +.+|+||||||+|||++.+  ..+||+|||+++.....   .
T Consensus        86 g~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~---~  158 (321)
T d1tkia_          86 LDIFERINTS-AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG---D  158 (321)
T ss_dssp             CBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT---C
T ss_pred             CCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCC---C
T ss_conf             8088998753-899999999999999999999998---76997513554443443788518997644111003467---7


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             31155458653374432478899414689999999999929997534878620001223322368742233620004899
Q 002461          765 ISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDPRLEANFD  844 (919)
Q Consensus       765 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~~l~~~~~  844 (919)
                      ......+++.|+|||...+..++.++||||+||++|||++|+.||..... ......+.    .+..  .++.....   
T Consensus       159 ~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~-~~~~~~i~----~~~~--~~~~~~~~---  228 (321)
T d1tkia_         159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIM----NAEY--TFDEEAFK---  228 (321)
T ss_dssp             EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHH----HTCC--CCCHHHHT---
T ss_pred             CCCCCCCCCCCCCCHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCH-HHHHHHHH----HCCC--CCCHHHCC---
T ss_conf             53212233222340210487778401130279999999828999999899-99999998----3899--98802236---


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             367999999999529899899999999999
Q 002461          845 TNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       845 ~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                       .....+.+++..|+..+|++||++.|+++
T Consensus       229 -~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         229 -EISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -CCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             -78999999999986699668909999963


No 47 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=310.76  Aligned_cols=259  Identities=20%  Similarity=0.283  Sum_probs=196.3

Q ss_pred             HHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCC--CCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             3314120207479999997-6998999999505899--891333689999874037603168767633990899998346
Q 002461          609 NFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS--QGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~--~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      ...+.||+|+||+||+|.. .+|+.||+|+++....  .....+.+|+.++++++||||+++++++.+.++.++|+||+.
T Consensus         5 ~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~   84 (298)
T d1gz8a_           5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   84 (298)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECC
T ss_conf             76517723768099999999999799999980222575899999999999986799838874453322432037886237


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858898489960376423488878743
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHI  765 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~  765 (919)
                      + ++.+.+.......+++..+..++.|++.||.|||   +.+|+||||||+|||++.+..+||+|||+++.....  ...
T Consensus        85 ~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~--~~~  158 (298)
T d1gz8a_          85 Q-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRT  158 (298)
T ss_dssp             E-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC--SBC
T ss_pred             C-CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH---CCCEECCCCCCHHEEECCCCCCEECCCCCCEECCCC--CCC
T ss_conf             7-4455544202568888999999999999999865---288992135711401134676210357861343688--641


Q ss_pred             CCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCC--CCC---CCCC------
Q ss_conf             11554586533744324788-99414689999999999929997534878620001223322--368---7422------
Q 002461          766 STSIVGTVGYLDPEYYASNR-LTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFL--ERG---DVRS------  833 (919)
Q Consensus       766 ~~~~~gt~~Y~APE~l~~~~-~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~--~~~---~l~~------  833 (919)
                      .....|+..|+|||.+.... ++.++||||+||++|+|++|+.||........+........  .+.   ....      
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP  238 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             CEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
T ss_conf             00103652154112213665777422103333134279668799898899999999998328983331444222421243


Q ss_pred             ----CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             ----33620004899367999999999529899899999999999
Q 002461          834 ----IVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       834 ----iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                          ........ ........+.+++.+|+..+|++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~-~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         239 SFPKWARQDFSK-VVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             TSCCCCCCCHHH-HSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCCCHHH-HCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             454322220444-16678999999999976399557918999967


No 48 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=306.25  Aligned_cols=259  Identities=20%  Similarity=0.313  Sum_probs=191.4

Q ss_pred             HHHCCEECEECCEEEEEEEE-CC-CCEEEEEEEECCC--CCCCHHHHHHHHHHHHC---CCCCEEEEEEEEEC-----CC
Q ss_conf             53314120207479999997-69-9899999950589--98913336899998740---37603168767633-----99
Q 002461          608 NNFHRILGKGGFGTVYHGYL-AD-GSEVAIKMLSASS--SQGPKQFRTEAQLLMRV---HHRNLASLVGYCND-----GG  675 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~-g~~VAVK~l~~~~--~~~~~~f~~Ei~~L~~l---~H~NIv~l~g~~~~-----~~  675 (919)
                      +++.+.||+|+||+||+|.. .+ ++.||||+++...  ......+.+|+.+++.+   +||||+++++++..     ..
T Consensus         9 Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~   88 (305)
T d1blxa_           9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   88 (305)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             EEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
T ss_conf             79888992155869999999888998999999802324516799999999999987425898802366322146666674


Q ss_pred             EEEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCC
Q ss_conf             08999983468882344200123468967699999999999999881699993530364330785889848996037642
Q 002461          676 NVGLVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSK  755 (919)
Q Consensus       676 ~~~LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~  755 (919)
                      ..++++|++.++.+.... ......+++.....++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+++
T Consensus        89 ~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          89 KLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             EEEEEEEECCCCCHHHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCCCEEEECCCCCEEECCHHHHH
T ss_conf             699999740587144444-303789998999999999999999997---5889835798627898589975421000101


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCC---C---
Q ss_conf             3488878743115545865337443247889941468999999999992999753487862000122332236---8---
Q 002461          756 IFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLER---G---  829 (919)
Q Consensus       756 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~---~---  829 (919)
                      ....   ........||+.|+|||++.+..++.++||||+||++|||++|+.||....+... ...+......   .   
T Consensus       165 ~~~~---~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~  240 (305)
T d1blxa_         165 IYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEEDWP  240 (305)
T ss_dssp             CCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGGGSC
T ss_pred             HHCC---CCCCCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHCCCCHHCCC
T ss_conf             1002---3457776548511483100179888111000328999999878799899898999-99999840799611053


Q ss_pred             ---CCC-CC---CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             ---742-23---3620004899367999999999529899899999999999
Q 002461          830 ---DVR-SI---VDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       830 ---~l~-~i---iD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                         ... ..   ........+.......+.+++.+|+..+|++|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         241 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             2111103330223456454404458999999999987489667918999966


No 49 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=307.04  Aligned_cols=263  Identities=23%  Similarity=0.268  Sum_probs=191.6

Q ss_pred             HHHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC------CCEEEE
Q ss_conf             7533141202074799999976-998999999505899891333689999874037603168767633------990899
Q 002461          607 TNNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLASLVGYCND------GGNVGL  679 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~------~~~~~L  679 (919)
                      +++..++||+|+||+||+|+.. +|+.||||+++...    ....+|+.++++++|+||+++++++..      ..+.++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCC----HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf             7675169821768399999999999799999988160----689999999986689898738789974476577318999


Q ss_pred             EEEECCCCCHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC-CEEEECCCCCCCC
Q ss_conf             9983468882344200-1234689676999999999999998816999935303643307858898-4899603764234
Q 002461          680 VYEYMAYGNLKQYLFD-ETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKM-QAKLADFGFSKIF  757 (919)
Q Consensus       680 V~E~~~~GsL~~~L~~-~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~-~vkI~DFGla~~~  757 (919)
                      |+||++++.+...... .....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++ .+||+|||+++..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHC
T ss_conf             9841688607888863103689999999999999999999998---6687645788603787358971167336605440


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCC---------
Q ss_conf             88878743115545865337443247-88994146899999999999299975348786200012233223---------
Q 002461          758 PAESESHISTSIVGTVGYLDPEYYAS-NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLE---------  827 (919)
Q Consensus       758 ~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~---------  827 (919)
                      ....   ......|+..|+|||.+.+ ..++.++||||+||++|||++|++||........+.... ....         
T Consensus       174 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~-~~~g~~~~~~~~~  249 (350)
T d1q5ka_         174 VRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-KVLGTPTREQIRE  249 (350)
T ss_dssp             CTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH-HHHCCCCHHHHHH
T ss_pred             CCCC---CCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHHHHHHHHH-HHHCCCHHHHHHH
T ss_conf             4776---53200255555682776404688821000246527785502879989879999999999-9748981776543


Q ss_pred             ------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH--HHHHHH
Q ss_conf             ------68742233620004899367999999999529899899999999999--999977
Q 002461          828 ------RGDVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT--ELKKCL  880 (919)
Q Consensus       828 ------~~~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~--~Le~~~  880 (919)
                            ...........+...........+.+++.+|+..+|++|||+.|+++  .++++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             HCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf             0621011035544567444431568999999999997658955792999996698452466


No 50 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=0  Score=306.12  Aligned_cols=258  Identities=20%  Similarity=0.283  Sum_probs=197.2

Q ss_pred             HHCCEECEECCEEEEEEEECCCCEEEEEEEECCC--CCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             3314120207479999997699899999950589--98913336899998740376031687676339908999983468
Q 002461          609 NFHRILGKGGFGTVYHGYLADGSEVAIKMLSASS--SQGPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYMAY  686 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~~~  686 (919)
                      +..+.||+|+||+||+|...+|+.||||+++...  ....+.+.+|+.++++++||||+++++++...+..++++|++.+
T Consensus         5 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~   84 (286)
T d1ob3a_           5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ   84 (286)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred             EECCEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEHH
T ss_conf             34318722778189999968999999999812326858999999999999867998687660120467731589974004


Q ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             88234420012346896769999999999999988169999353036433078588984899603764234888787431
Q 002461          687 GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESHIS  766 (919)
Q Consensus       687 GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~~~  766 (919)
                      +.+..+.  ...+.+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+|++|||++.......  ...
T Consensus        85 ~~~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~  157 (286)
T d1ob3a_          85 DLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKY  157 (286)
T ss_dssp             EHHHHHH--TSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred             HHHHHHH--HHCCCCCHHHHHHHHHHHHHHHHHHC---CCCEEECCCCCCEEEECCCCCEEECCCCCCEECCCCC--CCC
T ss_conf             5678998--60477514456899999999999860---5748826787750568689978732366430114676--541


Q ss_pred             CCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC------------C--
Q ss_conf             15545865337443247-88994146899999999999299975348786200012233223687------------4--
Q 002461          767 TSIVGTVGYLDPEYYAS-NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGD------------V--  831 (919)
Q Consensus       767 ~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~------------l--  831 (919)
                      ....++..|+|||.+.. ..++.++||||+||++|||++|+.||....+...+ ..+........            .  
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL-MRIFRILGTPNSKNWPNVTELPKYDP  236 (286)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             CEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHH-HHHHHHHCCCCHHHCCCHHHHHHCCC
T ss_conf             01024311013788717888884100211175899997797998988989999-99998638997110421233322143


Q ss_pred             -CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             -2233620004899367999999999529899899999999999
Q 002461          832 -RSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       832 -~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                       .....+.............+.+++.+|+..+|++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             33335676466651258999999999986689668909999856


No 51 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=309.92  Aligned_cols=242  Identities=24%  Similarity=0.358  Sum_probs=192.6

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCC------CCCHHHHHHHHHHHHCC--CCCEEEEEEEEECCCEEE
Q ss_conf             53314120207479999997-6998999999505899------89133368999987403--760316876763399089
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS------QGPKQFRTEAQLLMRVH--HRNLASLVGYCNDGGNVG  678 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~------~~~~~f~~Ei~~L~~l~--H~NIv~l~g~~~~~~~~~  678 (919)
                      +.+.+.||+|+||+||+|.. .+|+.||||+++....      ....++.+|+.++++++  ||||+++++++.+.+..+
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~   85 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV   85 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEE
T ss_conf             79967984087839999999999979999998568844334556799999999999974358988127999983099689


Q ss_pred             EEEEECCC-CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCC-CCEEEECCCCCCC
Q ss_conf             99983468-882344200123468967699999999999999881699993530364330785889-8489960376423
Q 002461          679 LVYEYMAY-GNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEK-MQAKLADFGFSKI  756 (919)
Q Consensus       679 LV~E~~~~-GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~-~~vkI~DFGla~~  756 (919)
                      +|+|++.+ +++.+++.  ....+++..+..++.|++.||.|||   +.+++||||||+|||++.+ +.+||+|||+++.
T Consensus        86 lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          86 LILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEECCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCEEEECCCCEEEECCCCCCEE
T ss_conf             99983368622899986--1589999999999999999999998---779755667611147744788489775465353


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
Q ss_conf             488878743115545865337443247889-9414689999999999929997534878620001223322368742233
Q 002461          757 FPAESESHISTSIVGTVGYLDPEYYASNRL-TEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIV  835 (919)
Q Consensus       757 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~ii  835 (919)
                      ....    ......||..|+|||++.+..+ +.++||||+||++|||++|+.||....   ....        +..    
T Consensus       161 ~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---~i~~--------~~~----  221 (273)
T d1xwsa_         161 LKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---EIIR--------GQV----  221 (273)
T ss_dssp             CCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---HHHH--------CCC----
T ss_pred             CCCC----CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCH---HHHH--------CCC----
T ss_conf             2444----55665658774799998489978865332554034536756889988736---7761--------544----


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH--HHHHH
Q ss_conf             620004899367999999999529899899999999999--99997
Q 002461          836 DPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT--ELKKC  879 (919)
Q Consensus       836 D~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~--~Le~~  879 (919)
                        .+    .......+.+++.+|+..+|++|||+.|+++  .++++
T Consensus       222 --~~----~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         222 --FF----RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             --CC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             --CC----CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf             --77----87799999999999760897589399998539866788


