BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002462
(919 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 152/306 (49%), Gaps = 31/306 (10%)
Query: 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA--YLLELD 581
F+ ++L A+ +FS+ N++ G G +++G L G V +KR+ + + + E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S H L+ L G CM E+ LVY YM NG ++S L + ++ LDW R +
Sbjct: 88 MISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRERPESQ---PPLDWPKRQR 143
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR 701
IA+G+A GL+YLH C +HRDV+A++ILLD++FE +G A+ D +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG--LAKLMDYKDXHVXX 201
Query: 702 LLR------LPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILE 755
+R P+ G S T DV+ +G +LLEL+TG+ + A +++
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKT-----DVFGYGVMLLELITGQRAFDLARLANDDDVM- 255
Query: 756 QTLPYISIYDKELVTKIVDPSLIIDEDLL-----EEVWAMAIVARSCLNPKPTRRPLMRY 810
L ++ KE K+ ++D DL EEV + VA C P RP M
Sbjct: 256 -LLDWVKGLLKE--KKL---EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSE 309
Query: 811 ILKALE 816
+++ LE
Sbjct: 310 VVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 35/309 (11%)
Query: 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA----YLLE 579
F+ ++L A+ +F + N++ G G +++G L G V +KR L+ +T+ + E
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKR--LKEERTQGGELQFQTE 77
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
++ S H L+ L G CM E+ LVY YM NG ++S L + ++ LDW R
Sbjct: 78 VEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRERPESQ---PPLDWPKR 133
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
+IA+G+A GL+YLH C +HRDV+A++ILLD++FE +G A+ D +
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG--LAKLMDYKDXHV 191
Query: 700 TRLLR------LPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEI 753
+R P+ G S T DV+ +G +LLEL+TG+ + A ++
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKT-----DVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 754 LEQTLPYISIYDKELVTKIVDPSLIIDEDLL-----EEVWAMAIVARSCLNPKPTRRPLM 808
+ L ++ KE K+ ++D DL EEV + VA C P RP M
Sbjct: 247 M--LLDWVKGLLKE--KKL---EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
Query: 809 RYILKALEN 817
+++ LE
Sbjct: 300 SEVVRMLEG 308
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 16/296 (5%)
Query: 529 LLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVS 587
L AT +F LI +G G +++G+L G V +KR +S + E + E++ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
H LV L+G C ER NE L+YKYM NG+L LY ++ S+ W RL+I IGAA
Sbjct: 94 HPHLVSLIGFCDER-NEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAA 149
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRL 705
GL YLH T +HRDV++ +ILLD+ F ++ +S+ + G H + +
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 706 PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYD 765
E G LT DVY FG VL E++ + I S ++ + E + ++
Sbjct: 207 YIDPEYFIKGRLTEKS--DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA---VESHN 261
Query: 766 KELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKV 821
+ +IVDP+L D+ E + A CL RP M +L LE L++
Sbjct: 262 NGQLEQIVDPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 147/297 (49%), Gaps = 18/297 (6%)
Query: 529 LLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVS 587
L AT +F LI +G G +++G+L G V +KR +S + E + E++ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
H LV L+G C ER NE L+YKYM NG+L LY ++ S+ W RL+I IGAA
Sbjct: 94 HPHLVSLIGFCDER-NEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAA 149
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ 707
GL YLH T +HRDV++ +ILLD+ F ++ + +G + Q+ + +++
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFG-ISKKGTELDQTHLXXVVKGTL 205
Query: 708 SS---EQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIY 764
E G LT DVY FG VL E++ + I S ++ + E + +
Sbjct: 206 GYIDPEYFIKGRLTEKS--DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA---VESH 260
Query: 765 DKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKV 821
+ + +IVDP+L D+ E + A CL RP M +L LE L++
Sbjct: 261 NNGQLEQIVDPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 27/306 (8%)
Query: 522 ESFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA 575
SF++ +L T +F + N + G G +++G + V K + + TE
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 576 ----YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
+ E+ +K H LV LLG + + + LVY YMPNG SL + + D
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGD-DLCLVYVYMPNG----SLLDRLSCLDGT 127
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++ A
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 692 GDAHQSRITRLL-RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV 750
A +R++ + + G +T D+Y FG VLLE++TG + + Q+
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 751 KEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRY 810
+++ + ++ + K ++ D D V AM VA CL+ K +RP ++
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMN-----DADST-SVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 811 ILKALE 816
+ + L+
Sbjct: 297 VQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 27/306 (8%)
Query: 522 ESFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA 575
SF++ +L T +F + N + G G +++G + V K + + TE
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 576 ----YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
+ E+ +K H LV LLG + ++ LVY YMPNG SL + + D
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNG----SLLDRLSCLDGT 127
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++ A
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 692 GDAHQSRITRLL-RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV 750
A R++ + + G +T D+Y FG VLLE++TG + + Q+
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 751 KEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRY 810
+++ + ++ + K ++ D D V AM VA CL+ K +RP ++
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMN-----DADST-SVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 811 ILKALE 816
+ + L+
Sbjct: 297 VQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 27/306 (8%)
Query: 522 ESFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA 575
SF++ +L T +F + N + G G +++G + V K + + TE
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 576 ----YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
+ E+ +K H LV LLG + + + LVY YMPNG SL + + D
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGD-DLCLVYVYMPNG----SLLDRLSCLDGT 121
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++ A
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 692 GDAHQSRITRLL-RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV 750
A R++ + + G +T D+Y FG VLLE++TG + + Q+
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITGLPAVDEHREPQL 236
Query: 751 KEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRY 810
+++ + ++ + K ++ D D V AM VA CL+ K +RP ++
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMN-----DADST-SVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 811 ILKALE 816
+ + L+
Sbjct: 291 VQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 27/306 (8%)
Query: 522 ESFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA 575
SF++ +L T +F + N G G +++G + V K + + TE
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 576 ----YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
+ E+ +K H LV LLG + + + LVY Y PNG SL + + D
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGD-DLCLVYVYXPNG----SLLDRLSCLDGT 118
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++ A
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 692 GDAHQSRITRLL-RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV 750
A +R++ + + G +T D+Y FG VLLE++TG + + Q+
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALRGEITPKS--DIYSFGVVLLEIITGLPAVDEHREPQL 233
Query: 751 KEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRY 810
+++ + ++ + K + + D +E ++ VA CL+ K +RP ++
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDA---DSTSVEAXYS---VASQCLHEKKNKRPDIKK 287
Query: 811 ILKALE 816
+ + L+
Sbjct: 288 VQQLLQ 293
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 9/288 (3%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IPD+L TL LDL G +P G+ + L SL LS N +G +P
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 191 -XXXXXXXXXXXXTGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGLGTLSK--LQYLNVS 246
+G +P S L +L +LD+SSN +G I P L K LQ L +
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 247 NNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL 306
NN IP G++PS L L L+ + N L G + L
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 307 FPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELN 366
V L+ ++L N TG P L + L + +S N TG +P + + L
Sbjct: 460 M-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI-LK 517
Query: 367 ISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHSNASSLDSN 411
+S N F G + LG R +DL+ N F G +P + + + +N
Sbjct: 518 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IP L L +L L +SG IP SLG+L+ L L L N L G IP
Sbjct: 405 GKIPPTL-SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 463
Query: 191 XXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
TG IP+ NL+ + +S+N LTG IP +G L L L +SNNS
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSEL--RGLRSLQKFVIGNNFL---------- 298
+ +IPA+ G++P+ + + + F+ G ++
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 583
Query: 299 ---SGNL---------SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNN 346
+GNL +N T + I G T P D SM LD+S N
Sbjct: 584 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM---MFLDMSYNM 640
Query: 347 FTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPE 399
+G +P ++ + LN+ N G + +G R ++DLS N +GR+P+
Sbjct: 641 LSGYIPKEIGSMPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 695
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 55/304 (18%)
Query: 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG-VIPFSLGNLTN-L 168
D L+ + L + S G +P+ L +L LDL S + SG ++P N N L
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 169 TSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTG 228
LYL +NG TG IP PT L SL +S NYL+G
Sbjct: 394 QELYLQNNGFTGKIP-----------------------PT-LSNCSELVSLHLSFNYLSG 429
Query: 229 SIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSL 288
+IP LG+LSKL+ L + N L G +P EL +++L
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLE------------------------GEIPQELMYVKTL 465
Query: 289 QKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT 348
+ ++ N L+G + L + L I L N TG P + + L +L +S N+F+
Sbjct: 466 ETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 349 GPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNASSL 408
G +P + S + L+++ N+F G + + + + ++ N+ G+ YV+ +
Sbjct: 525 GNIPAELGDC-RSLIWLDLNTNLFNGTIPAAMFK-QSGKIAANFIAGK--RYVYIKNDGM 580
Query: 409 DSNC 412
C
Sbjct: 581 KKEC 584
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 35/347 (10%)
Query: 85 NGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFL--------LPGSIPDW 136
NGSV G S + S+N + + LT L S + +FL PG +
Sbjct: 87 NGSVSGFKCSASLTSLDLSRNS--LSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG- 143
Query: 137 LGQQLPTLQALDLRSCSISG--VIPFSLGN-LTNLTSLYLSDNGLTGTIPXXXXXXXXXX 193
G +L +L+ LDL + SISG V+ + L + L L +S N ++G +
Sbjct: 144 -GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV------DVSRC 196
Query: 194 XXXXXXXXXTGNIPTSFGLLKNLSSL---DISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
+ N T L + S+L DIS N L+G + T ++L+ LN+S+N
Sbjct: 197 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRG-LRSLQKFVIGNNFLSGNLSVNLFPT 309
IP G +P L G +L + N G + F +
Sbjct: 257 VGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP-FFGS 313
Query: 310 VSQLQIIVLRQNGFTGP-PPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNIS 368
S L+ + L N F+G P D L M L++LD+S N F+G LP S +N++ S + L++S
Sbjct: 314 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 373
Query: 369 QNMFYGGLTPVLGR-----FRLVDLSGNYFEGRVPEYVHSNASSLDS 410
N F G + P L + + + L N F G++P + SN S L S
Sbjct: 374 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL-SNCSELVS 419
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 26/279 (9%)
Query: 128 LLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXX 187
+L G IP L + TL+ L L ++G IP L N TNL + LS+N LTG IP
Sbjct: 450 MLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 188 XXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGL---------GTLS 238
+GNIP G ++L LD+++N G+IP + ++
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 568
Query: 239 KLQYLNVSNNSLASSIPA-------------QXXXXXXXXXXXXXXXXXXGSVPSELRGL 285
+Y+ + N+ + Q G
Sbjct: 569 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 628
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
S+ + N LSG + + ++ L I+ L N +G PD + + L +LD+S N
Sbjct: 629 GSMMFLDMSYNMLSGYIPKEI-GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 687
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR 384
G +P + S + T E+++S N G + P +G+F
Sbjct: 688 KLDGRIPQAMSAL-TMLTEIDLSNNNLSGPI-PEMGQFE 724
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 151/367 (41%), Gaps = 24/367 (6%)
Query: 67 DWPRKVDPCLVWNGVRCQN---GSVVGINISGF-------RRTRLGSQNPRFAADALVN- 115
D+P KV L N + + S+ G N+ G+ L + + D V+
Sbjct: 136 DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSR 195
Query: 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSD 175
+L + S IP +LG LQ LD+ +SG ++ T L L +S
Sbjct: 196 CVNLEFLDVSSNNFSTGIP-FLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
Query: 176 NGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGL 234
N G IP TG IP G L+ LD+S N+ G++PP
Sbjct: 254 NQFVGPIPPLPLKSLQYLSLAENKF--TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 311
Query: 235 GTLSKLQYLNVSNNSLASSIPAQXXXXX-XXXXXXXXXXXXXGSVPSELRGLR-SLQKFV 292
G+ S L+ L +S+N+ + +P G +P L L SL
Sbjct: 312 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 371
Query: 293 IGNNFLSGNLSVNLFPT-VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPL 351
+ +N SG + NL + LQ + L+ NGFTG P L + +L L +S N +G +
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 352 PNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVD---LSGNYFEGRVPEYVHSNASSL 408
P+S ++ + +L + NM G + L + ++ L N G +P + SN ++L
Sbjct: 432 PSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL-SNCTNL 489
Query: 409 DSNCLQN 415
+ L N
Sbjct: 490 NWISLSN 496
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 9/288 (3%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IPD+L TL LDL G +P G+ + L SL LS N +G +P
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 191 -XXXXXXXXXXXXTGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGLGTLSK--LQYLNVS 246
+G +P S L +L +LD+SSN +G I P L K LQ L +
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 247 NNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL 306
NN IP G++PS L L L+ + N L G + L
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 307 FPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELN 366
V L+ ++L N TG P L + L + +S N TG +P + + L
Sbjct: 463 M-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI-LK 520
Query: 367 ISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHSNASSLDSN 411
+S N F G + LG R +DL+ N F G +P + + + +N
Sbjct: 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IP L L +L L +SG IP SLG+L+ L L L N L G IP
Sbjct: 408 GKIPPTL-SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466
Query: 191 XXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
TG IP+ NL+ + +S+N LTG IP +G L L L +SNNS
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSEL--RGLRSLQKFVIGNNFL---------- 298
+ +IPA+ G++P+ + + + F+ G ++
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586
Query: 299 ---SGNL---------SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNN 346
+GNL +N T + I G T P D SM LD+S N
Sbjct: 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM---MFLDMSYNM 643
Query: 347 FTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHS 403
+G +P ++ + LN+ N G + +G R ++DLS N +GR+P+ + +
Sbjct: 644 LSGYIPKEIGSMPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 55/304 (18%)
Query: 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG-VIPFSLGNLTN-L 168
D L+ + L + S G +P+ L +L LDL S + SG ++P N N L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 169 TSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTG 228
LYL +NG TG IP PT L SL +S NYL+G
Sbjct: 397 QELYLQNNGFTGKIP-----------------------PT-LSNCSELVSLHLSFNYLSG 432
Query: 229 SIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSL 288
+IP LG+LSKL+ L + N L G +P EL +++L
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLE------------------------GEIPQELMYVKTL 468
Query: 289 QKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT 348
+ ++ N L+G + L + L I L N TG P + + L +L +S N+F+
Sbjct: 469 ETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 349 GPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNASSL 408
G +P + S + L+++ N+F G + + + + ++ N+ G+ YV+ +
Sbjct: 528 GNIPAELGDCR-SLIWLDLNTNLFNGTIPAAMFK-QSGKIAANFIAGK--RYVYIKNDGM 583
Query: 409 DSNC 412
C
Sbjct: 584 KKEC 587
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 35/347 (10%)
Query: 85 NGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFL--------LPGSIPDW 136
NGSV G S + S+N + + LT L S + +FL PG +
Sbjct: 90 NGSVSGFKCSASLTSLDLSRNS--LSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG- 146
Query: 137 LGQQLPTLQALDLRSCSISG--VIPFSLGN-LTNLTSLYLSDNGLTGTIPXXXXXXXXXX 193
G +L +L+ LDL + SISG V+ + L + L L +S N ++G +
Sbjct: 147 -GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV------DVSRC 199
Query: 194 XXXXXXXXXTGNIPTSFGLLKNLSSL---DISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
+ N T L + S+L DIS N L+G + T ++L+ LN+S+N
Sbjct: 200 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRG-LRSLQKFVIGNNFLSGNLSVNLFPT 309
IP G +P L G +L + N G + F +
Sbjct: 260 VGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP-FFGS 316
Query: 310 VSQLQIIVLRQNGFTGP-PPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNIS 368
S L+ + L N F+G P D L M L++LD+S N F+G LP S +N++ S + L++S
Sbjct: 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376
Query: 369 QNMFYGGLTPVLGR-----FRLVDLSGNYFEGRVPEYVHSNASSLDS 410
N F G + P L + + + L N F G++P + SN S L S
Sbjct: 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL-SNCSELVS 422
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 26/279 (9%)
Query: 128 LLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXX 187
+L G IP L + TL+ L L ++G IP L N TNL + LS+N LTG IP
Sbjct: 453 MLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 188 XXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGL---------GTLS 238
+GNIP G ++L LD+++N G+IP + ++
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571
Query: 239 KLQYLNVSNNSLASSIPA-------------QXXXXXXXXXXXXXXXXXXGSVPSELRGL 285
+Y+ + N+ + Q G
Sbjct: 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
S+ + N LSG + + ++ L I+ L N +G PD + + L +LD+S N
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEI-GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR 384
G +P + S + T E+++S N G + P +G+F
Sbjct: 691 KLDGRIPQAMSAL-TMLTEIDLSNNNLSGPI-PEMGQFE 727
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 151/367 (41%), Gaps = 24/367 (6%)
Query: 67 DWPRKVDPCLVWNGVRCQN---GSVVGINISGF-------RRTRLGSQNPRFAADALVN- 115
D+P KV L N + + S+ G N+ G+ L + + D V+
Sbjct: 139 DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSR 198
Query: 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSD 175
+L + S IP +LG LQ LD+ +SG ++ T L L +S
Sbjct: 199 CVNLEFLDVSSNNFSTGIP-FLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
Query: 176 NGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGL 234
N G IP TG IP G L+ LD+S N+ G++PP
Sbjct: 257 NQFVGPIPPLPLKSLQYLSLAENKF--TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
Query: 235 GTLSKLQYLNVSNNSLASSIPAQXXXXX-XXXXXXXXXXXXXGSVPSELRGLR-SLQKFV 292
G+ S L+ L +S+N+ + +P G +P L L SL
Sbjct: 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374
Query: 293 IGNNFLSGNLSVNLFPT-VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPL 351
+ +N SG + NL + LQ + L+ NGFTG P L + +L L +S N +G +
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 352 PNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVD---LSGNYFEGRVPEYVHSNASSL 408
P+S ++ + +L + NM G + L + ++ L N G +P + SN ++L
Sbjct: 435 PSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL-SNCTNL 492
Query: 409 DSNCLQN 415
+ L N
Sbjct: 493 NWISLSN 499
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G +G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTA----PEAINYG---- 185
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 186 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 232
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 233 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 32 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 89
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 141
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYG---- 193
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 194 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 240
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 241 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 274
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 26 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 83
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 135
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYG---- 187
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 188 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 234
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 235 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 268
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 25 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 82
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 134
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYG---- 186
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 187 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 233
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 234 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYG---- 185
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 186 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 232
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 233 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 69.3 bits (168), Expect = 8e-12, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYG---- 185
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 186 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 232
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 233 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 29 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 138
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYG---- 190
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 191 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 237
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 238 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 19 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 76
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 128
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYG---- 180
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 181 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 227
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 228 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 261
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 30 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 87
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 139
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYG---- 191
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 192 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 238
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 239 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYG---- 185
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 186 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 232
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 233 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 30 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 87
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 139
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYG---- 191
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 192 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 238
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 239 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 33 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 90
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 142
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYG---- 194
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 195 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 241
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 242 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 275
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 34 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 91
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEER---NYIHR 143
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYG---- 195
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 196 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 242
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 243 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 276
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 20 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 77
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 129
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
+++A++IL+ D ++ +E A+ G + T P++ G
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYG---- 181
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T T DV+ FG +L E+VT G++ ++ +V + LE+ ++V P
Sbjct: 182 -TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------RMVRP 228
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ EE++ + R C +P RP Y+ LE+
Sbjct: 229 -----DNCPEELYQL---MRLCWKERPEDRPTFDYLRSVLED 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 32/301 (10%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAY 576
T G S Y + D + + + G G+++ G+ + + V +K + +++ E +
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 302
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E ++ H LV LLG C RE +++ ++M G+L L E + Q ++
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-----RECNRQEVNA 356
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ L +A + + YL + F+HR++ A + L+ + V++ GD +
Sbjct: 357 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILE 755
+ + ++ + S + DV+ FG +L E+ T M D +QV E+LE
Sbjct: 414 AHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 472
Query: 756 QTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKAL 815
+ D + E E+V+ + R+C P+ RP I +A
Sbjct: 473 K-----------------DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAF 512
Query: 816 E 816
E
Sbjct: 513 E 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 32/301 (10%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAY 576
T G S Y + D + + + G G+++ G+ + + V +K + +++ E +
Sbjct: 201 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 260
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E ++ H LV LLG C RE +++ ++M G+L L E + Q ++
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-----RECNRQEVNA 314
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ L +A + + YL + F+HR++ A + L+ + V++ GD +
Sbjct: 315 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILE 755
+ + ++ + S + DV+ FG +L E+ T M D +QV E+LE
Sbjct: 372 AHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 430
Query: 756 QTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKAL 815
+ D + E E+V+ + R+C P+ RP I +A
Sbjct: 431 K-----------------DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAF 470
Query: 816 E 816
E
Sbjct: 471 E 471
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 32/301 (10%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAY 576
T G S Y + D + + + G G+++ G+ + + V +K + +++ E +
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 263
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E ++ H LV LLG C RE +++ ++M G+L L E + Q +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-----RECNRQEVSA 317
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ L +A + + YL + F+HR++ A + L+ + V++ GD +
Sbjct: 318 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILE 755
+ + ++ + S + DV+ FG +L E+ T M D +QV E+LE
Sbjct: 375 AHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433
Query: 756 QTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKAL 815
+ D + E E+V+ + R+C P+ RP I +A
Sbjct: 434 K-----------------DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAF 473
Query: 816 E 816
E
Sbjct: 474 E 474
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG---GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D + I G G + R G + +++++ D + + +L E+ ++ H +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ-DFHAERVNEFLREVAIMKRLRHPNI 96
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V +G + N +V +Y+ G SLYR + + LD RL +A A+G++
Sbjct: 97 VLFMGAVTQPPNLS-IVTEYLSRG----SLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQ 711
YLH+ P VHR++++ ++L+D K+ V+ VC G ++RL S +
Sbjct: 152 YLHNR-NPPIVHRNLKSPNLLVDKKYTVK------VCDFG-------LSRLKASTFLSSK 197
Query: 712 GSSGSLTATCPY-----------DVYCFGKVLLELVTGKMGISASSDAQV 750
++G+ P DVY FG +L EL T + + AQV
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG---GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D + I G G + R G + +++++ D + + +L E+ ++ H +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ-DFHAERVNEFLREVAIMKRLRHPNI 96
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V +G + N +V +Y+ G SLYR + + LD RL +A A+G++
Sbjct: 97 VLFMGAVTQPPNLS-IVTEYLSRG----SLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQ 711
YLH+ P VHRD+++ ++L+D K+ V+ VC G ++RL +
Sbjct: 152 YLHNR-NPPIVHRDLKSPNLLVDKKYTVK------VCDFG-------LSRLKASXFLXSK 197
Query: 712 GSSGSLTATCPY-----------DVYCFGKVLLELVTGKMGISASSDAQV 750