No 52 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-45  Score=298.37  Aligned_cols=261  Identities=20%  Similarity=0.276  Sum_probs=192.6

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCC--CCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC--------CCE
Q ss_conf             53314120207479999997-699899999950589--9891333689999874037603168767633--------990
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEAQLLMRVHHRNLASLVGYCND--------GGN  676 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~--~~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~--------~~~  676 (919)
                      +...+.||+|+||+||+|.. .+|+.||||++....  .....++.+|+.+|++++|+|++++++.+..        ..+
T Consensus        12 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~   91 (318)
T d3blha1          12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS   91 (318)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------C
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCE
T ss_conf             88999972274829999999899979999998422246378999999999999835999660676540246544445763


Q ss_pred             EEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCC
Q ss_conf             89999834688823442001234689676999999999999998816999935303643307858898489960376423
Q 002461          677 VGLVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKI  756 (919)
Q Consensus       677 ~~LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~  756 (919)
                      .++++|++.++.+....  .....++......++.|++.||.|||   +.+|+||||||+|||++.++.+|++|||+++.
T Consensus        92 ~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~  166 (318)
T d3blha1          92 IYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA  166 (318)
T ss_dssp             EEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEECCCCCCCCHHH--HCCCCCCCHHHHHHHHHHHHHHHHHC---CCCEEECCCCCHHEEECCCCCEEEEECCEEEE
T ss_conf             89998535787410122--20344330899999999999998852---29988567672220366899687631350022


Q ss_pred             CCCCCC--CCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCC---CCC
Q ss_conf             488878--7431155458653374432478-8994146899999999999299975348786200012233223---687
Q 002461          757 FPAESE--SHISTSIVGTVGYLDPEYYASN-RLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLE---RGD  830 (919)
Q Consensus       757 ~~~~~~--~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~---~~~  830 (919)
                      ......  ........||..|+|||++.+. .++.++||||+||++|||++|+.||....+... ...+.....   ...
T Consensus       167 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~  245 (318)
T d3blha1         167 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITPEV  245 (318)
T ss_dssp             CCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTT
T ss_pred             CCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHH-HHHHHHHCCCCCHHH
T ss_conf             3554443211356602497874289970799989178700678646617448799899899999-999998418998255


Q ss_pred             CCCC--------CCCCCCCCCCHH-------HHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             4223--------362000489936-------7999999999529899899999999999
Q 002461          831 VRSI--------VDPRLEANFDTN-------SVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       831 l~~i--------iD~~l~~~~~~~-------~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                      ....        ............       ....+.+++.+|+..+|++|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             34432034443320133445550334044459989999999987389658909999974


No 53 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5.6e-45  Score=297.31  Aligned_cols=260  Identities=21%  Similarity=0.237  Sum_probs=194.1

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEE-EEEEEECCCEEEEEEEECC
Q ss_conf             53314120207479999997-699899999950589989133368999987403760316-8767633990899998346
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLAS-LVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv~-l~g~~~~~~~~~LV~E~~~  685 (919)
                      +.+.+.||+|+||.||+|.. .+|+.||||++....  ...++..|+++++.++|+|++. +.++....+..++|+|++.
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHC--CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECC
T ss_conf             999689850788099999998899899999972100--588899999999970389960179999951987789998738


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEC---CCCCEEEECCCCCCCCCCCCC
Q ss_conf             88823442001234689676999999999999998816999935303643307858---898489960376423488878
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLN---EKMQAKLADFGFSKIFPAESE  762 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld---~~~~vkI~DFGla~~~~~~~~  762 (919)
                       ++|.+.+.. ....+++..+..++.|++.||+|||   +++|+||||||+|||++   .+..+|++|||+++.+.....
T Consensus        87 -~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          87 -PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             -CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             -CCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCCCHHHCCCCCCCCCCEEEEECCCCCEECCCCCC
T ss_conf             -713332443-0688768999999999999999999---79944266787660643357776156504675134255445


Q ss_pred             C-----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
Q ss_conf             7-----43115545865337443247889941468999999999992999753487862000122332236874223362
Q 002461          763 S-----HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVDP  837 (919)
Q Consensus       763 ~-----~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD~  837 (919)
                      .     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.............. . ..... ....+
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~-~-~~~~~-~~~~~  238 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER-I-SEKKM-STPIE  238 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHH-H-HHHHH-HSCHH
T ss_pred             CCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH-H-HCCCC-CCCHH
T ss_conf             541000135776787353299999189989832188617789999849876655305779999998-5-23567-89835


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             00048993679999999995298998999999999999999775
Q 002461          838 RLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       838 ~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                      .+.    ......+.+++..|+..+|++||++.++.+.|+.+..
T Consensus       239 ~~~----~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         239 VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHT----TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHC----CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf             753----4788999999999843995579199999999999999


No 54 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=1.3e-44  Score=294.91  Aligned_cols=258  Identities=18%  Similarity=0.213  Sum_probs=200.3

Q ss_pred             HHHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCC-CCEEEEEEEEECCCEEEEEEEECC
Q ss_conf             533141202074799999976-998999999505899891333689999874037-603168767633990899998346
Q 002461          608 NNFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHH-RNLASLVGYCNDGGNVGLVYEYMA  685 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H-~NIv~l~g~~~~~~~~~LV~E~~~  685 (919)
                      +.+.+.||+|+||+||+|... +|+.||||+++...  ....+.+|++.+..++| +|++.+++++......++|+|++ 
T Consensus         7 Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-   83 (293)
T d1csna_           7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-   83 (293)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEC-
T ss_conf             699799841788299999998899799999975025--82999999999999648999877999960188117999964-


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECC-----CCCEEEECCCCCCCCCCC
Q ss_conf             888234420012346896769999999999999988169999353036433078588-----984899603764234888
Q 002461          686 YGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNE-----KMQAKLADFGFSKIFPAE  760 (919)
Q Consensus       686 ~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~-----~~~vkI~DFGla~~~~~~  760 (919)
                      +++|.+++.. ....+++.....++.|++.||.|||   +.+++||||||+|||++.     ++.+||+|||+++.+...
T Consensus        84 ~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~  159 (293)
T d1csna_          84 GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  159 (293)
T ss_dssp             CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             CCCHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHH---HCCCEECCCCCCCEEECCCCCCCCCCEEECCCCEEEECCCC
T ss_conf             8887999975-2031106899999999999999999---77966266771315234754344795687236605771467


Q ss_pred             CCC-----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH--HCCCCCCCCCCCCCC
Q ss_conf             787-----4311554586533744324788994146899999999999299975348786200--012233223687422
Q 002461          761 SES-----HISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHI--VNRVCPFLERGDVRS  833 (919)
Q Consensus       761 ~~~-----~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~l--v~~v~~~~~~~~l~~  833 (919)
                      ...     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........  ...+.........  
T Consensus       160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--  237 (293)
T d1csna_         160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL--  237 (293)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--
T ss_pred             CCCCCEEECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCH--
T ss_conf             665411102467627751026798964888886999898319999998698767885302199999999705679995--


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             336200048993679999999995298998999999999999999775
Q 002461          834 IVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVTELKKCLE  881 (919)
Q Consensus       834 iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~~Le~~~~  881 (919)
                         +.+..    ..+..+.+++..|+..+|++||+++.+.+.|+++++
T Consensus       238 ---~~l~~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         238 ---RELCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             ---HHHTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ---HHHCC----CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             ---89657----998999999999843993008599999999999999


No 55 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-44  Score=294.89  Aligned_cols=260  Identities=20%  Similarity=0.269  Sum_probs=200.3

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC--CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEEC
Q ss_conf             53314120207479999997-69989999995058998--9133368999987403760316876763399089999834
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ--GPKQFRTEAQLLMRVHHRNLASLVGYCNDGGNVGLVYEYM  684 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~--~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~~~~LV~E~~  684 (919)
                      ++..+.||+|+||+||+|+. .+++.||||+++.....  ....+.+|+.+++.++|+||+++++++......+++++++
T Consensus         4 y~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~   83 (292)
T d1unla_           4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEC
T ss_conf             78626971286819999999999969999998032178689999999999998567578882135444443115886302


Q ss_pred             CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             68882344200123468967699999999999999881699993530364330785889848996037642348887874
Q 002461          685 AYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAESESH  764 (919)
Q Consensus       685 ~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~~~~  764 (919)
                      .++.|..++.  ..+.+++..+..++.|++.||+|||   +.+|+||||||+|||++.+..+||+|||.++......  .
T Consensus        84 ~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~--~  156 (292)
T d1unla_          84 DQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--R  156 (292)
T ss_dssp             SEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC--S
T ss_pred             CCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHH---CCCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCC--C
T ss_conf             3322211212--3565403678999999999987743---3998600146761211337826652046011046887--5


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC---C---CCCCC-
Q ss_conf             311554586533744324788-994146899999999999299975348786200012233223687---4---22336-
Q 002461          765 ISTSIVGTVGYLDPEYYASNR-LTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGD---V---RSIVD-  836 (919)
Q Consensus       765 ~~~~~~gt~~Y~APE~l~~~~-~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~---l---~~iiD-  836 (919)
                      ......++..|+|||.+.... ++.++||||+||++|||++|+.||..+.+..+....+........   .   ....+ 
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (292)
T d1unla_         157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             CCEEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
T ss_conf             10010344310146675069888804440265418899851899998899999999999861189973551344322211


Q ss_pred             --------CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             --------20004899367999999999529899899999999999
Q 002461          837 --------PRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       837 --------~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                              ..-...........+.+++.+|++.+|++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             3344454431043306568999999999986499668909999964


No 56 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-45  Score=297.85  Aligned_cols=250  Identities=23%  Similarity=0.324  Sum_probs=196.2

Q ss_pred             HHHCCEECEECCEEEEEEEEC----CCCEEEEEEEECC----CCCCCHHHHHHHHHHHHCCC-CCEEEEEEEEECCCEEE
Q ss_conf             533141202074799999976----9989999995058----99891333689999874037-60316876763399089
Q 002461          608 NNFHRILGKGGFGTVYHGYLA----DGSEVAIKMLSAS----SSQGPKQFRTEAQLLMRVHH-RNLASLVGYCNDGGNVG  678 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~~----~g~~VAVK~l~~~----~~~~~~~f~~Ei~~L~~l~H-~NIv~l~g~~~~~~~~~  678 (919)
                      +++.+.||+|+||+||+|...    +|+.||+|+++..    .....+.+.+|+.++++++| +||+++++++.+....+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEE
T ss_conf             59998983287839999998765887948999998367721016899999999999986467983999620002487300


Q ss_pred             EEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCC
Q ss_conf             99983468882344200123468967699999999999999881699993530364330785889848996037642348
Q 002461          679 LVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFP  758 (919)
Q Consensus       679 LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~  758 (919)
                      +++||+.+|+|.+++..  ...+.......++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.+.
T Consensus       106 ~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEECCCCCHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHH---CCCEEECCCCCCCEEECCCCCEEEEECCCHHHHC
T ss_conf             12312341179999873--045437888888999999998851---4998965477320124699988874132022203


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
Q ss_conf             88787431155458653374432478--8994146899999999999299975348786200012233223687422336
Q 002461          759 AESESHISTSIVGTVGYLDPEYYASN--RLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVRSIVD  836 (919)
Q Consensus       759 ~~~~~~~~~~~~gt~~Y~APE~l~~~--~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~~iiD  836 (919)
                      .. .........|+..|+|||.+.+.  .++.++||||+||++|||++|+.||................ ...       
T Consensus       181 ~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~-~~~-------  251 (322)
T d1vzoa_         181 AD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI-LKS-------  251 (322)
T ss_dssp             GG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH-HHC-------
T ss_pred             CC-CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC-CCC-------
T ss_conf             44-443221222333331068760577688713251777799999976899988887777999999833-568-------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHH
Q ss_conf             20004899367999999999529899899999-----999999
Q 002461          837 PRLEANFDTNSVWKVAETAMECVPSISFQRPT-----MSHVVT  874 (919)
Q Consensus       837 ~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPs-----m~eVv~  874 (919)
                         ....+......+.+++.+|+..+|++||+     ++|+++
T Consensus       252 ---~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         252 ---EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ---CCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHC
T ss_conf             ---9988654799999999997445898819997450999974


No 57 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1.8e-44  Score=293.88  Aligned_cols=254  Identities=19%  Similarity=0.296  Sum_probs=192.6

Q ss_pred             HHHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC-CCCEEEEEEEEEC--CCEEEEEEE
Q ss_conf             753314120207479999997-699899999950589989133368999987403-7603168767633--990899998
Q 002461          607 TNNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVH-HRNLASLVGYCND--GGNVGLVYE  682 (919)
Q Consensus       607 t~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~-H~NIv~l~g~~~~--~~~~~LV~E  682 (919)
                      .+.+.+.||+|+||+||+|+. .+|+.||+|+++..   ..+++.+|+.+|+.++ ||||+++++++..  ....++|||
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEE
T ss_conf             718978983174819999998899979999998889---99999999999985157998767999998168771268886


Q ss_pred             ECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC-CEEEECCCCCCCCCCCC
Q ss_conf             34688823442001234689676999999999999998816999935303643307858898-48996037642348887
Q 002461          683 YMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKM-QAKLADFGFSKIFPAES  761 (919)
Q Consensus       683 ~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~-~vkI~DFGla~~~~~~~  761 (919)
                      |+.+++|....     +.+++..+..++.|++.||.|||   +.+|+||||||+|||++.+. .+||+|||+++......
T Consensus       113 ~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~  184 (328)
T d3bqca1         113 HVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  184 (328)
T ss_dssp             CCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred             ECCCCCHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCEEECCCCCEEEECCCCCCEECCCCC
T ss_conf             31798589974-----68999999999999999998876---43344345644123774899836641565426646887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCC---------C--
Q ss_conf             87431155458653374432478-89941468999999999992999753487862000122332236---------8--
Q 002461          762 ESHISTSIVGTVGYLDPEYYASN-RLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLER---------G--  829 (919)
Q Consensus       762 ~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~---------~--  829 (919)
                         ......+|..|+|||.+.+. .++.++||||+|++++||++|+.||....+..+....+......         .  
T Consensus       185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~  261 (328)
T d3bqca1         185 ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  261 (328)
T ss_dssp             ---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCC
T ss_conf             ---44432248642476102688888845232335455587604889998876018999999998788415555542254


Q ss_pred             ----CCCCCC--------CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             ----742233--------620004899367999999999529899899999999999
Q 002461          830 ----DVRSIV--------DPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       830 ----~l~~ii--------D~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                          ......        ...............+.+++.+|+..+|++|||++|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             447430000033343311211552112448999999999986699568908999964


No 58 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-45  Score=299.18  Aligned_cols=260  Identities=21%  Similarity=0.296  Sum_probs=190.4

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCC-CCCHHHHHHHHHHHHCCCCCEEEEEEEEECCC----EEEEEE
Q ss_conf             53314120207479999997-6998999999505899-89133368999987403760316876763399----089999
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QGPKQFRTEAQLLMRVHHRNLASLVGYCNDGG----NVGLVY  681 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~-~~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~----~~~LV~  681 (919)
                      +...+.||+|+||+||+|.. .+|+.||||+++.... ...+.+.+|+.+|+.++|||++++++++....    ..++++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~   89 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV   89 (345)
T ss_dssp             EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred             EEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf             59978994064809999999999949999998031095899999999999997689898858889950564554149999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             83468882344200123468967699999999999999881699993530364330785889848996037642348887
Q 002461          682 EYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPAES  761 (919)
Q Consensus       682 E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~~~  761 (919)
                      +++.+|+|.+++..   ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        90 ~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~  163 (345)
T d1pmea_          90 THLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  163 (345)
T ss_dssp             EECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEECCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCC
T ss_conf             96259865664405---89999999999999999999999---7898677787643788799977875457056504777


Q ss_pred             C-CCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCC-------
Q ss_conf             8-743115545865337443247-8899414689999999999929997534878620001223322368742-------
Q 002461          762 E-SHISTSIVGTVGYLDPEYYAS-NRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGDVR-------  832 (919)
Q Consensus       762 ~-~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~l~-------  832 (919)
                      . ........|+..|+|||++.. ..++.++||||+||+++||++|+.||........ ..............       
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHTCCC
T ss_pred             CCCEEECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHH-HHHHHHHCCCCCHHHHHHHHH
T ss_conf             6410101102652000387860478887410100467013377669799788888999-998765206997566423433


Q ss_pred             ----CC--CCCCCCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             ----23--3620004----899367999999999529899899999999999
Q 002461          833 ----SI--VDPRLEA----NFDTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       833 ----~i--iD~~l~~----~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                          ..  ..+....    .........+.+++.+|+..+|++||++.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             2222024467755778777837899999999999976489567908999861


No 59 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.4e-45  Score=296.09  Aligned_cols=258  Identities=24%  Similarity=0.287  Sum_probs=192.6

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC--CCHHHHHHHHHHHHCCCCCEEEEEEEEECCC------EEE
Q ss_conf             53314120207479999997-69989999995058998--9133368999987403760316876763399------089
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ--GPKQFRTEAQLLMRVHHRNLASLVGYCNDGG------NVG  678 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~--~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~~------~~~  678 (919)
                      +...+.||+|+||+||+|.. .+|+.||||+++.....  ..+.+.+|+.+|+.++||||+++++++...+      +.+
T Consensus        20 Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~   99 (346)
T d1cm8a_          20 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY   99 (346)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEE
T ss_conf             89988980177819999999999989999998522259699999999999998668987547999863576555541599


Q ss_pred             EEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCC
Q ss_conf             99983468882344200123468967699999999999999881699993530364330785889848996037642348
Q 002461          679 LVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFP  758 (919)
Q Consensus       679 LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~  758 (919)
                      +|+||+ +.+|.....   ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+|++|||+++...
T Consensus       100 lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_         100 LVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             EEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEECC-CCCHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCC
T ss_conf             998405-521899987---402269999999999999999987---3787645668511112100122113431022068


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC-------
Q ss_conf             88787431155458653374432478-8994146899999999999299975348786200012233223687-------
Q 002461          759 AESESHISTSIVGTVGYLDPEYYASN-RLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERGD-------  830 (919)
Q Consensus       759 ~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~~-------  830 (919)
                      ..     .+...|+..|+|||.+.+. .++.++||||+||++|||++|++||........+.... .......       
T Consensus       173 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~  246 (346)
T d1cm8a_         173 SE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM-KVTGTPPAEFVQRL  246 (346)
T ss_dssp             SS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HHHCCCCHHHHHTC
T ss_pred             CC-----CCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHH-HCCCCCCHHHHHHH
T ss_conf             76-----3102455333588998178789965010300389999997869988897689999998-50378848888653


Q ss_pred             -----------CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH--HHHHH
Q ss_conf             -----------42233620004899367999999999529899899999999999--99997
Q 002461          831 -----------VRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT--ELKKC  879 (919)
Q Consensus       831 -----------l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~--~Le~~  879 (919)
                                 +.+.....+.. ........+.+++.+|+..+|.+|||+.|+++  .++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         247 QSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             SCHHHHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             CCHHHHHHHCCCCCCCCCCHHH-HCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf             0003443311578666556677-556899999999999772995579299999639623758


No 60 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.1e-44  Score=289.49  Aligned_cols=254  Identities=24%  Similarity=0.240  Sum_probs=191.8

Q ss_pred             HHCCEECEECCEEEEEEEEC-CCCEEEEEEEECCCCC--CCHHHHHHHHHHHHCCCCCEEEEEEEEEC------CCEEEE
Q ss_conf             33141202074799999976-9989999995058998--91333689999874037603168767633------990899
Q 002461          609 NFHRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ--GPKQFRTEAQLLMRVHHRNLASLVGYCND------GGNVGL  679 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~-~g~~VAVK~l~~~~~~--~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~------~~~~~L  679 (919)
                      ...++||+|+||+||+|... +|+.||||+++.....  ....+.+|+.+++.++||||+++++++..      ..+.++
T Consensus        20 ~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~i   99 (355)
T d2b1pa1          20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL   99 (355)
T ss_dssp             EEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred             EEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEE
T ss_conf             99889621758599999999999899999988233697999999999999986489876489989702564345762699


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCC
Q ss_conf             99834688823442001234689676999999999999998816999935303643307858898489960376423488
Q 002461          680 VYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPA  759 (919)
Q Consensus       680 V~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~  759 (919)
                      |+||+.++ +.+.+.    ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.+..+|++|||+++....
T Consensus       100 v~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1         100 VMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             EEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEECCCHH-HHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCEEEECHHHHHCCCC
T ss_conf             98414467-787650----38999999999999999998865---22112456776321136544313201023211466


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCC------------
Q ss_conf             87874311554586533744324788994146899999999999299975348786200012233223------------
Q 002461          760 ESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLE------------  827 (919)
Q Consensus       760 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~------------  827 (919)
                         ........+|..|+|||++.+..++.++||||+||+++||++|+.||....+.... ..+.....            
T Consensus       172 ---~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~  247 (355)
T d2b1pa1         172 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW-NKVIEQLGTPCPEFMKKLQP  247 (355)
T ss_dssp             ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHHHCCCCHHHHTTSCH
T ss_pred             ---CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHH-HHHHHHCCCCCHHHHHHHHH
T ss_conf             ---65533221465555813314777787743335662578986598998889778899-99997205898799987656


Q ss_pred             -------C------CCCCCCCCCCCCCCC---CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             -------6------874223362000489---9367999999999529899899999999999
Q 002461          828 -------R------GDVRSIVDPRLEANF---DTNSVWKVAETAMECVPSISFQRPTMSHVVT  874 (919)
Q Consensus       828 -------~------~~l~~iiD~~l~~~~---~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~  874 (919)
                             .      ......+........   .......+.+++.+|+..+|++|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             677776417543566642126433354321013337999999999987699457908999966


No 61 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-43  Score=286.32  Aligned_cols=258  Identities=21%  Similarity=0.249  Sum_probs=190.8

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCC--CCHHHHHHHHHHHHCCCCCEEEEEEEEECC-----CEEEE
Q ss_conf             53314120207479999997-69989999995058998--913336899998740376031687676339-----90899
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ--GPKQFRTEAQLLMRVHHRNLASLVGYCNDG-----GNVGL  679 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~--~~~~f~~Ei~~L~~l~H~NIv~l~g~~~~~-----~~~~L  679 (919)
                      +...+.||+|+||+||+|.. .+|+.||||+++.....  ..+.+.+|+.+|+.++|+|++++++++...     ...++
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~   99 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY   99 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEE
T ss_conf             18888983178839999999999979999998820028689999999999998668987425999996346456686499


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCCC
Q ss_conf             99834688823442001234689676999999999999998816999935303643307858898489960376423488
Q 002461          680 VYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKIFPA  759 (919)
Q Consensus       680 V~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~~~~  759 (919)
                      +++++.+|+|.+++..   +.+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+|++|||++.....
T Consensus       100 i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1         100 LVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             EEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             EEEEECCCCHHHHCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
T ss_conf             9996258862320022---45309999999999999999997---38876516677633455432200132100012575


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCC---------
Q ss_conf             8787431155458653374432478-899414689999999999929997534878620001223322368---------
Q 002461          760 ESESHISTSIVGTVGYLDPEYYASN-RLTEKSDVYSFGIVLLELITGLPAIIRGYNNTHIVNRVCPFLERG---------  829 (919)
Q Consensus       760 ~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~~lv~~v~~~~~~~---------  829 (919)
                           ......|+..|+|||...+. .++.++||||+||++|+|++|+.||...... .....+.......         
T Consensus       174 -----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~  247 (348)
T d2gfsa1         174 -----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKIS  247 (348)
T ss_dssp             -----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTTCC
T ss_pred             -----CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHCCCCCHHHHHHCC
T ss_conf             -----4444345435558355337756785512432058999997688997889889-9999999730799757732001


Q ss_pred             ---------CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH--HHHH
Q ss_conf             ---------742233620004899367999999999529899899999999999--9999
Q 002461          830 ---------DVRSIVDPRLEANFDTNSVWKVAETAMECVPSISFQRPTMSHVVT--ELKK  878 (919)
Q Consensus       830 ---------~l~~iiD~~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eVv~--~Le~  878 (919)
                               .........+... .......+.+++.+|+..+|++|||+.|+++  .+.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         248 SESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHH-STTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CHHHHHHHHHCCCCCCCCHHHH-CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCC
T ss_conf             0244544430355787555662-6789999999999977588345938999855995487


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3e-39  Score=261.07  Aligned_cols=263  Identities=22%  Similarity=0.296  Sum_probs=188.1

Q ss_pred             HHHCCEECEECCEEEEEEEE-CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC-----------CCCEEEEEEEEEC--
Q ss_conf             53314120207479999997-699899999950589989133368999987403-----------7603168767633--
Q 002461          608 NNFHRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVH-----------HRNLASLVGYCND--  673 (919)
Q Consensus       608 ~~f~~~LG~G~fG~Vyka~~-~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~-----------H~NIv~l~g~~~~--  673 (919)
                      +.+.+.||+|+||+||+|+. .+|+.||||+++... .....+.+|+.+++.++           |+||+++++++..  
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             EEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCC-CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEECC
T ss_conf             799899750778189999999999799999983431-3368999999999984014555554227676478998763125


Q ss_pred             CCEEEEEEEECCCCC-HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC------CE
Q ss_conf             990899998346888-23442001234689676999999999999998816999935303643307858898------48
Q 002461          674 GGNVGLVYEYMAYGN-LKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKM------QA  746 (919)
Q Consensus       674 ~~~~~LV~E~~~~Gs-L~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~------~v  746 (919)
                      .....++++++..+. ............+.+..+..++.|++.||.|||+  ..+|+||||||+|||++.++      .+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~  171 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQI  171 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCCHHHEEEECCCCCCCCCEE
T ss_conf             65202343200035420000012234678689999999999999888764--0586465677057056305765644305