++G+ P DVY FG +L EL T + + AQV
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 69/307 (22%)
Query: 535 DFSDANL---IKNGHSGDLFRGILEGG-IPVVIKRID--------LQSVKTEAYLLELDF 582
DF++ L I G G ++R G + V R D +++V+ EA L
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKL----- 59
Query: 583 FSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKI 642
F+ + H ++ L G C++ N LV ++ G L+ L K D L ++W
Sbjct: 60 FAMLKHPNIIALRGVCLKEPN-LCLVMEFARGGPLNRVLSGKRIPPDIL--VNW------ 110
Query: 643 AIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL 702
A+ A G++YLH E +P +HRD+++S+IL+ K E G LS + D +R
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN--GDLSNKILKITDFGLAR---- 164
Query: 703 LRLPQSSEQGSSGSLTATCPY-----------DVYCFGKVLLELVTGKM---GISASSDA 748
++++ ++G+ P DV+ +G +L EL+TG++ GI + A
Sbjct: 165 -EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223
Query: 749 QVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLM 808
+ + LP S + L+E+ W NP P RP
Sbjct: 224 YGVAMNKLALPIPSTCPEPFAK------------LMEDCW----------NPDPHSRPSF 261
Query: 809 RYILKAL 815
IL L
Sbjct: 262 TNILDQL 268
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 126/298 (42%), Gaps = 32/298 (10%)
Query: 521 GESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLE 579
G S Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 1 GPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVNAVVL 114
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
L +A + + YL + F+HRD+ A + L+ + V++ GD +
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 171
Query: 700 TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTL 758
+ ++ + S + DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 172 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-- 228
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 229 ---------------DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 32/298 (10%)
Query: 521 GESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLE 579
G S Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVL 114
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
L +A + + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
Query: 700 TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTL 758
+ ++ + S + DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 172 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-- 228
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 229 ---------------DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 79 LLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 132
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 232
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 233 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 79 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 132
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 232
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 233 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 86
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 87 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 140
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 141 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 196
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 240
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 241 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 79 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 132
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 232
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 233 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 74 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 127
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 227
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 228 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 77
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 78 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 131
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 132 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 187
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 231
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 232 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 74 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 127
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 227
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 228 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 76 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 129
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 185
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 229
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 230 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 76 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 129
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 185
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 229
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 230 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 12/224 (5%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 92
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C E ++V +YMP G+L L R+ N E+ + + L +A + + YL
Sbjct: 93 LLGVCT-LEPPFYIVTEYMPYGNLLDYL-RECNREE----VTAVVLLYMATQISSAMEYL 146
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 147 EKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 202
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQ 756
T + DV+ FG +L E+ T M D +QV ++LE+
Sbjct: 203 LAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEK 246
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 74 LLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 127
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 227
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 228 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 74 LLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 127
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 227
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 228 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 74 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 127
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 227
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 228 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 74 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 127
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 183
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 227
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 228 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 79 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 132
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-S 188
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 232
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 233 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 76 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 129
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + + ++ + S
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-S 185
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 229
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 230 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q ++ + L +A + + YL
Sbjct: 79 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMATQISSAMEYL 132
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + ++ + S
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 188
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---------------- 232
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 233 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 72 LLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 125
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + ++ + S
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 181
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---------------- 225
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 226 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 72 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 125
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + ++ + S
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-S 181
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---------------- 225
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 226 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 32/284 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 72 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 125
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
+ F+HRD+ A + L+ + V++ GD + + ++ + S
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-S 181
Query: 714 SGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILEQTLPYISIYDKELVTKI 772
+ DV+ FG +L E+ T M D +QV E+LE+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---------------- 225
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
D + E E+V+ + R+C P+ RP I +A E
Sbjct: 226 -DYRMERPEGCPEKVYEL---MRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 147
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLS----EVCAQGGDAHQSRITRLLRLPQS 708
L + FVHRD+ A + +LD+KF V++ + H +L +
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 709 SEQGSSGSLTATCPYDVYCFGKVLLELVT 737
E + T DV+ FG +L EL+T
Sbjct: 205 LESLQTQKFTTKS--DVWSFGVLLWELMT 231
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ V +K + S+ EA+L E + + H +LV L H + +
Sbjct: 193 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEP 250
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L ++ L L + + AEG++++ ++HR
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YIHR 302
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSS-EQGSSGSLTATCPY 723
D++A++IL+ S S VC + D +R+ + ++ E + GS T
Sbjct: 303 DLRAANILV---------SASLVC-KIADFGLARVGAKFPIKWTAPEAINFGSFTIKS-- 350
Query: 724 DVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDED 782
DV+ FG +L+E+VT G++ S+ +V LE+ ++ P E+
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------------RMPRP-----EN 393
Query: 783 LLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
EE++ + + C +P RP YI L++
Sbjct: 394 CPEELYNIMM---RCWKNRPEERPTFEYIQSVLDD 425
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 166
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 167
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 148
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 148
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 140
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 147
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 149
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 207 LE-SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 145
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 146
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 207
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 265 LE-SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ Y
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKY 143
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL-LRLP-QSSE 710
L + FVHRD+ A + +LD+KF V++ + S + +LP +
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 711 QGSSGSLTATCPYDVYCFGKVLLELVT 737
S + T DV+ FG +L EL+T
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 146
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 204 LE-SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 118/275 (42%), Gaps = 34/275 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ V +K + S+ EA+L E + + H +LV L H + +
Sbjct: 199 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEP 256
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L ++ L L + + AEG++++ ++HR
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YIHR 308
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSS-EQGSSGSLTATCPY 723
D++A++IL+ ++ + + +R + ++ E + GS T
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS-- 366
Query: 724 DVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDED 782
DV+ FG +L+E+VT G++ S+ +V LE+ ++ P E+
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------------RMPRP-----EN 409
Query: 783 LLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
EE++ + + C +P RP YI L++
Sbjct: 410 CPEELYNIMM---RCWKNRPEERPTFEYIQSVLDD 441
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 153
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 211 LE-SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 148
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 206 LE-SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 149
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 207 LE-SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 541 LIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVPL 594
+I GH G ++ G L +G I +K ++ + E +L E SH ++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSY 652
LG C+ E +V YM +GDL + + +T+ T DL + + A+G+ +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMKF 148
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLPQSS 709
L + FVHRD+ A + +LD+KF V++ G ++ + D+ ++ L + +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ S + T DV+ FG +L EL+T
Sbjct: 206 LE-SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 54/288 (18%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
+ G G+++ G G V IK + ++ EA+L E K+ H +LV L + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 332
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
E ++V +YM G L L +T L L + +A A G++Y+ + +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNY 384
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTAT 720
VHRD++A++IL+ + ++ + RL+ + ++ QG+ + T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWT 431
Query: 721 CPY-----------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDKELV 769
P DV+ FG +L EL T + +PY + ++E++
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTT-----------------KGRVPYPGMVNREVL 474
Query: 770 TKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ + E ++ + C +P RP Y+ LE+
Sbjct: 475 DQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 39/226 (17%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
NG G+++ G G V IK + ++ E++L E K+ H +LV L + + E
Sbjct: 19 NGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEE 76
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + + ++L + +A A G++Y+ + ++H
Sbjct: 77 PIYIVTEYMNKGSLLDFL-----KDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIH 128
Query: 664 RDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP 722
RD+++++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 129 RDLRSANILVGNGLICKIADFG-------------LARLIEDNEXTARQGAKFPIKWTAP 175
Query: 723 -----------YDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQ 756
DV+ FG +L ELVT G++ ++ +E+LEQ
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQ 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 61/282 (21%), Positives = 119/282 (42%), Gaps = 48/282 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ V +K + S+ EA+L E + + H +LV L H + +
Sbjct: 26 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEP 83
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L ++ L L + + AEG++++ ++HR
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQR---NYIHR 135
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A++IL+ ++ +E A+ G + T P++ GS
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFGS--- 188
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
T DV+ FG +L+E+VT G++ S+ +V LE+ ++ P
Sbjct: 189 --FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------------RMPRP 234
Query: 776 SLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
E+ EE++ + + C +P RP YI L++
Sbjct: 235 -----ENCPEELYNIMM---RCWKNRPEERPTFEYIQSVLDD 268
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 76
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 77 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 127
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC 721
+HRD+ A + L+ + +++ D + S + +S + S S ++
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS- 186
Query: 722 PYDVYCFGKVLLELVT-GKMGISASSDAQVKE 752
DV+ FG ++ E+ + GK+ S+++V E
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 73 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 124
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 182 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 220
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 221 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 68 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 177 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 215
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 216 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 96 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 147
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 205 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 243
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 244 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 95 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 146
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 147 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 204 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 242
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 243 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 70 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 121
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 122 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 179 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 217
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 218 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 73 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 124
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 182 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 220
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 221 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 71
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 72 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 122
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC 721
+HRD+ A + L+ + +++ D + S + +S + S S ++
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS- 181
Query: 722 PYDVYCFGKVLLELVT-GKMGISASSDAQVKE 752
DV+ FG ++ E+ + GK+ S+++V E
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 73
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 124
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC 721
+HRD+ A + L+ + +++ D + S + +S + S S ++
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS- 183
Query: 722 PYDVYCFGKVLLELVT-GKMGISASSDAQVKE 752
DV+ FG ++ E+ + GK+ S+++V E
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
+ G G+++ G G V IK + ++ EA+L E K+ H +LV L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
E ++V +YM G L L +T L L + +A A G++Y+ + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNY 301
Query: 662 VHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
VHRD++A++IL+ + ++ +E A+ G + T P+++ G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 357
Query: 714 SGSLTATCPYDVYCFGKVLLELVT 737
T DV+ FG +L EL T
Sbjct: 358 -----FTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
+ G G+++ G G V IK + ++ EA+L E K+ H +LV L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
E ++V +YM G L L +T L L + +A A G++Y+ + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNY 301
Query: 662 VHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
VHRD++A++IL+ + ++ +E A+ G + T P+++ G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 357
Query: 714 SGSLTATCPYDVYCFGKVLLELVT 737
T DV+ FG +L EL T
Sbjct: 358 -----FTIKSDVWSFGILLTELTT 376
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I S+ + ++ E + K+SH +LV L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE- 93
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 94 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 144
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC 721
+HRD+ A + L+ + +++ D + S + +S + S S ++
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS- 203
Query: 722 PYDVYCFGKVLLELVT-GKMGISASSDAQVKE 752
DV+ FG ++ E+ + GK+ S+++V E
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 235
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 46/295 (15%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 68 LFMGYSTAPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSE 710
LH + +HRD+++++I L + V++G L+ V ++ +HQ L + E
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDK 766
+ PY DVY FG VL EL+TG+ LPY +I ++
Sbjct: 177 ---VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNINNR 215
Query: 767 ELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILKALE 816
+ + +V + + L +V AM + CL K RPL IL ++E
Sbjct: 216 DQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
+ G G+++ G G V IK + ++ EA+L E K+ H +LV L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
E ++V +YM G L L +T L L + +A A G++Y+ + +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNY 301
Query: 662 VHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
VHRD++A++IL+ + ++ +E A+ G + T P+++ G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 357
Query: 714 SGSLTATCPYDVYCFGKVLLELVT 737
T DV+ FG +L EL T
Sbjct: 358 -----FTIKSDVWSFGILLTELTT 376
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 44/286 (15%)
Query: 542 IKNGHSGDLFRGILEGGIPV-VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCME 600
I +G G +++G G + V ++K +D + +A+ E+ K H ++ +G+ M
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP 660
++N +V ++ L L+ + Q +D IA A+G+ YLH +
Sbjct: 103 KDNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLID------IARQTAQGMDYLHAKN--- 152
Query: 661 FVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRI---TRLLRLPQSSEQGSSG 715
+HRD+++++I L + V++G L+ V ++ + Q + L P+ +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 716 SLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDP 775
+ DVY +G VL EL+TG+ LPY I +++ + +V
Sbjct: 213 PFSFQS--DVYSYGIVLYELMTGE------------------LPYSHINNRDQIIFMVGR 252
Query: 776 SLIIDEDLLEEVW-----AMAIVARSCLNPKPTRRPLMRYILKALE 816
+ L +++ AM + C+ RPL IL ++E
Sbjct: 253 GYASPD--LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 62/303 (20%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 96 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 147
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQG 712
LH + +HRD+++++I L + V++G G +SR + + Q S
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDF------GLATEKSRWSGSHQFEQLS--- 195
Query: 713 SSGSLTATCPY--------------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
GS+ P DVY FG VL EL+TG+ L
Sbjct: 196 --GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------L 235
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILK 813
PY +I +++ + +V + + L +V AM + CL K RPL IL
Sbjct: 236 PYSNINNRDQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 293
Query: 814 ALE 816
++E
Sbjct: 294 SIE 296
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G V +K + ++ +A+L E + + H +LV L + RE
Sbjct: 24 GQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VVTREEP 82
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM G L L + L L + + AEG++Y+ + ++HR
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NYIHR 134
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A+++L+ + ++ +E A+ G + T P++ G
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFG---- 186
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQ 756
T DV+ FG +L E+VT GK+ ++A V L Q
Sbjct: 187 -CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 62/303 (20%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 88 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 139
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQG 712
LH + +HRD+++++I L + V++G G +SR + + Q S
Sbjct: 140 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDF------GLATEKSRWSGSHQFEQLS--- 187
Query: 713 SSGSLTATCPY--------------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
GS+ P DVY FG VL EL+TG+ L
Sbjct: 188 --GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------L 227
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILK 813
PY +I +++ + +V + + L +V AM + CL K RPL IL
Sbjct: 228 PYSNINNRDQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 285
Query: 814 ALE 816
++E
Sbjct: 286 SIE 288
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 62/303 (20%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 68 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQG 712
LH + +HRD+++++I L + V++G G +SR + + Q S
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDF------GLATEKSRWSGSHQFEQLS--- 167
Query: 713 SSGSLTATCPY--------------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
GS+ P DVY FG VL EL+TG+ L
Sbjct: 168 --GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ------------------L 207
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEV-----WAMAIVARSCLNPKPTRRPLMRYILK 813
PY +I +++ + +V + + L +V AM + CL K RPL IL
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPD--LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
Query: 814 ALE 816
++E
Sbjct: 266 SIE 268
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 26 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 84
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 85 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 135
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYD 724
D+ A + L++D+ V++ D + S + + S + S ++ D
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS-KSD 194
Query: 725 VYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDL 783
++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 195 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS------------- 238
Query: 784 LEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREEN 826
E+V+ + SC + K RP + + L N L V+ EE+
Sbjct: 239 -EKVYT---IMYSCWHEKADERPTFKIL---LSNILDVMDEES 274
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 19 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 77
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 78 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 128
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYD 724
D+ A + L++D+ V++ D + S + + S + S ++ D
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS-KSD 187
Query: 725 VYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDL 783
++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS------------- 231
Query: 784 LEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREEN 826
E+V+ + SC + K RP + + L N L V+ EE+
Sbjct: 232 -EKVYT---IMYSCWHEKADERPTFKIL---LSNILDVMDEES 267
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 35 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 93
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 94 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 144
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYD 724
D+ A + L++D+ V++ D + S + + S + S ++ D
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS-KSD 203
Query: 725 VYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDL 783
++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS------------- 247
Query: 784 LEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREEN 826
E+V+ + SC + K RP + + L N L V+ EE+
Sbjct: 248 -EKVYT---IMYSCWHEKADERPTFKIL---LSNILDVMDEES 283
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 73
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 74 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 124
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYD 724
D+ A + L++D+ V++ D + S + + S + S ++ D
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS-KSD 183
Query: 725 VYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDL 783
++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS------------- 227
Query: 784 LEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREEN 826
E+V+ + SC + K RP + + L N L V+ EE+
Sbjct: 228 -EKVYT---IMYSCWHEKADERPTFKIL---LSNILDVMDEES 263
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 561 VVIKRIDLQSVKT--EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG--- 615
V IKRI+L+ +T + L E+ S+ H +V + ++ E +LV K + G
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVL 96
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
D+ + K + + LD T I EGL YLH +HRDV+A +ILL +
Sbjct: 97 DIIKHIVAKGEHKSGV--LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGE 151
Query: 676 KFEVRLGS--LSEVCAQGGDAHQSRITRLL------RLPQSSEQGSSGSLTATCPYDVYC 727
V++ +S A GGD ++++ + P+ EQ A D++
Sbjct: 152 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA----DIWS 207
Query: 728 FGKVLLELVTGKMGISASSDAQVKEILEQTLP---YISIYDKELVTK 771
FG +EL TG +V + Q P + DKE++ K
Sbjct: 208 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKK 254
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 561 VVIKRIDLQSVKT--EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG--- 615
V IKRI+L+ +T + L E+ S+ H +V + ++ E +LV K + G
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVL 101
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
D+ + K + + LD T I EGL YLH +HRDV+A +ILL +
Sbjct: 102 DIIKHIVAKGEHKSGV--LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGE 156
Query: 676 KFEVRLGS--LSEVCAQGGDAHQSRITRLL------RLPQSSEQGSSGSLTATCPYDVYC 727
V++ +S A GGD ++++ + P+ EQ A D++
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA----DIWS 212
Query: 728 FGKVLLELVTGKMGISASSDAQVKEILEQTLP---YISIYDKELVTK 771
FG +EL TG +V + Q P + DKE++ K
Sbjct: 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKK 259
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 74/191 (38%), Gaps = 48/191 (25%)
Query: 112 ALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSL 171
A+ LT L + + G+IPD+L Q+ TL LD ++SG +P S+ +L NL +
Sbjct: 96 AIAKLTQLHYLYITHTNVSGAIPDFL-SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154
Query: 172 YLSDNGLTGTIPXXXXXXXXXXXXXXXX-XXXTGNIPTSF-------------------- 210
N ++G IP TG IP +F
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS 214
Query: 211 --------------------------GLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLN 244