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC------CHHC
Q ss_conf             9960376423488878743115545865337443247889941468999999999992999753487862------0001
Q 002461          747 KLADFGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLLELITGLPAIIRGYNNT------HIVN  820 (919)
Q Consensus       747 kI~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ELltG~~p~~~~~~~~------~lv~  820 (919)
                      +++|||.+.....     ......|+..|+|||++....++.++||||+||+++||++|+.||.......      .+..
T Consensus       172 kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         172 KIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             EEEECCCCCCCCC-----CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             6753144212344-----54223665210571321466777643201237899999878899898755432102689999


Q ss_pred             CCCCCCCC------------------C----CCCCC----CCC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf             22332236------------------8----74223----362--00048993679999999995298998999999999
Q 002461          821 RVCPFLER------------------G----DVRSI----VDP--RLEANFDTNSVWKVAETAMECVPSISFQRPTMSHV  872 (919)
Q Consensus       821 ~v~~~~~~------------------~----~l~~i----iD~--~l~~~~~~~~~~~l~~li~~Cl~~~P~~RPsm~eV  872 (919)
                      .+. .+..                  .    .+...    ...  .............+.+++.+|+..+|.+|||++|+
T Consensus       247 ~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         247 IIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHH-HHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             999-8379987886245322000132012202432357764442100015674358999999999877994579089999


Q ss_pred             HH--HHHHH
Q ss_conf             99--99997
Q 002461          873 VT--ELKKC  879 (919)
Q Consensus       873 v~--~Le~~  879 (919)
                      ++  .+++.
T Consensus       326 L~Hp~f~~~  334 (362)
T d1q8ya_         326 VNHPWLKDT  334 (362)
T ss_dssp             HTCGGGTTC
T ss_pred             HCCCCCCCC
T ss_conf             669340789


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.87  E-value=4.6e-22  Score=153.10  Aligned_cols=170  Identities=16%  Similarity=0.209  Sum_probs=117.4

Q ss_pred             HHCCEECEECCEEEEEEEECCCCEEEEEEEECCCCC-----C-------------CHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf             331412020747999999769989999995058998-----9-------------1333689999874037603168767
Q 002461          609 NFHRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQ-----G-------------PKQFRTEAQLLMRVHHRNLASLVGY  670 (919)
Q Consensus       609 ~f~~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~-----~-------------~~~f~~Ei~~L~~l~H~NIv~l~g~  670 (919)
                      .+.+.||+|+||+||+|...+|+.||||+++.....     .             ......|...+.++.|.+++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             HHCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             22778024856599999979999999999860443466655656300088899999977899999998169991449986


Q ss_pred             EECCCEEEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEEC
Q ss_conf             63399089999834688823442001234689676999999999999998816999935303643307858898489960
Q 002461          671 CNDGGNVGLVYEYMAYGNLKQYLFDETKEALSWKDRLQIAVDAAQGLEYLHHGCKPPIIHRDVKTANILLNEKMQAKLAD  750 (919)
Q Consensus       671 ~~~~~~~~LV~E~~~~GsL~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~~~~iiH~DLKp~NILld~~~~vkI~D  750 (919)
                      ..    .+++||++++..+.+         ++......++.|+++++.|||   +.+++|+||||+|||++++ .++|+|
T Consensus        83 ~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liD  145 (191)
T d1zara2          83 EG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIID  145 (191)
T ss_dssp             ET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECC
T ss_pred             CC----CEEEEEEECCCCCCC---------HHHHHHHHHHHHHHHHHHHHH---HCCEEECCCCHHHEEEECC-CEEEEE
T ss_conf             28----889999504565420---------015789999999999999982---6888983689036114289-899987


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             37642348887874311554586533744324788994146899999999
Q 002461          751 FGFSKIFPAESESHISTSIVGTVGYLDPEYYASNRLTEKSDVYSFGIVLL  800 (919)
Q Consensus       751 FGla~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGviL~  800 (919)
                      ||++...........   ....... -.+.+ ...+..++|+||..--++
T Consensus       146 FG~a~~~~~~~~~~~---l~rd~~~-~~~~f-~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         146 FPQSVEVGEEGWREI---LERDVRN-IITYF-SRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             CTTCEETTSTTHHHH---HHHHHHH-HHHHH-HHHHCCCCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHH---HHHHHHH-HHHHH-CCCCCCCCCHHHHHHHHH
T ss_conf             788430899870999---9877999-99997-578998446899999874


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.84  E-value=2.4e-21  Score=148.62  Aligned_cols=126  Identities=27%  Similarity=0.431  Sum_probs=108.5

Q ss_pred             CCCHHHHHHHHHHHHHCCC---CCCCC-C-CCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCC--CCCCCCCCCCC
Q ss_conf             9996579999999986899---99999-9-9999988842388808999899958999910699732--16712228899
Q 002461          399 PTDQDDVNAIMDIKLSYDL---GKGWQ-G-DPCSPMYYSWDGLNCSYNGYKPPKIISLNLTSEGLTG--KISPSLSNLKS  471 (919)
Q Consensus       399 ~t~~~d~~al~~~k~~~~~---~~~W~-g-dpC~~~~~~W~gv~C~~~~~~~~~i~~l~L~~n~l~G--~ip~~~~~l~~  471 (919)
                      =|.++|++||++||+.+..   ..+|. + |+|.   +.|+||+|+..+ ...||+.|+|++++++|  .||+++++|++
T Consensus         2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~---~~w~gv~C~~~~-~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~   77 (313)
T d1ogqa_           2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN---RTWLGVLCDTDT-QTYRVNNLDLSGLNLPKPYPIPSSLANLPY   77 (313)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT---TCSTTEEECCSS-SCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CCCCCEEEECCC-CCEEEEEEECCCCCCCCCCCCCHHHHCCCC
T ss_conf             9898999999999997799986778899999988---948896974899-947988998989988888879847846753


Q ss_pred             CCEEECCC-CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98897768-8556677945899997309994799888987642000023685432468
Q 002461          472 LENLDLSN-NSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLLSIG  528 (919)
Q Consensus       472 L~~L~Ls~-N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls~~  528 (919)
                      |+.|+|++ |+++|.||.++++|++|++|+|++|++.|.+|..+..+..+..++++.+
T Consensus        78 L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N  135 (313)
T d1ogqa_          78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN  135 (313)
T ss_dssp             CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCC
T ss_conf             3520202654333002431145420011020356434433222220111001111224


No 65 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.33  E-value=3.6e-13  Score=97.23  Aligned_cols=92  Identities=28%  Similarity=0.411  Sum_probs=79.4

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420000236854
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSL  523 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l  523 (919)
                      ..+.+..++++++.+.|.+| +++.+++|+.|+|++|+|+|.||..+++|++|+.|+|++|+|+|.||. ++++.++.. 
T Consensus       219 ~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~-  295 (313)
T d1ogqa_         219 SDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDV-  295 (313)
T ss_dssp             TTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCG-
T ss_pred             CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCC-CCCCCCCCH-
T ss_conf             22221112222222222222-222455444444765706660876884799999897958835166898-666799897-


Q ss_pred             CCCCCCCCCCCCC--CCC
Q ss_conf             3246889898889--874
Q 002461          524 LLSIGRNPDLCLS--APC  539 (919)
Q Consensus       524 ~ls~~~N~~lc~~--~~c  539 (919)
                       +++.+|+.+||.  ++|
T Consensus       296 -l~l~~N~~l~g~plp~c  312 (313)
T d1ogqa_         296 -SAYANNKCLCGSPLPAC  312 (313)
T ss_dssp             -GGTCSSSEEESTTSSCC
T ss_pred             -HHHCCCCCCCCCCCCCC
T ss_conf             -88688950019898898


No 66 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.28  E-value=7.2e-12  Score=89.02  Aligned_cols=99  Identities=23%  Similarity=0.244  Sum_probs=81.9

Q ss_pred             CCEEEEECCCCC------CCCCCEEEEEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf             842388808999------899958999910699732167-1222889998897768855667794589999730999479
Q 002461          431 YSWDGLNCSYNG------YKPPKIISLNLTSEGLTGKIS-PSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDG  503 (919)
Q Consensus       431 ~~W~gv~C~~~~------~~~~~i~~l~L~~n~l~G~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~  503 (919)
                      |+|..|.|+..+      ..|+.++.|+|++|.|++.++ ..|.++++|+.|+|++|++.+..+..+..+++|+.|+|++
T Consensus         8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_           8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             ECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf             76999997089967029898978788984898775530200257876272130136322121212221122221010035


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98889876420000236854324688
Q 002461          504 NKLSGSVPTSLVARSQNGSLLLSIGR  529 (919)
Q Consensus       504 N~l~G~iP~~l~~~~~l~~l~ls~~~  529 (919)
                      |++++..|..+..++++..|+|+.+.
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~  113 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQ  113 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSC
T ss_pred             CCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf             53443497998079746552457745


No 67 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09  E-value=2.6e-10  Score=79.22  Aligned_cols=107  Identities=27%  Similarity=0.358  Sum_probs=82.4

Q ss_pred             CCCCCCCCCEEEEECCCCCC--------CCCCEEEEEEECCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf             99999888423888089998--------99958999910699-7321671222889998897768855667794589999
Q 002461          424 DPCSPMYYSWDGLNCSYNGY--------KPPKIISLNLTSEG-LTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLP  494 (919)
Q Consensus       424 dpC~~~~~~W~gv~C~~~~~--------~~~~i~~l~L~~n~-l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~  494 (919)
                      +.|++.  .+++|+|+..+.        ..++++.|+|.+|+ |+..-+..|.+|++|+.|+|++|+|+.--|..|..++
T Consensus         3 ~~C~c~--~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~   80 (156)
T d2ifga3           3 DACCPH--GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTP   80 (156)
T ss_dssp             SSSCCS--SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCS
T ss_pred             CCCCCC--CCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf             978869--999698528997658600257656574316898664436921225666667216202124774201112455


Q ss_pred             CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             73099947998889876420000236854324688989888
Q 002461          495 LLRVLNLDGNKLSGSVPTSLVARSQNGSLLLSIGRNPDLCL  535 (919)
Q Consensus       495 ~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls~~~N~~lc~  535 (919)
                      +|+.|+|++|+++ .+|.......++.  .+.+.+||.-|.
T Consensus        81 ~L~~L~Ls~N~l~-~l~~~~~~~~~l~--~L~L~~Np~~C~  118 (156)
T d2ifga3          81 RLSRLNLSFNALE-SLSWKTVQGLSLQ--ELVLSGNPLHCS  118 (156)
T ss_dssp             CCCEEECCSSCCS-CCCSTTTCSCCCC--EEECCSSCCCCC
T ss_pred             CCCCEECCCCCCC-CCCHHHHCCCCCC--CCCCCCCCCCCC
T ss_conf             4333322678785-1574563353212--433579863388


No 68 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.02  E-value=3e-10  Score=78.87  Aligned_cols=90  Identities=26%  Similarity=0.385  Sum_probs=78.3

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420000236854
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSL  523 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l  523 (919)
                      ..++++.|+|++|.+.+..+..+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..++++..+
T Consensus        52 ~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l  131 (192)
T d1w8aa_          52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL  131 (192)
T ss_dssp             GCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred             CCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
T ss_conf             87627213013632212121222112222101003553443497998079746552457745353597785687533420


Q ss_pred             CCCCCCCCCCCC
Q ss_conf             324688989888
Q 002461          524 LLSIGRNPDLCL  535 (919)
Q Consensus       524 ~ls~~~N~~lc~  535 (919)
                        .+.+|+..|.
T Consensus       132 --~L~~N~~~~~  141 (192)
T d1w8aa_         132 --NLASNPFNCN  141 (192)
T ss_dssp             --ECTTCCBCCS
T ss_pred             --CCCCCCCCCC
T ss_conf             --0036443435


No 69 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00  E-value=6.7e-10  Score=76.65  Aligned_cols=89  Identities=27%  Similarity=0.269  Sum_probs=69.1

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420000236854
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSL  523 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l  523 (919)
                      ...++..|++++|.+.+..+..+..+++|+.|++++|++++..|..+..+++|+.|+|++|+|+ .+|..+..+.++.. 
T Consensus       122 ~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~-  199 (266)
T d1p9ag_         122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPF-  199 (266)
T ss_dssp             TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSE-
T ss_pred             CCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCE-
T ss_conf             2211112212434210221233322111000000015652237200134212423430139785-56866777888999-


Q ss_pred             CCCCCCCCCCCC
Q ss_conf             324688989888
Q 002461          524 LLSIGRNPDLCL  535 (919)
Q Consensus       524 ~ls~~~N~~lc~  535 (919)
                       +.+.+||+.|.
T Consensus       200 -L~L~~Np~~Cd  210 (266)
T d1p9ag_         200 -AFLHGNPWLCN  210 (266)
T ss_dssp             -EECCSCCBCCS
T ss_pred             -EEECCCCCCCC
T ss_conf             -98369998788


No 70 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93  E-value=1.9e-09  Score=73.76  Aligned_cols=97  Identities=26%  Similarity=0.268  Sum_probs=79.1