GL KNL+ LD+ +N + G++P GL L L LN
Sbjct: 215 VLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 245 VSNNSLASSIP 255
VS N+L IP
Sbjct: 275 VSFNNLCGEIP 285
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 103/265 (38%), Gaps = 15/265 (5%)
Query: 136 WLGQQLPT-LQALDLRSCSISGV-------IPFSLGNLTNLTSLYLSD-NGLTGTIPXXX 186
WLG T Q + + +SG+ IP SL NL L LY+ N L G IP
Sbjct: 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97
Query: 187 XXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVS 246
+G IP +K L +LD S N L+G++PP + +L L +
Sbjct: 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 247 NNSLASSIP-AQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVN 305
N ++ +IP + G +P L +L + N L G+ SV
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASV- 215
Query: 306 LFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVEL 365
LF + Q I L +N V S L LD+ N G LP + + L
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLGKVGLSK-NLNGLDLRNNRIYGTLPQGLTQLKF-LHSL 273
Query: 366 NISQNMFYGGLTPVLGRFRLVDLSG 390
N+S N G + P G + D+S
Sbjct: 274 NVSFNNLCGEI-PQGGNLQRFDVSA 297
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 74
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV ++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 75 QAPICLVTEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 125
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC 721
+HRD+ A + L+ + +++ D + S + +S + S S ++
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS- 184
Query: 722 PYDVYCFGKVLLELVT-GKMGISASSDAQVKE 752
DV+ FG ++ E+ + GK+ S+++V E
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 57/294 (19%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 35 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 93
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 94 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 144
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCP-- 722
D+ A + L++D+ V++ D SR +L ++S GS + + P
Sbjct: 145 DLAARNCLVNDQGVVKV----------SDFGLSRY--VLDDEETSSVGSKFPVRWSPPEV 192
Query: 723 ---------YDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKI 772
D++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS-- 247
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREEN 826
E+V+ + SC + K RP + + L N L V+ EE+
Sbjct: 248 ------------EKVYT---IMYSCWHEKADERPTFKIL---LSNILDVMDEES 283
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 22 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 79
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L +T L L + +A A G++Y+ + +VHR
Sbjct: 80 IYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 131
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 132 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
+ G G+++ G G V IK + ++ EA+L E K+ H +LV L + +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 250
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
E ++V +YM G L L + L L + +A A G++Y+ + +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNY 302
Query: 662 VHRDVQASSILLDDKFEVR-----LGSL---SEVCAQGGDAHQSRITRLLRLPQSSEQGS 713
VHRD++A++IL+ + + LG L +E A+ G + T P+++ G
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT----APEAALYGR 358
Query: 714 SGSLTATCPYDVYCFGKVLLELVT 737
T DV+ FG +L EL T
Sbjct: 359 -----FTIKSDVWSFGILLTELTT 377
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 40/296 (13%)
Query: 539 ANLIKNGHSGDLFRGIL--EGG--IPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARL 591
++ G G + G L E G + V +K + L + + E +L E SH +
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 592 VPLLGHCMERENEK----FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
+ LLG C+E ++ ++ +M GDL + L + E + + T LK + A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY-SRLETGPKHIPLQTLLKFMVDIA 157
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLRL 705
G+ YL + F+HRD+ A + +L D V + LS+ G Q RI ++
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 706 PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYD 765
+ E S T DV+ FG + E+ T M PY + +
Sbjct: 215 WIAIE--SLADRVYTSKSDVWAFGVTMWEIATRGMT-----------------PYPGVQN 255
Query: 766 KELVTKIVDPS-LIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
E+ ++ L ED L+E++ + SC P RP + LE L+
Sbjct: 256 HEMYDYLLHGHRLKQPEDCLDELYE---IMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 61/301 (20%)
Query: 535 DFSDANLI---KNGHSGDLFRGILEGGIPVV--IKRIDLQSVKTEAYLLELDFFSKVSHA 589
DF N + HSG+L++G +G VV +K D + K+ + E SH
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 590 RLVPLLGHCMEREN-EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
++P+LG C L+ +MP G L + L+ TN +D +K A+ A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-----VVDQSQAVKFALDMAR 122
Query: 649 GLSYLHHECTL-PFVHRD-VQASSILLDDKFEVRLG---------SLSEVCAQGGDAHQS 697
G+++LH TL P + R + + S+++D+ R+ S + A A ++
Sbjct: 123 GMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEA 179
Query: 698 RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEILE 755
L + P+ + + S+ D++ F +L ELVT ++ + S+ ++ K LE
Sbjct: 180 ----LQKKPEDTNRRSA---------DMWSFAVLLWELVTREVPFADLSNMEIGMKVALE 226
Query: 756 QTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKAL 815
P I V+K++ + C+N P +RP I+ L
Sbjct: 227 GLRPTIPPGISPHVSKLM---------------------KICMNEDPAKRPKFDMIVPIL 265
Query: 816 E 816
E
Sbjct: 266 E 266
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 33/278 (11%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
+G G + G +G V +K I S+ + + E K+SH +LV G C +E
Sbjct: 18 SGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC-SKEY 76
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +Y+ NG L + L + L+ L++ EG+++L F+H
Sbjct: 77 PIYIVTEYISNGCLLNYLRSHG------KGLEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 664 RDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY 723
RD+ A + L+D V++ D + S + + S+ + +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE-VFHYFKYSSKS 186
Query: 724 DVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDED 782
DV+ FG ++ E+ + GKM PY + E+V K+ +
Sbjct: 187 DVWAFGILMWEVFSLGKM------------------PYDLYTNSEVVLKVSQGHRLYRPH 228
Query: 783 LLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
L + + + SC + P +RP + +L ++E PL+
Sbjct: 229 LASD--TIYQIMYSCWHELPEKRPTFQQLLSSIE-PLR 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 78
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 79 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 129
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYD 724
D+ A + L++D+ V++ D + S + + S + S ++ D
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS-KSD 188
Query: 725 VYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDL 783
++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS------------- 232
Query: 784 LEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREENSG 828
E+V+ + SC + K RP + + L N L V+ E G
Sbjct: 233 -EKVYT---IMYSCWHEKADERPTFKIL---LSNILDVMDENLYG 270
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 54/299 (18%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ L L+ + T+ +++ L + IA A G+ Y
Sbjct: 72 LFMGYSTK--PQLAIVTQWCEGSSLYHHLH-ASETKFEMKKL-----IDIARQTARGMDY 123
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRI---TRLLRLPQ 707
LH + +HRD+++++I L + V++G L+ V ++ +HQ + L P+
Sbjct: 124 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 708 SSEQGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISI 763
S PY DVY FG VL EL+TG+ LPY +I
Sbjct: 181 VIRMQDSN------PYSFQSDVYAFGIVLYELMTGQ------------------LPYSNI 216
Query: 764 YDKELVTKIVD-PSLIIDEDLLEEVWA-----MAIVARSCLNPKPTRRPLMRYILKALE 816
+++ + ++V SL D L +V + M + CL K RP IL +E
Sbjct: 217 NNRDQIIEMVGRGSLSPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 561 VVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V IK+I+ +S + +A+++EL S+V+H +V L G C+ N LV +Y G S
Sbjct: 35 VAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGG----S 86
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
LY + + L + + ++G++YLH +HRD++ ++LL V
Sbjct: 87 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL-----VA 141
Query: 681 LGSLSEVCAQGGDAH-QSRIT--RLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
G++ ++C G Q+ +T + + E + + C DV+ +G +L E++T
Sbjct: 142 GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC--DVFSWGIILWEVIT 199
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 73
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEASV--- 124
Query: 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC 721
+HRD+ A + L+ + +++ D + S + +S + S S ++
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS- 183
Query: 722 PYDVYCFGKVLLELVT-GKMGISASSDAQVKE 752
DV+ FG ++ E+ + GK+ S+++V E
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 83
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L +T L L + ++ A G++Y+ + +VHR
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVER---MNYVHR 135
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 136 DLRAANILVGENLVCKVADFG-------------LARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 83
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L +T L L + ++ A G++Y+ + +VHR
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVER---MNYVHR 135
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 136 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 561 VVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V IK+I+ +S + +A+++EL S+V+H +V L G C+ N LV +Y G S
Sbjct: 34 VAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGG----S 85
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
LY + + L + + ++G++YLH +HRD++ ++LL V
Sbjct: 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL-----VA 140
Query: 681 LGSLSEVCAQGGDAH-QSRIT--RLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
G++ ++C G Q+ +T + + E + + C DV+ +G +L E++T
Sbjct: 141 GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC--DVFSWGIILWEVIT 198
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 110/235 (46%), Gaps = 21/235 (8%)
Query: 530 LAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKT--EAYLLELDFFSKV 586
++++ F + NG +++G+ + G+ V +K + L S + + E+ ++
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 587 SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKT--NTEDDLQSLDWITRLKIAI 644
H +V L + EN+ LV+++M N DL + +T NT L+ L+ + + +
Sbjct: 61 KHENIVRLYD-VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLE-LNLVKYFQWQL 117
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG---GDAHQSRITR 701
+GL++ H L HRD++ ++L++ + +++LG A G +T
Sbjct: 118 --LQGLAFCHENKIL---HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 702 LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSD-AQVKEILE 755
R P GS T + D++ G +L E++TGK ++D Q+K I +
Sbjct: 173 WYRAPDVL----MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFD 223
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 19 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 76
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+V +YM G L L +T L L + +A A G++Y+ + +VHR
Sbjct: 77 IXIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 128
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 129 DLRAANILVGENLVCKVADFG-------------LARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 540 NLIKNGHSGDLFRGILEGG-----IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLV 592
+I G G++++G+L+ +PV IK + + + +L E + SH ++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
L G + + ++ +YM NG L L K + + L + L+ G A G+ Y
Sbjct: 110 RLEG-VISKYKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLR---GIAAGMKY 162
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSS 709
L + +VHRD+ A +IL++ ++ D + T ++P +
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVT 737
E S T+ DV+ FG V+ E++T
Sbjct: 220 EAISYRKFTSAS--DVWSFGIVMWEVMT 245
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 18 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 75
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 76 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 127
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 128 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 20 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 77
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 78 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 129
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 130 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVCEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 54/280 (19%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRP 78
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
F++ +YM NG L + L R+ Q L L++ E + YL + F+HR
Sbjct: 79 IFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLHR 129
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCP-- 722
D+ A + L++D+ V++ D SR +L +S +GS + + P
Sbjct: 130 DLAARNCLVNDQGVVKV----------SDFGLSRY--VLDDEYTSSRGSKFPVRWSPPEV 177
Query: 723 ---------YDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQTLPYISIYDKELVTKI 772
D++ FG ++ E+ + GKM ++++ E + Q L +Y L +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLAS-- 232
Query: 773 VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYIL 812
E+V+ + SC + K RP + +L
Sbjct: 233 ------------EKVYT---IMYSCWHEKADERPTFKILL 257
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 39/251 (15%)
Query: 572 KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
K + + E+ S ++H +V L G N +V +++P GDL L D
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLL------DKA 116
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+ W +L++ + A G+ Y+ ++ P VHRD+++ +I L L + VCA+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS-----LDENAPVCAKV 170
Query: 692 GDAHQSR-----ITRLLRLPQ--SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA 744
D S+ ++ LL Q + E + + T D Y F +L ++TG+
Sbjct: 171 ADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 745 SSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTR 804
S ++K +I++ +E + I ED + V C + P +
Sbjct: 231 YSYGKIK--------FINMIREEGLRPT------IPEDCPPR---LRNVIELCWSGDPKK 273
Query: 805 RPLMRYILKAL 815
RP YI+K L
Sbjct: 274 RPHFSYIVKEL 284
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D+ A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLAAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 39/251 (15%)
Query: 572 KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
K + + E+ S ++H +V L G N +V +++P GDL L D
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLL------DKA 116
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+ W +L++ + A G+ Y+ ++ P VHRD+++ +I L L + VCA+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS-----LDENAPVCAKV 170
Query: 692 GDAHQSR-----ITRLLRLPQ--SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA 744
D S+ ++ LL Q + E + + T D Y F +L ++TG+
Sbjct: 171 ADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 745 SSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTR 804
S ++K +I++ +E + I ED + V C + P +
Sbjct: 231 YSYGKIK--------FINMIREEGLRPT------IPEDCPPR---LRNVIELCWSGDPKK 273
Query: 805 RPLMRYILKAL 815
RP YI+K L
Sbjct: 274 RPHFSYIVKEL 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVMEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 39/251 (15%)
Query: 572 KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
K + + E+ S ++H +V L G N +V +++P GDL L D
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLL------DKA 116
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+ W +L++ + A G+ Y+ ++ P VHRD+++ +I L L + VCA+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS-----LDENAPVCAKV 170
Query: 692 GDAHQSR-----ITRLLRLPQ--SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA 744
D S+ ++ LL Q + E + + T D Y F +L ++TG+
Sbjct: 171 ADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 745 SSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTR 804
S ++K +I++ +E + I ED + V C + P +
Sbjct: 231 YSYGKIK--------FINMIREEGLRPT------IPEDCPPR---LRNVIELCWSGDPKK 273
Query: 805 RPLMRYILKAL 815
RP YI+K L
Sbjct: 274 RPHFSYIVKEL 284
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
++V +YM G L L + L L + +A A G++Y+ + +VHR
Sbjct: 87 IYIVTEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVHR 138
Query: 665 DVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCP- 722
D++A++IL+ + ++ + RL+ + ++ QG+ + T P
Sbjct: 139 DLRAANILVGENLVCKVADFG-------------LARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 723 ----------YDVYCFGKVLLELVT 737
DV+ FG +L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G V +K + ++ +A+L E + + H +LV L + +E
Sbjct: 23 GQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VVTKEEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L + L L + + AEG++Y+ + ++HR
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NYIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGS 716
D++A+++L+ + ++ +E A+ G + T P++ G
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFG---- 185
Query: 717 LTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEILEQ 756
T +V+ FG +L E+VT GK+ ++A V L Q
Sbjct: 186 -CFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 64/304 (21%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ L L+ + T+ +++ L + IA A G+ Y
Sbjct: 84 LFMGYSTK--PQLAIVTQWCEGSSLYHHLH-ASETKFEMKKL-----IDIARQTARGMDY 135
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQG 712
LH + +HRD+++++I L + V++G G +SR + + Q S
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDF------GLATEKSRWSGSHQFEQLS--- 183
Query: 713 SSGSLTATCPY--------------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
GS+ P DVY FG VL EL+TG+ L
Sbjct: 184 --GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ------------------L 223
Query: 759 PYISIYDKELVTKIVD-PSLIIDEDLLEEVWA-----MAIVARSCLNPKPTRRPLMRYIL 812
PY +I +++ + ++V SL D L +V + M + CL K RP IL
Sbjct: 224 PYSNINNRDQIIEMVGRGSLSPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
Query: 813 KALE 816
+E
Sbjct: 281 AEIE 284
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 117/301 (38%), Gaps = 59/301 (19%)
Query: 535 DFSDANLI---KNGHSGDLFRGILEGG--IPVVIKRIDLQSVKTEAYLLELDFFSKVSHA 589
DF N + HSG+L++G +G + V+K D + K+ + E SH
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 590 RLVPLLGHCMEREN-EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
++P+LG C L+ + P G L + L+ TN +D +K A+ A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-----VVDQSQAVKFALDXAR 122
Query: 649 GLSYLHHECTLPFVHRD-VQASSILLDDKFEVRLG---------SLSEVCAQGGDAHQSR 698
G ++LH P + R + + S+ +D+ R+ S A A ++
Sbjct: 123 GXAFLH--TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEA- 179
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEILEQ 756
L + P+ + + S+ D + F +L ELVT ++ + S+ ++ K LE
Sbjct: 180 ---LQKKPEDTNRRSA---------DXWSFAVLLWELVTREVPFADLSNXEIGXKVALEG 227
Query: 757 TLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
P I V+K+ + C N P +RP I+ LE
Sbjct: 228 LRPTIPPGISPHVSKL---------------------XKICXNEDPAKRPKFDXIVPILE 266
Query: 817 N 817
Sbjct: 267 K 267
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 72/313 (23%), Positives = 124/313 (39%), Gaps = 74/313 (23%)
Query: 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
DF + LI +G G +F+ G VI+R+ + K E E+ +K+ H +V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER---EVKALAKLDHVNIVH 69
Query: 594 LLGHCMERENEKFLVYKYMP---NGDLSSSLYRKTNTEDDLQS----------------- 633
G C + + Y P + L SS Y N+++ +S
Sbjct: 70 YNG-CWDG-------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 634 -----------LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682
LD + L++ +G+ Y+H + +HRD++ S+I L D +V++G
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIG 178
Query: 683 SLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
V + D ++R LR S EQ SS D+Y G +L EL+
Sbjct: 179 DFGLVTSLKNDGKRTRSKGTLRY-MSPEQISSQDYGKEV--DLYALGLILAELL------ 229
Query: 743 SASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKP 802
V + +T + + +++ I D ++ LL+++ L+ KP
Sbjct: 230 ------HVCDTAFETSKFFTDLRDGIISDIFDKK---EKTLLQKL----------LSKKP 270
Query: 803 TRRPLMRYILKAL 815
RP IL+ L
Sbjct: 271 EDRPNTSEILRTL 283
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 535 DFSDANLIKNGHSGDLFRG-ILEGGIPV--VIKRIDLQSVKTEA--YLLELDFFSKVSHA 589
D ++I G+ G + + I + G+ + IKR+ + K + + EL+ K+ H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 590 -RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITR 639
++ LLG C E +L +Y P+G+L L + E D +L
Sbjct: 76 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
L A A G+ YL + F+HRD+ A +IL+ + + ++ ++G + + +
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG--LSRGQEVYVKKT 189
Query: 700 TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLP 759
L + + + + S+ T DV+ +G +L E+V+ +G + P
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVS--LGGT---------------P 231
Query: 760 YISIYDKELVTKI-----VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKA 814
Y + EL K+ ++ L D+++ + + R C KP RP IL +
Sbjct: 232 YCGMTCAELYEKLPQGYRLEKPLNCDDEVYD-------LMRQCWREKPYERPSFAQILVS 284
Query: 815 LENPLK 820
L L+
Sbjct: 285 LNRMLE 290
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 130 VHRDLAARNVLVSE 143
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 535 DFSDANLIKNGHSGDLFRG-ILEGGIPV--VIKRIDLQSVKTEA--YLLELDFFSKVSHA 589
D ++I G+ G + + I + G+ + IKR+ + K + + EL+ K+ H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 590 -RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITR 639
++ LLG C E +L +Y P+G+L L + E D +L
Sbjct: 86 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
L A A G+ YL + F+HRD+ A +IL+ + + ++ ++G + + +
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG--LSRGQEVYVKKT 199
Query: 700 TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLP 759
L + + + + S+ T DV+ +G +L E+V+ +G + P
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVS--LGGT---------------P 241
Query: 760 YISIYDKELVTKI-----VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKA 814
Y + EL K+ ++ L D+++ + + R C KP RP IL +
Sbjct: 242 YCGMTCAELYEKLPQGYRLEKPLNCDDEVYD-------LMRQCWREKPYERPSFAQILVS 294
Query: 815 LENPLK 820
L L+
Sbjct: 295 LNRMLE 300
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + +V ++ L L+ + T+ +++ L + IA A G+ Y
Sbjct: 84 LFMGYSTA--PQLAIVTQWCEGSSLYHHLH-ASETKFEMKKL-----IDIARQTARGMDY 135
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQG 712
LH + +HRD+++++I L + V++G G +SR + + Q S
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDF------GLATEKSRWSGSHQFEQLS--- 183
Query: 713 SSGSLTATCPY--------------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
GS+ P DVY FG VL EL+TG+ L
Sbjct: 184 --GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ------------------L 223
Query: 759 PYISIYDKELVTKIVD-PSLIIDEDLLEEVWA-----MAIVARSCLNPKPTRRPLMRYIL 812
PY +I +++ + ++V SL D L +V + M + CL K RP IL
Sbjct: 224 PYSNINNRDQIIEMVGRGSLSPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
Query: 813 KALE 816
+E
Sbjct: 281 AEIE 284
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 139 VHRDLAARNVLVSE 152
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 124 VHRDLAARNVLVSE 137
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 533 TGDFSDANLIKNGHSGDLFRG-ILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR- 590
G F L+ NG G +++G ++ G IK +D+ + E E++ K SH R
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82
Query: 591 LVPLLGHCMER-----ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIG 645
+ G +++ +++ +LV ++ G ++ + NT+ + +WI + I
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---KNTKGNTLKEEWIAYICREI- 138
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
GLS+LH +HRD++ ++LL + EV+L
Sbjct: 139 -LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 311 VHRDLAARNVLVSE 324
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 540 NLIKNGHSGDLFRG--------ILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
+I GH G ++ G ++ I + + ++Q V EA+L E ++H +
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNHPNV 84
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLY--RKTNTEDDLQSLDWITRLKIAIGAAEG 649
+ L+G + E ++ YM +GDL + ++ T DL S + A G
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF--------GLQVARG 136
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQSRITRLLRLP 706
+ YL + FVHRD+ A + +LD+ F V++ G ++ + + + + R RLP
Sbjct: 137 MEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR--EYYSVQQHRHARLP 191
Query: 707 -QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ + S + T DV+ FG +L EL+T
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 37/173 (21%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFL--VYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E+D + H ++ G C E + EK L V +Y+P G L L R S+
Sbjct: 66 EIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPR--------HSIGL 116
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR++ A ++LLD+ V++G L++ +G +
Sbjct: 117 AQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Query: 695 HQSRITRLLRLPQSSEQGSSGSL--TATC--------PYDVYCFGKVLLELVT 737
++ R E G S C DV+ FG L EL+T
Sbjct: 174 YRVR-----------EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 535 DFSDANLIKNGHSGDLFRG-ILEGGIPV--VIKRIDLQSVKTEA--YLLELDFFSKVSHA 589
D ++I G+ G + + I + G+ + IKR+ + K + + EL+ K+ H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 590 -RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITR 639
++ LLG C E +L +Y P+G+L L + E D +L
Sbjct: 83 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
L A A G+ YL + F+HR++ A +IL+ + + ++ ++G + + +
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFG--LSRGQEVYVKKT 196
Query: 700 TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLP 759
L + + + + S+ T DV+ +G +L E+V+ +G + P
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVS--LGGT---------------P 238
Query: 760 YISIYDKELVTKI-----VDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKA 814
Y + EL K+ ++ L D+++ + + R C KP RP IL +
Sbjct: 239 YCGMTCAELYEKLPQGYRLEKPLNCDDEVYD-------LMRQCWREKPYERPSFAQILVS 291
Query: 815 LENPLK 820
L L+
Sbjct: 292 LNRMLE 297
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 37/173 (21%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFL--VYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E+D + H ++ G C E + EK L V +Y+P G L L R S+
Sbjct: 66 EIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPR--------HSIGL 116
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR++ A ++LLD+ V++G L++ +G +
Sbjct: 117 AQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Query: 695 HQSRITRLLRLPQSSEQGSSGSL--TATC--------PYDVYCFGKVLLELVT 737
++ R E G S C DV+ FG L EL+T
Sbjct: 174 YRVR-----------EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 118
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 119 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 169
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 170 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 117
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 118 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 168
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 169 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 150
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 151 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 201
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 202 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 120 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 171 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 138 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 189 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 138 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 189 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 124 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 175 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 120 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 171 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 127 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 178 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 122
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 123 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 125 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 176 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 126 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 177 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 218
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 540 NLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I +G SG++ G L + +PV IK + + + +L E + H ++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L G + R +V +YM NG L + L T D ++ + + +GA G+ YL
Sbjct: 115 LEG-VVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGMLRGVGA--GMRYL 167
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSEQ 711
L +VHRD+ A ++L+D ++ LS V DA + + + ++ +
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 712 GSSGSLTATCPYDVYCFGKVLLELVT 737
+ T + DV+ FG V+ E++
Sbjct: 225 AIAFR-TFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 540 NLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I +G SG++ G L + +PV IK + + + +L E + H ++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L G + R +V +YM NG L + L T D ++ + + +GA G+ YL
Sbjct: 115 LEG-VVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGMLRGVGA--GMRYL 167
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSSEQ 711
L +VHRD+ A ++L+D ++ LS V DA + + + ++ +
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 712 GSSGSLTATCPYDVYCFGKVLLELVT 737
+ T + DV+ FG V+ E++
Sbjct: 225 AIAFR-TFSSASDVWSFGVVMWEVLA 249
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 120 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE- 169
Query: 695 HQSRITRLLRLPQSSEQ----GSSGSLTA---TCPYDVYCFGKVLLELVT 737
++ + E + SLT + DV+ FG VL EL T
Sbjct: 170 -------FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 544 NGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERE 602
G G +++ I E G V IK++ ++S + + E+ + +V G +
Sbjct: 39 EGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYF-KN 96
Query: 603 NEKFLVYKYMPNGDLSS--SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP 660
+ ++V +Y G +S L KT TED++ + I +GL YLH +
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--------ILQSTLKGLEYLHF---MR 145
Query: 661 FVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTAT 720
+HRD++A +ILL+ + +L V Q D R ++ P +
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFG-VAGQLTDXMAKR-NXVIGTPFWMAPEVIQEIGYN 203
Query: 721 CPYDVYCFGKVLLELVTGK 739
C D++ G +E+ GK
Sbjct: 204 CVADIWSLGITAIEMAEGK 222
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + FVHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGFVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 536 FSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQ----SVKTEAYLLELDFFSKVSHA 589
FSD I +G G ++ R + + V IK++ + K + + E+ F K+ H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 590 RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
+ G C RE+ +LV +Y G S L E + L + + GA +G
Sbjct: 115 NTIQYRG-CYLREHTAWLVMEYCL-GSASDLL------EVHKKPLQEVEIAAVTHGALQG 166
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L+YLH + +HRDV+A +ILL + V+LG
Sbjct: 167 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 198
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 21/166 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 120
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HR++ +IL++++ V++G L++V Q +
Sbjct: 121 TSQI------CKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEY 171
Query: 695 HQSRI---TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ + + + S S S+ + DV+ FG VL EL T
Sbjct: 172 YKVKEPGESPIFWYAPESLTESKFSVAS----DVWSFGVVLYELFT 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERE-NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E++ + H +V G C E N L+ +++P+G L L + N ++
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN------KINLK 126
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+LK A+ +G+ YL + +VHRD+ A ++L++ + +V++G
Sbjct: 127 QQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDF 170
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 58/298 (19%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 137
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLR 704
A+G++YL+ + FVHRD+ A + ++ F V++G A+ + + L
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGL- 193
Query: 705 LP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYI 761
LP + E G T + D++ FG VL E+ + + EQ PY
Sbjct: 194 LPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITS---------------LAEQ--PYQ 234
Query: 762 SIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPL 819
+ +++++ ++D + D E + + R C P RP I+ L++ L
Sbjct: 235 GLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERE-NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E++ + H +V G C E N L+ +++P+G L L + N ++
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN------KINLK 114
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+LK A+ +G+ YL + +VHRD+ A ++L++ + +V++G
Sbjct: 115 QQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDF 158
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L D ++ L +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 123 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 66/302 (21%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYR-KTNTEDD-------LQSLDWITRLKIAIG 645
LLG + + +V + M +GDL S L + E++ LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAE 138
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQS 697
A+G++YL+ + FVHRD+ A + ++ F V++G ++ +GG +
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG---KG 192
Query: 698 RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQT 757
+ P+S + G T D++ FG VL E+ + + EQ
Sbjct: 193 LLPVRWMAPESLKDG-----VFTTSSDMWSFGVVLWEITS---------------LAEQ- 231
Query: 758 LPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
PY + +++++ ++D + D E + + R C P RP I+ L++
Sbjct: 232 -PYQGLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
Query: 818 PL 819
L
Sbjct: 289 DL 290
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK++H +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 213
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 214 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 66/302 (21%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 29 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYR-KTNTEDD-------LQSLDWITRLKIAIG 645
LLG + + +V + M +GDL S L + E++ LQ + +++A
Sbjct: 82 LLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAE 135
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQS 697
A+G++YL+ + FVHRD+ A + ++ F V++G ++ +GG +
Sbjct: 136 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG---KG 189
Query: 698 RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQT 757
+ P+S + G T D++ FG VL E+ + + EQ
Sbjct: 190 LLPVRWMAPESLKDG-----VFTTSSDMWSFGVVLWEITS---------------LAEQ- 228
Query: 758 LPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
PY + +++++ ++D + D E + + R C P RP I+ L++
Sbjct: 229 -PYQGLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
Query: 818 PL 819
L
Sbjct: 286 DL 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + +VHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 66/302 (21%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYR-KTNTEDD-------LQSLDWITRLKIAIG 645
LLG + + +V + M +GDL S L + E++ LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAE 138
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQS 697
A+G++YL+ + FVHRD+ A + ++ F V++G ++ +GG +
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG---KG 192
Query: 698 RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQT 757
+ P+S + G T D++ FG VL E+ + + EQ
Sbjct: 193 LLPVRWMAPESLKDG-----VFTTSSDMWSFGVVLWEITS---------------LAEQ- 231
Query: 758 LPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
PY + +++++ ++D + D E + + R C P RP I+ L++
Sbjct: 232 -PYQGLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
Query: 818 PL 819
L
Sbjct: 289 DL 290
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK++H +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 113 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 227
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 228 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 113 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 227
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 228 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +++P G L L + D ++ L +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+++ +G+ YL T ++HRD+ +IL++++ V++G D
Sbjct: 123 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 697 SRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++ P + E + + DV+ FG VL EL T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFT 215
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 214 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 90 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 204
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 205 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 250
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 536 FSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQ----SVKTEAYLLELDFFSKVSHA 589
FSD I +G G ++ R + + V IK++ + K + + E+ F K+ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 590 RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
+ G C RE+ +LV +Y G S L E + L + + GA +G
Sbjct: 76 NTIQYRG-CYLREHTAWLVMEYCL-GSASDLL------EVHKKPLQEVEIAAVTHGALQG 127
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L+YLH + +HRDV+A +ILL + V+LG
Sbjct: 128 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 159
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 113 CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 227
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 228 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 98 CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 212
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 213 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 98 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 212
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 213 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 213
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 214 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKF-LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E+D + H ++ G C + LV +Y+P G L L R S+
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR--------HSIGLA 134
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAH 695
L A EG++YLH + ++HRD+ A ++LLD+ V++G L++ +G + +
Sbjct: 135 QLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 696 QSR 698
+ R
Sbjct: 192 RVR 194
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 22/221 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 85 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 142
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 143 -----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 700 TRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
TR ++P S E + T+ DV+ +G VL E+++
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLWEVMS 233
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 130/303 (42%), Gaps = 68/303 (22%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 137
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQ 696
A+G++YL+ + FVHRD+ A + ++ F V++G ++ +GG +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG---K 191
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQ 756
+ P+S + G T D++ FG VL E+ + + EQ
Sbjct: 192 GLLPVRWMAPESLKDG-----VFTTSSDMWSFGVVLWEITS---------------LAEQ 231
Query: 757 TLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
PY + +++++ ++D + D E + + R C P RP I+ L+
Sbjct: 232 --PYQGLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Query: 817 NPL 819
+ L
Sbjct: 288 DDL 290
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 22/221 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 125
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 126 -----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 700 TRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
TR ++P S E + T+ DV+ +G VL E+++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLWEVMS 216
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 105 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 219
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 220 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 265
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 115 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 229
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 230 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 275
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 130/303 (42%), Gaps = 68/303 (22%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 31 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 84 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 136
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL--------SEVCAQGGDAHQ 696
A+G++YL+ + FVHRD+ A + ++ F V++G ++ +GG +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG---K 190
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQ 756
+ P+S + G T D++ FG VL E+ + + EQ
Sbjct: 191 GLLPVRWMAPESLKDG-----VFTTSSDMWSFGVVLWEITS---------------LAEQ 230
Query: 757 TLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
PY + +++++ ++D + D E + + R C P RP I+ L+
Sbjct: 231 --PYQGLSNEQVLKFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
Query: 817 NPL 819
+ L
Sbjct: 287 DDL 289
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + +VHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + +VHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + +VHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + +VHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 139 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 254 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKF--LVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C E + EK LV +Y+P G L L R +
Sbjct: 60 EIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPR--------HCVGL 110
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR + A ++LLD+ V++G L++ +G +
Sbjct: 111 AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 695 HQSRITRLLRLPQSSEQGSSGSL------TATCPY----DVYCFGKVLLELVT 737
++ R E G S C + DV+ FG L EL+T
Sbjct: 168 YRVR-----------EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKF--LVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C E + EK LV +Y+P G L L R +
Sbjct: 61 EIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPR--------HCVGL 111
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR + A ++LLD+ V++G L++ +G +
Sbjct: 112 AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 695 HQSRITRLLRLPQSSEQGSSGSL------TATCPY----DVYCFGKVLLELVT 737
++ R E G S C + DV+ FG L EL+T
Sbjct: 169 YRVR-----------EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 116/311 (37%), Gaps = 68/311 (21%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHAR 590
G F A L+K+ G + VIK I+ + S + E E+ + + H
Sbjct: 35 GSFGKAILVKSTEDGRQY----------VIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL-----QSLDWITRLKIAIG 645
+V E ++V Y GDL +++ N + + Q LDW ++ +A
Sbjct: 85 IVQYR-ESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQEDQILDWFVQICLA-- 137
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL 705
L ++H L HRD+++ +I L V+LG G + L R
Sbjct: 138 ----LKHVHDRKIL---HRDIKSQNIFLTKDGTVQLGDF------GIARVLNSTVELARA 184
Query: 706 PQSSEQGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQ-VKEILEQTLPY 760
+ S + PY D++ G VL EL T K A S V +I+ + P
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP 244
Query: 761 ISIY------------------DKELVTKIVDPSLI-------IDEDLLEEVWAMAIVAR 795
+S++ D+ V I++ I + L+ E + + ++
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSK 304
Query: 796 SCLNPKPTRRP 806
P P +RP
Sbjct: 305 FGSQPIPAKRP 315
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 22/221 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 36 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 95 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 152
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 153 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 700 TRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
TR ++P S E + T+ DV+ +G VL E+++
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLWEVMS 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 116 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 231 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 23/168 (13%)
Query: 578 LELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN-TEDDLQSLDW 636
+E D + V+H +V L + + E + +L+ ++ GDL + L ++ TE+D++ +
Sbjct: 79 MERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF--Y 135
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGD 693
+ L A GL +LH +L ++RD++ +ILLD++ ++L G E
Sbjct: 136 LAEL------ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK 186
Query: 694 AHQSRITRLLRLPQ-SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
A+ T P+ + QG S S D + +G ++ E++TG +
Sbjct: 187 AYSFCGTVEYMAPEVVNRQGHSHSA------DWWSYGVLMFEMLTGSL 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 559 IPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
I V IK ++ + +L E + H ++ L G + + +V +YM NG
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGS 132
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L S L RK + + + L + R G A G+ YL + +VHRD+ A +IL++
Sbjct: 133 LDSFL-RKHDAQFTVIQLVGMLR-----GIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLL 733
++ D + TR ++P S E + T+ DV+ +G VL
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLW 241
Query: 734 ELVT 737
E+++
Sbjct: 242 EVMS 245
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 530 LAATGDFSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
L DF + ++ G G + R L+ IK+I K L E+ + ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRY-YAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 588 HARLVPLLGHCMEREN------------EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
H +V +ER N F+ +Y NG +LY ++E+ Q D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENG----TLYDLIHSENLNQQRD 116
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
RL I E LSY+H + +HRD++ +I +D+ V++G + H
Sbjct: 117 EYWRLFRQI--LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDF----GLAKNVH 167
Query: 696 QSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVL 732
+S +L+L + GSS +LT+ +Y +VL
Sbjct: 168 RS--LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 542 IKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHC 598
+ G G+++RG+ G + V I S +++ E + ++ V H ++ +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKI----FSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 599 MEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
M N + +L+ Y +G L L R Q+L+ L++A+ AA GL++LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQR--------QTLEPHLALRLAVSAACGLAHLHV 123
Query: 656 EC-----TLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGD----AHQSRI-TRLL 703
E HRD ++ ++L+ + + L+ + +QG D + R+ T+
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 704 RLPQS-SEQGSSGSLTATCPYDVYCFGKVLLEL 735
P+ EQ + + D++ FG VL E+
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVP 593
+ +G G+++ G + G P+ + L V +E +L+E SK +H +V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
+G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 125 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR---LLRLP---Q 707
F+HRD+ A + LL R+ + + D +++ R LP
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF-GMARDIYRASYYRKGGCAMLPVKWM 239
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVT-GKMGISASSDAQVKEIL 754
E G T+ D + FG +L E+ + G M + S+ +V E +
Sbjct: 240 PPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 285
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 46/228 (20%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRI--DLQSVKTEAYLLELDFFSKVSHARL 591
G FS +L++ H G + +KRI Q + EA E D +H +
Sbjct: 40 GGFSYVDLVEGLHDGHFY----------ALKRILCHEQQDREEAQR-EADMHRLFNHPNI 88
Query: 592 VPLLGHCM-ER--ENEKFLVYKYMPNGDLSSSLYRKTN-----TEDDLQSLDWITRLKIA 643
+ L+ +C+ ER ++E +L+ + G L + + R + TED + L +
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI--------LWLL 140
Query: 644 IGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLGSLSEVCAQGGDAHQS--- 697
+G GL +H + + HRD++ ++ILL D+ + + LGS+++ C + Q+
Sbjct: 141 LGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 698 ------RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
R T R P+ S + DV+ G VL ++ G+
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERT--DVWSLGCVLYAMMFGE 243
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 535 DFSDANLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D I G+ G++F G L + V R L +L E + SH +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V L+G C +++ ++V + + GD + L R +++L L++ AA G+
Sbjct: 175 VRLIGVCTQKQ-PIYIVMELVQGGDFLTFL-RTEGARLRVKTL-----LQMVGDAAAGME 227
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSS 709
YL +C +HRD+ A + L+ +K +++ +S A G A + ++ +
Sbjct: 228 YLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISAS---SDAQVKEILEQTLPYISIYDK 766
E + G ++ DV+ FG +L E T +G S S+ Q +E +E+
Sbjct: 285 EALNYGRYSSES--DVWSFGILLWE--TFSLGASPYPNLSNQQTREFVEKG--------- 331
Query: 767 ELVTKIVDPSLIIDE--DLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ P L D L+E+ WA +P +RP I + L++
Sbjct: 332 ---GRLPCPELCPDAVFRLMEQCWAY----------EPGQRPSFSTIYQELQS 371
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 11/183 (6%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615
E I ++ KR ++ K E D S++ H V L C + + + + Y NG
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNG 122
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
+L + RK + D+ TR A L YLH + +HRD++ +ILL++
Sbjct: 123 ELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLNE 172
Query: 676 KFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLEL 735
+++ ++ Q+R + Q +A D++ G ++ +L
Sbjct: 173 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 232
Query: 736 VTG 738
V G
Sbjct: 233 VAG 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 535 DFSDANLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D I G+ G++F G L + V R L +L E + SH +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V L+G C +++ ++V + + GD + L R +++L L++ AA G+
Sbjct: 175 VRLIGVCTQKQ-PIYIVMELVQGGDFLTFL-RTEGARLRVKTL-----LQMVGDAAAGME 227
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGDAHQSRITRLLRLPQSS 709
YL +C +HRD+ A + L+ +K +++ +S A G A + ++ +
Sbjct: 228 YLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISAS---SDAQVKEILEQTLPYISIYDK 766
E + G ++ DV+ FG +L E T +G S S+ Q +E +E+
Sbjct: 285 EALNYGRYSSES--DVWSFGILLWE--TFSLGASPYPNLSNQQTREFVEKG--------- 331
Query: 767 ELVTKIVDPSLIIDE--DLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALEN 817
++ P L D L+E+ WA +P +RP I + L++
Sbjct: 332 ---GRLPCPELCPDAVFRLMEQCWAY----------EPGQRPSFSTIYQELQS 371
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 26/221 (11%)
Query: 528 QLLAATGDFSD--ANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVKTEAYLL- 578
QL+ + GD + AN IK G GI+ G V +K++DL+ + L
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGST---GIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN 91
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E+ H +V + + +E ++V +++ G L+ + E+ + +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLV-GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT----- 145
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + LSYLH++ +HRD+++ SILL ++L CAQ R
Sbjct: 146 ---VCLSVLRALSYLHNQGV---IHRDIKSDSILLTSDGRIKLSDFG-FCAQVSKEVPKR 198
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
L+ P L D++ G +++E++ G+
Sbjct: 199 -KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLG----------- 334
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCP-----------YDVYCFGKVLLELVTGKMGISAS 745
+ L+ Q+ +G +G+ P D + G L E++ + A
Sbjct: 335 --LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 746 SD----AQVKE-ILEQTLPY 760
+ ++K+ +LEQ + Y
Sbjct: 393 GEKVENKELKQRVLEQAVTY 412
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLG----------- 334
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCP-----------YDVYCFGKVLLELVTGKMGISAS 745
+ L+ Q+ +G +G+ P D + G L E++ + A
Sbjct: 335 --LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 746 SD----AQVKE-ILEQTLPY 760
+ ++K+ +LEQ + Y
Sbjct: 393 GEKVENKELKQRVLEQAVTY 412
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLG----------- 334
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCP-----------YDVYCFGKVLLELVTGKMGISAS 745
+ L+ Q+ +G +G+ P D + G L E++ + A
Sbjct: 335 --LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 746 SD----AQVKE-ILEQTLPY 760
+ ++K+ +LEQ + Y
Sbjct: 393 GEKVENKELKQRVLEQAVTY 412
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 45/285 (15%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + + ++ +++ +Y+ G L + D+ Q T LK + +GL Y
Sbjct: 85 KYYGSYL-KGSKLWIIMEYLGGGSALDLL--RAGPFDEFQI---ATMLKEIL---KGLDY 135
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL----LRLPQS 708
LH E +HRD++A+++LL ++ +V+L V Q D R T + P+
Sbjct: 136 LHSEKK---IHRDIKAANVLLSEQGDVKLADFG-VAGQLTDTQIKRNTFVGTPFWMAPEV 191
Query: 709 SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDKEL 768
+Q + S D++ G +EL G+ +SD +L L
Sbjct: 192 IQQSAYDSKA-----DIWSLGITAIELAKGE---PPNSDMHPMRVL------------FL 231
Query: 769 VTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
+ K P+L+ D + + I A CLN P+ RP + +LK
Sbjct: 232 IPKNNPPTLVGD---FTKSFKEFIDA--CLNKDPSFRPTAKELLK 271
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG----------- 334
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCP-----------YDVYCFGKVLLELVTGKMGISAS 745
+ L+ Q+ +G +G+ P D + G L E++ + A
Sbjct: 335 --LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 746 SD----AQVKE-ILEQTLPY 760
+ ++K+ +LEQ + Y
Sbjct: 393 GEKVENKELKQRVLEQAVTY 412
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 541 LIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPL 594
+I G G++ G L+ +PV IK ++ + +L E + H ++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
G + + +V +YM NG L + L +K + + + L + R G + G+ YL
Sbjct: 89 EG-VVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLR-----GISAGMKYL- 140
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLP-QSSEQGS 713
+ +VHRD+ A +IL++ ++ D + TR ++P + + +
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 714 SGSLTATCPYDVYCFGKVLLELVT 737
T DV+ +G V+ E+V+
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 41/156 (26%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGH--- 597
LI G G +++G L+ PV +K + + +F ++ + R VPL+ H
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVFSFANRQ--------NFINEKNIYR-VPLMEHDNI 69
Query: 598 ----------CMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
+ E LV +Y PNG L L L + DW++ ++A
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--------SLHTSDWVSSCRLAHSVT 121
Query: 648 EGLSYLHHECTLP--------FVHRDVQASSILLDD 675
GL+YLH E LP HRD+ + ++L+ +
Sbjct: 122 RGLAYLHTE--LPRGDHYKPAISHRDLNSRNVLVKN 155
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EA L E+D KVS + L E FLV+ M G+L L K +
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-- 112
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
TR KI E + LH L VHRD++ +ILLDD ++L C
Sbjct: 113 ----TR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 159
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 60/291 (20%)
Query: 548 GDLFRGILEGGIP------VVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCM 599
G +++G L G P V IK + ++ E + E +++ H +V LLG +
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG-VV 98
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKT------NTEDD------LQSLDWITRLKIAIGAA 647
++ +++ Y +GDL L ++ +T+DD L+ D++ + A
Sbjct: 99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV---HLVAQIA 155
Query: 648 EGLSYL--HHECTLPFVHRDVQASSILLDDKFEVR---LGSLSEVCAQGGDAHQSRITRL 702
G+ YL HH VH+D+ ++L+ DK V+ LG EV A D ++ L
Sbjct: 156 AGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYA--ADYYKLLGNSL 208
Query: 703 LRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYI 761
L + + E G + D++ +G VL E+ + + PY
Sbjct: 209 LPIRWMAPEAIMYGKFSIDS--DIWSYGVVLWEVFSYGLQ-----------------PYC 249
Query: 762 SIYDKELVTKIVDPSLI-IDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYI 811
++++V I + ++ +D V+A+ I C N P+RRP + I
Sbjct: 250 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMI---ECWNEFPSRRPRFKDI 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 60/291 (20%)
Query: 548 GDLFRGILEGGIP------VVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCM 599
G +++G L G P V IK + ++ E + E +++ H +V LLG +
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG-VV 81
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKT------NTEDD------LQSLDWITRLKIAIGAA 647
++ +++ Y +GDL L ++ +T+DD L+ D++ + A
Sbjct: 82 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV---HLVAQIA 138
Query: 648 EGLSYL--HHECTLPFVHRDVQASSILLDDKFEVR---LGSLSEVCAQGGDAHQSRITRL 702
G+ YL HH VH+D+ ++L+ DK V+ LG EV A D ++ L
Sbjct: 139 AGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYA--ADYYKLLGNSL 191
Query: 703 LRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYI 761
L + + E G + D++ +G VL E+ + + PY
Sbjct: 192 LPIRWMAPEAIMYGKFSIDS--DIWSYGVVLWEVFSYGLQ-----------------PYC 232
Query: 762 SIYDKELVTKIVDPSLI-IDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYI 811
++++V I + ++ +D V+A+ I C N P+RRP + I
Sbjct: 233 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMI---ECWNEFPSRRPRFKDI 280
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 64/304 (21%), Positives = 126/304 (41%), Gaps = 68/304 (22%)
Query: 545 GHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------LV 592
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +V
Sbjct: 21 GSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
LLG + + ++ + M GDL S SL + L +++A A+G
Sbjct: 77 RLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSS 709
++YL+ FVHRD+ A + ++ + F V++G +TR +
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG-------------MTRDIXETDXX 179
Query: 710 EQGSSGSLTA-------------TCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQ 756
+G G L T DV+ FG VL E+ T + EQ
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 224
Query: 757 TLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALE 816
PY + +++++ +++ L+ D ++ + + R C P RP I+ +++
Sbjct: 225 --PYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIISSIK 280
Query: 817 NPLK 820
++
Sbjct: 281 EEME 284
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 545 GHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------LV 592
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +V
Sbjct: 27 GSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
LLG + + ++ + M GDL S SL + L +++A A+G
Sbjct: 83 RLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LLR 704
++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 142 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLLP 194
Query: 705 L----PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPY 760
+ P+S + G T DV+ FG VL E+ T + EQ PY
Sbjct: 195 VRWMSPESLKDG-----VFTTYSDVWSFGVVLWEIAT---------------LAEQ--PY 232
Query: 761 ISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 233 QGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D +V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 59 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 117
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L +A L +LH +L ++RD++ +ILLD++ ++
Sbjct: 118 SKEVMFTEEDVKF--YLAELALA------LDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
L ++ H+ + + T D + FG ++ E++TG +
Sbjct: 167 LTDFG--LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EA L E+D KVS + L E FLV+ M G+L L K +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-- 125
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
TR KI E + LH L VHRD++ +ILLDD ++L C
Sbjct: 126 ----TR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 545 GHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------LV 592
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +V
Sbjct: 23 GSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
LLG + + ++ + M GDL S SL + L +++A A+G
Sbjct: 79 RLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LLR 704
++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLLP 190
Query: 705 L----PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPY 760