Q ss_pred             EEEECCCCC------CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf             388808999------89995899991069973216712228899988977688556677945899997309994799888
Q 002461          434 DGLNCSYNG------YKPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS  507 (919)
Q Consensus       434 ~gv~C~~~~------~~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~  507 (919)
                      .-|+|+..+      ..|+.++.|+|++|.|++..+..|.++++|+.|+|++|+|+ .+|. ++.+++|+.|+|++|+++
T Consensus        13 ~~v~C~~~~L~~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~-~~~l~~L~~L~Ls~N~l~   90 (266)
T d1p9ag_          13 LEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPVLGTLDLSHNQLQ   90 (266)
T ss_dssp             CEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC-CSCCTTCCEEECCSSCCS
T ss_pred             EEEECCCCCCCEECCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCC
T ss_conf             69980699988619675768898988499289859778634565522135665444-4311-111223211111222221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98764200002368543246889898
Q 002461          508 GSVPTSLVARSQNGSLLLSIGRNPDL  533 (919)
Q Consensus       508 G~iP~~l~~~~~l~~l~ls~~~N~~l  533 (919)
                       .+|..+..++++..++++.+....+
T Consensus        91 -~~~~~~~~l~~L~~L~l~~~~~~~~  115 (266)
T d1p9ag_          91 -SLPLLGQTLPALTVLDVSFNRLTSL  115 (266)
T ss_dssp             -SCCCCTTTCTTCCEEECCSSCCCCC
T ss_pred             -CCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             -1111212222222222222311011


No 71 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.91  E-value=5.2e-09  Score=71.07  Aligned_cols=84  Identities=29%  Similarity=0.376  Sum_probs=66.3

Q ss_pred             CCEEEEECCCCC------CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf             842388808999------89995899991069973216712228899988977688556677945899997309994799
Q 002461          431 YSWDGLNCSYNG------YKPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGN  504 (919)
Q Consensus       431 ~~W~gv~C~~~~------~~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N  504 (919)
                      |.|++|+|+..+      ..++.++.|+|++|+|+...+..|.++++|+.|++++|.+....|..+..+++|+.|+|++|
T Consensus        10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n   89 (305)
T d1xkua_          10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN   89 (305)
T ss_dssp             EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred             ECCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCC
T ss_conf             55999985599988519888999798978499189869657604656523112344344523566527985578315687


Q ss_pred             CCCCCCCCCCC
Q ss_conf             88898764200
Q 002461          505 KLSGSVPTSLV  515 (919)
Q Consensus       505 ~l~G~iP~~l~  515 (919)
                      +++ .+|..+.
T Consensus        90 ~l~-~l~~~~~   99 (305)
T d1xkua_          90 QLK-ELPEKMP   99 (305)
T ss_dssp             CCS-BCCSSCC
T ss_pred             CCC-CCCCCHH
T ss_conf             567-6764001


No 72 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89  E-value=1.3e-09  Score=74.83  Aligned_cols=89  Identities=24%  Similarity=0.251  Sum_probs=78.8

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99589999106997321671222889998897768855667794589999730999479988898764200002368543
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLL  524 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~  524 (919)
                      .+.++.|+|++|+|++..+..|.++++|+.|+|++|++++..|..+..+++|+.|++++|++.+..|..+..+.++..  
T Consensus       152 ~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~--  229 (284)
T d1ozna_         152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY--  229 (284)
T ss_dssp             CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE--
T ss_pred             CCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE--
T ss_conf             340502231417656625666546563413142114346628167665320002333335221000002355465688--


Q ss_pred             CCCCCCCCCCC
Q ss_conf             24688989888
Q 002461          525 LSIGRNPDLCL  535 (919)
Q Consensus       525 ls~~~N~~lc~  535 (919)
                      +.+++||..|.
T Consensus       230 L~l~~N~l~C~  240 (284)
T d1ozna_         230 LRLNDNPWVCD  240 (284)
T ss_dssp             EECCSSCEECS
T ss_pred             EEECCCCCCCC
T ss_conf             98119988787


No 73 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.72  E-value=1.7e-08  Score=67.79  Aligned_cols=82  Identities=30%  Similarity=0.385  Sum_probs=59.9

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf             995899991069973216712228899988977688556677945899997309994799888987-6420000236854
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSV-PTSLVARSQNGSL  523 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~i-P~~l~~~~~l~~l  523 (919)
                      .+.++.|+|++|.|+ .+|+.++.+++|+.|+|++|.++ .+|. +..+++|+.|++++|+++... +..+..++++..+
T Consensus        19 l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~-~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L   95 (124)
T d1dcea3          19 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL   95 (124)
T ss_dssp             GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred             CCCCCEEECCCCCCC-CCHHHHHHHHCCCCCCCCCCCCC-CCCC-CCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCEE
T ss_conf             898898979787168-65215655431354532432112-3574-12335557688889865888882565379999999


Q ss_pred             CCCCCCCC
Q ss_conf             32468898
Q 002461          524 LLSIGRNP  531 (919)
Q Consensus       524 ~ls~~~N~  531 (919)
                      ++  .+|+
T Consensus        96 ~l--~~N~  101 (124)
T d1dcea3          96 NL--QGNS  101 (124)
T ss_dssp             EC--TTSG
T ss_pred             EC--CCCC
T ss_conf             89--7996


No 74 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.71  E-value=1.1e-08  Score=69.08  Aligned_cols=76  Identities=33%  Similarity=0.425  Sum_probs=65.3

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99991069973216712228899988977688556677945899997309994799888987642000023685432468
Q 002461          449 ISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLLSIG  528 (919)
Q Consensus       449 ~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls~~  528 (919)
                      +.|+|++|+++ .++ .+..|++|+.|||++|+++ .+|..++.+++|+.|++++|+++ .+| .+..++++..++++.+
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred             CEEECCCCCCC-CCC-CCCCCCCCCEEECCCCCCC-CCHHHHHHHHCCCCCCCCCCCCC-CCC-CCCCCCCCCEEECCCC
T ss_conf             98986899898-871-0105898898979787168-65215655431354532432112-357-4123355576888898


Q ss_pred             C
Q ss_conf             8
Q 002461          529 R  529 (919)
Q Consensus       529 ~  529 (919)
                      .
T Consensus        76 ~   76 (124)
T d1dcea3          76 R   76 (124)
T ss_dssp             C
T ss_pred             C
T ss_conf             6


No 75 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66  E-value=2.4e-08  Score=66.88  Aligned_cols=82  Identities=17%  Similarity=0.199  Sum_probs=61.4

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420000236854
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSL  523 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l  523 (919)
                      .+.+++.|+|++|+|+ .|+..+..+++|+.|||++|.++ .++. +..+++|+.|+|++|+++...+..+..++++..|
T Consensus        16 n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~~-~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L   92 (162)
T d1a9na_          16 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL   92 (162)
T ss_dssp             CTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EECC-CCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred             CCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-CCCC-CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8574848978899788-65762004145998989799787-6477-4457613064310213457776322334534434


Q ss_pred             CCCCC
Q ss_conf             32468
Q 002461          524 LLSIG  528 (919)
Q Consensus       524 ~ls~~  528 (919)
                      +++.+
T Consensus        93 ~L~~N   97 (162)
T d1a9na_          93 ILTNN   97 (162)
T ss_dssp             ECCSC
T ss_pred             EECCC
T ss_conf             20300


No 76 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.63  E-value=3.5e-08  Score=65.89  Aligned_cols=85  Identities=19%  Similarity=0.176  Sum_probs=66.1

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420000236854
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSL  523 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l  523 (919)
                      ....+..+++++|.|++..+..|..+++|+.|+|++|++++..|..+..+++|+.+++++|++++..|..+..++++..+
T Consensus       127 ~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L  206 (284)
T d1ozna_         127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL  206 (284)
T ss_dssp             TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred             HHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCC
T ss_conf             00012110200143144580574043405022314176566256665465634131421143466281676653200023


Q ss_pred             CCCCC
Q ss_conf             32468
Q 002461          524 LLSIG  528 (919)
Q Consensus       524 ~ls~~  528 (919)
                      +++.+
T Consensus       207 ~l~~N  211 (284)
T d1ozna_         207 YLFAN  211 (284)
T ss_dssp             ECCSS
T ss_pred             CCCCC
T ss_conf             33335


No 77 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.62  E-value=7.4e-07  Score=57.52  Aligned_cols=132  Identities=14%  Similarity=0.119  Sum_probs=90.6

Q ss_pred             EEC-CEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC-CCCEEEEEEEEECCCEEEEEEEECCCCCHHHHH
Q ss_conf             207-479999997699899999950589989133368999987403-760316876763399089999834688823442
Q 002461          616 KGG-FGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVH-HRNLASLVGYCNDGGNVGLVYEYMAYGNLKQYL  693 (919)
Q Consensus       616 ~G~-fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~-H~NIv~l~g~~~~~~~~~LV~E~~~~GsL~~~L  693 (919)
                      +|. ...||+... +++.+.+|+...........+.+|...++.+. +-.+.+++++....+..++|+++.++.++.+..
T Consensus        23 ~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          23 EGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             CCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHT
T ss_pred             CCCCCCCEEEEEE-CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC
T ss_conf             8998771899990-898699998488765325569999999998760699872899975089649999860433435433


Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------------------------------------------
Q ss_conf             0012346896769999999999999988169-------------------------------------------------
Q 002461          694 FDETKEALSWKDRLQIAVDAAQGLEYLHHGC-------------------------------------------------  724 (919)
Q Consensus       694 ~~~~~~~ls~~~~~~ia~qia~aL~yLH~~~-------------------------------------------------  724 (919)
                      .       +......++.++++.++.||+..                                                 
T Consensus       102 ~-------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  174 (263)
T d1j7la_         102 E-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFL  174 (263)
T ss_dssp             T-------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHH
T ss_pred             C-------CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf             4-------402699999989999999855684214357644656555778998776555543033232005799999999


Q ss_pred             -------CCCEEEECCCCCEEEECCCCCEEEECCCCCC
Q ss_conf             -------9993530364330785889848996037642
Q 002461          725 -------KPPIIHRDVKTANILLNEKMQAKLADFGFSK  755 (919)
Q Consensus       725 -------~~~iiH~DLKp~NILld~~~~vkI~DFGla~  755 (919)
                             ...++|+|+.+.|||++++....|+||+.+.
T Consensus       175 ~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         175 KTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHCCCCCCCEEEEEECCCCCEEECCCCEEEEEECHHCC
T ss_conf             84498678178986004764236499659996023144


No 78 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.61  E-value=4.2e-08  Score=65.33  Aligned_cols=86  Identities=23%  Similarity=0.334  Sum_probs=65.5

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC-CC------CC
Q ss_conf             995899991069973216712228899988977688556677945899997309994799888987642-00------00
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTS-LV------AR  517 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~-l~------~~  517 (919)
                      .+.++.|++++|.+.+..+..+.++++|+.|+|++|+|+ .||..+..+++|+.|+|++|+++ .|+.. +.      .+
T Consensus       194 ~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~~~~~~~~  271 (305)
T d1xkua_         194 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKK  271 (305)
T ss_dssp             CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCHHCCC
T ss_conf             341330154455332223454334433224302554002-46311033467898989898657-6381002672100215


Q ss_pred             CCCCCCCCCCCCCCCCC
Q ss_conf             23685432468898988
Q 002461          518 SQNGSLLLSIGRNPDLC  534 (919)
Q Consensus       518 ~~l~~l~ls~~~N~~lc  534 (919)
                      ..+.  .+.+.+||.-+
T Consensus       272 ~~L~--~L~L~~N~~~~  286 (305)
T d1xkua_         272 ASYS--GVSLFSNPVQY  286 (305)
T ss_dssp             CCCS--EEECCSSSSCG
T ss_pred             CCCC--EEECCCCCCCC
T ss_conf             8889--78898995766


No 79 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.59  E-value=2.7e-08  Score=66.57  Aligned_cols=76  Identities=24%  Similarity=0.305  Sum_probs=64.1

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99589999106997321671222889998897768855667794589999730999479988898764200002368543
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLL  524 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~  524 (919)
                      .+.++.|+|++|++++. + .+..+++|+.|+|++|+++ .+| .+.++++|+.|+|++|++++.+|  +.+++++..|+
T Consensus       306 ~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~  379 (384)
T d2omza2         306 LKNLTYLTLYFNNISDI-S-PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLG  379 (384)
T ss_dssp             CTTCSEEECCSSCCSCC-G-GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEE
T ss_pred             HCCCCEEECCCCCCCCC-C-CCCCCCCCCEEECCCCCCC-CCH-HHCCCCCCCEEECCCCCCCCCHH--HCCCCCCCEEE
T ss_conf             02467677778877898-4-5366898898989899899-974-67089999989897995899800--00399999963


Q ss_pred             CC
Q ss_conf             24
Q 002461          525 LS  526 (919)
Q Consensus       525 ls  526 (919)
                      ++
T Consensus       380 L~  381 (384)
T d2omza2         380 LN  381 (384)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             97


No 80 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.36  E-value=6.2e-07  Score=58.00  Aligned_cols=74  Identities=31%  Similarity=0.360  Sum_probs=39.9

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             58999910699732167122288999889776885566779458999973099947998889876420000236854324
Q 002461          447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLLS  526 (919)
Q Consensus       447 ~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls  526 (919)
                      .+..+.+..|.+.+  ...+..+++++.|+|++|++++ ++. +..+++|+.|+|++|++++ +| .+..+++++.|+++
T Consensus       286 ~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~-l~~-l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~  359 (384)
T d2omza2         286 ALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD-ISP-VSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAG  359 (384)
T ss_dssp             TCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSC-CGG-GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECC
T ss_pred             CCCCCCCCCCCCCC--CCCCCHHCCCCEEECCCCCCCC-CCC-CCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECC
T ss_conf             22223323233333--2210000246767777887789-845-3668988989898998999-74-67089999989897


No 81 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32  E-value=2.3e-07  Score=60.78  Aligned_cols=82  Identities=26%  Similarity=0.289  Sum_probs=64.7

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCC--CCCCCCCCCC
Q ss_conf             995899991069973216712228899988977688556677945-8999973099947998889876--4200002368
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEF-LSQLPLLRVLNLDGNKLSGSVP--TSLVARSQNG  521 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~L~Ls~N~l~G~iP--~~l~~~~~l~  521 (919)
                      .+.++.|+|++|.|+ .++ .+..|++|+.|+|++|+++. +|.. +..+++|+.|+|++|+++ .++  ..+..++++.
T Consensus        40 l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~-l~~~~~~~l~~L~~L~L~~N~i~-~~~~l~~l~~l~~L~  115 (162)
T d1a9na_          40 LDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLT  115 (162)
T ss_dssp             TTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCC
T ss_pred             CCCCCEEECCCCCCC-CCC-CCCCCCCHHHHHCCCCCCCC-CCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCCCCCCCC
T ss_conf             145998989799787-647-74457613064310213457-77632233453443420300016-654211001365320


Q ss_pred             CCCCCCCCCCC
Q ss_conf             54324688989
Q 002461          522 SLLLSIGRNPD  532 (919)
Q Consensus       522 ~l~ls~~~N~~  532 (919)
                      .+.  +.+|+-
T Consensus       116 ~L~--l~~N~i  124 (162)
T d1a9na_         116 YLC--ILRNPV  124 (162)
T ss_dssp             EEE--CCSSGG
T ss_pred             HHH--CCCCCC
T ss_conf             664--079963


No 82 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.31  E-value=4.3e-07  Score=58.99  Aligned_cols=77  Identities=25%  Similarity=0.341  Sum_probs=62.1

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420000236854
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSL  523 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l  523 (919)
                      ..++++.|++++|.+.+..  .+.++++|+.|+|++|++++ +|. ++.+++|+.|+|++|++++ +| .+.+++.+..|
T Consensus       149 ~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~-i~-~l~~l~~L~~L  222 (227)
T d1h6ua2         149 GLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQISD-VS-PLANTSNLFIV  222 (227)
T ss_dssp             GCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCCCB-CG-GGTTCTTCCEE
T ss_pred             CCCCCCCCCCCCCCCCCCH--HHCCCCCCEECCCCCCCCCC-CHH-HCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCEE
T ss_conf             0211100233333333100--10564633564458884177-853-4479999989795996899-80-20369998989


Q ss_pred             CCC
Q ss_conf             324
Q 002461          524 LLS  526 (919)
Q Consensus       524 ~ls  526 (919)
                      +++
T Consensus       223 ~ls  225 (227)
T d1h6ua2         223 TLT  225 (227)
T ss_dssp             EEE
T ss_pred             EEE
T ss_conf             712


No 83 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.29  E-value=6.1e-06  Score=51.76  Aligned_cols=130  Identities=15%  Similarity=0.097  Sum_probs=83.8

Q ss_pred             EECEECC-EEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC--CEEEEEEEEECCCEEEEEEEECCCCCH
Q ss_conf             1202074-7999999769989999995058998913336899998740376--031687676339908999983468882
Q 002461          613 ILGKGGF-GTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHR--NLASLVGYCNDGGNVGLVYEYMAYGNL  689 (919)
Q Consensus       613 ~LG~G~f-G~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~--NIv~l~g~~~~~~~~~LV~E~~~~GsL  689 (919)
                      .+..|.. ..||+....++..+++|.....   ....+..|...++.+...  .+.++++++.+.+..++|++++++.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             ECCCCCCCCEEEEEEECCCCEEEEEECCCC---CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECCCC
T ss_conf             767865477589999389878999958966---77689999999999986599988613222456615999874413554


Q ss_pred             HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH------------------------------------------------
Q ss_conf             34420012346896769999999999999988------------------------------------------------
Q 002461          690 KQYLFDETKEALSWKDRLQIAVDAAQGLEYLH------------------------------------------------  721 (919)
Q Consensus       690 ~~~L~~~~~~~ls~~~~~~ia~qia~aL~yLH------------------------------------------------  721 (919)
                      .+...       .   ....+.++++.|+-||                                                
T Consensus        94 ~~~~~-------~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (255)
T d1nd4a_          94 LSSHL-------A---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA  163 (255)
T ss_dssp             TTSCC-------C---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred             CCCCC-------C---HHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             32212-------6---8999999999999873688544887554124688999999875411011340112137999999


Q ss_pred             ---HC----CCCCEEEECCCCCEEEECCCCCEEEECCCCCC
Q ss_conf             ---16----99993530364330785889848996037642
Q 002461          722 ---HG----CKPPIIHRDVKTANILLNEKMQAKLADFGFSK  755 (919)
Q Consensus       722 ---~~----~~~~iiH~DLKp~NILld~~~~vkI~DFGla~  755 (919)
                         ..    ....++|+|+.+.|||++++..+.|+||+.+.
T Consensus       164 ~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         164 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHCCCCCCCEEEECCCCCCCEEEECCCEEEEEECHHCC
T ss_conf             99871876579567867888763577379658999853326


No 84 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24  E-value=6e-07  Score=58.09  Aligned_cols=97  Identities=23%  Similarity=0.264  Sum_probs=65.6

Q ss_pred             CCEEEEECCCCC------CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCEEEECC-
Q ss_conf             842388808999------8999589999106997321671222889998897768855667794-58999973099947-
Q 002461          431 YSWDGLNCSYNG------YKPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPE-FLSQLPLLRVLNLD-  502 (919)
Q Consensus       431 ~~W~gv~C~~~~------~~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~l~~l~~L~~L~Ls-  502 (919)
                      |.+..|.|+..+      ..+..++.|+|++|.|+...+..|.++++|+.|+|++|.+...+|. .+..++.++.+.+. 
T Consensus         8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~   87 (242)
T d1xwdc1           8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK   87 (242)
T ss_dssp             ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf             73999998189988768888998899987699189649668614643232110221124201001122222222211111


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9988898764200002368543246
Q 002461          503 GNKLSGSVPTSLVARSQNGSLLLSI  527 (919)
Q Consensus       503 ~N~l~G~iP~~l~~~~~l~~l~ls~  527 (919)
                      .|++....+..+..++++..+.++.
T Consensus        88 ~n~l~~~~~~~~~~l~~L~~l~l~~  112 (242)
T d1xwdc1          88 ANNLLYINPEAFQNLPNLQYLLISN  112 (242)
T ss_dssp             CTTCCEECTTSEECCTTCCEEEEES
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             2343222222122222222223421


No 85 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.19  E-value=1.7e-06  Score=55.22  Aligned_cols=79  Identities=23%  Similarity=0.207  Sum_probs=54.4

Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCEEECCCC-CCCCCCC-CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9991069973216712228899988977688-5566779-4589999730999479988898764200002368543246
Q 002461          450 SLNLTSEGLTGKISPSLSNLKSLENLDLSNN-SLTGSIP-EFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLLSI  527 (919)
Q Consensus       450 ~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N-~l~g~iP-~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls~  527 (919)
                      .++.+++++. .+|..+..+++|+.|+|++| .++ .|| ..|.++++|+.|+|++|+++...|..+..+++++.|+|+.
T Consensus        12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~   89 (156)
T d2ifga3          12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF   89 (156)
T ss_dssp             CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred             EEEECCCCCC-CCCCCCCCCCCCCEEECCCCCCCC-CCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf             6985289976-586002576565743168986644-36921225666667216202124774201112455433332267


Q ss_pred             CCC
Q ss_conf             889
Q 002461          528 GRN  530 (919)
Q Consensus       528 ~~N  530 (919)
                      +.-
T Consensus        90 N~l   92 (156)
T d2ifga3          90 NAL   92 (156)
T ss_dssp             SCC
T ss_pred             CCC
T ss_conf             878


No 86 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.09  E-value=4.7e-06  Score=52.47  Aligned_cols=73  Identities=30%  Similarity=0.382  Sum_probs=28.1

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             5899991069973216712228899988977688556677945899997309994799888987642000023685432
Q 002461          447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLL  525 (919)
Q Consensus       447 ~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~l  525 (919)
                      .+..++++.|.+++  +..+.++++|+.+++++|++++ +++ +.++++|+.|+|++|+++ .+| .+..+++++.|++
T Consensus       135 ~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~~-l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~L  207 (210)
T d1h6ta2         135 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLEL  207 (210)
T ss_dssp             TCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEE
T ss_pred             CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCEEECCCCCCC-CCH-HHCCCCCCCEEEC
T ss_conf             12221122233345--4310001332100134643025-645-367898999989799899-872-1169999899971


No 87 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.07  E-value=4.4e-06  Score=52.66  Aligned_cols=71  Identities=28%  Similarity=0.305  Sum_probs=30.3

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89999106997321671222889998897768855667794589999730999479988898764200002368543
Q 002461          448 IISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLL  524 (919)
Q Consensus       448 i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~  524 (919)
                      ++.|+++++.+.. ++ .+..+++|+.|+|++|++++ +|. ++.+++|+.|++++|++++ +| .+..++++..+.
T Consensus        48 L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~~-~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~  118 (210)
T d1h6ta2          48 IDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS  118 (210)
T ss_dssp             CCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred             CCEEECCCCCCCC-CH-HHHHCCCCCEEECCCCCCCC-CCC-CCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCC
T ss_conf             4589782798887-44-47648998987698960258-601-1358621201433333212-22-121222111223


No 88 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.05  E-value=7.1e-06  Score=51.35  Aligned_cols=58  Identities=36%  Similarity=0.563  Sum_probs=28.8

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf             95899991069973216712228899988977688556677945899997309994799888
Q 002461          446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS  507 (919)
Q Consensus       446 ~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~  507 (919)
                      ++++.|++++|.+. .++ .+..+++|+.|++++|++++ +++ ++++++|+.|+|++|+++
T Consensus       128 ~~L~~L~l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~-l~~-l~~l~~L~~L~ls~N~i~  185 (199)
T d2omxa2         128 TNLNRLELSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTD-LKP-LANLTTLERLDISSNKVS  185 (199)
T ss_dssp             TTCSEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC
T ss_pred             HHHHHHHHHHHHHC-CCC-CCCCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCEEECCCCCCC
T ss_conf             23677643111100-234-33321111112234555567-701-167998999978799799


No 89 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.91  E-value=0.00015  Score=43.03  Aligned_cols=76  Identities=18%  Similarity=0.169  Sum_probs=48.4

Q ss_pred             CEECEECCEEEEEEEECC-CCEEEEEEEECC-------CCCCCHHHHHHHHHHHHCC-C--CCEEEEEEEEECCCEEEEE
Q ss_conf             412020747999999769-989999995058-------9989133368999987403-7--6031687676339908999
Q 002461          612 RILGKGGFGTVYHGYLAD-GSEVAIKMLSAS-------SSQGPKQFRTEAQLLMRVH-H--RNLASLVGYCNDGGNVGLV  680 (919)
Q Consensus       612 ~~LG~G~fG~Vyka~~~~-g~~VAVK~l~~~-------~~~~~~~f~~Ei~~L~~l~-H--~NIv~l~g~~~~~~~~~LV  680 (919)
                      +.||.|....||+....+ ++.+++|.-...       -.....+...|.+.|+.+. +  ..+.+++.+.  ....++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEE
T ss_pred             EEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC--CCCCEEE
T ss_conf             98079852768999957998489996177130346777888778999999999986505798855289985--9887798


Q ss_pred             EEECCCCCH
Q ss_conf             983468882
Q 002461          681 YEYMAYGNL  689 (919)
Q Consensus       681 ~E~~~~GsL  689 (919)
                      ||++++..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EECCCCCCC
T ss_conf             713577653


No 90 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.90  E-value=1.2e-05  Score=49.88  Aligned_cols=62  Identities=29%  Similarity=0.405  Sum_probs=50.4

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             99958999910699732167122288999889776885566779458999973099947998889876420
Q 002461          444 KPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL  514 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l  514 (919)
                      .++.++.|+|++|.|+ .+|..   +++|+.|+|++|+|+ .||..   +++|+.|+|++|+++ .+|...
T Consensus       282 ~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~  343 (353)
T d1jl5a_         282 LPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIP  343 (353)
T ss_dssp             CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCC
T ss_pred             CCCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCCC
T ss_conf             6898898979799168-35665---487998989999687-54532---288898987699189-777652


No 91 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.88  E-value=2.4e-05  Score=48.07  Aligned_cols=57  Identities=26%  Similarity=0.462  Sum_probs=23.0

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf             5899991069973216712228899988977688556677945899997309994799888
Q 002461          447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS  507 (919)
Q Consensus       447 ~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~  507 (919)
                      .++.|++++++++ .++ .+..|++|+.|+|++|++++ +++ +.++++|+.|++++|.+.
T Consensus        41 ~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~   97 (199)
T d2omxa2          41 QVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA   97 (199)
T ss_dssp             TCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC
T ss_pred             CCCEEECCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCCC
T ss_conf             8789989999997-752-02137886757545655667-640-167752231111222222