+ P+S + G T DV+ FG VL E+ T + EQ PY
Sbjct: 191 VRWMSPESLKDG-----VFTTYSDVWSFGVVLWEIAT---------------LAEQ--PY 228
Query: 761 ISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 229 QGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EA L E+D KVS + L E FLV+ M G+L L K +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-- 125
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
TR KI E + LH L VHRD++ +ILLDD ++L C
Sbjct: 126 ----TR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D +V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 60 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 118
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L +A L +LH +L ++RD++ +ILLD++ ++
Sbjct: 119 SKEVMFTEEDVKF--YLAELALA------LDHLH---SLGIIYRDLKPENILLDEEGHIK 167
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
L ++ H+ + + T D + FG ++ E++TG +
Sbjct: 168 LTDFG--LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D +V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 59 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 117
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L +A L +LH +L ++RD++ +ILLD++ ++
Sbjct: 118 SKEVMFTEEDVKF--YLAELALA------LDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
L ++ H+ + + T D + FG ++ E++TG +
Sbjct: 167 LTDFG--LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 65/300 (21%), Positives = 135/300 (45%), Gaps = 60/300 (20%)
Query: 545 GHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------LV 592
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +V
Sbjct: 26 GSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSL--YRKTNTEDDLQSLDWITRL-KIAIGAAEG 649
LLG + + ++ + M GDL S L R + + + ++++ ++A A+G
Sbjct: 82 RLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LLR 704
++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLLP 193
Query: 705 L----PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPY 760
+ P+S + G T DV+ FG VL E+ T + EQ PY
Sbjct: 194 VRWMSPESLKDG-----VFTTYSDVWSFGVVLWEIAT---------------LAEQ--PY 231
Query: 761 ISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 232 QGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 530 LAATGDFSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
L DF + ++ G G + R L+ IK+I K L E+ + ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRY-YAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 588 HARLVPLLGHCMEREN------------EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
H +V +ER N F+ +Y N +LY ++E+ Q D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCEN----RTLYDLIHSENLNQQRD 116
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
RL I E LSY+H + +HRD++ +I +D+ V++G + H
Sbjct: 117 EYWRLFRQI--LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDF----GLAKNVH 167
Query: 696 QSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVL 732
+S +L+L + GSS +LT+ +Y +VL
Sbjct: 168 RS--LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 22/221 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V + M NG L S L RK + + + L + R
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLR 125
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 126 -----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 700 TRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
TR ++P S E + T+ DV+ +G VL E+++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLWEVMS 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ + + +R+ +L+ ++ P G+L L +K D+ +S ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 121
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A+ L Y H +HRD++ ++L+ K E+++ G H
Sbjct: 122 EL------ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF------GWSVHAPS 166
Query: 699 ITR------LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV-K 751
+ R L LP +G T D++C G + E + G + S + +
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGK----THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
Query: 752 EILEQTL---PYISIYDKELVTKIV---DPSLIIDEDLLEEVWAMAIVARSCLNP 800
I+ L P++S K+L++K++ P + + ++E W A +R L P
Sbjct: 223 RIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA-NSRRVLPP 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ + + +R+ +L+ ++ P G+L L +K D+ +S ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 121
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A+ L Y H +HRD++ ++L+ K E+++ G H
Sbjct: 122 EL------ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF------GWSVHAPS 166
Query: 699 ITR------LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV-K 751
+ R L LP +G T D++C G + E + G + S + +
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGK----THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
Query: 752 EILEQTL---PYISIYDKELVTKIV---DPSLIIDEDLLEEVWAMAIVARSCLNP 800
I+ L P++S K+L++K++ P + + ++E W A +R L P
Sbjct: 223 RIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA-NSRRVLPP 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 126/305 (41%), Gaps = 68/305 (22%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 29 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 85 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQS 708
G++YL+ FVHRD+ A + ++ + F V++G +TR +
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG-------------MTRDIXETDX 187
Query: 709 SEQGSSGSLTA-------------TCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILE 755
+G G L T DV+ FG VL E+ T + E
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE 232
Query: 756 QTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKAL 815
Q PY + +++++ +++ L+ D ++ + + R C P RP I+ ++
Sbjct: 233 Q--PYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSI 288
Query: 816 ENPLK 820
+ ++
Sbjct: 289 KEEME 293
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ C +
Sbjct: 117 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL 167
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 211
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 212 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 22/221 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V + M NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP---QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
TR ++P S E + T+ DV+ +G VL E+++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLWEVMS 245
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 310 VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369
+S L I+ L NGF P +V + +L+++D+ NN LP S N S LN+ +
Sbjct: 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQK 593
Query: 370 NMF-----------YGGLTPVLGRFRLVDLSGN---YFEGRVPEYVHSNASSLDSNCLQN 415
N+ + LT + RF D + +F + E H+N L S+ L N
Sbjct: 594 NLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN 652
Query: 416 VP 417
P
Sbjct: 653 TP 654
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ + + +R+ +L+ ++ P G+L L +K D+ +S ++
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 122
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A+ L Y H +HRD++ ++L+ K E+++ G H
Sbjct: 123 EL------ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF------GWSVHAPS 167
Query: 699 ITR------LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV-K 751
+ R L LP +G T D++C G + E + G + S + +
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGK----THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 223
Query: 752 EILEQTL---PYISIYDKELVTKIV---DPSLIIDEDLLEEVWAMAIVARSCLNP 800
I+ L P++S K+L++K++ P + + ++E W A +R L P
Sbjct: 224 RIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA-NSRRVLPP 277
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 310 VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369
+S L I+ L NGF P +V + +L+++D+ NN LP S N S LN+ +
Sbjct: 545 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQK 603
Query: 370 NMF-----------YGGLTPVLGRFRLVDLSGN---YFEGRVPEYVHSNASSLDSNCLQN 415
N+ + LT + RF D + +F + E H+N L S+ L N
Sbjct: 604 NLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN 662
Query: 416 VP 417
P
Sbjct: 663 TP 664
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 60/301 (19%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 29 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 85 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LL 703
G++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLL 196
Query: 704 RL----PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLP 759
+ P+S + G T DV+ FG VL E+ T + EQ P
Sbjct: 197 PVRWMSPESLKDG-----VFTTYSDVWSFGVVLWEIAT---------------LAEQ--P 234
Query: 760 YISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPL 819
Y + +++++ +++ L+ D ++ + + R C P RP I+ +++ +
Sbjct: 235 YQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEM 292
Query: 820 K 820
+
Sbjct: 293 E 293
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 14/135 (10%)
Query: 617 LSSSLYRKTNTEDDLQS--LDWITRLKIAIGAAEGLSYLHHEC------TLPFV-HRDVQ 667
L ++ + K + D L++ + W IA A GL+YLH + P + HRD++
Sbjct: 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158
Query: 668 ASSILLDDKFEVRLGSLS-----EVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCP 722
+ ++LL + + E GD H TR P+ E + A
Sbjct: 159 SKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR 218
Query: 723 YDVYCFGKVLLELVT 737
D+Y G VL EL +
Sbjct: 219 IDMYAMGLVLWELAS 233
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 310 VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369
+S L I+ L NGF P +V + +L+++D+ NN LP S N S LN+ +
Sbjct: 540 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQK 598
Query: 370 NMF-----------YGGLTPVLGRFRLVDLSGN---YFEGRVPEYVHSNASSLDSNCLQN 415
N+ + LT + RF D + +F + E H+N L S+ L N
Sbjct: 599 NLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN 657
Query: 416 VP 417
P
Sbjct: 658 TP 659
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 130/300 (43%), Gaps = 60/300 (20%)
Query: 545 GHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------LV 592
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +V
Sbjct: 23 GSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
LLG + + ++ + M GDL S SL + L +++A A+G
Sbjct: 79 RLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LLR 704
++YL+ FVHRD+ A + + + F V++G D +++ R LL
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLLP 190
Query: 705 L----PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPY 760
+ P+S + G T DV+ FG VL E+ T + EQ PY
Sbjct: 191 VRWMSPESLKDG-----VFTTYSDVWSFGVVLWEIAT---------------LAEQ--PY 228
Query: 761 ISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 229 QGLSNEQVLRFVMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 532 ATGDFSDANLIKNGHSGDLF-RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR 590
TG F +LI++ H+G + +L+ I V +K++ + E +L S V+H
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQV--EHTNDERLML-----SIVTHPF 67
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
++ + G + + F++ Y+ G+L S L + + + A L
Sbjct: 68 IIRMWG-TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-------YAAEVCLAL 119
Query: 651 SYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSE 710
YLH + ++RD++ +ILLD +++ G + +T L +
Sbjct: 120 EYLHSK---DIIYRDLKPENILLDKNGHIKITDF------GFAKYVPDVTYXL---CGTP 167
Query: 711 QGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQVKE-ILEQTL---PYIS 762
+ + +T PY D + FG ++ E++ G S+ + E IL L P+ +
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN 227
Query: 763 IYDKELVTKIV 773
K+L+++++
Sbjct: 228 EDVKDLLSRLI 238
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 129/298 (43%), Gaps = 54/298 (18%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 28 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 84 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LL 703
G++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLL 195
Query: 704 RLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYIS 762
+ S E G T DV+ FG VL E+ T + EQ PY
Sbjct: 196 PVRWMSPESLKDGVFTTYS--DVWSFGVVLWEIAT---------------LAEQ--PYQG 236
Query: 763 IYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 237 LSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 54/297 (18%)
Query: 545 GHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------LV 592
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +V
Sbjct: 58 GSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
LLG + + ++ + M GDL S SL + L +++A A+G
Sbjct: 114 RLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LLR 704
++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 173 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLLP 225
Query: 705 LP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISI 763
+ S E G T DV+ FG VL E+ T + EQ PY +
Sbjct: 226 VRWMSPESLKDGVFTTYS--DVWSFGVVLWEIAT---------------LAEQ--PYQGL 266
Query: 764 YDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 267 SNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 71/304 (23%), Positives = 121/304 (39%), Gaps = 49/304 (16%)
Query: 519 NLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYL 577
+LG Y Q + F+ I G G++F+GI VV IK IDL+ + E
Sbjct: 12 DLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED 71
Query: 578 L--ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
+ E+ S+ + G + ++ + +++ +Y+ G L + LD
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLD 122
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
I +GL YLH E +HRD++A+++LL + EV+L V Q D
Sbjct: 123 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQ 178
Query: 696 QSRI----TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVK 751
R T P+ +Q + S D++ G +EL G+ S +V
Sbjct: 179 IKRNTFVGTPFWMAPEVIKQSAYDSKA-----DIWSLGITAIELARGEPPHSELHPMKVL 233
Query: 752 EILEQTLPYI--SIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMR 809
++ + P Y K L ++ +E +CLN +P+ RP +
Sbjct: 234 FLIPKNNPPTLEGNYSKPL------------KEFVE----------ACLNKEPSFRPTAK 271
Query: 810 YILK 813
+LK
Sbjct: 272 ELLK 275
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 129/298 (43%), Gaps = 54/298 (18%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 35 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 91 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LL 703
G++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 150 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLL 202
Query: 704 RLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYIS 762
+ S E G T DV+ FG VL E+ T + EQ PY
Sbjct: 203 PVRWMSPESLKDGVFTTYS--DVWSFGVVLWEIAT---------------LAEQ--PYQG 243
Query: 763 IYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 244 LSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 558 GIPVVIKRIDLQSV-KTEAYLL--ELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMP 613
G +V K +D S+ + E +L E++ ++ H +V ++R N ++V +Y
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 614 NGDLSSSLYRKTNTEDDLQS---LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670
GDL+S + + T L L +T+L +A+ S H +HRD++ ++
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV----LHRDLKPAN 146
Query: 671 ILLDDKFEVRLGSL 684
+ LD K V+LG
Sbjct: 147 VFLDGKQNVKLGDF 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G++ L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 215
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 216 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 261
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 133/298 (44%), Gaps = 54/298 (18%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 35 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSL--YRKTNTEDDLQSLDWITRL-KIAIGAAE 648
V LLG + + ++ + M GDL S L R + + + ++++ ++A A+
Sbjct: 91 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LL 703
G++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 150 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLL 202
Query: 704 RLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYIS 762
+ S E G T DV+ FG VL E+ T + EQ PY
Sbjct: 203 PVRWMSPESLKDGVFTTYS--DVWSFGVVLWEIAT---------------LAEQ--PYQG 243
Query: 763 IYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPLK 820
+ +++++ +++ L+ D ++ + + R C P RP I+ +++ ++
Sbjct: 244 LSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 60/301 (19%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 28 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 84 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR-----LL 703
G++YL+ FVHRD+ A + ++ + F V++G D +++ R LL
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF----GMTRDIYETDYYRKGGKGLL 195
Query: 704 RL----PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLP 759
+ P+S + G T DV+ FG VL E+ T + EQ P
Sbjct: 196 PVRWMSPESLKDG-----VFTTYSDVWSFGVVLWEIAT---------------LAEQ--P 233
Query: 760 YISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILKALENPL 819
Y + +++++ +++ L+ D ++ + + R C P RP I+ +++ +
Sbjct: 234 YQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIISSIKEEM 291
Query: 820 K 820
+
Sbjct: 292 E 292
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 560 PVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
P + R D Q E + + + H +V G C + + +V++YM +GDL+
Sbjct: 56 PTLAARKDFQR--------EAELLTNLQHEHIVKFYGVCGDGD-PLIMVFEYMKHGDLNK 106
Query: 620 SLYRKTNTEDDLQSLDWITR-----------LKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
L + + D + +D R L IA A G+ YL + FVHRD+
Sbjct: 107 FL--RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLAT 161
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL---LRLP-QSSEQGSSGSLTATCPYD 724
+ L+ V++G D + + R+ LP + S T D
Sbjct: 162 RNCLVGANLLVKIGDF----GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 217
Query: 725 VYCFGKVLLELVT-GKMGISASSDAQVKEILEQ 756
V+ FG +L E+ T GK S+ +V E + Q
Sbjct: 218 VWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 237
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 238 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 286
Query: 680 RLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLEL 735
+L CAQ R + + + L + PY D++ G +++E+
Sbjct: 287 KLSDFG-FCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 736 VTGK 739
V G+
Sbjct: 341 VDGE 344
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 572 KTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE-- 628
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK +
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 629 -DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+D + L+ L + A+G+++L + +HRDV A ++LL + ++G
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDF 196
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 160
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 161 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 209
Query: 680 RLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLEL 735
+L CAQ R + + + L + PY D++ G +++E+
Sbjct: 210 KLSDFG-FCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 736 VTGK 739
V G+
Sbjct: 264 VDGE 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G++ L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 171
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 215
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 216 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 261
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 117
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 118 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 166
Query: 680 RLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLEL 735
+L CAQ R + + + L + PY D++ G +++E+
Sbjct: 167 KLSDFG-FCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 736 VTGK 739
V G+
Sbjct: 221 VDGE 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 558 GIPVVIKRIDLQSV-KTEAYLL--ELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMP 613
G +V K +D S+ + E +L E++ ++ H +V ++R N ++V +Y
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 614 NGDLSSSLYRKTNTEDDLQS---LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670
GDL+S + + T L L +T+L +A+ S H +HRD++ ++
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGH----TVLHRDLKPAN 146
Query: 671 ILLDDKFEVRLGSL 684
+ LD K V+LG
Sbjct: 147 VFLDGKQNVKLGDF 160
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 558 GIPVVIKRIDLQSV-KTEAYLL--ELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMP 613
G +V K +D S+ + E +L E++ ++ H +V ++R N ++V +Y
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 614 NGDLSSSLYRKTNTEDDLQS---LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670
GDL+S + + T L L +T+L +A+ S H +HRD++ ++
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGH----TVLHRDLKPAN 146
Query: 671 ILLDDKFEVRLGSL 684
+ LD K V+LG
Sbjct: 147 VFLDGKQNVKLGDF 160
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 735 LVTG 738
LV G
Sbjct: 227 LVAG 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.1 bits (87), Expect = 0.021, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C+E + +V++YM +GDL+ L R + L +
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGD-PLIMVFEYMKHGDLNKFL-RAHGPDAVLMAEGNPP 122
Query: 634 --LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L IA A G+ YL + FVHRD+ + L+ + V++G
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDF 172
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 115
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 116 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 164
Query: 680 RLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLEL 735
+L CAQ R + + + L + PY D++ G +++E+
Sbjct: 165 KLSDFG-FCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 736 VTGK 739
V G+
Sbjct: 219 VDGE 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 572 KTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE-- 628
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 629 -DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+D + L+ L + A+G+++L + +HRDV A ++LL + ++G
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
E F + ++L G FS L + + E I ++ KR ++ K E D
Sbjct: 8 EDFKFGKILGE-GSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRERD 60
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S++ H V L + + + + Y NG+L + RK + D+ TR
Sbjct: 61 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDET-----CTRFY 113
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR 701
A L YLH + +HRD++ +ILL++ +++ ++ Q+R
Sbjct: 114 TA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 702 LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTG 738
+ Q +A D++ G ++ +LV G
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
E F + ++L G FS L + + E I ++ KR ++ K E D
Sbjct: 7 EDFKFGKILGE-GSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRERD 59
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S++ H V L + + + + Y NG+L + RK + D+ TR
Sbjct: 60 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDET-----CTRFY 112
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR 701
A L YLH + +HRD++ +ILL++ +++ ++ Q+R
Sbjct: 113 TA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 702 LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTG 738
+ Q +A D++ G ++ +LV G
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.1 bits (87), Expect = 0.023, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
E F + ++L G FS L + + E I ++ KR ++ K E D
Sbjct: 14 EDFKFGKILGE-GSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRERD 66
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S++ H V L + + + + Y NG+L + RK + D+ TR
Sbjct: 67 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDET-----CTRFY 119
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR 701
A L YLH + +HRD++ +ILL++ +++ ++ Q+R
Sbjct: 120 TA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 175
Query: 702 LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTG 738
+ Q +A D++ G ++ +LV G
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 117
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 118 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 167
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 735 LVTG 738
LV G
Sbjct: 228 LVAG 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
Query: 735 LVTG 738
LV G
Sbjct: 227 LVAG 230
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
EL + H LV L + + E + F+V + GDL L + + +++ L +I
Sbjct: 65 ELQIMQGLEHPFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FIC 122
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L +A L YL ++ +HRD++ +ILLD+ V + + + +
Sbjct: 123 ELVMA------LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173
Query: 699 I--TRLLRLPQ--SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEIL 754
+ T+ P+ SS +G+ S D + G EL+ G+ S KEI+
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
Query: 755 E----QTLPYISIYDKELVT---KIVDPS 776
+ Y S + +E+V+ K+++P+
Sbjct: 230 HTFETTVVTYPSAWSQEMVSLLKKLLEPN 258
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 119
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 120 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 169
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 229
Query: 735 LVTG 738
LV G
Sbjct: 230 LVAG 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 735 LVTG 738
LV G
Sbjct: 225 LVAG 228
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRG-ILEGGIPVVIKRI---DLQSVKTEAYLL-ELDFFSKVSH 588
+F I G +++R L G+PV +K++ DL K A + E+D +++H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
++ +E +NE +V + GDLS + + + + + T K +
Sbjct: 92 PNVIKYYASFIE-DNELNIVLELADAGDLSRMI---KHFKKQKRLIPERTVWKYFVQLCS 147
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L ++H + HRD++ +++ + V+LG L
Sbjct: 148 ALEHMHSRRVM---HRDIKPANVFITATGVVKLGDL 180
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 106
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 107 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 155
Query: 680 RLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLEL 735
+L CAQ R + + + L + PY D++ G +++E+
Sbjct: 156 KLSDFG-FCAQVSKEVPRR-----KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209
Query: 736 VTGK 739
V G+
Sbjct: 210 VDGE 213
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 735 LVTG 738
LV G
Sbjct: 227 LVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 735 LVTG 738
LV G
Sbjct: 225 LVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
E F + ++L G FS L + + E I ++ KR ++ K E D
Sbjct: 9 EDFKFGKILGE-GSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRERD 61
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S++ H V L + + + + Y NG+L + RK + D+ TR
Sbjct: 62 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDET-----CTRFY 114
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR 701
A L YLH + +HRD++ +ILL++ +++ ++ Q+R
Sbjct: 115 TA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 702 LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTG 738
+ Q +A D++ G ++ +LV G
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 117
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 118 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 167
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 735 LVTG 738
LV G
Sbjct: 228 LVAG 231
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 95 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 149
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 150 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 198
Query: 687 VCAQG---GDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK---- 739
+C +G GD + + +G + D + G ++ E++ G+
Sbjct: 199 MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSPFD 254
Query: 740 -MGISASSDAQVKEILEQTL 758
+G S + D ++ L Q +
Sbjct: 255 IVGSSDNPDQNTEDYLFQVI 274
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 11/183 (6%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615
E I ++ KR ++ K E D S++ H V L + + + + Y NG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
+L + RK + D+ TR A L YLH + +HRD++ +ILL++
Sbjct: 118 ELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLNE 167
Query: 676 KFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLEL 735
+++ ++ Q+R + Q +A D++ G ++ +L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
Query: 736 VTG 738
V G
Sbjct: 228 VAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 735 LVTG 738
LV G
Sbjct: 225 LVAG 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 15/163 (9%)
Query: 527 QQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRI-----DLQSVKTEAYLLELD 581
+Q+ DF +I G G++ L+ V +I L+ +T + E D
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
++ + L + + +N +LV Y GDL + L + + + + ++ +
Sbjct: 127 VLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
IAI + L Y VHRD++ +IL+D +RL
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADF 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
E F + ++L G FS L + + E I ++ KR ++ K E D
Sbjct: 10 EDFKFGKILGE-GSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRERD 62
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S++ H V L + + + + Y NG+L + RK + D+ TR
Sbjct: 63 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDET-----CTRFY 115
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITR 701
A L YLH + +HRD++ +ILL++ +++ ++ Q+R
Sbjct: 116 TA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 702 LLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTG 738
+ Q +A D++ G ++ +LV G
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 735 LVTG 738
LV G
Sbjct: 227 LVAG 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 21/149 (14%)
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL-- 659
E E +L+ + G L+ Y K N + W +A + GLSYLH +
Sbjct: 85 EVELWLITAFHDKGSLTD--YLKGNI------ITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 660 ------PFVHRDVQASSILLDDKFEVRLGSLS-----EVCAQGGDAHQSRITRLLRLPQS 708
HRD ++ ++LL L E GD H TR P+
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 709 SEQGSSGSLTATCPYDVYCFGKVLLELVT 737
E + A D+Y G VL ELV+
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 110
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 111 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 159
Query: 680 RLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLEL 735
+L CAQ R + + + L + PY D++ G +++E+
Sbjct: 160 KLSDFG-FCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 213
Query: 736 VTGK 739
V G+
Sbjct: 214 VDGE 217
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 735 LVTG 738
LV G
Sbjct: 225 LVAG 228
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 52 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 106
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 107 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 155
Query: 687 VCAQG 691
+C +G
Sbjct: 156 MCKEG 160
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 113
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 114 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 163
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
Query: 735 LVTG 738
LV G
Sbjct: 224 LVAG 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 48 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 102
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 103 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 151
Query: 687 VCAQG 691
+C +G
Sbjct: 152 MCKEG 156
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 63 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 117
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 118 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 166
Query: 687 VCAQG 691
+C +G
Sbjct: 167 MCKEG 171
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ + L + + EN +LV Y GDL + L + + + + +I + +AI +
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLP-- 706
L Y VHRD++ ++LLD +RL C + D + + + P
Sbjct: 209 QLHY---------VHRDIKPDNVLLDVNGHIRLADFGS-CLKMNDDGTVQSSVAVGTPDY 258
Query: 707 ------QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASS 746
Q+ E G G C D + G + E++ G+ A S
Sbjct: 259 ISPEILQAMEDG-MGKYGPEC--DWWSLGVCMYEMLYGETPFYAES 301
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 37/253 (14%)
Query: 562 VIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V+ + L+ E L E++ S + H ++ L G+ + +L+ +Y P G +
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYRE 124
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L +K + D+ ++ +IT L A LSY H + +HRD++ ++LL E++
Sbjct: 125 L-QKLSKFDEQRTATYITEL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELK 174
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
+ + L LP +G D++ G + E + GK
Sbjct: 175 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKP 230
Query: 741 GISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNP 800
A++ Y Y + + P + + A +++R L
Sbjct: 231 PFEANT-------------YQETYKRISRVEFTFPDFVTE-------GARDLISR-LLKH 269
Query: 801 KPTRRPLMRYILK 813
P++RP++R +L+
Sbjct: 270 NPSQRPMLREVLE 282
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 113
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 114 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 163
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A D++ G ++ +
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
Query: 735 LVTG 738
LV G
Sbjct: 224 LVAG 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 49/287 (17%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + ++ + +++ +Y+ G L + LD I +GL Y
Sbjct: 69 KYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLLRLPQS 708
LH E +HRD++A+++LL + EV+L V Q D R T P+
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQIKRNXFVGTPFWMAPEV 175
Query: 709 SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYI--SIYDK 766
+Q + S D++ G +EL G+ S +V ++ + P Y K
Sbjct: 176 IKQSAYDSKA-----DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 230
Query: 767 ELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
L ++ +E +CLN +P+ RP + +LK
Sbjct: 231 PL------------KEFVE----------ACLNKEPSFRPTAKELLK 255
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ + L + + EN +LV Y GDL + L + + + + +I + +AI +
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLP-- 706
L Y VHRD++ ++LLD +RL C + D + + + P
Sbjct: 193 QLHY---------VHRDIKPDNVLLDVNGHIRLADFGS-CLKMNDDGTVQSSVAVGTPDY 242
Query: 707 ------QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASS 746
Q+ E G G C D + G + E++ G+ A S
Sbjct: 243 ISPEILQAMEDG-MGKYGPEC--DWWSLGVCMYEMLYGETPFYAES 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 49/287 (17%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + ++ + +++ +Y+ G L + LD I +GL Y
Sbjct: 69 KYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLLRLPQS 708
LH E +HRD++A+++LL + EV+L V Q D R T P+
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQIKRNTFVGTPFWMAPEV 175
Query: 709 SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYI--SIYDK 766
+Q + S D++ G +EL G+ S +V ++ + P Y K
Sbjct: 176 IKQSAYDSKA-----DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 230
Query: 767 ELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
L ++ +E +CLN +P+ RP + +LK
Sbjct: 231 PL------------KEFVE----------ACLNKEPSFRPTAKELLK 255
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 43/199 (21%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KI + + L++L L +HRD++ S+ILLD ++L G L + A+ DA
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 695 HQSRITRLLRL-PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEI 753
R+ P +S QG DV+ G L EL TG+
Sbjct: 187 GCRPYMAPERIDPSASRQGYD------VRSDVWSLGITLYELATGR-------------- 226
Query: 754 LEQTLPYI---SIYDKELVTKIV--DPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLM 808
PY S++D+ +T++V DP + + + E + CL ++RP
Sbjct: 227 ----FPYPKWNSVFDQ--LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY 280
Query: 809 RYILKALENPLKVVREENS 827
+ +LK +P ++ EE +
Sbjct: 281 KELLK---HPFILMYEERA 296
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 522 ESFTYQQLLAATGDFSDANLIK--NGH-SGDLFRGILEGGIPVVIKRIDLQSVKTEAYLL 578
E+F ++L TG + L++ +GH +G L+ + +V K + +TE +L
Sbjct: 54 ENFELLKVLG-TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 579 ELDFFSKVSHARLVPLL---GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
E H R P L + + E + L+ Y+ G+L + L ++
Sbjct: 113 E--------HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--------- 155
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGG 692
T ++ I E + L H L ++RD++ +ILLD V L G E A
Sbjct: 156 -FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 214
Query: 693 D-AHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA----SSD 747
+ A+ T P G SG A D + G ++ EL+TG + +S
Sbjct: 215 ERAYDFCGTIEYMAPDIVRGGDSGHDKAV---DWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 748 AQV-KEILEQTLPY---ISIYDKELVTKIV--DPS 776
A++ + IL+ PY +S K+L+ +++ DP
Sbjct: 272 AEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPK 306
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.0 bits (84), Expect = 0.044, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 49/287 (17%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + ++ + +++ +Y+ G L + LD I +GL Y
Sbjct: 84 KYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDY 134
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLLRLPQS 708
LH E +HRD++A+++LL + EV+L V Q D R T P+
Sbjct: 135 LHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQIKRNXFVGTPFWMAPEV 190
Query: 709 SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYI--SIYDK 766
+Q + S D++ G +EL G+ S +V ++ + P Y K
Sbjct: 191 IKQSAYDSKA-----DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 245
Query: 767 ELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
L ++ +E +CLN +P+ RP + +LK
Sbjct: 246 PL------------KEFVE----------ACLNKEPSFRPTAKELLK 270
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 118 KVSIAVLRGLAYLREKHQI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 174
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEIL 754
TR P+ QG+ S+ + D++ G L+EL G+ I +++ I
Sbjct: 175 GTRSYMAPERL-QGTHYSVQS----DIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 164
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI---SASSDAQVKEILE 755
TR P+ QG+ S+ + D++ G L+E+ G+ I A D++ +
Sbjct: 165 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
Query: 756 QTLPYI 761
+ L YI
Sbjct: 220 ELLDYI 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 606 FLVYKYMPNGDLSSSLYRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
FLV+ M G+L L K +E + +S I E +S+LH VHR
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETRS--------IMRSLLEAVSFLHANN---IVHR 224
Query: 665 DVQASSILLDDKFEVRLGSLSEVC 688
D++ +ILLDD ++RL C
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSC 248
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 107 HLM-GADLNNIVKXQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 153
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCF 728
S++ +++ E+++ + TR R P+ + T D++
Sbjct: 154 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV----DIWSV 209
Query: 729 GKVLLELVTGK 739
G ++ EL+TG+
Sbjct: 210 GCIMAELLTGR 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 37/253 (14%)
Query: 562 VIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V+ + L+ E L E++ S + H ++ L G+ + +L+ +Y P G +
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYRE 124
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L +K + D+ ++ +IT L A LSY H + +HRD++ ++LL E++
Sbjct: 125 L-QKLSKFDEQRTATYITEL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELK 174
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
+ L LP +G D++ G + E + GK
Sbjct: 175 IADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKP 230
Query: 741 GISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNP 800
A++ Y Y + + P + + A +++R L
Sbjct: 231 PFEANT-------------YQETYKRISRVEFTFPDFVTE-------GARDLISR-LLKH 269
Query: 801 KPTRRPLMRYILK 813
P++RP++R +L+
Sbjct: 270 NPSQRPMLREVLE 282
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 576 YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
+L E + H ++ L G + + ++ +YM NG L + L RK + + L
Sbjct: 56 FLSEASIMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLV 113
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
+ R G G+ YL + +VHRD+ A +IL++ ++ D
Sbjct: 114 GMLR-----GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 165
Query: 696 QSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ TR ++P + + + T DV+ +G V+ E+++
Sbjct: 166 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 576 YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
+L E + H ++ L G + + ++ +YM NG L + L RK + + L
Sbjct: 62 FLSEASIMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLV 119
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
+ R G G+ YL + +VHRD+ A +IL++ ++ D
Sbjct: 120 GMLR-----GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 171
Query: 696 QSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
+ TR ++P + + + T DV+ +G V+ E+++
Sbjct: 172 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 210
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 211 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 256
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 27/219 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F + L+++ + ++ L + IKR D A+ E +++ V
Sbjct: 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSD------SAFFWEERDIMAFANSPWVV 132
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + + + ++V +YMP GDL + + E W + A L +
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAEVVLA--LDAI 184
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQS----- 708
H ++ F+HRDV+ ++LLD ++L C + R + P
Sbjct: 185 H---SMGFIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 709 -SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASS 746
QG G C D + G L E++ G A S
Sbjct: 241 LKSQGGDGYYGREC--DWWSVGVFLYEMLVGDTPFYADS 277
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 117
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ + +
Sbjct: 118 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 168
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 212
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 213 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 258
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GCLLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ +++ ++ Q+R + Q +A+ D++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQ 226
Query: 735 LVTG 738
LV G
Sbjct: 227 LVAG 230
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 4/203 (1%)
Query: 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTG 204
Q + L IS V S + NLT L+L N L G
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 205 NI-PTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXX 263
+ PT+F L +L +L + L P L+ LQYL + +N+L ++P
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNL-QALPDNTFRDLG 152
Query: 264 XXXXXXXXXXXXGSVPSE-LRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNG 322
SVP RGL SL + ++ N ++ + + F + +L + L N
Sbjct: 153 NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVA-RVHPHAFRDLGRLMTLYLFANN 211
Query: 323 FTGPPPDVLWSMPQLRLLDISRN 345
+ P +VL + L+ L ++ N
Sbjct: 212 LSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ + +
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 169
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 213
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 214 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 259
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 27/202 (13%)
Query: 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTG 204
+ LDL+S +S + + LT L LYL+DN L T+P
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 205 NIPTS-FGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXX 263
+P F L NL+ L + N L P +L+KL YL++ N L S+P
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL-QSLPK------- 150
Query: 264 XXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGF 323
L SL++ + NN L + F +++L+ + L N
Sbjct: 151 ----------------GVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQL 193
Query: 324 TGPPPDVLWSMPQLRLLDISRN 345
P S+ +L++L + N
Sbjct: 194 KRVPEGAFDSLEKLKMLQLQEN 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C E +V++YM +GDL+ L R + L +
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDV 150
Query: 634 ----LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685
L L +A A G+ YL L FVHRD+ + L+ V++G
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 49/259 (18%)
Query: 562 VIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V+ + L+ E L E++ S + H ++ L G+ + +L+ +Y P G +
Sbjct: 40 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYRE 98
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L +K + D+ ++ +IT L A LSY H + +HRD++ ++LL E++
Sbjct: 99 L-QKLSKFDEQRTATYITEL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELK 148
Query: 681 LGSLSEVCAQGGDAH--QSRITRLL----RLPQSSEQGSSGSLTATCPYDVYCFGKVLLE 734
+ G H SR T L LP +G D++ G + E
Sbjct: 149 IADF------GWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYE 198
Query: 735 LVTGKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVA 794
+ GK A++ Y Y + + P + + A +++
Sbjct: 199 FLVGKPPFEANT-------------YQETYKRISRVEFTFPDFVTEG-------ARDLIS 238
Query: 795 RSCLNPKPTRRPLMRYILK 813
R L P++RP++R +L+
Sbjct: 239 R-LLKHNPSQRPMLREVLE 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-STRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 116 EL------ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 210
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 211 -YQDTYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 256
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 127 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 183
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI-SASSDAQVKEILE 755
TR P+ QG+ S+ + D++ G L+E+ G+ I S S + E+L+
Sbjct: 184 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLD 236
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 37/253 (14%)
Query: 562 VIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V+ + L+ E L E++ S + H ++ L G+ + +L+ +Y P G +
Sbjct: 43 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYRE 101
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L +K + D+ ++ +IT L A LSY H + +HRD++ ++LL E++
Sbjct: 102 L-QKLSKFDEQRTATYITEL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELK 151
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
+ + L LP +G D++ G + E + GK
Sbjct: 152 IADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKP 207
Query: 741 GISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNP 800
A++ Y Y + + P + + A +++R L
Sbjct: 208 PFEANT-------------YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKH 246
Query: 801 KPTRRPLMRYILK 813
P++RP++R +L+
Sbjct: 247 NPSQRPMLREVLE 259
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 27/219 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F + L+++ + ++ L + IKR D A+ E +++ V
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSD------SAFFWEERDIMAFANSPWVV 137
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + + + ++V +YMP GDL + + E W + A L +
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAEVVLA--LDAI 189
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQS----- 708
H ++ F+HRDV+ ++LLD ++L C + R + P
Sbjct: 190 H---SMGFIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 709 -SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASS 746
QG G C D + G L E++ G A S
Sbjct: 246 LKSQGGDGYYGREC--DWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 117 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL 167
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 211
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 212 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 119
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 120 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 170
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 214
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 215 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 114
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 115 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 165
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 209
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 210 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 255
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 104
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 105 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 156
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDF 183
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 27/219 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F + L+++ + ++ L + IKR D A+ E +++ V
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSD------SAFFWEERDIMAFANSPWVV 137
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + + + ++V +YMP GDL + + E W + A L +
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAEVVLA--LDAI 189
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQS----- 708
H ++ F+HRDV+ ++LLD ++L C + R + P
Sbjct: 190 H---SMGFIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 709 -SEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASS 746
QG G C D + G L E++ G A S
Sbjct: 246 LKSQGGDGYYGREC--DWWSVGVFLYEMLVGDTPFYADS 282
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 78
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 79 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 130
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDF 157
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 81
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 82 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 133
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDF 160
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 132
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 133 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 183
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 227
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 228 -YQETYKRISRVEFTFPDFVTE-------GARDLISR-LLKHNPSQRPMLREVLE 273
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
++F + ++L G F L + +GDL+ + V+ K + LQ E + E
Sbjct: 23 DNFEFIRVLG-KGSFGKVMLARVKETGDLY------AVKVLKKDVILQDDDVECTMTEKR 75
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S + + L C + + F V +++ GDL + +K+ D+ ++ + +
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEII 134
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
A L +LH + ++RD++ ++LLD + +L +C +G
Sbjct: 135 SA------LMFLHDKGI---IYRDLKLDNVLLDHEGHCKLADFG-MCKEG 174
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 121 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 215
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 216 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 261
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 79
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 80 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 131
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDF 158
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 169
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 213
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 214 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 259
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 40/268 (14%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRK------ 624
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 625 ------TNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678
N E+ L S D L + A+G+++L + +HRDV A ++LL +
Sbjct: 151 YSYNPSHNPEEQLSSRD---LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHV 204
Query: 679 VRLGSLSEVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
++G D++ + RLP + S T DV+ +G +L E+ +
Sbjct: 205 AKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
Query: 738 GKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSC 797
+G++ PY I K+V + + +I+ ++C
Sbjct: 264 --LGLN---------------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIM-QAC 305
Query: 798 LNPKPTRRPLMRYILKALENPLKVVREE 825
+PT RP + I L+ + R E
Sbjct: 306 WALEPTHRPTFQQICSFLQEQAQEDRRE 333
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 213
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 214 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 210
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 211 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 256
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 579 ELDFFSKVSHARLVPLLG-----HCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EL + H ++ LL ++ + +LV +M DL + + ED +Q
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQF 132
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693
L +GL Y+H +HRD++ ++ +++ E+++ +
Sbjct: 133 L--------VYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Query: 694 AHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA-QVKE 752
+TR R P+ + T D++ G ++ E++TGK S Q+KE
Sbjct: 182 MXGXVVTRWYRAPEVI----LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237
Query: 753 ILEQT 757
I++ T
Sbjct: 238 IMKVT 242
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 73
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 74 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 125
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDF 152
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 112
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 113 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 207
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 208 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 253
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 170 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 226
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
TR P+ QG+ S+ + D++ G L+E+ G+ I
Sbjct: 227 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPI 265
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 542 IKNGHSGDLF--RGILEGGIPVVIKRIDLQS---------VKTEAYLLELDFFSKVSHAR 590
I G G +F R + GG V +KR+ +Q+ ++ A L L+ F H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 591 LVPLLGHCM----ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+V L C +RE + LV++++ + DL++ L + +++ +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQL 129
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLR 704
GL +LH VHRD++ +IL+ +++L L+ + + +T R
Sbjct: 130 LRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 705 LPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA-QVKEILE 755
P+ Q S + P D++ G + E+ K SSD Q+ +IL+
Sbjct: 187 APEVLLQSSYAT-----PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 112 HLM-GADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 158
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCF 728
S++ +++ E+++ + TR R P+ + T D++
Sbjct: 159 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV----DIWSV 214
Query: 729 GKVLLELVTGK 739
G ++ EL+TG+
Sbjct: 215 GCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 112 HLM-GADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 158
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCF 728
S++ +++ E+++ + TR R P+ + T D++
Sbjct: 159 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV----DIWSV 214
Query: 729 GKVLLELVTGK 739
G ++ EL+TG+
Sbjct: 215 GCIMAELLTGR 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 48/241 (19%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH--Q 696
L A LSY H + +HRD++ ++LL E+++ G H
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF------GWSVHAPS 160
Query: 697 SRITRLL----RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKE 752
SR T L LP +G D++ G + E + GK A++
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------ 210
Query: 753 ILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYIL 812
Y Y + + P + + A +++R L P++RP++R +L
Sbjct: 211 -------YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVL 255
Query: 813 K 813
+
Sbjct: 256 E 256
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
DL +KTE ++ + H + L H +E N+ F+V +Y P G+L +
Sbjct: 51 DLPRIKTE-----IEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYII---- 100
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++D L + + + A ++Y+H + + HRD++ ++L D+ +++L
Sbjct: 101 SQDRLSEEETRVVFRQIVSA---VAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGL 154
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTG 738
G+ T L ++ + G DV+ G +L L+ G
Sbjct: 155 CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 542 IKNGHSGDLF--RGILEGGIPVVIKRIDLQS---------VKTEAYLLELDFFSKVSHAR 590
I G G +F R + GG V +KR+ +Q+ ++ A L L+ F H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 591 LVPLLGHCM----ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+V L C +RE + LV++++ + DL++ L + +++ +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQL 129
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLR 704
GL +LH VHRD++ +IL+ +++L L+ + + +T R
Sbjct: 130 LRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 705 LPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA-QVKEILE 755
P+ Q S + P D++ G + E+ K SSD Q+ +IL+
Sbjct: 187 APEVLLQSSYAT-----PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 215
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP +R +L+
Sbjct: 216 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPXLREVLE 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 213
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 214 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 259
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 118 HLM-GADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 164
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCF 728
S++ +++ E+++ + TR R P+ + T D++
Sbjct: 165 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV----DIWSV 220
Query: 729 GKVLLELVTGK 739
G ++ EL+TG+
Sbjct: 221 GCIMAELLTGR 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 210
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 211 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 117
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 118 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 168
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 212
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 213 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 117 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 211
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 212 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 171
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 215
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 216 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 87/220 (39%), Gaps = 31/220 (14%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARL 591
D + + G G+++RG +G + V I S +++ E + ++ V H +
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVKI----FSSRDEKSWFRETELYNTVMLRHENI 64
Query: 592 VPLLGHCMEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ + M + + +L+ Y G L L L +LD ++ L+I + A
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIAS 116
Query: 649 GLSYLHHEC-----TLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---- 699
GL++LH E HRD+++ +IL+ + + L +Q +
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 700 ---TRLLRLPQS-SEQGSSGSLTATCPYDVYCFGKVLLEL 735
T+ P+ E + D++ FG VL E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 166
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 210
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 211 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 210
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 211 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 256
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/247 (17%), Positives = 98/247 (39%), Gaps = 27/247 (10%)
Query: 529 LLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSH 588
++ G F L + +L+ I ++ K + +Q E ++E + +
Sbjct: 25 MVLGKGSFGKVMLADRKGTEELY------AIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ L C + + + V +Y+ GDL + ++ + Q++ + + I
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAAEISI------ 131
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQS 708
GL +LH ++RD++ +++LD + +++ D +R P
Sbjct: 132 GLFFLHKRGI---IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR--EFCGTPDY 186
Query: 709 SEQGSSGSLTATCPY----DVYCFGKVLLELVTGKMGISASSDAQV-KEILEQTLPYISI 763
+ + A PY D + +G +L E++ G+ + ++ + I+E + Y
Sbjct: 187 ----IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS 242
Query: 764 YDKELVT 770
KE V+
Sbjct: 243 LSKEAVS 249
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 55 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 111
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 112 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 163