No 92 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.77  E-value=6e-05  Score=45.56  Aligned_cols=73  Identities=33%  Similarity=0.420  Sum_probs=47.2

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99589999106997321671222889998897768855667794589999730999479988898764200002368543
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLL  524 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~  524 (919)
                      +......++..+.+.+. +   ..+++|+.|+|++|+|+ .||..   +++|+.|+|++|+++ .+|..+.   +++.|+
T Consensus       263 ~~~~~~~~~~~~~~~~~-~---~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~~~---~L~~L~  330 (353)
T d1jl5a_         263 PPNLYYLNASSNEIRSL-C---DLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPELPQ---NLKQLH  330 (353)
T ss_dssp             CTTCCEEECCSSCCSEE-C---CCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCCCT---TCCEEE
T ss_pred             CCHHCCCCCCCCCCCCC-C---CCCCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCCCC---CCCEEE
T ss_conf             30001233335753234-5---66898898979799168-35665---487998989999687-5453228---889898


Q ss_pred             CCCCCCC
Q ss_conf             2468898
Q 002461          525 LSIGRNP  531 (919)
Q Consensus       525 ls~~~N~  531 (919)
                      +  .+|+
T Consensus       331 L--~~N~  335 (353)
T d1jl5a_         331 V--EYNP  335 (353)
T ss_dssp             C--CSSC
T ss_pred             C--CCCC
T ss_conf             7--6991


No 93 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.75  E-value=2e-07  Score=61.08  Aligned_cols=79  Identities=23%  Similarity=0.252  Sum_probs=56.8

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99589999106997321671222889998897768855667794589999730999479988898764200002368543
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLL  524 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~  524 (919)
                      ...++.|+|++|+|+ .++ .+..|++|+.|+|++|.++ .+|.....+++|+.|++++|+++. ++ .+..++++..|+
T Consensus        47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~  121 (198)
T d1m9la_          47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY  121 (198)
T ss_dssp             TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEE
T ss_pred             CCCCCEEECCCCCCC-CCC-CCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCC
T ss_conf             604615199446899-864-4247825357341353432-100003322123333333322222-22-222222341112


Q ss_pred             CCCC
Q ss_conf             2468
Q 002461          525 LSIG  528 (919)
Q Consensus       525 ls~~  528 (919)
                      ++.+
T Consensus       122 L~~N  125 (198)
T d1m9la_         122 MSNN  125 (198)
T ss_dssp             ESEE
T ss_pred             CCCC
T ss_conf             3410


No 94 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.66  E-value=7.1e-05  Score=45.08  Aligned_cols=72  Identities=24%  Similarity=0.335  Sum_probs=27.8

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             589999106997321671222889998897768855667794589999730999479988898764200002368543
Q 002461          447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLL  524 (919)
Q Consensus       447 ~i~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~  524 (919)
                      .+..+.++.+.+....  .+.++++|+.|++++|.+++ ++. +.++++|+.|+|++|++++ +|. +..++++..|+
T Consensus       130 ~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~-~~~-l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~  201 (227)
T d1h6ua2         130 NLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVH  201 (227)
T ss_dssp             TCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEE
T ss_pred             CHHHHHCHHHHHCHHH--HHCCCCCCCCCCCCCCCCCC-CHH-HCCCCCCEECCCCCCCCCC-CHH-HCCCCCCCEEE
T ss_conf             0122200000000000--00102111002333333331-001-0564633564458884177-853-44799999897


No 95 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.50  E-value=3.2e-06  Score=53.54  Aligned_cols=63  Identities=30%  Similarity=0.394  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             167122288999889776885566779458999973099947998889876420000236854324
Q 002461          461 KISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLLS  526 (919)
Q Consensus       461 ~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls  526 (919)
                      .++.++..|++|+.|+|++|+++ .|+ .+..+++|+.|+|++|+++ .+|......+.+..|+++
T Consensus        39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~  101 (198)
T d1m9la_          39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWIS  101 (198)
T ss_dssp             CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECS
T ss_pred             HHHHHHHCCCCCCEEECCCCCCC-CCC-CCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCC
T ss_conf             02467762604615199446899-864-4247825357341353432-100003322123333333


No 96 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.44  E-value=0.00013  Score=43.43  Aligned_cols=78  Identities=17%  Similarity=0.175  Sum_probs=48.8

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCEE-ECCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9958999910699732167122288999889-7768855667794-5899997309994799888987642000023685
Q 002461          445 PPKIISLNLTSEGLTGKISPSLSNLKSLENL-DLSNNSLTGSIPE-FLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGS  522 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~ip~~~~~l~~L~~L-~Ls~N~l~g~iP~-~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~  522 (919)
                      +..+..|++.+|+++ .++....+.+++..+ ++++|+++ .||. .+.++++|+.|+|++|+++...+..+.++..+..
T Consensus       152 ~~~l~~L~l~~n~l~-~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~  229 (242)
T d1xwdc1         152 SFESVILWLNKNGIQ-EIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA  229 (242)
T ss_dssp             BSSCEEEECCSSCCC-EECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEES
T ss_pred             CCCCEEEECCCCCCC-CCCCCCCCCHHHHCCCCCCCCCCC-CCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf             331001220012333-322222220111012123543246-424788668999998989799289459779737713414


Q ss_pred             CC
Q ss_conf             43
Q 002461          523 LL  524 (919)
Q Consensus       523 l~  524 (919)
                      ++
T Consensus       230 l~  231 (242)
T d1xwdc1         230 RS  231 (242)
T ss_dssp             SS
T ss_pred             CC
T ss_conf             76


No 97 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.44  E-value=0.0014  Score=36.99  Aligned_cols=157  Identities=13%  Similarity=0.126  Sum_probs=85.2

Q ss_pred             CCCHHHHHHHHHHHC-----CEEC-EECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCE--EEEE
Q ss_conf             448879999875331-----4120-2074799999976998999999505899891333689999874037603--1687
Q 002461          597 QFTYSEIVDITNNFH-----RILG-KGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNL--ASLV  668 (919)
Q Consensus       597 ~~~~~el~~~t~~f~-----~~LG-~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NI--v~l~  668 (919)
                      .++.+.+..+.....     +++- .+.--.||++...+|..+++|+.+.. ....+++..|...+..+....+  +..+
T Consensus         7 ~L~pd~i~~al~~~g~~~~~~~~~L~s~EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~   85 (325)
T d1zyla1           7 TLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPV   85 (325)
T ss_dssp             CCCHHHHHHHHHHTTCCCCSCCEEECCSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             669799999999759997757232566120269998389997999984787-7889999999999999985599878752


Q ss_pred             E-----EEECCCEEEEEEEECCCCCHHH-----H---------HHCC-------CCCCCCH-------------------
Q ss_conf             6-----7633990899998346888234-----4---------2001-------2346896-------------------
Q 002461          669 G-----YCNDGGNVGLVYEYMAYGNLKQ-----Y---------LFDE-------TKEALSW-------------------  703 (919)
Q Consensus       669 g-----~~~~~~~~~LV~E~~~~GsL~~-----~---------L~~~-------~~~~ls~-------------------  703 (919)
                      .     .....+..+.++++.++..+..     +         ++..       .+..+++                   
T Consensus        86 ~~~g~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~  165 (325)
T d1zyla1          86 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS  165 (325)
T ss_dssp             CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred             ECCCCEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
T ss_conf             06898056653479999865277688999999999989999998863035786556778978876656899987476998


Q ss_pred             HHHHHHHHHHHHHHHHHH----HCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCC
Q ss_conf             769999999999999988----16999935303643307858898489960376423
Q 002461          704 KDRLQIAVDAAQGLEYLH----HGCKPPIIHRDVKTANILLNEKMQAKLADFGFSKI  756 (919)
Q Consensus       704 ~~~~~ia~qia~aL~yLH----~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~~  756 (919)
                      ..+..+...+.+.+..+.    .....+++|+|+.+.|||++++  ..++||+-+..
T Consensus       166 ~~~~~~~~~~~~l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         166 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECC--CEEEECHHCCC
T ss_conf             89899999999999999984545687120247888042878389--35886520146


No 98 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.22  E-value=1.1e-05  Score=50.19  Aligned_cols=71  Identities=28%  Similarity=0.270  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1671222889998897768855667--794589999730999479988898764200002368543246889898
Q 002461          461 KISPSLSNLKSLENLDLSNNSLTGS--IPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQNGSLLLSIGRNPDL  533 (919)
Q Consensus       461 ~ip~~~~~l~~L~~L~Ls~N~l~g~--iP~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~~~~l~~l~ls~~~N~~l  533 (919)
                      .++....++++|+.|+|++|+++..  ++..+..+++|+.|+|++|.++ .+++ +..+.......+.+.+||-.
T Consensus        56 ~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~-l~~l~~~~L~~L~L~~Npl~  128 (162)
T d1koha1          56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERE-LDKIKGLKLEELWLDGNSLS  128 (162)
T ss_dssp             HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGG-HHHHTTCCCSSCCCTTSTTS
T ss_pred             HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC-CCHH-HHHHHCCCCCEEECCCCCCC
T ss_conf             6078897487878863777666677315889865885610004357213-4234-42220331042664899767


No 99 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.19  E-value=0.0036  Score=34.36  Aligned_cols=73  Identities=16%  Similarity=0.276  Sum_probs=48.3

Q ss_pred             CEECEECCEEEEEEEECCC--------CEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCE-EEEEEEEECCCEEEEEEE
Q ss_conf             4120207479999997699--------8999999505899891333689999874037603-168767633990899998
Q 002461          612 RILGKGGFGTVYHGYLADG--------SEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNL-ASLVGYCNDGGNVGLVYE  682 (919)
Q Consensus       612 ~~LG~G~fG~Vyka~~~~g--------~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NI-v~l~g~~~~~~~~~LV~E  682 (919)
                      +.|+.|-.-.+|++...++        ..+.+++.. . ........+|..+++.+.-.++ .++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC-C-CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC----CEEEE
T ss_conf             991785334348999688775445789817999659-9-61165899999999999757999808998189----56999


Q ss_pred             ECCCCCHH
Q ss_conf             34688823
Q 002461          683 YMAYGNLK  690 (919)
Q Consensus       683 ~~~~GsL~  690 (919)
                      |+++.++.
T Consensus       122 fi~g~~l~  129 (395)
T d1nw1a_         122 YIPSRPLS  129 (395)
T ss_dssp             CCCEEECC
T ss_pred             EECCCCCC
T ss_conf             73455488


No 100
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.99  E-value=9.2e-05  Score=44.37  Aligned_cols=17  Identities=35%  Similarity=0.450  Sum_probs=7.0

Q ss_pred             CCCCCCCCEEECCCCCC
Q ss_conf             22889998897768855
Q 002461          466 LSNLKSLENLDLSNNSL  482 (919)
Q Consensus       466 ~~~l~~L~~L~Ls~N~l  482 (919)
                      +..+++|+.|||++|.+
T Consensus        51 L~~~~~L~~LdLs~N~i   67 (460)
T d1z7xw1          51 LRVNPALAELNLRSNEL   67 (460)
T ss_dssp             HHTCTTCCEEECTTCCC
T ss_pred             HHCCCCCCEEECCCCCC
T ss_conf             85399988897959859


No 101
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81  E-value=5.9e-05  Score=45.59  Aligned_cols=84  Identities=27%  Similarity=0.281  Sum_probs=54.6

Q ss_pred             CCCCEEEEEEECCCCCCC-CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCC-CCCCC-CCCCCCCCCCC
Q ss_conf             999589999106997321-6712228899988977688556677945899997309994799-88898-76420000236
Q 002461          444 KPPKIISLNLTSEGLTGK-ISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGN-KLSGS-VPTSLVARSQN  520 (919)
Q Consensus       444 ~~~~i~~l~L~~n~l~G~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N-~l~G~-iP~~l~~~~~l  520 (919)
                      .+.+++.|+|+++.++.. +..-+.++++|+.|+|+++.+++..+..++.+++|+.|+|+++ .++.. +..-...++++
T Consensus        44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L  123 (284)
T d2astb2          44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL  123 (284)
T ss_dssp             CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred             CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf             67878878898984577799999974877651452346798678999851899757151001341235540365788743


Q ss_pred             CCCCCCC
Q ss_conf             8543246
Q 002461          521 GSLLLSI  527 (919)
Q Consensus       521 ~~l~ls~  527 (919)
                      +.|+++.
T Consensus       124 ~~L~ls~  130 (284)
T d2astb2         124 DELNLSW  130 (284)
T ss_dssp             CEEECCC
T ss_pred             CCCCCCC
T ss_conf             5652245


No 102
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.79  E-value=0.011  Score=31.25  Aligned_cols=155  Identities=11%  Similarity=0.075  Sum_probs=81.3

Q ss_pred             CCHHHHHHHHHHH--C-----CEECEECCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEE--EEE
Q ss_conf             4887999987533--1-----412020747999999769989999995058998913336899998740376031--687
Q 002461          598 FTYSEIVDITNNF--H-----RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEAQLLMRVHHRNLA--SLV  668 (919)
Q Consensus       598 ~~~~el~~~t~~f--~-----~~LG~G~fG~Vyka~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~~L~~l~H~NIv--~l~  668 (919)
                      ++.+|+.....++  .     +.|..|---+.|+....+| .+++|+.....  ...+...|...+..+...++.  ..+
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCC-CEEEEECCCCC--CHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             8999999999867999856852378885267389997897-28999807899--98899999999875430255545564


Q ss_pred             E------EEECCCEEEEEEEECCCCCHHHHH--------------HCCC-------------------------CCCCCH
Q ss_conf             6------763399089999834688823442--------------0012-------------------------346896
Q 002461          669 G------YCNDGGNVGLVYEYMAYGNLKQYL--------------FDET-------------------------KEALSW  703 (919)
Q Consensus       669 g------~~~~~~~~~LV~E~~~~GsL~~~L--------------~~~~-------------------------~~~ls~  703 (919)
                      -      ..........++.+..+......-              +...                         ......
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             EECCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCC
T ss_conf             10489762134125502453114655333204678888899876454443202453101110120024567777653114


Q ss_pred             HHHHHHHHHHHHHHHHHH-HCCCCCEEEECCCCCEEEECCCCCEEEECCCCCC
Q ss_conf             769999999999999988-1699993530364330785889848996037642
Q 002461          704 KDRLQIAVDAAQGLEYLH-HGCKPPIIHRDVKTANILLNEKMQAKLADFGFSK  755 (919)
Q Consensus       704 ~~~~~ia~qia~aL~yLH-~~~~~~iiH~DLKp~NILld~~~~vkI~DFGla~  755 (919)
                      ......+......+...+ .....+++|+|+.+.||+++.+...-|.||+.+.
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCC
T ss_conf             12799999998764204855454503337863656402045412674222123


No 103
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.78  E-value=0.0005  Score=39.76  Aligned_cols=80  Identities=24%  Similarity=0.217  Sum_probs=38.9

Q ss_pred             CCEEEEEEECC--CCCCC-CCCCCCCCCCCCEEECCCC-CCCCCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCC
Q ss_conf             95899991069--97321-6712228899988977688-55667794589999730999479-98889876420000236
Q 002461          446 PKIISLNLTSE--GLTGK-ISPSLSNLKSLENLDLSNN-SLTGSIPEFLSQLPLLRVLNLDG-NKLSGSVPTSLVARSQN  520 (919)
Q Consensus       446 ~~i~~l~L~~n--~l~G~-ip~~~~~l~~L~~L~Ls~N-~l~g~iP~~l~~l~~L~~L~Ls~-N~l~G~iP~~l~~~~~l  520 (919)
                      +.++.|+|++.  +++.. +..-+.++++|+.|+|+++ .+++..+..+..+++|++|+|++ +.+++.....+.+++++
T Consensus       148 ~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L  227 (284)
T d2astb2         148 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL  227 (284)
T ss_dssp             TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred             CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCC
T ss_conf             11101221355424444434342323222123553223477830333321357687798999997873789997269998


Q ss_pred             CCCCC
Q ss_conf             85432
Q 002461          521 GSLLL  525 (919)
Q Consensus       521 ~~l~l  525 (919)
                      ..|++
T Consensus       228 ~~L~l  232 (284)
T d2astb2         228 KTLQV  232 (284)
T ss_dssp             CEEEC
T ss_pred             CEEEE
T ss_conf             98964


No 104
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.74  E-value=2.4e-05  Score=48.05  Aligned_cols=79  Identities=30%  Similarity=0.246  Sum_probs=58.5

Q ss_pred             CCCEEEEEEECCCCCCC--CCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCCC-------C
Q ss_conf             99589999106997321--671222889998897768855667794-5899997309994799888987642-------0
Q 002461          445 PPKIISLNLTSEGLTGK--ISPSLSNLKSLENLDLSNNSLTGSIPE-FLSQLPLLRVLNLDGNKLSGSVPTS-------L  514 (919)
Q Consensus       445 ~~~i~~l~L~~n~l~G~--ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~l~~l~~L~~L~Ls~N~l~G~iP~~-------l  514 (919)
                      .+.++.|+|++|+|+..  ++..+..+++|+.|||++|+++ .++. ......+|+.|+|++|.+++.....       +
T Consensus        64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~  142 (162)
T d1koha1          64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR  142 (162)
T ss_dssp             CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH
T ss_pred             CCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC-CCHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             87878863777666677315889865885610004357213-42344222033104266489976767666156999999


Q ss_pred             CCCCCCCCCC
Q ss_conf             0002368543
Q 002461          515 VARSQNGSLL  524 (919)
Q Consensus       515 ~~~~~l~~l~  524 (919)
                      ..++++..|+
T Consensus       143 ~~~P~L~~LD  152 (162)
T d1koha1         143 ERFPKLLRLD  152 (162)
T ss_dssp             TTSTTCCEET
T ss_pred             HHCCCCCEEC
T ss_conf             9889978799


No 105
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.44  E-value=0.00011  Score=43.94  Aligned_cols=63  Identities=33%  Similarity=0.474  Sum_probs=34.3

Q ss_pred             CCEEEEEEECCCCCCC----CCCCCC-CCCCCCEEECCCCCCCCC----CCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             9589999106997321----671222-889998897768855667----79458999973099947998889
Q 002461          446 PKIISLNLTSEGLTGK----ISPSLS-NLKSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNLDGNKLSG  508 (919)
Q Consensus       446 ~~i~~l~L~~n~l~G~----ip~~~~-~l~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~Ls~N~l~G  508 (919)
                      +.++.|+|++|.|+..    +...+. ..++|+.|+|++|.++..    ++..+..+++|+.|+|++|+++.
T Consensus        55 ~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~  126 (460)
T d1z7xw1          55 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD  126 (460)
T ss_dssp             TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHH
T ss_conf             998889795985972899999999843788778877888775432210121100003432002444332023


No 106
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.13  E-value=0.00051  Score=39.69  Aligned_cols=81  Identities=17%  Similarity=0.190  Sum_probs=48.1

Q ss_pred             CCEEEEEEECCCCCC----CCCCCCCCCCCCCEEECCCCCCCCC----------CCCCCCCCCCCEEEECCCCCCCCCC-
Q ss_conf             958999910699732----1671222889998897768855667----------7945899997309994799888987-
Q 002461          446 PKIISLNLTSEGLTG----KISPSLSNLKSLENLDLSNNSLTGS----------IPEFLSQLPLLRVLNLDGNKLSGSV-  510 (919)
Q Consensus       446 ~~i~~l~L~~n~l~G----~ip~~~~~l~~L~~L~Ls~N~l~g~----------iP~~l~~l~~L~~L~Ls~N~l~G~i-  510 (919)
                      ..++.|+|++|.+..    .+...+..+++|+.|+|+++.+...          +-..+...++|+.|+|++|.++..- 
T Consensus        31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~  110 (344)
T d2ca6a1          31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ  110 (344)
T ss_dssp             SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             99788978498377899999999998589988888877754334542106787999887547775633000013455433


Q ss_pred             ---CCCCCCCCCCCCCCCC
Q ss_conf             ---6420000236854324
Q 002461          511 ---PTSLVARSQNGSLLLS  526 (919)
Q Consensus       511 ---P~~l~~~~~l~~l~ls  526 (919)
                         ...+...+.+..|.++
T Consensus       111 ~~l~~~l~~~~~L~~L~l~  129 (344)
T d2ca6a1         111 EPLIDFLSKHTPLEHLYLH  129 (344)
T ss_dssp             HHHHHHHHHCTTCCEEECC
T ss_pred             CCHHHHHCCCCCCHHEECC
T ss_conf             3101110023432100000


No 107
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=95.03  E-value=0.0018  Score=36.24  Aligned_cols=17  Identities=35%  Similarity=0.575  Sum_probs=6.2

Q ss_pred             CCCCCCCCEEECCCCCC
Q ss_conf             22889998897768855
Q 002461          466 LSNLKSLENLDLSNNSL  482 (919)
Q Consensus       466 ~~~l~~L~~L~Ls~N~l  482 (919)
                      +..+++|+.|+|++|.+
T Consensus       211 l~~~~~L~~L~Ls~N~i  227 (344)
T d2ca6a1         211 LAYCQELKVLDLQDNTF  227 (344)
T ss_dssp             GGGCTTCCEEECCSSCC
T ss_pred             HCCHHHHCCCCCCCCCC
T ss_conf             21101211222333322


No 108
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.75  E-value=0.0099  Score=31.60  Aligned_cols=63  Identities=25%  Similarity=0.451  Sum_probs=28.2

Q ss_pred             CCEEEEEEECC-CCCCC----CCCCCCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             95899991069-97321----671222889998897768855667----79458999973099947998889
Q 002461          446 PKIISLNLTSE-GLTGK----ISPSLSNLKSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNLDGNKLSG  508 (919)
Q Consensus       446 ~~i~~l~L~~n-~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~Ls~N~l~G  508 (919)
                      +.++.|+|+++ .++..    +-..+...+.|+.|+|++|.+...    +-..+...+.|+.|+|++|.++.
T Consensus        15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~   86 (167)
T d1pgva_          15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP   86 (167)
T ss_dssp             SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCH
T ss_conf             998197827999989899999999976377645401201562156798875310002343300330102145


No 109
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.48  E-value=0.0066  Score=32.72  Aligned_cols=62  Identities=16%  Similarity=0.178  Sum_probs=48.1

Q ss_pred             CCEEEEEEECCCCCCC----CCCCCCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCEEEECCCCCCC
Q ss_conf             9589999106997321----671222889998897768855667----7945899997309994799888
Q 002461          446 PKIISLNLTSEGLTGK----ISPSLSNLKSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNLDGNKLS  507 (919)
Q Consensus       446 ~~i~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~Ls~N~l~  507 (919)
                      ..++.|+|++|.+...    +...+...+.|+.|+|++|.++..    +-..+...++|+.|+|++|.+.
T Consensus        44 ~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~  113 (167)
T d1pgva_          44 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS  113 (167)
T ss_dssp             SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf             7645401201562156798875310002343300330102145999999999984893898778877688


No 110
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=90.13  E-value=0.021  Score=29.53  Aligned_cols=85  Identities=18%  Similarity=0.234  Sum_probs=49.4

Q ss_pred             CCEEEEEEEC-CCCCCC----CCCCCCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCEEEECCCCCCCCCC----CC
Q ss_conf             9589999106-997321----671222889998897768855667----7945899997309994799888987----64
Q 002461          446 PKIISLNLTS-EGLTGK----ISPSLSNLKSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNLDGNKLSGSV----PT  512 (919)
Q Consensus       446 ~~i~~l~L~~-n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~Ls~N~l~G~i----P~  512 (919)
                      +.++.|+|++ +.++..    +-..+...++|+.|+|++|.++..    +-..+...++|+.+++++|.+....    -.
T Consensus        17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~   96 (166)
T d1io0a_          17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE   96 (166)
T ss_dssp             TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHH
T ss_conf             99868876899998989999999888419825743015896117789999987752122101210254322014788999


Q ss_pred             CCCCCCCCCCCCCCCCCC
Q ss_conf             200002368543246889
Q 002461          513 SLVARSQNGSLLLSIGRN  530 (919)
Q Consensus       513 ~l~~~~~l~~l~ls~~~N  530 (919)
                      .+...+.+..+.+....|
T Consensus        97 ~l~~~~~L~~l~L~l~~n  114 (166)
T d1io0a_          97 ALQSNTSLIELRIDNQSQ  114 (166)
T ss_dssp             GGGGCSSCCEEECCCCSS
T ss_pred             HHHHCCCCCEEEECCCCC
T ss_conf             998486524773216778


No 111
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=77.55  E-value=0.093  Score=25.50  Aligned_cols=82  Identities=15%  Similarity=0.194  Sum_probs=44.1

Q ss_pred             CCEEEEEEECCCCCCC----CCCCCCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCEEEEC--CCCCCCCC----CC
Q ss_conf             9589999106997321----671222889998897768855667----7945899997309994--79988898----76
Q 002461          446 PKIISLNLTSEGLTGK----ISPSLSNLKSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNL--DGNKLSGS----VP  511 (919)
Q Consensus       446 ~~i~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~L--s~N~l~G~----iP  511 (919)
                      +.++.|+|++|.++..    +...+...+.|+.|++++|.++..    +-..+...++|+.++|  +.|.+...    +.
T Consensus        46 ~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La  125 (166)
T d1io0a_          46 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA  125 (166)
T ss_dssp             CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHH
T ss_conf             82574301589611778999998775212210121025432201478899999848652477321677867679999999


Q ss_pred             CCCCCCCCCCCCCCCC
Q ss_conf             4200002368543246
Q 002461          512 TSLVARSQNGSLLLSI  527 (919)
Q Consensus       512 ~~l~~~~~l~~l~ls~  527 (919)
                      ..+...+.+..|++++
T Consensus       126 ~~L~~n~~L~~L~l~~  141 (166)
T d1io0a_         126 NMLEKNTTLLKFGYHF  141 (166)
T ss_dssp             HHHHHCSSCCEEECCC
T ss_pred             HHHHHCCCCCEEECCC
T ss_conf             9998499847885818


Done!