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + + R + + + S + T + D + FG L E+ T
Sbjct: 164 ALPQNDDHYVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 164
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
TR P+ QG+ S+ + D++ G L+E+ G+ I
Sbjct: 165 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 135 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 191
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
TR P+ QG+ S+ + D++ G L+E+ G+ I
Sbjct: 192 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPI 230
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--AHQSR 698
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D A++
Sbjct: 111 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDEMANEFV 167
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
TR P+ QG+ S+ + D++ G L+E+ G+
Sbjct: 168 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGR 203
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDF 155
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 164
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
TR P+ QG+ S+ + D++ G L+E+ G+ I
Sbjct: 165 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 164
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
TR P+ QG+ S+ + D++ G L+E+ G+ I
Sbjct: 165 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPI 203
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 542 IKNGHSGDLF--RGILEGGIPVVIKRIDLQS---------VKTEAYLLELDFFSKVSHAR 590
I G G +F R + GG V +KR+ +Q+ ++ A L L+ F H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 591 LVPLLGHCM----ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+V L C +RE + LV++++ + DL++ L + +++ +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQL 129
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLR 704
GL +LH VHRD++ +IL+ +++L L+ + + +T R
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 705 LPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA-QVKEILE 755
P+ Q S + P D++ G + E+ K SSD Q+ +IL+
Sbjct: 187 APEVLLQSSYAT-----PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI- 699
K++I +GL+YL + + +HRDV+ S+IL++ + E++L V Q D+ +
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFV 164
Query: 700 -TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGI 742
TR P+ QG+ S+ + D++ G L+E+ G+ I
Sbjct: 165 GTRSYMSPERL-QGTHYSVQS----DIWSMGLSLVEMAVGRYPI 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E D +I
Sbjct: 91 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--------RIIRQV 141
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 142 LSGITYMHKN---KIVHRDLKPENLLLESK 168
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 169
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
L LP +G D++ G + E + GK A++
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKV----DLWSLGVLCYEFLVGKPPFEANT------------ 213
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
Y Y + + P + + A +++R L P++RP++R +L+
Sbjct: 214 -YQETYKRISRVEFTFPDFVTEG-------ARDLISR-LLKHNPSQRPMLREVLE 259
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 542 IKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHC 598
+ G G+++RG +G + V I S +++ E + ++ V H ++ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKI----FSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 599 MEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
M + + +L+ Y G L L L +LD ++ L+I + A GL++LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 656 EC-----TLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI-------TRLL 703
E HRD+++ +IL+ + + L +Q + T+
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 704 RLPQS-SEQGSSGSLTATCPYDVYCFGKVLLEL 735
P+ E + D++ FG VL E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 30/112 (26%)
Query: 287 SLQKFVIGNNFL----SGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLR---- 338
SL++ +G N L L ++F +S LQ++ L N PP V + LR
Sbjct: 452 SLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSL 511
Query: 339 ------------------LLDISRNNFTGPLPNSRSNVNTSTVELNISQNMF 372
+LDISRN P P +V S L+I+ N F
Sbjct: 512 NSNRLTVLSHNDLPANLEILDISRNQLLAPNP----DVFVSLSVLDITHNKF 559
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 542 IKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHC 598
+ G G+++RG +G + V I S +++ E + ++ V H ++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKI----FSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 599 MEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
M + + +L+ Y G L L L +LD ++ L+I + A GL++LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 656 EC-----TLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI-------TRLL 703
E HRD+++ +IL+ + + L +Q + T+
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 704 RLPQS-SEQGSSGSLTATCPYDVYCFGKVLLEL 735
P+ E + D++ FG VL E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G FS+ ++K +G ++ + ++ K L+ + + E D R +
Sbjct: 72 GAFSEVAVVKMKQTGQVY------AMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWIT 124
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + EN +LV +Y GDL + L + + ++ + +AI + L Y
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY- 183
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685
VHRD++ +ILLD +RL
Sbjct: 184 --------VHRDIKPDNILLDRCGHIRLADFG 207
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C E +V++YM +GDL+ L R + L +
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDV 127
Query: 634 ----LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L +A A G+ YL L FVHRD+ + L+ V++G
Sbjct: 128 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDF 179
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C E +V++YM +GDL+ L R + L +
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDV 121
Query: 634 ----LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L +A A G+ YL L FVHRD+ + L+ V++G
Sbjct: 122 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDF 173
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 31/270 (11%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTNTEDDLQSL--DWIT---RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSIL 672
S+ L K N + L D++T + + A+G+ +L + +HRD+ A +IL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 673 LDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKV 731
L +K V++ D R RLP + + T DV+ FG +
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 732 LLELVTGKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMA 791
L E+ + +G S ++ E + L KE T++ P E M
Sbjct: 236 LWEIFS--LGASPYPGVKIDEEFXRRL-------KE-GTRMRAPDYTTPE--------MY 277
Query: 792 IVARSCLNPKPTRRPLMRYILKALENPLKV 821
C + +P++RP +++ L N L+
Sbjct: 278 QTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E + K ID +S + E Y++E+D + H +V LL
Sbjct: 47 DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYY 105
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
EN +++ ++ G + + + + TE +Q + + L+YLH
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------VCKQTLDALNYLHDN--- 154
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLLRLPQSSEQGSSG 715
+HRD++A +IL +++L V A+ Q R T P+ +S
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFG-VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 716 SLTATCPYDVYCFGKVLLEL 735
DV+ G L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 117
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 118 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + + R + + + S + T + D + FG L E+ T
Sbjct: 170 ALPQNDDHYVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 55 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 111
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 112 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 163
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + + R + + + S + T + D + FG L E+ T
Sbjct: 164 ALPQNDDHYVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 107
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 108 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + + R + + + S + T + D + FG L E+ T
Sbjct: 160 ALPQNDDHYVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 456
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 457 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 508
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDF 535
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 107
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 108 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + + R + + + S + T + D + FG L E+ T
Sbjct: 160 ALPQNDDHYVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E + K ID +S + E Y++E+D + H +V LL
Sbjct: 47 DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYY 105
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
EN +++ ++ G + + + + TE +Q + + L+YLH
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------VCKQTLDALNYLHDN--- 154
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLLRLPQSSEQGSSG 715
+HRD++A +IL +++L V A+ Q R T P+ +S
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFG-VSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 716 SLTATCPYDVYCFGKVLLEL 735
DV+ G L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E + K ID +S + E Y++E+D + H +V LL
Sbjct: 47 DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYY 105
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
EN +++ ++ G + + + + TE +Q + + L+YLH
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------VCKQTLDALNYLHDN--- 154
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLLRLPQSSEQGSSG 715
+HRD++A +IL +++L V A+ Q R T P+ +S
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFG-VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 716 SLTATCPYDVYCFGKVLLEL 735
DV+ G L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 541 LIKNGHSGDLFRGILE--GGIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPL 594
+I G G++ G L+ G + + L+S TE +L E + H ++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
G + + ++ ++M NG L S L R+ + + + L + R G A G+ YL
Sbjct: 100 EG-VVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLR-----GIAAGMKYL- 151
Query: 655 HECTLPFVHRDVQASSILLD 674
+ +VHRD+ A +IL++
Sbjct: 152 --ADMNYVHRDLAARNILVN 169
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 456
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 457 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 508
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 509 SK---RFVHRDIAARNVLVSATDCVKLGDF 535
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 34.3 bits (77), Expect = 0.36, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
VI + ++ T L E++ K+ H ++ L +E + ++V + G+L +
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKLF-EILEDSSSFYIVGELYTGGELFDEI 112
Query: 622 Y-RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
RK +E D +I G++Y+H VHRD++ +ILL+ K
Sbjct: 113 IKRKRFSEHDAA--------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 34.3 bits (77), Expect = 0.36, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
VI + ++ T L E++ K+ H ++ L +E + ++V + G+L +
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKLF-EILEDSSSFYIVGELYTGGELFDEI 112
Query: 622 Y-RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
RK +E D +I G++Y+H VHRD++ +ILL+ K
Sbjct: 113 IKRKRFSEHDAA--------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.9 bits (76), Expect = 0.38, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 25/162 (15%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFS 584
+ +++ GDF +N E + K ID +S + E Y++E+D +
Sbjct: 13 FWEIIGELGDFGKVYKAQNK----------ETSVLAAAKVIDTKSEEELEDYMVEIDILA 62
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKI 642
H +V LL EN +++ ++ G + + + + TE +Q +
Sbjct: 63 SCDHPNIVKLL-DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------V 113
Query: 643 AIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ L+YLH +HRD++A +IL +++L
Sbjct: 114 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADF 152
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 561 VVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
++K+ + + + +E +L V H LV L + ++ + V Y+ G+L
Sbjct: 75 AILKKKEEKHIMSERNVL----LKNVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYH 129
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L R+ L+ R A A L YLH +L V+RD++ +ILLD + +
Sbjct: 130 LQRERCF------LEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIV 179
Query: 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPY----DVYCFGKVLLELV 736
L +C + + H S + P+ + + PY D +C G VL E++
Sbjct: 180 LTDFG-LCKENIE-HNSTTSTFCGTPEY----LAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 737 TG 738
G
Sbjct: 234 YG 235
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 556 EGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614
E G K I+ +S + E Y++E++ + H +V LLG + + +++ ++ P
Sbjct: 42 ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AYYHDGKLWIMIEFCPG 100
Query: 615 GDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSIL 672
G + + + + TE +Q + R + E L++LH + +HRD++A ++L
Sbjct: 101 GAVDAIMLELDRGLTEPQIQV---VCRQML-----EALNFLHSK---RIIHRDLKAGNVL 149
Query: 673 LDDKFEVRLGSL 684
+ + ++RL
Sbjct: 150 MTLEGDIRLADF 161
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 556 EGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614
E G K I+ +S + E Y++E++ + H +V LLG + + +++ ++ P
Sbjct: 34 ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AYYHDGKLWIMIEFCPG 92
Query: 615 GDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSIL 672
G + + + + TE +Q + R + E L++LH + +HRD++A ++L
Sbjct: 93 GAVDAIMLELDRGLTEPQIQV---VCRQML-----EALNFLHSK---RIIHRDLKAGNVL 141
Query: 673 LDDKFEVRLGSL 684
+ + ++RL
Sbjct: 142 MTLEGDIRLADF 153
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E+ S + H LV L E +NE ++Y++M G+L + + N + ++++++
Sbjct: 204 EIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 262
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
++ +GL ++H +VH D++ +I+ K
Sbjct: 263 QV------CKGLCHMHENN---YVHLDLKPENIMFTTK 291
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KIA+ + L +LH + L +HRDV+ S++L++ +V++ G L + A+ DA
Sbjct: 157 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 695 HQSRITRLLRL-PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA--SSDAQVK 751
R+ P+ +++G S D++ G ++EL + + + Q+K
Sbjct: 215 GCKPYMAPERINPELNQKGYS------VKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 268
Query: 752 EILEQTLPYI 761
+++E+ P +
Sbjct: 269 QVVEEPSPQL 278
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E KV+ +R V L + E ++ LV M GDL +Y
Sbjct: 232 LNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA--------G 282
Query: 637 ITRLKIAIGAAE---GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ AAE GL LH E V+RD++ +ILLDD +R+ L
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 558 GIPVVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
G V +K +DL+ + L E+ H +V + + E E +++ +++ G
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE-ELWVLMEFLQGGA 128
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L+ + + E+ + + + + L+YLH + +HRD+++ SILL
Sbjct: 129 LTDIVSQVRLNEEQIAT--------VCEAVLQALAYLHAQGV---IHRDIKSDSILLTLD 177
Query: 677 FEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ-SSEQGSSGSLTATCPYDVYCFGKVLLEL 735
V+L CAQ R L+ P + + S SL AT D++ G +++E+
Sbjct: 178 GRVKLSDFG-FCAQISKDVPKR-KXLVGTPYWMAPEVISRSLYAT-EVDIWSLGIMVIEM 234
Query: 736 VTGKMGISASSDAQVKEILEQTLP 759
V G+ + S Q + L + P
Sbjct: 235 VDGEPPYFSDSPVQAMKRLRDSPP 258
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E KV+ +R V L + E ++ LV M GDL +Y
Sbjct: 232 LNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA--------G 282
Query: 637 ITRLKIAIGAAE---GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ AAE GL LH E V+RD++ +ILLDD +R+ L
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 572 KTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT--- 627
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 628 -------------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
++D + L+ L + A+G+++L + +HRDV A ++LL
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLT 192
Query: 675 DKFEVRLGSL 684
+ ++G
Sbjct: 193 NGHVAKIGDF 202
>pdb|1JCN|A Chain A, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
pdb|1JCN|B Chain B, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
Length = 514
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 616 DLSSSLYRKTNTEDDLQS--LDWITRLKIAIGAA--EGLSYLHHECTLPFVHRDVQ 667
DL+S+L RK + L S +D +T +AI A G+ ++HH CT F +V+
Sbjct: 50 DLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVR 105
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 42/223 (18%)
Query: 550 LFRGILEGGIPVV--IKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607
L R IL G V I + L S + E+ ++H +V L +E E +L
Sbjct: 32 LARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLYL 90
Query: 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQ 667
V +Y G++ L ++ + + + + A + Y H + VHRD++
Sbjct: 91 VMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLK 140
Query: 668 ASSILLDDKFEVRLG------------SLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSG 715
A ++LLD +++ L E C P ++ + G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP--------------PYAAPELFQG 186
Query: 716 SLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 226
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KIA+ + L +LH + L +HRDV+ S++L++ +V++ G L + A+ DA
Sbjct: 113 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 695 HQSRITRLLRL-PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA--SSDAQVK 751
R+ P+ +++G S D++ G ++EL + + + Q+K
Sbjct: 171 GCKPYMAPERINPELNQKGYS------VKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 224
Query: 752 EILEQTLPYI 761
+++E+ P +
Sbjct: 225 QVVEEPSPQL 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTATC 721
+A ++LLD +++ A G +++ L P ++ + G
Sbjct: 140 KAENLLLDADMNIKI-------ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 722 PYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 21/238 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDL----QSVKTEAYL 577
E+ +Q L+ + + G G +++ G V +KRI L + + + A +
Sbjct: 12 ENLYFQGLMEK---YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-I 67
Query: 578 LELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E+ ++ H +V L+ + E LV+++M DL L D Q ++
Sbjct: 68 REISLLKELHHPNIVSLID-VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYL 125
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQS 697
+L G+++ H L HRD++ ++L++ ++L A G +S
Sbjct: 126 YQL------LRGVAHCHQHRIL---HRDLKPQNLLINSDGALKLADFGLARAFGIPV-RS 175
Query: 698 RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK-MGISASSDAQVKEIL 754
++ L + GS + D++ G + E++TGK + + D Q+ +I
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 21/238 (8%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDL----QSVKTEAYL 577
E+ +Q L+ + + G G +++ G V +KRI L + + + A +
Sbjct: 12 ENLYFQGLMEK---YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-I 67
Query: 578 LELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E+ ++ H +V L+ + E LV+++M DL L D Q ++
Sbjct: 68 REISLLKELHHPNIVSLID-VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYL 125
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQS 697
+L G+++ H L HRD++ ++L++ ++L A G +S
Sbjct: 126 YQL------LRGVAHCHQHRIL---HRDLKPQNLLINSDGALKLADFGLARAFGIPV-RS 175
Query: 698 RITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK-MGISASSDAQVKEIL 754
++ L + GS + D++ G + E++TGK + + D Q+ +I
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 278 VPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQL 337
VP EL + L + NN +S LS F ++QL ++L N PP + L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Query: 338 RLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFY 373
RLL + N+ + +P N ++ L I N Y
Sbjct: 105 RLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLY 139
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.5 bits (75), Expect = 0.53, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI----TRLL 703
+GL YLH E +HRD++A+++LL ++ +V+L V Q D R T
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFG-VAGQLTDTQIKRNXFVGTPFW 182
Query: 704 RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTLPYISI 763
P+ +Q S+ A D++ G +EL G+ +SD +L
Sbjct: 183 MAPEVIKQ-SAYDFKA----DIWSLGITAIELAKGE---PPNSDLHPMRVL--------- 225
Query: 764 YDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYILK 813
L+ K P+L E + + + A CLN P RP + +LK
Sbjct: 226 ---FLIPKNSPPTL---EGQHSKPFKEFVEA--CLNKDPRFRPTAKELLK 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTATC 721
+A ++LLD +++ A G +++ L P ++ + G
Sbjct: 140 KAENLLLDADMNIKI-------ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 722 PYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 117
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 118 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + R + + + S + T + D + FG L E+ T
Sbjct: 170 ALPQNDDHXVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 562 VIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V+ + L+ E L E++ S + H ++ L G+ + +L+ +Y P G +
Sbjct: 44 VLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYRE 102
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L +K + D+ ++ +IT L A LSY H + +HRD++ ++LL E++
Sbjct: 103 L-QKLSRFDEQRTATYITEL------ANALSYCHSKRV---IHRDIKPENLLLGSNGELK 152
Query: 681 LGSL 684
+
Sbjct: 153 IADF 156
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 107
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSE 686
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G L
Sbjct: 108 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 687 VCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVT 737
Q D + R + + + S + T + D + FG L E+ T
Sbjct: 160 ALPQNDDHXVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 25 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 82
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF-VHRD 665
LV +Y G++ D L + W+ + + +S + + C F VHRD
Sbjct: 83 LVMEYASGGEVF----------DYLVAHGWMKEKEARAKFRQIVSAVQY-CHQKFIVHRD 131
Query: 666 VQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTAT 720
++A ++LLD +++ A G +++ L P ++ + G
Sbjct: 132 LKAENLLLDADMNIKI-------ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 721 CPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 618 SSSLYRKTN------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQA 668
S+ L K N T +DL D++T + + A+G+ +L + +HRD+ A
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 669 SSILLDDKFEVRL 681
+ILL +K V++
Sbjct: 177 RNILLSEKNVVKI 189
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+S+N+ S
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 508
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 111 NLASLENFPI--GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTATC 721
+A ++LLD +++ A G +++ L P ++ + G
Sbjct: 140 KAENLLLDADMNIKI-------ADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 722 PYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 226
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+S+N+ S
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 135 NLASLENFPI--GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 562 VIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V+ + L+ E L E++ S + H ++ L G+ + +L+ +Y P G +
Sbjct: 44 VLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYRE 102
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
L +K + D+ ++ +IT L A LSY H + +HRD++ ++LL E++
Sbjct: 103 L-QKLSRFDEQRTATYITEL------ANALSYCHSKRV---IHRDIKPENLLLGSNGELK 152
Query: 681 LGSL 684
+
Sbjct: 153 IADF 156
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 282 LRGLRSLQKFVI-GNNFLSGNLS-VNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRL 339
L GL+ L+ + GN+F G++S NL V L+I++L + +
Sbjct: 444 LAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNH 503
Query: 340 LDISRNNFTGPLPNSRSNVNTSTVELNISQN---MFYGGLTPVLGRFRLVDLSGN 391
LD+S N+ TG ++ S++ + LN++ N + L P L + +++LS N
Sbjct: 504 LDLSHNSLTGDSMDALSHL--KGLYLNMASNNIRIIPPHLLPALSQQSIINLSHN 556
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E+ S + H LV L E +NE ++Y++M G+L + + N + ++++++
Sbjct: 98 EIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 156
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
++ +GL ++H +VH D++ +I+ K
Sbjct: 157 QV------CKGLCHMHENN---YVHLDLKPENIMFTTK 185
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+S+N+ S
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E D +I
Sbjct: 109 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--------RIIRQV 159
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 160 LSGITYMHKN---KIVHRDLKPENLLLESK 186
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQ 696
+++ A + L++ H +HRDV+ ++IL+ V++ G + G Q
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEIL 754
+ S EQ S+ A DVY G VL E++TG+ + S V + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 755 EQTLP 759
E +P
Sbjct: 234 EDPIP 238
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E D +I
Sbjct: 108 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--------RIIRQV 158
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 159 LSGITYMHKN---KIVHRDLKPENLLLESK 185
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 17 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 72
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 124
Query: 656 ECTL-----PFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILV 147
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+++N L S
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 111 NLASLENFPI--GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 618 SSSLYRKTN-----TEDDLQSLDWIT---RLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669
S+ L K N +DL D++T + + A+G+ +L + +HRD+ A
Sbjct: 122 STYLRSKRNEFVPYKPEDLYK-DFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAAR 177
Query: 670 SILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDVYC 727
+ILL +K V++ L+ + D + RL + E + T DV+
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE--TIFDRVYTIQSDVWS 235
Query: 728 FGKVLLELVTGKMGISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEV 787
FG +L E+ + +G S ++ E + L KE T++ P E
Sbjct: 236 FGVLLWEIFS--LGASPYPGVKIDEEFCRRL-------KE-GTRMRAPDYTTPE------ 279
Query: 788 WAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREEN 826
M C + +P++RP +++ L N L+ +++
Sbjct: 280 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 37 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 92
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 144
Query: 656 ECTL-----PFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILV 167
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 50 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 105
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 157
Query: 656 ECTL-----PFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILV 180
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.1 bits (74), Expect = 0.79, Method: Composition-based stats.
Identities = 60/294 (20%), Positives = 119/294 (40%), Gaps = 45/294 (15%)
Query: 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFF 583
F +++ L +G F D +L++ SG LE I + K D V E E++
Sbjct: 24 FIFKRKLG-SGAFGDVHLVEERSSG------LERVIKTINK--DRSQVPMEQIEAEIEVL 74
Query: 584 SKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIA 643
+ H ++ + E + ++V + G+L L R + + ++L ++
Sbjct: 75 KSLDHPNIIKIF-EVFEDYHNMYIVMETCEGGEL---LERIVSAQARGKALSEGYVAELM 130
Query: 644 IGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-----FEVRLGSLSEVCAQGGDAHQSR 698
L+Y H + VH+D++ +IL D ++ L+E+ + +
Sbjct: 131 KQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA 187
Query: 699 ITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
T L P+ ++ +T C D++ G V+ L+TG + + +S +V++
Sbjct: 188 GTALYMAPEVFKR----DVTFKC--DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE 241
Query: 759 PYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPKPTRRPLMRYIL 812
P ++ + L + V DLL+++ L P RRP +L
Sbjct: 242 PNYAVECRPLTPQAV--------DLLKQM----------LTKDPERRPSAAQVL 277
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E D +I
Sbjct: 85 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--------RIIRQV 135
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESK 162
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA-QGGDAHQSRITRLLRLPQ 707
GL ++H+ V+RD++ ++ILLD+ VR+ L C H S T P+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
++G + +A D + G +L +L+ G EI TL
Sbjct: 361 VLQKGVAYDSSA----DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA-QGGDAHQSRITRLLRLPQ 707
GL ++H+ V+RD++ ++ILLD+ VR+ L C H S T P+
Sbjct: 303 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 359
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
++G + +A D + G +L +L+ G EI TL
Sbjct: 360 VLQKGVAYDSSA----DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 34/264 (12%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT-ED 629
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK+ E
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 630 D----LQSLDWITR--LKIAIGAAEGLSYLHHE-CTLPFVHRDVQASSILLDDKFEVRLG 682
D + + TR L + A+G+++L + C +HRDV A ++LL + ++G
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 206
Query: 683 SLSEVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMG 741
D++ + RLP + S T DV+ +G +L E+ + +G
Sbjct: 207 DFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--LG 263
Query: 742 ISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPK 801
++ PY I K+V + + +I+ ++C +
Sbjct: 264 LN---------------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIM-QACWALE 307
Query: 802 PTRRPLMRYILKALENPLKVVREE 825
PT RP + I L+ + R E
Sbjct: 308 PTHRPTFQQICSFLQEQAQEDRRE 331
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA-QGGDAHQSRITRLLRLPQ 707
GL ++H+ V+RD++ ++ILLD+ VR+ L C H S T P+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
++G + +A D + G +L +L+ G EI TL
Sbjct: 361 VLQKGVAYDSSA----DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA-QGGDAHQSRITRLLRLPQ 707
GL ++H+ V+RD++ ++ILLD+ VR+ L C H S T P+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
++G + +A D + G +L +L+ G EI TL
Sbjct: 361 VLQKGVAYDSSA----DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 34/264 (12%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT-ED 629
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK+ E
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 630 D----LQSLDWITR--LKIAIGAAEGLSYLHHE-CTLPFVHRDVQASSILLDDKFEVRLG 682
D + + TR L + A+G+++L + C +HRDV A ++LL + ++G
Sbjct: 151 DPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 206
Query: 683 SLSEVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMG 741
D++ + RLP + S T DV+ +G +L E+ + +G
Sbjct: 207 DFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--LG 263
Query: 742 ISASSDAQVKEILEQTLPYISIYDKELVTKIVDPSLIIDEDLLEEVWAMAIVARSCLNPK 801
++ PY I K+V + + +I+ ++C +
Sbjct: 264 LN---------------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIM-QACWALE 307
Query: 802 PTRRPLMRYILKALENPLKVVREE 825
PT RP + I L+ + R E
Sbjct: 308 PTHRPTFQQICSFLQEQAQEDRRE 331
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 24/214 (11%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V IK ID L + E+ ++H +V L +E E +
Sbjct: 30 LARHILTGR-EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLY 87
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
L+ +Y G++ L ++ + ++ + + A + Y H + VHRD+
Sbjct: 88 LIMEYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDL 137
Query: 667 QASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATCPYD 724
+A ++LLD +++ S GG T P ++ + G D
Sbjct: 138 KAENLLLDADMNIKIADFGFSNEFTVGGKLD----TFCGSPPYAAPELFQGKKYDGPEVD 193
Query: 725 VYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
V+ G +L LV+G + + +KE+ E+ L
Sbjct: 194 VWSLGVILYTLVSGSLPFDGQN---LKELRERVL 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 32.7 bits (73), Expect = 0.94, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGSLSEVCAQGGDAHQSRI-TRLLRL 705
+GL +LH T P +HRD++ +I + V++G L + ++ I T
Sbjct: 140 KGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXA 198
Query: 706 PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA 748
P+ E+ S+ DVY FG LE T + S +A
Sbjct: 199 PEXYEEKYDESV------DVYAFGXCXLEXATSEYPYSECQNA 235
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 550 LFRGILEGGIPVV--IKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607
L R IL G V I + L S + E+ ++H +V L +E E +L
Sbjct: 32 LARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLYL 90
Query: 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQ 667
V +Y G++ L ++ + + + + A + Y H + VHRD++
Sbjct: 91 VMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLK 140
Query: 668 ASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTATCP 722
A ++LLD +++ A G +++ L P ++ + G
Sbjct: 141 AENLLLDADMNIKI-------ADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 723 YDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 226
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTNTEDDLQSL--DWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQASSIL 672
S+ L K N + L D++T + + A+G+ +L + +HRD+ A +IL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 673 LDDKFEVRL 681
L +K V++
Sbjct: 177 LSEKNVVKI 185
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 559 IPVVIKRIDLQSVKTEAYL----LELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614
I V IK I + + E L E+ S++SH +V ++ E ++ +LV +Y+
Sbjct: 37 IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI-DVDEEDDCYYLVMEYIEG 95
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
LS + D T + +G+ + H + VHRD++ +IL+D
Sbjct: 96 PTLSEYIESHGPLSVD-------TAINFTNQILDGIKHAH---DMRIVHRDIKPQNILID 145
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ--SSEQGSSGSLTATCPYDVYCFGKVL 732
+++ + + ++ +L Q S EQ + G T C D+Y G VL
Sbjct: 146 SNKTLKIFDFG-IAKALSETSLTQTNHVLGTVQYFSPEQ-AKGEATDECT-DIYSIGIVL 202
Query: 733 LELVTGK 739
E++ G+
Sbjct: 203 YEMLVGE 209
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 111 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 53 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 112
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 113 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R +L G V +K ID L + E+ ++H +V L +E E +
Sbjct: 33 LARHVLTGR-EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLY 90
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 91 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKY---IVHRDL 140
Query: 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTATC 721
+A ++LLD G ++ A G +++ + L P ++ + G
Sbjct: 141 KAENLLLD-------GDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 722 PYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 227
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 616 DLSSSLYRKTNTEDDLQS--LDWITRLKIAIGAA--EGLSYLHHECTLPFVHRDVQASSI 671
DL+S+L +K + L S +D +T +AI A G+ ++HH CT F QA+ +
Sbjct: 50 DLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPEF-----QANEV 104
Query: 672 LLDDKFE 678
K+E
Sbjct: 105 RKVKKYE 111
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 52 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 111
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 112 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 616 DLSSSLYRKTNTEDDLQS--LDWITRLKIAIGAA--EGLSYLHHECTLPFVHRDVQASSI 671
DL+S+L +K + L S +D +T +AI A G+ ++HH CT F QA+ +
Sbjct: 50 DLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPEF-----QANEV 104
Query: 672 LLDDKFE 678
K+E
Sbjct: 105 RKVKKYE 111
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 52 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 111
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 112 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 87/231 (37%), Gaps = 58/231 (25%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V IK ID L + E+ ++H +V L +E E +
Sbjct: 33 LARHILTGR-EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLY 90
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
L+ +Y G++ L ++ + ++ + + A + Y H + VHRD+
Sbjct: 91 LIMEYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDL 140
Query: 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTATC---PY 723
+A ++LLD +++ S+E G L A C PY
Sbjct: 141 KAENLLLDADMNIKIADFG---------------------FSNEFTVGGKLDAFCGAPPY 179
Query: 724 ----------------DVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA-EGLSYLHHECTLPF 661
+E +++Y+YM N + + + I +K I + SY+H+E +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI-- 173
Query: 662 VHRDVQASSILLDDKFEVRLGSLSE 686
HRDV+ S+IL+D V+L E
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGE 198
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQ 696
+++ A + L++ H +HRDV+ ++I++ V++ G + G Q
Sbjct: 136 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEIL 754
+ S EQ S+ A DVY G VL E++TG+ + S V + +
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 250
Query: 755 EQTLP 759
E +P
Sbjct: 251 EDPIP 255
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQ 696
+++ A + L++ H +HRDV+ ++I++ V++ G + G Q
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEIL 754
+ S EQ S+ A DVY G VL E++TG+ + S V + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 755 EQTLP 759
E +P
Sbjct: 234 EDPIP 238
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 53 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALET 112
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 113 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQ 696
+++ A + L++ H +HRDV+ ++I++ V++ G + G Q
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEIL 754
+ S EQ S+ A DVY G VL E++TG+ + S V + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 755 EQTLP 759
E +P
Sbjct: 234 EDPIP 238
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQ 696
+++ A + L++ H +HRDV+ ++I++ V++ G + G Q
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEIL 754
+ S EQ S+ A DVY G VL E++TG+ + S V + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 755 EQTLP 759
E +P
Sbjct: 234 EDPIP 238
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 561 VVIKRIDLQSVKT--EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618
V +K +D++ E E+ ++H +V GH E N ++L +Y G+L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-NIQYLFLEYCSGGELF 92
Query: 619 SSLYRKTNT-EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677
+ E D Q R + A G+ YLH + HRD++ ++LLD++
Sbjct: 93 DRIEPDIGMPEPDAQ------RFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERD 141
Query: 678 EVRLGSLSEVCAQGGDAHQSRITRLL-RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELV 736
+++ + + + ++ LP + + P DV+ G VL ++
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 737 TGKMGISASSDA 748
G++ SD+
Sbjct: 202 AGELPWDQPSDS 213
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
++QK +G N + L ++F V L ++VL +N + P + + P+L L +S N
Sbjct: 99 HTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNA 405
N + + TS L +S N R VDLS +P H+N
Sbjct: 158 NLER-IEDDTFQATTSLQNLQLSSN-----------RLTHVDLS------LIPSLFHANV 199
Query: 406 S 406
S
Sbjct: 200 S 200
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 561 VVIKRIDLQSVKT--EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618
V +K +D++ E E+ ++H +V GH E N ++L +Y G+L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-NIQYLFLEYCSGGELF 93
Query: 619 SSLYRKTNT-EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677
+ E D Q + G+ YLH + HRD++ ++LLD++
Sbjct: 94 DRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERD 142
Query: 678 EVRLGSLSEVCAQGGDAHQSRITRLL-RLPQSSEQGSSGSLTATCPYDVYCFGKVLLELV 736
+++ + + + ++ LP + + P DV+ G VL ++
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 737 TGKMGISASSDA 748
G++ SD+
Sbjct: 203 AGELPWDQPSDS 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 532 ATGDFSDANLIKNGHSGDLF-RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR 590
TG F L+K+ +G+ + IL+ V +K+I E L E V+
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-------EHTLNEKRILQAVNFPF 102
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
LV L + N ++V +YMP GD+ S L R+ + + + ++ +
Sbjct: 103 LVKLEFSFKDNSN-LYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLT------F 154
Query: 651 SYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YLH +L ++RD++ ++L+D + +++
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADF 185
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 561 VVIKRIDLQSVKTEAY-------LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613
V IK+I L ++EA L E+ ++SH ++ LL + N LV+ +M
Sbjct: 38 VAIKKIKLGH-RSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS-LVFDFME 95
Query: 614 NGDLSSSLYRKTN----TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669
DL + K N T +++ +T +GL YLH L HRD++ +
Sbjct: 96 T-DLEVII--KDNSLVLTPSHIKAYMLMT--------LQGLEYLHQHWIL---HRDLKPN 141
Query: 670 SILLDDKFEVRLGSLSEVCAQG----GDAHQSRITRLLRLPQSSEQGSSGSLTATCPYDV 725
++LLD+ ++L + G HQ +TR R P+ G+ D+
Sbjct: 142 NLLLDENGVLKLADFGLAKSFGSPNRAYXHQV-VTRWYRAPEL----LFGARMYGVGVDM 196
Query: 726 YCFGKVLLELVTGKMGISASSDA-QVKEILE 755
+ G +L EL+ + SD Q+ I E
Sbjct: 197 WAVGCILAELLLRVPFLPGDSDLDQLTRIFE 227
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 532 ATGDFSDANLIKNGHSGDLF-RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR 590
TG F L+K+ +G+ + IL+ V +K+I E L E V+
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-------EHTLNEKRILQAVNFPF 102
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
LV L + N ++V +YMP GD+ S L R+ + + + ++ +
Sbjct: 103 LVKLEFSFKDNSN-LYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLT------F 154
Query: 651 SYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YLH +L ++RD++ ++L+D + +++
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADF 185
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
VI + ++ T L E++ K+ H ++ L +E + ++V + G+L +
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKLF-EILEDSSSFYIVGELYTGGELFDEI 112
Query: 622 Y-RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
RK +E D +I G++Y+H VHRD++ +ILL+ K
Sbjct: 113 IKRKRFSEHDAA--------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEK----EARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRL-----PQSSEQGSSGSLTATC 721
+A ++LLD +++ A G +++ L P ++ + G
Sbjct: 140 KAENLLLDADXNIKI-------ADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 722 PYDVYCFGKVLLELVTGKMGISASSDAQVKEILEQTL 758
DV+ G +L LV+G + + +KE+ E+ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVL 226
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 52 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 106 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 157
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---TRLLRLPQS-S 709
H +HRD++ ++ L++ EV++G D + ++ T P+ S
Sbjct: 158 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
++G S + DV+ G ++ L+ GK
Sbjct: 215 KKGHSFEV------DVWSIGCIMYTLLVGK 238
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL---GSLSEVCAQGGDAHQ 696
+++ A + L++ H +HRDV+ ++I++ V++ G + G Q
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 697 SRITRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDAQV--KEIL 754
+ S EQ S+ A DVY G VL E++TG+ + S V + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR 233
Query: 755 EQTLP 759
E +P
Sbjct: 234 EDPIP 238
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
++QK +G N + L ++F V L ++VL +N + P + + P+L L +S N
Sbjct: 93 HTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 151
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNA 405
N + + TS L +S N R VDLS +P H+N
Sbjct: 152 NLER-IEDDTFQATTSLQNLQLSSN-----------RLTHVDLS------LIPSLFHANV 193
Query: 406 S 406
S
Sbjct: 194 S 194
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 212
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 213 ARNILLSEKNVVKI 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K+ + + L YL + + +HRDV+ S+ILLD++ +++L
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKL 166
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 50 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 104 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 155
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---TRLLRLPQS-S 709
H +HRD++ ++ L++ EV++G D + ++ T P+ S
Sbjct: 156 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 212
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
++G S + DV+ G ++ L+ GK
Sbjct: 213 KKGHSFEV------DVWSIGCIMYTLLVGK 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 771 KIVDPSLIIDEDLLEE--VWAMAIVARSCLNPKPTRRPLMRYILKALENPLKVVREENSG 828
K S II D+ E V A A+ A CLNP+ +P+ I++ + + + G
Sbjct: 219 KAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGG 278
Query: 829 SARLRTT--SSRGSWNAALFGSWRQSSSDVAAIP 860
S ++ + W + F S + P
Sbjct: 279 SETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFP 312
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECT-----LP 660
+LV Y +G L L R T T + + +K+A+ A GL++LH E
Sbjct: 78 WLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHMEIVGTQGKPA 129
Query: 661 FVHRDVQASSILL 673
HRD+++ +IL+
Sbjct: 130 IAHRDLKSKNILV 142
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECT-----LP 660
+LV Y +G L L R T T + + +K+A+ A GL++LH E
Sbjct: 77 WLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 661 FVHRDVQASSILL 673
HRD+++ +IL+
Sbjct: 129 IAHRDLKSKNILV 141
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECT-----LP 660
+LV Y +G L L R T T + + +K+A+ A GL++LH E
Sbjct: 80 WLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHMEIVGTQGKPA 131
Query: 661 FVHRDVQASSILL 673
HRD+++ +IL+
Sbjct: 132 IAHRDLKSKNILV 144
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 176 ARNILLSEKNVVKI 189
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 24/201 (11%)
Query: 208 TSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXX 267
T+F L LD+++ +L G +P G+ L+ L+ L +S N Q
Sbjct: 269 TTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFD-----QLCQISAANFP 322
Query: 268 XXXXXXXXGSVPSE------LRGLRSLQKFVIGNNFLSGNLSVNL-FPTVSQLQIIVLRQ 320
G+V L L +LQ + +N + + +L +S LQ + L
Sbjct: 323 SLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSH 382
Query: 321 NGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNS-------RSNVNTSTVELNISQNMFY 373
N G PQL LLD++ P S +N + L+ S
Sbjct: 383 NEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLL 442
Query: 374 GGLTPVLGRFRLVDLSGNYFE 394
GL PVL R ++L GN+F+
Sbjct: 443 AGL-PVL---RHLNLKGNHFQ 459
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 542 IKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCM 599
I G SG ++ + + G V I++++LQ K E + E+ + + +V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
+E ++V +Y+ G L+ + E + + + + L +LH
Sbjct: 88 -VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--------VCRECLQALEFLHSN--- 135
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRL----LRLPQSSEQGSSG 715
+HRD+++ +ILL V+L CAQ R T + P+ + + G
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFG-FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 716 SLTATCPYDVYCFGKVLLELVTGK 739
D++ G + +E++ G+
Sbjct: 195 P-----KVDIWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 84/200 (42%), Gaps = 16/200 (8%)
Query: 542 IKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCM 599
I G SG ++ + + G V I++++LQ K E + E+ + + +V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
+E ++V +Y+ G L+ + E + + + + L +LH
Sbjct: 88 -VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--------VCRECLQALEFLHSN--- 135
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTA 719
+HRD+++ +ILL V+L CAQ QS+ + ++ P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFG-FCAQ-ITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 720 TCPYDVYCFGKVLLELVTGK 739
D++ G + +E++ G+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 176 ARNILLSEKNVVKI 189
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 177
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 178 ARNILLSEKNVVKI 191
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 176 ARNILLSEKNVVKI 189
>pdb|3UX3|A Chain A, Crystal Structure Of Domain-Swapped Fam96a Minor Dimer
pdb|3UX3|B Chain B, Crystal Structure Of Domain-Swapped Fam96a Minor Dimer
Length = 130
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 566 IDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKT 625
+++Q + E YL+ + F V H L L+G C+ + ++ L +K+ +S +
Sbjct: 40 VEVQEINEEEYLVIIRFTPTVPHCSLATLIGLCLRVKLQRCLPFKHKLEIYISEGTH--- 96
Query: 626 NTEDDL 631
+TE+D+
Sbjct: 97 STEEDI 102
>pdb|3UX2|A Chain A, Crystal Structure Of Domain-Swapped Fam96a Major Dimer
Length = 130
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 566 IDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKT 625
+++Q + E YL+ + F V H L L+G C+ + ++ L +K+ +S +
Sbjct: 40 VEVQEINEEEYLVIIRFTPTVPHCSLATLIGLCLRVKLQRCLPFKHKLEIYISEGTH--- 96
Query: 626 NTEDDL 631
+TE+D+
Sbjct: 97 STEEDI 102
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 26 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 80 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 131
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---TRLLRLPQS-S 709
H +HRD++ ++ L++ EV++G D + ++ T P+ S
Sbjct: 132 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
++G S + DV+ G ++ L+ GK
Sbjct: 189 KKGHSFEV------DVWSIGCIMYTLLVGK 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 542 IKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCM 599
I G SG ++ + + G V I++++LQ K E + E+ + + +V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
+E ++V +Y+ G L+ + T T D + + R + L +LH
Sbjct: 89 -VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCR-----ECLQALEFLHSN--- 136
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTA 719
+HRD+++ +ILL V+L CAQ QS+ + ++ P
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFG-FCAQ-ITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 720 TCPYDVYCFGKVLLELVTGK 739
D++ G + +E++ G+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGE 214
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 84/200 (42%), Gaps = 16/200 (8%)
Query: 542 IKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCM 599
I G SG ++ + + G V I++++LQ K E + E+ + + +V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
+E ++V +Y+ G L+ + E + + + + L +LH
Sbjct: 88 -VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--------VCRECLQALEFLHSN--- 135
Query: 660 PFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGSLTA 719
+HRD+++ +ILL V+L CAQ QS+ + ++ P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFG-FCAQ-ITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 720 TCPYDVYCFGKVLLELVTGK 739
D++ G + +E++ G+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor
pdb|1DFJ|I Chain I, Ribonuclease Inhibitor Complexed With Ribonuclease A
Length = 457
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 138 GQQLPT--LQALDLRSCSIS----GVIPFSLGNLTNLTSLYLSDN 176
G Q PT +Q L L++CS++ GV+P +L +L L L+LSDN
Sbjct: 75 GLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDN 119
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KIA+ + L +LH + L +HRDV+ S++L++ +V+ G L + A+ DA
Sbjct: 140 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 695 HQSRITRLLRL-PQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISA--SSDAQVK 751
R+ P+ +++G S D++ G +EL + + + Q+K
Sbjct: 198 GCKPYXAPERINPELNQKGYS------VKSDIWSLGITXIELAILRFPYDSWGTPFQQLK 251
Query: 752 EILEQTLP 759
+++E+ P
Sbjct: 252 QVVEEPSP 259
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H + L E + +LV + G+L + RK +E + +I
Sbjct: 85 HPNIXKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--------VDAARIIRQV 135
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y H VHRD++ ++LL+ K
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESK 162
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEK--FLVYKYMPNGDLSSSLYRKTNTEDDL 631
E E+ K+ H +V L+ ++ NE ++V++ + G + K +ED
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLV-EVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-- 137
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA-Q 690
Q+ + L +G+ YLH++ +HRD++ S++L+ + +++ +
Sbjct: 138 QARFYFQDL------IKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 691 GGDAHQSRI--TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGK--------M 740
G DA S T P+S + + + + DV+ G L V G+ M
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSE--TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 741 GISASSDAQVKEILEQTLPYISIYDKELVTKIVD 774
+ + +Q E +Q P I+ K+L+T+++D
Sbjct: 247 CLHSKIKSQALEFPDQ--PDIAEDLKDLITRMLD 278
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 285 LRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISR 344
L L K + N L+G + N F S +Q + L +N + + QL+ L++
Sbjct: 53 LPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 345 NNFTGPLPNSRSNVNTSTVELNISQNMF 372
N + +P S ++N+ T LN++ N F
Sbjct: 112 NQISCVMPGSFEHLNSLT-SLNLASNPF 138
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC-----TLP 660
+L+ Y NG L Y K+ T LD + LK+A + GL +LH E
Sbjct: 111 YLITDYHENGSLYD--YLKSTT------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA 162
Query: 661 FVHRDVQASSILL 673
HRD+++ +IL+
Sbjct: 163 IAHRDLKSKNILV 175
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 579 ELDFFSKVSHARLVPLL-----GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EL + H ++ LL +E +E +LV M DL++ + + +++ +Q
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQF 135
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693
L + GL Y+H + +HRD++ S++ +++ E+R+ L A+ D
Sbjct: 136 LVY--------QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRI--LDFGLARQAD 182
Query: 694 AHQSRI--TRLLRLPQSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA--Q 749
+ TR R P+ + T D++ G ++ EL+ GK + SD Q
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLQGK-ALFPGSDYIDQ 237
Query: 750 VKEILE 755
+K I+E
Sbjct: 238 LKRIME 243
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI-TRLLRLPQ 707
GL Y+H + +HRD++ S++ +++ E+R+ + Q + + TR R P+
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG-LARQADEEMTGYVATRWYRAPE 190
Query: 708 SSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA--QVKEILE 755
+ T D++ G ++ EL+ GK + SD Q+K I+E
Sbjct: 191 IMLNWMHYNQTV----DIWSVGCIMAELLQGK-ALFPGSDYIDQLKRIME 235
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 32 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 86 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 137
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---TRLLRLPQS-S 709
H +HRD++ ++ L++ EV++G D + + T P+ S
Sbjct: 138 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 194
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
++G S + DV+ G ++ L+ GK
Sbjct: 195 KKGHSFEV------DVWSIGCIMYTLLVGK 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 541 LIKNGHSGDLFRGILE--GGIPVVIKRIDLQSVKTE----AYLLELDFFSKVSHARLVPL 594
+I G G++ RG L+ G + L+ TE +L E + H ++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
G + ++ ++M NG L S L R + + + L + R G A G+ YL
Sbjct: 83 EG-VVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLR-----GIASGMRYL- 134
Query: 655 HECTLPFVHRDVQASSILLD 674
+ +VHRD+ A +IL++
Sbjct: 135 --AEMSYVHRDLAARNILVN 152
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 28 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 82 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 133
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---TRLLRLPQS-S 709
H +HRD++ ++ L++ EV++G D + + T P+ S
Sbjct: 134 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
++G S + DV+ G ++ L+ GK
Sbjct: 191 KKGHSFEV------DVWSIGCIMYTLLVGK 214
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI--TRLLRLP 706
GL Y+H + +HRD++ S++ +++ E+R+ L A+ D + TR R P
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRI--LDFGLARQADEEMTGYVATRWYRAP 197
Query: 707 QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKMGISASSDA--QVKEILE 755
+ + T D++ G ++ EL+ GK + SD Q+K I+E
Sbjct: 198 EIMLNWMHYNQTV----DIWSVGCIMAELLQGK-ALFPGSDYIDQLKRIME 243
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY--RKTN-------- 626
L E + +V+H ++ L G C ++ L+ +Y G L L RK
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 627 -------TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
D ++L + A ++G+ YL + VHRD+ A +IL+ + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKM 189
Query: 680 RLGSLS---EVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLEL 735
++ +V + +S+ R+P + S T DV+ FG +L E+
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQG----RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 736 VT 737
VT
Sbjct: 246 VT 247
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 28 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 82 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 133
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI---TRLLRLPQS-S 709
H +HRD++ ++ L++ EV++G D + + T P+ S
Sbjct: 134 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 710 EQGSSGSLTATCPYDVYCFGKVLLELVTGK 739
++G S + DV+ G ++ L+ GK
Sbjct: 191 KKGHSFEV------DVWSIGCIMYTLLVGK 214
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 540 NLIKNGHSGDLFRGILE--GGIPVVIKRIDLQSVKTE----AYLLELDFFSKVSHARLVP 593
+I G G++ RG L+ G + L+ TE +L E + H ++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L G + ++ ++M NG L S L R + + + L + R G A G+ YL
Sbjct: 80 LEG-VVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLR-----GIASGMRYL 132
Query: 654 HHECTLPFVHRDVQASSILLD 674
+ +VHRD+ A +IL++
Sbjct: 133 ---AEMSYVHRDLAARNILVN 150
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY--RKTN-------- 626
L E + +V+H ++ L G C ++ L+ +Y G L L RK
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 627 -------TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
D ++L + A ++G+ YL + VHRD+ A +IL+ + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKM 189
Query: 680 RLGSLS---EVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLEL 735
++ +V + +S+ R+P + S T DV+ FG +L E+
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQG----RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 736 VT 737
VT
Sbjct: 246 VT 247
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRLLRLP 706
+ Y H VHRD++ ++LLDD V++ LS + G S + P
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 176
Query: 707 QSSEQGSSGSLTATCPYDVYCFGKVLLELVTGKM 740
+ +G L A DV+ G VL ++ G++
Sbjct: 177 EV----INGKLYAGPEVDVWSCGIVLYVMLVGRL 206
>pdb|3LUF|A Chain A, Structure Of Probable Two-Component System Response
RegulatorGGDEF DOMAIN PROTEIN
pdb|3LUF|B Chain B, Structure Of Probable Two-Component System Response
RegulatorGGDEF DOMAIN PROTEIN
pdb|3MF4|A Chain A, Crystal Structure Of Putative Two-Component System
Response RegulatorGGDEF DOMAIN PROTEIN
pdb|3MF4|B Chain B, Crystal Structure Of Putative Two-Component System
Response RegulatorGGDEF DOMAIN PROTEIN
Length = 259
Score = 29.6 bits (65), Expect = 8.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 547 SGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE--LDFFSKVSHARL 591
SG+ + +LE G+PVVI D+ K EA+L LD+ K S L
Sbjct: 63 SGEAVKVLLERGLPVVILTADISEDKREAWLEAGVLDYVXKDSRHSL 109
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTS 170
D LVNL L FN+++ +IP + +L L LDL + + + NL +LT
Sbjct: 54 DHLVNLQQLY-FNSNKLT---AIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTH 109
Query: 171 LYLSDN 176
+YL +N
Sbjct: 110 IYLYNN 115
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY--RKTN-------- 626
L E + +V+H ++ L G C ++ L+ +Y G L L RK
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 627 -------TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
D ++L + A ++G+ YL + VHRD+ A +IL+ + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKM 189
Query: 680 RLGSLS---EVCAQGGDAHQSRITRLLRLP-QSSEQGSSGSLTATCPYDVYCFGKVLLEL 735
++ +V + +S+ R+P + S T DV+ FG +L E+
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQG----RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 736 VT 737
VT
Sbjct: 246 VT 247
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTS 170
+A LTHL N S+ L GSI + + L L+ LDL I + S L NL
Sbjct: 317 NAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKE 375
Query: 171 LYLSDNGL 178
L L N L
Sbjct: 376 LALDTNQL 383
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,325,960
Number of Sequences: 62578
Number of extensions: 864317
Number of successful extensions: 2901
Number of sequences better than 100.0: 576
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 505
Number of HSP's that attempted gapping in prelim test: 2268
Number of HSP's gapped (non-prelim): 766
length of query: 919
length of database: 14,973,337
effective HSP length: 108
effective length of query: 811
effective length of database: 8,214,913
effective search space: 6662294443
effective search space used: 6662294443
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)